RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NSUN6 (Homo sapiens)

Ensembl gene IDs: ENSG00000241058

Ensembl transcript IDs: ENST00000377304.7, ENST00000414939.1, ENST00000449529.1, ENST00000456217.5, ENST00000493816.1, ENST00000606425.2

Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp TCCATGTCAGTGTCCGGTAATGGCACAGCCGATGGATCAAATCGCTaGAGCTGTTTCAACTGTTCACATGAGAGCCCAGCTCCCCTCATT +
Preference number: 5 (lower is better)
Translates to: SMSVSGNGTADGSNR*SCFNCSHESPAPLI
Trigger: AATGAGGGGAGCTGGGCTCTCATGTGAACAGTTGAAACAGCTGCAGCGATTTGATCCATCGGCTGTGCCATTACCGGACACTGACATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377304.7
CDS GCA 90 bp TTGCTCCTCCGTCAACTGGTTTCAAGGACATTCAGTTTCGTTTCATaGCAGGCTGTGAAGCTTTTCTTTTCAATGCTAGAACCGCAAATT +
Preference number: 5 (lower is better)
Translates to: LLLRQLVSRTFSFVS*QAVKLFFSMLEPQI
Trigger: AATTTGCGGTTCTAGCATTGAAAAGAAAAGCTTCACAGCCTGGCATGAAACGAAACTGAATGTCCTTGAAACCAGTTGACGGAGGAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414939.1
CDS TCA 90 bp TTTGTAAAAATAAGTAACGGGGCAGTACACTGTCAAATGAAGGGCTaGGATATACTGGTTCTGTCATTCTTATGCCCATGCCTTTCAGTT +
Preference number: 5 (lower is better)
Translates to: FVKISNGAVHCQMKG*DILVLSFLCPCLSV
Trigger: AACTGAAAGGCATGGGCATAAGAATGACAGAACCAGTATATCTCAGCCCTTCATTTGACAGTGTACTGCCCCGTTACTTATTTTTACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377304.7
CDS CCA 72 bp ATCCTTCCCACCGCAAATTCCCAGCCGCTGGCCGTTTaGGACTCTCCTACCGGAAGTGAAACCGAAGAAAAC +
Preference number: 6 (lower is better)
Translates to: ILPTANSQPLAV*DSPTGSETEEN
Trigger: GTTTTCTTCGGTTTCACTTCCGGTAGGAGAGTCCCAAACGGCCAGCGGCTGGGAATTTGCGGTGGGAAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449529.1
CDS GCA 72 bp GTGTCCGGTAATGGCACAGCCGATGGATCAAATCGCTaGAGCTGTTTCAACTGTTCACATGAGAGCCCAGCT +
Preference number: 6 (lower is better)
Translates to: VSGNGTADGSNR*SCFNCSHESPA
Trigger: AGCTGGGCTCTCATGTGAACAGTTGAAACAGCTGCAGCGATTTGATCCATCGGCTGTGCCATTACCGGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377304.7
CDS CCA 72 bp TGCCACTTCCTTCACAGACCAAGTACAGGCCATGTTTaGTCTCTGTCCCATTCCACTACAGGGTGCATCCAG +
Preference number: 6 (lower is better)
Translates to: CHFLHRPSTGHV*SLSHSTTGCIQ
Trigger: CTGGATGCACCCTGTAGTGGAATGGGACAGAGACCAAACATGGCCTGTACTTGGTCTGTGAAGGAAGTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377304.7
CDS CAA 90 bp CTCCAATCTGCGGTTCCTGGGGCTGAAGCTGAAGGCAAGGAAATTTaGTCAGGGCCCAGGCAACCTGTTCTTCATTTTCGGCCAGTGTTA +
Preference number: 6 (lower is better)
Translates to: LQSAVPGAEAEGKEI*SGPRQPVLHFRPVL
Trigger: TAACACTGGCCGAAAATGAAGAACAGGTTGCCTGGGCCCTGACAAAATTTCCTTGCCTTCAGCTTCAGCCCCAGGAACCGCAGATTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377304.7
ENST00000493816.1
CDS GCA 72 bp ACTGTTGCCAGACTTAAATCCCTCGCTGCTTTATCTTaGTCGTATCCTTCCCACCGCAAATTCCCAGCCGCT +
Preference number: 6 (lower is better)
Translates to: TVARLKSLAALS*SYPSHRKFPAA
Trigger: AGCGGCTGGGAATTTGCGGTGGGAAGGATACGAGCAAGATAAAGCAGCGAGGGATTTAAGTCTGGCAACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449529.1
CDS CCA 72 bp TGTTATAGTGCACGTGCTATAAACCAGCACACCCTCTaGCTTCAGCAGCTGAACCGCTGCAGTGAAGAGTTT +
Preference number: 6 (lower is better)
Translates to: CYSARAINQHTL*LQQLNRCSEEF
Trigger: AAACTCTTCACTGCAGCGGTTCAGCTGCTGAAGCCAGAGGGTGTGCTGGTTTATAGCACGTGCACTATAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377304.7
CDS CAA 90 bp GCTGATATGATGCCACTTCCTTCACAGACCAAGTACAGGCCATGTTaGGTCTCTGTCCCATTCCACTACAGGGTGCATCCAGAAGAATTC +
Preference number: 6 (lower is better)
Translates to: ADMMPLPSQTKYRPC*VSVPFHYRVHPEEF
Trigger: GAATTCTTCTGGATGCACCCTGTAGTGGAATGGGACAGAGACCAAACATGGCCTGTACTTGGTCTGTGAAGGAAGTGGCATCATATCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377304.7
CDS CAA 72 bp CTTCTCCCTGATCATGCATTAGTGCTGCAATGTGTGTaGTTTTCCCTCCAGGTGCTGCACACAAGTCTAGAA +
Preference number: 6 (lower is better)
Translates to: LLPDHALVLQCV*FSLQVLHTSLE
Trigger: TTCTAGACTTGTGTGCAGCACCTGGAGGGAAAACAACACACATTGCAGCACTAATGCATGATCAGGGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377304.7
CDS TCA 72 bp GCAATGTTTTCTGGTAGAGATGCTCATGGAAATCACTaGGCCAATGCCACGAGAACTTCCCATTTTTCTTGC +
Preference number: 6 (lower is better)
Translates to: AMFSGRDAHGNH*ANATRTSHFSC
Trigger: GCAAGAAAAATGGGAAGTTCTCGTGGCATTGGCTCAGTGATTTCCATGAGCATCTCTACCAGAAAACATTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456217.5
CDS GCA 72 bp ACTGTTGCCAGACTTAAATCCCTCGCTGCTTTATCTTaGTCGTATCCTTCCCACCTAAGAAAGGAACAAACA +
Preference number: 6 (lower is better)
Translates to: TVARLKSLAALS*SYPSHLRKEQT
Trigger: TGTTTGTTCCTTTCTTAGGTGGGAAGGATACGAGCAAGATAAAGCAGCGAGGGATTTAAGTCTGGCAACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606425.2
CDS TCA 72 bp GCAATGTTTTCTGGTAGAGATGCTCATGGAAATCACTaGGCCAATGCCACTCACGTTGCAAAGAACCAAAAA +
Preference number: 6 (lower is better)
Translates to: AMFSGRDAHGNH*ANATHVAKNQK
Trigger: TTTTTGGTTCTTTGCAACGTGAGTGGCATTGGCTCAGTGATTTCCATGAGCATCTCTACCAGAAAACATTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377304.7
CDS TCA 72 bp TTCTTATGCCCATGCCTTTCAGTTCAGGTAATCCACTaGAGATTTCTTTGCGGCTTAGTTCAGAAATCCCAT +
Preference number: 6 (lower is better)
Translates to: FLCPCLSVQVIH*RFLCGLVQKSH
Trigger: ATGGGATTTCTGAACTAAGCCGCAAAGAAATCTTCAGTGGATTACCTGAACTGAAAGGCATGGGCATAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377304.7
CDS CAA 72 bp CTTGCTCGTATCCTTCCCACCTTTAATGTTGTAACGTaGGAGCATATTATCCTGCATCTAAGTCTTAAAGGG +
Preference number: 6 (lower is better)
Translates to: LARILPTFNVVT*EHIILHLSLKG
Trigger: CCCTTTAAGACTTAGATGCAGGATAATATGCTCCAACGTTACAACATTAAAGGTGGGAAGGATACGAGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414939.1