RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NSUN4 (Homo sapiens)

Ensembl gene IDs: ENSG00000117481

Ensembl transcript IDs: ENST00000307089.7, ENST00000469918.5, ENST00000472157.1, ENST00000474844.5, ENST00000474844.6, ENST00000475281.1, ENST00000486270.5, ENST00000495427.1, ENST00000498008.5, ENST00000537428.2

Found 890 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTTCCCCCAGGAGCTGCACATAGGTCAAGCACGATGTCCCCAGGCTaGAGGCCGAGGGCCAGAACAGGCAGCAAGGAGGCAGCATCCATC +
Preference number: 1 (lower is better)
Translates to: FPPGAAHRSSTMSPG*RPRARTGSKEAASI
Trigger: GATGGATGCTGCCTCCTTGCTGCCTGTTCTGGCCCTCGGCCTGCAGCCTGGGGACATCGTGCTTGACCTATGTGCAGCTCCTGGGGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR CCA 90 bp AGTGAAGCATCGAAGGTTCGGACTGCAGGCCCAGGAGGCAGGGGATaGGGCTGCAGATTGGCCACCCTCAGACTGCAGTTCCCAGTGGGA +
Preference number: 1 (lower is better)
Translates to: SEASKVRTAGPGGRG*GCRLATLRLQFPVG
Trigger: TCCCACTGGGAACTGCAGTCTGAGGGTGGCCAATCTGCAGCCCCATCCCCTGCCTCCTGGGCCTGCAGTCCGAACCTTCGATGCTTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
3UTR TCA 90 bp CGCTCCTTCTTCCTTGACCGCTTAAAGATGTTGTTCTCCTCCTCATaGAGGGAGTGGCGGTCTGTGGTACAGGGCACATCCACCAGCACC +
Preference number: 1 (lower is better)
Translates to: RSFFLDRLKMLFSSS*REWRSVVQGTSTST
Trigger: GGTGCTGGTGGATGTGCCCTGTACCACAGACCGCCACTCCCTTCATGAGGAGGAGAACAACATCTTTAAGCGGTCAAGGAAGAAGGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR CCA 90 bp GACACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTaGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCT +
Preference number: 1 (lower is better)
Translates to: DTNRMETGPRVHLCH*SQFPVSGASNRVYP
Trigger: AGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307089.7
ENST00000474844.5
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
3UTR TCA 90 bp GTCATAGGTGTCCCCCTCCAGTTCTCCCCATTTCCTGCCATCCCATaGGGTAACTCGAACTTGATTTCCATCCCTGATCTCTTCAGGCAC +
Preference number: 1 (lower is better)
Translates to: VIGVPLQFSPFPAIP*GNSNLISIPDLFRH
Trigger: GTGCCTGAAGAGATCAGGGATGGAAATCAAGTTCGAGTTACCTCATGGGATGGCAGGAAATGGGGAGAACTGGAGGGGGACACCTATGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR TCA 90 bp CCTGTTGGCTGCTCAAGACTGGTCAGGTGGAACTCACTTCAAGGGTaGCAGGGGCTCAGTAACTGGCTGGTACAAATGGAACTAATGGCA +
Preference number: 1 (lower is better)
Translates to: PVGCSRLVRWNSLQG*QGLSNWLVQMELMA
Trigger: TGCCATTAGTTCCATTTGTACCAGCCAGTTACTGAGCCCCTGTCACCCTTGAAGTGAGTTCCACCTGACCAGTCTTGAGCAGCCAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR GCA 90 bp CAGAAAGACACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTaGCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTA +
Preference number: 1 (lower is better)
Translates to: QKDTNRMETGPRVHL*HWSQFPVSGASNRV
Trigger: TACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTGTCTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307089.7
ENST00000474844.5
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
3UTR GCA 90 bp GAAAACTGCAGAAAGACACGAACAGGATGGAGACAGGACCGAGAGTaGATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCA +
Preference number: 1 (lower is better)
Translates to: ENCRKTRTGWRQDRE*ISATGPSFQFLVHP
Trigger: TGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTGTCTTTCTGCAGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307089.7
ENST00000474844.5
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
3UTR GCA 90 bp ATGAGGAGTGCACAAGTCGGTCCTGGTTGCTGCAGCTGGGATGCTTaGTATAGCTGGCAATCTTGTTACTATCTATGCCTTGCTCTGGCC +
Preference number: 1 (lower is better)
Translates to: MRSAQVGPGCCSWDA*YSWQSCYYLCLALA
Trigger: GGCCAGAGCAAGGCATAGATAGTAACAAGATTGCCAGCTATAGCAAGCATCCCAGCTGCAGCAACCAGGACCGACTTGTGCACTCCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR CCA 90 bp AGGTTTGAGGGTCATGCTGGGAGAGTTCCCAGACCCCAGAAAGGTTaGATAAGGAGGGCCCACAGAATCTTGAGGTGTGAACCAAAACAG +
Preference number: 1 (lower is better)
Translates to: RFEGHAGRVPRPQKG*IRRAHRILRCEPKQ
Trigger: CTGTTTTGGTTCACACCTCAAGATTCTGTGGGCCCTCCTTATCCAACCTTTCTGGGGTCTGGGAACTCTCCCAGCATGACCCTCAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR TCA 90 bp AAGCTGCACTTGCAGCACAGGCAATATCTGTCGCTCCTTCTTCCTTaGCCGCTTAAAGATGTTGTTCTCCTCCTCATGAAGGGAGTGGCG +
Preference number: 1 (lower is better)
Translates to: KLHLQHRQYLSLLLP*PLKDVVLLLMKGVA
Trigger: CGCCACTCCCTTCATGAGGAGGAGAACAACATCTTTAAGCGGTCAAGGAAGAAGGAGCGACAGATATTGCCTGTGCTGCAAGTGCAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR TCA 90 bp TTGCTCTGGCCCTCATTTCTTGTTATGGTGAGGACTCTTGCTCTGTaGCTTTTGCCTCGCTGGGACTCTTGCTCTGGCTCCTGCTATGTT +
Preference number: 1 (lower is better)
Translates to: LLWPSFLVMVRTLAL*LLPRWDSCSGSCYV
Trigger: AACATAGCAGGAGCCAGAGCAAGAGTCCCAGCGAGGCAAAAGTCACAGAGCAAGAGTCCTCACCATAACAAGAAATGAGGGCCAGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR GCA 90 bp AGAACTTTTGCTCTGGCCCTCATTTCTTGTTATGGTGAGGACTCTTaGTCTGTGACTTTTGCCTCGCTGGGACTCTTGCTCTGGCTCCTG +
Preference number: 1 (lower is better)
Translates to: RTFALALISCYGEDS*SVTFASLGLLLWLL
Trigger: CAGGAGCCAGAGCAAGAGTCCCAGCGAGGCAAAAGTCACAGAGCAAGAGTCCTCACCATAACAAGAAATGAGGGCCAGAGCAAAAGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR CCA 90 bp CTTCCACCTGTACCTGGATGCTGTATTGATTGGCCAGGAGCTCAATaGCACCTTGCACCACATACTCGTTCTGTAAGTGTGAGAGTGAGC +
Preference number: 1 (lower is better)
Translates to: LPPVPGCCIDWPGAQ*HLAPHTRSVSVRVS
Trigger: GCTCACTCTCACACTTACAGAACGAGTATGTGGTGCAAGGTGCCATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTACAGGTGGAAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR TCA 90 bp TGGTCTGGTCAGAACTTTTGCTCTGGCCCTCATTTCTTGTTATGGTaGGGACTCTTGCTCTGTGACTTTTGCCTCGCTGGGACTCTTGCT +
Preference number: 1 (lower is better)
Translates to: WSGQNFCSGPHFLLW*GLLLCDFCLAGTLA
Trigger: AGCAAGAGTCCCAGCGAGGCAAAAGTCACAGAGCAAGAGTCCTCACCATAACAAGAAATGAGGGCCAGAGCAAAAGTTCTGACCAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR CCA 90 bp GGAAGTGAGTCAGATCTTCCACCTGTACCTGGATGCTGTATTGATTaGCCAGGAGCTCAATGGCACCTTGCACCACATACTCGTTCTGTA +
Preference number: 1 (lower is better)
Translates to: GSESDLPPVPGCCID*PGAQWHLAPHTRSV
Trigger: TACAGAACGAGTATGTGGTGCAAGGTGCCATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTACAGGTGGAAGATCTGACTCACTTCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR CCA 90 bp AGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTaGTGCATCCAACAGAGTATACCCTTTGTATTCTTGCTTCAGGGA +
Preference number: 1 (lower is better)
Translates to: RTESASLPLVPVSSF*CIQQSIPFVFLLQG
Trigger: TCCCTGAAGCAAGAATACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307089.7
ENST00000474844.5
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
3UTR GCA 90 bp ACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTaGATCCAACAGAGTATACCCTTTGTATTCTTGCTTCAGGGATTG +
Preference number: 1 (lower is better)
Translates to: TESASLPLVPVSSFW*IQQSIPFVFLLQGL
Trigger: CAATCCCTGAAGCAAGAATACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307089.7
ENST00000474844.5
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
3UTR CCA 90 bp AGACTTCAGATGAGGAGTGCACAAGTCGGTCCTGGTTGCTGCAGCTaGGATGCTTGCTATAGCTGGCAATCTTGTTACTATCTATGCCTT +
Preference number: 1 (lower is better)
Translates to: RLQMRSAQVGPGCCS*DACYSWQSCYYLCL
Trigger: AAGGCATAGATAGTAACAAGATTGCCAGCTATAGCAAGCATCCCAGCTGCAGCAACCAGGACCGACTTGTGCACTCCTCATCTGAAGTCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR TCA 90 bp ACAACTTTATTGGCCAAATGCTTCTCCTATGTTTACAACTTAGTGTaGGCCTGCTCACTGGCTTCTCCTTCTAAGCCCCTAAGCGGGCAG +
Preference number: 1 (lower is better)
Translates to: TTLLAKCFSYVYNLV*ACSLASPSKPLSGQ
Trigger: CTGCCCGCTTAGGGGCTTAGAAGGAGAAGCCAGTGAGCAGGCTCACACTAAGTTGTAAACATAGGAGAAGCATTTGGCCAATAAAGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307089.7
ENST00000474844.5
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
3UTR GCA 90 bp TTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGAAAACTaGAGAAAGACACGAACAGGATGGAGACAGGACCGAGAGTGCATC +
Preference number: 1 (lower is better)
Translates to: LDSRTANLLLLIAEN*RKTRTGWRQDRECI
Trigger: GATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTGTCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307089.7
ENST00000474844.5
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
3UTR GCA 90 bp TGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTaGCGAAAACTGCAGAAAGACACGAACAGGATGGAGACAGGACCG +
Preference number: 1 (lower is better)
Translates to: CSTIGQQDSKSSTSY*RKLQKDTNRMETGP
Trigger: CGGTCCTGTCTCCATCCTGTTCGTGTCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307089.7
ENST00000474844.5
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
3UTR TCA 90 bp TCCCTAGCTACCTGTCATACACGAGGTCTGGGAATACCTGCTAGATaGATGAACAAAGAACAAGGCACGCACAAGAGTATGACGGTTTTG +
Preference number: 1 (lower is better)
Translates to: SLATCHTRGLGIPAR*MNKEQGTHKSMTVL
Trigger: CAAAACCGTCATACTCTTGTGCGTGCCTTGTTCTTTGTTCATTCATCTAGCAGGTATTCCCAGACCTCGTGTATGACAGGTAGCTAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR TCA 90 bp CATCCAACAGAGTATACCCTTTGTATTCTTGCTTCAGGGATTGGGTaGTACTATGTCAGCCTACGCATTTTGCAGAAGTACATGGGGCCA +
Preference number: 1 (lower is better)
Translates to: HPTEYTLCILASGIG*YYVSLRILQKYMGP
Trigger: TGGCCCCATGTACTTCTGCAAAATGCGTAGGCTGACATAGTATCACCCAATCCCTGAAGCAAGAATACAAAGGGTATACTCTGTTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR TCA 90 bp AGTAACTGGCTGGTACAAATGGAACTAATGGCATTTGCACTGACATaGAGTCCCCAACTGCAGCCCCAGGTCTATAGAGTTTCAACAACT +
Preference number: 1 (lower is better)
Translates to: SNWLVQMELMAFALT*SPQLQPQVYRVSTT
Trigger: AGTTGTTGAAACTCTATAGACCTGGGGCTGCAGTTGGGGACTTCATGTCAGTGCAAATGCCATTAGTTCCATTTGTACCAGCCAGTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR TCA 90 bp TGGTCCTTATGCACATGTGGACTGCACTGCAAAGTGCCTTTGGATTaGATCATCATGATCTATGTGAGGCATCCATCCTGGTTTTGGAAG +
Preference number: 1 (lower is better)
Translates to: WSLCTCGLHCKVPLD*IIMIYVRHPSWFWK
Trigger: CTTCCAAAACCAGGATGGATGCCTCACATAGATCATGATGATTCAATCCAAAGGCACTTTGCAGTGCAGTCCACATGTGCATAAGGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR CCA 90 bp GGTGCATCCAACAGAGTATACCCTTTGTATTCTTGCTTCAGGGATTaGGTGATACTATGTCAGCCTACGCATTTTGCAGAAGTACATGGG +
Preference number: 1 (lower is better)
Translates to: GASNRVYPLYSCFRD*VILCQPTHFAEVHG
Trigger: CCCATGTACTTCTGCAAAATGCGTAGGCTGACATAGTATCACCCAATCCCTGAAGCAAGAATACAAAGGGTATACTCTGTTGGATGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR CCA 90 bp ATGCTTGCTATAGCTGGCAATCTTGTTACTATCTATGCCTTGCTCTaGCCTAGATTTTTGGTCTGGTCAGAACTTTTGCTCTGGCCCTCA +
Preference number: 1 (lower is better)
Translates to: MLAIAGNLVTIYALL*PRFLVWSELLLWPS
Trigger: TGAGGGCCAGAGCAAAAGTTCTGACCAGACCAAAAATCTAGGCCAGAGCAAGGCATAGATAGTAACAAGATTGCCAGCTATAGCAAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR GCA 90 bp TTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTATTCTTaGTTCAGGGATTGGGTGATACTATGTCAGCCTACGCATTTTGCA +
Preference number: 1 (lower is better)
Translates to: FPVSGASNRVYPLYS*FRDWVILCQPTHFA
Trigger: TGCAAAATGCGTAGGCTGACATAGTATCACCCAATCCCTGAAGCAAGAATACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR CCA 90 bp AATCTTGTTACTATCTATGCCTTGCTCTGGCCTAGATTTTTGGTCTaGTCAGAACTTTTGCTCTGGCCCTCATTTCTTGTTATGGTGAGG +
Preference number: 1 (lower is better)
Translates to: NLVTIYALLWPRFLV*SELLLWPSFLVMVR
Trigger: CCTCACCATAACAAGAAATGAGGGCCAGAGCAAAAGTTCTGACCAGACCAAAAATCTAGGCCAGAGCAAGGCATAGATAGTAACAAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR CCA 90 bp GCTTTTGTGAATAGGGTTGCTATGAATATTCTTGTACACATCTCCTaGTGTACATGTATGAGTTTCTCTAGGATTTATCCCCAGTATTGG +
Preference number: 1 (lower is better)
Translates to: AFVNRVAMNILVHIS*CTCMSFSRIYPQYW
Trigger: CCAATACTGGGGATAAATCCTAGAGAAACTCATACATGTACACCAGGAGATGTGTACAAGAATATTCATAGCAACCCTATTCACAAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR-3UTR GCA 90 bp AGACAACATGGCCTCCTGGTTTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTGCAGGCAGGGGATGGGGCTaGAGATTGGCCACCCTCAGA +
Preference number: 2 (lower is better)
Translates to: RQHGLLVWWQGVQPQEAAGRGWG*RLATLR
Trigger: TCTGAGGGTGGCCAATCTGCAGCCCCATCCCCTGCC...TGCAGCTTCTTGCGGCTGGACTCCTTGCCACCAAACCAGGAGGCCATGTTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498008.5
3UTR-3UTR GCA 90 bp GGCCGAGGGCCAGAACAGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCCACAAGTCGGTCCTGGTTaGTGCAGCTGGGATGCTTGC +
Preference number: 2 (lower is better)
Translates to: GRGPEQAARRQHPSGSTPQVGPG*CSWDAC
Trigger: GCAAGCATCCCAGCTGCAGCAACCAGGACCGACTTG...TGGAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCTGTTCTGGCCCTCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CCA 90 bp TCGGGACGGGGAGAGATCATTGGCAGCAAGATTGCGGCAACAGCCAGTCTGAAGGGGAGTGGCGGTCTGTaGTACAGGGCACATCCACCA +
Preference number: 2 (lower is better)
Translates to: SGRGEIIGSKIAATASLKGSGGL*YRAHPP
Trigger: TGGTGGATGTGCCCTGTACCACAGACCGCCACTCCC...CTTCAGACTGGCTGTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp AAGGGAGTGGCGGTCTGTGGTACAGGGCACATCCACCAGCACCCGGTCATAGGTGCTCTGAGAGGAGACTaGCACGGATTGATGGCCAAA +
Preference number: 2 (lower is better)
Translates to: KGVAVCGTGHIHQHPVIGALRGD*HGLMAK
Trigger: TTTGGCCATCAATCCGTGTCAGTCTCCTCTCAGAGC...ACCTATGACCGGGTGCTGGTGGATGTGCCCTGTACCACAGACCGCCACTCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp CAGGCCGAGGGCCAGAACAGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCCAGGAGGGAAGCGACTaGTATCCCCTCTGTCAAAAG +
Preference number: 2 (lower is better)
Translates to: QAEGQNRQQGGSIHQVVLQEGSD*YPLCQK
Trigger: CTTTTGACAGAGGGGATATCAGTCGCTTCCCTCCTG...GAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCTGTTCTGGCCCTCGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
3UTR-3UTR GCA 90 bp ATCCCCTCTGTCAAAAGTGAAGCATCGAAGGTTCGGACTGCAGGCCCAGGAGGCTGGCCACCCTCAGACTaGAGTTCCCAGTGGGAGATG +
Preference number: 2 (lower is better)
Translates to: IPSVKSEASKVRTAGPGGWPPSD*SSQWEM
Trigger: CATCTCCCACTGGGAACTGCAGTCTGAGGGTGGCCA...GCCTCCTGGGCCTGCAGTCCGAACCTTCGATGCTTCACTTTTGACAGAGGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
3UTR-3UTR GCA 90 bp TCGGGACGGGGAGAGATCATTGGCAGCAAGATTGCGGCAACAGCCAGTCTGAAGTGGCCACCCTCAGACTaGAGTTCCCAGTGGGAGATG +
Preference number: 2 (lower is better)
Translates to: SGRGEIIGSKIAATASLKWPPSD*SSQWEM
Trigger: CATCTCCCACTGGGAACTGCAGTCTGAGGGTGGCCA...CTTCAGACTGGCTGTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
3UTR-3UTR CCA 90 bp CAGGCCGAGGGCCAGAACAGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCGGATCTTCTGTAGTCTaGCTATTCGGGACGGGGAGA +
Preference number: 2 (lower is better)
Translates to: QAEGQNRQQGGSIHQVVLGSSVV*LFGTGR
Trigger: TCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCC...GAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCTGTTCTGGCCCTCGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CCA 90 bp GGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTGGGAGTGGCGGTCTGTaGTACAGGGCACATCCACCA +
Preference number: 2 (lower is better)
Translates to: GWRQDRECISATGPSFQFGSGGL*YRAHPP
Trigger: TGGTGGATGTGCCCTGTACCACAGACCGCCACTCCC...AAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CCA 90 bp GGAGTGGCGGTCTGTGGTACAGGGCACATCCACCAGCACCCGGTCATAGGTGTCGGATGCTGTATTGATTaGCCAGGAGCTCAATGGCAC +
Preference number: 2 (lower is better)
Translates to: GVAVCGTGHIHQHPVIGVGCCID*PGAQWH
Trigger: GTGCCATTGAGCTCCTGGCCAATCAATACAGCATCC...GACACCTATGACCGGGTGCTGGTGGATGTGCCCTGTACCACAGACCGCCACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CCA 90 bp CAGCACCCGGTCATAGGTGTCCCCCTCCAGTTCTCCCCATTTCCTGCCATCCCAACGGGGAGAGATCATTaGCAGCAAGATTGCGGCAAC +
Preference number: 2 (lower is better)
Translates to: QHPVIGVPLQFSPFPAIPTGRDH*QQDCGN
Trigger: GTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGT...TGGGATGGCAGGAAATGGGGAGAACTGGAGGGGGACACCTATGACCGGGTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp CTGGCTATTCGGGACGGGGAGAGATCATTGGCAGCAAGATTGCGGCAACAGCCATTGTTCTCCTCCTCATaGAGGGAGTGGCGGTCTGTG +
Preference number: 2 (lower is better)
Translates to: LAIRDGERSLAARLRQQPLFSSS*REWRSV
Trigger: CACAGACCGCCACTCCCTTCATGAGGAGGAGAACAA...TGGCTGTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTCCCGAATAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp GGAGTGGCGGTCTGTGGTACAGGGCACATCCACCAGCACCCGGTCATAGGTGTCGAGACTGACACGGATTaGTGGCCAAAGATCTCCAAA +
Preference number: 2 (lower is better)
Translates to: GVAVCGTGHIHQHPVIGVETDTD*WPKISK
Trigger: TTTGGAGATCTTTGGCCATCAATCCGTGTCAGTCTC...GACACCTATGACCGGGTGCTGGTGGATGTGCCCTGTACCACAGACCGCCACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp TGTTGTTCTCCTCCTCATGAAGGGAGTGGCGGTCTGTGGTACAGGGCACATCCATCAGGTAGTACTCCATaGCACCCAGGCTGCCAGGTC +
Preference number: 2 (lower is better)
Translates to: CCSPPHEGSGGLWYRAHPSGSTP*HPGCQV
Trigger: GACCTGGCAGCCTGGGTGTCATGGAGTACTACCTGA...TGGATGTGCCCTGTACCACAGACCGCCACTCCCTTCATGAGGAGGAGAACAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486270.5
ENST00000498008.5
3UTR-3UTR GCA 90 bp GCAAGGAGTCCAGCCGCAAGAAGCTGCACTTGCAGCACAGGCAATATCTGTCGCCCGAGAGTGCATCTCTaGCACTGGTCCCAGTTTCCA +
Preference number: 2 (lower is better)
Translates to: ARSPAARSCTCSTGNICRPRVHL*HWSQFP
Trigger: TGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGG...GCGACAGATATTGCCTGTGCTGCAAGTGCAGCTTCTTGCGGCTGGACTCCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CCA 90 bp AGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCCATGACACCCAGGCTGCCGGATCTTCTGTAGTCTaGCTATTCGGGACGGGGAGA +
Preference number: 2 (lower is better)
Translates to: RQQGGSIHQVVLHDTQAAGSSVV*LFGTGR
Trigger: TCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCC...GGCAGCCTGGGTGTCATGGAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CCA 90 bp TCTCCTTCTAAGCCCCTAAGCGGGCAGCAAACTTTAGTACAGGCCTGGAGATGGGGGAGTGGCGGTCTGTaGTACAGGGCACATCCACCA +
Preference number: 2 (lower is better)
Translates to: SPSKPLSGQQTLVQAWRWGSGGL*YRAHPP
Trigger: TGGTGGATGTGCCCTGTACCACAGACCGCCACTCCC...CCATCTCCAGGCCTGTACTAAAGTTTGCTGCCCGCTTAGGGGCTTAGAAGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CCA 90 bp CGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGGGAGTGGCGGTCTGTaGTACAGGGCACATCCACCA +
Preference number: 2 (lower is better)
Translates to: RECISATGPSFQFLVHPTGSGGL*YRAHPP
Trigger: TGGTGGATGTGCCCTGTACCACAGACCGCCACTCCC...TGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CCA 90 bp TCTCCTTCTAAGCCCCTAAGCGGGCAGCAAACTTTAGTACAGGCCTGGAGATGGCATGGCCTCCTGGTTTaGTGGCAAGGAGTCCAGCCG +
Preference number: 2 (lower is better)
Translates to: SPSKPLSGQQTLVQAWRWHGLLV*WQGVQP
Trigger: CGGCTGGACTCCTTGCCACCAAACCAGGAGGCCATG...CCATCTCCAGGCCTGTACTAAAGTTTGCTGCCCGCTTAGGGGCTTAGAAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CCA 90 bp GGAGTGGCGGTCTGTGGTACAGGGCACATCCACCAGCACCCGGTCATAGGTGTCATTGGCCATGAGGTTTaGTATTACCAGCTCCCCAAC +
Preference number: 2 (lower is better)
Translates to: GVAVCGTGHIHQHPVIGVIGHEV*YYQLPN
Trigger: GTTGGGGAGCTGGTAATACCAAACCTCATGGCCAAT...GACACCTATGACCGGGTGCTGGTGGATGTGCCCTGTACCACAGACCGCCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CCA 90 bp AGACAACATGGCCTCCTGGTTTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTGCATGTGAGCCTGCTCACTaGCTTCTCCTTCTAAGCCCC +
Preference number: 2 (lower is better)
Translates to: RQHGLLVWWQGVQPQEAACEPAH*LLLLSP
Trigger: GGGGCTTAGAAGGAGAAGCCAGTGAGCAGGCTCACA...TGCAGCTTCTTGCGGCTGGACTCCTTGCCACCAAACCAGGAGGCCATGTTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp CAGGCCGAGGGCCAGAACAGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCCTTGATTTCCATCCCTaGTCTCTTCAGGCACATAGC +
Preference number: 2 (lower is better)
Translates to: QAEGQNRQQGGSIHQVVLLDFHP*SLQAHS
Trigger: GCTATGTGCCTGAAGAGATCAGGGATGGAAATCAAG...GAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCTGTTCTGGCCCTCGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp GGAGTGGCGGTCTGTGGTACAGGGCACATCCACCAGCACCCGGTCATAGGTGTCCCCAACCTGACAGGATaGGAAGAAACAAAATGTGTC +
Preference number: 2 (lower is better)
Translates to: GVAVCGTGHIHQHPVIGVPNLTG*EETKCV
Trigger: GACACATTTTGTTTCTTCTCATCCTGTCAGGTTGGG...GACACCTATGACCGGGTGCTGGTGGATGTGCCCTGTACCACAGACCGCCACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp GGCCGAGGGCCAGAACAGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCCAGTAGGGGTTAATGAGTaGGTTGGAAACCTGCTGATG +
Preference number: 2 (lower is better)
Translates to: GRGPEQAARRQHPSGSTPVGVNE*VGNLLM
Trigger: CATCAGCAGGTTTCCAACTCACTCATTAACCCCTAC...TGGAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCTGTTCTGGCCCTCGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp CCCAGGCTGCCAGGTCTGGCAGGAGGGAAGCGACTGATATCCCCTCTGTCAAAAACCATACTTCTGCTCTaGGAGGAGACTGACACGGAT +
Preference number: 2 (lower is better)
Translates to: PRLPGLAGGKRLISPLSKTILLL*EETDTD
Trigger: ATCCGTGTCAGTCTCCTCTCAGAGCAGAAGTATGGT...TTTTGACAGAGGGGATATCAGTCGCTTCCCTCCTGCCAGACCTGGCAGCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
3UTR-3UTR CCA 90 bp GGCAGCATCCATCAGGTAGTACTCCATGACACCCAGGCTGCCAGGTATGATCCCTGGCCAGGAGCTCAATaGCACCTTGCACCACATACT +
Preference number: 2 (lower is better)
Translates to: GSIHQVVLHDTQAARYDPWPGAQ*HLAPHT
Trigger: AGTATGTGGTGCAAGGTGCCATTGAGCTCCTGGCCA...GGGATCATACCTGGCAGCCTGGGTGTCATGGAGTACTACCTGATGGATGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495427.1
3UTR-3UTR CCA 90 bp ACACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTAAGACACGAACAGGATaGAGACAGGACCGAGAGTGC +
Preference number: 2 (lower is better)
Translates to: TRTGWRQDRECISATGPSKTRTG*RQDREC
Trigger: GCACTCTCGGTCCTGTCTCCATCCTGTTCGTGTCTT...ACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307089.7
ENST00000474844.5
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
3UTR-3UTR TCA 90 bp AATAGACAACATGGCCTCCTGGTTTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTTTGTTCTCCTCCTCATaGAGGGAGTGGCGGTCTGTG +
Preference number: 2 (lower is better)
Translates to: NRQHGLLVWWQGVQPQEALFSSS*REWRSV
Trigger: CACAGACCGCCACTCCCTTCATGAGGAGGAGAACAA...AGCTTCTTGCGGCTGGACTCCTTGCCACCAAACCAGGAGGCCATGTTGTCTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp GCAAGGAGTCCAGCCGCAAGAAGCTGCACTTGCAGCACAGGCAATATCTGTCGCACCTGGATGCTGTATTaGTTGGCCAGGAGCTCAATG +
Preference number: 2 (lower is better)
Translates to: ARSPAARSCTCSTGNICRTWMLY*LARSSM
Trigger: CATTGAGCTCCTGGCCAATCAATACAGCATCCAGGT...GCGACAGATATTGCCTGTGCTGCAAGTGCAGCTTCTTGCGGCTGGACTCCTTGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp ATCCCCTCTGTCAAAAGTGAAGCATCGAAGGTTCGGACTGCAGGCCCAGGAGGCACCATACTTCTGCTCTaGGAGGAGACTGACACGGAT +
Preference number: 2 (lower is better)
Translates to: IPSVKSEASKVRTAGPGGTILLL*EETDTD
Trigger: ATCCGTGTCAGTCTCCTCTCAGAGCAGAAGTATGGT...GCCTCCTGGGCCTGCAGTCCGAACCTTCGATGCTTCACTTTTGACAGAGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
3UTR-3UTR TCA 90 bp GGCCGAGGGCCAGAACAGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCCAAGCTTAGCACTTACATaGTCCCAGGCAGCAAAGTTA +
Preference number: 2 (lower is better)
Translates to: GRGPEQAARRQHPSGSTPSLALT*SQAAKL
Trigger: TAACTTTGCTGCCTGGGATCATGTAAGTGCTAAGCT...TGGAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCTGTTCTGGCCCTCGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
3UTR-3UTR GCA 90 bp AGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCCATGACACCCAGGCTGCCGCAAGAAGCTGCACTTaGAGCACAGGCAATATCTGT +
Preference number: 2 (lower is better)
Translates to: RQQGGSIHQVVLHDTQAAARSCT*STGNIC
Trigger: ACAGATATTGCCTGTGCTGCAAGTGCAGCTTCTTGC...GGCAGCCTGGGTGTCATGGAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR GCA 90 bp AGACAACATGGCCTCCTGGTTTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTGCACATTGGCAGCAAGATTaGGGCAACAGCCAGTCTGAA +
Preference number: 2 (lower is better)
Translates to: RQHGLLVWWQGVQPQEAAHWQQD*GNSQSE
Trigger: TTCAGACTGGCTGTTGCCGCAATCTTGCTGCCAATG...TGCAGCTTCTTGCGGCTGGACTCCTTGCCACCAAACCAGGAGGCCATGTTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CCA 90 bp GTCAAAAGTGAAGCATCGAAGGTTCGGACTGCAGGCCCAGGAGGCAGGGGATGGCATTCACAAAATCCTTaGCACTCAGCTGCTCCAGCT +
Preference number: 2 (lower is better)
Translates to: VKSEASKVRTAGPGGRGWHSQNP*HSAAPA
Trigger: AGCTGGAGCAGCTGAGTGCCAAGGATTTTGTGAATG...CCATCCCCTGCCTCCTGGGCCTGCAGTCCGAACCTTCGATGCTTCACTTTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
3UTR-3UTR CCA 90 bp TATTCGGGACGGGGAGAGATCATTGGCAGCAAGATTGCGGCAACAGCCAGTCTGACGGGGAGAGATCATTaGCAGCAAGATTGCGGCAAC +
Preference number: 2 (lower is better)
Translates to: YSGRGEIIGSKIAATASLTGRDH*QQDCGN
Trigger: GTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGT...CAGACTGGCTGTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTCCCGAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CCA 90 bp CTTCCACCTGTACCTGGATGCTGTATTGATTGGCCAGGAGCTCAATGGCACCTTTGCACAAGTCGGTCCTaGTTGCTGCAGCTGGGATGC +
Preference number: 2 (lower is better)
Translates to: LPPVPGCCIDWPGAQWHLCTSRS*LLQLGC
Trigger: GCATCCCAGCTGCAGCAACCAGGACCGACTTGTGCA...AAGGTGCCATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTACAGGTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CCA 90 bp GAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATTGGCAGCAATGCACAAGTCGGTCCTaGTTGCTGCAGCTGGGATGC +
Preference number: 2 (lower is better)
Translates to: EGSSVVWLFGTGRDHWQQCTSRS*LLQLGC
Trigger: GCATCCCAGCTGCAGCAACCAGGACCGACTTGTGCA...TTGCTGCCAATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp ACACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTGTAGGGGTTAATGAGTaGGTTGGAAACCTGCTGATG +
Preference number: 2 (lower is better)
Translates to: TRTGWRQDRECISATGPSVGVNE*VGNLLM
Trigger: CATCAGCAGGTTTCCAACTCACTCATTAACCCCTAC...ACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307089.7
ENST00000474844.5
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
3UTR-3UTR TCA 90 bp ATCCCCTCTGTCAAAAGTGAAGCATCGAAGGTTCGGACTGCAGGCCCAGGAGGCGAGACTGACACGGATTaGTGGCCAAAGATCTCCAAA +
Preference number: 2 (lower is better)
Translates to: IPSVKSEASKVRTAGPGGETDTD*WPKISK
Trigger: TTTGGAGATCTTTGGCCATCAATCCGTGTCAGTCTC...GCCTCCTGGGCCTGCAGTCCGAACCTTCGATGCTTCACTTTTGACAGAGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
3UTR-3UTR TCA 90 bp CGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGCTCTGAGAGGAGACTaGCACGGATTGATGGCCAAA +
Preference number: 2 (lower is better)
Translates to: RECISATGPSFQFLVHPTALRGD*HGLMAK
Trigger: TTTGGCCATCAATCCGTGTCAGTCTCCTCTCAGAGC...TGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp GGTCATGCTGGGAGAGTTCCCAGACCCCAGAAAGGTTGGATAAGGAGGGCCCACAGGCAGCAAAGTTATTaGCCAGTGCACCATACTTCT +
Preference number: 2 (lower is better)
Translates to: GHAGRVPRPQKGWIRRAHRQQSY*PVHHTS
Trigger: AGAAGTATGGTGCACTGGTCAATAACTTTGCTGCCT...GTGGGCCCTCCTTATCCAACCTTTCTGGGGTCTGGGAACTCTCCCAGCATGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp ATCAGAGGTTTGAGGGTCATGCTGGGAGAGTTCCCAGACCCCAGAAAGGTTGGAGGGCCCACAGAATCTTaGGGTGTGAACCAAAACAGG +
Preference number: 2 (lower is better)
Translates to: IRGLRVMLGEFPDPRKVGGPTES*GVNQNR
Trigger: CCTGTTTTGGTTCACACCTCAAGATTCTGTGGGCCC...TCCAACCTTTCTGGGGTCTGGGAACTCTCCCAGCATGACCCTCAAACCTCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR GCA 90 bp TCGGGACGGGGAGAGATCATTGGCAGCAAGATTGCGGCAACAGCCAGTCTGAAGGCAAGAAGCTGCACTTaGAGCACAGGCAATATCTGT +
Preference number: 2 (lower is better)
Translates to: SGRGEIIGSKIAATASLKARSCT*STGNIC
Trigger: ACAGATATTGCCTGTGCTGCAAGTGCAGCTTCTTGC...CTTCAGACTGGCTGTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR GCA 90 bp CTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTCCAGCCGCAAGAAGCTaGACTTGCAGCACAGGCAAT +
Preference number: 2 (lower is better)
Translates to: LCHWSQFPVSGASNRVYPPAARS*TCSTGN
Trigger: ATTGCCTGTGCTGCAAGTGCAGCTTCTTGCGGCTGG...AGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR GCA 90 bp TTTGCAGAAGTACATGGGGCCAAAATTGGCCATGAGGTTTGGTATTACCAGCTCATCGAAGGTTCGGACTaGAGGCCCAGGAGGCAGGGG +
Preference number: 2 (lower is better)
Translates to: FAEVHGAKIGHEVWYYQLIEGSD*RPRRQG
Trigger: CCCCTGCCTCCTGGGCCTGCAGTCCGAACCTTCGAT...GAGCTGGTAATACCAAACCTCATGGCCAATTTTGGCCCCATGTACTTCTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498008.5
3UTR-3UTR GCA 90 bp TATTCGGGACGGGGAGAGATCATTGGCAGCAAGATTGCGGCAACAGCCAGTCTGCATTGGCAGCAAGATTaGGGCAACAGCCAGTCTGAA +
Preference number: 2 (lower is better)
Translates to: YSGRGEIIGSKIAATASLHWQQD*GNSQSE
Trigger: TTCAGACTGGCTGTTGCCGCAATCTTGCTGCCAATG...CAGACTGGCTGTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTCCCGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR GCA 90 bp AGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGACCTCGCTGGGACTCTTaGTCTGGCTCCTGCTATGTT +
Preference number: 2 (lower is better)
Translates to: RVHLCHWSQFPVSGASNRPRWDS*SGSCYV
Trigger: AACATAGCAGGAGCCAGAGCAAGAGTCCCAGCGAGG...TCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR GCA 90 bp ACACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTATGGTGAGGACTCTTaGTCTGTGACTTTTGCCTCG +
Preference number: 2 (lower is better)
Translates to: TRTGWRQDRECISATGPSYGEDS*SVTFAS
Trigger: CGAGGCAAAAGTCACAGAGCAAGAGTCCTCACCATA...ACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR GCA 90 bp ACACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTGCAGCTGGGATGCTTaGTATAGCTGGCAATCTTGT +
Preference number: 2 (lower is better)
Translates to: TRTGWRQDRECISATGPSCSWDA*YSWQSC
Trigger: ACAAGATTGCCAGCTATAGCAAGCATCCCAGCTGCA...ACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR GCA 90 bp TGTGAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATTGGCAGGTCGGTCCTGGTTGCTaGAGCTGGGATGCTTGCTAT +
Preference number: 2 (lower is better)
Translates to: CEGSSVVWLFGTGRDHWQVGPGC*SWDACY
Trigger: ATAGCAAGCATCCCAGCTGCAGCAACCAGGACCGAC...CTGCCAATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp GGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTAAAACCCTTCGGAAGTaGGTCAGATCTTCCACCTGT +
Preference number: 2 (lower is better)
Translates to: GWRQDRECISATGPSFQFKTLRK*VRSSTC
Trigger: ACAGGTGGAAGATCTGACTCACTTCCGAAGGGTTTT...AAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp TCTCCTTCTAAGCCCCTAAGCGGGCAGCAAACTTTAGTACAGGCCTGGAGATGGACCAGCTCCCCAACCTaGCAGGATGAGAAGAAACAA +
Preference number: 2 (lower is better)
Translates to: SPSKPLSGQQTLVQAWRWTSSPT*QDEKKQ
Trigger: TTGTTTCTTCTCATCCTGTCAGGTTGGGGAGCTGGT...CCATCTCCAGGCCTGTACTAAAGTTTGCTGCCCGCTTAGGGGCTTAGAAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp GATCTTCCACCTGTACCTGGATGCTGTATTGATTGGCCAGGAGCTCAATGGCACGCTTCAGGGATTGGGTaGTACTATGTCAGCCTACGC +
Preference number: 2 (lower is better)
Translates to: DLPPVPGCCIDWPGAQWHASGIG*YYVSLR
Trigger: GCGTAGGCTGACATAGTATCACCCAATCCCTGAAGC...GTGCCATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTACAGGTGGAAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp TCGGGACGGGGAGAGATCATTGGCAGCAAGATTGCGGCAACAGCCAGTCTGAAGAGGCAGCAAAGTTATTaGCCAGTGCACCATACTTCT +
Preference number: 2 (lower is better)
Translates to: SGRGEIIGSKIAATASLKRQQSY*PVHHTS
Trigger: AGAAGTATGGTGCACTGGTCAATAACTTTGCTGCCT...CTTCAGACTGGCTGTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTCCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp AGACAACATGGCCTCCTGGTTTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTGCAAGGCAGCAAAGTTATTaGCCAGTGCACCATACTTCT +
Preference number: 2 (lower is better)
Translates to: RQHGLLVWWQGVQPQEAARQQSY*PVHHTS
Trigger: AGAAGTATGGTGCACTGGTCAATAACTTTGCTGCCT...TGCAGCTTCTTGCGGCTGGACTCCTTGCCACCAAACCAGGAGGCCATGTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp ATCCCCTCTGTCAAAAGTGAAGCATCGAAGGTTCGGACTGCAGGCCCAGGAGGCAGCTTAGCACTTACATaGTCCCAGGCAGCAAAGTTA +
Preference number: 2 (lower is better)
Translates to: IPSVKSEASKVRTAGPGGSLALT*SQAAKL
Trigger: TAACTTTGCTGCCTGGGATCATGTAAGTGCTAAGCT...GCCTCCTGGGCCTGCAGTCCGAACCTTCGATGCTTCACTTTTGACAGAGGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
3UTR-3UTR TCA 90 bp GGAGGGAAGCGACTGATATCCCCTCTGTCAAAAGTGAAGCATCGAAGGTTCGGACCCCTCTGTCAAAAGTaGAGCATCGAAGGTTCGGAC +
Preference number: 2 (lower is better)
Translates to: GGKRLISPLSKVKHRRFGPLCQK*SIEGSD
Trigger: GTCCGAACCTTCGATGCTTCACTTTTGACAGAGGGG...TCCGAACCTTCGATGCTTCACTTTTGACAGAGGGGATATCAGTCGCTTCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
3UTR-3UTR TCA 90 bp GAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATTGGCAGCAAGGGCCCACAGAATCTTaGGGTGTGAACCAAAACAGG +
Preference number: 2 (lower is better)
Translates to: EGSSVVWLFGTGRDHWQQGPTES*GVNQNR
Trigger: CCTGTTTTGGTTCACACCTCAAGATTCTGTGGGCCC...TTGCTGCCAATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR GCA 90 bp GCCGCAAGAAGCTGCACTTGCAGCACAGGCAATATCTGTCGCTCCTTCTTCCTTCCACCTGTACCTGGATaGTGTATTGATTGGCCAGGA +
Preference number: 2 (lower is better)
Translates to: AARSCTCSTGNICRSFFLPPVPG*CIDWPG
Trigger: TCCTGGCCAATCAATACAGCATCCAGGTACAGGTGG...AAGGAAGAAGGAGCGACAGATATTGCCTGTGCTGCAAGTGCAGCTTCTTGCGGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR GCA 90 bp AACTTGATTTCCATCCCTGATCTCTTCAGGCACATAGCTGTGAAGGATCTTCTGGGCAGGGGATGGGGCTaGAGATTGGCCACCCTCAGA +
Preference number: 2 (lower is better)
Translates to: NLISIPDLFRHIAVKDLLGRGWG*RLATLR
Trigger: TCTGAGGGTGGCCAATCTGCAGCCCCATCCCCTGCC...CAGAAGATCCTTCACAGCTATGTGCCTGAAGAGATCAGGGATGGAAATCAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486270.5
ENST00000498008.5
3UTR-3UTR GCA 90 bp GCCGCAAGAAGCTGCACTTGCAGCACAGGCAATATCTGTCGCTCCTTCTTCCTTACTTCAGATGAGGAGTaGACAAGTCGGTCCTGGTTG +
Preference number: 2 (lower is better)
Translates to: AARSCTCSTGNICRSFFLTSDEE*TSRSWL
Trigger: CAACCAGGACCGACTTGTGCACTCCTCATCTGAAGT...AAGGAAGAAGGAGCGACAGATATTGCCTGTGCTGCAAGTGCAGCTTCTTGCGGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CCA 90 bp TCGGGACGGGGAGAGATCATTGGCAGCAAGATTGCGGCAACAGCCAGTCTGAAGGTTCCCAGTGGGAGATaGCTTCATTCACAAAATCCT +
Preference number: 2 (lower is better)
Translates to: SGRGEIIGSKIAATASLKVPSGR*LHSQNP
Trigger: AGGATTTTGTGAATGAAGCCATCTCCCACTGGGAAC...CTTCAGACTGGCTGTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTCCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
3UTR-3UTR CCA 90 bp AGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCCATGACACCCAGGCTGCCCCTAGATTTTTGGTCTaGTCAGAACTTTTGCTCTGG +
Preference number: 2 (lower is better)
Translates to: RQQGGSIHQVVLHDTQAAPRFLV*SELLLW
Trigger: CCAGAGCAAAAGTTCTGACCAGACCAAAAATCTAGG...GGCAGCCTGGGTGTCATGGAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CCA 90 bp CTTCCACCTGTACCTGGATGCTGTATTGATTGGCCAGGAGCTCAATGGCACCTTAGACCCCAGAAAGGTTaGATAAGGAGGGCCCACAGA +
Preference number: 2 (lower is better)
Translates to: LPPVPGCCIDWPGAQWHLRPQKG*IRRAHR
Trigger: TCTGTGGGCCCTCCTTATCCAACCTTTCTGGGGTCT...AAGGTGCCATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTACAGGTGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR CAA 90 bp CCTTCGGAAGTGAGTCAGATCTTCCACCTGTACCTGGATGCTGTATaGATTGGCCAGGAGCTCAATGGCACCTTGCACCACATACTCGTT +
Preference number: 2 (lower is better)
Translates to: PSEVSQIFHLYLDAV*IGQELNGTLHHILV
Trigger: AACGAGTATGTGGTGCAAGGTGCCATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTACAGGTGGAAGATCTGACTCACTTCCGAAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp AGGTCTGGCAGGAGGGAAGCGACTGATATCCCCTCTGTCAAAAGTGAAGCATCGCTTGATTTCCATCCCTaGTCTCTTCAGGCACATAGC +
Preference number: 2 (lower is better)
Translates to: RSGRREATDIPSVKSEASLDFHP*SLQAHS
Trigger: GCTATGTGCCTGAAGAGATCAGGGATGGAAATCAAG...CGATGCTTCACTTTTGACAGAGGGGATATCAGTCGCTTCCCTCCTGCCAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486270.5
ENST00000498008.5
3UTR-3UTR TCA 90 bp TGTTGTTCTCCTCCTCATGAAGGGAGTGGCGGTCTGTGGTACAGGGCACATCCATTTCCTGCCATCCCATaGGGTAACTCGAACTTGATT +
Preference number: 2 (lower is better)
Translates to: CCSPPHEGSGGLWYRAHPFPAIP*GNSNLI
Trigger: AATCAAGTTCGAGTTACCTCATGGGATGGCAGGAAA...TGGATGTGCCCTGTACCACAGACCGCCACTCCCTTCATGAGGAGGAGAACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp GCAGAAGTACATGGGGCCAAAATTGGCCATGAGGTTTGGTATTACCAGCTCCCCACCTGGATGCTGTATTaGTTGGCCAGGAGCTCAATG +
Preference number: 2 (lower is better)
Translates to: AEVHGAKIGHEVWYYQLPTWMLY*LARSSM
Trigger: CATTGAGCTCCTGGCCAATCAATACAGCATCCAGGT...GGGGAGCTGGTAATACCAAACCTCATGGCCAATTTTGGCCCCATGTACTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp GATTGGCCAGGAGCTCAATGGCACCTTGCACCACATACTCGTTCTGTAAGTGTGACCTGGATGCTGTATTaGTTGGCCAGGAGCTCAATG +
Preference number: 2 (lower is better)
Translates to: DWPGAQWHLAPHTRSVSVTWMLY*LARSSM
Trigger: CATTGAGCTCCTGGCCAATCAATACAGCATCCAGGT...CACACTTACAGAACGAGTATGTGGTGCAAGGTGCCATTGAGCTCCTGGCCAATC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp TGTTGTTCTCCTCCTCATGAAGGGAGTGGCGGTCTGTGGTACAGGGCACATCCACCCAACCTGACAGGATaGGAAGAAACAAAATGTGTC +
Preference number: 2 (lower is better)
Translates to: CCSPPHEGSGGLWYRAHPPNLTG*EETKCV
Trigger: GACACATTTTGTTTCTTCTCATCCTGTCAGGTTGGG...TGGATGTGCCCTGTACCACAGACCGCCACTCCCTTCATGAGGAGGAGAACAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp TCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCACCAGCTCCCCAACCTaGCAGGATGAGAAGAAACAA +
Preference number: 2 (lower is better)
Translates to: SLPLVPVSSFWCIQQSIPTSSPT*QDEKKQ
Trigger: TTGTTTCTTCTCATCCTGTCAGGTTGGGGAGCTGGT...GGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR GCA 90 bp TCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTCCCACAATCCCAACTaGTACATCTCCAAGAGCTCC +
Preference number: 2 (lower is better)
Translates to: SLPLVPVSSFWCIQQSIPSHNPN*YISKSS
Trigger: GGAGCTCTTGGAGATGTAGCAGTTGGGATTGTGGGA...GGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR-3UTR GCA 90 bp GGAGGGAAGCGACTGATATCCCCTCTGTCAAAAGTGAAGCATCGAAGGTTCGGACATTGGCAGCAAGATTaGGGCAACAGCCAGTCTGAA +
Preference number: 2 (lower is better)
Translates to: GGKRLISPLSKVKHRRFGHWQQD*GNSQSE
Trigger: TTCAGACTGGCTGTTGCCGCAATCTTGCTGCCAATG...TCCGAACCTTCGATGCTTCACTTTTGACAGAGGGGATATCAGTCGCTTCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
3UTR-3UTR CCA 90 bp CCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTATGTGAGCCTGCTCACTaGCTTCTCCTTCTAAGCCCC +
Preference number: 2 (lower is better)
Translates to: PLVPVSSFWCIQQSIPFVCEPAH*LLLLSP
Trigger: GGGGCTTAGAAGGAGAAGCCAGTGAGCAGGCTCACA...TACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307089.7
ENST00000474844.5
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
3UTR-3UTR CCA 90 bp CCAGGTCTGGCAGGAGGGAAGCGACTGATATCCCCTCTGTCAAAAGTGAAGCATCATTCACAAAATCCTTaGCACTCAGCTGCTCCAGCT +
Preference number: 2 (lower is better)
Translates to: PGLAGGKRLISPLSKVKHHSQNP*HSAAPA
Trigger: AGCTGGAGCAGCTGAGTGCCAAGGATTTTGTGAATG...ATGCTTCACTTTTGACAGAGGGGATATCAGTCGCTTCCCTCCTGCCAGACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
3UTR-3UTR CCA 90 bp CAGTCGAACAGCAGGGAATTTGGGCTCTGTGGCAGCCTAGCGTCACACAGTGACTCTGGCCTAGATTTTTaGTCTGGTCAGAACTTTTGC +
Preference number: 2 (lower is better)
Translates to: QSNSREFGLCGSLASHSDSGLDF*SGQNFC
Trigger: GCAAAAGTTCTGACCAGACCAAAAATCTAGGCCAGA...GTCACTGTGTGACGCTAGGCTGCCACAGAGCCCAAATTCCCTGCTGTTCGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CCA 90 bp TGCAGCACAGGCAATATCTGTCGCTCCTTCTTCCTTGACCGCTTAAAGATGTTGGGAATTTGGGCTCTGTaGCAGCCTAGCGTCACACAG +
Preference number: 2 (lower is better)
Translates to: CSTGNICRSFFLDRLKMLGIWAL*QPSVTQ
Trigger: CTGTGTGACGCTAGGCTGCCACAGAGCCCAAATTCC...CAACATCTTTAAGCGGTCAAGGAAGAAGGAGCGACAGATATTGCCTGTGCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp CGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACACCCAACCTGACAGGATaGGAAGAAACAAAATGTGTC +
Preference number: 2 (lower is better)
Translates to: RECISATGPSFQFLVHPTPNLTG*EETKCV
Trigger: GACACATTTTGTTTCTTCTCATCCTGTCAGGTTGGG...TGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp CCCTCCTCAACTGACACCTCTAATACCCAAATAAGGATGAGCAGGAAAGACAGAGCATTTGCACTGACATaGAGTCCCCAACTGCAGCCC +
Preference number: 2 (lower is better)
Translates to: PSSTDTSNTQIRMSRKDRAFALT*SPQLQP
Trigger: GGGCTGCAGTTGGGGACTTCATGTCAGTGCAAATGC...TCTGTCTTTCCTGCTCATCCTTATTTGGGTATTAGAGGTGTCAGTTGAGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR-3UTR TCA 90 bp ATCATGATCTATGTGAGGCATCCATCCTGGTTTTGGAAGAGCTCAAATCAGAAGTGGCCAGGCTGGTCTTaGACTCCTCCTGACCTCAGG +
Preference number: 2 (lower is better)
Translates to: IMIYVRHPSWFWKSSNQKWPGWS*TPPDLR
Trigger: CCTGAGGTCAGGAGGAGTTCAAGACCAGCCTGGCCA...CTTCTGATTTGAGCTCTTCCAAAACCAGGATGGATGCCTCACATAGATCATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR-3UTR TCA 90 bp CATAGCTGTGAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATACCATACTTCTGCTCTaGGAGGAGACTGACACGGAT +
Preference number: 2 (lower is better)
Translates to: HSCEGSSVVWLFGTGRDHTILLL*EETDTD
Trigger: ATCCGTGTCAGTCTCCTCTCAGAGCAGAAGTATGGT...ATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTCACAGCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp TGCAGCACAGGCAATATCTGTCGCTCCTTCTTCCTTGACCGCTTAAAGATGTTGCCCCTCTGTCAAAAGTaGAGCATCGAAGGTTCGGAC +
Preference number: 2 (lower is better)
Translates to: CSTGNICRSFFLDRLKMLPLCQK*SIEGSD
Trigger: GTCCGAACCTTCGATGCTTCACTTTTGACAGAGGGG...CAACATCTTTAAGCGGTCAAGGAAGAAGGAGCGACAGATATTGCCTGTGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486270.5
ENST00000498008.5
3UTR-3UTR GCA 90 bp GTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTAGCAAGAAGCTGCACTTaGAGCACAGGCAATATCTGT +
Preference number: 2 (lower is better)
Translates to: VHLCHWSQFPVSGASNRVARSCT*STGNIC
Trigger: ACAGATATTGCCTGTGCTGCAAGTGCAGCTTCTTGC...TACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR GCA 90 bp CGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGTTTCCAGTTTCTGGTaGATCCAACAGAGTATACCC +
Preference number: 2 (lower is better)
Translates to: RECISATGPSFQFLVHPTVSSFW*IQQSIP
Trigger: GGGTATACTCTGTTGGATGCACCAGAAACTGGAAAC...TGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307089.7
ENST00000474844.5
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
3UTR-3UTR GCA 90 bp AGGGATTGGGTGATACTATGTCAGCCTACGCATTTTGCAGAAGTACATGGGGCCTTGCTCTGTGACTTTTaGCTCGCTGGGACTCTTGCT +
Preference number: 2 (lower is better)
Translates to: RDWVILCQPTHFAEVHGALLCDF*LAGTLA
Trigger: AGCAAGAGTCCCAGCGAGGCAAAAGTCACAGAGCAA...GGCCCCATGTACTTCTGCAAAATGCGTAGGCTGACATAGTATCACCCAATCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR GCA 90 bp TGTGAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATTGGCAGTATGGTGAGGACTCTTaGTCTGTGACTTTTGCCTCG +
Preference number: 2 (lower is better)
Translates to: CEGSSVVWLFGTGRDHWQYGEDS*SVTFAS
Trigger: CGAGGCAAAAGTCACAGAGCAAGAGTCCTCACCATA...CTGCCAATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR GCA 90 bp TCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTGCAGCTGGGATGCTTaGTATAGCTGGCAATCTTGT +
Preference number: 2 (lower is better)
Translates to: SLPLVPVSSFWCIQQSIPCSWDA*YSWQSC
Trigger: ACAAGATTGCCAGCTATAGCAAGCATCCCAGCTGCA...GGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CCA 90 bp GGCTTCATTCACAAAATCCTTGGCACTCAGCTGCTCCAGCTTAGCACTTACATGGGATCTTCTGTAGTCTaGCTATTCGGGACGGGGAGA +
Preference number: 2 (lower is better)
Translates to: GFIHKILGTQLLQLSTYMGSSVV*LFGTGR
Trigger: TCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCC...CATGTAAGTGCTAAGCTGGAGCAGCTGAGTGCCAAGGATTTTGTGAATGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
3UTR-3UTR CCA 90 bp CCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTATGGCCAGGAGCTCAATaGCACCTTGCACCACATACT +
Preference number: 2 (lower is better)
Translates to: PLVPVSSFWCIQQSIPFVWPGAQ*HLAPHT
Trigger: AGTATGTGGTGCAAGGTGCCATTGAGCTCCTGGCCA...TACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CCA 90 bp CGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACACTCCTAAGCCACATTTaGGCAGCAGTATTGTTGACA +
Preference number: 2 (lower is better)
Translates to: RECISATGPSFQFLVHPTLLSHI*AAVLLT
Trigger: TGTCAACAATACTGCTGCCCAAATGTGGCTTAGGAG...TGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR-3UTR CCA 90 bp GTCCTTATGCACATGTGGACTGCACTGCAAAGTGCCTTTGGATTGAATCATCATTGCTGTCGCCCACGCTaGAGTGCAATGGCGCTATCT +
Preference number: 2 (lower is better)
Translates to: VLMHMWTALQSAFGLNHHCCRPR*SAMALS
Trigger: AGATAGCGCCATTGCACTCCAGCGTGGGCGACAGCA...ATGATGATTCAATCCAAAGGCACTTTGCAGTGCAGTCCACATGTGCATAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR-3UTR CCA 90 bp AGGTCTGGCAGGAGGGAAGCGACTGATATCCCCTCTGTCAAAAGTGAAGCATCGGTTCCCAGTGGGAGATaGCTTCATTCACAAAATCCT +
Preference number: 2 (lower is better)
Translates to: RSGRREATDIPSVKSEASVPSGR*LHSQNP
Trigger: AGGATTTTGTGAATGAAGCCATCTCCCACTGGGAAC...CGATGCTTCACTTTTGACAGAGGGGATATCAGTCGCTTCCCTCCTGCCAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
3UTR-3UTR CCA 90 bp TATTCGGGACGGGGAGAGATCATTGGCAGCAAGATTGCGGCAACAGCCAGTCTGCCTAGATTTTTGGTCTaGTCAGAACTTTTGCTCTGG +
Preference number: 2 (lower is better)
Translates to: YSGRGEIIGSKIAATASLPRFLV*SELLLW
Trigger: CCAGAGCAAAAGTTCTGACCAGACCAAAAATCTAGG...CAGACTGGCTGTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTCCCGAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CCA 90 bp CTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGGGAATTTGGGCTCTGTaGCAGCCTAGCGTCACACAG +
Preference number: 2 (lower is better)
Translates to: LMLHNWTAGQQIFYFLLPGIWAL*QPSVTQ
Trigger: CTGTGTGACGCTAGGCTGCCACAGAGCCCAAATTCC...CGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp TCAGATCTTCCACCTGTACCTGGATGCTGTATTGATTGGCCAGGAGCTCAATGGCTTGATTTCCATCCCTaGTCTCTTCAGGCACATAGC +
Preference number: 2 (lower is better)
Translates to: SDLPPVPGCCIDWPGAQWLDFHP*SLQAHS
Trigger: GCTATGTGCCTGAAGAGATCAGGGATGGAAATCAAG...CCATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTACAGGTGGAAGATCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp AACTTGATTTCCATCCCTGATCTCTTCAGGCACATAGCTGTGAAGGATCTTCTGTTGTTCTCCTCCTCATaGAGGGAGTGGCGGTCTGTG +
Preference number: 2 (lower is better)
Translates to: NLISIPDLFRHIAVKDLLLFSSS*REWRSV
Trigger: CACAGACCGCCACTCCCTTCATGAGGAGGAGAACAA...CAGAAGATCCTTCACAGCTATGTGCCTGAAGAGATCAGGGATGGAAATCAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp TGTGAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATTGGCAGTCGCTCCTTCTTCCTTaGCCGCTTAAAGATGTTGTT +
Preference number: 2 (lower is better)
Translates to: CEGSSVVWLFGTGRDHWQSLLLP*PLKDVV
Trigger: AACAACATCTTTAAGCGGTCAAGGAAGAAGGAGCGA...CTGCCAATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp TTAATTGAGCCTGTTGGCTGCTCAAGACTGGTCAGGTGGAACTCACTTCAAGGGGTAGGGGTTAATGAGTaGGTTGGAAACCTGCTGATG +
Preference number: 2 (lower is better)
Translates to: LIEPVGCSRLVRWNSLQGVGVNE*VGNLLM
Trigger: CATCAGCAGGTTTCCAACTCACTCATTAACCCCTAC...CCCTTGAAGTGAGTTCCACCTGACCAGTCTTGAGCAGCCAACAGGCTCAATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR-3UTR TCA 90 bp TGGAAACCTGCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTAACTCACTTCAAGGGTaGCAGGGGCTCAGTAACTGG +
Preference number: 2 (lower is better)
Translates to: WKPADAPQLDSRTANLLLNSLQG*QGLSNW
Trigger: CCAGTTACTGAGCCCCTGTCACCCTTGAAGTGAGTT...AAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGCAGGTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR-3UTR TCA 90 bp TGTGAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATTGGCAGAGGCAGCAAAGTTATTaGCCAGTGCACCATACTTCT +
Preference number: 2 (lower is better)
Translates to: CEGSSVVWLFGTGRDHWQRQQSY*PVHHTS
Trigger: AGAAGTATGGTGCACTGGTCAATAACTTTGCTGCCT...CTGCCAATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp CTTCAGGGATTGGGTGATACTATGTCAGCCTACGCATTTTGCAGAAGTACATGGCGGCAACAGCCAGTCTaGAGCAACGCTAGTGTCTTT +
Preference number: 2 (lower is better)
Translates to: LQGLGDTMSAYAFCRSTWRQQPV*SNASVF
Trigger: AAAGACACTAGCGTTGCTTCAGACTGGCTGTTGCCG...CCATGTACTTCTGCAAAATGCGTAGGCTGACATAGTATCACCCAATCCCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp CTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTCATTTCTTGTTATGGTaGGGACTCTTGCTCTGTGAC +
Preference number: 2 (lower is better)
Translates to: LCHWSQFPVSGASNRVYPHFLLW*GLLLCD
Trigger: GTCACAGAGCAAGAGTCCTCACCATAACAAGAAATG...AGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR GCA 90 bp AGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTTTCCAGTTTCTGGTaGATCCAACAGAGTATACCC +
Preference number: 2 (lower is better)
Translates to: RVHLCHWSQFPVSGASNRVSSFW*IQQSIP
Trigger: GGGTATACTCTGTTGGATGCACCAGAAACTGGAAAC...TCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307089.7
ENST00000474844.5
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
3UTR-3UTR GCA 90 bp GATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGAACCGAGAGTGCATCTCTaGCACTGGTCCCAGTTTCCA +
Preference number: 2 (lower is better)
Translates to: DAPQLDSRTANLLLLIAEPRVHL*HWSQFP
Trigger: TGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGG...TTCGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307089.7
ENST00000474844.5
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
3UTR-3UTR GCA 90 bp CTTGTACACATCTCCTGGTGTACATGTATGAGTTTCTCTAGGATTTATCCCCAGCATGCAGGGACCATATaGCACGCACGGAGGCGGTTA +
Preference number: 2 (lower is better)
Translates to: LVHISWCTCMSFSRIYPQHAGTI*HARRRL
Trigger: TAACCGCCTCCGTGCGTGGCATATGGTCCCTGCATG...CTGGGGATAAATCCTAGAGAAACTCATACATGTACACCAGGAGATGTGTACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR-3UTR GCA 90 bp GATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGAACCTCGCTGGGACTCTTaGTCTGGCTCCTGCTATGTT +
Preference number: 2 (lower is better)
Translates to: DAPQLDSRTANLLLLIAEPRWDS*SGSCYV
Trigger: AACATAGCAGGAGCCAGAGCAAGAGTCCCAGCGAGG...TTCGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CCA 90 bp AGCACTTACATGATCCCAGGCAGCAAAGTTATTGACCAGTGCACCATACTTCTGGGATCTTCTGTAGTCTaGCTATTCGGGACGGGGAGA +
Preference number: 2 (lower is better)
Translates to: STYMIPGSKVIDQCTILLGSSVV*LFGTGR
Trigger: TCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCC...CAGAAGTATGGTGCACTGGTCAATAACTTTGCTGCCTGGGATCATGTAAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
3UTR-3UTR CCA 90 bp GTCCTTATGCACATGTGGACTGCACTGCAAAGTGCCTTTGGATTGAATCATCATCTGGCTGGAGTGCAGTaGCACAAAACGGAGTCTCAC +
Preference number: 2 (lower is better)
Translates to: VLMHMWTALQSAFGLNHHLAGVQ*HKTESH
Trigger: GTGAGACTCCGTTTTGTGCCACTGCACTCCAGCCAG...ATGATGATTCAATCCAAAGGCACTTTGCAGTGCAGTCCACATGTGCATAAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR-3UTR CCA 90 bp AGGGATTGGGTGATACTATGTCAGCCTACGCATTTTGCAGAAGTACATGGGGCCCATTCACAAAATCCTTaGCACTCAGCTGCTCCAGCT +
Preference number: 2 (lower is better)
Translates to: RDWVILCQPTHFAEVHGAHSQNP*HSAAPA
Trigger: AGCTGGAGCAGCTGAGTGCCAAGGATTTTGTGAATG...GGCCCCATGTACTTCTGCAAAATGCGTAGGCTGACATAGTATCACCCAATCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498008.5
3UTR-3UTR CCA 90 bp CTTCAGGGATTGGGTGATACTATGTCAGCCTACGCATTTTGCAGAAGTACATGGACGGGGAGAGATCATTaGCAGCAAGATTGCGGCAAC +
Preference number: 2 (lower is better)
Translates to: LQGLGDTMSAYAFCRSTWTGRDH*QQDCGN
Trigger: GTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGT...CCATGTACTTCTGCAAAATGCGTAGGCTGACATAGTATCACCCAATCCCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CCA 90 bp GATCTTCCACCTGTACCTGGATGCTGTATTGATTGGCCAGGAGCTCAATGGCACATCTATGCCTTGCTCTaGCCTAGATTTTTGGTCTGG +
Preference number: 2 (lower is better)
Translates to: DLPPVPGCCIDWPGAQWHIYALL*PRFLVW
Trigger: CCAGACCAAAAATCTAGGCCAGAGCAAGGCATAGAT...GTGCCATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTACAGGTGGAAGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp GGCTTCATTCACAAAATCCTTGGCACTCAGCTGCTCCAGCTTAGCACTTACATGCTTGATTTCCATCCCTaGTCTCTTCAGGCACATAGC +
Preference number: 2 (lower is better)
Translates to: GFIHKILGTQLLQLSTYMLDFHP*SLQAHS
Trigger: GCTATGTGCCTGAAGAGATCAGGGATGGAAATCAAG...CATGTAAGTGCTAAGCTGGAGCAGCTGAGTGCCAAGGATTTTGTGAATGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486270.5
ENST00000498008.5
3UTR-3UTR TCA 90 bp GATTGGCCAGGAGCTCAATGGCACCTTGCACCACATACTCGTTCTGTAAGTGTGAACAAAATGTGTCCATaGAAACCCTTCGGAAGTGAG +
Preference number: 2 (lower is better)
Translates to: DWPGAQWHLAPHTRSVSVNKMCP*KPFGSE
Trigger: CTCACTTCCGAAGGGTTTTCATGGACACATTTTGTT...CACACTTACAGAACGAGTATGTGGTGCAAGGTGCCATTGAGCTCCTGGCCAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp AACTTGATTTCCATCCCTGATCTCTTCAGGCACATAGCTGTGAAGGATCTTCTGCGGCAACAGCCAGTCTaGAGCAACGCTAGTGTCTTT +
Preference number: 2 (lower is better)
Translates to: NLISIPDLFRHIAVKDLLRQQPV*SNASVF
Trigger: AAAGACACTAGCGTTGCTTCAGACTGGCTGTTGCCG...CAGAAGATCCTTCACAGCTATGTGCCTGAAGAGATCAGGGATGGAAATCAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp ATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGAAACTCTTGCTCTGGCCTTaGCCTTTGCCATGTTGGGGA +
Preference number: 2 (lower is better)
Translates to: MLHNWTAGQQIFYFLLPKLLLWP*PLPCWG
Trigger: TCCCCAACATGGCAAAGGTCAAGGCCAGAGCAAGAG...TTTCGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp TCTTCTACTTCTTATTGCCGAAAACTGCAGAAAGACACGAACAGGATGGAGACACTCTTGCTCTGGCCTTaGCCTTTGCCATGTTGGGGA +
Preference number: 2 (lower is better)
Translates to: SSTSYCRKLQKDTNRMETLLLWP*PLPCWG
Trigger: TCCCCAACATGGCAAAGGTCAAGGCCAGAGCAAGAG...TGTCTCCATCCTGTTCGTGTCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp CATAGCTGTGAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATCAGAATCTTGAGGTGTaGACCAAAACAGGGACTTCT +
Preference number: 2 (lower is better)
Translates to: HSCEGSSVVWLFGTGRDHQNLEV*TKTGTS
Trigger: AGAAGTCCCTGTTTTGGTTCACACCTCAAGATTCTG...ATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTCACAGCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR GCA 90 bp GATCTTCCACCTGTACCTGGATGCTGTATTGATTGGCCAGGAGCTCAATGGCACCTTATTGCCGAAAACTaGAGAAAGACACGAACAGGA +
Preference number: 2 (lower is better)
Translates to: DLPPVPGCCIDWPGAQWHLIAEN*RKTRTG
Trigger: TCCTGTTCGTGTCTTTCTGCAGTTTTCGGCAATAAG...GTGCCATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTACAGGTGGAAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR GCA 90 bp TGGAAACCTGCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTACTTCAGATGAGGAGTaGACAAGTCGGTCCTGGTTG +
Preference number: 2 (lower is better)
Translates to: WKPADAPQLDSRTANLLLTSDEE*TSRSWL
Trigger: CAACCAGGACCGACTTGTGCACTCCTCATCTGAAGT...AAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGCAGGTTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CCA 90 bp GATTGGCCAGGAGCTCAATGGCACCTTGCACCACATACTCGTTCTGTAAGTGTGCCAGTTTCCAGTTTCTaGTGCATCCAACAGAGTATA +
Preference number: 2 (lower is better)
Translates to: DWPGAQWHLAPHTRSVSVPVSSF*CIQQSI
Trigger: TATACTCTGTTGGATGCACCAGAAACTGGAAACTGG...CACACTTACAGAACGAGTATGTGGTGCAAGGTGCCATTGAGCTCCTGGCCAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CCA 90 bp TGGAAACCTGCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTGTGCATCTCTGCCACTaGTCCCAGTTTCCAGTTTCT +
Preference number: 2 (lower is better)
Translates to: WKPADAPQLDSRTANLLLVHLCH*SQFPVS
Trigger: AGAAACTGGAAACTGGGACCAGTGGCAGAGATGCAC...AAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGCAGGTTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307089.7
ENST00000474844.5
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
3UTR-3UTR CCA 90 bp TCTTCTACTTCTTATTGCCGAAAACTGCAGAAAGACACGAACAGGATGGAGACACTGGGACTCTTGCTCTaGCTCCTGCTATGTTGGGGA +
Preference number: 2 (lower is better)
Translates to: SSTSYCRKLQKDTNRMETLGLLL*LLLCWG
Trigger: TCCCCAACATAGCAGGAGCCAGAGCAAGAGTCCCAG...TGTCTCCATCCTGTTCGTGTCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR CAA 90 bp TGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTaGTATTCTTGCTTCAGGGATTGGGTGATACTATGTCAGCCTACG +
Preference number: 2 (lower is better)
Translates to: WSQFPVSGASNRVYP*YSCFRDWVILCQPT
Trigger: CGTAGGCTGACATAGTATCACCCAATCCCTGAAGCAAGAATACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR CAA 90 bp ATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATaGCCGAAAACTGCAGAAAGACACGAACAGGATGGAGACAGGACC +
Preference number: 2 (lower is better)
Translates to: MLHNWTAGQQIFYFL*PKTAERHEQDGDRT
Trigger: GGTCCTGTCTCCATCCTGTTCGTGTCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307089.7
ENST00000474844.5
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
3UTR CAA 90 bp AAGAGTATGACGGTTTTGTGGCAGAAGCAGCCTCCTAAGCCACATTaGGGCAGCAGTATTGTTGACAGCAGGAATGGCCAGAATTATTCA +
Preference number: 2 (lower is better)
Translates to: KSMTVLWQKQPPKPH*GSSIVDSRNGQNYS
Trigger: TGAATAATTCTGGCCATTCCTGCTGTCAACAATACTGCTGCCCAAATGTGGCTTAGGAGGCTGCTTCTGCCACAAAACCGTCATACTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR CAA 90 bp ATCTATGCCTTGCTCTGGCCTAGATTTTTGGTCTGGTCAGAACTTTaGCTCTGGCCCTCATTTCTTGTTATGGTGAGGACTCTTGCTCTG +
Preference number: 2 (lower is better)
Translates to: IYALLWPRFLVWSEL*LWPSFLVMVRTLAL
Trigger: CAGAGCAAGAGTCCTCACCATAACAAGAAATGAGGGCCAGAGCAAAAGTTCTGACCAGACCAAAAATCTAGGCCAGAGCAAGGCATAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR CAA 90 bp GCTGGGATGCTTGCTATAGCTGGCAATCTTGTTACTATCTATGCCTaGCTCTGGCCTAGATTTTTGGTCTGGTCAGAACTTTTGCTCTGG +
Preference number: 2 (lower is better)
Translates to: AGMLAIAGNLVTIYA*LWPRFLVWSELLLW
Trigger: CCAGAGCAAAAGTTCTGACCAGACCAAAAATCTAGGCCAGAGCAAGGCATAGATAGTAACAAGATTGCCAGCTATAGCAAGCATCCCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp TGCAGCACAGGCAATATCTGTCGCTCCTTCTTCCTTGACCGCTTAAAGATGTTGGAGGTAACTCGAACTTaGTTTCCATCCCTGATCTCT +
Preference number: 2 (lower is better)
Translates to: CSTGNICRSFFLDRLKMLEVTRT*FPSLIS
Trigger: AGAGATCAGGGATGGAAATCAAGTTCGAGTTACCTC...CAACATCTTTAAGCGGTCAAGGAAGAAGGAGCGACAGATATTGCCTGTGCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp TGGAAACCTGCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTAAAACCCTTCGGAAGTaGGTCAGATCTTCCACCTGT +
Preference number: 2 (lower is better)
Translates to: WKPADAPQLDSRTANLLLKTLRK*VRSSTC
Trigger: ACAGGTGGAAGATCTGACTCACTTCCGAAGGGTTTT...AAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGCAGGTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp TCTTCTACTTCTTATTGCCGAAAACTGCAGAAAGACACGAACAGGATGGAGACAGCTCTGAGAGGAGACTaGCACGGATTGATGGCCAAA +
Preference number: 2 (lower is better)
Translates to: SSTSYCRKLQKDTNRMETALRGD*HGLMAK
Trigger: TTTGGCCATCAATCCGTGTCAGTCTCCTCTCAGAGC...TGTCTCCATCCTGTTCGTGTCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR GCA 90 bp CACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTATGCAAGAAGCTGCACTTaGAGCACAGGCAATATCTGT +
Preference number: 2 (lower is better)
Translates to: HWSQFPVSGASNRVYPLYARSCT*STGNIC
Trigger: ACAGATATTGCCTGTGCTGCAAGTGCAGCTTCTTGC...ATACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR GCA 90 bp TTTGCAGAAGTACATGGGGCCAAAATTGGCCATGAGGTTTGGTATTACCAGCTCAGCTCAATGGCACCTTaGACCACATACTCGTTCTGT +
Preference number: 2 (lower is better)
Translates to: FAEVHGAKIGHEVWYYQLSSMAP*TTYSFC
Trigger: ACAGAACGAGTATGTGGTGCAAGGTGCCATTGAGCT...GAGCTGGTAATACCAAACCTCATGGCCAATTTTGGCCCCATGTACTTCTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR GCA 90 bp AGCTGTGAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATTGGTTACTATCTATGCCTTaGTCTGGCCTAGATTTTTGG +
Preference number: 2 (lower is better)
Translates to: SCEGSSVVWLFGTGRDHWLLSMP*SGLDFW
Trigger: CCAAAAATCTAGGCCAGAGCAAGGCATAGATAGTAA...CCAATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTCACAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR GCA 90 bp AACAGAGTATACCCTTTGTATTCTTGCTTCAGGGATTGGGTGATACTATGTCAGGTCGGTCCTGGTTGCTaGAGCTGGGATGCTTGCTAT +
Preference number: 2 (lower is better)
Translates to: NRVYPLYSCFRDWVILCQVGPGC*SWDACY
Trigger: ATAGCAAGCATCCCAGCTGCAGCAACCAGGACCGAC...CTGACATAGTATCACCCAATCCCTGAAGCAAGAATACAAAGGGTATACTCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CCA 90 bp CTGCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGGGATGCTGTATTGATTaGCCAGGAGCTCAATGGCAC +
Preference number: 2 (lower is better)
Translates to: LLMLHNWTAGQQIFYFLLGCCID*PGAQWH
Trigger: GTGCCATTGAGCTCCTGGCCAATCAATACAGCATCC...CAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CCA 90 bp AGGGATTGGGTGATACTATGTCAGCCTACGCATTTTGCAGAAGTACATGGGGCCCCAGTTTCCAGTTTCTaGTGCATCCAACAGAGTATA +
Preference number: 2 (lower is better)
Translates to: RDWVILCQPTHFAEVHGAPVSSF*CIQQSI
Trigger: TATACTCTGTTGGATGCACCAGAAACTGGAAACTGG...GGCCCCATGTACTTCTGCAAAATGCGTAGGCTGACATAGTATCACCCAATCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp CTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGTCGCTCCTTCTTCCTTaGCCGCTTAAAGATGTTGTT +
Preference number: 2 (lower is better)
Translates to: LMLHNWTAGQQIFYFLLPSLLLP*PLKDVV
Trigger: AACAACATCTTTAAGCGGTCAAGGAAGAAGGAGCGA...CGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp CTGCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGAAAACCCTTCGGAAGTaGGTCAGATCTTCCACCTGT +
Preference number: 2 (lower is better)
Translates to: LLMLHNWTAGQQIFYFLLKTLRK*VRSSTC
Trigger: ACAGGTGGAAGATCTGACTCACTTCCGAAGGGTTTT...CAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp AACTTGATTTCCATCCCTGATCTCTTCAGGCACATAGCTGTGAAGGATCTTCTGGAGACTGACACGGATTaGTGGCCAAAGATCTCCAAA +
Preference number: 2 (lower is better)
Translates to: NLISIPDLFRHIAVKDLLETDTD*WPKISK
Trigger: TTTGGAGATCTTTGGCCATCAATCCGTGTCAGTCTC...CAGAAGATCCTTCACAGCTATGTGCCTGAAGAGATCAGGGATGGAAATCAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp CACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTATCAGAATCTTGAGGTGTaGACCAAAACAGGGACTTCT +
Preference number: 2 (lower is better)
Translates to: HWSQFPVSGASNRVYPLYQNLEV*TKTGTS
Trigger: AGAAGTCCCTGTTTTGGTTCACACCTCAAGATTCTG...ATACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR GCA 90 bp TTCCTAGCTTCACCTGATTTTGAGTCTCAGAGATCTTCCAGGGCCCTCAATTACGTTTCCAGTTTCTGGTaGATCCAACAGAGTATACCC +
Preference number: 2 (lower is better)
Translates to: FLASPDFESQRSSRALNYVSSFW*IQQSIP
Trigger: GGGTATACTCTGTTGGATGCACCAGAAACTGGAAAC...GTAATTGAGGGCCCTGGAAGATCTCTGAGACTCAAAATCAGGTGAAGCTAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR-3UTR CCA 90 bp ATATTCCAGTTTACTTGTCCACTCTCTTGCTCATGGGCATCTGGGTTATTTCTAGGATCTTCTGTAGTCTaGCTATTCGGGACGGGGAGA +
Preference number: 2 (lower is better)
Translates to: IFQFTCPLSCSWASGLFLGSSVV*LFGTGR
Trigger: TCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCC...TAGAAATAACCCAGATGCCCATGAGCAAGAGAGTGGACAAGTAAACTGGAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR-3UTR CCA 90 bp AGCAGTATTGTTGACAGCAGGAATGGCCAGAATTATTCAGCTCAGAGGGTTTTTGTGCATCTCTGCCACTaGTCCCAGTTTCCAGTTTCT +
Preference number: 2 (lower is better)
Translates to: SSIVDSRNGQNYSAQRVFVHLCH*SQFPVS
Trigger: AGAAACTGGAAACTGGGACCAGTGGCAGAGATGCAC...AAAAACCCTCTGAGCTGAATAATTCTGGCCATTCCTGCTGTCAACAATACTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR-3UTR CCA 90 bp CTTCAGGGATTGGGTGATACTATGTCAGCCTACGCATTTTGCAGAAGTACATGGATCTATGCCTTGCTCTaGCCTAGATTTTTGGTCTGG +
Preference number: 2 (lower is better)
Translates to: LQGLGDTMSAYAFCRSTWIYALL*PRFLVW
Trigger: CCAGACCAAAAATCTAGGCCAGAGCAAGGCATAGAT...CCATGTACTTCTGCAAAATGCGTAGGCTGACATAGTATCACCCAATCCCTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR CAA 90 bp TGGTGCATCCAACAGAGTATACCCTTTGTATTCTTGCTTCAGGGATaGGGTGATACTATGTCAGCCTACGCATTTTGCAGAAGTACATGG +
Preference number: 2 (lower is better)
Translates to: WCIQQSIPFVFLLQG*GDTMSAYAFCRSTW
Trigger: CCATGTACTTCTGCAAAATGCGTAGGCTGACATAGTATCACCCAATCCCTGAAGCAAGAATACAAAGGGTATACTCTGTTGGATGCACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR CAA 90 bp GTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTATTCTaGCTTCAGGGATTGGGTGATACTATGTCAGCCTACGCATTTTGC +
Preference number: 2 (lower is better)
Translates to: VSSFWCIQQSIPFVF*LQGLGDTMSAYAFC
Trigger: GCAAAATGCGTAGGCTGACATAGTATCACCCAATCCCTGAAGCAAGAATACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR CAA 90 bp ATGGTCCTTATGCACATGTGGACTGCACTGCAAAGTGCCTTTGGATaGAATCATCATGATCTATGTGAGGCATCCATCCTGGTTTTGGAA +
Preference number: 2 (lower is better)
Translates to: MVLMHMWTALQSAFG*NHHDLCEASILVLE
Trigger: TTCCAAAACCAGGATGGATGCCTCACATAGATCATGATGATTCAATCCAAAGGCACTTTGCAGTGCAGTCCACATGTGCATAAGGACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR-3UTR TCA 90 bp CTTCAGGGATTGGGTGATACTATGTCAGCCTACGCATTTTGCAGAAGTACATGGAACAAAATGTGTCCATaGAAACCCTTCGGAAGTGAG +
Preference number: 2 (lower is better)
Translates to: LQGLGDTMSAYAFCRSTWNKMCP*KPFGSE
Trigger: CTCACTTCCGAAGGGTTTTCATGGACACATTTTGTT...CCATGTACTTCTGCAAAATGCGTAGGCTGACATAGTATCACCCAATCCCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CCA 90 bp CTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGCCAGTTTCCAGTTTCTaGTGCATCCAACAGAGTATA +
Preference number: 2 (lower is better)
Translates to: LMLHNWTAGQQIFYFLLPPVSSF*CIQQSI
Trigger: TATACTCTGTTGGATGCACCAGAAACTGGAAACTGG...CGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307089.7
ENST00000474844.5
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
3UTR-3UTR CCA 90 bp AACAGAGTATACCCTTTGTATTCTTGCTTCAGGGATTGGGTGATACTATGTCAGGTGCATCTCTGCCACTaGTCCCAGTTTCCAGTTTCT +
Preference number: 2 (lower is better)
Translates to: NRVYPLYSCFRDWVILCQVHLCH*SQFPVS
Trigger: AGAAACTGGAAACTGGGACCAGTGGCAGAGATGCAC...CTGACATAGTATCACCCAATCCCTGAAGCAAGAATACAAAGGGTATACTCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR TCA 90 bp AAACATCAGGAAATTCCTAGGTGTTCAGAAAGCAAAAGGAGAGTTACCATTCTAGGGCAGCAGTATTGTTaGCAGCAGGAATGGCCAGAA +
Preference number: 2 (lower is better)
Translates to: KHQEIPRCSESKRRVTILGQQYC*QQEWPE
Trigger: TTCTGGCCATTCCTGCTGTCAACAATACTGCTGCCC...TAGAATGGTAACTCTCCTTTTGCTTTCTGAACACCTAGGAATTTCCTGATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR-3UTR GCA 90 bp CTTCAGGGATTGGGTGATACTATGTCAGCCTACGCATTTTGCAGAAGTACATGGTACCCTTTGTATTCTTaGTTCAGGGATTGGGTGATA +
Preference number: 2 (lower is better)
Translates to: LQGLGDTMSAYAFCRSTWYPLYS*FRDWVI
Trigger: TATCACCCAATCCCTGAAGCAAGAATACAAAGGGTA...CCATGTACTTCTGCAAAATGCGTAGGCTGACATAGTATCACCCAATCCCTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR GCA 90 bp GTATTCTTGCTTCAGGGATTGGGTGATACTATGTCAGCCTACGCATTTTGCAGACTTATTGCCGAAAACTaGAGAAAGACACGAACAGGA +
Preference number: 2 (lower is better)
Translates to: VFLLQGLGDTMSAYAFCRLIAEN*RKTRTG
Trigger: TCCTGTTCGTGTCTTTCTGCAGTTTTCGGCAATAAG...TCTGCAAAATGCGTAGGCTGACATAGTATCACCCAATCCCTGAAGCAAGAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CCA 90 bp AAATCTTCTACTTCTTATTGCCGAAAACTGCAGAAAGACACGAACAGGATGGAGATTGGCCATGAGGTTTaGTATTACCAGCTCCCCAAC +
Preference number: 2 (lower is better)
Translates to: KSSTSYCRKLQKDTNRMEIGHEV*YYQLPN
Trigger: GTTGGGGAGCTGGTAATACCAAACCTCATGGCCAAT...CTCCATCCTGTTCGTGTCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR CAA 90 bp TTTGGATTGAATCATCATGATCTATGTGAGGCATCCATCCTGGTTTaGGAAGAGCTCAAATCAGAAGTTCCCAGCAGGGCTTTTATGTTG +
Preference number: 2 (lower is better)
Translates to: FGLNHHDLCEASILV*EELKSEVPSRAFML
Trigger: CAACATAAAAGCCCTGCTGGGAACTTCTGATTTGAGCTCTTCCAAAACCAGGATGGATGCCTCACATAGATCATGATGATTCAATCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR-3UTR TCA 90 bp ATATTCCAGTTTACTTGTCCACTCTCTTGCTCATGGGCATCTGGGTTATTTCTATTTCCTGCCATCCCATaGGGTAACTCGAACTTGATT +
Preference number: 2 (lower is better)
Translates to: IFQFTCPLSCSWASGLFLFPAIP*GNSNLI
Trigger: AATCAAGTTCGAGTTACCTCATGGGATGGCAGGAAA...TAGAAATAACCCAGATGCCCATGAGCAAGAGAGTGGACAAGTAAACTGGAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR-3UTR TCA 90 bp AACAGAGTATACCCTTTGTATTCTTGCTTCAGGGATTGGGTGATACTATGTCAGTTTCCTGCCATCCCATaGGGTAACTCGAACTTGATT +
Preference number: 2 (lower is better)
Translates to: NRVYPLYSCFRDWVILCQFPAIP*GNSNLI
Trigger: AATCAAGTTCGAGTTACCTCATGGGATGGCAGGAAA...CTGACATAGTATCACCCAATCCCTGAAGCAAGAATACAAAGGGTATACTCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR GCA 90 bp GTCCTTATGCACATGTGGACTGCACTGCAAAGTGCCTTTGGATTGAATCATCATTACCCTTTGTATTCTTaGTTCAGGGATTGGGTGATA +
Preference number: 2 (lower is better)
Translates to: VLMHMWTALQSAFGLNHHYPLYS*FRDWVI
Trigger: TATCACCCAATCCCTGAAGCAAGAATACAAAGGGTA...ATGATGATTCAATCCAAAGGCACTTTGCAGTGCAGTCCACATGTGCATAAGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR-3UTR CCA 90 bp CTTGTACACATCTCCTGGTGTACATGTATGAGTTTCTCTAGGATTTATCCCCAGCCAGTTTCCAGTTTCTaGTGCATCCAACAGAGTATA +
Preference number: 2 (lower is better)
Translates to: LVHISWCTCMSFSRIYPQPVSSF*CIQQSI
Trigger: TATACTCTGTTGGATGCACCAGAAACTGGAAACTGG...CTGGGGATAAATCCTAGAGAAACTCATACATGTACACCAGGAGATGTGTACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR-3UTR CCA 90 bp AACAGAGTATACCCTTTGTATTCTTGCTTCAGGGATTGGGTGATACTATGTCAGGTCATACACGAGGTCTaGGAATACCTGCTAGATGAA +
Preference number: 2 (lower is better)
Translates to: NRVYPLYSCFRDWVILCQVIHEV*EYLLDE
Trigger: TTCATCTAGCAGGTATTCCCAGACCTCGTGTATGAC...CTGACATAGTATCACCCAATCCCTGAAGCAAGAATACAAAGGGTATACTCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR-3UTR TCA 90 bp GTGAATAGGGTTGCTATGAATATTCTTGTACACATCTCCTGGTGTACATGTATGTCGCTCCTTCTTCCTTaGCCGCTTAAAGATGTTGTT +
Preference number: 2 (lower is better)
Translates to: VNRVAMNILVHISWCTCMSLLLP*PLKDVV
Trigger: AACAACATCTTTAAGCGGTCAAGGAAGAAGGAGCGA...CATACATGTACACCAGGAGATGTGTACAAGAATATTCATAGCAACCCTATTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR-3UTR CCA 90 bp AACAGAGTATACCCTTTGTATTCTTGCTTCAGGGATTGGGTGATACTATGTCAGTCTGGCCTAGATTTTTaGTCTGGTCAGAACTTTTGC +
Preference number: 2 (lower is better)
Translates to: NRVYPLYSCFRDWVILCQSGLDF*SGQNFC
Trigger: GCAAAAGTTCTGACCAGACCAAAAATCTAGGCCAGA...CTGACATAGTATCACCCAATCCCTGAAGCAAGAATACAAAGGGTATACTCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR GCA 90 bp GTATTCTTGCTTCAGGGATTGGGTGATACTATGTCAGCCTACGCATTTTGCAGAACTTTATTGGCCAAATaGTTCTCCTATGTTTACAAC +
Preference number: 2 (lower is better)
Translates to: VFLLQGLGDTMSAYAFCRTLLAK*FSYVYN
Trigger: GTTGTAAACATAGGAGAAGCATTTGGCCAATAAAGT...TCTGCAAAATGCGTAGGCTGACATAGTATCACCCAATCCCTGAAGCAAGAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CCA 90 bp AGCAGTATTGTTGACAGCAGGAATGGCCAGAATTATTCAGCTCAGAGGGTTTTTTTTCAACAACTTTATTaGCCAAATGCTTCTCCTATG +
Preference number: 2 (lower is better)
Translates to: SSIVDSRNGQNYSAQRVFFQQLY*PNASPM
Trigger: CATAGGAGAAGCATTTGGCCAATAAAGTTGTTGAAA...AAAAACCCTCTGAGCTGAATAATTCTGGCCATTCCTGCTGTCAACAATACTGCT
39% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR CAA 90 bp TTTGACAATTGTATAATGTTCTATTATGTGAATATTCCAGTTTACTaGTCCACTCTCTTGCTCATGGGCATCTGGGTTATTTCTAGGCTT +
Preference number: 2 (lower is better)
Translates to: FDNCIMFYYVNIPVY*STLLLMGIWVISRL
Trigger: AAGCCTAGAAATAACCCAGATGCCCATGAGCAAGAGAGTGGACAAGTAAACTGGAATATTCACATAATAGAACATTATACAATTGTCAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR GCA 72 bp GGAGCTGCACATAGGTCAAGCACGATGTCCCCAGGCTaGAGGCCGAGGGCCAGAACAGGCAGCAAGGAGGCA +
Preference number: 3 (lower is better)
Translates to: GAAHRSSTMSPG*RPRARTGSKEA
Trigger: TGCCTCCTTGCTGCCTGTTCTGGCCCTCGGCCTGCAGCCTGGGGACATCGTGCTTGACCTATGTGCAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CAA 90 bp GGCCGAGGGCCAGAACAGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCCAACAAGTCGGTCCTGGTaGCTGCAGCTGGGATGCTTG +
Preference number: 3 (lower is better)
Translates to: GRGPEQAARRQHPSGSTPTSRSW*LQLGCL
Trigger: CAAGCATCCCAGCTGCAGCAACCAGGACCGACTTGT...TGGAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCTGTTCTGGCCCTCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CAA 90 bp GCAAGGAGTCCAGCCGCAAGAAGCTGCACTTGCAGCACAGGCAATATCTGTCGCACATGGCCTCCTGGTTaGGTGGCAAGGAGTCCAGCC +
Preference number: 3 (lower is better)
Translates to: ARSPAARSCTCSTGNICRTWPPG*VARSPA
Trigger: GGCTGGACTCCTTGCCACCAAACCAGGAGGCCATGT...GCGACAGATATTGCCTGTGCTGCAAGTGCAGCTTCTTGCGGCTGGACTCCTTGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR CCA 72 bp TGTTGTTCTCCTCCTCATGAAGGGAGTGGCGGTCTGTaGTACAGGGCACATCCACCAGCACCCGGTCATAGG +
Preference number: 3 (lower is better)
Translates to: CCSPPHEGSGGL*YRAHPPAPGHR
Trigger: CCTATGACCGGGTGCTGGTGGATGTGCCCTGTACCACAGACCGCCACTCCCTTCATGAGGAGGAGAACAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CAA 90 bp CAGCACCCGGTCATAGGTGTCCCCCTCCAGTTCTCCCCATTTCCTGCCATCCCAGCTGATGCTCCACAATaGGACAGCAGGACAGCAAAT +
Preference number: 3 (lower is better)
Translates to: QHPVIGVPLQFSPFPAIPADAPQ*DSRTAN
Trigger: ATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGC...TGGGATGGCAGGAAATGGGGAGAACTGGAGGGGGACACCTATGACCGGGTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CAA 90 bp GGCCGAGGGCCAGAACAGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCCATCATTCACAAAATCCTaGGCACTCAGCTGCTCCAGC +
Preference number: 3 (lower is better)
Translates to: GRGPEQAARRQHPSGSTPSFTKS*ALSCSS
Trigger: GCTGGAGCAGCTGAGTGCCAAGGATTTTGTGAATGA...TGGAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCTGTTCTGGCCCTCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
3UTR-3UTR CAA 90 bp GGCAGCATCCATCAGGTAGTACTCCATGACACCCAGGCTGCCAGGTATGATCCCGACGGGGAGAGATCATaGGCAGCAAGATTGCGGCAA +
Preference number: 3 (lower is better)
Translates to: GSIHQVVLHDTQAARYDPDGERS*AARLRQ
Trigger: TTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTC...GGGATCATACCTGGCAGCCTGGGTGTCATGGAGTACTACCTGATGGATGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495427.1
3UTR TCA 72 bp CTCCCAGGTTCAAGCAGTTCTCCCGCTCCAGCCTACTaGGTAGCTGAGATTACAGGCACCTGCCATCATGCC +
Preference number: 3 (lower is better)
Translates to: LPGSSSSPAPAY*VAEITGTCHHA
Trigger: GGCATGATGGCAGGTGCCTGTAATCTCAGCTACTCAGTAGGCTGGAGCGGGAGAACTGCTTGAACCTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR GCA 72 bp TGGAGTGCAGTGGCACAAAACGGAGTCTCACTCTCTTaGCCAGGCTGCTCACTGCAGCCTCAAACTCCTGTG +
Preference number: 3 (lower is better)
Translates to: WSAVAQNGVSLS*PGCSLQPQTPV
Trigger: CACAGGAGTTTGAGGCTGCAGTGAGCAGCCTGGGCAAGAGAGTGAGACTCCGTTTTGTGCCACTGCACTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR-3UTR CAA 90 bp AGACAACATGGCCTCCTGGTTTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTGCACGCAAGAAGCTGCACTaGCAGCACAGGCAATATCTG +
Preference number: 3 (lower is better)
Translates to: RQHGLLVWWQGVQPQEAARKKLH*QHRQYL
Trigger: CAGATATTGCCTGTGCTGCAAGTGCAGCTTCTTGCG...TGCAGCTTCTTGCGGCTGGACTCCTTGCCACCAAACCAGGAGGCCATGTTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CAA 90 bp CGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAACAAGTCGGTCCTGGTaGCTGCAGCTGGGATGCTTG +
Preference number: 3 (lower is better)
Translates to: RECISATGPSFQFLVHPTTSRSW*LQLGCL
Trigger: CAAGCATCCCAGCTGCAGCAACCAGGACCGACTTGT...TGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR GCA 72 bp ACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTaGCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCC +
Preference number: 3 (lower is better)
Translates to: TNRMETGPRVHL*HWSQFPVSGAS
Trigger: GGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307089.7
ENST00000474844.5
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
3UTR-3UTR CAA 90 bp TCAGATCTTCCACCTGTACCTGGATGCTGTATTGATTGGCCAGGAGCTCAATGGACATGGCCTCCTGGTTaGGTGGCAAGGAGTCCAGCC +
Preference number: 3 (lower is better)
Translates to: SDLPPVPGCCIDWPGAQWTWPPG*VARSPA
Trigger: GGCTGGACTCCTTGCCACCAAACCAGGAGGCCATGT...CCATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTACAGGTGGAAGATCTGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CAA 90 bp CTGGCTATTCGGGACGGGGAGAGATCATTGGCAGCAAGATTGCGGCAACAGCCATCATTCACAAAATCCTaGGCACTCAGCTGCTCCAGC +
Preference number: 3 (lower is better)
Translates to: LAIRDGERSLAARLRQQPSFTKS*ALSCSS
Trigger: GCTGGAGCAGCTGAGTGCCAAGGATTTTGTGAATGA...TGGCTGTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTCCCGAATAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
3UTR-3UTR CAA 90 bp CTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTCAGACCCCAGAAAGGTaGGATAAGGAGGGCCCACAG +
Preference number: 3 (lower is better)
Translates to: LCHWSQFPVSGASNRVYPQTPER*DKEGPQ
Trigger: CTGTGGGCCCTCCTTATCCAACCTTTCTGGGGTCTG...AGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR TCA 72 bp AGATCATTGGCAGCAAGATTGCGGCAACAGCCAGTCTaGAGCAACGCTAGTGTCTTTCCCCCAGGAGCTGCA +
Preference number: 3 (lower is better)
Translates to: RSLAARLRQQPV*SNASVFPPGAA
Trigger: TGCAGCTCCTGGGGGAAAGACACTAGCGTTGCTTCAGACTGGCTGTTGCCGCAATCTTGCTGCCAATGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR GCA 72 bp TTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTGCACTTaGAGCACAGGCAATATCTGTCGCTCCTTCTTCCTT +
Preference number: 3 (lower is better)
Translates to: LVARSPAARSCT*STGNICRSFFL
Trigger: AAGGAAGAAGGAGCGACAGATATTGCCTGTGCTGCAAGTGCAGCTTCTTGCGGCTGGACTCCTTGCCACCAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR GCA 72 bp AGTACTATACAGAGTGAACAGCATGCAGGGACCATATaGCACGCACGGAGGCGGTTACGGTCCTACTCAGAG +
Preference number: 3 (lower is better)
Translates to: STIQSEQHAGTI*HARRRLRSYSE
Trigger: CTCTGAGTAGGACCGTAACCGCCTCCGTGCGTGGCATATGGTCCCTGCATGCTGTTCACTCTGTATAGTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR CCA 72 bp GCTGCAGATTGGCCACCCTCAGACTGCAGTTCCCAGTaGGAGATGGCTTCATTCACAAAATCCTTGGCACTC +
Preference number: 3 (lower is better)
Translates to: AADWPPSDCSSQ*EMASFTKSLAL
Trigger: GAGTGCCAAGGATTTTGTGAATGAAGCCATCTCCCACTGGGAACTGCAGTCTGAGGGTGGCCAATCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
3UTR CCA 72 bp TCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATTaGCAGCAAGATTGCGGCAACAGCCAGTCTGAAGCA +
Preference number: 3 (lower is better)
Translates to: SVVWLFGTGRDH*QQDCGNSQSEA
Trigger: TGCTTCAGACTGGCTGTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR CCA 72 bp GGTCATGCTGGGAGAGTTCCCAGACCCCAGAAAGGTTaGATAAGGAGGGCCCACAGAATCTTGAGGTGTGAA +
Preference number: 3 (lower is better)
Translates to: GHAGRVPRPQKG*IRRAHRILRCE
Trigger: TTCACACCTCAAGATTCTGTGGGCCCTCCTTATCCAACCTTTCTGGGGTCTGGGAACTCTCCCAGCATGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CAA 90 bp GCAAGGAGTCCAGCCGCAAGAAGCTGCACTTGCAGCACAGGCAATATCTGTCGCTTCTTGCTTCAGGGATaGGGTGATACTATGTCAGCC +
Preference number: 3 (lower is better)
Translates to: ARSPAARSCTCSTGNICRFLLQG*GDTMSA
Trigger: GGCTGACATAGTATCACCCAATCCCTGAAGCAAGAA...GCGACAGATATTGCCTGTGCTGCAAGTGCAGCTTCTTGCGGCTGGACTCCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CAA 90 bp GCAGAAGTACATGGGGCCAAAATTGGCCATGAGGTTTGGTATTACCAGCTCCCCGACGGGGAGAGATCATaGGCAGCAAGATTGCGGCAA +
Preference number: 3 (lower is better)
Translates to: AEVHGAKIGHEVWYYQLPDGERS*AARLRQ
Trigger: TTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTC...GGGGAGCTGGTAATACCAAACCTCATGGCCAATTTTGGCCCCATGTACTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR TCA 72 bp GTCCCCCTCCAGTTCTCCCCATTTCCTGCCATCCCATaGGGTAACTCGAACTTGATTTCCATCCCTGATCTC +
Preference number: 3 (lower is better)
Translates to: VPLQFSPFPAIP*GNSNLISIPDL
Trigger: GAGATCAGGGATGGAAATCAAGTTCGAGTTACCTCATGGGATGGCAGGAAATGGGGAGAACTGGAGGGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR TCA 72 bp TTCCTTGACCGCTTAAAGATGTTGTTCTCCTCCTCATaGAGGGAGTGGCGGTCTGTGGTACAGGGCACATCC +
Preference number: 3 (lower is better)
Translates to: FLDRLKMLFSSS*REWRSVVQGTS
Trigger: GGATGTGCCCTGTACCACAGACCGCCACTCCCTTCATGAGGAGGAGAACAACATCTTTAAGCGGTCAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR TCA 72 bp CCCTCATTTCTTGTTATGGTGAGGACTCTTGCTCTGTaGCTTTTGCCTCGCTGGGACTCTTGCTCTGGCTCC +
Preference number: 3 (lower is better)
Translates to: PSFLVMVRTLAL*LLPRWDSCSGS
Trigger: GGAGCCAGAGCAAGAGTCCCAGCGAGGCAAAAGTCACAGAGCAAGAGTCCTCACCATAACAAGAAATGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR TCA 72 bp CAGGCTGCCAGGTATGATCCCAGGCAGCAAAGTTATTaGCCAGTGCACCATACTTCTGCTCTGAGAGGAGAC +
Preference number: 3 (lower is better)
Translates to: QAARYDPRQQSY*PVHHTSALRGD
Trigger: GTCTCCTCTCAGAGCAGAAGTATGGTGCACTGGTCAATAACTTTGCTGCCTGGGATCATACCTGGCAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495427.1
3UTR GCA 72 bp AGAAAGACACGAACAGGATGGAGACAGGACCGAGAGTaGATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTG +
Preference number: 3 (lower is better)
Translates to: RKTRTGWRQDRE*ISATGPSFQFL
Trigger: CAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTGTCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307089.7
ENST00000474844.5
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
3UTR GCA 72 bp TGGAAAAACCAGGCGGGCTTAATTGAGCCTGTTGGCTaGTCAAGACTGGTCAGGTGGAACTCACTTCAAGGG +
Preference number: 3 (lower is better)
Translates to: WKNQAGLIEPVG*SRLVRWNSLQG
Trigger: CCCTTGAAGTGAGTTCCACCTGACCAGTCTTGAGCAGCCAACAGGCTCAATTAAGCCCGCCTGGTTTTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR GCA 72 bp GCTCTGGCCCTCATTTCTTGTTATGGTGAGGACTCTTaGTCTGTGACTTTTGCCTCGCTGGGACTCTTGCTC +
Preference number: 3 (lower is better)
Translates to: ALALISCYGEDS*SVTFASLGLLL
Trigger: GAGCAAGAGTCCCAGCGAGGCAAAAGTCACAGAGCAAGAGTCCTCACCATAACAAGAAATGAGGGCCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR GCA 72 bp CTTCAGATGAGGAGTGCACAAGTCGGTCCTGGTTGCTaGAGCTGGGATGCTTGCTATAGCTGGCAATCTTGT +
Preference number: 3 (lower is better)
Translates to: LQMRSAQVGPGC*SWDACYSWQSC
Trigger: ACAAGATTGCCAGCTATAGCAAGCATCCCAGCTGCAGCAACCAGGACCGACTTGTGCACTCCTCATCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR GCA 72 bp AGACTTCAGATGAGGAGTGCACAAGTCGGTCCTGGTTaGTGCAGCTGGGATGCTTGCTATAGCTGGCAATCT +
Preference number: 3 (lower is better)
Translates to: RLQMRSAQVGPG*CSWDACYSWQS
Trigger: AGATTGCCAGCTATAGCAAGCATCCCAGCTGCAGCAACCAGGACCGACTTGTGCACTCCTCATCTGAAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR CCA 72 bp GGTCCTGGTTGCTGCAGCTGGGATGCTTGCTATAGCTaGCAATCTTGTTACTATCTATGCCTTGCTCTGGCC +
Preference number: 3 (lower is better)
Translates to: GPGCCSWDACYS*QSCYYLCLALA
Trigger: GGCCAGAGCAAGGCATAGATAGTAACAAGATTGCCAGCTATAGCAAGCATCCCAGCTGCAGCAACCAGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CAA 90 bp CTTCCACCTGTACCTGGATGCTGTATTGATTGGCCAGGAGCTCAATGGCACCTTCGCAAGAAGCTGCACTaGCAGCACAGGCAATATCTG +
Preference number: 3 (lower is better)
Translates to: LPPVPGCCIDWPGAQWHLRKKLH*QHRQYL
Trigger: CAGATATTGCCTGTGCTGCAAGTGCAGCTTCTTGCG...AAGGTGCCATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTACAGGTGGAAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CAA 90 bp CTTCCACCTGTACCTGGATGCTGTATTGATTGGCCAGGAGCTCAATGGCACCTTGTCAGCCTACGCATTTaGCAGAAGTACATGGGGCCA +
Preference number: 3 (lower is better)
Translates to: LPPVPGCCIDWPGAQWHLVSLRI*QKYMGP
Trigger: TGGCCCCATGTACTTCTGCAAAATGCGTAGGCTGAC...AAGGTGCCATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTACAGGTGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CAA 90 bp CGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGCTGATGCTCCACAATaGGACAGCAGGACAGCAAAT +
Preference number: 3 (lower is better)
Translates to: RECISATGPSFQFLVHPTADAPQ*DSRTAN
Trigger: ATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGC...TGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307089.7
ENST00000474844.5
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
3UTR-3UTR CAA 90 bp TCTCCTTCTAAGCCCCTAAGCGGGCAGCAAACTTTAGTACAGGCCTGGAGATGGCTTAGAATCAGAGGTTaGAGGGTCATGCTGGGAGAG +
Preference number: 3 (lower is better)
Translates to: SPSKPLSGQQTLVQAWRWLRIRG*RVMLGE
Trigger: CTCTCCCAGCATGACCCTCAAACCTCTGATTCTAAG...CCATCTCCAGGCCTGTACTAAAGTTTGCTGCCCGCTTAGGGGCTTAGAAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CAA 90 bp AATAGACAACATGGCCTCCTGGTTTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTTACCTGGATGCTGTATaGATTGGCCAGGAGCTCAAT +
Preference number: 3 (lower is better)
Translates to: NRQHGLLVWWQGVQPQEAYLDAV*IGQELN
Trigger: ATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTA...AGCTTCTTGCGGCTGGACTCCTTGCCACCAAACCAGGAGGCCATGTTGTCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CAA 90 bp GGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTTACATGGGGCCAAAATaGGCCATGAGGTTTGGTATT +
Preference number: 3 (lower is better)
Translates to: GWRQDRECISATGPSFQFYMGPK*AMRFGI
Trigger: AATACCAAACCTCATGGCCAATTTTGGCCCCATGTA...AAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CAA 90 bp GGCCGAGGGCCAGAACAGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCCAATCTTCTACTTCTTATaGCCGAAAACTGCAGAAAGA +
Preference number: 3 (lower is better)
Translates to: GRGPEQAARRQHPSGSTPIFYFL*PKTAER
Trigger: TCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGAT...TGGAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCTGTTCTGGCCCTCGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CAA 90 bp TCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCCTTAGAATCAGAGGTTaGAGGGTCATGCTGGGAGAG +
Preference number: 3 (lower is better)
Translates to: SLPLVPVSSFWCIQQSIPLRIRG*RVMLGE
Trigger: CTCTCCCAGCATGACCCTCAAACCTCTGATTCTAAG...GGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR TCA 72 bp TGCTCAAGACTGGTCAGGTGGAACTCACTTCAAGGGTaGCAGGGGCTCAGTAACTGGCTGGTACAAATGGAA +
Preference number: 3 (lower is better)
Translates to: CSRLVRWNSLQG*QGLSNWLVQME
Trigger: TTCCATTTGTACCAGCCAGTTACTGAGCCCCTGTCACCCTTGAAGTGAGTTCCACCTGACCAGTCTTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR CCA 72 bp CTTCAGGCACATAGCTGTGAAGGATCTTCTGTAGTCTaGCTATTCGGGACGGGGAGAGATCATTGGCAGCAA +
Preference number: 3 (lower is better)
Translates to: LQAHSCEGSSVV*LFGTGRDHWQQ
Trigger: TTGCTGCCAATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTCACAGCTATGTGCCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CAA 90 bp AGCTGTGAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATTGGTACCTGGATGCTGTATaGATTGGCCAGGAGCTCAAT +
Preference number: 3 (lower is better)
Translates to: SCEGSSVVWLFGTGRDHWYLDAV*IGQELN
Trigger: ATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTA...CCAATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTCACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CAA 90 bp CATAGCTGTGAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATTCATTCACAAAATCCTaGGCACTCAGCTGCTCCAGC +
Preference number: 3 (lower is better)
Translates to: HSCEGSSVVWLFGTGRDHSFTKS*ALSCSS
Trigger: GCTGGAGCAGCTGAGTGCCAAGGATTTTGTGAATGA...ATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTCACAGCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
3UTR-3UTR CAA 90 bp GATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGAACAGACCCCAGAAAGGTaGGATAAGGAGGGCCCACAG +
Preference number: 3 (lower is better)
Translates to: DAPQLDSRTANLLLLIAEQTPER*DKEGPQ
Trigger: CTGTGGGCCCTCCTTATCCAACCTTTCTGGGGTCTG...TTCGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR TCA 72 bp ATCATGAGCCATATGGAAAAACCAGGCGGGCTTAATTaGGCCTGTTGGCTGCTCAAGACTGGTCAGGTGGAA +
Preference number: 3 (lower is better)
Translates to: IMSHMEKPGGLN*ACWLLKTGQVE
Trigger: TTCCACCTGACCAGTCTTGAGCAGCCAACAGGCTCAATTAAGCCCGCCTGGTTTTTCCATATGGCTCATGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR TCA 72 bp CTCTTAGCCTCAGCGAATACTAAGTACTATACAGAGTaGACAGCATGCAGGGACCATATGCCACGCACGGAG +
Preference number: 3 (lower is better)
Translates to: LLASANTKYYTE*TACRDHMPRTE
Trigger: CTCCGTGCGTGGCATATGGTCCCTGCATGCTGTTCACTCTGTATAGTACTTAGTATTCGCTGAGGCTAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR GCA 72 bp TTCGGAAGTGAGTCAGATCTTCCACCTGTACCTGGATaGTGTATTGATTGGCCAGGAGCTCAATGGCACCTT +
Preference number: 3 (lower is better)
Translates to: FGSESDLPPVPG*CIDWPGAQWHL
Trigger: AAGGTGCCATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTACAGGTGGAAGATCTGACTCACTTCCGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR CCA 72 bp GTACCTGGATGCTGTATTGATTGGCCAGGAGCTCAATaGCACCTTGCACCACATACTCGTTCTGTAAGTGTG +
Preference number: 3 (lower is better)
Translates to: VPGCCIDWPGAQ*HLAPHTRSVSV
Trigger: CACACTTACAGAACGAGTATGTGGTGCAAGGTGCCATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR CCA 72 bp TCAGATCTTCCACCTGTACCTGGATGCTGTATTGATTaGCCAGGAGCTCAATGGCACCTTGCACCACATACT +
Preference number: 3 (lower is better)
Translates to: SDLPPVPGCCID*PGAQWHLAPHT
Trigger: AGTATGTGGTGCAAGGTGCCATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTACAGGTGGAAGATCTGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR CCA 72 bp GAATTACCACTGCTTAGCATTCAATTAGCACTAGGCTaGATATCCAGGAGTCCAAGGGCAGAAGCCCAGGCA +
Preference number: 3 (lower is better)
Translates to: ELPLLSIQLALG*ISRSPRAEAQA
Trigger: TGCCTGGGCTTCTGCCCTTGGACTCCTGGATATCCAGCCTAGTGCTAATTGAATGCTAAGCAGTGGTAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR-3UTR CAA 90 bp TGGAAACCTGCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTGTCAGCCTACGCATTTaGCAGAAGTACATGGGGCCA +
Preference number: 3 (lower is better)
Translates to: WKPADAPQLDSRTANLLLVSLRI*QKYMGP
Trigger: TGGCCCCATGTACTTCTGCAAAATGCGTAGGCTGAC...AAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGCAGGTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CAA 90 bp TCAGATCTTCCACCTGTACCTGGATGCTGTATTGATTGGCCAGGAGCTCAATGGTTCTTGCTTCAGGGATaGGGTGATACTATGTCAGCC +
Preference number: 3 (lower is better)
Translates to: SDLPPVPGCCIDWPGAQWFLLQG*GDTMSA
Trigger: GGCTGACATAGTATCACCCAATCCCTGAAGCAAGAA...CCATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTACAGGTGGAAGATCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR TCA 72 bp AGGTTGGATAAGGAGGGCCCACAGAATCTTGAGGTGTaGACCAAAACAGGGACTTCTAGGATGACTGCTATG +
Preference number: 3 (lower is better)
Translates to: RLDKEGPQNLEV*TKTGTSRMTAM
Trigger: CATAGCAGTCATCCTAGAAGTCCCTGTTTTGGTTCACACCTCAAGATTCTGTGGGCCCTCCTTATCCAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CAA 90 bp GTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTAATACCCTTTGTATTCTaGCTTCAGGGATTGGGTGAT +
Preference number: 3 (lower is better)
Translates to: VHLCHWSQFPVSGASNRVIPFVF*LQGLGD
Trigger: ATCACCCAATCCCTGAAGCAAGAATACAAAGGGTAT...TACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307089.7
ENST00000474844.5
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
3UTR-3UTR CAA 90 bp TCTCCTTCTAAGCCCCTAAGCGGGCAGCAAACTTTAGTACAGGCCTGGAGATGGAACAGAGTATACCCTTaGTATTCTTGCTTCAGGGAT +
Preference number: 3 (lower is better)
Translates to: SPSKPLSGQQTLVQAWRWNRVYP*YSCFRD
Trigger: ATCCCTGAAGCAAGAATACAAAGGGTATACTCTGTT...CCATCTCCAGGCCTGTACTAAAGTTTGCTGCCCGCTTAGGGGCTTAGAAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307089.7
ENST00000474844.5
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
3UTR-3UTR CAA 90 bp TTCCTAGCTTCACCTGATTTTGAGTCTCAGAGATCTTCCAGGGCCCTCAATTACGCTGATGCTCCACAATaGGACAGCAGGACAGCAAAT +
Preference number: 3 (lower is better)
Translates to: FLASPDFESQRSSRALNYADAPQ*DSRTAN
Trigger: ATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGC...GTAATTGAGGGCCCTGGAAGATCTCTGAGACTCAAAATCAGGTGAAGCTAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR-3UTR CAA 90 bp CATAGCTGTGAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATCTCTGGCCTAGATTTTaGGTCTGGTCAGAACTTTTG +
Preference number: 3 (lower is better)
Translates to: HSCEGSSVVWLFGTGRDHLWPRF*VWSELL
Trigger: CAAAAGTTCTGACCAGACCAAAAATCTAGGCCAGAG...ATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTCACAGCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CAA 90 bp GAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATTGGCAGCAAGTTACTATCTATGCCTaGCTCTGGCCTAGATTTTTG +
Preference number: 3 (lower is better)
Translates to: EGSSVVWLFGTGRDHWQQVTIYA*LWPRFL
Trigger: CAAAAATCTAGGCCAGAGCAAGGCATAGATAGTAAC...TTGCTGCCAATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CAA 90 bp TCTCCTTCTAAGCCCCTAAGCGGGCAGCAAACTTTAGTACAGGCCTGGAGATGGATCTTCTACTTCTTATaGCCGAAAACTGCAGAAAGA +
Preference number: 3 (lower is better)
Translates to: SPSKPLSGQQTLVQAWRWIFYFL*PKTAER
Trigger: TCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGAT...CCATCTCCAGGCCTGTACTAAAGTTTGCTGCCCGCTTAGGGGCTTAGAAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307089.7
ENST00000474844.5
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
3UTR-3UTR CAA 90 bp CACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTATGTCTGGTCAGAACTTTaGCTCTGGCCCTCATTTCTT +
Preference number: 3 (lower is better)
Translates to: HWSQFPVSGASNRVYPLYVWSEL*LWPSFL
Trigger: AAGAAATGAGGGCCAGAGCAAAAGTTCTGACCAGAC...ATACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CAA 90 bp GTATTCTTGCTTCAGGGATTGGGTGATACTATGTCAGCCTACGCATTTTGCAGAAGGGCCCACAGAATCTaGAGGTGTGAACCAAAACAG +
Preference number: 3 (lower is better)
Translates to: VFLLQGLGDTMSAYAFCRRAHRI*RCEPKQ
Trigger: CTGTTTTGGTTCACACCTCAAGATTCTGTGGGCCCT...TCTGCAAAATGCGTAGGCTGACATAGTATCACCCAATCCCTGAAGCAAGAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR TCA 72 bp TGCACATGTGGACTGCACTGCAAAGTGCCTTTGGATTaGATCATCATGATCTATGTGAGGCATCCATCCTGG +
Preference number: 3 (lower is better)
Translates to: CTCGLHCKVPLD*IIMIYVRHPSW
Trigger: CCAGGATGGATGCCTCACATAGATCATGATGATTCAATCCAAAGGCACTTTGCAGTGCAGTCCACATGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR CCA 72 bp TCAGGAATCTCAGAATTCCCAAATACAAGCTCCCCATaGTCCTTATGCACATGTGGACTGCACTGCAAAGTG +
Preference number: 3 (lower is better)
Translates to: SGISEFPNTSSP*SLCTCGLHCKV
Trigger: CACTTTGCAGTGCAGTCCACATGTGCATAAGGACCATGGGGAGCTTGTATTTGGGAATTCTGAGATTCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR-3UTR CAA 90 bp AACAGAGTATACCCTTTGTATTCTTGCTTCAGGGATTGGGTGATACTATGTCAGGAGCTCAATGGCACCTaGCACCACATACTCGTTCTG +
Preference number: 3 (lower is better)
Translates to: NRVYPLYSCFRDWVILCQELNGT*HHILVL
Trigger: CAGAACGAGTATGTGGTGCAAGGTGCCATTGAGCTC...CTGACATAGTATCACCCAATCCCTGAAGCAAGAATACAAAGGGTATACTCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR TCA 72 bp ACCTGTCATACACGAGGTCTGGGAATACCTGCTAGATaGATGAACAAAGAACAAGGCACGCACAAGAGTATG +
Preference number: 3 (lower is better)
Translates to: TCHTRGLGIPAR*MNKEQGTHKSM
Trigger: CATACTCTTGTGCGTGCCTTGTTCTTTGTTCATTCATCTAGCAGGTATTCCCAGACCTCGTGTATGACAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR CCA 72 bp ATCATCATGATCTATGTGAGGCATCCATCCTGGTTTTaGAAGAGCTCAAATCAGAAGTTCCCAGCAGGGCTT +
Preference number: 3 (lower is better)
Translates to: IIMIYVRHPSWF*KSSNQKFPAGL
Trigger: AAGCCCTGCTGGGAACTTCTGATTTGAGCTCTTCCAAAACCAGGATGGATGCCTCACATAGATCATGATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR CCA 72 bp TGGCCTAGATTTTTGGTCTGGTCAGAACTTTTGCTCTaGCCCTCATTTCTTGTTATGGTGAGGACTCTTGCT +
Preference number: 3 (lower is better)
Translates to: WPRFLVWSELLL*PSFLVMVRTLA
Trigger: AGCAAGAGTCCTCACCATAACAAGAAATGAGGGCCAGAGCAAAAGTTCTGACCAGACCAAAAATCTAGGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CAA 90 bp GATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGAATACATGGGGCCAAAATaGGCCATGAGGTTTGGTATT +
Preference number: 3 (lower is better)
Translates to: DAPQLDSRTANLLLLIAEYMGPK*AMRFGI
Trigger: AATACCAAACCTCATGGCCAATTTTGGCCCCATGTA...TTCGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CAA 90 bp TTTGCAGAAGTACATGGGGCCAAAATTGGCCATGAGGTTTGGTATTACCAGCTCATACCCTTTGTATTCTaGCTTCAGGGATTGGGTGAT +
Preference number: 3 (lower is better)
Translates to: FAEVHGAKIGHEVWYYQLIPFVF*LQGLGD
Trigger: ATCACCCAATCCCTGAAGCAAGAATACAAAGGGTAT...GAGCTGGTAATACCAAACCTCATGGCCAATTTTGGCCCCATGTACTTCTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR TCA 72 bp TTCAGAAAGCAAAAGGAGAGTTACCATTCTAAAGGATaGGGAAGCCCAGTAATCTCCCACAATCCCAACTGC +
Preference number: 3 (lower is better)
Translates to: FRKQKESYHSKG*GSPVISHNPNC
Trigger: GCAGTTGGGATTGTGGGAGATTACTGGGCTTCCTCATCCTTTAGAATGGTAACTCTCCTTTTGCTTTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR GCA 72 bp ATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTaGCGAAAACTGCAGAAAGACACGAACAGGATGGAG +
Preference number: 3 (lower is better)
Translates to: IGQQDSKSSTSY*RKLQKDTNRME
Trigger: CTCCATCCTGTTCGTGTCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307089.7
ENST00000474844.5
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
3UTR-3UTR CAA 90 bp AACAGAGTATACCCTTTGTATTCTTGCTTCAGGGATTGGGTGATACTATGTCAGGTCTGGTCAGAACTTTaGCTCTGGCCCTCATTTCTT +
Preference number: 3 (lower is better)
Translates to: NRVYPLYSCFRDWVILCQVWSEL*LWPSFL
Trigger: AAGAAATGAGGGCCAGAGCAAAAGTTCTGACCAGAC...CTGACATAGTATCACCCAATCCCTGAAGCAAGAATACAAAGGGTATACTCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR TCA 72 bp GAGTATACCCTTTGTATTCTTGCTTCAGGGATTGGGTaGTACTATGTCAGCCTACGCATTTTGCAGAAGTAC +
Preference number: 3 (lower is better)
Translates to: EYTLCILASGIG*YYVSLRILQKY
Trigger: GTACTTCTGCAAAATGCGTAGGCTGACATAGTATCACCCAATCCCTGAAGCAAGAATACAAAGGGTATACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR-3UTR CAA 90 bp GTCCTTATGCACATGTGGACTGCACTGCAAAGTGCCTTTGGATTGAATCATCATAACAGAGTATACCCTTaGTATTCTTGCTTCAGGGAT +
Preference number: 3 (lower is better)
Translates to: VLMHMWTALQSAFGLNHHNRVYP*YSCFRD
Trigger: ATCCCTGAAGCAAGAATACAAAGGGTATACTCTGTT...ATGATGATTCAATCCAAAGGCACTTTGCAGTGCAGTCCACATGTGCATAAGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR CCA 72 bp AACAGAGTATACCCTTTGTATTCTTGCTTCAGGGATTaGGTGATACTATGTCAGCCTACGCATTTTGCAGAA +
Preference number: 3 (lower is better)
Translates to: NRVYPLYSCFRD*VILCQPTHFAE
Trigger: TTCTGCAAAATGCGTAGGCTGACATAGTATCACCCAATCCCTGAAGCAAGAATACAAAGGGTATACTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR CCA 72 bp TGCTCTGGCCATGTAATCAAGCCAGACATACGTAACTaGTTAGACCAGCTGCAAATAATCAATAAAAGGAGT +
Preference number: 3 (lower is better)
Translates to: CSGHVIKPDIRN*LDQLQIINKRS
Trigger: ACTCCTTTTATTGATTATTTGCAGCTGGTCTAACCAGTTACGTATGTCTGGCTTGATTACATGGCCAGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR CCA 72 bp AATAGGGTTGCTATGAATATTCTTGTACACATCTCCTaGTGTACATGTATGAGTTTCTCTAGGATTTATCCC +
Preference number: 3 (lower is better)
Translates to: NRVAMNILVHIS*CTCMSFSRIYP
Trigger: GGGATAAATCCTAGAGAAACTCATACATGTACACCAGGAGATGTGTACAAGAATATTCATAGCAACCCTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR GCA 90 bp GGAGGCAGCATCCATCAGGTAGTACTCCATGACACCCAGGCTGCCAGGTCTGGCGGCAGGGGATGGGGCTaGAGATTGGCCACCCTCAGA +
Preference number: 4 (lower is better)
Translates to: GGSIHQVVLHDTQAARSGGRGWG*RLATLR
Trigger: TCTGAGGGTGGCCAATCTGCAGCCCCATCCCCTGCC...GCCAGACCTGGCAGCCTGGGTGTCATGGAGTACTACCTGATGGATGCTGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
CDS-3UTR CCA 90 bp GGAGGCAGCATCCATCAGGTAGTACTCCATGACACCCAGGCTGCCAGGTCTGGCCCTCCTGAGGTGAGCTaGGAGAGCCAGGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: GGSIHQVVLHDTQAARSGPPEVS*ESQACL
Trigger: CAGGCATGCCTGGCTCTCCCAGCTCACCTCAGGAGG...GCCAGACCTGGCAGCCTGGGTGTCATGGAGTACTACCTGATGGATGCTGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CCA 90 bp GACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCGGTGGGGGACAGGTGTaGGCCTTAGCGGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: DRTESASLPLVPVSSFWCGGGQV*ALAGLG
Trigger: GCCCAAGCCCGCTAAGGCCCACACCTGTCCCCCACC...GCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR GCA 90 bp CACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTGGCAGGGGATGGGGCTaGAGATTGGCCACCCTCAGA +
Preference number: 4 (lower is better)
Translates to: HEQDGDRTESASLPLVPVGRGWG*RLATLR
Trigger: TCTGAGGGTGGCCAATCTGCAGCCCCATCCCCTGCC...AACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp AGACAACATGGCCTCCTGGTTTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTGCAATCGAAGGTTCGGACTaGAGGCCCAGGAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: RQHGLLVWWQGVQPQEAAIEGSD*RPRRQG
Trigger: CCCCTGCCTCCTGGGCCTGCAGTCCGAACCTTCGAT...TGCAGCTTCTTGCGGCTGGACTCCTTGCCACCAAACCAGGAGGCCATGTTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307089.7
ENST00000498008.5
CDS-3UTR GCA 90 bp GACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCGAAGGTTCGGACTaGAGGCCCAGGAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: DRTESASLPLVPVSSFWCIEGSD*RPRRQG
Trigger: CCCCTGCCTCCTGGGCCTGCAGTCCGAACCTTCGAT...GCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp CAGCACCCGGTCATAGGTGTCCCCCTCCAGTTCTCCCCATTTCCTGCCATCCCAGCATTTGCACTGACATaGAGTCCCCAACTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: QHPVIGVPLQFSPFPAIPAFALT*SPQLQP
Trigger: GGGCTGCAGTTGGGGACTTCATGTCAGTGCAAATGC...TGGGATGGCAGGAAATGGGGAGAACTGGAGGGGGACACCTATGACCGGGTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR TCA 90 bp GGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGCTGACAGAGAGGGGGTaGCCCCGGAATGCTGAACTG +
Preference number: 4 (lower is better)
Translates to: GDRTESASLPLVPVSSFWLTERG*PRNAEL
Trigger: CAGTTCAGCATTCCGGGGTCACCCCCTCTCTGTCAG...CCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537428.2
CDS-3UTR GCA 90 bp AGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCCATGACACCCAGGCTGCCTGGCCACCCTCAGACTaGAGTTCCCAGTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: RQQGGSIHQVVLHDTQAAWPPSD*SSQWEM
Trigger: CATCTCCCACTGGGAACTGCAGTCTGAGGGTGGCCA...GGCAGCCTGGGTGTCATGGAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
CDS-3UTR GCA 90 bp CAGGCCGAGGGCCAGAACAGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCCCAGCCGCAAGAAGCTaGACTTGCAGCACAGGCAAT +
Preference number: 4 (lower is better)
Translates to: QAEGQNRQQGGSIHQVVLPAARS*TCSTGN
Trigger: ATTGCCTGTGCTGCAAGTGCAGCTTCTTGCGGCTGG...GAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCTGTTCTGGCCCTCGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp CACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTGCGGAGACCCAGGAGTaGAGGCAAGGTCGCTATGGT +
Preference number: 4 (lower is better)
Translates to: HEQDGDRTESASLPLVPVAETQE*RQGRYG
Trigger: ACCATAGCGACCTTGCCTGCACTCCTGGGTCTCCGC...AACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537428.2
CDS-3UTR GCA 90 bp GGTCATGCTGGGAGAGTTCCCAGACCCCAGAAAGGTTGGATAAGGAGGGCCCACCAAGTCGGTCCTGGTTaGTGCAGCTGGGATGCTTGC +
Preference number: 4 (lower is better)
Translates to: GHAGRVPRPQKGWIRRAHQVGPG*CSWDAC
Trigger: GCAAGCATCCCAGCTGCAGCAACCAGGACCGACTTG...GTGGGCCCTCCTTATCCAACCTTTCTGGGGTCTGGGAACTCTCCCAGCATGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp GGCCGAGGGCCAGAACAGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCCACATCATGGGGACTCTTaGTTTGGCTCCGGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: GRGPEQAARRQHPSGSTPHHGDS*FGSGFG
Trigger: GCCAAAGCCGGAGCCAAAGCAAGAGTCCCCATGATG...TGGAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCTGTTCTGGCCCTCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp GGAGTGGCGGTCTGTGGTACAGGGCACATCCACCAGCACCCGGTCATAGGTGTCGCCATCATAGACTCTTaGTCTTGCCCTGACCTCTGC +
Preference number: 4 (lower is better)
Translates to: GVAVCGTGHIHQHPVIGVAIIDS*SCPDLC
Trigger: GCAGAGGTCAGGGCAAGAGCAAGAGTCTATGATGGC...GACACCTATGACCGGGTGCTGGTGGATGTGCCCTGTACCACAGACCGCCACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp CAGGCCGAGGGCCAGAACAGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCCCTCGCTGGGACTCTTaGTCTGGCTCCTGCTATGTT +
Preference number: 4 (lower is better)
Translates to: QAEGQNRQQGGSIHQVVLPRWDS*SGSCYV
Trigger: AACATAGCAGGAGCCAGAGCAAGAGTCCCAGCGAGG...GAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCTGTTCTGGCCCTCGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp AGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCCATGACACCCAGGCTGCCGCTGGTCACAGTACGTaGCTTGAAGACAGGGACGCC +
Preference number: 4 (lower is better)
Translates to: RQQGGSIHQVVLHDTQAAAGHST*LEDRDA
Trigger: GGCGTCCCTGTCTTCAAGGCACGTACTGTGACCAGC...GGCAGCCTGGGTGTCATGGAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CCA 90 bp AGACAACATGGCCTCCTGGTTTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTGCACATGGCCTCCTGGTTTaGTGGCAAGGAGTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: RQHGLLVWWQGVQPQEAAHGLLV*WQGVQP
Trigger: CGGCTGGACTCCTTGCCACCAAACCAGGAGGCCATG...TGCAGCTTCTTGCGGCTGGACTCCTTGCCACCAAACCAGGAGGCCATGTTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp GACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCCATGGCCTCCTGGTTTaGTGGCAAGGAGTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: DRTESASLPLVPVSSFWCHGLLV*WQGVQP
Trigger: CGGCTGGACTCCTTGCCACCAAACCAGGAGGCCATG...GCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp GGAGTGGCGGTCTGTGGTACAGGGCACATCCACCAGCACCCGGTCATAGGTGTCACGGGGAGAGATCATTaGCAGCAAGATTGCGGCAAC +
Preference number: 4 (lower is better)
Translates to: GVAVCGTGHIHQHPVIGVTGRDH*QQDCGN
Trigger: GTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGT...GACACCTATGACCGGGTGCTGGTGGATGTGCCCTGTACCACAGACCGCCACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp TCATGCTGGGAGAGTTCCCAGACCCCAGAAAGGTTGGATAAGGAGGGCCCACAGGTTGGGGTGGGCCCCTaGGAGTGCTATAGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: SCWESSQTPERLDKEGPQVGVGP*ECYRCH
Trigger: GTGACACCTATAGCACTCCCAGGGGCCCACCCCAAC...CTGTGGGCCCTCCTTATCCAACCTTTCTGGGGTCTGGGAACTCTCCCAGCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CCA 90 bp GGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGGGGTGGAAGAGATGGTaGAGGTGGCGAGGGAATCGG +
Preference number: 4 (lower is better)
Translates to: GDRTESASLPLVPVSSFWGWKRW*RWRGNR
Trigger: CCGATTCCCTCGCCACCTCCACCATCTCTTCCACCC...CCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537428.2
CDS-3UTR TCA 90 bp CTGGCTATTCGGGACGGGGAGAGATCATTGGCAGCAAGATTGCGGCAACAGCCATCAGGTAGTACTCCATaGCACCCAGGCTGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: LAIRDGERSLAARLRQQPSGSTP*HPGCQV
Trigger: GACCTGGCAGCCTGGGTGTCATGGAGTACTACCTGA...TGGCTGTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTCCCGAATAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
CDS-3UTR TCA 90 bp CGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCTCAGGTAGTACTCCATaGCACCCAGGCTGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: RTGWRQDRECISATGPSFSGSTP*HPGCQV
Trigger: GACCTGGCAGCCTGGGTGTCATGGAGTACTACCTGA...GAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp CAGCACCCGGTCATAGGTGTCCCCCTCCAGTTCTCCCCATTTCCTGCCATCCCATGTCCGGGGTTAGGATaGGGTAAGAGTTCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: QHPVIGVPLQFSPFPAIPCPGLG*GKSSQL
Trigger: CAACTGGGAACTCTTACCTCATCCTAACCCCGGACA...TGGGATGGCAGGAAATGGGGAGAACTGGAGGGGGACACCTATGACCGGGTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR GCA 90 bp GGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGGCCACCCTCAGACTaGAGTTCCCAGTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: GDRTESASLPLVPVSSFWWPPSD*SSQWEM
Trigger: CATCTCCCACTGGGAACTGCAGTCTGAGGGTGGCCA...CCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp CAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTCATGCAGGGACCATATaGCACGCACGGAGGCGGTTA +
Preference number: 4 (lower is better)
Translates to: QDGDRTESASLPLVPVSSHAGTI*HARRRL
Trigger: TAACCGCCTCCGTGCGTGGCATATGGTCCCTGCATG...ACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR GCA 90 bp ACACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTGGAGTCTCACTCTCTTaGCCAGGCTGCTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: TRTGWRQDRECISATGPSGVSLS*PGCSLQ
Trigger: CTGCAGTGAGCAGCCTGGGCAAGAGAGTGAGACTCC...ACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR GCA 90 bp AGACAACATGGCCTCCTGGTTTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTGCATGGCCAGAAGGGGTGTaGTGGGGAGTGTTGACTAGG +
Preference number: 4 (lower is better)
Translates to: RQHGLLVWWQGVQPQEAAWPEGV*WGVLTR
Trigger: CCTAGTCAACACTCCCCAGCACACCCCTTCTGGCCA...TGCAGCTTCTTGCGGCTGGACTCCTTGCCACCAAACCAGGAGGCCATGTTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR GCA 90 bp CAGGCCGAGGGCCAGAACAGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCAGGGTCCATGGCGGCTaGTCTGAGCATAACTATTGG +
Preference number: 4 (lower is better)
Translates to: QAEGQNRQQGGSIHQVVLRVHGG*SEHNYW
Trigger: CCAATAGTTATGCTCAGAGCAGCCGCCATGGACCCT...GAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCTGTTCTGGCCCTCGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CCA 90 bp GTCAAAAGTGAAGCATCGAAGGTTCGGACTGCAGGCCCAGGAGGCAGGGGATGGCTGGGACTCTTGCTCTaGCTCCTGCTATGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: VKSEASKVRTAGPGGRGWLGLLL*LLLCWG
Trigger: TCCCCAACATAGCAGGAGCCAGAGCAAGAGTCCCAG...CCATCCCCTGCCTCCTGGGCCTGCAGTCCGAACCTTCGATGCTTCACTTTTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CCA 90 bp GGCCGAGGGCCAGAACAGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCCAGGGCAGGTCAAGCTGTaGTTTGGGTTCACAAGAGTC +
Preference number: 4 (lower is better)
Translates to: GRGPEQAARRQHPSGSTPGQVKL*FGFTRV
Trigger: GACTCTTGTGAACCCAAACCACAGCTTGACCTGCCC...TGGAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCTGTTCTGGCCCTCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CCA 90 bp AGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGATAAGGGCTGGAGAGTaGGGAACCCGAGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RQDRECISATGPSFQFLVIRAGE*GTRVAG
Trigger: CCCTGCCACTCGGGTTCCCCACTCTCCAGCCCTTAT...CACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537428.2
CDS-3UTR CCA 90 bp GGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTAGGGACGCCGCATTCTaGAGGGACTCATCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GWRQDRECISATGPSFQFRDAAF*RDSSSC
Trigger: GCAGCTGGATGAGTCCCTCCAGAATGCGGCGTCCCT...AAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537428.2
CDS-3UTR TCA 90 bp CCCAGGCTGCCAGGTCTGGCAGGAGGGAAGCGACTGATATCCCCTCTGTCAAAAGCTCTGAGAGGAGACTaGCACGGATTGATGGCCAAA +
Preference number: 4 (lower is better)
Translates to: PRLPGLAGGKRLISPLSKALRGD*HGLMAK
Trigger: TTTGGCCATCAATCCGTGTCAGTCTCCTCTCAGAGC...TTTTGACAGAGGGGATATCAGTCGCTTCCCTCCTGCCAGACCTGGCAGCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
CDS-3UTR TCA 90 bp AGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCCATGACACCCAGGCTGCCGCTTCAGGGATTGGGTaGTACTATGTCAGCCTACGC +
Preference number: 4 (lower is better)
Translates to: RQQGGSIHQVVLHDTQAAASGIG*YYVSLR
Trigger: GCGTAGGCTGACATAGTATCACCCAATCCCTGAAGC...GGCAGCCTGGGTGTCATGGAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp GAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGTGGCCAGGCTGGTCTTaGACTCCTCCTGACCTCAGG +
Preference number: 4 (lower is better)
Translates to: ESASLPLVPVSSFWCIQQWPGWS*TPPDLR
Trigger: CCTGAGGTCAGGAGGAGTTCAAGACCAGCCTGGCCA...CTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR TCA 90 bp CCCAGGCTGCCAGGTCTGGCAGGAGGGAAGCGACTGATATCCCCTCTGTCAAAACGGCAACAGCCAGTCTaGAGCAACGCTAGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: PRLPGLAGGKRLISPLSKRQQPV*SNASVF
Trigger: AAAGACACTAGCGTTGCTTCAGACTGGCTGTTGCCG...TTTTGACAGAGGGGATATCAGTCGCTTCCCTCCTGCCAGACCTGGCAGCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
CDS-3UTR TCA 90 bp GGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCCAAGGGTACATGAGTaGGCTGAGGGGAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: GWRQDRECISATGPSFQFPRVHE*AEGRSL
Trigger: CAGTGACCTCCCCTCAGCTCACTCATGTACCCTTGG...AAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR TCA 90 bp AGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCCATGACACCCAGGCTGCCGTTTCCAAAACTCTGTaGGAAAGGGTTGGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: RQQGGSIHQVVLHDTQAAVSKTL*ERVGEA
Trigger: GGCCTCCCCAACCCTTTCTCACAGAGTTTTGGAAAC...GGCAGCCTGGGTGTCATGGAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR TCA 90 bp GAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATTGGCAGCAAAGAGCCCTCCTGAGGTaGGCTGGGAGAGCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: EGSSVVWLFGTGRDHWQQRALLR*AGRARH
Trigger: ATGCCTGGCTCTCCCAGCTCACCTCAGGAGGGCTCT...TTGCTGCCAATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR TCA 90 bp ATCCCCTCTGTCAAAAGTGAAGCATCGAAGGTTCGGACTGCAGGCCCAGGAGGCAGCCTGGGACTGGGGTaGGCAAGGAGAATCAGTACT +
Preference number: 4 (lower is better)
Translates to: IPSVKSEASKVRTAGPGGSLGLG*ARRIST
Trigger: AGTACTGATTCTCCTTGCTCACCCCAGTCCCAGGCT...GCCTCCTGGGCCTGCAGTCCGAACCTTCGATGCTTCACTTTTGACAGAGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR GCA 90 bp TTCCCAGTGGGAGATGGCTTCATTCACAAAATCCTTGGCACTCAGCTGCTCCAGGGCAGGGGATGGGGCTaGAGATTGGCCACCCTCAGA +
Preference number: 4 (lower is better)
Translates to: FPVGDGFIHKILGTQLLQGRGWG*RLATLR
Trigger: TCTGAGGGTGGCCAATCTGCAGCCCCATCCCCTGCC...CTGGAGCAGCTGAGTGCCAAGGATTTTGTGAATGAAGCCATCTCCCACTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
CDS-3UTR GCA 90 bp GGCAGCATCCATCAGGTAGTACTCCATGACACCCAGGCTGCCAGGTATGATCCCCCGAGAGTGCATCTCTaGCACTGGTCCCAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: GSIHQVVLHDTQAARYDPPRVHL*HWSQFP
Trigger: TGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGG...GGGATCATACCTGGCAGCCTGGGTGTCATGGAGTACTACCTGATGGATGCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495427.1
CDS-3UTR GCA 90 bp GGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGCTCTCTTGCCCAGGCTaGTCACTGCAGCCTCAAACT +
Preference number: 4 (lower is better)
Translates to: GDRTESASLPLVPVSSFWLSCPG*SLQPQT
Trigger: AGTTTGAGGCTGCAGTGAGCAGCCTGGGCAAGAGAG...CCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR GCA 90 bp GGAGTGGCGGTCTGTGGTACAGGGCACATCCACCAGCACCCGGTCATAGGTGTCTCTGACTTGGACTTCTaGTCAGATGATGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: GVAVCGTGHIHQHPVIGVSDLDF*SDDASC
Trigger: GCAAGAGGCATCATCTGAGCAGAAGTCCAAGTCAGA...GACACCTATGACCGGGTGCTGGTGGATGTGCCCTGTACCACAGACCGCCACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp AGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCCATGACACCCAGGCTGCCTTTGTTGAGGATTACTaGTCCGGCCCCAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: RQQGGSIHQVVLHDTQAAFVEDY*SGPSFC
Trigger: GCAGAAGCTGGGGCCGGAGCAGTAATCCTCAACAAA...GGCAGCCTGGGTGTCATGGAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp CAGTCGAACAGCAGGGAATTTGGGCTCTGTGGCAGCCTAGCGTCACACAGTGACCCTCGCTGGGACTCTTaGTCTGGCTCCTGCTATGTT +
Preference number: 4 (lower is better)
Translates to: QSNSREFGLCGSLASHSDPRWDS*SGSCYV
Trigger: AACATAGCAGGAGCCAGAGCAAGAGTCCCAGCGAGG...GTCACTGTGTGACGCTAGGCTGCCACAGAGCCCAAATTCCCTGCTGTTCGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp TGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGTGGGAGAGCCAGGCATaGCTGCCTGAGAAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: WRQDRECISATGPSFQFLWESQA*LPEKRV
Trigger: CACTCTCTTCTCAGGCAGGCATGCCTGGCTCTCCCA...CAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CCA 90 bp GAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGCATGGCCTCCTGGTTTaGTGGCAAGGAGTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: ESASLPLVPVSSFWCIQQHGLLV*WQGVQP
Trigger: CGGCTGGACTCCTTGCCACCAAACCAGGAGGCCATG...CTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp AAGGGAGTGGCGGTCTGTGGTACAGGGCACATCCACCAGCACCCGGTCATAGGTGGATGCTGTATTGATTaGCCAGGAGCTCAATGGCAC +
Preference number: 4 (lower is better)
Translates to: KGVAVCGTGHIHQHPVIGGCCID*PGAQWH
Trigger: GTGCCATTGAGCTCCTGGCCAATCAATACAGCATCC...ACCTATGACCGGGTGCTGGTGGATGTGCCCTGTACCACAGACCGCCACTCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp CACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTCTGGCTGGAGTGCAGTaGCACAAAACGGAGTCTCAC +
Preference number: 4 (lower is better)
Translates to: HEQDGDRTESASLPLVPVLAGVQ*HKTESH
Trigger: GTGAGACTCCGTTTTGTGCCACTGCACTCCAGCCAG...AACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CCA 90 bp CAGGCCGAGGGCCAGAACAGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCGAACAGCAGGGAATTTaGGCTCTGTGGCAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: QAEGQNRQQGGSIHQVVLEQQGI*ALWQPF
Trigger: AAAAGGCTGCCACAGAGCCCAAATTCCCTGCTGTTC...GAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCTGTTCTGGCCCTCGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469918.5
CDS-3UTR CCA 90 bp CGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCGAACAGCAGGGAATTTaGGCTCTGTGGCAGCCTAGC +
Preference number: 4 (lower is better)
Translates to: RTGWRQDRECISATGPSFEQQGI*ALWQPS
Trigger: GCTAGGCTGCCACAGAGCCCAAATTCCCTGCTGTTC...GAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp CTGGCTATTCGGGACGGGGAGAGATCATTGGCAGCAAGATTGCGGCAACAGCCATGGGGACTCTTGCTTTaGCTCCGGCTTTGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: LAIRDGERSLAARLRQQPWGLLL*LRLWLW
Trigger: CCAAAGCCAAAGCCGGAGCCAAAGCAAGAGTCCCCA...TGGCTGTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTCCCGAATAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp ATCCCCTCTGTCAAAAGTGAAGCATCGAAGGTTCGGACTGCAGGCCCAGGAGGCTGGGGACTCTTGCTTTaGCTCCGGCTTTGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: IPSVKSEASKVRTAGPGGWGLLL*LRLWLW
Trigger: CCAAAGCCAAAGCCGGAGCCAAAGCAAGAGTCCCCA...GCCTCCTGGGCCTGCAGTCCGAACCTTCGATGCTTCACTTTTGACAGAGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CCA 90 bp TCTCCTTCTAAGCCCCTAAGCGGGCAGCAAACTTTAGTACAGGCCTGGAGATGGCAATGCAAGCCTTCCTaGGAGCCTGGGACTGGGGTG +
Preference number: 4 (lower is better)
Translates to: SPSKPLSGQQTLVQAWRWQCKPS*EPGTGV
Trigger: CACCCCAGTCCCAGGCTCCCAGGAAGGCTTGCATTG...CCATCTCCAGGCCTGTACTAAAGTTTGCTGCCCGCTTAGGGGCTTAGAAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CCA 90 bp GAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAAGAGATGGTGGAGGTaGCGAGGGAATCGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: ESASLPLVPVSSFWCIQQKRWWR*RGNRLG
Trigger: CCCCAGCCGATTCCCTCGCCACCTCCACCATCTCTT...CTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537428.2
3UTR CAA 72 bp CTGGAGTGCAGTGGCACAAAACGGAGTCTCACTCTCTaGCCCAGGCTGCTCACTGCAGCCTCAAACTCCTGT +
Preference number: 4 (lower is better)
Translates to: LECSGTKRSLTL*PRLLTAASNSC
Trigger: ACAGGAGTTTGAGGCTGCAGTGAGCAGCCTGGGCAAGAGAGTGAGACTCCGTTTTGTGCCACTGCACTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR TCA 90 bp ACACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTCCCCTCTGTCAAAAGTaGAGCATCGAAGGTTCGGAC +
Preference number: 4 (lower is better)
Translates to: TRTGWRQDRECISATGPSPLCQK*SIEGSD
Trigger: GTCCGAACCTTCGATGCTTCACTTTTGACAGAGGGG...ACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp AGACAACATGGCCTCCTGGTTTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTGCACAGGAGGGAAGCGACTaGTATCCCCTCTGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: RQHGLLVWWQGVQPQEAAQEGSD*YPLCQK
Trigger: CTTTTGACAGAGGGGATATCAGTCGCTTCCCTCCTG...TGCAGCTTCTTGCGGCTGGACTCCTTGCCACCAAACCAGGAGGCCATGTTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307089.7
ENST00000498008.5
CDS-3UTR TCA 90 bp GGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGCAGGAGGGAAGCGACTaGTATCCCCTCTGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: GDRTESASLPLVPVSSFWQEGSD*YPLCQK
Trigger: CTTTTGACAGAGGGGATATCAGTCGCTTCCCTCCTG...CCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp ACACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTATTCCTGGGATCAAGTaGTCTTCCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: TRTGWRQDRECISATGPSIPGIK*SSHLGL
Trigger: GAGGCCAAGGTGGGAAGATCACTTGATCCCAGGAAT...ACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR TCA 90 bp AGAAAGACACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTTCAGGTAGTACTCCATaGCACCCAGGCTGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: RKTRTGWRQDRECISATGSGSTP*HPGCQV
Trigger: GACCTGGCAGCCTGGGTGTCATGGAGTACTACCTGA...ACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTGTCTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp GCAAGGAGTCCAGCCGCAAGAAGCTGCACTTGCAGCACAGGCAATATCTGTCGCCGGCAACAGCCAGTCTaGAGCAACGCTAGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: ARSPAARSCTCSTGNICRRQQPV*SNASVF
Trigger: AAAGACACTAGCGTTGCTTCAGACTGGCTGTTGCCG...GCGACAGATATTGCCTGTGCTGCAAGTGCAGCTTCTTGCGGCTGGACTCCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp CGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCGGAGAGTCCAGAGGATaGGAGGATTCGTTGCACCTT +
Preference number: 4 (lower is better)
Translates to: RTGWRQDRECISATGPSFGESRG*EDSLHL
Trigger: AAGGTGCAACGAATCCTCTCATCCTCTGGACTCTCC...GAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537428.2
CDS-3UTR TCA 90 bp AGACAACATGGCCTCCTGGTTTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTGCAGCTTCTGCGGGGAAGTaGCTGGGGTGGAGATATAAA +
Preference number: 4 (lower is better)
Translates to: RQHGLLVWWQGVQPQEAAASAGK*LGWRYK
Trigger: TTTATATCTCCACCCCAGTCACTTCCCCGCAGAAGC...TGCAGCTTCTTGCGGCTGGACTCCTTGCCACCAAACCAGGAGGCCATGTTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR TCA 90 bp GGAGGGAAGCGACTGATATCCCCTCTGTCAAAAGTGAAGCATCGAAGGTTCGGAGGCCTGTCGAATGATTaGGGGAGCCAGACAGTGGGC +
Preference number: 4 (lower is better)
Translates to: GGKRLISPLSKVKHRRFGGLSND*GSQTVG
Trigger: GCCCACTGTCTGGCTCCCTCAATCATTCGACAGGCC...TCCGAACCTTCGATGCTTCACTTTTGACAGAGGGGATATCAGTCGCTTCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR TCA 90 bp GTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTAGCTCTGTGGCAGCCTTaGAGACAGGGACGCCGCATT +
Preference number: 4 (lower is better)
Translates to: VHLCHWSQFPVSGASNRVALWQP*RQGRRI
Trigger: AATGCGGCGTCCCTGTCTTCAAGGCTGCCACAGAGC...TACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537428.2
CDS-3UTR GCA 90 bp CATAGCTGTGAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATGGCAGGGGATGGGGCTaGAGATTGGCCACCCTCAGA +
Preference number: 4 (lower is better)
Translates to: HSCEGSSVVWLFGTGRDHGRGWG*RLATLR
Trigger: TCTGAGGGTGGCCAATCTGCAGCCCCATCCCCTGCC...ATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTCACAGCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
CDS-3UTR GCA 90 bp CCATACTTCTGCTCTGAGAGGAGACTGACACGGATTGATGGCCAAAGATCTCCAATCGAAGGTTCGGACTaGAGGCCCAGGAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PYFCSERRLTRIDGQRSPIEGSD*RPRRQG
Trigger: CCCCTGCCTCCTGGGCCTGCAGTCCGAACCTTCGAT...TGGAGATCTTTGGCCATCAATCCGTGTCAGTCTCCTCTCAGAGCAGAAGTATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
CDS-3UTR GCA 90 bp CAGCACCCGGTCATAGGTGTCCCCCTCCAGTTCTCCCCATTTCCTGCCATCCCAGCAAGAAGCTGCACTTaGAGCACAGGCAATATCTGT +
Preference number: 4 (lower is better)
Translates to: QHPVIGVPLQFSPFPAIPARSCT*STGNIC
Trigger: ACAGATATTGCCTGTGCTGCAAGTGCAGCTTCTTGC...TGGGATGGCAGGAAATGGGGAGAACTGGAGGGGGACACCTATGACCGGGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp TGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGCCAGCCGCAAGAAGCTaGACTTGCAGCACAGGCAAT +
Preference number: 4 (lower is better)
Translates to: WRQDRECISATGPSFQFLPAARS*TCSTGN
Trigger: ATTGCCTGTGCTGCAAGTGCAGCTTCTTGCGGCTGG...CAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp AAGGGAGTGGCGGTCTGTGGTACAGGGCACATCCACCAGCACCCGGTCATAGGTAGCTCAATGGCACCTTaGACCACATACTCGTTCTGT +
Preference number: 4 (lower is better)
Translates to: KGVAVCGTGHIHQHPVIGSSMAP*TTYSFC
Trigger: ACAGAACGAGTATGTGGTGCAAGGTGCCATTGAGCT...ACCTATGACCGGGTGCTGGTGGATGTGCCCTGTACCACAGACCGCCACTCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp GGCCGAGGGCCAGAACAGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCCATCAGCCTACGCATTTTaGAGAAGTACATGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: GRGPEQAARRQHPSGSTPSAYAF*RSTWGQ
Trigger: TTGGCCCCATGTACTTCTGCAAAATGCGTAGGCTGA...TGGAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCTGTTCTGGCCCTCGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp TGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGCCGAGAGTGCATCTCTaGCACTGGTCCCAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: WRQDRECISATGPSFQFLPRVHL*HWSQFP
Trigger: TGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGG...CAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp GCAGAAGTACATGGGGCCAAAATTGGCCATGAGGTTTGGTATTACCAGCTCCCCGCCCAGGCTGCTCACTaGAGCCTCAAACTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: AEVHGAKIGHEVWYYQLPAQAAH*SLKLLC
Trigger: GCACAGGAGTTTGAGGCTGCAGTGAGCAGCCTGGGC...GGGGAGCTGGTAATACCAAACCTCATGGCCAATTTTGGCCCCATGTACTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR GCA 90 bp AGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCCATGACACCCAGGCTGCCTTTGGTGGGAACTCCTaGTCTCGCTGTCACTACTCT +
Preference number: 4 (lower is better)
Translates to: RQQGGSIHQVVLHDTQAAFGGNS*SRCHYS
Trigger: AGAGTAGTGACAGCGAGAGCAGGAGTTCCCACCAAA...GGCAGCCTGGGTGTCATGGAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp CACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTGCCATCATAGACTCTTaGTCTTGCCCTGACCTCTGC +
Preference number: 4 (lower is better)
Translates to: HEQDGDRTESASLPLVPVAIIDS*SCPDLC
Trigger: GCAGAGGTCAGGGCAAGAGCAAGAGTCTATGATGGC...AACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp CAGCACCCGGTCATAGGTGTCCCCCTCCAGTTCTCCCCATTTCCTGCCATCCCACATTCACAAAATCCTTaGCACTCAGCTGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: QHPVIGVPLQFSPFPAIPHSQNP*HSAAPA
Trigger: AGCTGGAGCAGCTGAGTGCCAAGGATTTTGTGAATG...TGGGATGGCAGGAAATGGGGAGAACTGGAGGGGGACACCTATGACCGGGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000486270.5
ENST00000498008.5
CDS-3UTR CCA 90 bp CACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTGGATCTTCTGTAGTCTaGCTATTCGGGACGGGGAGA +
Preference number: 4 (lower is better)
Translates to: HEQDGDRTESASLPLVPVGSSVV*LFGTGR
Trigger: TCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCC...AACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp CTTCCACCTGTACCTGGATGCTGTATTGATTGGCCAGGAGCTCAATGGCACCTTGGGAGTGGCGGTCTGTaGTACAGGGCACATCCACCA +
Preference number: 4 (lower is better)
Translates to: LPPVPGCCIDWPGAQWHLGSGGL*YRAHPP
Trigger: TGGTGGATGTGCCCTGTACCACAGACCGCCACTCCC...AAGGTGCCATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTACAGGTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp TGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGACAACATGGCCTCCTaGTTTGGTGGCAAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: WRQDRECISATGPSFQFLDNMAS*FGGKES
Trigger: GGACTCCTTGCCACCAAACCAGGAGGCCATGTTGTC...CAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp ACACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTGGCCAGGAGCTCAATaGCACCTTGCACCACATACT +
Preference number: 4 (lower is better)
Translates to: TRTGWRQDRECISATGPSWPGAQ*HLAPHT
Trigger: AGTATGTGGTGCAAGGTGCCATTGAGCTCCTGGCCA...ACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp CGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCGCAATGGCGCTATCTTaGCTCACTGAAACCTCCACC +
Preference number: 4 (lower is better)
Translates to: RTGWRQDRECISATGPSFAMALS*LTETST
Trigger: GGTGGAGGTTTCAGTGAGCCAAGATAGCGCCATTGC...GAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CCA 90 bp TCGGGACGGGGAGAGATCATTGGCAGCAAGATTGCGGCAACAGCCAGTCTGAAGACGGGGAGAGATCATTaGCAGCAAGATTGCGGCAAC +
Preference number: 4 (lower is better)
Translates to: SGRGEIIGSKIAATASLKTGRDH*QQDCGN
Trigger: GTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGT...CTTCAGACTGGCTGTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp AGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGGGAATTTGGGCTCTGTaGCAGCCTAGCGTCACACAG +
Preference number: 4 (lower is better)
Translates to: RQDRECISATGPSFQFLVGIWAL*QPSVTQ
Trigger: CTGTGTGACGCTAGGCTGCCACAGAGCCCAAATTCC...CACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp AGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCCATGACACCCAGGCTGCCGAACAGCAGGGAATTTaGGCTCTGTGGCAGCCTAAA +
Preference number: 4 (lower is better)
Translates to: RQQGGSIHQVVLHDTQAAEQQGI*ALWQPK
Trigger: TTTAGGCTGCCACAGAGCCCAAATTCCCTGCTGTTC...GGCAGCCTGGGTGTCATGGAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486270.5
CDS-3UTR CCA 90 bp GGCCGAGGGCCAGAACAGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCCAAACTACAGCTGGGATTaGTGCTACAGCTGGAATCCT +
Preference number: 4 (lower is better)
Translates to: GRGPEQAARRQHPSGSTPNYSWD*CYSWNP
Trigger: AGGATTCCAGCTGTAGCACCAATCCCAGCTGTAGTT...TGGAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCTGTTCTGGCCCTCGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp AGACAACATGGCCTCCTGGTTTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTGCAGGTGGAGATATAAACTaGTTGCCCAGGGGTGAAGGG +
Preference number: 4 (lower is better)
Translates to: RQHGLLVWWQGVQPQEAAGGDIN*LPRGEG
Trigger: CCCTTCACCCCTGGGCAACCAGTTTATATCTCCACC...TGCAGCTTCTTGCGGCTGGACTCCTTGCCACCAAACCAGGAGGCCATGTTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CCA 90 bp CGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACACCAGAAGGGGTGTGCTaGGGAGTGTTGACTAGGGAG +
Preference number: 4 (lower is better)
Translates to: RECISATGPSFQFLVHPTPEGVC*GVLTRE
Trigger: CTCCCTAGTCAACACTCCCCAGCACACCCCTTCTGG...TGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CCA 90 bp ATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGTGCGAGGAAGGTTGTaGGGGTGGAAGAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: METGPRVHLCHWSQFPVSVRGRL*GWKRWW
Trigger: CCACCATCTCTTCCACCCCCACAACCTTCCTCGCAC...AGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537428.2
CDS-3UTR TCA 90 bp AAGGGAGTGGCGGTCTGTGGTACAGGGCACATCCACCAGCACCCGGTCATAGGTAGGCAGCAAAGTTATTaGCCAGTGCACCATACTTCT +
Preference number: 4 (lower is better)
Translates to: KGVAVCGTGHIHQHPVIGRQQSY*PVHHTS
Trigger: AGAAGTATGGTGCACTGGTCAATAACTTTGCTGCCT...ACCTATGACCGGGTGCTGGTGGATGTGCCCTGTACCACAGACCGCCACTCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp CAGGCCGAGGGCCAGAACAGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCAGGCAGCAAAGTTATTaGCCAGTGCACCATACTTCT +
Preference number: 4 (lower is better)
Translates to: QAEGQNRQQGGSIHQVVLRQQSY*PVHHTS
Trigger: AGAAGTATGGTGCACTGGTCAATAACTTTGCTGCCT...GAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCTGTTCTGGCCCTCGGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp CAGCACCCGGTCATAGGTGTCCCCCTCCAGTTCTCCCCATTTCCTGCCATCCCAAGCTTAGCACTTACATaGTCCCAGGCAGCAAAGTTA +
Preference number: 4 (lower is better)
Translates to: QHPVIGVPLQFSPFPAIPSLALT*SQAAKL
Trigger: TAACTTTGCTGCCTGGGATCATGTAAGTGCTAAGCT...TGGGATGGCAGGAAATGGGGAGAACTGGAGGGGGACACCTATGACCGGGTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000486270.5
ENST00000498008.5
CDS-3UTR TCA 90 bp GGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGACCAGCTCCCCAACCTaGCAGGATGAGAAGAAACAA +
Preference number: 4 (lower is better)
Translates to: GDRTESASLPLVPVSSFWTSSPT*QDEKKQ
Trigger: TTGTTTCTTCTCATCCTGTCAGGTTGGGGAGCTGGT...CCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp TTCCCAGTGGGAGATGGCTTCATTCACAAAATCCTTGGCACTCAGCTGCTCCAGTCAGGTAGTACTCCATaGCACCCAGGCTGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: FPVGDGFIHKILGTQLLQSGSTP*HPGCQV
Trigger: GACCTGGCAGCCTGGGTGTCATGGAGTACTACCTGA...CTGGAGCAGCTGAGTGCCAAGGATTTTGTGAATGAAGCCATCTCCCACTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
CDS-3UTR TCA 90 bp TCTCCTTCTAAGCCCCTAAGCGGGCAGCAAACTTTAGTACAGGCCTGGAGATGGGGACTTCTGCTCAGATaGTGCCTCTTGCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SPSKPLSGQQTLVQAWRWGLLLR*CLLLQL
Trigger: GAGCTGGAGCAAGAGGCATCATCTGAGCAGAAGTCC...CCATCTCCAGGCCTGTACTAAAGTTTGCTGCCCGCTTAGGGGCTTAGAAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp ACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCAGCTGGTTCCAAAAGCTaGAGGCCATCCGCTAGAGTA +
Preference number: 4 (lower is better)
Translates to: TGPRVHLCHWSQFPVSGAAGSKS*RPSARV
Trigger: TACTCTAGCGGATGGCCTTCAGCTTTTGGAACCAGC...TGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR TCA 90 bp AATAGACAACATGGCCTCCTGGTTTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTCTCCCTGAGAACCAGTaGGAGGGCAGAGAGATCATC +
Preference number: 4 (lower is better)
Translates to: NRQHGLLVWWQGVQPQEALPENQ*EGREII
Trigger: GATGATCTCTCTGCCCTCTCACTGGTTCTCAGGGAG...AGCTTCTTGCGGCTGGACTCCTTGCCACCAAACCAGGAGGCCATGTTGTCTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR GCA 90 bp TTCCCAGTGGGAGATGGCTTCATTCACAAAATCCTTGGCACTCAGCTGCTCCAGTGGCCACCCTCAGACTaGAGTTCCCAGTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: FPVGDGFIHKILGTQLLQWPPSD*SSQWEM
Trigger: CATCTCCCACTGGGAACTGCAGTCTGAGGGTGGCCA...CTGGAGCAGCTGAGTGCCAAGGATTTTGTGAATGAAGCCATCTCCCACTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
CDS-3UTR GCA 90 bp CGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACACCAGCCGCAAGAAGCTaGACTTGCAGCACAGGCAAT +
Preference number: 4 (lower is better)
Translates to: RECISATGPSFQFLVHPTPAARS*TCSTGN
Trigger: ATTGCCTGTGCTGCAAGTGCAGCTTCTTGCGGCTGG...TGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp AGACAACATGGCCTCCTGGTTTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTGCACCACCTGTACCTGGATaGTGTATTGATTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: RQHGLLVWWQGVQPQEAAPPVPG*CIDWPG
Trigger: TCCTGGCCAATCAATACAGCATCCAGGTACAGGTGG...TGCAGCTTCTTGCGGCTGGACTCCTTGCCACCAAACCAGGAGGCCATGTTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp GGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGCCACCTGTACCTGGATaGTGTATTGATTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GDRTESASLPLVPVSSFWPPVPG*CIDWPG
Trigger: TCCTGGCCAATCAATACAGCATCCAGGTACAGGTGG...CCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp AGTGCACCATACTTCTGCTCTGAGAGGAGACTGACACGGATTGATGGCCAAAGAGCGGAGACCCAGGAGTaGAGGCAAGGTCGCTATGGT +
Preference number: 4 (lower is better)
Translates to: SAPYFCSERRLTRIDGQRAETQE*RQGRYG
Trigger: ACCATAGCGACCTTGCCTGCACTCCTGGGTCTCCGC...TCTTTGGCCATCAATCCGTGTCAGTCTCCTCTCAGAGCAGAAGTATGGTGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469918.5
CDS-3UTR GCA 90 bp GATTGGCCAGGAGCTCAATGGCACCTTGCACCACATACTCGTTCTGTAAGTGTGCAAGTCGGTCCTGGTTaGTGCAGCTGGGATGCTTGC +
Preference number: 4 (lower is better)
Translates to: DWPGAQWHLAPHTRSVSVQVGPG*CSWDAC
Trigger: GCAAGCATCCCAGCTGCAGCAACCAGGACCGACTTG...CACACTTACAGAACGAGTATGTGGTGCAAGGTGCCATTGAGCTCCTGGCCAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp CCCAGGCTGCCAGGTCTGGCAGGAGGGAAGCGACTGATATCCCCTCTGTCAAAAGGACTCTCACCCTGGTaGTCATTTATGCTAAGTTGG +
Preference number: 4 (lower is better)
Translates to: PRLPGLAGGKRLISPLSKGLSPW*SFMLSW
Trigger: CCAACTTAGCATAAATGAGCACCAGGGTGAGAGTCC...TTTTGACAGAGGGGATATCAGTCGCTTCCCTCCTGCCAGACCTGGCAGCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR GCA 90 bp ATATCCCCTCTGTCAAAAGTGAAGCATCGAAGGTTCGGACTGCAGGCCCAGGAGAGAGCCAGGCATGCCTaGCTGAGAAGAGAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: ISPLSKVKHRRFGLQAQERARHA*LRREWE
Trigger: TTCCCACTCTCTTCTCAGGCAGGCATGCCTGGCTCT...CTCCTGGGCCTGCAGTCCGAACCTTCGATGCTTCACTTTTGACAGAGGGGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CCA 90 bp AAGGGAGTGGCGGTCTGTGGTACAGGGCACATCCACCAGCACCCGGTCATAGGTGTTCCCAGTGGGAGATaGCTTCATTCACAAAATCCT +
Preference number: 4 (lower is better)
Translates to: KGVAVCGTGHIHQHPVIGVPSGR*LHSQNP
Trigger: AGGATTTTGTGAATGAAGCCATCTCCCACTGGGAAC...ACCTATGACCGGGTGCTGGTGGATGTGCCCTGTACCACAGACCGCCACTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000486270.5
ENST00000498008.5
CDS-3UTR CCA 90 bp GGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTGGATCTTCTGTAGTCTaGCTATTCGGGACGGGGAGA +
Preference number: 4 (lower is better)
Translates to: GWRQDRECISATGPSFQFGSSVV*LFGTGR
Trigger: TCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCC...AAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp TCTCCTTCTAAGCCCCTAAGCGGGCAGCAAACTTTAGTACAGGCCTGGAGATGGGACAACATGGCCTCCTaGTTTGGTGGCAAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: SPSKPLSGQQTLVQAWRWDNMAS*FGGKES
Trigger: GGACTCCTTGCCACCAAACCAGGAGGCCATGTTGTC...CCATCTCCAGGCCTGTACTAAAGTTTGCTGCCCGCTTAGGGGCTTAGAAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp CAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTGGATGCTGTATTGATTaGCCAGGAGCTCAATGGCAC +
Preference number: 4 (lower is better)
Translates to: QDGDRTESASLPLVPVSSGCCID*PGAQWH
Trigger: GTGCCATTGAGCTCCTGGCCAATCAATACAGCATCC...ACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp ACACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTGTGCATCTCTGCCACTaGTCCCAGTTTCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: TRTGWRQDRECISATGPSVHLCH*SQFPVS
Trigger: AGAAACTGGAAACTGGGACCAGTGGCAGAGATGCAC...ACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp GGAGTGGCGGTCTGTGGTACAGGGCACATCCACCAGCACCCGGTCATAGGTGTCGCTTTTATGTTGCTCTaGCCATGTAATCAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: GVAVCGTGHIHQHPVIGVAFMLL*PCNQAR
Trigger: TCTGGCTTGATTACATGGCCAGAGCAACATAAAAGC...GACACCTATGACCGGGTGCTGGTGGATGTGCCCTGTACCACAGACCGCCACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CCA 90 bp ACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCACAGGCAAGGTCGCTATaGTATTTTCCGAGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: TGPRVHLCHWSQFPVSGAQARSL*YFPRGE
Trigger: CTCACCCCTCGGAAAATACCATAGCGACCTTGCCTG...TGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537428.2
CDS-3UTR CCA 90 bp GAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATTGGCAGCAACCTTTTGCCAGGGTTTaGGCCGGCAGTATGGACAGG +
Preference number: 4 (lower is better)
Translates to: EGSSVVWLFGTGRDHWQQPFARV*AGSMDR
Trigger: CCTGTCCATACTGCCGGCCCAAACCCTGGCAAAAGG...TTGCTGCCAATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469918.5
CDS-3UTR CCA 90 bp CTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTGCACAAGTCGGTCCTaGTTGCTGCAGCTGGGATGC +
Preference number: 4 (lower is better)
Translates to: LCHWSQFPVSGASNRVYPCTSRS*LLQLGC
Trigger: GCATCCCAGCTGCAGCAACCAGGACCGACTTGTGCA...AGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp AGAAAGACACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCTTTGGCTCCGGCTTTaGCTTTGGTGGGAACTCCTG +
Preference number: 4 (lower is better)
Translates to: RKTRTGWRQDRECISATGLWLRL*LWWELL
Trigger: CAGGAGTTCCCACCAAAGCCAAAGCCGGAGCCAAAG...ACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTGTCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp ATCAGAGGTTTGAGGGTCATGCTGGGAGAGTTCCCAGACCCCAGAAAGGTTGGACTTTGGCTCCGGCTTTaGCTTTGGTGGGAACTCCTG +
Preference number: 4 (lower is better)
Translates to: IRGLRVMLGEFPDPRKVGLWLRL*LWWELL
Trigger: CAGGAGTTCCCACCAAAGCCAAAGCCGGAGCCAAAG...TCCAACCTTTCTGGGGTCTGGGAACTCTCCCAGCATGACCCTCAAACCTCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp AGACAACATGGCCTCCTGGTTTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTGCAGAGGAGGCGAAATCATaGGTCCAGTTTCCAAGGGTA +
Preference number: 4 (lower is better)
Translates to: RQHGLLVWWQGVQPQEAAEEAKS*VQFPRV
Trigger: TACCCTTGGAAACTGGACCCATGATTTCGCCTCCTC...TGCAGCTTCTTGCGGCTGGACTCCTTGCCACCAAACCAGGAGGCCATGTTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CCA 90 bp CACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCTGTGAGAAAGGGTTaGGGAGGCCATAGGACTAGT +
Preference number: 4 (lower is better)
Translates to: HEQDGDRTESASLPLVPVSVRKG*GGHRTS
Trigger: ACTAGTCCTATGGCCTCCCCAACCCTTTCTCACAGA...AACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CCA 90 bp GAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATTGGCAGCAAACAACGAGGTTGGGGTaGGCCCCTGGGAGTGCTATA +
Preference number: 4 (lower is better)
Translates to: EGSSVVWLFGTGRDHWQQTTRLG*APGSAI
Trigger: TATAGCACTCCCAGGGGCCCACCCCAACCTCGTTGT...TTGCTGCCAATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR TCA 90 bp TCGGGACGGGGAGAGATCATTGGCAGCAAGATTGCGGCAACAGCCAGTCTGAAGGAGACTGACACGGATTaGTGGCCAAAGATCTCCAAA +
Preference number: 4 (lower is better)
Translates to: SGRGEIIGSKIAATASLKETDTD*WPKISK
Trigger: TTTGGAGATCTTTGGCCATCAATCCGTGTCAGTCTC...CTTCAGACTGGCTGTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp GAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGCCCCTCTGTCAAAAGTaGAGCATCGAAGGTTCGGAC +
Preference number: 4 (lower is better)
Translates to: ESASLPLVPVSSFWCIQQPLCQK*SIEGSD
Trigger: GTCCGAACCTTCGATGCTTCACTTTTGACAGAGGGG...CTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp ATATCCCCTCTGTCAAAAGTGAAGCATCGAAGGTTCGGACTGCAGGCCCAGGAGCAGGAGGGAAGCGACTaGTATCCCCTCTGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: ISPLSKVKHRRFGLQAQEQEGSD*YPLCQK
Trigger: CTTTTGACAGAGGGGATATCAGTCGCTTCCCTCCTG...CTCCTGGGCCTGCAGTCCGAACCTTCGATGCTTCACTTTTGACAGAGGGGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
CDS-3UTR TCA 90 bp AGACAACATGGCCTCCTGGTTTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTGCACTTGATTTCCATCCCTaGTCTCTTCAGGCACATAGC +
Preference number: 4 (lower is better)
Translates to: RQHGLLVWWQGVQPQEAALDFHP*SLQAHS
Trigger: GCTATGTGCCTGAAGAGATCAGGGATGGAAATCAAG...TGCAGCTTCTTGCGGCTGGACTCCTTGCCACCAAACCAGGAGGCCATGTTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp TCATGCTGGGAGAGTTCCCAGACCCCAGAAAGGTTGGATAAGGAGGGCCCACAGCTTGATTTCCATCCCTaGTCTCTTCAGGCACATAGC +
Preference number: 4 (lower is better)
Translates to: SCWESSQTPERLDKEGPQLDFHP*SLQAHS
Trigger: GCTATGTGCCTGAAGAGATCAGGGATGGAAATCAAG...CTGTGGGCCCTCCTTATCCAACCTTTCTGGGGTCTGGGAACTCTCCCAGCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp GATCTTCCACCTGTACCTGGATGCTGTATTGATTGGCCAGGAGCTCAATGGCACTTGTTCTCCTCCTCATaGAGGGAGTGGCGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: DLPPVPGCCIDWPGAQWHLFSSS*REWRSV
Trigger: CACAGACCGCCACTCCCTTCATGAGGAGGAGAACAA...GTGCCATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTACAGGTGGAAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp AGCTGTGAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATTGGTTGTTCTCCTCCTCATaGAGGGAGTGGCGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: SCEGSSVVWLFGTGRDHWLFSSS*REWRSV
Trigger: CACAGACCGCCACTCCCTTCATGAGGAGGAGAACAA...CCAATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTCACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp AGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGACCTGGATGCTGTATTaGTTGGCCAGGAGCTCAATG +
Preference number: 4 (lower is better)
Translates to: RQDRECISATGPSFQFLVTWMLY*LARSSM
Trigger: CATTGAGCTCCTGGCCAATCAATACAGCATCCAGGT...CACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp TCATGCTGGGAGAGTTCCCAGACCCCAGAAAGGTTGGATAAGGAGGGCCCACAGAAAACCCTTCGGAAGTaGGTCAGATCTTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: SCWESSQTPERLDKEGPQKTLRK*VRSSTC
Trigger: ACAGGTGGAAGATCTGACTCACTTCCGAAGGGTTTT...CTGTGGGCCCTCCTTATCCAACCTTTCTGGGGTCTGGGAACTCTCCCAGCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp GGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGAAAACCCTTCGGAAGTaGGTCAGATCTTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: GDRTESASLPLVPVSSFWKTLRK*VRSSTC
Trigger: ACAGGTGGAAGATCTGACTCACTTCCGAAGGGTTTT...CCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp CAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTGTAGGGGTTAATGAGTaGGTTGGAAACCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: QDGDRTESASLPLVPVSSVGVNE*VGNLLM
Trigger: CATCAGCAGGTTTCCAACTCACTCATTAACCCCTAC...ACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp CGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGCACGCACAAGAGTATaGCGGTTTTGTGGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: RECISATGPSFQFLVHPTARTRV*RFCGRS
Trigger: GCTTCTGCCACAAAACCGTCATACTCTTGTGCGTGC...TGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR TCA 90 bp CAGCACCCGGTCATAGGTGTCCCCCTCCAGTTCTCCCCATTTCCTGCCATCCCAACTTATTTATCGAAATaGAGTCTCTTGCTGTCGCCC +
Preference number: 4 (lower is better)
Translates to: QHPVIGVPLQFSPFPAIPTYLSK*SLLLSP
Trigger: GGGCGACAGCAAGAGACTTCATTTCGATAAATAAGT...TGGGATGGCAGGAAATGGGGAGAACTGGAGGGGGACACCTATGACCGGGTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR TCA 90 bp TGTGAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATTGGCAGCCAGGCTGCCAGGTATaGTCCCAGGCAGCAAAGTTA +
Preference number: 4 (lower is better)
Translates to: CEGSSVVWLFGTGRDHWQPGCQV*SQAAKL
Trigger: TAACTTTGCTGCCTGGGATCATACCTGGCAGCCTGG...CTGCCAATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495427.1
CDS-3UTR TCA 90 bp TCTCCTTCTAAGCCCCTAAGCGGGCAGCAAACTTTAGTACAGGCCTGGAGATGGGTGACCCCGGAATGCTaGACTGCTCAAAATAAGGGC +
Preference number: 4 (lower is better)
Translates to: SPSKPLSGQQTLVQAWRWVTPEC*TAQNKG
Trigger: GCCCTTATTTTGAGCAGTTCAGCATTCCGGGGTCAC...CCATCTCCAGGCCTGTACTAAAGTTTGCTGCCCGCTTAGGGGCTTAGAAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537428.2
CDS-3UTR GCA 90 bp AGCACTTACATGATCCCAGGCAGCAAAGTTATTGACCAGTGCACCATACTTCTGATCGAAGGTTCGGACTaGAGGCCCAGGAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: STYMIPGSKVIDQCTILLIEGSD*RPRRQG
Trigger: CCCCTGCCTCCTGGGCCTGCAGTCCGAACCTTCGAT...CAGAAGTATGGTGCACTGGTCAATAACTTTGCTGCCTGGGATCATGTAAGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
CDS-3UTR GCA 90 bp GACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCAGCTCAATGGCACCTTaGACCACATACTCGTTCTGT +
Preference number: 4 (lower is better)
Translates to: DRTESASLPLVPVSSFWCSSMAP*TTYSFC
Trigger: ACAGAACGAGTATGTGGTGCAAGGTGCCATTGAGCT...GCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp GGCAGCATCCATCAGGTAGTACTCCATGACACCCAGGCTGCCAGGTATGATCCCAGCTCAATGGCACCTTaGACCACATACTCGTTCTGT +
Preference number: 4 (lower is better)
Translates to: GSIHQVVLHDTQAARYDPSSMAP*TTYSFC
Trigger: ACAGAACGAGTATGTGGTGCAAGGTGCCATTGAGCT...GGGATCATACCTGGCAGCCTGGGTGTCATGGAGTACTACCTGATGGATGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495427.1
CDS-3UTR GCA 90 bp CACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCAGCCTACGCATTTTaGAGAAGTACATGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: HEQDGDRTESASLPLVPVSAYAF*RSTWGQ
Trigger: TTGGCCCCATGTACTTCTGCAAAATGCGTAGGCTGA...AACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp TGTTGTTCTCCTCCTCATGAAGGGAGTGGCGGTCTGTGGTACAGGGCACATCCACATTGGCAGCAAGATTaGGGCAACAGCCAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: CCSPPHEGSGGLWYRAHPHWQQD*GNSQSE
Trigger: TTCAGACTGGCTGTTGCCGCAATCTTGCTGCCAATG...TGGATGTGCCCTGTACCACAGACCGCCACTCCCTTCATGAGGAGGAGAACAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp ACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCAACTTCAGATGAGGAGTaGACAAGTCGGTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: TGPRVHLCHWSQFPVSGATSDEE*TSRSWL
Trigger: CAACCAGGACCGACTTGTGCACTCCTCATCTGAAGT...TGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp TCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCATTCGTTGCACCTTTTaGCAGGGTTTGGGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: SLPLVPVSSFWCIQQSIPIRCTF*QGLGRQ
Trigger: CTGCCGGCCCAAACCCTGGCAAAAGGTGCAACGAAT...GGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537428.2
CDS-3UTR GCA 90 bp CTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTCATCATGGGGACTCTTaGTTTGGCTCCGGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: LCHWSQFPVSGASNRVYPHHGDS*FGSGFG
Trigger: GCCAAAGCCGGAGCCAAAGCAAGAGTCCCCATGATG...AGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp TATTCGGGACGGGGAGAGATCATTGGCAGCAAGATTGCGGCAACAGCCAGTCTGTCAGATGATGCCTCTTaGTCCAGCTCTGACTTCTGC +
Preference number: 4 (lower is better)
Translates to: YSGRGEIIGSKIAATASLSDDAS*SSSDFC
Trigger: GCAGAAGTCAGAGCTGGAGCAAGAGGCATCATCTGA...CAGACTGGCTGTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTCCCGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp CAGTCGAACAGCAGGGAATTTGGGCTCTGTGGCAGCCTAGCGTCACACAGTGACTGCAGCTGGGATGCTTaGTATAGCTGGCAATCTTGT +
Preference number: 4 (lower is better)
Translates to: QSNSREFGLCGSLASHSDCSWDA*YSWQSC
Trigger: ACAAGATTGCCAGCTATAGCAAGCATCCCAGCTGCA...GTCACTGTGTGACGCTAGGCTGCCACAGAGCCCAAATTCCCTGCTGTTCGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp AATAGACAACATGGCCTCCTGGTTTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTAGAGAAGGGACTCAATaGAAGCCTTCCTGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: NRQHGLLVWWQGVQPQEAREGTQ*KPSWEP
Trigger: AGGCTCCCAGGAAGGCTTGCATTGAGTCCCTTCTCT...AGCTTCTTGCGGCTGGACTCCTTGCCACCAAACCAGGAGGCCATGTTGTCTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR GCA 90 bp GCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATAGACCATCTCCCTGAGTaGGAGGAAGGTTGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: ASLPLVPVSSFWCIQQSIDHLPE*EEGCGG
Trigger: ACCCCCACAACCTTCCTCGCACTCAGGGAGATGGTC...TATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537428.2
CDS-3UTR GCA 90 bp GAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGGGACTCATCCAGCTaGAATAAGGTGTCCGCTGAC +
Preference number: 4 (lower is better)
Translates to: ESASLPLVPVSSFWCIQQRDSSS*NKVSAD
Trigger: GTCAGCGGACACCTTATTGCAGCTGGATGAGTCCCT...CTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537428.2
CDS-3UTR CCA 90 bp AATAGACAACATGGCCTCCTGGTTTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTGAACAGCAGGGAATTTaGGCTCTGTGGCAGCCCATT +
Preference number: 4 (lower is better)
Translates to: NRQHGLLVWWQGVQPQEAEQQGI*ALWQPI
Trigger: AATGGGCTGCCACAGAGCCCAAATTCCCTGCTGTTC...AGCTTCTTGCGGCTGGACTCCTTGCCACCAAACCAGGAGGCCATGTTGTCTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CCA 90 bp ACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAAGGATCTTCTGTAGTCTaGCTATTCGGGACGGGGAGA +
Preference number: 4 (lower is better)
Translates to: TESASLPLVPVSSFWCIQGSSVV*LFGTGR
Trigger: TCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCC...TTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp ATATCCCCTCTGTCAAAAGTGAAGCATCGAAGGTTCGGACTGCAGGCCCAGGAGGGATCTTCTGTAGTCTaGCTATTCGGGACGGGGAGA +
Preference number: 4 (lower is better)
Translates to: ISPLSKVKHRRFGLQAQEGSSVV*LFGTGR
Trigger: TCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCC...CTCCTGGGCCTGCAGTCCGAACCTTCGATGCTTCACTTTTGACAGAGGGGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
CDS-3UTR CCA 90 bp CCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTAGGGAGTGGCGGTCTGTaGTACAGGGCACATCCACCA +
Preference number: 4 (lower is better)
Translates to: PLVPVSSFWCIQQSIPFVGSGGL*YRAHPP
Trigger: TGGTGGATGTGCCCTGTACCACAGACCGCCACTCCC...TACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp GATTGGCCAGGAGCTCAATGGCACCTTGCACCACATACTCGTTCTGTAAGTGTGGACAACATGGCCTCCTaGTTTGGTGGCAAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: DWPGAQWHLAPHTRSVSVDNMAS*FGGKES
Trigger: GGACTCCTTGCCACCAAACCAGGAGGCCATGTTGTC...CACACTTACAGAACGAGTATGTGGTGCAAGGTGCCATTGAGCTCCTGGCCAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp GAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGTGGCCAGGAGCTCAATaGCACCTTGCACCACATACT +
Preference number: 4 (lower is better)
Translates to: ESASLPLVPVSSFWCIQQWPGAQ*HLAPHT
Trigger: AGTATGTGGTGCAAGGTGCCATTGAGCTCCTGGCCA...CTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp GGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTGGATGCTGTATTGATTaGCCAGGAGCTCAATGGCAC +
Preference number: 4 (lower is better)
Translates to: GWRQDRECISATGPSFQFGCCID*PGAQWH
Trigger: GTGCCATTGAGCTCCTGGCCAATCAATACAGCATCC...AAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp CAGTCGAACAGCAGGGAATTTGGGCTCTGTGGCAGCCTAGCGTCACACAGTGACATTGGCCATGAGGTTTaGTATTACCAGCTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: QSNSREFGLCGSLASHSDIGHEV*YYQLPN
Trigger: GTTGGGGAGCTGGTAATACCAAACCTCATGGCCAAT...GTCACTGTGTGACGCTAGGCTGCCACAGAGCCCAAATTCCCTGCTGTTCGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp GACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATTGGCCATGAGGTTTaGTATTACCAGCTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: DRTESASLPLVPVSSFWCIGHEV*YYQLPN
Trigger: GTTGGGGAGCTGGTAATACCAAACCTCATGGCCAAT...GCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp ACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCAGTGCATCTCTGCCACTaGTCCCAGTTTCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: TGPRVHLCHWSQFPVSGAVHLCH*SQFPVS
Trigger: AGAAACTGGAAACTGGGACCAGTGGCAGAGATGCAC...TGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp TGTTGTTCTCCTCCTCATGAAGGGAGTGGCGGTCTGTGGTACAGGGCACATCCAGTGCATCTCTGCCACTaGTCCCAGTTTCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: CCSPPHEGSGGLWYRAHPVHLCH*SQFPVS
Trigger: AGAAACTGGAAACTGGGACCAGTGGCAGAGATGCAC...TGGATGTGCCCTGTACCACAGACCGCCACTCCCTTCATGAGGAGGAGAACAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp ATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTAAGACACGAACAGGATaGAGACAGGACCGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: METGPRVHLCHWSQFPVSKTRTG*RQDREC
Trigger: GCACTCTCGGTCCTGTCTCCATCCTGTTCGTGTCTT...AGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp TCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTGTGAGCCTGCTCACTaGCTTCTCCTTCTAAGCCCC +
Preference number: 4 (lower is better)
Translates to: SLPLVPVSSFWCIQQSIPCEPAH*LLLLSP
Trigger: GGGGCTTAGAAGGAGAAGCCAGTGAGCAGGCTCACA...GGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp GCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCTTTTGCCAGGGTTTaGGCCGGCAGTATGGACAGG +
Preference number: 4 (lower is better)
Translates to: ASLPLVPVSSFWCIQQSIPFARV*AGSMDR
Trigger: CCTGTCCATACTGCCGGCCCAAACCCTGGCAAAAGG...TATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537428.2
CDS-3UTR CCA 90 bp GAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGACGGGGAGAGATCATTaGCAGCAAGATTGCGGCAAC +
Preference number: 4 (lower is better)
Translates to: ESASLPLVPVSSFWCIQQTGRDH*QQDCGN
Trigger: GTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGT...CTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp TCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCGAACAGCAGGGAATTTaGGCTCTGTGGCAGCCTAGC +
Preference number: 4 (lower is better)
Translates to: SLPLVPVSSFWCIQQSIPEQQGI*ALWQPS
Trigger: GCTAGGCTGCCACAGAGCCCAAATTCCCTGCTGTTC...GGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp AGACAACATGGCCTCCTGGTTTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTGCATCATTTATGCTAAGTTaGGGACTCTCACTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: RQHGLLVWWQGVQPQEAASFMLS*GLSLWP
Trigger: GGGCCAGAGTGAGAGTCCCCAACTTAGCATAAATGA...TGCAGCTTCTTGCGGCTGGACTCCTTGCCACCAAACCAGGAGGCCATGTTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp CGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCTGGGGACTCTCACCCTaGTGCTCATTTATGCTAAGT +
Preference number: 4 (lower is better)
Translates to: RTGWRQDRECISATGPSFWGLSP*CSFMLS
Trigger: ACTTAGCATAAATGAGCACCAGGGTGAGAGTCCCCA...GAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp CCATACTTCTGCTCTGAGAGGAGACTGACACGGATTGATGGCCAAAGATCTCCAAGGAGGTTGCCGGGCTaGTTCCAAAAGCTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: PYFCSERRLTRIDGQRSPRRLPG*FQKLKA
Trigger: GGCCTTCAGCTTTTGGAACCAGCCCGGCAACCTCCT...TGGAGATCTTTGGCCATCAATCCGTGTCAGTCTCCTCTCAGAGCAGAAGTATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CCA 90 bp GGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTATTCTTCTGAGGGGAGGTCACTaGGCTCGTTCCCGGGGACTG +
Preference number: 4 (lower is better)
Translates to: GPSFQFLVHPTEYTLCILLRGGH*ARSRGL
Trigger: CAGTCCCCGGGAACGAGCCCAGTGACCTCCCCTCAG...AAGAATACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CCA 90 bp GTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATTAGGGGACTTCGGTTaGGGGGAAACTGGAGTGGGA +
Preference number: 4 (lower is better)
Translates to: VHLCHWSQFPVSGASNRVLGDFG*GETGVG
Trigger: TCCCACTCCAGTTTCCCCCCAACCGAAGTCCCCTAA...TACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CCA 90 bp TCATGCTGGGAGAGTTCCCAGACCCCAGAAAGGTTGGATAAGGAGGGCCCACAGGGACTCGGGGGACAATaGGTAAACTTTGAGGATCAA +
Preference number: 4 (lower is better)
Translates to: SCWESSQTPERLDKEGPQGLGGQ*VNFEDQ
Trigger: TTGATCCTCAAAGTTTACCCATTGTCCCCCGAGTCC...CTGTGGGCCCTCCTTATCCAACCTTTCTGGGGTCTGGGAACTCTCCCAGCATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CCA 90 bp CGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGCTCAAAATAAGGGCTaGAGAGTGGGGAACCCGAGT +
Preference number: 4 (lower is better)
Translates to: RECISATGPSFQFLVHPTAQNKG*RVGNPS
Trigger: ACTCGGGTTCCCCACTCTCCAGCCCTTATTTTGAGC...TGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537428.2
3UTR CAA 72 bp GTGAGTCAGATCTTCCACCTGTACCTGGATGCTGTATaGATTGGCCAGGAGCTCAATGGCACCTTGCACCAC +
Preference number: 4 (lower is better)
Translates to: VSQIFHLYLDAV*IGQELNGTLHH
Trigger: GTGGTGCAAGGTGCCATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTACAGGTGGAAGATCTGACTCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
3UTR CAA 72 bp ACGGTTTTGTGGCAGAAGCAGCCTCCTAAGCCACATTaGGGCAGCAGTATTGTTGACAGCAGGAATGGCCAG +
Preference number: 4 (lower is better)
Translates to: TVLWQKQPPKPH*GSSIVDSRNGQ
Trigger: CTGGCCATTCCTGCTGTCAACAATACTGCTGCCCAAATGTGGCTTAGGAGGCTGCTTCTGCCACAAAACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR TCA 90 bp AGCTGTGAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATTGGGCTCTGAGAGGAGACTaGCACGGATTGATGGCCAAA +
Preference number: 4 (lower is better)
Translates to: SCEGSSVVWLFGTGRDHWALRGD*HGLMAK
Trigger: TTTGGCCATCAATCCGTGTCAGTCTCCTCTCAGAGC...CCAATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTCACAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp TGTGAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATTGGCAGGCTCTGAGAGGAGACTaGCACGGATTGATGGCCAAA +
Preference number: 4 (lower is better)
Translates to: CEGSSVVWLFGTGRDHWQALRGD*HGLMAK
Trigger: TTTGGCCATCAATCCGTGTCAGTCTCCTCTCAGAGC...CTGCCAATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp CCAGGTCTGGCAGGAGGGAAGCGACTGATATCCCCTCTGTCAAAAGTGAAGCATACCATACTTCTGCTCTaGGAGGAGACTGACACGGAT +
Preference number: 4 (lower is better)
Translates to: PGLAGGKRLISPLSKVKHTILLL*EETDTD
Trigger: ATCCGTGTCAGTCTCCTCTCAGAGCAGAAGTATGGT...ATGCTTCACTTTTGACAGAGGGGATATCAGTCGCTTCCCTCCTGCCAGACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
CDS-3UTR TCA 90 bp ATCCCCTCTGTCAAAAGTGAAGCATCGAAGGTTCGGACTGCAGGCCCAGGAGGCAGGCAGCAAAGTTATTaGCCAGTGCACCATACTTCT +
Preference number: 4 (lower is better)
Translates to: IPSVKSEASKVRTAGPGGRQQSY*PVHHTS
Trigger: AGAAGTATGGTGCACTGGTCAATAACTTTGCTGCCT...GCCTCCTGGGCCTGCAGTCCGAACCTTCGATGCTTCACTTTTGACAGAGGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
CDS-3UTR TCA 90 bp CAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTAGGCAGCAAAGTTATTaGCCAGTGCACCATACTTCT +
Preference number: 4 (lower is better)
Translates to: QDGDRTESASLPLVPVSSRQQSY*PVHHTS
Trigger: AGAAGTATGGTGCACTGGTCAATAACTTTGCTGCCT...ACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp AGCTGTGAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATTGGCCCCTCTGTCAAAAGTaGAGCATCGAAGGTTCGGAC +
Preference number: 4 (lower is better)
Translates to: SCEGSSVVWLFGTGRDHWPLCQK*SIEGSD
Trigger: GTCCGAACCTTCGATGCTTCACTTTTGACAGAGGGG...CCAATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTCACAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
CDS-3UTR TCA 90 bp GCAGAAGTACATGGGGCCAAAATTGGCCATGAGGTTTGGTATTACCAGCTCCCCCAGGAGGGAAGCGACTaGTATCCCCTCTGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: AEVHGAKIGHEVWYYQLPQEGSD*YPLCQK
Trigger: CTTTTGACAGAGGGGATATCAGTCGCTTCCCTCCTG...GGGGAGCTGGTAATACCAAACCTCATGGCCAATTTTGGCCCCATGTACTTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000307089.7
ENST00000498008.5
CDS-3UTR TCA 90 bp CGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCGAGGTAACTCGAACTTaGTTTCCATCCCTGATCTCT +
Preference number: 4 (lower is better)
Translates to: RTGWRQDRECISATGPSFEVTRT*FPSLIS
Trigger: AGAGATCAGGGATGGAAATCAAGTTCGAGTTACCTC...GAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp CGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAACCTGGATGCTGTATTaGTTGGCCAGGAGCTCAATG +
Preference number: 4 (lower is better)
Translates to: RECISATGPSFQFLVHPTTWMLY*LARSSM
Trigger: CATTGAGCTCCTGGCCAATCAATACAGCATCCAGGT...TGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp TGTTGTTCTCCTCCTCATGAAGGGAGTGGCGGTCTGTGGTACAGGGCACATCCAAAAACCCTTCGGAAGTaGGTCAGATCTTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: CCSPPHEGSGGLWYRAHPKTLRK*VRSSTC
Trigger: ACAGGTGGAAGATCTGACTCACTTCCGAAGGGTTTT...TGGATGTGCCCTGTACCACAGACCGCCACTCCCTTCATGAGGAGGAGAACAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp AATAGACAACATGGCCTCCTGGTTTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTACCAGCTCCCCAACCTaGCAGGATGAGAAGAAACAA +
Preference number: 4 (lower is better)
Translates to: NRQHGLLVWWQGVQPQEATSSPT*QDEKKQ
Trigger: TTGTTTCTTCTCATCCTGTCAGGTTGGGGAGCTGGT...AGCTTCTTGCGGCTGGACTCCTTGCCACCAAACCAGGAGGCCATGTTGTCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp AGGTCTGGCAGGAGGGAAGCGACTGATATCCCCTCTGTCAAAAGTGAAGCATCGACCAGCTCCCCAACCTaGCAGGATGAGAAGAAACAA +
Preference number: 4 (lower is better)
Translates to: RSGRREATDIPSVKSEASTSSPT*QDEKKQ
Trigger: TTGTTTCTTCTCATCCTGTCAGGTTGGGGAGCTGGT...CGATGCTTCACTTTTGACAGAGGGGATATCAGTCGCTTCCCTCCTGCCAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR TCA 90 bp CTTCCACCTGTACCTGGATGCTGTATTGATTGGCCAGGAGCTCAATGGCACCTTGCTTCAGGGATTGGGTaGTACTATGTCAGCCTACGC +
Preference number: 4 (lower is better)
Translates to: LPPVPGCCIDWPGAQWHLASGIG*YYVSLR
Trigger: GCGTAGGCTGACATAGTATCACCCAATCCCTGAAGC...AAGGTGCCATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTACAGGTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp GCAGAAGTACATGGGGCCAAAATTGGCCATGAGGTTTGGTATTACCAGCTCCCCAGCCTACTGAGTAGCTaGGATTACAGGCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: AEVHGAKIGHEVWYYQLPSLLSS*DYRHLP
Trigger: TGGCAGGTGCCTGTAATCTCAGCTACTCAGTAGGCT...GGGGAGCTGGTAATACCAAACCTCATGGCCAATTTTGGCCCCATGTACTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR TCA 90 bp GCAGAAGTACATGGGGCCAAAATTGGCCATGAGGTTTGGTATTACCAGCTCCCCCGGCAACAGCCAGTCTaGAGCAACGCTAGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: AEVHGAKIGHEVWYYQLPRQQPV*SNASVF
Trigger: AAAGACACTAGCGTTGCTTCAGACTGGCTGTTGCCG...GGGGAGCTGGTAATACCAAACCTCATGGCCAATTTTGGCCCCATGTACTTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp TCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTCCAGGGCTTCCAGTaGGGCAAGAAAAAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: SLPLVPVSSFWCIQQSIPFQGFQ*GKKKGL
Trigger: GAGACCCTTTTTCTTGCCTCACTGGAAGCCCTGGAA...GGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537428.2
CDS-3UTR TCA 90 bp CCATACTTCTGCTCTGAGAGGAGACTGACACGGATTGATGGCCAAAGATCTCCAGCGAGCAAGAGGAGGTaGAATCGTGAGGCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: PYFCSERRLTRIDGQRSPASKRR*NREASS
Trigger: GGAACTTGCCTCACGATTTCACCTCCTCTTGCTCGC...TGGAGATCTTTGGCCATCAATCCGTGTCAGTCTCCTCTCAGAGCAGAAGTATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR TCA 90 bp TCATGCTGGGAGAGTTCCCAGACCCCAGAAAGGTTGGATAAGGAGGGCCCACAGTTTGGGGCTGGAATTTaGAGGAGTTGTGATGTATGG +
Preference number: 4 (lower is better)
Translates to: SCWESSQTPERLDKEGPQFGAGI*RSCDVW
Trigger: CCATACATCACAACTCCTTCAAATTCCAGCCCCAAA...CTGTGGGCCCTCCTTATCCAACCTTTCTGGGGTCTGGGAACTCTCCCAGCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR GCA 90 bp CCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTATGGCCACCCTCAGACTaGAGTTCCCAGTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: PLVPVSSFWCIQQSIPFVWPPSD*SSQWEM
Trigger: CATCTCCCACTGGGAACTGCAGTCTGAGGGTGGCCA...TACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp GTCCTTATGCACATGTGGACTGCACTGCAAAGTGCCTTTGGATTGAATCATCATATCGAAGGTTCGGACTaGAGGCCCAGGAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: VLMHMWTALQSAFGLNHHIEGSD*RPRRQG
Trigger: CCCCTGCCTCCTGGGCCTGCAGTCCGAACCTTCGAT...ATGATGATTCAATCCAAAGGCACTTTGCAGTGCAGTCCACATGTGCATAAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR GCA 90 bp ACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCAGCAAGAAGCTGCACTTaGAGCACAGGCAATATCTGT +
Preference number: 4 (lower is better)
Translates to: TGPRVHLCHWSQFPVSGAARSCT*STGNIC
Trigger: ACAGATATTGCCTGTGCTGCAAGTGCAGCTTCTTGC...TGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp AGAAAGACACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCACCTGTACCTGGATaGTGTATTGATTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: RKTRTGWRQDRECISATGPPVPG*CIDWPG
Trigger: TCCTGGCCAATCAATACAGCATCCAGGTACAGGTGG...ACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTGTCTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp CTGGCTATTCGGGACGGGGAGAGATCATTGGCAGCAAGATTGCGGCAACAGCCAGTTTCCAGTTTCTGGTaGATCCAACAGAGTATACCC +
Preference number: 4 (lower is better)
Translates to: LAIRDGERSLAARLRQQPVSSFW*IQQSIP
Trigger: GGGTATACTCTGTTGGATGCACCAGAAACTGGAAAC...TGGCTGTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTCCCGAATAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp AGACAACATGGCCTCCTGGTTTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTGCAGCACCAGAGCTCAGCTaGAGACTAGAAACAACAAAA +
Preference number: 4 (lower is better)
Translates to: RQHGLLVWWQGVQPQEAAAPELS*RLETTK
Trigger: TTTTGTTGTTTCTAGTCTGCAGCTGAGCTCTGGTGC...TGCAGCTTCTTGCGGCTGGACTCCTTGCCACCAAACCAGGAGGCCATGTTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR GCA 90 bp AGCACTTACATGATCCCAGGCAGCAAAGTTATTGACCAGTGCACCATACTTCTGTCTGTGGCAGCCTTTTaGCAGGGTTTGGGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: STYMIPGSKVIDQCTILLSVAAF*QGLGRQ
Trigger: CTGCCGGCCCAAACCCTGGCAAAAGGCTGCCACAGA...CAGAAGTATGGTGCACTGGTCAATAACTTTGCTGCCTGGGATCATGTAAGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469918.5
CDS-3UTR GCA 90 bp ATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTCATTGGCAGCAAGATTaGGGCAACAGCCAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: METGPRVHLCHWSQFPVSHWQQD*GNSQSE
Trigger: TTCAGACTGGCTGTTGCCGCAATCTTGCTGCCAATG...AGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp AATAGACAACATGGCCTCCTGGTTTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTACTTCAGATGAGGAGTaGACAAGTCGGTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: NRQHGLLVWWQGVQPQEATSDEE*TSRSWL
Trigger: CAACCAGGACCGACTTGTGCACTCCTCATCTGAAGT...AGCTTCTTGCGGCTGGACTCCTTGCCACCAAACCAGGAGGCCATGTTGTCTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp GATCTTCCACCTGTACCTGGATGCTGTATTGATTGGCCAGGAGCTCAATGGCACTTTGTTGAGGATTACTaGTCCGGCCCCAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: DLPPVPGCCIDWPGAQWHFVEDY*SGPSFC
Trigger: GCAGAAGCTGGGGCCGGAGCAGTAATCCTCAACAAA...GTGCCATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTACAGGTGGAAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp GGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTTATGGTGAGGACTCTTaGTCTGTGACTTTTGCCTCG +
Preference number: 4 (lower is better)
Translates to: GWRQDRECISATGPSFQFYGEDS*SVTFAS
Trigger: CGAGGCAAAAGTCACAGAGCAAGAGTCCTCACCATA...AAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp GACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCTCTGGTCAGAACTTTTaGTCTGGCCCTCATTTCTTG +
Preference number: 4 (lower is better)
Translates to: DRTESASLPLVPVSSFWCSGQNF*SGPHFL
Trigger: CAAGAAATGAGGGCCAGAGCAAAAGTTCTGACCAGA...GCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp TGGAAACCTGCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTGTGGGCCCCTGGGAGTaGTATAGGTGTCACACAGGG +
Preference number: 4 (lower is better)
Translates to: WKPADAPQLDSRTANLLLVGPWE*YRCHTG
Trigger: CCCTGTGTGACACCTATAGCACTCCCAGGGGCCCAC...AAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGCAGGTTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CCA 90 bp ACACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTGTTCCCAGTGGGAGATaGCTTCATTCACAAAATCCT +
Preference number: 4 (lower is better)
Translates to: TRTGWRQDRECISATGPSVPSGR*LHSQNP
Trigger: AGGATTTTGTGAATGAAGCCATCTCCCACTGGGAAC...ACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp TCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCGGATCTTCTGTAGTCTaGCTATTCGGGACGGGGAGA +
Preference number: 4 (lower is better)
Translates to: SLPLVPVSSFWCIQQSIPGSSVV*LFGTGR
Trigger: TCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCC...GGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp TTTGCAGAAGTACATGGGGCCAAAATTGGCCATGAGGTTTGGTATTACCAGCTCGGGAGTGGCGGTCTGTaGTACAGGGCACATCCACCA +
Preference number: 4 (lower is better)
Translates to: FAEVHGAKIGHEVWYYQLGSGGL*YRAHPP
Trigger: TGGTGGATGTGCCCTGTACCACAGACCGCCACTCCC...GAGCTGGTAATACCAAACCTCATGGCCAATTTTGGCCCCATGTACTTCTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp CTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGGGGAGTGGCGGTCTGTaGTACAGGGCACATCCACCA +
Preference number: 4 (lower is better)
Translates to: LMLHNWTAGQQIFYFLLPGSGGL*YRAHPP
Trigger: TGGTGGATGTGCCCTGTACCACAGACCGCCACTCCC...CGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp CTTCAGGGATTGGGTGATACTATGTCAGCCTACGCATTTTGCAGAAGTACATGGCATGGCCTCCTGGTTTaGTGGCAAGGAGTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: LQGLGDTMSAYAFCRSTWHGLLV*WQGVQP
Trigger: CGGCTGGACTCCTTGCCACCAAACCAGGAGGCCATG...CCATGTACTTCTGCAAAATGCGTAGGCTGACATAGTATCACCCAATCCCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp AGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAAAGACACGAACAGGATaGAGACAGGACCGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: RVHLCHWSQFPVSGASNRKTRTG*RQDREC
Trigger: GCACTCTCGGTCCTGTCTCCATCCTGTTCGTGTCTT...TCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp AGTGCACCATACTTCTGCTCTGAGAGGAGACTGACACGGATTGATGGCCAAAGATGTGAGCCTGCTCACTaGCTTCTCCTTCTAAGCCCC +
Preference number: 4 (lower is better)
Translates to: SAPYFCSERRLTRIDGQRCEPAH*LLLLSP
Trigger: GGGGCTTAGAAGGAGAAGCCAGTGAGCAGGCTCACA...TCTTTGGCCATCAATCCGTGTCAGTCTCCTCTCAGAGCAGAAGTATGGTGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp CTATGTGAGGCATCCATCCTGGTTTTGGAAGAGCTCAAATCAGAAGTTCCCAGCTGCTGTCGCCCACGCTaGAGTGCAATGGCGCTATCT +
Preference number: 4 (lower is better)
Translates to: LCEASILVLEELKSEVPSCCRPR*SAMALS
Trigger: AGATAGCGCCATTGCACTCCAGCGTGGGCGACAGCA...GCTGGGAACTTCTGATTTGAGCTCTTCCAAAACCAGGATGGATGCCTCACATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CCA 90 bp AGTGCACCATACTTCTGCTCTGAGAGGAGACTGACACGGATTGATGGCCAAAGAGGAATTTGGGCTCTGTaGCAGCCTAGCGTCACACAG +
Preference number: 4 (lower is better)
Translates to: SAPYFCSERRLTRIDGQRGIWAL*QPSVTQ
Trigger: CTGTGTGACGCTAGGCTGCCACAGAGCCCAAATTCC...TCTTTGGCCATCAATCCGTGTCAGTCTCCTCTCAGAGCAGAAGTATGGTGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp CGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCAAGAAAAAGGGTCTCTaGAGAAGCAAGGAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: RTGWRQDRECISATGPSFKKKGL*RSKESP
Trigger: TGGACTCTCCTTGCTTCTCCAGAGACCCTTTTTCTT...GAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537428.2
CDS-3UTR CCA 90 bp ATATCCCCTCTGTCAAAAGTGAAGCATCGAAGGTTCGGACTGCAGGCCCAGGAGGGAATTTGGGCTCTGTaGCAGCCTAAAAGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: ISPLSKVKHRRFGLQAQEGIWAL*QPKRER
Trigger: CCTCTCTCTTTTAGGCTGCCACAGAGCCCAAATTCC...CTCCTGGGCCTGCAGTCCGAACCTTCGATGCTTCACTTTTGACAGAGGGGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486270.5
CDS-3UTR CCA 90 bp TGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGTCATTTATGCTAAGTTaGGGACTCTCACTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: WRQDRECISATGPSFQFLSFMLS*GLSLWP
Trigger: GGGCCAGAGTGAGAGTCCCCAACTTAGCATAAATGA...CAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp GGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGATCTATGCCTTGCTCTaGCCTAGATTTTTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: GDRTESASLPLVPVSSFWIYALL*PRFLVW
Trigger: CCAGACCAAAAATCTAGGCCAGAGCAAGGCATAGAT...CCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp CATAGCTGTGAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATAAAGCTGCCAGTAGGTaGGGAAGATGCTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: HSCEGSSVVWLFGTGRDHKAASR*GRCWGE
Trigger: CTCTCCCCAGCATCTTCCCCACCTACTGGCAGCTTT...ATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTCACAGCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR TCA 90 bp AATAGACAACATGGCCTCCTGGTTTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTGAGACTGACACGGATTaGTGGCCAAAGATCTCCAAA +
Preference number: 4 (lower is better)
Translates to: NRQHGLLVWWQGVQPQEAETDTD*WPKISK
Trigger: TTTGGAGATCTTTGGCCATCAATCCGTGTCAGTCTC...AGCTTCTTGCGGCTGGACTCCTTGCCACCAAACCAGGAGGCCATGTTGTCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp TCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCACCATACTTCTGCTCTaGGAGGAGACTGACACGGAT +
Preference number: 4 (lower is better)
Translates to: SLPLVPVSSFWCIQQSIPTILLL*EETDTD
Trigger: ATCCGTGTCAGTCTCCTCTCAGAGCAGAAGTATGGT...GGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp GCAGAAGTACATGGGGCCAAAATTGGCCATGAGGTTTGGTATTACCAGCTCCCCACCATACTTCTGCTCTaGGAGGAGACTGACACGGAT +
Preference number: 4 (lower is better)
Translates to: AEVHGAKIGHEVWYYQLPTILLL*EETDTD
Trigger: ATCCGTGTCAGTCTCCTCTCAGAGCAGAAGTATGGT...GGGGAGCTGGTAATACCAAACCTCATGGCCAATTTTGGCCCCATGTACTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp GTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTAACCATACTTCTGCTCTaGGAGGAGACTGACACGGAT +
Preference number: 4 (lower is better)
Translates to: VHLCHWSQFPVSGASNRVTILLL*EETDTD
Trigger: ATCCGTGTCAGTCTCCTCTCAGAGCAGAAGTATGGT...TACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp AGTGCACCATACTTCTGCTCTGAGAGGAGACTGACACGGATTGATGGCCAAAGACCCCTCTGTCAAAAGTaGAGCATCGAAGGTTCGGAC +
Preference number: 4 (lower is better)
Translates to: SAPYFCSERRLTRIDGQRPLCQK*SIEGSD
Trigger: GTCCGAACCTTCGATGCTTCACTTTTGACAGAGGGG...TCTTTGGCCATCAATCCGTGTCAGTCTCCTCTCAGAGCAGAAGTATGGTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
CDS-3UTR TCA 90 bp CATAGCTGTGAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATCAGGAGGGAAGCGACTaGTATCCCCTCTGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: HSCEGSSVVWLFGTGRDHQEGSD*YPLCQK
Trigger: CTTTTGACAGAGGGGATATCAGTCGCTTCCCTCCTG...ATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTCACAGCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
CDS-3UTR TCA 90 bp CCAGGTCTGGCAGGAGGGAAGCGACTGATATCCCCTCTGTCAAAAGTGAAGCATCTTGATTTCCATCCCTaGTCTCTTCAGGCACATAGC +
Preference number: 4 (lower is better)
Translates to: PGLAGGKRLISPLSKVKHLDFHP*SLQAHS
Trigger: GCTATGTGCCTGAAGAGATCAGGGATGGAAATCAAG...ATGCTTCACTTTTGACAGAGGGGATATCAGTCGCTTCCCTCCTGCCAGACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486270.5
ENST00000498008.5
CDS-3UTR TCA 90 bp TCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCACCTGGATGCTGTATTaGTTGGCCAGGAGCTCAATG +
Preference number: 4 (lower is better)
Translates to: SLPLVPVSSFWCIQQSIPTWMLY*LARSSM
Trigger: CATTGAGCTCCTGGCCAATCAATACAGCATCCAGGT...GGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp GTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTAACCTGGATGCTGTATTaGTTGGCCAGGAGCTCAATG +
Preference number: 4 (lower is better)
Translates to: VHLCHWSQFPVSGASNRVTWMLY*LARSSM
Trigger: CATTGAGCTCCTGGCCAATCAATACAGCATCCAGGT...TACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp AGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCCCAACCTGACAGGATaGGAAGAAACAAAATGTGTC +
Preference number: 4 (lower is better)
Translates to: RQDRECISATGPSFQFLVPNLTG*EETKCV
Trigger: GACACATTTTGTTTCTTCTCATCCTGTCAGGTTGGG...CACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp ACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCACCCAACCTGACAGGATaGGAAGAAACAAAATGTGTC +
Preference number: 4 (lower is better)
Translates to: TGPRVHLCHWSQFPVSGAPNLTG*EETKCV
Trigger: GACACATTTTGTTTCTTCTCATCCTGTCAGGTTGGG...TGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp AGAAAGACACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTGTAGGGGTTAATGAGTaGGTTGGAAACCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: RKTRTGWRQDRECISATGVGVNE*VGNLLM
Trigger: CATCAGCAGGTTTCCAACTCACTCATTAACCCCTAC...ACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTGTCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp TTTGCAGAAGTACATGGGGCCAAAATTGGCCATGAGGTTTGGTATTACCAGCTCCCAGGCGGGCTTAATTaGGCCTGTTGGCTGCTCAAG +
Preference number: 4 (lower is better)
Translates to: FAEVHGAKIGHEVWYYQLPGGLN*ACWLLK
Trigger: CTTGAGCAGCCAACAGGCTCAATTAAGCCCGCCTGG...GAGCTGGTAATACCAAACCTCATGGCCAATTTTGGCCCCATGTACTTCTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR TCA 90 bp CCATACTTCTGCTCTGAGAGGAGACTGACACGGATTGATGGCCAAAGATCTCCACGGCAACAGCCAGTCTaGAGCAACGCTAGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: PYFCSERRLTRIDGQRSPRQQPV*SNASVF
Trigger: AAAGACACTAGCGTTGCTTCAGACTGGCTGTTGCCG...TGGAGATCTTTGGCCATCAATCCGTGTCAGTCTCCTCTCAGAGCAGAAGTATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp CATAGCTGTGAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATGGGCCCACAGAATCTTaGGGTGTGAACCAAAACAGG +
Preference number: 4 (lower is better)
Translates to: HSCEGSSVVWLFGTGRDHGPTES*GVNQNR
Trigger: CCTGTTTTGGTTCACACCTCAAGATTCTGTGGGCCC...ATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTCACAGCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp GGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTATTCTTGAGGAGGTGAAATCGTaGGGCAAGTTCCCGGGGTCC +
Preference number: 4 (lower is better)
Translates to: GPSFQFLVHPTEYTLCILEEVKS*GKFPGS
Trigger: GGACCCCGGGAACTTGCCTCACGATTTCACCTCCTC...AAGAATACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR TCA 90 bp GAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGGTATGTAGGCCTCTaGGGAAAGATGGGAGTAATG +
Preference number: 4 (lower is better)
Translates to: ESASLPLVPVSSFWCIQQRYVGL*GKMGVM
Trigger: CATTACTCCCATCTTTCCTCAGAGGCCTACATACCT...CTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR TCA 90 bp ATCCCCTCTGTCAAAAGTGAAGCATCGAAGGTTCGGACTGCAGGCCCAGGAGGCACAATGGGTAAACTTTaGGGATCAAAGGGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: IPSVKSEASKVRTAGPGGTMGKL*GSKGVL
Trigger: GAGAACACCCTTTGATCCTCAAAGTTTACCCATTGT...GCCTCCTGGGCCTGCAGTCCGAACCTTCGATGCTTCACTTTTGACAGAGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR GCA 90 bp ATCAGAGGTTTGAGGGTCATGCTGGGAGAGTTCCCAGACCCCAGAAAGGTTGGAGCAAGAAGCTGCACTTaGAGCACAGGCAATATCTGT +
Preference number: 4 (lower is better)
Translates to: IRGLRVMLGEFPDPRKVGARSCT*STGNIC
Trigger: ACAGATATTGCCTGTGCTGCAAGTGCAGCTTCTTGC...TCCAACCTTTCTGGGGTCTGGGAACTCTCCCAGCATGACCCTCAAACCTCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp ACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAATCAGCCTACGCATTTTaGAGAAGTACATGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: TESASLPLVPVSSFWCIQSAYAF*RSTWGQ
Trigger: TTGGCCCCATGTACTTCTGCAAAATGCGTAGGCTGA...TTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp AGACAACATGGCCTCCTGGTTTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTGCACTTATTGCCGAAAACTaGAGAAAGACACGAACAGGA +
Preference number: 4 (lower is better)
Translates to: RQHGLLVWWQGVQPQEAALIAEN*RKTRTG
Trigger: TCCTGTTCGTGTCTTTCTGCAGTTTTCGGCAATAAG...TGCAGCTTCTTGCGGCTGGACTCCTTGCCACCAAACCAGGAGGCCATGTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp GCAAGGAGTCCAGCCGCAAGAAGCTGCACTTGCAGCACAGGCAATATCTGTCGCCTTATTGCCGAAAACTaGAGAAAGACACGAACAGGA +
Preference number: 4 (lower is better)
Translates to: ARSPAARSCTCSTGNICRLIAEN*RKTRTG
Trigger: TCCTGTTCGTGTCTTTCTGCAGTTTTCGGCAATAAG...GCGACAGATATTGCCTGTGCTGCAAGTGCAGCTTCTTGCGGCTGGACTCCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp CTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTCCCACAATCCCAACTaGTACATCTCCAAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LCHWSQFPVSGASNRVYPSHNPN*YISKSS
Trigger: GGAGCTCTTGGAGATGTAGCAGTTGGGATTGTGGGA...AGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR GCA 90 bp AGCTGTGAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATTGGCATTGGCAGCAAGATTaGGGCAACAGCCAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: SCEGSSVVWLFGTGRDHWHWQQD*GNSQSE
Trigger: TTCAGACTGGCTGTTGCCGCAATCTTGCTGCCAATG...CCAATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTCACAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp GTGAGTTGGAAACCTGCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTGTCGGTCCTGGTTGCTaGAGCTGGGATGCTTGCTAT +
Preference number: 4 (lower is better)
Translates to: VSWKPADAPQLDSRTANLVGPGC*SWDACY
Trigger: ATAGCAAGCATCCCAGCTGCAGCAACCAGGACCGAC...AAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGCAGGTTTCCAACTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp GAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGGATGAGAGGATTCGTTaGACCTTTTGCCAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: ESASLPLVPVSSFWCIQQDERIR*TFCQGL
Trigger: CAAACCCTGGCAAAAGGTGCAACGAATCCTCTCATC...CTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537428.2
CDS-3UTR GCA 90 bp AGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGATACAGCTGGGATTGGTaGTACAGCTGGAATCCTTGG +
Preference number: 4 (lower is better)
Translates to: RVHLCHWSQFPVSGASNRYSWDW*YSWNPW
Trigger: CCAAGGATTCCAGCTGTAGCACCAATCCCAGCTGTA...TCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp TGTGAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATTGGCAGTCAGATGATGCCTCTTaGTCCAGCTCTGACTTCTGC +
Preference number: 4 (lower is better)
Translates to: CEGSSVVWLFGTGRDHWQSDDAS*SSSDFC
Trigger: GCAGAAGTCAGAGCTGGAGCAAGAGGCATCATCTGA...CTGCCAATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp GCAGAAGTACATGGGGCCAAAATTGGCCATGAGGTTTGGTATTACCAGCTCCCCTTGCTCTGTGACTTTTaGCTCGCTGGGACTCTTGCT +
Preference number: 4 (lower is better)
Translates to: AEVHGAKIGHEVWYYQLPLLCDF*LAGTLA
Trigger: AGCAAGAGTCCCAGCGAGGCAAAAGTCACAGAGCAA...GGGGAGCTGGTAATACCAAACCTCATGGCCAATTTTGGCCCCATGTACTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp CCATACTTCTGCTCTGAGAGGAGACTGACACGGATTGATGGCCAAAGATCTCCAGGATCTTCTGTAGTCTaGCTATTCGGGACGGGGAGA +
Preference number: 4 (lower is better)
Translates to: PYFCSERRLTRIDGQRSPGSSVV*LFGTGR
Trigger: TCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCC...TGGAGATCTTTGGCCATCAATCCGTGTCAGTCTCCTCTCAGAGCAGAAGTATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp TGCAGCACAGGCAATATCTGTCGCTCCTTCTTCCTTGACCGCTTAAAGATGTTGGACAACATGGCCTCCTaGTTTGGTGGCAAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: CSTGNICRSFFLDRLKMLDNMAS*FGGKES
Trigger: GGACTCCTTGCCACCAAACCAGGAGGCCATGTTGTC...CAACATCTTTAAGCGGTCAAGGAAGAAGGAGCGACAGATATTGCCTGTGCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp GCCGCAAGAAGCTGCACTTGCAGCACAGGCAATATCTGTCGCTCCTTCTTCCTTATTGGCCATGAGGTTTaGTATTACCAGCTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: AARSCTCSTGNICRSFFLIGHEV*YYQLPN
Trigger: GTTGGGGAGCTGGTAATACCAAACCTCATGGCCAAT...AAGGAAGAAGGAGCGACAGATATTGCCTGTGCTGCAAGTGCAGCTTCTTGCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp ACACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTCCAGTTTCCAGTTTCTaGTGCATCCAACAGAGTATA +
Preference number: 4 (lower is better)
Translates to: TRTGWRQDRECISATGPSPVSSF*CIQQSI
Trigger: TATACTCTGTTGGATGCACCAGAAACTGGAAACTGG...ACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp CACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTCCAGTTTCCAGTTTCTaGTGCATCCAACAGAGTATA +
Preference number: 4 (lower is better)
Translates to: HEQDGDRTESASLPLVPVPVSSF*CIQQSI
Trigger: TATACTCTGTTGGATGCACCAGAAACTGGAAACTGG...AACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp AGTGCACCATACTTCTGCTCTGAGAGGAGACTGACACGGATTGATGGCCAAAGACAGGCAAGGTCGCTATaGTATTTTCCGAGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: SAPYFCSERRLTRIDGQRQARSL*YFPRGE
Trigger: CTCACCCCTCGGAAAATACCATAGCGACCTTGCCTG...TCTTTGGCCATCAATCCGTGTCAGTCTCCTCTCAGAGCAGAAGTATGGTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469918.5
CDS-3UTR CCA 90 bp CCATACTTCTGCTCTGAGAGGAGACTGACACGGATTGATGGCCAAAGATCTCCAGGAATTTGGGCTCTGTaGCAGCCTTTTGCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: PYFCSERRLTRIDGQRSPGIWAL*QPFARV
Trigger: AACCCTGGCAAAAGGCTGCCACAGAGCCCAAATTCC...TGGAGATCTTTGGCCATCAATCCGTGTCAGTCTCCTCTCAGAGCAGAAGTATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469918.5
CDS-3UTR CCA 90 bp GGTCCTGGTTGCTGCAGCTGGGATGCTTGCTATAGCTGGCAATCTTGTTACTATAGACCCCAGAAAGGTTaGATAAGGAGGGCCCACAGA +
Preference number: 4 (lower is better)
Translates to: GPGCCSWDACYSWQSCYYRPQKG*IRRAHR
Trigger: TCTGTGGGCCCTCCTTATCCAACCTTTCTGGGGTCT...ATAGTAACAAGATTGCCAGCTATAGCAAGCATCCCAGCTGCAGCAACCAGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp TGCAGCACAGGCAATATCTGTCGCTCCTTCTTCCTTGACCGCTTAAAGATGTTGCTGGGACTCTTGCTCTaGCTCCTGCTATGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: CSTGNICRSFFLDRLKMLLGLLL*LLLCWG
Trigger: TCCCCAACATAGCAGGAGCCAGAGCAAGAGTCCCAG...CAACATCTTTAAGCGGTCAAGGAAGAAGGAGCGACAGATATTGCCTGTGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp CTGCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCGGGGCACAGGCAGATaGCATAGCAAGGACTCCCAG +
Preference number: 4 (lower is better)
Translates to: LLMLHNWTAGQQIFYFLLRGTGR*HSKDSQ
Trigger: CTGGGAGTCCTTGCTATGCCATCTGCCTGTGCCCCG...CAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CCA 90 bp GTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTACTGGGGGAAGTTCTTTaGGGCTGGAATTTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: VHLCHWSQFPVSGASNRVLGEVL*GWNLKE
Trigger: CTCCTTCAAATTCCAGCCCCAAAGAACTTCCCCCAG...TACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR TCA 90 bp GAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATTGGCAGCAACTTGATTTCCATCCCTaGTCTCTTCAGGCACATAGC +
Preference number: 4 (lower is better)
Translates to: EGSSVVWLFGTGRDHWQQLDFHP*SLQAHS
Trigger: GCTATGTGCCTGAAGAGATCAGGGATGGAAATCAAG...TTGCTGCCAATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp AGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAAAAACCCTTCGGAAGTaGGTCAGATCTTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: RVHLCHWSQFPVSGASNRKTLRK*VRSSTC
Trigger: ACAGGTGGAAGATCTGACTCACTTCCGAAGGGTTTT...TCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp CTTCCACCTGTACCTGGATGCTGTATTGATTGGCCAGGAGCTCAATGGCACCTTGGCCAAAATTGGCCATaGGGTTTGGTATTACCAGCT +
Preference number: 4 (lower is better)
Translates to: LPPVPGCCIDWPGAQWHLGQNWP*GLVLPA
Trigger: AGCTGGTAATACCAAACCTCATGGCCAATTTTGGCC...AAGGTGCCATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTACAGGTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp GATTGGCCAGGAGCTCAATGGCACCTTGCACCACATACTCGTTCTGTAAGTGTGGTAGGGGTTAATGAGTaGGTTGGAAACCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: DWPGAQWHLAPHTRSVSVVGVNE*VGNLLM
Trigger: CATCAGCAGGTTTCCAACTCACTCATTAACCCCTAC...CACACTTACAGAACGAGTATGTGGTGCAAGGTGCCATTGAGCTCCTGGCCAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp AGAAAGACACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTTACCATTCTAAAGGATaGGGAAGCCCAGTAATCTCC +
Preference number: 4 (lower is better)
Translates to: RKTRTGWRQDRECISATGYHSKG*GSPVIS
Trigger: GGAGATTACTGGGCTTCCTCATCCTTTAGAATGGTA...ACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTGTCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR TCA 90 bp TCTCCTTCTAAGCCCCTAAGCGGGCAGCAAACTTTAGTACAGGCCTGGAGATGGCTACATTGTCCAAGCTaGTCTAGAATTCCTGGGATC +
Preference number: 4 (lower is better)
Translates to: SPSKPLSGQQTLVQAWRWLHCPS*SRIPGI
Trigger: GATCCCAGGAATTCTAGATCAGCTTGGACAATGTAG...CCATCTCCAGGCCTGTACTAAAGTTTGCTGCCCGCTTAGGGGCTTAGAAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR TCA 90 bp GTGAGTTGGAAACCTGCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCGGCAACAGCCAGTCTaGAGCAACGCTAGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: VSWKPADAPQLDSRTANLRQQPV*SNASVF
Trigger: AAAGACACTAGCGTTGCTTCAGACTGGCTGTTGCCG...AAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGCAGGTTTCCAACTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp GAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGCAGAATCTTGAGGTGTaGACCAAAACAGGGACTTCT +
Preference number: 4 (lower is better)
Translates to: ESASLPLVPVSSFWCIQQQNLEV*TKTGTS
Trigger: AGAAGTCCCTGTTTTGGTTCACACCTCAAGATTCTG...CTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp ATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTCAGAATCTTGAGGTGTaGACCAAAACAGGGACTTCT +
Preference number: 4 (lower is better)
Translates to: METGPRVHLCHWSQFPVSQNLEV*TKTGTS
Trigger: AGAAGTCCCTGTTTTGGTTCACACCTCAAGATTCTG...AGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp CCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTAGGGCCCACAGAATCTTaGGGTGTGAACCAAAACAGG +
Preference number: 4 (lower is better)
Translates to: PLVPVSSFWCIQQSIPFVGPTES*GVNQNR
Trigger: CCTGTTTTGGTTCACACCTCAAGATTCTGTGGGCCC...TACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp GTGAGTTGGAAACCTGCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTGCTGGAATCCTTGGATaGAGGCAAAGGGCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: VSWKPADAPQLDSRTANLAGILG*RQRAAV
Trigger: TACAGCTGCCCTTTGCCTTCATCCAAGGATTCCAGC...AAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGCAGGTTTCCAACTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp GCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGGACTTCTGCTCAGATaGTGCCTCTTGCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: ADAPQLDSRTANLLLLIAGLLLR*CLLLQL
Trigger: GAGCTGGAGCAAGAGGCATCATCTGAGCAGAAGTCC...GGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp CACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTATCTCTTGCTCTGGCCTTaGCCTTTGCCATGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: HWSQFPVSGASNRVYPLYLLLWP*PLPCWG
Trigger: TCCCCAACATGGCAAAGGTCAAGGCCAGAGCAAGAG...ATACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp TTTGCAGAAGTACATGGGGCCAAAATTGGCCATGAGGTTTGGTATTACCAGCTCTCAGGTAGTACTCCATaGCACCCAGGCTGCCAGGTA +
Preference number: 4 (lower is better)
Translates to: FAEVHGAKIGHEVWYYQLSGSTP*HPGCQV
Trigger: TACCTGGCAGCCTGGGTGTCATGGAGTACTACCTGA...GAGCTGGTAATACCAAACCTCATGGCCAATTTTGGCCCCATGTACTTCTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495427.1
CDS-3UTR GCA 90 bp TCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCGCAAGAAGCTGCACTTaGAGCACAGGCAATATCTGT +
Preference number: 4 (lower is better)
Translates to: SLPLVPVSSFWCIQQSIPARSCT*STGNIC
Trigger: ACAGATATTGCCTGTGCTGCAAGTGCAGCTTCTTGC...GGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp GCAGAAGTACATGGGGCCAAAATTGGCCATGAGGTTTGGTATTACCAGCTCCCCTCAGCCTACGCATTTTaGAGAAGTACATGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: AEVHGAKIGHEVWYYQLPSAYAF*RSTWGQ
Trigger: TTGGCCCCATGTACTTCTGCAAAATGCGTAGGCTGA...GGGGAGCTGGTAATACCAAACCTCATGGCCAATTTTGGCCCCATGTACTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp CACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTACCCTTTGTATTCTTaGTTCAGGGATTGGGTGATA +
Preference number: 4 (lower is better)
Translates to: HEQDGDRTESASLPLVPVYPLYS*FRDWVI
Trigger: TATCACCCAATCCCTGAAGCAAGAATACAAAGGGTA...AACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp AGAAAGACACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTGTTTCCAGTTTCTGGTaGATCCAACAGAGTATACCC +
Preference number: 4 (lower is better)
Translates to: RKTRTGWRQDRECISATGVSSFW*IQQSIP
Trigger: GGGTATACTCTGTTGGATGCACCAGAAACTGGAAAC...ACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTGTCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp AGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCTTATTGCCGAAAACTaGAGAAAGACACGAACAGGA +
Preference number: 4 (lower is better)
Translates to: RQDRECISATGPSFQFLVLIAEN*RKTRTG
Trigger: TCCTGTTCGTGTCTTTCTGCAGTTTTCGGCAATAAG...CACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp GCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACATTGGCAGCAAGATTaGGGCAACAGCCAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: ASLPLVPVSSFWCIQQSIHWQQD*GNSQSE
Trigger: TTCAGACTGGCTGTTGCCGCAATCTTGCTGCCAATG...TATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp CTGGCTATTCGGGACGGGGAGAGATCATTGGCAGCAAGATTGCGGCAACAGCCATTACTATCTATGCCTTaGTCTGGCCTAGATTTTTGG +
Preference number: 4 (lower is better)
Translates to: LAIRDGERSLAARLRQQPLLSMP*SGLDFW
Trigger: CCAAAAATCTAGGCCAGAGCAAGGCATAGATAGTAA...TGGCTGTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTCCCGAATAGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp AGCTGTGAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATTGGTGCAGCTGGGATGCTTaGTATAGCTGGCAATCTTGT +
Preference number: 4 (lower is better)
Translates to: SCEGSSVVWLFGTGRDHWCSWDA*YSWQSC
Trigger: ACAAGATTGCCAGCTATAGCAAGCATCCCAGCTGCA...CCAATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTCACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp TTTGCAGAAGTACATGGGGCCAAAATTGGCCATGAGGTTTGGTATTACCAGCTCAAGGGGAAAGGAGGTTaGCGGGCTGGTTCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: FAEVHGAKIGHEVWYYQLKGKGG*RAGSKS
Trigger: GCTTTTGGAACCAGCCCGGCAACCTCCTTTCCCCTT...GAGCTGGTAATACCAAACCTCATGGCCAATTTTGGCCCCATGTACTTCTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CCA 90 bp CTGAGATTACAGGCACCTGCCATCATGCCCTTTTGTACTTTTATAGAGATGGGGTGTGAGCCTGCTCACTaGCTTCTCCTTCTAAGCCCC +
Preference number: 4 (lower is better)
Translates to: LRLQAPAIMPFCTFIEMGCEPAH*LLLLSP
Trigger: GGGGCTTAGAAGGAGAAGCCAGTGAGCAGGCTCACA...CCCCATCTCTATAAAAGTACAAAAGGGCATGATGGCAGGTGCCTGTAATCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CCA 90 bp GATTGGCCAGGAGCTCAATGGCACCTTGCACCACATACTCGTTCTGTAAGTGTGCAGGGGCTCAGTAACTaGCTGGTACAAATGGAACTA +
Preference number: 4 (lower is better)
Translates to: DWPGAQWHLAPHTRSVSVQGLSN*LVQMEL
Trigger: TAGTTCCATTTGTACCAGCCAGTTACTGAGCCCCTG...CACACTTACAGAACGAGTATGTGGTGCAAGGTGCCATTGAGCTCCTGGCCAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CCA 90 bp TCAGATCTTCCACCTGTACCTGGATGCTGTATTGATTGGCCAGGAGCTCAATGGGTCCTTATGCACATGTaGACTGCACTGCAAAGTGCC +
Preference number: 4 (lower is better)
Translates to: SDLPPVPGCCIDWPGAQWVLMHM*TALQSA
Trigger: GGCACTTTGCAGTGCAGTCCACATGTGCATAAGGAC...CCATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTACAGGTGGAAGATCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CCA 90 bp GTATTCTTGCTTCAGGGATTGGGTGATACTATGTCAGCCTACGCATTTTGCAGATGCACAAGTCGGTCCTaGTTGCTGCAGCTGGGATGC +
Preference number: 4 (lower is better)
Translates to: VFLLQGLGDTMSAYAFCRCTSRS*LLQLGC
Trigger: GCATCCCAGCTGCAGCAACCAGGACCGACTTGTGCA...TCTGCAAAATGCGTAGGCTGACATAGTATCACCCAATCCCTGAAGCAAGAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp GCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATATACAGCTGGAATCCTTaGATGAAGGCAAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: ASLPLVPVSSFWCIQQSIYSWNP*MKAKGS
Trigger: GCTGCCCTTTGCCTTCATCCAAGGATTCCAGCTGTA...TATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp GGAGGGAAGCGACTGATATCCCCTCTGTCAAAAGTGAAGCATCGAAGGTTCGGAGATTGGTGCTACAGCTaGAATCCTTGGATGAAGGCA +
Preference number: 4 (lower is better)
Translates to: GGKRLISPLSKVKHRRFGDWCYS*NPWMKA
Trigger: TGCCTTCATCCAAGGATTCCAGCTGTAGCACCAATC...TCCGAACCTTCGATGCTTCACTTTTGACAGAGGGGATATCAGTCGCTTCCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CCA 90 bp TCGGGACGGGGAGAGATCATTGGCAGCAAGATTGCGGCAACAGCCAGTCTGAAGTCGCTGTCACTACTCTaGCATTTGCTAATAATAGTC +
Preference number: 4 (lower is better)
Translates to: SGRGEIIGSKIAATASLKSLSLL*HLLIIV
Trigger: GACTATTATTAGCAAATGCCAGAGTAGTGACAGCGA...CTTCAGACTGGCTGTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTCCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp CGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCTCAGAACTTTTGCTCTaGCCCTCATTTCTTGTTATG +
Preference number: 4 (lower is better)
Translates to: RTGWRQDRECISATGPSFSELLL*PSFLVM
Trigger: CATAACAAGAAATGAGGGCCAGAGCAAAAGTTCTGA...GAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp TGTTGTTCTCCTCCTCATGAAGGGAGTGGCGGTCTGTGGTACAGGGCACATCCATCTGGCCTAGATTTTTaGTCTGGTCAGAACTTTTGC +
Preference number: 4 (lower is better)
Translates to: CCSPPHEGSGGLWYRAHPSGLDF*SGQNFC
Trigger: GCAAAAGTTCTGACCAGACCAAAAATCTAGGCCAGA...TGGATGTGCCCTGTACCACAGACCGCCACTCCCTTCATGAGGAGGAGAACAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp GATTGGCCAGGAGCTCAATGGCACCTTGCACCACATACTCGTTCTGTAAGTGTGGGTCAAGCTGTGGTTTaGGTTCACAAGAGTCTAGAG +
Preference number: 4 (lower is better)
Translates to: DWPGAQWHLAPHTRSVSVGQAVV*VHKSLE
Trigger: CTCTAGACTCTTGTGAACCCAAACCACAGCTTGACC...CACACTTACAGAACGAGTATGTGGTGCAAGGTGCCATTGAGCTCCTGGCCAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR TCA 90 bp CCATACTTCTGCTCTGAGAGGAGACTGACACGGATTGATGGCCAAAGATCTCCAGAGACTGACACGGATTaGTGGCCAAAGATCTCCAAA +
Preference number: 4 (lower is better)
Translates to: PYFCSERRLTRIDGQRSPETDTD*WPKISK
Trigger: TTTGGAGATCTTTGGCCATCAATCCGTGTCAGTCTC...TGGAGATCTTTGGCCATCAATCCGTGTCAGTCTCCTCTCAGAGCAGAAGTATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp GCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGCTCTGAGAGGAGACTaGCACGGATTGATGGCCAAA +
Preference number: 4 (lower is better)
Translates to: ADAPQLDSRTANLLLLIAALRGD*HGLMAK
Trigger: TTTGGCCATCAATCCGTGTCAGTCTCCTCTCAGAGC...GGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp CACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTATGCTCTGAGAGGAGACTaGCACGGATTGATGGCCAAA +
Preference number: 4 (lower is better)
Translates to: HWSQFPVSGASNRVYPLYALRGD*HGLMAK
Trigger: TTTGGCCATCAATCCGTGTCAGTCTCCTCTCAGAGC...ATACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp AGCTGTGAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATTGGAGGCAGCAAAGTTATTaGCCAGTGCACCATACTTCT +
Preference number: 4 (lower is better)
Translates to: SCEGSSVVWLFGTGRDHWRQQSY*PVHHTS
Trigger: AGAAGTATGGTGCACTGGTCAATAACTTTGCTGCCT...CCAATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTCACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp TTCCCAGTGGGAGATGGCTTCATTCACAAAATCCTTGGCACTCAGCTGCTCCAGAGCTTAGCACTTACATaGTCCCAGGCAGCAAAGTTA +
Preference number: 4 (lower is better)
Translates to: FPVGDGFIHKILGTQLLQSLALT*SQAAKL
Trigger: TAACTTTGCTGCCTGGGATCATGTAAGTGCTAAGCT...CTGGAGCAGCTGAGTGCCAAGGATTTTGTGAATGAAGCCATCTCCCACTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
CDS-3UTR TCA 90 bp GATTGGCCAGGAGCTCAATGGCACCTTGCACCACATACTCGTTCTGTAAGTGTGTTTCCTGCCATCCCATaGGGTAACTCGAACTTGATT +
Preference number: 4 (lower is better)
Translates to: DWPGAQWHLAPHTRSVSVFPAIP*GNSNLI
Trigger: AATCAAGTTCGAGTTACCTCATGGGATGGCAGGAAA...CACACTTACAGAACGAGTATGTGGTGCAAGGTGCCATTGAGCTCCTGGCCAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp GTATTCTTGCTTCAGGGATTGGGTGATACTATGTCAGCCTACGCATTTTGCAGATTGTTCTCCTCCTCATaGAGGGAGTGGCGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: VFLLQGLGDTMSAYAFCRLFSSS*REWRSV
Trigger: CACAGACCGCCACTCCCTTCATGAGGAGGAGAACAA...TCTGCAAAATGCGTAGGCTGACATAGTATCACCCAATCCCTGAAGCAAGAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp GATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGAATTGTTCTCCTCCTCATaGAGGGAGTGGCGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: DAPQLDSRTANLLLLIAELFSSS*REWRSV
Trigger: CACAGACCGCCACTCCCTTCATGAGGAGGAGAACAA...TTCGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp GGAGGGAAGCGACTGATATCCCCTCTGTCAAAAGTGAAGCATCGAAGGTTCGGATCGCTCCTTCTTCCTTaGCCGCTTAAAGATGTTGTT +
Preference number: 4 (lower is better)
Translates to: GGKRLISPLSKVKHRRFGSLLLP*PLKDVV
Trigger: AACAACATCTTTAAGCGGTCAAGGAAGAAGGAGCGA...TCCGAACCTTCGATGCTTCACTTTTGACAGAGGGGATATCAGTCGCTTCCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486270.5
ENST00000498008.5
CDS-3UTR TCA 90 bp CTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTCGCTCCTTCTTCCTTaGCCGCTTAAAGATGTTGTT +
Preference number: 4 (lower is better)
Translates to: LCHWSQFPVSGASNRVYPSLLLP*PLKDVV
Trigger: AACAACATCTTTAAGCGGTCAAGGAAGAAGGAGCGA...AGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp GAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAACAAAATGTGTCCATaGAAACCCTTCGGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: ESASLPLVPVSSFWCIQQNKMCP*KPFGSE
Trigger: CTCACTTCCGAAGGGTTTTCATGGACACATTTTGTT...CTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp ATATCCCCTCTGTCAAAAGTGAAGCATCGAAGGTTCGGACTGCAGGCCCAGGAGAACAAAATGTGTCCATaGAAACCCTTCGGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: ISPLSKVKHRRFGLQAQENKMCP*KPFGSE
Trigger: CTCACTTCCGAAGGGTTTTCATGGACACATTTTGTT...CTCCTGGGCCTGCAGTCCGAACCTTCGATGCTTCACTTTTGACAGAGGGGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR TCA 90 bp TTCCCAGTGGGAGATGGCTTCATTCACAAAATCCTTGGCACTCAGCTGCTCCAGCCCAACCTGACAGGATaGGAAGAAACAAAATGTGTC +
Preference number: 4 (lower is better)
Translates to: FPVGDGFIHKILGTQLLQPNLTG*EETKCV
Trigger: GACACATTTTGTTTCTTCTCATCCTGTCAGGTTGGG...CTGGAGCAGCTGAGTGCCAAGGATTTTGTGAATGAAGCCATCTCCCACTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR TCA 90 bp CATAGCTGTGAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATGGCCAAAATTGGCCATaGGGTTTGGTATTACCAGCT +
Preference number: 4 (lower is better)
Translates to: HSCEGSSVVWLFGTGRDHGQNWP*GLVLPA
Trigger: AGCTGGTAATACCAAACCTCATGGCCAATTTTGGCC...ATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTCACAGCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp CCATACTTCTGCTCTGAGAGGAGACTGACACGGATTGATGGCCAAAGATCTCCAAATGAAGACTTCAGATaGGGAGTGCACAAGTCGGTC +
Preference number: 4 (lower is better)
Translates to: PYFCSERRLTRIDGQRSPNEDFR*GVHKSV
Trigger: GACCGACTTGTGCACTCCTCATCTGAAGTCTTCATT...TGGAGATCTTTGGCCATCAATCCGTGTCAGTCTCCTCTCAGAGCAGAAGTATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp GCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGAAAACCTCTTGCTCCAGCTCTaGCTTCTGCCATCATGGGGA +
Preference number: 4 (lower is better)
Translates to: APQLDSRTANLLLLIAENLLLQL*LLPSWG
Trigger: TCCCCATGATGGCAGAAGTCAGAGCTGGAGCAAGAG...GTTTTCGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp GCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGAAAACCTCTTGCTCTGGCCTTaGCCTTTGCCATGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: APQLDSRTANLLLLIAENLLLWP*PLPCWG
Trigger: TCCCCAACATGGCAAAGGTCAAGGCCAGAGCAAGAG...GTTTTCGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp GATTGGCCAGGAGCTCAATGGCACCTTGCACCACATACTCGTTCTGTAAGTGTGCATTTCTTGTTATGGTaGGGACTCTTGCTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: DWPGAQWHLAPHTRSVSVHFLLW*GLLLCD
Trigger: GTCACAGAGCAAGAGTCCTCACCATAACAAGAAATG...CACACTTACAGAACGAGTATGTGGTGCAAGGTGCCATTGAGCTCCTGGCCAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp GATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGAATCACAGTACGTGCCTTaGAGACAGGGACGCCGCATT +
Preference number: 4 (lower is better)
Translates to: DAPQLDSRTANLLLLIAESQYVP*RQGRRI
Trigger: AATGCGGCGTCCCTGTCTTCAAGGCACGTACTGTGA...TTCGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR GCA 90 bp CTTGTACACATCTCCTGGTGTACATGTATGAGTTTCTCTAGGATTTATCCCCAGTGGCCACCCTCAGACTaGAGTTCCCAGTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: LVHISWCTCMSFSRIYPQWPPSD*SSQWEM
Trigger: CATCTCCCACTGGGAACTGCAGTCTGAGGGTGGCCA...CTGGGGATAAATCCTAGAGAAACTCATACATGTACACCAGGAGATGTGTACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR GCA 90 bp GCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATAAGCTCAATGGCACCTTaGACCACATACTCGTTCTGT +
Preference number: 4 (lower is better)
Translates to: ASLPLVPVSSFWCIQQSISSMAP*TTYSFC
Trigger: ACAGAACGAGTATGTGGTGCAAGGTGCCATTGAGCT...TATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp TGCAGCACAGGCAATATCTGTCGCTCCTTCTTCCTTGACCGCTTAAAGATGTTGCCACCTGTACCTGGATaGTGTATTGATTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: CSTGNICRSFFLDRLKMLPPVPG*CIDWPG
Trigger: TCCTGGCCAATCAATACAGCATCCAGGTACAGGTGG...CAACATCTTTAAGCGGTCAAGGAAGAAGGAGCGACAGATATTGCCTGTGCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp CTTCCACCTGTACCTGGATGCTGTATTGATTGGCCAGGAGCTCAATGGCACCTTGTTTCCAGTTTCTGGTaGATCCAACAGAGTATACCC +
Preference number: 4 (lower is better)
Translates to: LPPVPGCCIDWPGAQWHLVSSFW*IQQSIP
Trigger: GGGTATACTCTGTTGGATGCACCAGAAACTGGAAAC...AAGGTGCCATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTACAGGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp GAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGCTTATTGCCGAAAACTaGAGAAAGACACGAACAGGA +
Preference number: 4 (lower is better)
Translates to: ESASLPLVPVSSFWCIQQLIAEN*RKTRTG
Trigger: TCCTGTTCGTGTCTTTCTGCAGTTTTCGGCAATAAG...CTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp AGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCCATGACACCCAGGCTGCCACTTTATTGGCCAAATaGTTCTCCTATGTTTACAAC +
Preference number: 4 (lower is better)
Translates to: RQQGGSIHQVVLHDTQAATLLAK*FSYVYN
Trigger: GTTGTAAACATAGGAGAAGCATTTGGCCAATAAAGT...GGCAGCCTGGGTGTCATGGAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp CTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGATTGAGCCTGTTGGCTaGTCAAGACTGGTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LMLHNWTAGQQIFYFLLPIEPVG*SRLVRW
Trigger: CCACCTGACCAGTCTTGAGCAGCCAACAGGCTCAAT...CGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR GCA 90 bp CTGCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGTCACCCTGGCTGGAGTaGAGTGGCACAAAACGGAGT +
Preference number: 4 (lower is better)
Translates to: LLMLHNWTAGQQIFYFLLSPWLE*SGTKRS
Trigger: ACTCCGTTTTGTGCCACTGCACTCCAGCCAGGGTGA...CAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR GCA 90 bp CTGAGATTACAGGCACCTGCCATCATGCCCTTTTGTACTTTTATAGAGATGGGGTCCCCATGGTCCTTATaGACATGTGGACTGCACTGC +
Preference number: 4 (lower is better)
Translates to: LRLQAPAIMPFCTFIEMGSPWSL*TCGLHC
Trigger: GCAGTGCAGTCCACATGTGCATAAGGACCATGGGGA...CCCCATCTCTATAAAAGTACAAAAGGGCATGATGGCAGGTGCCTGTAATCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR GCA 90 bp GGCTTCATTCACAAAATCCTTGGCACTCAGCTGCTCCAGCTTAGCACTTACATGTACAGCTGGGATTGGTaGTACAGCTGGAATCCTTGG +
Preference number: 4 (lower is better)
Translates to: GFIHKILGTQLLQLSTYMYSWDW*YSWNPW
Trigger: CCAAGGATTCCAGCTGTAGCACCAATCCCAGCTGTA...CATGTAAGTGCTAAGCTGGAGCAGCTGAGTGCCAAGGATTTTGTGAATGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR GCA 90 bp GGTCCTGGTTGCTGCAGCTGGGATGCTTGCTATAGCTGGCAATCTTGTTACTATTATGGTGAGGACTCTTaGTCTGTGACTTTTGCCTCG +
Preference number: 4 (lower is better)
Translates to: GPGCCSWDACYSWQSCYYYGEDS*SVTFAS
Trigger: CGAGGCAAAAGTCACAGAGCAAGAGTCCTCACCATA...ATAGTAACAAGATTGCCAGCTATAGCAAGCATCCCAGCTGCAGCAACCAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp ACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATTACTATCTATGCCTTaGTCTGGCCTAGATTTTTGG +
Preference number: 4 (lower is better)
Translates to: TGPRVHLCHWSQFPVSGALLSMP*SGLDFW
Trigger: CCAAAAATCTAGGCCAGAGCAAGGCATAGATAGTAA...TGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp GCAGAAGTACATGGGGCCAAAATTGGCCATGAGGTTTGGTATTACCAGCTCCCCGGAATTTGGGCTCTGTaGCAGCCCATTTCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: AEVHGAKIGHEVWYYQLPGIWAL*QPISSY
Trigger: ATAAGAAGAAATGGGCTGCCACAGAGCCCAAATTCC...GGGGAGCTGGTAATACCAAACCTCATGGCCAATTTTGGCCCCATGTACTTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CCA 90 bp CCATACTTCTGCTCTGAGAGGAGACTGACACGGATTGATGGCCAAAGATCTCCACATTCACAAAATCCTTaGCACTCAGCTGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PYFCSERRLTRIDGQRSPHSQNP*HSAAPA
Trigger: AGCTGGAGCAGCTGAGTGCCAAGGATTTTGTGAATG...TGGAGATCTTTGGCCATCAATCCGTGTCAGTCTCCTCTCAGAGCAGAAGTATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
CDS-3UTR CCA 90 bp CTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTGTTCCCAGTGGGAGATaGCTTCATTCACAAAATCCT +
Preference number: 4 (lower is better)
Translates to: LCHWSQFPVSGASNRVYPVPSGR*LHSQNP
Trigger: AGGATTTTGTGAATGAAGCCATCTCCCACTGGGAAC...AGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp CTTCAGGGATTGGGTGATACTATGTCAGCCTACGCATTTTGCAGAAGTACATGGACGGGGAGAGATCATTaGCAGCAAGATTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: LQGLGDTMSAYAFCRSTWTGRDH*QQDCLA
Trigger: TGCCAGGCAATCTTGCTGCCAATGATCTCTCCCCGT...CCATGTACTTCTGCAAAATGCGTAGGCTGACATAGTATCACCCAATCCCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CCA 90 bp GCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCAAGACACGAACAGGATaGAGACAGGACCGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: ADAPQLDSRTANLLLLIAKTRTG*RQDREC
Trigger: GCACTCTCGGTCCTGTCTCCATCCTGTTCGTGTCTT...GGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp GGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTATTCTTTGTGAGCCTGCTCACTaGCTTCTCCTTCTAAGCCCC +
Preference number: 4 (lower is better)
Translates to: GPSFQFLVHPTEYTLCILCEPAH*LLLLSP
Trigger: GGGGCTTAGAAGGAGAAGCCAGTGAGCAGGCTCACA...AAGAATACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp ACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAATCTGGCCTAGATTTTTaGTCTGGTCAGAACTTTTGC +
Preference number: 4 (lower is better)
Translates to: TESASLPLVPVSSFWCIQSGLDF*SGQNFC
Trigger: GCAAAAGTTCTGACCAGACCAAAAATCTAGGCCAGA...TTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp AGAAAGACACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTTGCCTGAGAAGAGAGTaGGAAGCCACAACAATTTTT +
Preference number: 4 (lower is better)
Translates to: RKTRTGWRQDRECISATGCLRRE*EATTIF
Trigger: AAAAATTGTTGTGGCTTCCCACTCTCTTCTCAGGCA...ACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTGTCTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CCA 90 bp GTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTAAGGGAGAGACATTTGTaGGGAGTATGTGACTGTCTT +
Preference number: 4 (lower is better)
Translates to: VHLCHWSQFPVSGASNRVRERHL*GVCDCL
Trigger: AAGACAGTCACATACTCCCCACAAATGTCTCTCCCT...TACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CCA 90 bp GTGAGTTGGAAACCTGCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTAAAGGAGAAGTCATGTaGGGGAAGAATGGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: VSWKPADAPQLDSRTANLKGEVM*GKNGQG
Trigger: CCCTTGCCCATTCTTCCCCCACATGACTTCTCCTTT...AAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGCAGGTTTCCAACTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537428.2
CDS-3UTR TCA 90 bp GCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGAAAACGCTCTGAGAGGAGACTaGCACGGATTGATGGCCAAA +
Preference number: 4 (lower is better)
Translates to: APQLDSRTANLLLLIAENALRGD*HGLMAK
Trigger: TTTGGCCATCAATCCGTGTCAGTCTCCTCTCAGAGC...GTTTTCGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp AGGGATTGGGTGATACTATGTCAGCCTACGCATTTTGCAGAAGTACATGGGGCCAGCTTAGCACTTACATaGTCCCAGGCAGCAAAGTTA +
Preference number: 4 (lower is better)
Translates to: RDWVILCQPTHFAEVHGASLALT*SQAAKL
Trigger: TAACTTTGCTGCCTGGGATCATGTAAGTGCTAAGCT...GGCCCCATGTACTTCTGCAAAATGCGTAGGCTGACATAGTATCACCCAATCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307089.7
ENST00000498008.5
CDS-3UTR TCA 90 bp GCAGTATTGTTGACAGCAGGAATGGCCAGAATTATTCAGCTCAGAGGGTTTTTCCCCCTCTGTCAAAAGTaGAGCATCGAAGGTTCGGAC +
Preference number: 4 (lower is better)
Translates to: AVLLTAGMARIIQLRGFFPLCQK*SIEGSD
Trigger: GTCCGAACCTTCGATGCTTCACTTTTGACAGAGGGG...GAAAAACCCTCTGAGCTGAATAATTCTGGCCATTCCTGCTGTCAACAATACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR TCA 90 bp CCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTACTTGATTTCCATCCCTaGTCTCTTCAGGCACATAGC +
Preference number: 4 (lower is better)
Translates to: PLVPVSSFWCIQQSIPFVLDFHP*SLQAHS
Trigger: GCTATGTGCCTGAAGAGATCAGGGATGGAAATCAAG...TACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp CTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGACCAGCTCCCCAACCTaGCAGGATGAGAAGAAACAA +
Preference number: 4 (lower is better)
Translates to: LMLHNWTAGQQIFYFLLPTSSPT*QDEKKQ
Trigger: TTGTTTCTTCTCATCCTGTCAGGTTGGGGAGCTGGT...CGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp GTGAGTTGGAAACCTGCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTGGCCAAAATTGGCCATaGGGTTTGGTATTACCAGCT +
Preference number: 4 (lower is better)
Translates to: VSWKPADAPQLDSRTANLGQNWP*GLVLPA
Trigger: AGCTGGTAATACCAAACCTCATGGCCAATTTTGGCC...AAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGCAGGTTTCCAACTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp TGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTATTCTGCTTCAGGGATTGGGTaGTACTATGTCAGCCTACGC +
Preference number: 4 (lower is better)
Translates to: WSQFPVSGASNRVYPLYSASGIG*YYVSLR
Trigger: GCGTAGGCTGACATAGTATCACCCAATCCCTGAAGC...AGAATACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp GCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGAAAACGCTTCAGGGATTGGGTaGTACTATGTCAGCCTACGC +
Preference number: 4 (lower is better)
Translates to: APQLDSRTANLLLLIAENASGIG*YYVSLR
Trigger: GCGTAGGCTGACATAGTATCACCCAATCCCTGAAGC...GTTTTCGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp AACTCGAACTTGATTTCCATCCCTGATCTCTTCAGGCACATAGCTGTGAAGGATGGGCAGCAGTATTGTTaGCAGCAGGAATGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: NSNLISIPDLFRHIAVKDGQQYC*QQEWPE
Trigger: TTCTGGCCATTCCTGCTGTCAACAATACTGCTGCCC...ATCCTTCACAGCTATGTGCCTGAAGAGATCAGGGATGGAAATCAAGTTCGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR TCA 90 bp TCTTCTACTTCTTATTGCCGAAAACTGCAGAAAGACACGAACAGGATGGAGACAACACAGTGTGTGCAGTaGAGCCCTGTGATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SSTSYCRKLQKDTNRMETTQCVQ*SPVMLR
Trigger: CCTCAGCATCACAGGGCTTCACTGCACACACTGTGT...TGTCTCCATCCTGTTCGTGTCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR TCA 90 bp GATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGAAGCTGGAATCCTTGGATaGAGGCAAAGGGCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: DAPQLDSRTANLLLLIAEAGILG*RQRAAV
Trigger: TACAGCTGCCCTTTGCCTTCATCCAAGGATTCCAGC...TTCGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp ATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGAAACTCTTGCTCCAGCTCTaGCTTCTGCCATCATGGGGA +
Preference number: 4 (lower is better)
Translates to: MLHNWTAGQQIFYFLLPKLLLQL*LLPSWG
Trigger: TCCCCATGATGGCAGAAGTCAGAGCTGGAGCAAGAG...TTTCGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp AGAAAGACACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTAATTTGAAGGAGTTGTaGTGTATGGCTGCATACAAG +
Preference number: 4 (lower is better)
Translates to: RKTRTGWRQDRECISATGNLKEL*CMAAYK
Trigger: CTTGTATGCAGCCATACATCACAACTCCTTCAAATT...ACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTGTCTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR GCA 90 bp CTTGTACACATCTCCTGGTGTACATGTATGAGTTTCTCTAGGATTTATCCCCAGCATTGGCAGCAAGATTaGCTGGCAGGAGGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: LVHISWCTCMSFSRIYPQHWQQD*LAGGKR
Trigger: TCGCTTCCCTCCTGCCAGGCAATCTTGCTGCCAATG...CTGGGGATAAATCCTAGAGAAACTCATACATGTACACCAGGAGATGTGTACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR GCA 90 bp ATCATGATCTATGTGAGGCATCCATCCTGGTTTTGGAAGAGCTCAAATCAGAAGCCAGCCGCAAGAAGCTaGACTTGCAGCACAGGCAAT +
Preference number: 4 (lower is better)
Translates to: IMIYVRHPSWFWKSSNQKPAARS*TCSTGN
Trigger: ATTGCCTGTGCTGCAAGTGCAGCTTCTTGCGGCTGG...CTTCTGATTTGAGCTCTTCCAAAACCAGGATGGATGCCTCACATAGATCATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR GCA 90 bp GAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGTACCCTTTGTATTCTTaGTTCAGGGATTGGGTGATA +
Preference number: 4 (lower is better)
Translates to: ESASLPLVPVSSFWCIQQYPLYS*FRDWVI
Trigger: TATCACCCAATCCCTGAAGCAAGAATACAAAGGGTA...CTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp TCTTCTACTTCTTATTGCCGAAAACTGCAGAAAGACACGAACAGGATGGAGACACCGAGAGTGCATCTCTaGCACTGGTCCCAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: SSTSYCRKLQKDTNRMETPRVHL*HWSQFP
Trigger: TGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGG...TGTCTCCATCCTGTTCGTGTCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp ATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGAAACCGAGAGTGCATCTCTaGCACTGGTCCCAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: MLHNWTAGQQIFYFLLPKPRVHL*HWSQFP
Trigger: TGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGG...TTTCGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp AGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGTCTTCTACTTCTTATTaGCGAAAACTGCAGAAAGAC +
Preference number: 4 (lower is better)
Translates to: RQDRECISATGPSFQFLVSSTSY*RKLQKD
Trigger: GTCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGA...CACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp CAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTACTTTATTGGCCAAATaGTTCTCCTATGTTTACAAC +
Preference number: 4 (lower is better)
Translates to: QDGDRTESASLPLVPVSSTLLAK*FSYVYN
Trigger: GTTGTAAACATAGGAGAAGCATTTGGCCAATAAAGT...ACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp TGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTATTCTCATGAAGTCCCCAACTaGAGCCCCAGGTCTATAGAG +
Preference number: 4 (lower is better)
Translates to: WSQFPVSGASNRVYPLYSHEVPN*SPRSIE
Trigger: CTCTATAGACCTGGGGCTGCAGTTGGGGACTTCATG...AGAATACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR GCA 90 bp TCTTCTACTTCTTATTGCCGAAAACTGCAGAAAGACACGAACAGGATGGAGACAGTCGGTCCTGGTTGCTaGAGCTGGGATGCTTGCTAT +
Preference number: 4 (lower is better)
Translates to: SSTSYCRKLQKDTNRMETVGPGC*SWDACY
Trigger: ATAGCAAGCATCCCAGCTGCAGCAACCAGGACCGAC...TGTCTCCATCCTGTTCGTGTCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp TTTGCAGAAGTACATGGGGCCAAAATTGGCCATGAGGTTTGGTATTACCAGCTCTTGCTCTGTGACTTTTaGCTCGCTGGGACTCTTGCT +
Preference number: 4 (lower is better)
Translates to: FAEVHGAKIGHEVWYYQLLLCDF*LAGTLA
Trigger: AGCAAGAGTCCCAGCGAGGCAAAAGTCACAGAGCAA...GAGCTGGTAATACCAAACCTCATGGCCAATTTTGGCCCCATGTACTTCTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp TGGAAACCTGCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTGTTCATTATAGCTTCTaGGGGGAAGTGACTGGGGTG +
Preference number: 4 (lower is better)
Translates to: WKPADAPQLDSRTANLLLVHYSF*GEVTGV
Trigger: CACCCCAGTCACTTCCCCGCAGAAGCTATAATGAAC...AAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGCAGGTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CCA 90 bp AGTGCACCATACTTCTGCTCTGAGAGGAGACTGACACGGATTGATGGCCAAAGAGTTCCCAGTGGGAGATaGCTTCATTCACAAAATCCT +
Preference number: 4 (lower is better)
Translates to: SAPYFCSERRLTRIDGQRVPSGR*LHSQNP
Trigger: AGGATTTTGTGAATGAAGCCATCTCCCACTGGGAAC...TCTTTGGCCATCAATCCGTGTCAGTCTCCTCTCAGAGCAGAAGTATGGTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
CDS-3UTR CCA 90 bp GTGAGTTGGAAACCTGCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTATTGGCCATGAGGTTTaGTATTACCAGCTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: VSWKPADAPQLDSRTANLIGHEV*YYQLPN
Trigger: GTTGGGGAGCTGGTAATACCAAACCTCATGGCCAAT...AAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGCAGGTTTCCAACTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp CACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTTTCAACAACTTTATTaGCCAAATGCTTCTCCTATG +
Preference number: 4 (lower is better)
Translates to: HEQDGDRTESASLPLVPVFQQLY*PNASPM
Trigger: CATAGGAGAAGCATTTGGCCAATAAAGTTGTTGAAA...AACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp TGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTATTCTACGGGGAGAGATCATTaGCAGCAAGATTGCGGCAAC +
Preference number: 4 (lower is better)
Translates to: WSQFPVSGASNRVYPLYSTGRDH*QQDCGN
Trigger: GTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGT...AGAATACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp GTGAGTTGGAAACCTGCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTGATTGGTGCTACAGCTaGAATCCTTGGATGAAGGCA +
Preference number: 4 (lower is better)
Translates to: VSWKPADAPQLDSRTANLDWCYS*NPWMKA
Trigger: TGCCTTCATCCAAGGATTCCAGCTGTAGCACCAATC...AAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGCAGGTTTCCAACTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp CGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACATCGCTGTCACTACTCTaGCATTTGCTAATAATAGTC +
Preference number: 4 (lower is better)
Translates to: RECISATGPSFQFLVHPTSLSLL*HLLIIV
Trigger: GACTATTATTAGCAAATGCCAGAGTAGTGACAGCGA...TGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp GCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGAGACTGACACGGATTaGTGGCCAAAGATCTCCAAA +
Preference number: 4 (lower is better)
Translates to: ADAPQLDSRTANLLLLIAETDTD*WPKISK
Trigger: TTTGGAGATCTTTGGCCATCAATCCGTGTCAGTCTC...GGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp GTGAGTTGGAAACCTGCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTGAGGTAACTCGAACTTaGTTTCCATCCCTGATCTCT +
Preference number: 4 (lower is better)
Translates to: VSWKPADAPQLDSRTANLEVTRT*FPSLIS
Trigger: AGAGATCAGGGATGGAAATCAAGTTCGAGTTACCTC...AAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGCAGGTTTCCAACTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp CTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGGTAGGGGTTAATGAGTaGGTTGGAAACCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: LMLHNWTAGQQIFYFLLPVGVNE*VGNLLM
Trigger: CATCAGCAGGTTTCCAACTCACTCATTAACCCCTAC...CGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp TTTGCAGAAGTACATGGGGCCAAAATTGGCCATGAGGTTTGGTATTACCAGCTCAATGAAGACTTCAGATaGGGAGTGCACAAGTCGGTC +
Preference number: 4 (lower is better)
Translates to: FAEVHGAKIGHEVWYYQLNEDFR*GVHKSV
Trigger: GACCGACTTGTGCACTCCTCATCTGAAGTCTTCATT...GAGCTGGTAATACCAAACCTCATGGCCAATTTTGGCCCCATGTACTTCTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp TGCAGCACAGGCAATATCTGTCGCTCCTTCTTCCTTGACCGCTTAAAGATGTTGCATTTCTTGTTATGGTaGGGACTCTTGCTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: CSTGNICRSFFLDRLKMLHFLLW*GLLLCD
Trigger: GTCACAGAGCAAGAGTCCTCACCATAACAAGAAATG...CAACATCTTTAAGCGGTCAAGGAAGAAGGAGCGACAGATATTGCCTGTGCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp TTCCTAGCTTCACCTGATTTTGAGTCTCAGAGATCTTCCAGGGCCCTCAATTACGCAAGAAGCTGCACTTaGAGCACAGGCAATATCTGT +
Preference number: 4 (lower is better)
Translates to: FLASPDFESQRSSRALNYARSCT*STGNIC
Trigger: ACAGATATTGCCTGTGCTGCAAGTGCAGCTTCTTGC...GTAATTGAGGGCCCTGGAAGATCTCTGAGACTCAAAATCAGGTGAAGCTAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR GCA 90 bp TCTCCTTCTAAGCCCCTAAGCGGGCAGCAAACTTTAGTACAGGCCTGGAGATGGTCTTCTACTTCTTATTaGCGAAAACTGCAGAAAGAC +
Preference number: 4 (lower is better)
Translates to: SPSKPLSGQQTLVQAWRWSSTSY*RKLQKD
Trigger: GTCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGA...CCATCTCCAGGCCTGTACTAAAGTTTGCTGCCCGCTTAGGGGCTTAGAAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp ATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTTCTTCTACTTCTTATTaGCGAAAACTGCAGAAAGAC +
Preference number: 4 (lower is better)
Translates to: METGPRVHLCHWSQFPVSSSTSY*RKLQKD
Trigger: GTCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGA...AGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp CCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTAGCAGGGCTTTTATGTTaGTCTGGCCATGTAATCAAG +
Preference number: 4 (lower is better)
Translates to: PLVPVSSFWCIQQSIPFVAGLLC*SGHVIK
Trigger: CTTGATTACATGGCCAGAGCAACATAAAAGCCCTGC...TACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CCA 90 bp TCTTCTACTTCTTATTGCCGAAAACTGCAGAAAGACACGAACAGGATGGAGACATGGCCAGGAGCTCAATaGCACCTTGCACCACATACT +
Preference number: 4 (lower is better)
Translates to: SSTSYCRKLQKDTNRMETWPGAQ*HLAPHT
Trigger: AGTATGTGGTGCAAGGTGCCATTGAGCTCCTGGCCA...TGTCTCCATCCTGTTCGTGTCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp ATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGAAATGGCCAGGAGCTCAATaGCACCTTGCACCACATACT +
Preference number: 4 (lower is better)
Translates to: MLHNWTAGQQIFYFLLPKWPGAQ*HLAPHT
Trigger: AGTATGTGGTGCAAGGTGCCATTGAGCTCCTGGCCA...TTTCGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp GATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGAAGGATGCTGTATTGATTaGCCAGGAGCTCAATGGCAC +
Preference number: 4 (lower is better)
Translates to: DAPQLDSRTANLLLLIAEGCCID*PGAQWH
Trigger: GTGCCATTGAGCTCCTGGCCAATCAATACAGCATCC...TTCGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp ATCATGATCTATGTGAGGCATCCATCCTGGTTTTGGAAGAGCTCAAATCAGAAGAAGACACGAACAGGATaGAGACAGGACCGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: IMIYVRHPSWFWKSSNQKKTRTG*RQDREC
Trigger: GCACTCTCGGTCCTGTCTCCATCCTGTTCGTGTCTT...CTTCTGATTTGAGCTCTTCCAAAACCAGGATGGATGCCTCACATAGATCATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CCA 90 bp GCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCCAATTAGCACTAGGCTaGATATCCAGGAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: ADAPQLDSRTANLLLLIAQLALG*ISRSPR
Trigger: CCTTGGACTCCTGGATATCCAGCCTAGTGCTAATTG...GGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CCA 90 bp TCTTCTACTTCTTATTGCCGAAAACTGCAGAAAGACACGAACAGGATGGAGACAAGACCCCAGAAAGGTTaGATAAGGAGGGCCCACAGA +
Preference number: 4 (lower is better)
Translates to: SSTSYCRKLQKDTNRMETRPQKG*IRRAHR
Trigger: TCTGTGGGCCCTCCTTATCCAACCTTTCTGGGGTCT...TGTCTCCATCCTGTTCGTGTCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp AACTCGAACTTGATTTCCATCCCTGATCTCTTCAGGCACATAGCTGTGAAGGATTACAGCTGGAATCCTTaGATGAAGGCAAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: NSNLISIPDLFRHIAVKDYSWNP*MKAKGS
Trigger: GCTGCCCTTTGCCTTCATCCAAGGATTCCAGCTGTA...ATCCTTCACAGCTATGTGCCTGAAGAGATCAGGGATGGAAATCAAGTTCGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp TGGAAACCTGCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTAACTACAGCTGGGATTaGTGCTACAGCTGGAATCCT +
Preference number: 4 (lower is better)
Translates to: WKPADAPQLDSRTANLLLNYSWD*CYSWNP
Trigger: AGGATTCCAGCTGTAGCACCAATCCCAGCTGTAGTT...AAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGCAGGTTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp AGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGATCAGAACTTTTGCTCTaGCCCTCATTTCTTGTTATG +
Preference number: 4 (lower is better)
Translates to: RVHLCHWSQFPVSGASNRSELLL*PSFLVM
Trigger: CATAACAAGAAATGAGGGCCAGAGCAAAAGTTCTGA...TCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp CCATACTTCTGCTCTGAGAGGAGACTGACACGGATTGATGGCCAAAGATCTCCACCTAGATTTTTGGTCTaGTCAGAACTTTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PYFCSERRLTRIDGQRSPPRFLV*SELLLW
Trigger: CCAGAGCAAAAGTTCTGACCAGACCAAAAATCTAGG...TGGAGATCTTTGGCCATCAATCCGTGTCAGTCTCCTCTCAGAGCAGAAGTATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp GCAGTATTGTTGACAGCAGGAATGGCCAGAATTATTCAGCTCAGAGGGTTTTTCGAGACTGACACGGATTaGTGGCCAAAGATCTCCAAA +
Preference number: 4 (lower is better)
Translates to: AVLLTAGMARIIQLRGFFETDTD*WPKISK
Trigger: TTTGGAGATCTTTGGCCATCAATCCGTGTCAGTCTC...GAAAAACCCTCTGAGCTGAATAATTCTGGCCATTCCTGCTGTCAACAATACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR TCA 90 bp CTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGAGCTTAGCACTTACATaGTCCCAGGCAGCAAAGTTA +
Preference number: 4 (lower is better)
Translates to: LMLHNWTAGQQIFYFLLPSLALT*SQAAKL
Trigger: TAACTTTGCTGCCTGGGATCATGTAAGTGCTAAGCT...CGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp TGGAAACCTGCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTTTTCCTGCCATCCCATaGGGTAACTCGAACTTGATT +
Preference number: 4 (lower is better)
Translates to: WKPADAPQLDSRTANLLLFPAIP*GNSNLI
Trigger: AATCAAGTTCGAGTTACCTCATGGGATGGCAGGAAA...AAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGCAGGTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp CACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTATTTTCCTGCCATCCCATaGGGTAACTCGAACTTGATT +
Preference number: 4 (lower is better)
Translates to: HWSQFPVSGASNRVYPLYFPAIP*GNSNLI
Trigger: AATCAAGTTCGAGTTACCTCATGGGATGGCAGGAAA...ATACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp AGCACTTACATGATCCCAGGCAGCAAAGTTATTGACCAGTGCACCATACTTCTGTCGCTCCTTCTTCCTTaGCCGCTTAAAGATGTTGTT +
Preference number: 4 (lower is better)
Translates to: STYMIPGSKVIDQCTILLSLLLP*PLKDVV
Trigger: AACAACATCTTTAAGCGGTCAAGGAAGAAGGAGCGA...CAGAAGTATGGTGCACTGGTCAATAACTTTGCTGCCTGGGATCATGTAAGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486270.5
ENST00000498008.5
CDS-3UTR TCA 90 bp GTGAGTTGGAAACCTGCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTAACAAAATGTGTCCATaGAAACCCTTCGGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: VSWKPADAPQLDSRTANLNKMCP*KPFGSE
Trigger: CTCACTTCCGAAGGGTTTTCATGGACACATTTTGTT...AAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGCAGGTTTCCAACTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp TGGAAACCTGCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCCCAACCTGACAGGATaGGAAGAAACAAAATGTGTC +
Preference number: 4 (lower is better)
Translates to: WKPADAPQLDSRTANLLLPNLTG*EETKCV
Trigger: GACACATTTTGTTTCTTCTCATCCTGTCAGGTTGGG...AAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGCAGGTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp AACTTGATTTCCATCCCTGATCTCTTCAGGCACATAGCTGTGAAGGATCTTCTGGGCCAAAATTGGCCATaGGGTTTGGTATTACCAGCT +
Preference number: 4 (lower is better)
Translates to: NLISIPDLFRHIAVKDLLGQNWP*GLVLPA
Trigger: AGCTGGTAATACCAAACCTCATGGCCAATTTTGGCC...CAGAAGATCCTTCACAGCTATGTGCCTGAAGAGATCAGGGATGGAAATCAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp CCCTCCTCAACTGACACCTCTAATACCCAAATAAGGATGAGCAGGAAAGACAGAGGAACTAATGGCATTTaGACTGACATGAAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: PSSTDTSNTQIRMSRKDRGTNGI*TDMKSP
Trigger: TGGGGACTTCATGTCAGTGCAAATGCCATTAGTTCC...TCTGTCTTTCCTGCTCATCCTTATTTGGGTATTAGAGGTGTCAGTTGAGGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR GCA 90 bp GATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGAAGGACTCTCACCCTGGTaGTCATTTATGCTAAGTTGG +
Preference number: 4 (lower is better)
Translates to: DAPQLDSRTANLLLLIAEGLSPW*SFMLSW
Trigger: CCAACTTAGCATAAATGAGCACCAGGGTGAGAGTCC...TTCGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp CTTCAGGGATTGGGTGATACTATGTCAGCCTACGCATTTTGCAGAAGTACATGGGTTGTGATGTATGGCTaGATACAAGAAGGACCAGAG +
Preference number: 4 (lower is better)
Translates to: LQGLGDTMSAYAFCRSTWVVMYG*IQEGPE
Trigger: CTCTGGTCCTTCTTGTATGCAGCCATACATCACAAC...CCATGTACTTCTGCAAAATGCGTAGGCTGACATAGTATCACCCAATCCCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CCA 90 bp AACTCGAACTTGATTTCCATCCCTGATCTCTTCAGGCACATAGCTGTGAAGGATCATTCACAAAATCCTTaGCACTCAGCTGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: NSNLISIPDLFRHIAVKDHSQNP*HSAAPA
Trigger: AGCTGGAGCAGCTGAGTGCCAAGGATTTTGTGAATG...ATCCTTCACAGCTATGTGCCTGAAGAGATCAGGGATGGAAATCAAGTTCGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000486270.5
ENST00000498008.5
CDS-3UTR CCA 90 bp GTCCCCAACTGCAGCCCCAGGTCTATAGAGTTTCAACAACTTTATTGGCCAAATCTCCTAAGCCACATTTaGGCAGCAGTATTGTTGACA +
Preference number: 4 (lower is better)
Translates to: VPNCSPRSIEFQQLYWPNLLSHI*AAVLLT
Trigger: TGTCAACAATACTGCTGCCCAAATGTGGCTTAGGAG...ATTTGGCCAATAAAGTTGTTGAAACTCTATAGACCTGGGGCTGCAGTTGGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CCA 90 bp CACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTATGTCATACACGAGGTCTaGGAATACCTGCTAGATGAA +
Preference number: 4 (lower is better)
Translates to: HWSQFPVSGASNRVYPLYVIHEV*EYLLDE
Trigger: TTCATCTAGCAGGTATTCCCAGACCTCGTGTATGAC...ATACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CCA 90 bp GTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTAATTTATCCCCAGTATTaGATTAACTGGGTTATAGGG +
Preference number: 4 (lower is better)
Translates to: VHLCHWSQFPVSGASNRVIYPQY*INWVIG
Trigger: CCCTATAACCCAGTTAATCCAATACTGGGGATAAAT...TACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CCA 90 bp GGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTATTCTTTGGGGACTCTCACCCTaGTGCTCATTTATGCTAAGT +
Preference number: 4 (lower is better)
Translates to: GPSFQFLVHPTEYTLCILWGLSP*CSFMLS
Trigger: ACTTAGCATAAATGAGCACCAGGGTGAGAGTCCCCA...AAGAATACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR CAA 72 bp AATCATCATGATCTATGTGAGGCATCCATCCTGGTTTaGGAAGAGCTCAAATCAGAAGTTCCCAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: NHHDLCEASILV*EELKSEVPSRA
Trigger: AGCCCTGCTGGGAACTTCTGATTTGAGCTCTTCCAAAACCAGGATGGATGCCTCACATAGATCATGATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
3UTR CAA 72 bp TTGCTCTGGCCTAGATTTTTGGTCTGGTCAGAACTTTaGCTCTGGCCCTCATTTCTTGTTATGGTGAGGACT +
Preference number: 4 (lower is better)
Translates to: LLWPRFLVWSEL*LWPSFLVMVRT
Trigger: AGTCCTCACCATAACAAGAAATGAGGGCCAGAGCAAAAGTTCTGACCAGACCAAAAATCTAGGCCAGAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp AACAGAGTATACCCTTTGTATTCTTGCTTCAGGGATTGGGTGATACTATGTCAGACCATACTTCTGCTCTaGGAGGAGACTGACACGGAT +
Preference number: 4 (lower is better)
Translates to: NRVYPLYSCFRDWVILCQTILLL*EETDTD
Trigger: ATCCGTGTCAGTCTCCTCTCAGAGCAGAAGTATGGT...CTGACATAGTATCACCCAATCCCTGAAGCAAGAATACAAAGGGTATACTCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp GCAGTATTGTTGACAGCAGGAATGGCCAGAATTATTCAGCTCAGAGGGTTTTTCAGGCAGCAAAGTTATTaGCCAGTGCACCATACTTCT +
Preference number: 4 (lower is better)
Translates to: AVLLTAGMARIIQLRGFFRQQSY*PVHHTS
Trigger: AGAAGTATGGTGCACTGGTCAATAACTTTGCTGCCT...GAAAAACCCTCTGAGCTGAATAATTCTGGCCATTCCTGCTGTCAACAATACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR TCA 90 bp AACTTGATTTCCATCCCTGATCTCTTCAGGCACATAGCTGTGAAGGATCTTCTGGAGGTAACTCGAACTTaGTTTCCATCCCTGATCTCT +
Preference number: 4 (lower is better)
Translates to: NLISIPDLFRHIAVKDLLEVTRT*FPSLIS
Trigger: AGAGATCAGGGATGGAAATCAAGTTCGAGTTACCTC...CAGAAGATCCTTCACAGCTATGTGCCTGAAGAGATCAGGGATGGAAATCAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp CTGCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGGAGGTAACTCGAACTTaGTTTCCATCCCTGATCTCT +
Preference number: 4 (lower is better)
Translates to: LLMLHNWTAGQQIFYFLLEVTRT*FPSLIS
Trigger: AGAGATCAGGGATGGAAATCAAGTTCGAGTTACCTC...CAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp GGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTATTCTTGAGGTAACTCGAACTTaGTTTCCATCCCTGATCTCT +
Preference number: 4 (lower is better)
Translates to: GPSFQFLVHPTEYTLCILEVTRT*FPSLIS
Trigger: AGAGATCAGGGATGGAAATCAAGTTCGAGTTACCTC...AAGAATACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp TGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTATTCTTCGCTCCTTCTTCCTTaGCCGCTTAAAGATGTTGTT +
Preference number: 4 (lower is better)
Translates to: WSQFPVSGASNRVYPLYSSLLLP*PLKDVV
Trigger: AACAACATCTTTAAGCGGTCAAGGAAGAAGGAGCGA...AGAATACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp GTGAATAGGGTTGCTATGAATATTCTTGTACACATCTCCTGGTGTACATGTATGAACTCACTTCAAGGGTaGCAGGGGCTCAGTAACTGG +
Preference number: 4 (lower is better)
Translates to: VNRVAMNILVHISWCTCMNSLQG*QGLSNW
Trigger: CCAGTTACTGAGCCCCTGTCACCCTTGAAGTGAGTT...CATACATGTACACCAGGAGATGTGTACAAGAATATTCATAGCAACCCTATTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR TCA 90 bp GATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGAAAAGTACTATACAGAGTaGACAGCATGCAGGGACCAT +
Preference number: 4 (lower is better)
Translates to: DAPQLDSRTANLLLLIAEKYYTE*TACRDH
Trigger: ATGGTCCCTGCATGCTGTTCACTCTGTATAGTACTT...TTCGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR TCA 90 bp CTATGTGAGGCATCCATCCTGGTTTTGGAAGAGCTCAAATCAGAAGTTCCCAGCCCTGGTGTACATGTATaGGTTTCTCTAGGATTTATC +
Preference number: 4 (lower is better)
Translates to: LCEASILVLEELKSEVPSPGVHV*VSLGFI
Trigger: GATAAATCCTAGAGAAACTCATACATGTACACCAGG...GCTGGGAACTTCTGATTTGAGCTCTTCCAAAACCAGGATGGATGCCTCACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR GCA 90 bp TGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTATTCTGTTTCCAGTTTCTGGTaGATCCAACAGAGTATACCC +
Preference number: 4 (lower is better)
Translates to: WSQFPVSGASNRVYPLYSVSSFW*IQQSIP
Trigger: GGGTATACTCTGTTGGATGCACCAGAAACTGGAAAC...AGAATACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp TCTTCTACTTCTTATTGCCGAAAACTGCAGAAAGACACGAACAGGATGGAGACATCTGACTTGGACTTCTaGTCAGATGATGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: SSTSYCRKLQKDTNRMETSDLDF*SDDASC
Trigger: GCAAGAGGCATCATCTGAGCAGAAGTCCAAGTCAGA...TGTCTCCATCCTGTTCGTGTCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp AGCAGTATTGTTGACAGCAGGAATGGCCAGAATTATTCAGCTCAGAGGGTTTTTAGTATGACGGTTTTGTaGCAGAAGCAGCCTCCTAAG +
Preference number: 4 (lower is better)
Translates to: SSIVDSRNGQNYSAQRVFSMTVL*QKQPPK
Trigger: CTTAGGAGGCTGCTTCTGCCACAAAACCGTCATACT...AAAAACCCTCTGAGCTGAATAATTCTGGCCATTCCTGCTGTCAACAATACTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CCA 90 bp CCCTCCTCAACTGACACCTCTAATACCCAAATAAGGATGAGCAGGAAAGACAGACATCCATCCTGGTTTTaGAAGAGCTCAAATCAGAAG +
Preference number: 4 (lower is better)
Translates to: PSSTDTSNTQIRMSRKDRHPSWF*KSSNQK
Trigger: CTTCTGATTTGAGCTCTTCCAAAACCAGGATGGATG...TCTGTCTTTCCTGCTCATCCTTATTTGGGTATTAGAGGTGTCAGTTGAGGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CCA 90 bp CTGCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGTCTGAGCATAACTATTaGCCGAGACAGGATCACAAG +
Preference number: 4 (lower is better)
Translates to: LLMLHNWTAGQQIFYFLLSEHNY*PRQDHK
Trigger: CTTGTGATCCTGTCTCGGCCAATAGTTATGCTCAGA...CAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498008.5
3UTR CAA 72 bp TTCTGGTGCATCCAACAGAGTATACCCTTTGTATTCTaGCTTCAGGGATTGGGTGATACTATGTCAGCCTAC +
Preference number: 4 (lower is better)
Translates to: FWCIQQSIPFVF*LQGLGDTMSAY
Trigger: GTAGGCTGACATAGTATCACCCAATCCCTGAAGCAAGAATACAAAGGGTATACTCTGTTGGATGCACCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp TCTTCTACTTCTTATTGCCGAAAACTGCAGAAAGACACGAACAGGATGGAGACAAGCTTAGCACTTACATaGTCCCAGGCAGCAAAGTTA +
Preference number: 4 (lower is better)
Translates to: SSTSYCRKLQKDTNRMETSLALT*SQAAKL
Trigger: TAACTTTGCTGCCTGGGATCATGTAAGTGCTAAGCT...TGTCTCCATCCTGTTCGTGTCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp TGGAAACCTGCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTTACCCTTTGTATTCTTaGTTCAGGGATTGGGTGATA +
Preference number: 4 (lower is better)
Translates to: WKPADAPQLDSRTANLLLYPLYS*FRDWVI
Trigger: TATCACCCAATCCCTGAAGCAAGAATACAAAGGGTA...AAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGCAGGTTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp CATAGCTGTGAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATACTTTATTGGCCAAATaGTTCTCCTATGTTTACAAC +
Preference number: 4 (lower is better)
Translates to: HSCEGSSVVWLFGTGRDHTLLAK*FSYVYN
Trigger: GTTGTAAACATAGGAGAAGCATTTGGCCAATAAAGT...ATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTCACAGCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp CCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTATCCAAAGTAGTTCTCTaGTTTTCTTATCTAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PLVPVSSFWCIQQSIPFVSKVVL*FSYLGL
Trigger: CAGACCTAGATAAGAAAAGCAGAGAACTACTTTGGA...TACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR GCA 90 bp CTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGTTAGAAAGGGCATCATaGTACATTTACTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LMLHNWTAGQQIFYFLLPLERAS*YIYSSG
Trigger: CCCAGAAGAGTAAATGTAGCATGATGCCCTTTCTAA...CGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR GCA 90 bp AACAGAGTATACCCTTTGTATTCTTGCTTCAGGGATTGGGTGATACTATGTCAGTATGCACATGTGGACTaGACTGCAAAGTGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: NRVYPLYSCFRDWVILCQYAHVD*TAKCLW
Trigger: CCAAAGGCACTTTGCAGTGCAGTCCACATGTGCATA...CTGACATAGTATCACCCAATCCCTGAAGCAAGAATACAAAGGGTATACTCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CCA 90 bp GCAGTATTGTTGACAGCAGGAATGGCCAGAATTATTCAGCTCAGAGGGTTTTTCCCAGTTTCCAGTTTCTaGTGCATCCAACAGAGTATA +
Preference number: 4 (lower is better)
Translates to: AVLLTAGMARIIQLRGFFPVSSF*CIQQSI
Trigger: TATACTCTGTTGGATGCACCAGAAACTGGAAACTGG...GAAAAACCCTCTGAGCTGAATAATTCTGGCCATTCCTGCTGTCAACAATACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CCA 90 bp CATAGCTGTGAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATTTTCAACAACTTTATTaGCCAAATGCTTCTCCTATG +
Preference number: 4 (lower is better)
Translates to: HSCEGSSVVWLFGTGRDHFQQLY*PNASPM
Trigger: CATAGGAGAAGCATTTGGCCAATAAAGTTGTTGAAA...ATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTCACAGCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp GCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGAAAACCCAGACATACGTAACTaGTTAGACCAGCTGCAAATA +
Preference number: 4 (lower is better)
Translates to: APQLDSRTANLLLLIAENPDIRN*LDQLQI
Trigger: TATTTGCAGCTGGTCTAACCAGTTACGTATGTCTGG...GTTTTCGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CCA 90 bp GTATTCTTGCTTCAGGGATTGGGTGATACTATGTCAGCCTACGCATTTTGCAGACCTAGATTTTTGGTCTaGTCAGAACTTTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: VFLLQGLGDTMSAYAFCRPRFLV*SELLLW
Trigger: CCAGAGCAAAAGTTCTGACCAGACCAAAAATCTAGG...TCTGCAAAATGCGTAGGCTGACATAGTATCACCCAATCCCTGAAGCAAGAATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp ATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGAAAATCTATGCCTTGCTCTaGCCTAGATTTTTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: MLHNWTAGQQIFYFLLPKIYALL*PRFLVW
Trigger: CCAGACCAAAAATCTAGGCCAGAGCAAGGCATAGAT...TTTCGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
3UTR CAA 72 bp CAACAGAGTATACCCTTTGTATTCTTGCTTCAGGGATaGGGTGATACTATGTCAGCCTACGCATTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: QQSIPFVFLLQG*GDTMSAYAFCR
Trigger: TCTGCAAAATGCGTAGGCTGACATAGTATCACCCAATCCCTGAAGCAAGAATACAAAGGGTATACTCTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp AAATCTTCTACTTCTTATTGCCGAAAACTGCAGAAAGACACGAACAGGATGGAGTTTCCTGCCATCCCATaGGGTAACTCGAACTTGATT +
Preference number: 4 (lower is better)
Translates to: KSSTSYCRKLQKDTNRMEFPAIP*GNSNLI
Trigger: AATCAAGTTCGAGTTACCTCATGGGATGGCAGGAAA...CTCCATCCTGTTCGTGTCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR TCA 90 bp TGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTATTCTCCAAGACCAAATATTTaGAAGGATTATCCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: WSQFPVSGASNRVYPLYSPRPNI*KDYPGF
Trigger: GAAGCCTGGATAATCCTTTCAAATATTTGGTCTTGG...AGAATACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR GCA 90 bp AACTCGAACTTGATTTCCATCCCTGATCTCTTCAGGCACATAGCTGTGAAGGATTACCCTTTGTATTCTTaGTTCAGGGATTGGGTGATA +
Preference number: 4 (lower is better)
Translates to: NSNLISIPDLFRHIAVKDYPLYS*FRDWVI
Trigger: TATCACCCAATCCCTGAAGCAAGAATACAAAGGGTA...ATCCTTCACAGCTATGTGCCTGAAGAGATCAGGGATGGAAATCAAGTTCGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR GCA 90 bp TGGAAACCTGCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTTCTTCTACTTCTTATTaGCGAAAACTGCAGAAAGAC +
Preference number: 4 (lower is better)
Translates to: WKPADAPQLDSRTANLLLSSTSY*RKLQKD
Trigger: GTCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGA...AAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGCAGGTTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp TCTTCTACTTCTTATTGCCGAAAACTGCAGAAAGACACGAACAGGATGGAGACAGGCCCTCAATTACAATaGAAATCCCAAAAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: SSTSYCRKLQKDTNRMETGPQLQ*KSQKKA
Trigger: AGCCTTCTTTTGGGATTTGCATTGTAATTGAGGGCC...TGTCTCCATCCTGTTCGTGTCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR GCA 90 bp AAATCTTCTACTTCTTATTGCCGAAAACTGCAGAAAGACACGAACAGGATGGAGTCTGGTCAGAACTTTTaGTCTGGCCCTCATTTCTTG +
Preference number: 4 (lower is better)
Translates to: KSSTSYCRKLQKDTNRMESGQNF*SGPHFL
Trigger: CAAGAAATGAGGGCCAGAGCAAAAGTTCTGACCAGA...CTCCATCCTGTTCGTGTCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CCA 90 bp CACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTATAAAAGGAGTGACCAGTaGAGCTTCAGACTTTATTTA +
Preference number: 4 (lower is better)
Translates to: HWSQFPVSGASNRVYPLYKRSDQ*SFRLYL
Trigger: TAAATAAAGTCTGAAGCTCCACTGGTCACTCCTTTT...ATACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CCA 90 bp AAATCTTCTACTTCTTATTGCCGAAAACTGCAGAAAGACACGAACAGGATGGAGAGGAGTTGTGATGTATaGCTGCATACAAGAAGGACC +
Preference number: 4 (lower is better)
Translates to: KSSTSYCRKLQKDTNRMERSCDV*LHTRRT
Trigger: GGTCCTTCTTGTATGCAGCCATACATCACAACTCCT...CTCCATCCTGTTCGTGTCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498008.5
3UTR CAA 72 bp TTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTaGTATTCTTGCTTCAGGGATTGGGTGATACTATGT +
Preference number: 4 (lower is better)
Translates to: FPVSGASNRVYP*YSCFRDWVILC
Trigger: ACATAGTATCACCCAATCCCTGAAGCAAGAATACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR TCA 90 bp AAATCTTCTACTTCTTATTGCCGAAAACTGCAGAAAGACACGAACAGGATGGAGAACAAAATGTGTCCATaGAAACCCTTCGGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: KSSTSYCRKLQKDTNRMENKMCP*KPFGSE
Trigger: CTCACTTCCGAAGGGTTTTCATGGACACATTTTGTT...CTCCATCCTGTTCGTGTCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CCA 90 bp GTGAATAGGGTTGCTATGAATATTCTTGTACACATCTCCTGGTGTACATGTATGGTTCCCAGTGGGAGATaGCTTCATTCACAAAATCCT +
Preference number: 4 (lower is better)
Translates to: VNRVAMNILVHISWCTCMVPSGR*LHSQNP
Trigger: AGGATTTTGTGAATGAAGCCATCTCCCACTGGGAAC...CATACATGTACACCAGGAGATGTGTACAAGAATATTCATAGCAACCCTATTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CCA 90 bp AGCAGTATTGTTGACAGCAGGAATGGCCAGAATTATTCAGCTCAGAGGGTTTTTCTTGTACACATCTCCTaGTGTACATGTATGAGTTTC +
Preference number: 4 (lower is better)
Translates to: SSIVDSRNGQNYSAQRVFLVHIS*CTCMSF
Trigger: GAAACTCATACATGTACACCAGGAGATGTGTACAAG...AAAAACCCTCTGAGCTGAATAATTCTGGCCATTCCTGCTGTCAACAATACTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CCA 90 bp GGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTATTCTTTTTCAACAACTTTATTaGCCAAATGCTTCTCCTATG +
Preference number: 4 (lower is better)
Translates to: GPSFQFLVHPTEYTLCILFQQLY*PNASPM
Trigger: CATAGGAGAAGCATTTGGCCAATAAAGTTGTTGAAA...AAGAATACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR GCA 90 bp CTTGTACACATCTCCTGGTGTACATGTATGAGTTTCTCTAGGATTTATCCCCAGACTTTATTGGCCAAATaGTTCTCCTATGTTTACAAC +
Preference number: 4 (lower is better)
Translates to: LVHISWCTCMSFSRIYPQTLLAK*FSYVYN
Trigger: GTTGTAAACATAGGAGAAGCATTTGGCCAATAAAGT...CTGGGGATAAATCCTAGAGAAACTCATACATGTACACCAGGAGATGTGTACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CCA 90 bp AACAGAGTATACCCTTTGTATTCTTGCTTCAGGGATTGGGTGATACTATGTCAGTTTCAACAACTTTATTaGCCAAATGCTTCTCCTATG +
Preference number: 4 (lower is better)
Translates to: NRVYPLYSCFRDWVILCQFQQLY*PNASPM
Trigger: CATAGGAGAAGCATTTGGCCAATAAAGTTGTTGAAA...CTGACATAGTATCACCCAATCCCTGAAGCAAGAATACAAAGGGTATACTCTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS CCA 90 bp GCCTCCCAGGAGAGAAGGGACTCAATGCAAGCCTTCCTGGGAGCCTaGGACTGGGGTGAGCAAGGAGAATCAGTACTCCCGGGGCACAGG +
Preference number: 5 (lower is better)
Translates to: ASQERRDSMQAFLGA*DWGEQGESVLPGHR
Trigger: CCTGTGCCCCGGGAGTACTGATTCTCCTTGCTCACCCCAGTCCCAGGCTCCCAGGAAGGCTTGCATTGAGTCCCTTCTCTCCTGGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CAA 90 bp CTGGCTATTCGGGACGGGGAGAGATCATTGGCAGCAAGATTGCGGCAACAGCCAGTGGTCGCTGTAACCTaGCCCGGTCGCCAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: LAIRDGERSLAARLRQQPVVAVT*PGRQRQ
Trigger: CTGCCTCTGGCGACCGGGCAAGGTTACAGCGACCAC...TGGCTGTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTCCCGAATAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469918.5
CDS TCA 90 bp GGAGGCCATAGGACTAGTTTCCACCGGCCGGCGAGCAAGAGGAGGTaGAATCGTGAGGCAAGTTCCCGGGGTCCTATGTGTAGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: GGHRTSFHRPASKRR*NREASSRGPMCRRR
Trigger: CCTCCTCCTACACATAGGACCCCGGGAACTTGCCTCACGATTTCACCTCCTCTTGCTCGCCGGCCGGTGGAAACTAGTCCTATGGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS GCA 90 bp AGCCTTGAAGACAGGGACGCCGCATTCTGGAGGGACTCATCCAGCTaGAATAAGGTGTCCGCTGACAGAGAGGGGGTGACCCCGGAATGC +
Preference number: 5 (lower is better)
Translates to: SLEDRDAAFWRDSSS*NKVSADREGVTPEC
Trigger: GCATTCCGGGGTCACCCCCTCTCTGTCAGCGGACACCTTATTGCAGCTGGATGAGTCCCTCCAGAATGCGGCGTCCCTGTCTTCAAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537428.2
CDS CCA 90 bp CAGGAGAGAAGGGACTCAATGCAAGCCTTCCTGGGAGCCTGGGACTaGGGTGAGCAAGGAGAATCAGTACTCCCGGGGCACAGGCAGATG +
Preference number: 5 (lower is better)
Translates to: QERRDSMQAFLGAWD*GEQGESVLPGHRQM
Trigger: CATCTGCCTGTGCCCCGGGAGTACTGATTCTCCTTGCTCACCCCAGTCCCAGGCTCCCAGGAAGGCTTGCATTGAGTCCCTTCTCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS CCA 90 bp CAGGTGTGGGCCTTAGCGGGCTTGGGCTGGCCAGAAGGGGTGTGCTaGGGAGTGTTGACTAGGGAGAGACATTTGTGGGGAGTATGTGAC +
Preference number: 5 (lower is better)
Translates to: QVWALAGLGWPEGVC*GVLTRERHLWGVCD
Trigger: GTCACATACTCCCCACAAATGTCTCTCCCTAGTCAACACTCCCCAGCACACCCCTTCTGGCCAGCCCAAGCCCGCTAAGGCCCACACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CAA 90 bp AGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCCATGACACCCAGGCTGCCACATGGCCTCCTGGTTaGGTGGCAAGGAGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: RQQGGSIHQVVLHDTQAATWPPG*VARSPA
Trigger: GGCTGGACTCCTTGCCACCAAACCAGGAGGCCATGT...GGCAGCCTGGGTGTCATGGAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp AAGGGAGTGGCGGTCTGTGGTACAGGGCACATCCACCAGCACCCGGTCATAGGTACAAGTCGGTCCTGGTaGCTGCAGCTGGGATGCTTG +
Preference number: 5 (lower is better)
Translates to: KGVAVCGTGHIHQHPVIGTSRSW*LQLGCL
Trigger: CAAGCATCCCAGCTGCAGCAACCAGGACCGACTTGT...ACCTATGACCGGGTGCTGGTGGATGTGCCCTGTACCACAGACCGCCACTCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS TCA 90 bp GAGAAGGGACTCAATGCAAGCCTTCCTGGGAGCCTGGGACTGGGGTaGGCAAGGAGAATCAGTACTCCCGGGGCACAGGCAGATGGCATA +
Preference number: 5 (lower is better)
Translates to: EKGLNASLPGSLGLG*ARRISTPGAQADGI
Trigger: TATGCCATCTGCCTGTGCCCCGGGAGTACTGATTCTCCTTGCTCACCCCAGTCCCAGGCTCCCAGGAAGGCTTGCATTGAGTCCCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS CCA 90 bp TTCCTGCAAGGCGGCGGAGACCCAGGAGTGCAGGCAAGGTCGCTATaGTATTTTCCGAGGGGTGAGGGCGACCGGGCCATTTCTTCTTAT +
Preference number: 5 (lower is better)
Translates to: FLQGGGDPGVQARSL*YFPRGEGDRAISSY
Trigger: ATAAGAAGAAATGGCCCGGTCGCCCTCACCCCTCGGAAAATACCATAGCGACCTTGCCTGCACTCCTGGGTCTCCGCCGCCTTGCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469918.5
ENST00000472157.1
CDS-3UTR CAA 90 bp GGAGGCAGCATCCATCAGGTAGTACTCCATGACACCCAGGCTGCCAGGTCTGGCGACGGGGAGAGATCATaGGCAGCAAGATTGCGGCAA +
Preference number: 5 (lower is better)
Translates to: GGSIHQVVLHDTQAARSGDGERS*AARLRQ
Trigger: TTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTC...GCCAGACCTGGCAGCCTGGGTGTCATGGAGTACTACCTGATGGATGCTGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
CDS GCA 90 bp TGGATGAAGGCAAAGGGCAGCTGTAGGGGATCTGCAGAGGCTCTTTaGAAGGGCCTTGAGAGGCCACAGGGTAGATATGGAGGCCACAGG +
Preference number: 5 (lower is better)
Translates to: WMKAKGSCRGSAEAL*KGLERPQGRYGGHR
Trigger: CCTGTGGCCTCCATATCTACCCTGTGGCCTCTCAAGGCCCTTGCAAAGAGCCTCTGCAGATCCCCTACAGCTGCCCTTTGCCTTCATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS CCA 90 bp AGAGTCCAGAGGATGAGAGGATTCGTTGCACCTTTTGCCAGGGTTTaGGCCGGCAGTATGGACAGGGTGGTCGCTGTAACCTTGCCCGGT +
Preference number: 5 (lower is better)
Translates to: RVQRMRGFVAPFARV*AGSMDRVVAVTLPG
Trigger: ACCGGGCAAGGTTACAGCGACCACCCTGTCCATACTGCCGGCCCAAACCCTGGCAAAAGGTGCAACGAATCCTCTCATCCTCTGGACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472157.1
ENST00000537428.2
CDS-3UTR CAA 90 bp CCCAGGCTGCCAGGTCTGGCAGGAGGGAAGCGACTGATATCCCCTCTGTCAAAACTGACCTCTGCTAATTaGGGGACTCTCACCCTGGTG +
Preference number: 5 (lower is better)
Translates to: PRLPGLAGGKRLISPLSKLTSAN*GTLTLV
Trigger: CACCAGGGTGAGAGTCCCCAAATTAGCAGAGGTCAG...TTTTGACAGAGGGGATATCAGTCGCTTCCCTCCTGCCAGACCTGGCAGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS CCA 90 bp CTCAACATGTCTACTTCCAGCAGACACTCAGGACCGCTCCAGTCATaGCTCCAGATCCTACCTGGCAGGAGGGAAGCGACTGATATCCCC +
Preference number: 5 (lower is better)
Translates to: LNMSTSSRHSGPLQS*LQILPGRREATDIP
Trigger: GGGGATATCAGTCGCTTCCCTCCTGCCAGGTAGGATCTGGAGCCATGACTGGAGCGGTCCTGAGTGTCTGCTGGAAGTAGACATGTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475281.1
CDS CCA 90 bp CTGAGGAAAGATGGGAGTAATGATAAGAGCCCTCCTGAGGTGAGCTaGGAGAGCCAGGCATGCCTGCCTGAGAAGAGAGTGGGAAGCCAC +
Preference number: 5 (lower is better)
Translates to: LRKDGSNDKSPPEVS*ESQACLPEKRVGSH
Trigger: GTGGCTTCCCACTCTCTTCTCAGGCAGGCATGCCTGGCTCTCCCAGCTCACCTCAGGAGGGCTCTTATCATTACTCCCATCTTTCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CAA 90 bp AAGGGAGTGGCGGTCTGTGGTACAGGGCACATCCACCAGCACCCGGTCATAGGTAAGAGTATGACGGTTTaGTGGCAGAAGCAGCCTCCT +
Preference number: 5 (lower is better)
Translates to: KGVAVCGTGHIHQHPVIGKSMTV*WQKQPP
Trigger: AGGAGGCTGCTTCTGCCACAAAACCGTCATACTCTT...ACCTATGACCGGGTGCTGGTGGATGTGCCCTGTACCACAGACCGCCACTCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CAA 90 bp GGCCGAGGGCCAGAACAGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCCAAGGGCCCACAGAATCTaGAGGTGTGAACCAAAACAG +
Preference number: 5 (lower is better)
Translates to: GRGPEQAARRQHPSGSTPRAHRI*RCEPKQ
Trigger: CTGTTTTGGTTCACACCTCAAGATTCTGTGGGCCCT...TGGAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCTGTTCTGGCCCTCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp CAGGCCGAGGGCCAGAACAGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCCTTAGAATCAGAGGTTaGAGGGTCATGCTGGGAGAG +
Preference number: 5 (lower is better)
Translates to: QAEGQNRQQGGSIHQVVLLRIRG*RVMLGE
Trigger: CTCTCCCAGCATGACCCTCAAACCTCTGATTCTAAG...GAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCTGTTCTGGCCCTCGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp TGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGATTCGTTGCACCTTTaGCCAGGGTTTGGGCCGGCA +
Preference number: 5 (lower is better)
Translates to: WRQDRECISATGPSFQFLDSLHL*PGFGPA
Trigger: TGCCGGCCCAAACCCTGGCAAAAGGTGCAACGAATC...CAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537428.2
CDS-3UTR CAA 90 bp GAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGGCCTCGCTGGGACTCTaGCTCTGGCTCCTGCTATGT +
Preference number: 5 (lower is better)
Translates to: ESASLPLVPVSSFWCIQQASLGL*LWLLLC
Trigger: ACATAGCAGGAGCCAGAGCAAGAGTCCCAGCGAGGC...CTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp ATCAGAGGTTTGAGGGTCATGCTGGGAGAGTTCCCAGACCCCAGAAAGGTTGGAGCCTCGCTGGGACTCTaGCTCTGGCTCCTGCTATGT +
Preference number: 5 (lower is better)
Translates to: IRGLRVMLGEFPDPRKVGASLGL*LWLLLC
Trigger: ACATAGCAGGAGCCAGAGCAAGAGTCCCAGCGAGGC...TCCAACCTTTCTGGGGTCTGGGAACTCTCCCAGCATGACCCTCAAACCTCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp TGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGGTAAGAGTTCCCAGTaGCCTCCCAGGAGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: WRQDRECISATGPSFQFLGKSSQ*PPRREG
Trigger: CCCTTCTCTCCTGGGAGGCAACTGGGAACTCTTACC...CAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS GCA 90 bp AGAAGCAAGGAGAGTCCAGAGGATGAGAGGATTCGTTGCACCTTTTaGCAGGGTTTGGGCCGGCAGTATGGACAGGGTGGTCGCTGTAAC +
Preference number: 5 (lower is better)
Translates to: RSKESPEDERIRCTF*QGLGRQYGQGGRCN
Trigger: GTTACAGCGACCACCCTGTCCATACTGCCGGCCCAAACCCTGGCAAAAGGTGCAACGAATCCTCTCATCCTCTGGACTCTCCTTGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472157.1
ENST00000537428.2
CDS CCA 90 bp CAGAGAGATCATCAGCCCAGTTTCCAAAACTCTGTGAGAAAGGGTTaGGGAGGCCATAGGACTAGTTTCCACCGGCCGGCGAGCAAGAGG +
Preference number: 5 (lower is better)
Translates to: QRDHQPSFQNSVRKG*GGHRTSFHRPASKR
Trigger: CCTCTTGCTCGCCGGCCGGTGGAAACTAGTCCTATGGCCTCCCCAACCCTTTCTCACAGAGTTTTGGAAACTGGGCTGATGATCTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CAA 90 bp TCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCACATGGCCTCCTGGTTaGGTGGCAAGGAGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: SLPLVPVSSFWCIQQSIPTWPPG*VARSPA
Trigger: GGCTGGACTCCTTGCCACCAAACCAGGAGGCCATGT...GGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CAA 90 bp TCGGGACGGGGAGAGATCATTGGCAGCAAGATTGCGGCAACAGCCAGTCTGAAGGAGCTCAATGGCACCTaGCACCACATACTCGTTCTG +
Preference number: 5 (lower is better)
Translates to: SGRGEIIGSKIAATASLKELNGT*HHILVL
Trigger: CAGAACGAGTATGTGGTGCAAGGTGCCATTGAGCTC...CTTCAGACTGGCTGTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp GGCCGAGGGCCAGAACAGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCCATACCTGGATGCTGTATaGATTGGCCAGGAGCTCAAT +
Preference number: 5 (lower is better)
Translates to: GRGPEQAARRQHPSGSTPYLDAV*IGQELN
Trigger: ATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTA...TGGAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCTGTTCTGGCCCTCGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp CAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTGTCAGCCTACGCATTTaGCAGAAGTACATGGGGCCA +
Preference number: 5 (lower is better)
Translates to: QDGDRTESASLPLVPVSSVSLRI*QKYMGP
Trigger: TGGCCCCATGTACTTCTGCAAAATGCGTAGGCTGAC...ACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CAA 90 bp CTGGCTATTCGGGACGGGGAGAGATCATTGGCAGCAAGATTGCGGCAACAGCCAGTCAGCCTACGCATTTaGCAGAAGTACATGGGGCCA +
Preference number: 5 (lower is better)
Translates to: LAIRDGERSLAARLRQQPVSLRI*QKYMGP
Trigger: TGGCCCCATGTACTTCTGCAAAATGCGTAGGCTGAC...TGGCTGTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTCCCGAATAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp CAGCACCCGGTCATAGGTGTCCCCCTCCAGTTCTCCCCATTTCCTGCCATCCCATTCTTGCTTCAGGGATaGGGTGATACTATGTCAGCC +
Preference number: 5 (lower is better)
Translates to: QHPVIGVPLQFSPFPAIPFLLQG*GDTMSA
Trigger: GGCTGACATAGTATCACCCAATCCCTGAAGCAAGAA...TGGGATGGCAGGAAATGGGGAGAACTGGAGGGGGACACCTATGACCGGGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp GGAGGGAAGCGACTGATATCCCCTCTGTCAAAAGTGAAGCATCGAAGGTTCGGAGCCTTTTGCCAGGGTTaGGGCCGGCAGTATGGACAG +
Preference number: 5 (lower is better)
Translates to: GGKRLISPLSKVKHRRFGAFCQG*GRQYGQ
Trigger: CTGTCCATACTGCCGGCCCAAACCCTGGCAAAAGGC...TCCGAACCTTCGATGCTTCACTTTTGACAGAGGGGATATCAGTCGCTTCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469918.5
CDS-3UTR CAA 90 bp CATAGCTGTGAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATCTCTGTGGCAGCCTTTaGCCAGGGTTTGGGCCGGCA +
Preference number: 5 (lower is better)
Translates to: HSCEGSSVVWLFGTGRDHLCGSL*PGFGPA
Trigger: TGCCGGCCCAAACCCTGGCAAAAGGCTGCCACAGAG...ATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTCACAGCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469918.5
CDS-3UTR CAA 90 bp TATTCGGGACGGGGAGAGATCATTGGCAGCAAGATTGCGGCAACAGCCAGTCTGGACGGGGAGAGATCATaGGCAGCAAGATTGCGGCAA +
Preference number: 5 (lower is better)
Translates to: YSGRGEIIGSKIAATASLDGERS*AARLRQ
Trigger: TTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTC...CAGACTGGCTGTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTCCCGAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp GGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTGACGGGGAGAGATCATaGGCAGCAAGATTGCGGCAA +
Preference number: 5 (lower is better)
Translates to: GWRQDRECISATGPSFQFDGERS*AARLRQ
Trigger: TTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTC...AAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CAA 90 bp AGAAAGACACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCAGACCCCAGAAAGGTaGGATAAGGAGGGCCCACAG +
Preference number: 5 (lower is better)
Translates to: RKTRTGWRQDRECISATGQTPER*DKEGPQ
Trigger: CTGTGGGCCCTCCTTATCCAACCTTTCTGGGGTCTG...ACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTGTCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp ATCAGAGGTTTGAGGGTCATGCTGGGAGAGTTCCCAGACCCCAGAAAGGTTGGAGCTTTGGCTCCGGCTTaGGCTTTGGTGGGAACTCCT +
Preference number: 5 (lower is better)
Translates to: IRGLRVMLGEFPDPRKVGALAPA*ALVGTP
Trigger: AGGAGTTCCCACCAAAGCCAAAGCCGGAGCCAAAGC...TCCAACCTTTCTGGGGTCTGGGAACTCTCCCAGCATGACCCTCAAACCTCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp ACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCACTCTTTGCAAGGGCCTaGAGAGGCCACAGGGTAGAT +
Preference number: 5 (lower is better)
Translates to: TGPRVHLCHWSQFPVSGALFARA*RGHRVD
Trigger: ATCTACCCTGTGGCCTCTCAAGGCCCTTGCAAAGAG...TGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS CCA 90 bp GCTCCGGCCCCAGCTTCTGCTAGGATAGGGACTGCTTTTCTGACTTaGACTTCTGCTCAGATGATGCCTCTTGCTCCAGCTCTGACTTCT +
Preference number: 5 (lower is better)
Translates to: APAPASARIGTAFLT*TSAQMMPLAPALTS
Trigger: AGAAGTCAGAGCTGGAGCAAGAGGCATCATCTGAGCAGAAGTCCAAGTCAGAAAAGCAGTCCCTATCCTAGCAGAAGCTGGGGCCGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp GCAAGGAGTCCAGCCGCAAGAAGCTGCACTTGCAGCACAGGCAATATCTGTCGCTCATTCACAAAATCCTaGGCACTCAGCTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: ARSPAARSCTCSTGNICRSFTKS*ALSCSS
Trigger: GCTGGAGCAGCTGAGTGCCAAGGATTTTGTGAATGA...GCGACAGATATTGCCTGTGCTGCAAGTGCAGCTTCTTGCGGCTGGACTCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307089.7
ENST00000498008.5
CDS-3UTR CAA 90 bp TCGGGACGGGGAGAGATCATTGGCAGCAAGATTGCGGCAACAGCCAGTCTGAAGTCATTCACAAAATCCTaGGCACTCAGCTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SGRGEIIGSKIAATASLKSFTKS*ALSCSS
Trigger: GCTGGAGCAGCTGAGTGCCAAGGATTTTGTGAATGA...CTTCAGACTGGCTGTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
CDS-3UTR CAA 90 bp ACACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTCATTCACAAAATCCTaGGCACTCAGCTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: TRTGWRQDRECISATGPSSFTKS*ALSCSS
Trigger: GCTGGAGCAGCTGAGTGCCAAGGATTTTGTGAATGA...ACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CAA 90 bp GTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTAGACGGGGAGAGATCATaGGCAGCAAGATTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: VHLCHWSQFPVSGASNRVDGERS*AARLPG
Trigger: GCCAGGCAATCTTGCTGCCAATGATCTCTCCCCGTC...TACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CAA 90 bp AGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCGCAAGAAGCTGCACTaGCAGCACAGGCAATATCTG +
Preference number: 5 (lower is better)
Translates to: RQDRECISATGPSFQFLVRKKLH*QHRQYL
Trigger: CAGATATTGCCTGTGCTGCAAGTGCAGCTTCTTGCG...CACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CAA 90 bp CAGTCGAACAGCAGGGAATTTGGGCTCTGTGGCAGCCTAGCGTCACACAGTGACGCTGATGCTCCACAATaGGACAGCAGGACAGCAAAT +
Preference number: 5 (lower is better)
Translates to: QSNSREFGLCGSLASHSDADAPQ*DSRTAN
Trigger: ATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGC...GTCACTGTGTGACGCTAGGCTGCCACAGAGCCCAAATTCCCTGCTGTTCGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp CGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCGCTGATGCTCCACAATaGGACAGCAGGACAGCAAAT +
Preference number: 5 (lower is better)
Translates to: RTGWRQDRECISATGPSFADAPQ*DSRTAN
Trigger: ATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGC...GAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CAA 90 bp GCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGTGGTCGCTGTAACCTaGCCCGGTCGCCAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: ADAPQLDSRTANLLLLIAVVAVT*PGRQRQ
Trigger: CTGCCTCTGGCGACCGGGCAAGGTTACAGCGACCAC...GGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537428.2
CDS-3UTR CAA 90 bp AGGTCTGGCAGGAGGGAAGCGACTGATATCCCCTCTGTCAAAAGTGAAGCATCGGACGGGGAGAGATCATaGGCAGCAAGATTGCGGCAA +
Preference number: 5 (lower is better)
Translates to: RSGRREATDIPSVKSEASDGERS*AARLRQ
Trigger: TTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTC...CGATGCTTCACTTTTGACAGAGGGGATATCAGTCGCTTCCCTCCTGCCAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000486270.5
ENST00000498008.5
CDS-3UTR CAA 90 bp TGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGCTACAGCTGGAATCCTaGGATGAAGGCAAAGGGCAG +
Preference number: 5 (lower is better)
Translates to: WRQDRECISATGPSFQFLLQLES*DEGKGQ
Trigger: CTGCCCTTTGCCTTCATCCAAGGATTCCAGCTGTAG...CAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp CAGGCCGAGGGCCAGAACAGGCAGCAAGGAGGCAGCATCCATCAGGTAGTACTCCTCTGGCCTAGATTTTaGGTCTGGTCAGAACTTTTG +
Preference number: 5 (lower is better)
Translates to: QAEGQNRQQGGSIHQVVLLWPRF*VWSELL
Trigger: CAAAAGTTCTGACCAGACCAAAAATCTAGGCCAGAG...GAGTACTACCTGATGGATGCTGCCTCCTTGCTGCCTGTTCTGGCCCTCGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp GAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATTGGCAGCAAGTCACAGTACGTGCCTaGAAGACAGGGACGCCGCAT +
Preference number: 5 (lower is better)
Translates to: EGSSVVWLFGTGRDHWQQVTVRA*KTGTPH
Trigger: ATGCGGCGTCCCTGTCTTCAAGGCACGTACTGTGAC...TTGCTGCCAATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CAA 90 bp GCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGAAAACTGGGCCTTAGCGGGCTaGGGCTGGCCAGAAGGGGTG +
Preference number: 5 (lower is better)
Translates to: APQLDSRTANLLLLIAENWALAG*GWPEGV
Trigger: CACCCCTTCTGGCCAGCCCAAGCCCGCTAAGGCCCA...GTTTTCGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS TCA 90 bp AGGCAAGAAAAAGGGTCTCTGGAGAAGCAAGGAGAGTCCAGAGGATaGGAGGATTCGTTGCACCTTTTGCCAGGGTTTGGGCCGGCAGTA +
Preference number: 5 (lower is better)
Translates to: RQEKGSLEKQGESRG*EDSLHLLPGFGPAV
Trigger: TACTGCCGGCCCAAACCCTGGCAAAAGGTGCAACGAATCCTCTCATCCTCTGGACTCTCCTTGCTTCTCCAGAGACCCTTTTTCTTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000472157.1
ENST00000537428.2
CDS TCA 90 bp AGTCGAACTACAGCTGGGATTGGTGCTACAGCTGGAATCCTTGGATaGAGGCAAAGGGCAGCTGTAGGGGATCTGCAGAGGCTCTTTGCA +
Preference number: 5 (lower is better)
Translates to: SRTTAGIGATAGILG*RQRAAVGDLQRLFA
Trigger: TGCAAAGAGCCTCTGCAGATCCCCTACAGCTGCCCTTTGCCTTCATCCAAGGATTCCAGCTGTAGCACCAATCCCAGCTGTAGTTCGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS GCA 90 bp TTGGACTTCTGCTCAGATGATGCCTCTTGCTCCAGCTCTGACTTCTaGCATCATGGGGACTCTTGCTTTGGCTCCGGCTTTGGCTTTGGT +
Preference number: 5 (lower is better)
Translates to: LDFCSDDASCSSSDF*HHGDSCFGSGFGFG
Trigger: ACCAAAGCCAAAGCCGGAGCCAAAGCAAGAGTCCCCATGATGGCAGAAGTCAGAGCTGGAGCAAGAGGCATCATCTGAGCAGAAGTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp CGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACACGCAAGAAGCTGCACTaGCAGCACAGGCAATATCTG +
Preference number: 5 (lower is better)
Translates to: RECISATGPSFQFLVHPTRKKLH*QHRQYL
Trigger: CAGATATTGCCTGTGCTGCAAGTGCAGCTTCTTGCG...TGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CAA 90 bp TCTCCTTCTAAGCCCCTAAGCGGGCAGCAAACTTTAGTACAGGCCTGGAGATGGGAGCTCAATGGCACCTaGCACCACATACTCGTTCTG +
Preference number: 5 (lower is better)
Translates to: SPSKPLSGQQTLVQAWRWELNGT*HHILVL
Trigger: CAGAACGAGTATGTGGTGCAAGGTGCCATTGAGCTC...CCATCTCCAGGCCTGTACTAAAGTTTGCTGCCCGCTTAGGGGCTTAGAAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CAA 90 bp GGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTACCTGGATGCTGTATaGATTGGCCAGGAGCTCAAT +
Preference number: 5 (lower is better)
Translates to: GDRTESASLPLVPVSSFWYLDAV*IGQELN
Trigger: ATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTA...CCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CAA 90 bp TCAGATCTTCCACCTGTACCTGGATGCTGTATTGATTGGCCAGGAGCTCAATGGACAAGTCGGTCCTGGTaGCTGCAGCTGGGATGCTTG +
Preference number: 5 (lower is better)
Translates to: SDLPPVPGCCIDWPGAQWTSRSW*LQLGCL
Trigger: CAAGCATCCCAGCTGCAGCAACCAGGACCGACTTGT...CCATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTACAGGTGGAAGATCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp TCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCATGGGGACTCTTGCTTaGGCTCCGGCTTTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: SLPLVPVSSFWCIQQSIPMGTLA*APALAL
Trigger: CAAAGCCAAAGCCGGAGCCAAAGCAAGAGTCCCCAT...GGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp AGCTGTGAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATTGGATGGGGACTCTTGCTTaGGCTCCGGCTTTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: SCEGSSVVWLFGTGRDHWMGTLA*APALAL
Trigger: CAAAGCCAAAGCCGGAGCCAAAGCAAGAGTCCCCAT...CCAATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTCACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp TGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGCCCTGACTTGTGTTTaGTTGAGGATTACTGCTCCG +
Preference number: 5 (lower is better)
Translates to: WRQDRECISATGPSFQFLALTCV*LRITAP
Trigger: CGGAGCAGTAATCCTCAACAAAACACAAGTCAGGGC...CAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp TATTCGGGACGGGGAGAGATCATTGGCAGCAAGATTGCGGCAACAGCCAGTCTGCTCATTTATGCTAAGTaGGGGACTCTCACTCTGGCC +
Preference number: 5 (lower is better)
Translates to: YSGRGEIIGSKIAATASLLIYAK*GTLTLA
Trigger: GGCCAGAGTGAGAGTCCCCAACTTAGCATAAATGAG...CAGACTGGCTGTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTCCCGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp GATCTTCCACCTGTACCTGGATGCTGTATTGATTGGCCAGGAGCTCAATGGCACCTGACCTCTGCTAATTaGGGGACTCTCACCCTGGTG +
Preference number: 5 (lower is better)
Translates to: DLPPVPGCCIDWPGAQWHLTSAN*GTLTLV
Trigger: CACCAGGGTGAGAGTCCCCAAATTAGCAGAGGTCAG...GTGCCATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTACAGGTGGAAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp CACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTATGGCTCTGTGGCAGCCTaGAAGACAGGGACGCCGCAT +
Preference number: 5 (lower is better)
Translates to: HWSQFPVSGASNRVYPLYGSVAA*KTGTPH
Trigger: ATGCGGCGTCCCTGTCTTCAAGGCTGCCACAGAGCC...ATACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537428.2
CDS-3UTR CAA 90 bp GATTGGCCAGGAGCTCAATGGCACCTTGCACCACATACTCGTTCTGTAAGTGTGCGCAAGAAGCTGCACTaGCAGCACAGGCAATATCTG +
Preference number: 5 (lower is better)
Translates to: DWPGAQWHLAPHTRSVSVRKKLH*QHRQYL
Trigger: CAGATATTGCCTGTGCTGCAAGTGCAGCTTCTTGCG...CACACTTACAGAACGAGTATGTGGTGCAAGGTGCCATTGAGCTCCTGGCCAATC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp TGGAAACCTGCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTACATGGCCTCCTGGTTaGGTGGCAAGGAGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: WKPADAPQLDSRTANLLLTWPPG*VARSPA
Trigger: GGCTGGACTCCTTGCCACCAAACCAGGAGGCCATGT...AAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGCAGGTTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CAA 90 bp CTTCCACCTGTACCTGGATGCTGTATTGATTGGCCAGGAGCTCAATGGCACCTTGAGCTCAATGGCACCTaGCACCACATACTCGTTCTG +
Preference number: 5 (lower is better)
Translates to: LPPVPGCCIDWPGAQWHLELNGT*HHILVL
Trigger: CAGAACGAGTATGTGGTGCAAGGTGCCATTGAGCTC...AAGGTGCCATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTACAGGTGGAAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp AGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGAGCTCAATGGCACCTaGCACCACATACTCGTTCTG +
Preference number: 5 (lower is better)
Translates to: RVHLCHWSQFPVSGASNRELNGT*HHILVL
Trigger: CAGAACGAGTATGTGGTGCAAGGTGCCATTGAGCTC...TCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CAA 90 bp GTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTAGTCAGCCTACGCATTTaGCAGAAGTACATGGGGCCA +
Preference number: 5 (lower is better)
Translates to: VHLCHWSQFPVSGASNRVVSLRI*QKYMGP
Trigger: TGGCCCCATGTACTTCTGCAAAATGCGTAGGCTGAC...TACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CAA 90 bp ACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAAAGGGCCCACAGAATCTaGAGGTGTGAACCAAAACAG +
Preference number: 5 (lower is better)
Translates to: TESASLPLVPVSSFWCIQRAHRI*RCEPKQ
Trigger: CTGTTTTGGTTCACACCTCAAGATTCTGTGGGCCCT...TTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp TGCAGCACAGGCAATATCTGTCGCTCCTTCTTCCTTGACCGCTTAAAGATGTTGCAGACCCCAGAAAGGTaGGATAAGGAGGGCCCACAG +
Preference number: 5 (lower is better)
Translates to: CSTGNICRSFFLDRLKMLQTPER*DKEGPQ
Trigger: CTGTGGGCCCTCCTTATCCAACCTTTCTGGGGTCTG...CAACATCTTTAAGCGGTCAAGGAAGAAGGAGCGACAGATATTGCCTGTGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp GCCGCAAGAAGCTGCACTTGCAGCACAGGCAATATCTGTCGCTCCTTCTTCCTTCTCATTTATGCTAAGTaGGGGACTCTCACTCTGGCC +
Preference number: 5 (lower is better)
Translates to: AARSCTCSTGNICRSFFLLIYAK*GTLTLA
Trigger: GGCCAGAGTGAGAGTCCCCAACTTAGCATAAATGAG...AAGGAAGAAGGAGCGACAGATATTGCCTGTGCTGCAAGTGCAGCTTCTTGCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp GAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATTGGCAGCAACCTGGGGGAAGTTCTTaGGGGCTGGAATTTGAAGGA +
Preference number: 5 (lower is better)
Translates to: EGSSVVWLFGTGRDHWQQPGGSS*GLEFEG
Trigger: TCCTTCAAATTCCAGCCCCAAAGAACTTCCCCCAGG...TTGCTGCCAATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS TCA 90 bp TGCTCCGGTTCCGACTTTTGCCATCATAGACTCTTGCTCTTGCCCTaGCCTCTGCTAATTTGGGGACTCTCACCCTGGTGCTCATTTATG +
Preference number: 5 (lower is better)
Translates to: CSGSDFCHHRLLLLP*PLLIWGLSPWCSFM
Trigger: CATAAATGAGCACCAGGGTGAGAGTCCCCAAATTAGCAGAGGTCAGGGCAAGAGCAAGAGTCTATGATGGCAAAAGTCGGAACCGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp AGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGATCATTCACAAAATCCTaGGCACTCAGCTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: RVHLCHWSQFPVSGASNRSFTKS*ALSCSS
Trigger: GCTGGAGCAGCTGAGTGCCAAGGATTTTGTGAATGA...TCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CAA 90 bp ATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTTTCTTGCTTCAGGGATaGGGTGATACTATGTCAGCC +
Preference number: 5 (lower is better)
Translates to: METGPRVHLCHWSQFPVSFLLQG*GDTMSA
Trigger: GGCTGACATAGTATCACCCAATCCCTGAAGCAAGAA...AGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CAA 90 bp CGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCATACCCTTTGTATTCTaGCTTCAGGGATTGGGTGAT +
Preference number: 5 (lower is better)
Translates to: RTGWRQDRECISATGPSFIPFVF*LQGLGD
Trigger: ATCACCCAATCCCTGAAGCAAGAATACAAAGGGTAT...GAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CAA 90 bp ACACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTATACCCTTTGTATTCTaGCTTCAGGGATTGGGTGAT +
Preference number: 5 (lower is better)
Translates to: TRTGWRQDRECISATGPSIPFVF*LQGLGD
Trigger: ATCACCCAATCCCTGAAGCAAGAATACAAAGGGTAT...ACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CAA 90 bp CTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTGCTGATGCTCCACAATaGGACAGCAGGACAGCAAAT +
Preference number: 5 (lower is better)
Translates to: LCHWSQFPVSGASNRVYPADAPQ*DSRTAN
Trigger: ATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGC...AGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CAA 90 bp GATTGGCCAGGAGCTCAATGGCACCTTGCACCACATACTCGTTCTGTAAGTGTGGCTGATGCTCCACAATaGGACAGCAGGACAGCAAAT +
Preference number: 5 (lower is better)
Translates to: DWPGAQWHLAPHTRSVSVADAPQ*DSRTAN
Trigger: ATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGC...CACACTTACAGAACGAGTATGTGGTGCAAGGTGCCATTGAGCTCCTGGCCAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp GCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATATGGGCAGCAGTATTGTaGACAGCAGGAATGGCCAGA +
Preference number: 5 (lower is better)
Translates to: ASLPLVPVSSFWCIQQSIWAAVL*TAGMAR
Trigger: TCTGGCCATTCCTGCTGTCAACAATACTGCTGCCCA...TATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CAA 90 bp TGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTATTCTCGGAGTCTCACTCTCTaGCCCAGGCTGCTCACTGCA +
Preference number: 5 (lower is better)
Translates to: WSQFPVSGASNRVYPLYSRSLTL*PRLLTA
Trigger: TGCAGTGAGCAGCCTGGGCAAGAGAGTGAGACTCCG...AGAATACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CAA 90 bp CTTCCACCTGTACCTGGATGCTGTATTGATTGGCCAGGAGCTCAATGGCACCTTCTGACTTGTGTTTTGTaGAGGATTACTGCTCCGGCC +
Preference number: 5 (lower is better)
Translates to: LPPVPGCCIDWPGAQWHLLTCVL*RITAPA
Trigger: GGCCGGAGCAGTAATCCTCAACAAAACACAAGTCAG...AAGGTGCCATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTACAGGTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp CATAGCTGTGAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATGGAGATATAAACTGGTaGCCCAGGGGTGAAGGGAAG +
Preference number: 5 (lower is better)
Translates to: HSCEGSSVVWLFGTGRDHGDINW*PRGEGK
Trigger: CTTCCCTTCACCCCTGGGCAACCAGTTTATATCTCC...ATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTCACAGCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CAA 90 bp GTCCTTATGCACATGTGGACTGCACTGCAAAGTGCCTTTGGATTGAATCATCATTCATTGGCAGCAAGATaGCCTGGCAGGAGGGAAGCG +
Preference number: 5 (lower is better)
Translates to: VLMHMWTALQSAFGLNHHSLAAR*PGRREA
Trigger: CGCTTCCCTCCTGCCAGGCAATCTTGCTGCCAATGA...ATGATGATTCAATCCAAAGGCACTTTGCAGTGCAGTCCACATGTGCATAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CAA 90 bp TCTTCTACTTCTTATTGCCGAAAACTGCAGAAAGACACGAACAGGATGGAGACAACATGGCCTCCTGGTTaGGTGGCAAGGAGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: SSTSYCRKLQKDTNRMETTWPPG*VARSPA
Trigger: GGCTGGACTCCTTGCCACCAAACCAGGAGGCCATGT...TGTCTCCATCCTGTTCGTGTCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CAA 90 bp GTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCTGGATGCTGTATaGATTGGCCAGGAGCTCAAT +
Preference number: 5 (lower is better)
Translates to: VHLCHWSQFPVSGASNRVYLDAV*IGQELN
Trigger: ATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTA...TACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CAA 90 bp GCAGAAGTACATGGGGCCAAAATTGGCCATGAGGTTTGGTATTACCAGCTCCCCTTCTTGCTTCAGGGATaGGGTGATACTATGTCAGCC +
Preference number: 5 (lower is better)
Translates to: AEVHGAKIGHEVWYYQLPFLLQG*GDTMSA
Trigger: GGCTGACATAGTATCACCCAATCCCTGAAGCAAGAA...GGGGAGCTGGTAATACCAAACCTCATGGCCAATTTTGGCCCCATGTACTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp ACACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTAACAGAGTATACCCTTaGTATTCTTGCTTCAGGGAT +
Preference number: 5 (lower is better)
Translates to: TRTGWRQDRECISATGPSNRVYP*YSCFRD
Trigger: ATCCCTGAAGCAAGAATACAAAGGGTATACTCTGTT...ACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CAA 90 bp TGCAGCACAGGCAATATCTGTCGCTCCTTCTTCCTTGACCGCTTAAAGATGTTGGAACTACAGCTGGGATaGGTGCTACAGCTGGAATCC +
Preference number: 5 (lower is better)
Translates to: CSTGNICRSFFLDRLKMLELQLG*VLQLES
Trigger: GGATTCCAGCTGTAGCACCAATCCCAGCTGTAGTTC...CAACATCTTTAAGCGGTCAAGGAAGAAGGAGCGACAGATATTGCCTGTGCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp GCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGAAAACGCTTTGGCTCCGGCTTaGGCTTTGGTGGGAACTCCT +
Preference number: 5 (lower is better)
Translates to: APQLDSRTANLLLLIAENALAPA*ALVGTP
Trigger: AGGAGTTCCCACCAAAGCCAAAGCCGGAGCCAAAGC...GTTTTCGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp CTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTCACTCTGGCCCTGACTaGTGTTTTGTTGAGGATTAC +
Preference number: 5 (lower is better)
Translates to: LCHWSQFPVSGASNRVYPHSGPD*CFVEDY
Trigger: GTAATCCTCAACAAAACACAAGTCAGGGCCAGAGTG...AGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp AGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTCTGGTCAGAACTTTaGCTCTGGCCCTCATTTCTT +
Preference number: 5 (lower is better)
Translates to: RVHLCHWSQFPVSGASNRVWSEL*LWPSFL
Trigger: AAGAAATGAGGGCCAGAGCAAAAGTTCTGACCAGAC...TCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp TATTCGGGACGGGGAGAGATCATTGGCAGCAAGATTGCGGCAACAGCCAGTCTGGTTACTATCTATGCCTaGCTCTGGCCTAGATTTTTG +
Preference number: 5 (lower is better)
Translates to: YSGRGEIIGSKIAATASLVTIYA*LWPRFL
Trigger: CAAAAATCTAGGCCAGAGCAAGGCATAGATAGTAAC...CAGACTGGCTGTTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTCCCGAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp TTCCCAGTGGGAGATGGCTTCATTCACAAAATCCTTGGCACTCAGCTGCTCCAGAGGTCAAGCTGTGGTTaGGGTTCACAAGAGTCTAGA +
Preference number: 5 (lower is better)
Translates to: FPVGDGFIHKILGTQLLQRSSCG*GSQESR
Trigger: TCTAGACTCTTGTGAACCCAAACCACAGCTTGACCT...CTGGAGCAGCTGAGTGCCAAGGATTTTGTGAATGAAGCCATCTCCCACTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CAA 90 bp GTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACATGGGGCCAAAATaGGCCATGAGGTTTGGTATT +
Preference number: 5 (lower is better)
Translates to: VHLCHWSQFPVSGASNRVYMGPK*AMRFGI
Trigger: AATACCAAACCTCATGGCCAATTTTGGCCCCATGTA...TACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CAA 90 bp AGAAAGACACGAACAGGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTTGCCATCATGCCCTTTaGTACTTTTATAGAGATGGG +
Preference number: 5 (lower is better)
Translates to: RKTRTGWRQDRECISATGCHHAL*YFYRDG
Trigger: CCCATCTCTATAAAAGTACAAAAGGGCATGATGGCA...ACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCCTGTTCGTGTCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CAA 90 bp GTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTAGCATCCATCCTGGTTTaGGAAGAGCTCAAATCAGAA +
Preference number: 5 (lower is better)
Translates to: VHLCHWSQFPVSGASNRVASILV*EELKSE
Trigger: TTCTGATTTGAGCTCTTCCAAAACCAGGATGGATGC...TACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CAA 90 bp GATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGAAGACGGGGAGAGATCATaGGCAGCAAGATTGCGGCAA +
Preference number: 5 (lower is better)
Translates to: DAPQLDSRTANLLLLIAEDGERS*AARLRQ
Trigger: TTGCCGCAATCTTGCTGCCAATGATCTCTCCCCGTC...TTCGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CAA 90 bp ATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGAAAACCTTTTGCCAGGGTTaGGGCCGGCAGTATGGACAG +
Preference number: 5 (lower is better)
Translates to: MLHNWTAGQQIFYFLLPKTFCQG*GRQYGQ
Trigger: CTGTCCATACTGCCGGCCCAAACCCTGGCAAAAGGT...TTTCGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537428.2
CDS-3UTR CAA 90 bp GCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCCTACAGCTGGAATCCTaGGATGAAGGCAAAGGGCAG +
Preference number: 5 (lower is better)
Translates to: ADAPQLDSRTANLLLLIALQLES*DEGKGQ
Trigger: CTGCCCTTTGCCTTCATCCAAGGATTCCAGCTGTAG...GGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp TCAGATCTTCCACCTGTACCTGGATGCTGTATTGATTGGCCAGGAGCTCAATGGCACTCTGGCCCTGACTaGTGTTTTGTTGAGGATTAC +
Preference number: 5 (lower is better)
Translates to: SDLPPVPGCCIDWPGAQWHSGPD*CFVEDY
Trigger: GTAATCCTCAACAAAACACAAGTCAGGGCCAGAGTG...CCATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTACAGGTGGAAGATCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp GCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATAGTCTGGTCAGAACTTTaGCTCTGGCCCTCATTTCTT +
Preference number: 5 (lower is better)
Translates to: ASLPLVPVSSFWCIQQSIVWSEL*LWPSFL
Trigger: AAGAAATGAGGGCCAGAGCAAAAGTTCTGACCAGAC...TATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp TGTGAAGGATCTTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATTGGCAGCTCTGGCCTAGATTTTaGGTCTGGTCAGAACTTTTG +
Preference number: 5 (lower is better)
Translates to: CEGSSVVWLFGTGRDHWQLWPRF*VWSELL
Trigger: CAAAAGTTCTGACCAGACCAAAAATCTAGGCCAGAG...CTGCCAATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAAGATCCTTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS CCA 90 bp AAGTCATGTCAAAATTCTGCAAAGCCAGTCGAACAGCAGGGAATTTaGGCTCTGTGGCAGCCTAAAAGAGAGAGGACAGGCCATTTCTTC +
Preference number: 5 (lower is better)
Translates to: KSCQNSAKPVEQQGI*ALWQPKRERTGHFF
Trigger: GAAGAAATGGCCTGTCCTCTCTCTTTTAGGCTGCCACAGAGCCCAAATTCCCTGCTGTTCGACTGGCTTTGCAGAATTTTGACATGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486270.5
CDS-3UTR CAA 90 bp CTGCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCGCAAGAAGCTGCACTaGCAGCACAGGCAATATCTG +
Preference number: 5 (lower is better)
Translates to: LLMLHNWTAGQQIFYFLLRKKLH*QHRQYL
Trigger: CAGATATTGCCTGTGCTGCAAGTGCAGCTTCTTGCG...CAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CAA 90 bp GCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATATACATGGGGCCAAAATaGGCCATGAGGTTTGGTATT +
Preference number: 5 (lower is better)
Translates to: ASLPLVPVSSFWCIQQSIYMGPK*AMRFGI
Trigger: AATACCAAACCTCATGGCCAATTTTGGCCCCATGTA...TATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CAA 90 bp GATCTTCCACCTGTACCTGGATGCTGTATTGATTGGCCAGGAGCTCAATGGCACATACCCTTTGTATTCTaGCTTCAGGGATTGGGTGAT +
Preference number: 5 (lower is better)
Translates to: DLPPVPGCCIDWPGAQWHIPFVF*LQGLGD
Trigger: ATCACCCAATCCCTGAAGCAAGAATACAAAGGGTAT...GTGCCATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTACAGGTGGAAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp GGATGGAGACAGGACCGAGAGTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTATCTTCTACTTCTTATaGCCGAAAACTGCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: GWRQDRECISATGPSFQFIFYFL*PKTAER
Trigger: TCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGAT...AAACTGGAAACTGGGACCAGTGGCAGAGATGCACTCTCGGTCCTGTCTCCATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CAA 90 bp GCAGAAGTACATGGGGCCAAAATTGGCCATGAGGTTTGGTATTACCAGCTCCCCGTTACTATCTATGCCTaGCTCTGGCCTAGATTTTTG +
Preference number: 5 (lower is better)
Translates to: AEVHGAKIGHEVWYYQLPVTIYA*LWPRFL
Trigger: CAAAAATCTAGGCCAGAGCAAGGCATAGATAGTAAC...GGGGAGCTGGTAATACCAAACCTCATGGCCAATTTTGGCCCCATGTACTTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS CCA 90 bp CAAAATTCTGCAAAGCCAGTCGAACAGCAGGGAATTTGGGCTCTGTaGCAGCCTAAAAGAGAGAGGACAGGCCATTTCTTCTTATATCGA +
Preference number: 5 (lower is better)
Translates to: QNSAKPVEQQGIWAL*QPKRERTGHFFLYR
Trigger: TCGATATAAGAAGAAATGGCCTGTCCTCTCTCTTTTAGGCTGCCACAGAGCCCAAATTCCCTGCTGTTCGACTGGCTTTGCAGAATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486270.5
CDS-3UTR CAA 90 bp GTCCCCAACTGCAGCCCCAGGTCTATAGAGTTTCAACAACTTTATTGGCCAAATTACCTGGATGCTGTATaGATTGGCCAGGAGCTCAAT +
Preference number: 5 (lower is better)
Translates to: VPNCSPRSIEFQQLYWPNYLDAV*IGQELN
Trigger: ATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTA...ATTTGGCCAATAAAGTTGTTGAAACTCTATAGACCTGGGGCTGCAGTTGGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CAA 90 bp GTGCATCTCTGCCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTAAACAGAGTATACCCTTaGTATTCTTGCTTCAGGGAT +
Preference number: 5 (lower is better)
Translates to: VHLCHWSQFPVSGASNRVNRVYP*YSCFRD
Trigger: ATCCCTGAAGCAAGAATACAAAGGGTATACTCTGTT...TACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGGCAGAGATGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CAA 90 bp CTGCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCTTAGAATCAGAGGTTaGAGGGTCATGCTGGGAGAG +
Preference number: 5 (lower is better)
Translates to: LLMLHNWTAGQQIFYFLLLRIRG*RVMLGE
Trigger: CTCTCCCAGCATGACCCTCAAACCTCTGATTCTAAG...CAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp GCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGAAAACCTGACTTGTGTTTTGTaGAGGATTACTGCTCCGGCC +
Preference number: 5 (lower is better)
Translates to: APQLDSRTANLLLLIAENLTCVL*RITAPA
Trigger: GGCCGGAGCAGTAATCCTCAACAAAACACAAGTCAG...GTTTTCGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp AACTTGATTTCCATCCCTGATCTCTTCAGGCACATAGCTGTGAAGGATCTTCTGGCCCTGACTTGTGTTTaGTTGAGGATTACTGCTCCG +
Preference number: 5 (lower is better)
Translates to: NLISIPDLFRHIAVKDLLALTCV*LRITAP
Trigger: CGGAGCAGTAATCCTCAACAAAACACAAGTCAGGGC...CAGAAGATCCTTCACAGCTATGTGCCTGAAGAGATCAGGGATGGAAATCAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp CACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTATTACATGGGGCCAAAATaGGCCATGAGGTTTGGTATT +
Preference number: 5 (lower is better)
Translates to: HWSQFPVSGASNRVYPLYYMGPK*AMRFGI
Trigger: AATACCAAACCTCATGGCCAATTTTGGCCCCATGTA...ATACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CAA 90 bp AACAGAGTATACCCTTTGTATTCTTGCTTCAGGGATTGGGTGATACTATGTCAGGTCAGCCTACGCATTTaGCAGAAGTACATGGGGCCA +
Preference number: 5 (lower is better)
Translates to: NRVYPLYSCFRDWVILCQVSLRI*QKYMGP
Trigger: TGGCCCCATGTACTTCTGCAAAATGCGTAGGCTGAC...CTGACATAGTATCACCCAATCCCTGAAGCAAGAATACAAAGGGTATACTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp TGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTATTCTTTCTTGCTTCAGGGATaGGGTGATACTATGTCAGCC +
Preference number: 5 (lower is better)
Translates to: WSQFPVSGASNRVYPLYSFLLQG*GDTMSA
Trigger: GGCTGACATAGTATCACCCAATCCCTGAAGCAAGAA...AGAATACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CAA 90 bp CCACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTAATACCCTTTGTATTCTaGCTTCAGGGATTGGGTGAT +
Preference number: 5 (lower is better)
Translates to: PLVPVSSFWCIQQSIPFVIPFVF*LQGLGD
Trigger: ATCACCCAATCCCTGAAGCAAGAATACAAAGGGTAT...TACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CAA 90 bp CTTCCACCTGTACCTGGATGCTGTATTGATTGGCCAGGAGCTCAATGGCACCTTATCTTCTACTTCTTATaGCCGAAAACTGCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: LPPVPGCCIDWPGAQWHLIFYFL*PKTAER
Trigger: TCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGAT...AAGGTGCCATTGAGCTCCTGGCCAATCAATACAGCATCCAGGTACAGGTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp CTTGTACACATCTCCTGGTGTACATGTATGAGTTTCTCTAGGATTTATCCCCAGCCTCCTAAGCCACATTaGGGCAGCAGTATTGTTGAC +
Preference number: 5 (lower is better)
Translates to: LVHISWCTCMSFSRIYPQPPKPH*GSSIVD
Trigger: GTCAACAATACTGCTGCCCAAATGTGGCTTAGGAGG...CTGGGGATAAATCCTAGAGAAACTCATACATGTACACCAGGAGATGTGTACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CAA 90 bp AACAGAGTATACCCTTTGTATTCTTGCTTCAGGGATTGGGTGATACTATGTCAGGAACTACAGCTGGGATaGGTGCTACAGCTGGAATCC +
Preference number: 5 (lower is better)
Translates to: NRVYPLYSCFRDWVILCQELQLG*VLQLES
Trigger: GGATTCCAGCTGTAGCACCAATCCCAGCTGTAGTTC...CTGACATAGTATCACCCAATCCCTGAAGCAAGAATACAAAGGGTATACTCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp AACTCGAACTTGATTTCCATCCCTGATCTCTTCAGGCACATAGCTGTGAAGGATACTAGGGAGAGACATTaGTGGGGAGTATGTGACTGT +
Preference number: 5 (lower is better)
Translates to: NSNLISIPDLFRHIAVKDTRERH*WGVCDC
Trigger: ACAGTCACATACTCCCCACAAATGTCTCTCCCTAGT...ATCCTTCACAGCTATGTGCCTGAAGAGATCAGGGATGGAAATCAAGTTCGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS-3UTR CAA 90 bp AACAGAGTATACCCTTTGTATTCTTGCTTCAGGGATTGGGTGATACTATGTCAGGTGTGCTGGGGAGTGTaGACTAGGGAGAGACATTTG +
Preference number: 5 (lower is better)
Translates to: NRVYPLYSCFRDWVILCQVCWGV*TRERHL
Trigger: CAAATGTCTCTCCCTAGTCAACACTCCCCAGCACAC...CTGACATAGTATCACCCAATCCCTGAAGCAAGAATACAAAGGGTATACTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS CCA 90 bp ATAAATATTAGCAATATTATGGTCCTTATTACAGAGGGTAGAAGCTaGGTCTCAACATGTCTACTTCCAGCAGACACTCAGGACCGCTCC +
Preference number: 5 (lower is better)
Translates to: INISNIMVLITEGRS*VSTCLLPADTQDRS
Trigger: GGAGCGGTCCTGAGTGTCTGCTGGAAGTAGACATGTTGAGACCCAGCTTCTACCCTCTGTAATAAGGACCATAATATTGCTAATATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475281.1
CDS-3UTR CAA 90 bp TCTTCTACTTCTTATTGCCGAAAACTGCAGAAAGACACGAACAGGATGGAGACATACATGGGGCCAAAATaGGCCATGAGGTTTGGTATT +
Preference number: 5 (lower is better)
Translates to: SSTSYCRKLQKDTNRMETYMGPK*AMRFGI
Trigger: AATACCAAACCTCATGGCCAATTTTGGCCCCATGTA...TGTCTCCATCCTGTTCGTGTCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CAA 90 bp CTTCAGGGATTGGGTGATACTATGTCAGCCTACGCATTTTGCAGAAGTACATGGAACAGAGTATACCCTTaGTATTCTTGCTTCAGGGAT +
Preference number: 5 (lower is better)
Translates to: LQGLGDTMSAYAFCRSTWNRVYP*YSCFRD
Trigger: ATCCCTGAAGCAAGAATACAAAGGGTATACTCTGTT...CCATGTACTTCTGCAAAATGCGTAGGCTGACATAGTATCACCCAATCCCTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp CTTCAGGGATTGGGTGATACTATGTCAGCCTACGCATTTTGCAGAAGTACATGGTCCAAGACCAAATATTaGAAAGGATTATCCAGGCTT +
Preference number: 5 (lower is better)
Translates to: LQGLGDTMSAYAFCRSTWSKTKY*KGLSRL
Trigger: AAGCCTGGATAATCCTTTCAAATATTTGGTCTTGGA...CCATGTACTTCTGCAAAATGCGTAGGCTGACATAGTATCACCCAATCCCTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CAA 90 bp CACTGGTCCCAGTTTCCAGTTTCTGGTGCATCCAACAGAGTATACCCTTTGTATTCACTACTCTGGCATTaGCTAATAATAGTCGAACTA +
Preference number: 5 (lower is better)
Translates to: HWSQFPVSGASNRVYPLYSLLWH*LIIVEL
Trigger: TAGTTCGACTATTATTAGCAAATGCCAGAGTAGTGA...ATACAAAGGGTATACTCTGTTGGATGCACCAGAAACTGGAAACTGGGACCAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp AACTCGAACTTGATTTCCATCCCTGATCTCTTCAGGCACATAGCTGTGAAGGATATCTTCTACTTCTTATaGCCGAAAACTGCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: NSNLISIPDLFRHIAVKDIFYFL*PKTAER
Trigger: TCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGAT...ATCCTTCACAGCTATGTGCCTGAAGAGATCAGGGATGGAAATCAAGTTCGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp GATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGCCGAAATCTTCTACTTCTTATaGCCGAAAACTGCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: DAPQLDSRTANLLLLIAEIFYFL*PKTAER
Trigger: TCTTTCTGCAGTTTTCGGCAATAAGAAGTAGAAGAT...TTCGGCAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
ENST00000537428.2
CDS-3UTR CAA 90 bp CTTGTACACATCTCCTGGTGTACATGTATGAGTTTCTCTAGGATTTATCCCCAGAATATTCCAGTTTACTaGTCCACTCTCTTGCTCATG +
Preference number: 5 (lower is better)
Translates to: LVHISWCTCMSFSRIYPQNIPVY*STLLLM
Trigger: CATGAGCAAGAGAGTGGACAAGTAAACTGGAATATT...CTGGGGATAAATCCTAGAGAAACTCATACATGTACACCAGGAGATGTGTACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS-3UTR CAA 90 bp CTGCTGATGCTCCACAATTGGACAGCAGGACAGCAAATCTTCTACTTCTTATTGTCACTACTCTGGCATTaGCTAATAATAGTCGAACTA +
Preference number: 5 (lower is better)
Translates to: LLMLHNWTAGQQIFYFLLSLLWH*LIIVEL
Trigger: TAGTTCGACTATTATTAGCAAATGCCAGAGTAGTGA...CAATAAGAAGTAGAAGATTTGCTGTCCTGCTGTCCAATTGTGGAGCATCAGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS-3UTR CAA 90 bp AACAGAGTATACCCTTTGTATTCTTGCTTCAGGGATTGGGTGATACTATGTCAGAACAGAGTATACCCTTaGTATTCTTGCTTCAGGGAT +
Preference number: 5 (lower is better)
Translates to: NRVYPLYSCFRDWVILCQNRVYP*YSCFRD
Trigger: ATCCCTGAAGCAAGAATACAAAGGGTATACTCTGTT...CTGACATAGTATCACCCAATCCCTGAAGCAAGAATACAAAGGGTATACTCTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307089.7
ENST00000495427.1
ENST00000498008.5
CDS CCA 72 bp GGCGGCGGAGACCCAGGAGTGCAGGCAAGGTCGCTATaGTATTTTCCGAGGGGTGAGGGCGACCGGGCTGGA +
Preference number: 6 (lower is better)
Translates to: GGGDPGVQARSL*YFPRGEGDRAG
Trigger: TCCAGCCCGGTCGCCCTCACCCCTCGGAAAATACCATAGCGACCTTGCCTGCACTCCTGGGTCTCCGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537428.2
CDS CCA 72 bp GGCGGCGGAGACCCAGGAGTGCAGGCAAGGTCGCTATaGTATTTTCCGAGGGGTGAGGGCGACCGGGCCATT +
Preference number: 6 (lower is better)
Translates to: GGGDPGVQARSL*YFPRGEGDRAI
Trigger: AATGGCCCGGTCGCCCTCACCCCTCGGAAAATACCATAGCGACCTTGCCTGCACTCCTGGGTCTCCGCCGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469918.5
ENST00000472157.1
CDS CAA 90 bp GCCAGGGTTTGGGCCGGCAGTATGGACAGGGTGGTCGCTGTAACCTaGCCCGGTCGCCAGAGGCAGCTCGAGGTTGAGGAAGGGGCTGAA +
Preference number: 6 (lower is better)
Translates to: ARVWAGSMDRVVAVT*PGRQRQLEVEEGAE
Trigger: TTCAGCCCCTTCCTCAACCTCGAGCTGCCTCTGGCGACCGGGCAAGGTTACAGCGACCACCCTGTCCATACTGCCGGCCCAAACCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469918.5
ENST00000472157.1
ENST00000537428.2
CDS GCA 72 bp AGTTCCCAGTTGCCTCCCAGGAGAGAAGGGACTCAATaGAAGCCTTCCTGGGAGCCTGGGACTGGGGTGAGC +
Preference number: 6 (lower is better)
Translates to: SSQLPPRREGTQ*KPSWEPGTGVS
Trigger: GCTCACCCCAGTCCCAGGCTCCCAGGAAGGCTTGCATTGAGTCCCTTCTCTCCTGGGAGGCAACTGGGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS GCA 72 bp GACAGGGACGCCGCATTCTGGAGGGACTCATCCAGCTaGAATAAGGTGTCCGCTGACAGAGAGGGGGTGACC +
Preference number: 6 (lower is better)
Translates to: DRDAAFWRDSSS*NKVSADREGVT
Trigger: GGTCACCCCCTCTCTGTCAGCGGACACCTTATTGCAGCTGGATGAGTCCCTCCAGAATGCGGCGTCCCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537428.2
CDS CCA 72 bp GCCTTAGCGGGCTTGGGCTGGCCAGAAGGGGTGTGCTaGGGAGTGTTGACTAGGGAGAGACATTTGTGGGGA +
Preference number: 6 (lower is better)
Translates to: ALAGLGWPEGVC*GVLTRERHLWG
Trigger: TCCCCACAAATGTCTCTCCCTAGTCAACACTCCCCAGCACACCCCTTCTGGCCAGCCCAAGCCCGCTAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS TCA 72 bp GCGAAATCATGGGTCCAGTTTCCAAGGGTACATGAGTaGGCTGAGGGGAGGTCACTGGGCTCGTTCCCGGGG +
Preference number: 6 (lower is better)
Translates to: AKSWVQFPRVHE*AEGRSLGSFPG
Trigger: CCCCGGGAACGAGCCCAGTGACCTCCCCTCAGCTCACTCATGTACCCTTGGAAACTGGACCCATGATTTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS CAA 90 bp GAGAGTCCAGAGGATGAGAGGATTCGTTGCACCTTTTGCCAGGGTTaGGGCCGGCAGTATGGACAGGGTGGTCGCTGTAACCTTGCCCGG +
Preference number: 6 (lower is better)
Translates to: ESPEDERIRCTFCQG*GRQYGQGGRCNLAR
Trigger: CCGGGCAAGGTTACAGCGACCACCCTGTCCATACTGCCGGCCCAAACCCTGGCAAAAGGTGCAACGAATCCTCTCATCCTCTGGACTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472157.1
ENST00000537428.2
CDS TCA 72 bp AGGACTAGTTTCCACCGGCCGGCGAGCAAGAGGAGGTaGAATCGTGAGGCAAGTTCCCGGGGTCCTATGTGT +
Preference number: 6 (lower is better)
Translates to: RTSFHRPASKRR*NREASSRGPMC
Trigger: ACACATAGGACCCCGGGAACTTGCCTCACGATTTCACCTCCTCTTGCTCGCCGGCCGGTGGAAACTAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS CCA 72 bp TCTACTTCCAGCAGACACTCAGGACCGCTCCAGTCATaGCTCCAGATCCTACCTGGCAGGAGGGAAGCGACT +
Preference number: 6 (lower is better)
Translates to: STSSRHSGPLQS*LQILPGRREAT
Trigger: AGTCGCTTCCCTCCTGCCAGGTAGGATCTGGAGCCATGACTGGAGCGGTCCTGAGTGTCTGCTGGAAGTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475281.1
CDS CCA 72 bp CGGAATGCTGAACTGCTCAAAATAAGGGCTGGAGAGTaGGGAACCCGAGTGGCAGGGCTAGCGGCAGTAGGT +
Preference number: 6 (lower is better)
Translates to: RNAELLKIRAGE*GTRVAGLAAVG
Trigger: ACCTACTGCCGCTAGCCCTGCCACTCGGGTTCCCCACTCTCCAGCCCTTATTTTGAGCAGTTCAGCATTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537428.2
CDS GCA 72 bp GAGAGTCCAGAGGATGAGAGGATTCGTTGCACCTTTTaGCAGGGTTTGGGCCGGCAGTATGGACAGGGTGGT +
Preference number: 6 (lower is better)
Translates to: ESPEDERIRCTF*QGLGRQYGQGG
Trigger: ACCACCCTGTCCATACTGCCGGCCCAAACCCTGGCAAAAGGTGCAACGAATCCTCTCATCCTCTGGACTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472157.1
ENST00000537428.2
CDS GCA 72 bp TGCTCCAGCTCTGACTTCTGCCATCATGGGGACTCTTaGTTTGGCTCCGGCTTTGGCTTTGGTGGGAACTCC +
Preference number: 6 (lower is better)
Translates to: CSSSDFCHHGDS*FGSGFGFGGNS
Trigger: GGAGTTCCCACCAAAGCCAAAGCCGGAGCCAAAGCAAGAGTCCCCATGATGGCAGAAGTCAGAGCTGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS CCA 72 bp TCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATTaGCAGCAAGATTGCCTGGCAGGAGGGAAGCGACTG +
Preference number: 6 (lower is better)
Translates to: SVVWLFGTGRDH*QQDCLAGGKRL
Trigger: CAGTCGCTTCCCTCCTGCCAGGCAATCTTGCTGCCAATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS CCA 72 bp AGGATGAGAGGATTCGTTGCACCTTTTGCCAGGGTTTaGGCCGGCAGTATGGACAGGGTGGTCGCTGTAACC +
Preference number: 6 (lower is better)
Translates to: RMRGFVAPFARV*AGSMDRVVAVT
Trigger: GGTTACAGCGACCACCCTGTCCATACTGCCGGCCCAAACCCTGGCAAAAGGTGCAACGAATCCTCTCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472157.1
ENST00000537428.2
CDS CCA 72 bp CATCAGCCCAGTTTCCAAAACTCTGTGAGAAAGGGTTaGGGAGGCCATAGGACTAGTTTCCACCGGCCGGCG +
Preference number: 6 (lower is better)
Translates to: HQPSFQNSVRKG*GGHRTSFHRPA
Trigger: CGCCGGCCGGTGGAAACTAGTCCTATGGCCTCCCCAACCCTTTCTCACAGAGTTTTGGAAACTGGGCTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS CCA 72 bp TGGAGGGTCCATGGCGGCTGCTCTGAGCATAACTATTaGCCGAGACAGGATCACAAGGAAGGCAGAGGGGAA +
Preference number: 6 (lower is better)
Translates to: WRVHGGCSEHNY*PRQDHKEGRGE
Trigger: TTCCCCTCTGCCTTCCTTGTGATCCTGTCTCGGCCAATAGTTATGCTCAGAGCAGCCGCCATGGACCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS CAA 72 bp GAGGATGAGAGGATTCGTTGCACCTTTTGCCAGGGTTaGGGCCGGCAGTATGGACAGGGTGGTCGCTGTAAC +
Preference number: 6 (lower is better)
Translates to: EDERIRCTFCQG*GRQYGQGGRCN
Trigger: GTTACAGCGACCACCCTGTCCATACTGCCGGCCCAAACCCTGGCAAAAGGTGCAACGAATCCTCTCATCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472157.1
ENST00000537428.2
CDS TCA 72 bp ACAGCTGGGATTGGTGCTACAGCTGGAATCCTTGGATaGAGGCAAAGGGCAGCTGTAGGGGATCTGCAGAGG +
Preference number: 6 (lower is better)
Translates to: TAGIGATAGILG*RQRAAVGDLQR
Trigger: CCTCTGCAGATCCCCTACAGCTGCCCTTTGCCTTCATCCAAGGATTCCAGCTGTAGCACCAATCCCAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS TCA 72 bp GGAAAGATGGGAGTAATGATAAGAGCCCTCCTGAGGTaGGCTGGGAGAGCCAGGCATGCCTGCCTGAGAAGA +
Preference number: 6 (lower is better)
Translates to: GKMGVMIRALLR*AGRARHACLRR
Trigger: TCTTCTCAGGCAGGCATGCCTGGCTCTCCCAGCTCACCTCAGGAGGGCTCTTATCATTACTCCCATCTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS CAA 72 bp TTCTGTAGTCTGGCTATTCGGGACGGGGAGAGATCATaGGCAGCAAGATTGCCTGGCAGGAGGGAAGCGACT +
Preference number: 6 (lower is better)
Translates to: FCSLAIRDGERS*AARLPGRREAT
Trigger: AGTCGCTTCCCTCCTGCCAGGCAATCTTGCTGCCAATGATCTCTCCCCGTCCCGAATAGCCAGACTACAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307089.7
CDS GCA 72 bp AGAAGCAAGGAGAGTCCAGAGGATGAGAGGATTCGTTaGACCTTTTGCCAGGGTTTGGGCCGGCAGTATGGA +
Preference number: 6 (lower is better)
Translates to: RSKESPEDERIR*TFCQGLGRQYG
Trigger: TCCATACTGCCGGCCCAAACCCTGGCAAAAGGTGCAACGAATCCTCTCATCCTCTGGACTCTCCTTGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472157.1
ENST00000537428.2
CDS TCA 72 bp AAGGGGAAAGGAGGTTGCCGGGCTGGTTCCAAAAGCTaGAGGCCATCCGCTAGAGTAACAGAGATTAGTGTG +
Preference number: 6 (lower is better)
Translates to: KGKGGCRAGSKS*RPSARVTEISV
Trigger: CACACTAATCTCTGTTACTCTAGCGGATGGCCTTCAGCTTTTGGAACCAGCCCGGCAACCTCCTTTCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS CCA 72 bp GCAAAGCCAGTCGAACAGCAGGGAATTTGGGCTCTGTaGCAGCCTAAAAGAGAGAGGACAGGCCATTTCTTC +
Preference number: 6 (lower is better)
Translates to: AKPVEQQGIWAL*QPKRERTGHFF
Trigger: GAAGAAATGGCCTGTCCTCTCTCTTTTAGGCTGCCACAGAGCCCAAATTCCCTGCTGTTCGACTGGCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486270.5
CDS CCA 72 bp AACTACAGCTGGGATTGGTGCTACAGCTGGAATCCTTaGATGAAGGCAAAGGGCAGCTGTAGGGGATCTGCA +
Preference number: 6 (lower is better)
Translates to: NYSWDWCYSWNP*MKAKGSCRGSA
Trigger: TGCAGATCCCCTACAGCTGCCCTTTGCCTTCATCCAAGGATTCCAGCTGTAGCACCAATCCCAGCTGTAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS CCA 72 bp GGACAGTATCAGGGTAGGCCCGGACTCGGGGGACAATaGGTAAACTTTGAGGATCAAAGGGTGTTCTCAAAG +
Preference number: 6 (lower is better)
Translates to: GQYQGRPGLGGQ*VNFEDQRVFSK
Trigger: CTTTGAGAACACCCTTTGATCCTCAAAGTTTACCCATTGTCCCCCGAGTCCGGGCCTACCCTGATACTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS CAA 90 bp ATTTATGCTAAGTTGGGGACTCTCACTCTGGCCCTGACTTGTGTTTaGTTGAGGATTACTGCTCCGGCCCCAGCTTCTGCTAGGATAGGG +
Preference number: 6 (lower is better)
Translates to: IYAKLGTLTLALTCV*LRITAPAPASARIG
Trigger: CCCTATCCTAGCAGAAGCTGGGGCCGGAGCAGTAATCCTCAACAAAACACAAGTCAGGGCCAGAGTGAGAGTCCCCAACTTAGCATAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS GCA 72 bp TTGGGGCTGGAATTTGAAGGAGTTGTGATGTATGGCTaGATACAAGAAGGACCAGAGAGGCAGGAGGGAGGT +
Preference number: 6 (lower is better)
Translates to: LGLEFEGVVMYG*IQEGPERQEGG
Trigger: ACCTCCCTCCTGCCTCTCTGGTCCTTCTTGTATGCAGCCATACATCACAACTCCTTCAAATTCCAGCCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS CAA 90 bp TGGCTTTGGTGGGAACTCCTGCTCTCGCTGTCACTACTCTGGCATTaGCTAATAATAGTCGAACTACAGCTGGGATTGGTGCTACAGCTG +
Preference number: 6 (lower is better)
Translates to: WLWWELLLSLSLLWH*LIIVELQLGLVLQL
Trigger: CAGCTGTAGCACCAATCCCAGCTGTAGTTCGACTATTATTAGCAAATGCCAGAGTAGTGACAGCGAGAGCAGGAGTTCCCACCAAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS CAA 90 bp GCTCTAGGGACCACAGTCAGTAAGGTAGTCCCTGGGGGAAGTTCTTaGGGGCTGGAATTTGAAGGAGTTGTGATGTATGGCTGCATACAA +
Preference number: 6 (lower is better)
Translates to: ALGTTVSKVVPGGSS*GLEFEGVVMYGCIQ
Trigger: TTGTATGCAGCCATACATCACAACTCCTTCAAATTCCAGCCCCAAAGAACTTCCCCCAGGGACTACCTTACTGACTGTGGTCCCTAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS CAA 72 bp ACCACAGTCAGTAAGGTAGTCCCTGGGGGAAGTTCTTaGGGGCTGGAATTTGAAGGAGTTGTGATGTATGGC +
Preference number: 6 (lower is better)
Translates to: TTVSKVVPGGSS*GLEFEGVVMYG
Trigger: GCCATACATCACAACTCCTTCAAATTCCAGCCCCAAAGAACTTCCCCCAGGGACTACCTTACTGACTGTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS CCA 72 bp CTTTGGTGGGAACTCCTGCTCTCGCTGTCACTACTCTaGCATTTGCTAATAATAGTCGAACTACAGCTGGGA +
Preference number: 6 (lower is better)
Translates to: LWWELLLSLSLL*HLLIIVELQLG
Trigger: TCCCAGCTGTAGTTCGACTATTATTAGCAAATGCCAGAGTAGTGACAGCGAGAGCAGGAGTTCCCACCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS CAA 72 bp TGGGAACTCCTGCTCTCGCTGTCACTACTCTGGCATTaGCTAATAATAGTCGAACTACAGCTGGGATTGGTG +
Preference number: 6 (lower is better)
Translates to: WELLLSLSLLWH*LIIVELQLGLV
Trigger: CACCAATCCCAGCTGTAGTTCGACTATTATTAGCAAATGCCAGAGTAGTGACAGCGAGAGCAGGAGTTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS CAA 72 bp CAACAATTTTTCTCAAGGGGCAGGTCAAGCTGTGGTTaGGGTTCACAAGAGTCTAGAGGCTTAAGGCTGCCA +
Preference number: 6 (lower is better)
Translates to: QQFFSRGRSSCG*GSQESRGLRLP
Trigger: TGGCAGCCTTAAGCCTCTAGACTCTTGTGAACCCAAACCACAGCTTGACCTGCCCCTTGAGAAAAATTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498008.5
CDS CAA 90 bp TCACTACTCTGGCATTTGCTAATAATAGTCGAACTACAGCTGGGATaGGTGCTACAGCTGGAATCCTTGGATGAAGGCAAAGGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: SLLWHLLIIVELQLG*VLQLESLDEGKGQL
Trigger: CAGCTGCCCTTTGCCTTCATCCAAGGATTCCAGCTGTAGCACCAATCCCAGCTGTAGTTCGACTATTATTAGCAAATGCCAGAGTAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5
CDS CCA 72 bp CAAAATTCTGCAAAGCCAGTCGAACAGCAGGGAATTTaGGCTCTGTGGCAGCCCATTTCTTCTTATATCGAT +
Preference number: 6 (lower is better)
Translates to: QNSAKPVEQQGI*ALWQPISSYID
Trigger: ATCGATATAAGAAGAAATGGGCTGCCACAGAGCCCAAATTCCCTGCTGTTCGACTGGCTTTGCAGAATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307089.7
ENST00000474844.6
CDS CAA 72 bp TGGCATTTGCTAATAATAGTCGAACTACAGCTGGGATaGGTGCTACAGCTGGAATCCTTGGATGAAGGCAAA +
Preference number: 6 (lower is better)
Translates to: WHLLIIVELQLG*VLQLESLDEGK
Trigger: TTTGCCTTCATCCAAGGATTCCAGCTGTAGCACCAATCCCAGCTGTAGTTCGACTATTATTAGCAAATGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495427.1
ENST00000498008.5