RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NSMF (Homo sapiens)

Ensembl gene IDs: ENSG00000165802

Ensembl transcript IDs: ENST00000265663.12, ENST00000371468.1, ENST00000371472.6, ENST00000371473.7, ENST00000371474.7, ENST00000371475.9, ENST00000371482.5, ENST00000437259.5, ENST00000482448.1, ENST00000484316.5

Found 751 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGCCACAGGGCGGGATCCTCCCGGCCCCCAGGGACTGCAGCCTCTaGGGCCACGGGTGCAGCGAGGACCGGAACCCACAGGGGGAACCT +
Preference number: 1 (lower is better)
Translates to: GPQGGILPAPRDCSL*GHGCSEDRNPQGEP
Trigger: AGGTTCCCCCTGTGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAGGCTGCAGTCCCTGGGGGCCGGGAGGATCCCGCCCTGTGGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR GCA 90 bp CGACAGCCCATCCTGCTGGCCGTGGACAAAAGCTGGGAGCTCCTGTaGCCAGTCAGGAGCCCCTACAGTCCACCAGCTGCGCGGCCGGGT +
Preference number: 1 (lower is better)
Translates to: RQPILLAVDKSWELL*PVRSPYSPPAARPG
Trigger: ACCCGGCCGCGCAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGTCCACGGCCAGCAGGATGGGCTGTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR GCA 90 bp AGCGAGGACCGGAACCCACAGGGGGAACCTGAGCAACGTCTGAGGTaGCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACACAGTCCCGG +
Preference number: 1 (lower is better)
Translates to: SEDRNPQGEPEQRLR*PEVAPGETGATQSR
Trigger: CCGGGACTGTGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGGTTCCCCCTGTGGGTTCCGGTCCTCGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR TCA 90 bp GGTGCAGCGAGGACCGGAACCCACAGGGGGAACCTGAGCAACGTCTaGGGTGCCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACACAGT +
Preference number: 1 (lower is better)
Translates to: GAARTGTHRGNLSNV*GALKWLQARPEPHS
Trigger: ACTGTGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGGTTCCCCCTGTGGGTTCCGGTCCTCGCTGCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR CCA 90 bp CAGCTATATACACGACAGCCCATCCTGCTGGCCGTGGACAAAAGCTaGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCT +
Preference number: 1 (lower is better)
Translates to: QLYTRQPILLAVDKS*ELLCPVRSPYSPPA
Trigger: AGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTGTATATAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR GCA 90 bp GGGGGTGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATaGCCACAGCTGAGCCTCCAGGCGAGGCATGGCAGGTCAGTGCCT +
Preference number: 1 (lower is better)
Translates to: GGVEIALISMNPMEG*PQLSLQARHGRSVP
Trigger: AGGCACTGACCTGCCATGCCTCGCCTGGAGGCTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR GCA 90 bp CAAGAAATGCTGCTTCCCTTTGAATTGTTTCGGGGGTGTAGAAATTaGACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAG +
Preference number: 1 (lower is better)
Translates to: QEMLLPFELFRGCRN*TYFYEPHGGMPTAE
Trigger: CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACACCCCCGAAACAATTCAAAGGGAAGCAGCATTTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR CCA 90 bp GACAGAGCCAGGCTGGGCAGCCCGGCGACGCTGGCCCCACGCACACGGGCCACCGGGCTGCTGGGCTGCTaGGCCGGGGTGCCTACACTG +
Preference number: 2 (lower is better)
Translates to: DRARLGSPATLAPRTRATGLLGC*AGVPTL
Trigger: CAGTGTAGGCACCCCGGCCCAGCAGCCCAGCAGCCC...GGTGGCCCGTGTGCGTGGGGCCAGCGTCGCCGGGCTGCCCAGCCTGGCTCTGTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR GCA 90 bp GTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCGGCCCTCTGCGGCCACGGGTaGAGCGAGGACCGGAACCCA +
Preference number: 2 (lower is better)
Translates to: VSAWPLSIHGPQGGILPALCGHG*SEDRNP
Trigger: TGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAG...GGCCGGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR GCA 90 bp GCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGAGGGGGCTCTGCGGCCACGGGTaGAGCGAGGACCGGAACCCA +
Preference number: 2 (lower is better)
Translates to: APRTRATLVLVIDTAGRGLCGHG*SEDRNP
Trigger: TGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAG...CCCCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR TCA 90 bp GACAGAGCCAGGCTGGGCAGCCCGGCGACGCTGGCCCCACGCACACGGGCCACCAACCTGAGCAACGTCTaGGGTGCCCTGAAGTGGCTC +
Preference number: 2 (lower is better)
Translates to: DRARLGSPATLAPRTRATNLSNV*GALKWL
Trigger: GAGCCACTTCAGGGCACCTCAGACGTTGCTCAGGTT...GGTGGCCCGTGTGCGTGGGGCCAGCGTCGCCGGGCTGCCCAGCCTGGCTCTGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR TCA 90 bp GCAGGTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCCCCACAGGGGGAACCTaGGCAACGTCTGAGGTGCCC +
Preference number: 2 (lower is better)
Translates to: AGQCLAAEHPRATGRDPPPTGGT*ATSEVP
Trigger: GGGCACCTCAGACGTTGCTCAGGTTCCCCCTGTGGG...GGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGACCTGC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR CCA 90 bp GCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGAGGGGGCCGGTGCAGAGGGAGTaGCCTGATGGTGACTGGGCG +
Preference number: 2 (lower is better)
Translates to: APRTRATLVLVIDTAGRGPVQRE*PDGDWA
Trigger: CGCCCAGTCACCATCAGGCCACTCCCTCTGCACCGG...CCCCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR CCA 90 bp GACGCTGGCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGCCTCCAGGCGAGGCATaGCAGGTCAGTGCCTGGCCG +
Preference number: 2 (lower is better)
Translates to: DAGPTHTGHPGAGDRYGRPPGEA*QVSAWP
Trigger: CGGCCAGGCACTGACCTGCCATGCCTCGCCTGGAGG...CCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGCCAGCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR TCA 90 bp GACGCTGGCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGCCCACAGGGGGAACCTaGGCAACGTCTGAGGTGCCC +
Preference number: 2 (lower is better)
Translates to: DAGPTHTGHPGAGDRYGRPTGGT*ATSEVP
Trigger: GGGCACCTCAGACGTTGCTCAGGTTCCCCCTGTGGG...CCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGCCAGCGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR TCA 90 bp GACGCTGGCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGGGCAGGGAGGGTCCTaGACACATGTGGGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: DAGPTHTGHPGAGDRYGRGQGGS*THVGCW
Trigger: CCAGCAGCCCACATGTGTTCAGGACCCTCCCTGCCC...CCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGCCAGCGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR GCA 90 bp CCCCTGGAAAGCACTGAGAGGACAGACCCACGCGGCGGCCGCGGTGGAGGATCAAGGGACTGCAGCCTCTaGGGCCACGGGTGCAGCGAG +
Preference number: 2 (lower is better)
Translates to: PLESTERTDPRGGRGGGSRDCSL*GHGCSE
Trigger: CTCGCTGCACCCGTGGCCGCAGAGGCTGCAGTCCCT...TGATCCTCCACCGCGGCCGCCGCGTGGGTCTGTCCTCTCAGTGCTTTCCAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR CCA 90 bp CACACAGTGTGGCGTGAGGGACATACAGCCCTCTCCCTGGTGCCCTCAGGCGGCGGGCTGCTGGGCTGCTaGGCCGGGGTGCCTACACTG +
Preference number: 2 (lower is better)
Translates to: HTVWREGHTALSLVPSGGGLLGC*AGVPTL
Trigger: CAGTGTAGGCACCCCGGCCCAGCAGCCCAGCAGCCC...GCCGCCTGAGGGCACCAGGGAGAGGGCTGTATGTCCCTCACGCCACACTGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR TCA 90 bp CACACAGTGTGGCGTGAGGGACATACAGCCCTCTCCCTGGTGCCCTCAGGCGGCTCAGTGCCTGGCCGCTaGGCATCCACGGGCCACAGG +
Preference number: 2 (lower is better)
Translates to: HTVWREGHTALSLVPSGGSVPGR*ASTGHR
Trigger: CCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGA...GCCGCCTGAGGGCACCAGGGAGAGGGCTGTATGTCCCTCACGCCACACTGTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR TCA 90 bp GCAGGAAGGCCCTGCAGCAGTGACCTCACAGGAGTGGGCCCAGAAGCTGGGCACACCCAGAGCCTCCTCTaGAGGAGGGGACGCTGCGCC +
Preference number: 2 (lower is better)
Translates to: AGRPCSSDLTGVGPEAGHTQSLL*RRGRCA
Trigger: GGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGT...GTGCCCAGCTTCTGGGCCCACTCCTGTGAGGTCACTGCTGCAGGGCCTTCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR GCA 90 bp CCCCACCCAGAGCCTCCTCTGAAGGAGGGGACGCTGCGCCCTTCCTTCCTGCTGAGCCCCAGGTCCCGGTaGAGAGGGAGTGGCCTGATG +
Preference number: 2 (lower is better)
Translates to: PHPEPPLKEGTLRPSFLLSPRSR*RGSGLM
Trigger: CATCAGGCCACTCCCTCTGCACCGGGACCTGGGGCT...CAGCAGGAAGGAAGGGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR CCA 90 bp CCCCACCCAGAGCCTCCTCTGAAGGAGGGGACGCTGCGCCCTTCCTTCCTGCTGCCGGTGCAGAGGGAGTaGCCTGATGGTGACTGGGCG +
Preference number: 2 (lower is better)
Translates to: PHPEPPLKEGTLRPSFLLPVQRE*PDGDWA
Trigger: CGCCCAGTCACCATCAGGCCACTCCCTCTGCACCGG...CAGCAGGAAGGAAGGGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR CCA 90 bp CCCCTGGAAAGCACTGAGAGGACAGACCCACGCGGCGGCCGCGGTGGAGGATCATGGCAGGTCAGTGCCTaGCCGCTGAGCATCCACGGG +
Preference number: 2 (lower is better)
Translates to: PLESTERTDPRGGRGGGSWQVSA*PLSIHG
Trigger: CCCGTGGATGCTCAGCGGCCAGGCACTGACCTGCCA...TGATCCTCCACCGCGGCCGCCGCGTGGGTCTGTCCTCTCAGTGCTTTCCAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR TCA 90 bp GCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGAGGGGGAACCTGAGCAACGTCTaGGGTGCCCTGAAGTGGCTC +
Preference number: 2 (lower is better)
Translates to: APRTRATLVLVIDTAGRGNLSNV*GALKWL
Trigger: GAGCCACTTCAGGGCACCTCAGACGTTGCTCAGGTT...CCCCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR GCA 90 bp GGCCTAGCTCCAACTCTGTCCAGGCAGGAAGGCCCTGCAGCAGTGACCTCACAGCTACAGTCCACCAGCTaGGCGGCCGGGTCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: GLAPTLSRQEGPAAVTSQLQSTS*AAGSRG
Trigger: GCCCCTGGACCCGGCCGCGCAGCTGGTGGACTGTAG...CTGTGAGGTCACTGCTGCAGGGCCTTCCTGCCTGGACAGAGTTGGAGCTAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR GCA 90 bp CCCCTGGAAAGCACTGAGAGGACAGACCCACGCGGCGGCCGCGGTGGAGGATCAAGCTGGGAGCTCCTGTaGCCAGTCAGGAGCCCCTAC +
Preference number: 2 (lower is better)
Translates to: PLESTERTDPRGGRGGGSSWELL*PVRSPY
Trigger: GTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCT...TGATCCTCCACCGCGGCCGCCGCGTGGGTCTGTCCTCTCAGTGCTTTCCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR CCA 90 bp GCAGGAAGGCCCTGCAGCAGTGACCTCACAGGAGTGGGCCCAGAAGCTGGGCACCAGCCCTCCCTCAGCTaGGAACACAGCCAGGTGCCC +
Preference number: 2 (lower is better)
Translates to: AGRPCSSDLTGVGPEAGHQPSLS*EHSQVP
Trigger: GGGCACCTGGCTGTGTTCCCAGCTGAGGGAGGGCTG...GTGCCCAGCTTCTGGGCCCACTCCTGTGAGGTCACTGCTGCAGGGCCTTCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR GCA 90 bp CCTGAGCAACGTCTGAGGTGCCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACAAGCCCCAGGTCCCGGTaGAGAGGGAGTGGCCTGATG +
Preference number: 2 (lower is better)
Translates to: PEQRLRCPEVAPGETGATSPRSR*RGSGLM
Trigger: CATCAGGCCACTCCCTCTGCACCGGGACCTGGGGCT...TGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR GCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGTCCTGCTGCCCAGACTaGCCCTACCGGGTCCGGCGC +
Preference number: 2 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLSCCPD*PYRVRR
Trigger: GCGCCGGACCCGGTAGGGGCAGTCTGGGCAGCAGGA...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR TCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGTCAGTGCCTGGCCGCTaGGCATCCACGGGCCACAGG +
Preference number: 2 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLSVPGR*ASTGHR
Trigger: CCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGA...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR TCA 90 bp GGCCTAGCTCCAACTCTGTCCAGGCAGGAAGGCCCTGCAGCAGTGACCTCACAGCCACCCTGGTGCTGGTaGTCGATACGGCAGGGAGGG +
Preference number: 2 (lower is better)
Translates to: GLAPTLSRQEGPAAVTSQPPWCW*SIRQGG
Trigger: CCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGG...CTGTGAGGTCACTGCTGCAGGGCCTTCCTGCCTGGACAGAGTTGGAGCTAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR TCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGACCCAGAGCCTCCTCTaGAGGAGGGGACGCTGCGCC +
Preference number: 2 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLTQSLL*RRGRCA
Trigger: GGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGT...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR GCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGTGTGGGCTGCTGGGCTaGTGGGCCGGGGTGCCTACA +
Preference number: 2 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLCGLLG*WAGVPT
Trigger: TGTAGGCACCCCGGCCCAGCAGCCCAGCAGCCCACA...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR GCA 90 bp CCCTCGCCCCAGCTATATACACGACAGCCCATCCTGCTGGCCGTGGACAAAAGCTGTGGGCTGCTGGGCTaGTGGGCCGGGGTGCCTACA +
Preference number: 2 (lower is better)
Translates to: PSPQLYTRQPILLAVDKSCGLLG*WAGVPT
Trigger: TGTAGGCACCCCGGCCCAGCAGCCCAGCAGCCCACA...GCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTGTATATAGCTGGGGCGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR CCA 90 bp GGCCTAGCTCCAACTCTGTCCAGGCAGGAAGGCCCTGCAGCAGTGACCTCACAGCCGGTGCAGAGGGAGTaGCCTGATGGTGACTGGGCG +
Preference number: 2 (lower is better)
Translates to: GLAPTLSRQEGPAAVTSQPVQRE*PDGDWA
Trigger: CGCCCAGTCACCATCAGGCCACTCCCTCTGCACCGG...CTGTGAGGTCACTGCTGCAGGGCCTTCCTGCCTGGACAGAGTTGGAGCTAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR CCA 90 bp CCCTCGCCCCAGCTATATACACGACAGCCCATCCTGCTGGCCGTGGACAAAAGCCCTCCAGGCGAGGCATaGCAGGTCAGTGCCTGGCCG +
Preference number: 2 (lower is better)
Translates to: PSPQLYTRQPILLAVDKSPPGEA*QVSAWP
Trigger: CGGCCAGGCACTGACCTGCCATGCCTCGCCTGGAGG...GCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTGTATATAGCTGGGGCGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR CCA 90 bp CCCTCGCCCCAGCTATATACACGACAGCCCATCCTGCTGGCCGTGGACAAAAGCACACATGTGGGCTGCTaGGCTGCTGGGCCGGGGTGC +
Preference number: 2 (lower is better)
Translates to: PSPQLYTRQPILLAVDKSTHVGC*AAGPGC
Trigger: GCACCCCGGCCCAGCAGCCCAGCAGCCCACATGTGT...GCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTGTATATAGCTGGGGCGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR CCA 90 bp CACACAGTGTGGCGTGAGGGACATACAGCCCTCTCCCTGGTGCCCTCAGGCGGCGCCGTGGACAAAAGCTaGGAGCTCCTGTGCCCAGTC +
Preference number: 2 (lower is better)
Translates to: HTVWREGHTALSLVPSGGAVDKS*ELLCPV
Trigger: GACTGGGCACAGGAGCTCCCAGCTTTTGTCCACGGC...GCCGCCTGAGGGCACCAGGGAGAGGGCTGTATGTCCCTCACGCCACACTGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR CCA 90 bp CACACAGTGTGGCGTGAGGGACATACAGCCCTCTCCCTGGTGCCCTCAGGCGGCCCATCCTGCTGGCCGTaGACAAAAGCTGGGAGCTCC +
Preference number: 2 (lower is better)
Translates to: HTVWREGHTALSLVPSGGPSCWP*TKAGSS
Trigger: GGAGCTCCCAGCTTTTGTCCACGGCCAGCAGGATGG...GCCGCCTGAGGGCACCAGGGAGAGGGCTGTATGTCCCTCACGCCACACTGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR CCA 90 bp GCAGGAAGGCCCTGCAGCAGTGACCTCACAGGAGTGGGCCCAGAAGCTGGGCACACGCGGCGGCCGCGGTaGAGGATCAGGTTTAATGGT +
Preference number: 2 (lower is better)
Translates to: AGRPCSSDLTGVGPEAGHTRRPR*RIRFNG
Trigger: ACCATTAAACCTGATCCTCCACCGCGGCCGCCGCGT...GTGCCCAGCTTCTGGGCCCACTCCTGTGAGGTCACTGCTGCAGGGCCTTCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR CCA 90 bp CACACAGTGTGGCGTGAGGGACATACAGCCCTCTCCCTGGTGCCCTCAGGCGGCGTGACCTCACAGGAGTaGGCCCAGAAGCTGGGCACA +
Preference number: 2 (lower is better)
Translates to: HTVWREGHTALSLVPSGGVTSQE*AQKLGT
Trigger: TGTGCCCAGCTTCTGGGCCCACTCCTGTGAGGTCAC...GCCGCCTGAGGGCACCAGGGAGAGGGCTGTATGTCCCTCACGCCACACTGTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR TCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGGGGTCCGGCGCCGGCTaGGGTCTAAGTAAGCAGGGA +
Preference number: 2 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLGSGAG*GLSKQG
Trigger: TCCCTGCTTACTTAGACCTCAGCCGGCGCCGGACCC...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR TCA 90 bp AATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCGCCCCAGCGGGTCCGGCGCCGGCTaGGGTCTAAGTAAGCAGGGA +
Preference number: 2 (lower is better)
Translates to: NGHYEGIVHRSKPGPRPSGSGAG*GLSKQG
Trigger: TCCCTGCTTACTTAGACCTCAGCCGGCGCCGGACCC...GCTGGGGCGGGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR GCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGAGCCCCAGGTCCCGGTaGAGAGGGAGTGGCCTGATG +
Preference number: 2 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLSPRSR*RGSGLM
Trigger: CATCAGGCCACTCCCTCTGCACCGGGACCTGGGGCT...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR CCA 90 bp AATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCGCCCCAGCTGGCAGGTCAGTGCCTaGCCGCTGAGCATCCACGGG +
Preference number: 2 (lower is better)
Translates to: NGHYEGIVHRSKPGPRPSWQVSA*PLSIHG
Trigger: CCCGTGGATGCTCAGCGGCCAGGCACTGACCTGCCA...GCTGGGGCGGGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR CCA 90 bp GCAGGAAGGCCCTGCAGCAGTGACCTCACAGGAGTGGGCCCAGAAGCTGGGCACTCCAGGGGCCCACTGTaGTGCCAGCGAGTTTCTCAA +
Preference number: 2 (lower is better)
Translates to: AGRPCSSDLTGVGPEAGHSRGPL*CQRVSQ
Trigger: TTGAGAAACTCGCTGGCACCACAGTGGGCCCCTGGA...GTGCCCAGCTTCTGGGCCCACTCCTGTGAGGTCACTGCTGCAGGGCCTTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR GCA 90 bp GCAGGAAGGCCCTGCAGCAGTGACCTCACAGGAGTGGGCCCAGAAGCTGGGCACAGGGGCCCACTGTGGTaGCAGCGAGTTTCTCAAAAC +
Preference number: 2 (lower is better)
Translates to: AGRPCSSDLTGVGPEAGHRGPLW*QRVSQN
Trigger: GTTTTGAGAAACTCGCTGGCACCACAGTGGGCCCCT...GTGCCCAGCTTCTGGGCCCACTCCTGTGAGGTCACTGCTGCAGGGCCTTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR CCA 90 bp AATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCGCCCCAGCGCCGTGGACAAAAGCTaGGAGCTCCTGTGCCCAGTC +
Preference number: 2 (lower is better)
Translates to: NGHYEGIVHRSKPGPRPSAVDKS*ELLCPV
Trigger: GACTGGGCACAGGAGCTCCCAGCTTTTGTCCACGGC...GCTGGGGCGGGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR GCA 90 bp AGGAGTGTAAGTGAAAGCACAGACAGTCGGAGACTCGGCCAGTGTAGACAGACCCTCTGCGGCCACGGGTaGAGCGAGGACCGGAACCCA +
Preference number: 2 (lower is better)
Translates to: RSVSESTDSRRLGQCRQTLCGHG*SEDRNP
Trigger: TGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAG...GGTCTGTCTACACTGGCCGAGTCTCCGACTGTCTGTGCTTTCACTTACACTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR GCA 90 bp GGCCTAGCTCCAACTCTGTCCAGGCAGGAAGGCCCTGCAGCAGTGACCTCACAGAGGGGCCCACTGTGGTaGCAGCGAGTTTCTCAAAAC +
Preference number: 2 (lower is better)
Translates to: GLAPTLSRQEGPAAVTSQRGPLW*QRVSQN
Trigger: GTTTTGAGAAACTCGCTGGCACCACAGTGGGCCCCT...CTGTGAGGTCACTGCTGCAGGGCCTTCCTGCCTGGACAGAGTTGGAGCTAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR TCA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCTCAGTGCCTGGCCGCTaGGCATCCACGGGCCACAGG +
Preference number: 2 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPSVPGR*ASTGHR
Trigger: CCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGA...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR TCA 90 bp AGGAGTGTAAGTGAAAGCACAGACAGTCGGAGACTCGGCCAGTGTAGACAGACCGGGCAGGGAGGGTCCTaGACACATGTGGGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: RSVSESTDSRRLGQCRQTGQGGS*THVGCW
Trigger: CCAGCAGCCCACATGTGTTCAGGACCCTCCCTGCCC...GGTCTGTCTACACTGGCCGAGTCTCCGACTGTCTGTGCTTTCACTTACACTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR GCA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCTCTGCGGCCACGGGTaGAGCGAGGACCGGAACCCA +
Preference number: 2 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPLCGHG*SEDRNP
Trigger: TGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAG...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR GCA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCAGGGACTGCAGCCTCTaGGGCCACGGGTGCAGCGAG +
Preference number: 2 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPRDCSL*GHGCSE
Trigger: CTCGCTGCACCCGTGGCCGCAGAGGCTGCAGTCCCT...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR CCA 90 bp AATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCGCCCCAGCCTAAGTAAGCAGGGATaGGGGGTGGCAAGAGGAGTG +
Preference number: 2 (lower is better)
Translates to: NGHYEGIVHRSKPGPRPSLSKQG*GVARGV
Trigger: CACTCCTCTTGCCACCCCCCATCCCTGCTTACTTAG...GCTGGGGCGGGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR TCA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCGGGCAGGGAGGGTCCTaGACACATGTGGGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPGQGGS*THVGCW
Trigger: CCAGCAGCCCACATGTGTTCAGGACCCTCCCTGCCC...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR TCA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCCACCCTGGTGCTGGTaGTCGATACGGCAGGGAGGG +
Preference number: 2 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPPPWCW*SIRQGG
Trigger: CCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGG...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR GCA 90 bp AGGAGTGTAAGTGAAAGCACAGACAGTCGGAGACTCGGCCAGTGTAGACAGACCGAGCAACGTCTGAGGTaGCCTGAAGTGGCTCCAGGC +
Preference number: 2 (lower is better)
Translates to: RSVSESTDSRRLGQCRQTEQRLR*PEVAPG
Trigger: GCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTC...GGTCTGTCTACACTGGCCGAGTCTCCGACTGTCTGTGCTTTCACTTACACTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR GCA 90 bp TGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAGCTCTGCGGCCACGGGTaGAGCGAGGACCGGAACCCA +
Preference number: 2 (lower is better)
Translates to: CRNCTYFYEPHGGMPTAELCGHG*SEDRNP
Trigger: TGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAG...CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR CCA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCCATCCTGCTGGCCGTaGACAAAAGCTGGGAGCTCC +
Preference number: 2 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPPSCWP*TKAGSS
Trigger: GGAGCTCCCAGCTTTTGTCCACGGCCAGCAGGATGG...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR CCA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCGACAGCCCATCCTGCTaGCCGTGGACAAAAGCTGGG +
Preference number: 2 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPDSPSC*PWTKAG
Trigger: CCCAGCTTTTGTCCACGGCCAGCAGGATGGGCTGTC...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR GCA 90 bp TGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAGAGCCCCAGGTCCCGGTaGAGAGGGAGTGGCCTGATG +
Preference number: 2 (lower is better)
Translates to: CRNCTYFYEPHGGMPTAESPRSR*RGSGLM
Trigger: CATCAGGCCACTCCCTCTGCACCGGGACCTGGGGCT...CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR TCA 90 bp TGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAGAACCTGAGCAACGTCTaGGGTGCCCTGAAGTGGCTC +
Preference number: 2 (lower is better)
Translates to: CRNCTYFYEPHGGMPTAENLSNV*GALKWL
Trigger: GAGCCACTTCAGGGCACCTCAGACGTTGCTCAGGTT...CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR TCA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCTTGCACTTATTTCTATaGACCCCATGGAGGGATGCC +
Preference number: 2 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPLHLFL*TPWRDA
Trigger: GGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAA...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR GCA 72 bp AGGGGACGCTGCGCCCTTCCTTCCTGCTGCCCAGACTaGCCCTACCGGGTCCGGCGCCGGCTGAGGTCTAAG +
Preference number: 3 (lower is better)
Translates to: RGRCALPSCCPD*PYRVRRRLRSK
Trigger: CTTAGACCTCAGCCGGCGCCGGACCCGGTAGGGGCAGTCTGGGCAGCAGGAAGGAAGGGCGCAGCGTCCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR CCA 72 bp GCTGAGCCTCCAGGCGAGGCATGGCAGGTCAGTGCCTaGCCGCTGAGCATCCACGGGCCACAGGGCGGGATC +
Preference number: 3 (lower is better)
Translates to: AEPPGEAWQVSA*PLSIHGPQGGI
Trigger: GATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGACCTGCCATGCCTCGCCTGGAGGCTCAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR CCA 72 bp TCCACCAGCTGCGCGGCCGGGTCCAGGGGCCCACTGTaGTGCCAGCGAGTTTCTCAAAACCCAGGGCCCAGC +
Preference number: 3 (lower is better)
Translates to: STSCAAGSRGPL*CQRVSQNPGPS
Trigger: GCTGGGCCCTGGGTTTTGAGAAACTCGCTGGCACCACAGTGGGCCCCTGGACCCGGCCGCGCAGCTGGTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR TCA 72 bp AGGACCGGAACCCACAGGGGGAACCTGAGCAACGTCTaGGGTGCCCTGAAGTGGCTCCAGGCGAGACCGGAG +
Preference number: 3 (lower is better)
Translates to: RTGTHRGNLSNV*GALKWLQARPE
Trigger: CTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGGTTCCCCCTGTGGGTTCCGGTCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR GCA 72 bp CGGAACCCACAGGGGGAACCTGAGCAACGTCTGAGGTaGCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACA +
Preference number: 3 (lower is better)
Translates to: RNPQGEPEQRLR*PEVAPGETGAT
Trigger: TGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGGTTCCCCCTGTGGGTTCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR CAA 90 bp GACAGAGCCAGGCTGGGCAGCCCGGCGACGCTGGCCCCACGCACACGGGCCACCAAATGCTGCTTCCCTTaGAATTGTTTCGGGGGTGTA +
Preference number: 3 (lower is better)
Translates to: DRARLGSPATLAPRTRATKCCFP*NCFGGV
Trigger: TACACCCCCGAAACAATTCAAAGGGAAGCAGCATTT...GGTGGCCCGTGTGCGTGGGGCCAGCGTCGCCGGGCTGCCCAGCCTGGCTCTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR CCA 72 bp CTCCTGTGCTGGTCCCCCTGGCTATGCCCTGTGGGGTaGTCTAGTGGCCTAGCTCCAACTCTGTCCAGGCAG +
Preference number: 3 (lower is better)
Translates to: LLCWSPWLCPVG*SSGLAPTLSRQ
Trigger: CTGCCTGGACAGAGTTGGAGCTAGGCCACTAGACCACCCCACAGGGCATAGCCAGGGGGACCAGCACAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR CCA 72 bp ACACGACAGCCCATCCTGCTGGCCGTGGACAAAAGCTaGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGT +
Preference number: 3 (lower is better)
Translates to: TRQPILLAVDKS*ELLCPVRSPYS
Trigger: ACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR CCA 72 bp CCTCGCCCCAGCTATATACACGACAGCCCATCCTGCTaGCCGTGGACAAAAGCTGGGAGCTCCTGTGCCCAG +
Preference number: 3 (lower is better)
Translates to: PRPSYIHDSPSC*PWTKAGSSCAQ
Trigger: CTGGGCACAGGAGCTCCCAGCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTGTATATAGCTGGGGCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR CAA 90 bp GACGCTGGCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGAAATGCTGCTTCCCTTaGAATTGTTTCGGGGGTGTA +
Preference number: 3 (lower is better)
Translates to: DAGPTHTGHPGAGDRYGRKCCFP*NCFGGV
Trigger: TACACCCCCGAAACAATTCAAAGGGAAGCAGCATTT...CCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGCCAGCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR CCA 72 bp CCCAGCTATATACACGACAGCCCATCCTGCTGGCCGTaGACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGA +
Preference number: 3 (lower is better)
Translates to: PSYIHDSPSCWP*TKAGSSCAQSG
Trigger: TCCTGACTGGGCACAGGAGCTCCCAGCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTGTATATAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR CAA 90 bp CACACAGTGTGGCGTGAGGGACATACAGCCCTCTCCCTGGTGCCCTCAGGCGGCCTGCTTCCCTTTGAATaGTTTCGGGGGTGTAGAAAT +
Preference number: 3 (lower is better)
Translates to: HTVWREGHTALSLVPSGGLLPFE*FRGCRN
Trigger: ATTTCTACACCCCCGAAACAATTCAAAGGGAAGCAG...GCCGCCTGAGGGCACCAGGGAGAGGGCTGTATGTCCCTCACGCCACACTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR CAA 90 bp GCAGGAAGGCCCTGCAGCAGTGACCTCACAGGAGTGGGCCCAGAAGCTGGGCACAAATGCTGCTTCCCTTaGAATTGTTTCGGGGGTGTA +
Preference number: 3 (lower is better)
Translates to: AGRPCSSDLTGVGPEAGHKCCFP*NCFGGV
Trigger: TACACCCCCGAAACAATTCAAAGGGAAGCAGCATTT...GTGCCCAGCTTCTGGGCCCACTCCTGTGAGGTCACTGCTGCAGGGCCTTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
3UTR-3UTR CAA 90 bp AATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCGCCCCAGCCTGCTTCCCTTTGAATaGTTTCGGGGGTGTAGAAAT +
Preference number: 3 (lower is better)
Translates to: NGHYEGIVHRSKPGPRPSLLPFE*FRGCRN
Trigger: ATTTCTACACCCCCGAAACAATTCAAAGGGAAGCAG...GCTGGGGCGGGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GACAGAGCCAGGCTGGGCAGCCCGGCGACGCTGGCCCCACGCACACGGGCCACCTCAGCGCCCTCCTCCTaGAGGCGGCGGCGCCCATGG +
Preference number: 4 (lower is better)
Translates to: DRARLGSPATLAPRTRATSAPSS*RRRRPW
Trigger: CCATGGGCGCCGCCGCCTCCAGGAGGAGGGCGCTGA...GGTGGCCCGTGTGCGTGGGGCCAGCGTCGCCGGGCTGCCCAGCCTGGCTCTGTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GACAGAGCCAGGCTGGGCAGCCCGGCGACGCTGGCCCCACGCACACGGGCCACCGTGTACACTCGAGGCTaGGGGCCCTCGCCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: DRARLGSPATLAPRTRATVYTRG*GPSPAG
Trigger: GCCCGCAGGCGAGGGCCCTCAGCCTCGAGTGTACAC...GGTGGCCCGTGTGCGTGGGGCCAGCGTCGCCGGGCTGCCCAGCCTGGCTCTGTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GACAGAGCCAGGCTGGGCAGCCCGGCGACGCTGGCCCCACGCACACGGGCCACCTCTGGCAGGGCCTGCTaGCGTCCTCCCGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: DRARLGSPATLAPRTRATSGRAC*RPPGCH
Trigger: GTGGCAGCCGGGAGGACGTCAGCAGGCCCTGCCAGA...GGTGGCCCGTGTGCGTGGGGCCAGCGTCGCCGGGCTGCCCAGCCTGGCTCTGTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GACAGAGCCAGGCTGGGCAGCCCGGCGACGCTGGCCCCACGCACACGGGCCACCCCGCCACCGAGGACATaGCCTCGCTCCTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: DRARLGSPATLAPRTRATPPPRT*PRSSAP
Trigger: GGGCGCTGAGGAGCGAGGCCATGTCCTCGGTGGCGG...GGTGGCCCGTGTGCGTGGGGCCAGCGTCGCCGGGCTGCCCAGCCTGGCTCTGTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GACAGAGCCAGGCTGGGCAGCCCGGCGACGCTGGCCCCACGCACACGGGCCACCTGTGGGCTGCTGGGCTaGTGGGCCGGGGTGCCTACA +
Preference number: 4 (lower is better)
Translates to: DRARLGSPATLAPRTRATCGLLG*WAGVPT
Trigger: TGTAGGCACCCCGGCCCAGCAGCCCAGCAGCCCACA...GGTGGCCCGTGTGCGTGGGGCCAGCGTCGCCGGGCTGCCCAGCCTGGCTCTGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GACAGAGCCAGGCTGGGCAGCCCGGCGACGCTGGCCCCACGCACACGGGCCACCGGGCAGGGAGGGTCCTaGACACATGTGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: DRARLGSPATLAPRTRATGQGGS*THVGCW
Trigger: CCAGCAGCCCACATGTGTTCAGGACCCTCCCTGCCC...GGTGGCCCGTGTGCGTGGGGCCAGCGTCGCCGGGCTGCCCAGCCTGGCTCTGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GACAGAGCCAGGCTGGGCAGCCCGGCGACGCTGGCCCCACGCACACGGGCCACCCTGAGGGCCCTCGCCTaGGGGCTTCCTAATGCTGGG +
Preference number: 4 (lower is better)
Translates to: DRARLGSPATLAPRTRATLRALA*GLPNAG
Trigger: CCCAGCATTAGGAAGCCCGCAGGCGAGGGCCCTCAG...GGTGGCCCGTGTGCGTGGGGCCAGCGTCGCCGGGCTGCCCAGCCTGGCTCTGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GCAGGTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCTGGAGCCCTGGCGGCTaGCCGCCCAGCTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: AGQCLAAEHPRATGRDPPWSPGG*PPSSGR
Trigger: CCTGCCAGAGCTGGGCGGGCAGCCGCCAGGGCTCCA...GGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGACCTGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGAGGGGGTCAGCGCCCTCCTCCTaGAGGCGGCGGCGCCCATGG +
Preference number: 4 (lower is better)
Translates to: APRTRATLVLVIDTAGRGSAPSS*RRRRPW
Trigger: CCATGGGCGCCGCCGCCTCCAGGAGGAGGGCGCTGA...CCCCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCAGGTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCTCAGCGCCCTCCTCCTaGAGGCGGCGGCGCCCATGG +
Preference number: 4 (lower is better)
Translates to: AGQCLAAEHPRATGRDPPSAPSS*RRRRPW
Trigger: CCATGGGCGCCGCCGCCTCCAGGAGGAGGGCGCTGA...GGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGACCTGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCCTCTGCGGCCACGGGTGCAGCGAGGACCGGAACCCACAGGGGGAACCTGAGCCCTCCGCCTCAGGGCTaGGCAGCAGGGCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: ASAATGAARTGTHRGNLSPPPQG*AAGQAP
Trigger: GGGAGCCTGCCCTGCTGCCCAGCCCTGAGGCGGAGG...GCTCAGGTTCCCCCTGTGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGAGGGGGGGCTGCCACCAGGGCTaGCGCGCAGGGGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: APRTRATLVLVIDTAGRGGCHQG*RAGAGC
Trigger: ACAGCCAGCCCCTGCGCGCCAGCCCTGGTGGCAGCC...CCCCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGC
73% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCCTCTGCGGCCACGGGTGCAGCGAGGACCGGAACCCACAGGGGGAACCTGAGCGGCTGCCACCAGGGCTaGCGCGCAGGGGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: ASAATGAARTGTHRGNLSGCHQG*RAGAGC
Trigger: ACAGCCAGCCCCTGCGCGCCAGCCCTGGTGGCAGCC...GCTCAGGTTCCCCCTGTGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCGGCCCACTCCTTGGAGCCCTaGCGGCTGCCCGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: VSAWPLSIHGPQGGILPAHSLEP*RLPAQL
Trigger: GAGCTGGGCGGGCAGCCGCCAGGGCTCCAAGGAGTG...GGCCGGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCGGCCGGGCCAGGAGCCAGCTaGGCACATCCGGGGCACTCC +
Preference number: 4 (lower is better)
Translates to: VSAWPLSIHGPQGGILPAGPGAS*AHPGHS
Trigger: GGAGTGCCCCGGATGTGCCCAGCTGGCTCCTGGCCC...GGCCGGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GACAGAGCCAGGCTGGGCAGCCCGGCGACGCTGGCCCCACGCACACGGGCCACCCGCTCAGCGAACGTCTaGGCCTTCACCCTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: DRARLGSPATLAPRTRATRSANV*AFTLRL
Trigger: CAGCCGGAGGGTGAAGGCCCAGACGTTCGCTGAGCG...GGTGGCCCGTGTGCGTGGGGCCAGCGTCGCCGGGCTGCCCAGCCTGGCTCTGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265663.12
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCGGCCGGGCTGCTGGGCTGCTaGGCCGGGGTGCCTACACTG +
Preference number: 4 (lower is better)
Translates to: VSAWPLSIHGPQGGILPAGLLGC*AGVPTL
Trigger: CAGTGTAGGCACCCCGGCCCAGCAGCCCAGCAGCCC...GGCCGGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GCAGGTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCGTGTACACTCGAGGCTaGGGGCCCTCGCCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: AGQCLAAEHPRATGRDPPVYTRG*GPSPAG
Trigger: GCCCGCAGGCGAGGGCCCTCAGCCTCGAGTGTACAC...GGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGACCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGAGGGGGTCTGGCAGGGCCTGCTaGCGTCCTCCCGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: APRTRATLVLVIDTAGRGSGRAC*RPPGCH
Trigger: GTGGCAGCCGGGAGGACGTCAGCAGGCCCTGCCAGA...CCCCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GCCTCTGCGGCCACGGGTGCAGCGAGGACCGGAACCCACAGGGGGAACCTGAGCTCTGGCAGGGCCTGCTaGCGTCCTCCCGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: ASAATGAARTGTHRGNLSSGRAC*RPPGCH
Trigger: GTGGCAGCCGGGAGGACGTCAGCAGGCCCTGCCAGA...GCTCAGGTTCCCCCTGTGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GACGCTGGCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGCGCTCCAGGACCGGCTaGAGCTCCGCTCGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: DAGPTHTGHPGAGDRYGRRSRTG*SSARAA
Trigger: AGCGGCGCGAGCGGAGCTTCAGCCGGTCCTGGAGCG...CCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGCCAGCGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265663.12
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGAGGGGGCCGCCACCGAGGACATaGCCTCGCTCCTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: APRTRATLVLVIDTAGRGPPPRT*PRSSAP
Trigger: GGGCGCTGAGGAGCGAGGCCATGTCCTCGGTGGCGG...CCCCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCGGCCAGGCGGCGCTTGTTCTaGGGGGCCGGCTGCATCTCG +
Preference number: 4 (lower is better)
Translates to: VSAWPLSIHGPQGGILPARRRLF*GAGCIS
Trigger: CGAGATGCAGCCGGCCCCCCAGAACAAGCGCCGCCT...GGCCGGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGAGGGGGATCCGGGGCACTCCTTaGAGCCCTGGCGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: APRTRATLVLVIDTAGRGIRGTP*SPGGCP
Trigger: CGGGCAGCCGCCAGGGCTCCAAGGAGTGCCCCGGAT...CCCCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCAGGTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCATCCGGGGCACTCCTTaGAGCCCTGGCGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: AGQCLAAEHPRATGRDPPIRGTP*SPGGCP
Trigger: CGGGCAGCCGCCAGGGCTCCAAGGAGTGCCCCGGAT...GGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGACCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGAGGGGGGGGCCAGGAGCCAGCTaGGCACATCCGGGGCACTCC +
Preference number: 4 (lower is better)
Translates to: APRTRATLVLVIDTAGRGGPGAS*AHPGHS
Trigger: GGAGTGCCCCGGATGTGCCCAGCTGGCTCCTGGCCC...CCCCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGC
72% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGAGGGGGCAAAGGCCCGAGGGGTaGGGCCAGGAGCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: APRTRATLVLVIDTAGRGQRPEG*GQEPAG
Trigger: CCCAGCTGGCTCCTGGCCCCACCCCTCGGGCCTTTG...CCCCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GACAGAGCCAGGCTGGGCAGCCCGGCGACGCTGGCCCCACGCACACGGGCCACCAATGCTGGGCTCCTCTaGGAGGCTGCCCTCGTAGCA +
Preference number: 4 (lower is better)
Translates to: DRARLGSPATLAPRTRATNAGLL*EAALVA
Trigger: TGCTACGAGGGCAGCCTCTCAGAGGAGCCCAGCATT...GGTGGCCCGTGTGCGTGGGGCCAGCGTCGCCGGGCTGCCCAGCCTGGCTCTGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp CCCCACCCAGAGCCTCCTCTGAAGGAGGGGACGCTGCGCCCTTCCTTCCTGCTGCGCTCCAGGACCGGCTaGAGCTCCGCTCGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: PHPEPPLKEGTLRPSFLLRSRTG*SSARAA
Trigger: AGCGGCGCGAGCGGAGCTTCAGCCGGTCCTGGAGCG...CAGCAGGAAGGAAGGGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGTGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265663.12
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCGGCCCCACCCTGGTGCTGGTaGTCGATACGGCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: VSAWPLSIHGPQGGILPAPPWCW*SIRQGG
Trigger: CCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGG...GGCCGGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCGGCCGGGTCCGGCGCCGGCTaGGGTCTAAGTAAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: VSAWPLSIHGPQGGILPAGSGAG*GLSKQG
Trigger: TCCCTGCTTACTTAGACCTCAGCCGGCGCCGGACCC...GGCCGGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GCAGGTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCACCCAGAGCCTCCTCTaGAGGAGGGGACGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: AGQCLAAEHPRATGRDPPTQSLL*RRGRCA
Trigger: GGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGT...GGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGACCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCGGCCAGCCCCAGGTCCCGGTaGAGAGGGAGTGGCCTGATG +
Preference number: 4 (lower is better)
Translates to: VSAWPLSIHGPQGGILPASPRSR*RGSGLM
Trigger: CATCAGGCCACTCCCTCTGCACCGGGACCTGGGGCT...GGCCGGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GCCTCTGCGGCCACGGGTGCAGCGAGGACCGGAACCCACAGGGGGAACCTGAGCCTCTGCGGCCACGGGTaGAGCGAGGACCGGAACCCA +
Preference number: 4 (lower is better)
Translates to: ASAATGAARTGTHRGNLSLCGHG*SEDRNP
Trigger: TGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAG...GCTCAGGTTCCCCCTGTGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GCAGGTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCAGGGACTGCAGCCTCTaGGGCCACGGGTGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: AGQCLAAEHPRATGRDPPRDCSL*GHGCSE
Trigger: CTCGCTGCACCCGTGGCCGCAGAGGCTGCAGTCCCT...GGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGACCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GACAGAGCCAGGCTGGGCAGCCCGGCGACGCTGGCCCCACGCACACGGGCCACCAACCCCATGGAGGGATaGCCACAGCTGAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: DRARLGSPATLAPRTRATNPMEG*PQLSLQ
Trigger: CTGGAGGCTCAGCTGTGGGCATCCCTCCATGGGGTT...GGTGGCCCGTGTGCGTGGGGCCAGCGTCGCCGGGCTGCCCAGCCTGGCTCTGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCGGCCGGAACGGGCTGTCTCTaGTGTCCCCTCCAGACCCGG +
Preference number: 4 (lower is better)
Translates to: VSAWPLSIHGPQGGILPAGTGCL*CPLQTR
Trigger: CCGGGTCTGGAGGGGACAGCAGAGACAGCCCGTTCC...GGCCGGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCCTCTGCGGCCACGGGTGCAGCGAGGACCGGAACCCACAGGGGGAACCTGAGCAGGCGGCGCTTGTTCTaGGGGGCCGGCTGCATCTCG +
Preference number: 4 (lower is better)
Translates to: ASAATGAARTGTHRGNLSRRRLF*GAGCIS
Trigger: CGAGATGCAGCCGGCCCCCCAGAACAAGCGCCGCCT...GCTCAGGTTCCCCCTGTGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCGGCCCCTCGTAGCAGCCGTTaGAGACGAGGGACAGGCGGC +
Preference number: 4 (lower is better)
Translates to: VSAWPLSIHGPQGGILPAPRSSR*RRGTGG
Trigger: GCCGCCTGTCCCTCGTCTCCAACGGCTGCTACGAGG...GGCCGGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GACGCTGGCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGATCCGGGGCACTCCTTaGAGCCCTGGCGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: DAGPTHTGHPGAGDRYGRIRGTP*SPGGCP
Trigger: CGGGCAGCCGCCAGGGCTCCAAGGAGTGCCCCGGAT...CCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGCCAGCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGAGGGGGCCTCCAGGCGAGGCATaGCAGGTCAGTGCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: APRTRATLVLVIDTAGRGPPGEA*QVSAWP
Trigger: CGGCCAGGCACTGACCTGCCATGCCTCGCCTGGAGG...CCCCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCGGCCCTGTGCTGGTCCCCCTaGCTATGCCCTGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: VSAWPLSIHGPQGGILPALCWSP*LCPVGW
Trigger: CCACCCCACAGGGCATAGCCAGGGGGACCAGCACAG...GGCCGGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GCCTCTGCGGCCACGGGTGCAGCGAGGACCGGAACCCACAGGGGGAACCTGAGCCCCACAGGGGGAACCTaGGCAACGTCTGAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: ASAATGAARTGTHRGNLSPTGGT*ATSEVP
Trigger: GGGCACCTCAGACGTTGCTCAGGTTCCCCCTGTGGG...GCTCAGGTTCCCCCTGTGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GCCTCTGCGGCCACGGGTGCAGCGAGGACCGGAACCCACAGGGGGAACCTGAGCGGGCAGGGAGGGTCCTaGACACATGTGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ASAATGAARTGTHRGNLSGQGGS*THVGCW
Trigger: CCAGCAGCCCACATGTGTTCAGGACCCTCCCTGCCC...GCTCAGGTTCCCCCTGTGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GCCTCTGCGGCCACGGGTGCAGCGAGGACCGGAACCCACAGGGGGAACCTGAGCCCACCCTGGTGCTGGTaGTCGATACGGCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: ASAATGAARTGTHRGNLSPPWCW*SIRQGG
Trigger: CCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGG...GCTCAGGTTCCCCCTGTGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GACGCTGGCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGACCCAGAGCCTCCTCTaGAGGAGGGGACGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: DAGPTHTGHPGAGDRYGRTQSLL*RRGRCA
Trigger: GGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGT...CCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGCCAGCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GCCTCTGCGGCCACGGGTGCAGCGAGGACCGGAACCCACAGGGGGAACCTGAGCTGGCTGACGGCTGTGTaGCCACCCCCAGCACACTGG +
Preference number: 4 (lower is better)
Translates to: ASAATGAARTGTHRGNLSWLTAV*PPPAHW
Trigger: CCAGTGTGCTGGGGGTGGTCACACAGCCGTCAGCCA...GCTCAGGTTCCCCCTGTGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGAGGGGGTGGCTGACGGCTGTGTaGCCACCCCCAGCACACTGG +
Preference number: 4 (lower is better)
Translates to: APRTRATLVLVIDTAGRGWLTAV*PPPAHW
Trigger: CCAGTGTGCTGGGGGTGGTCACACAGCCGTCAGCCA...CCCCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGAGGGGGCTGAGGGCCCTCGCCTaGGGGCTTCCTAATGCTGGG +
Preference number: 4 (lower is better)
Translates to: APRTRATLVLVIDTAGRGLRALA*GLPNAG
Trigger: CCCAGCATTAGGAAGCCCGCAGGCGAGGGCCCTCAG...CCCCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCGGCCCCTTCACCCTCCGGCTaGCGACCATGCGCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: VSAWPLSIHGPQGGILPAPSPSG*RPCAGV
Trigger: AACACCTGCGCATGGTCGGCAGCCGGAGGGTGAAGG...GGCCGGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCGGCCAGGCCTCGTCCAGCGTaGAGTGGGAGCTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: VSAWPLSIHGPQGGILPARPRPA*SGSSAG
Trigger: ACCTGCAGAGCTCCCACTGCACGCTGGACGAGGCCT...GGCCGGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GACGCTGGCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGCTGGGCGGAGGCCTCTaGCCCTCACAGGACGTCGTC +
Preference number: 4 (lower is better)
Translates to: DAGPTHTGHPGAGDRYGRLGGGL*PSQDVV
Trigger: GACGACGTCCTGTGAGGGGCAGAGGCCTCCGCCCAG...CCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGCCAGCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGAGGGGGAGCCCCAGGTCCCGGTaGAGAGGGAGTGGCCTGATG +
Preference number: 4 (lower is better)
Translates to: APRTRATLVLVIDTAGRGSPRSR*RGSGLM
Trigger: CATCAGGCCACTCCCTCTGCACCGGGACCTGGGGCT...CCCCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CCCCACCCAGAGCCTCCTCTGAAGGAGGGGACGCTGCGCCCTTCCTTCCTGCTGTCCTGCTGCCCAGACTaGCCCTACCGGGTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: PHPEPPLKEGTLRPSFLLSCCPD*PYRVRR
Trigger: GCGCCGGACCCGGTAGGGGCAGTCTGGGCAGCAGGA...CAGCAGGAAGGAAGGGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGTGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CCCCTGGAAAGCACTGAGAGGACAGACCCACGCGGCGGCCGCGGTGGAGGATCACTACAGTCCACCAGCTaGGCGGCCGGGTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PLESTERTDPRGGRGGGSLQSTS*AAGSRG
Trigger: GCCCCTGGACCCGGCCGCGCAGCTGGTGGACTGTAG...TGATCCTCCACCGCGGCCGCCGCGTGGGTCTGTCCTCTCAGTGCTTTCCAGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GACAGAGCCAGGCTGGGCAGCCCGGCGACGCTGGCCCCACGCACACGGGCCACCCACGACAGCCCATCCTaGTGGCCGTGGACAAAAGCT +
Preference number: 4 (lower is better)
Translates to: DRARLGSPATLAPRTRATHDSPS*WPWTKA
Trigger: AGCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTG...GGTGGCCCGTGTGCGTGGGGCCAGCGTCGCCGGGCTGCCCAGCCTGGCTCTGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GCCTCTGCGGCCACGGGTGCAGCGAGGACCGGAACCCACAGGGGGAACCTGAGCGGAACGGGCTGTCTCTaGTGTCCCCTCCAGACCCGG +
Preference number: 4 (lower is better)
Translates to: ASAATGAARTGTHRGNLSGTGCL*CPLQTR
Trigger: CCGGGTCTGGAGGGGACAGCAGAGACAGCCCGTTCC...GCTCAGGTTCCCCCTGTGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GACGCTGGCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGAGGCGGCGCTTGTTCTaGGGGGCCGGCTGCATCTCG +
Preference number: 4 (lower is better)
Translates to: DAGPTHTGHPGAGDRYGRRRRLF*GAGCIS
Trigger: CGAGATGCAGCCGGCCCCCCAGAACAAGCGCCGCCT...CCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGCCAGCGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCGGCCGGTCTCAGGCAGAGGTaGCTGGTCCAGCCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: VSAWPLSIHGPQGGILPAGLRQR*LVQPKG
Trigger: GCCTTTGGGCTGGACCAGCCACCTCTGCCTGAGACC...GGCCGGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCAGGTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCCGCTCAGCGAACGTCTaGGCCTTCACCCTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: AGQCLAAEHPRATGRDPPRSANV*AFTLRL
Trigger: CAGCCGGAGGGTGAAGGCCCAGACGTTCGCTGAGCG...GGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGACCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265663.12
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCCTCTGCGGCCACGGGTGCAGCGAGGACCGGAACCCACAGGGGGAACCTGAGCTGGCAGGTCAGTGCCTaGCCGCTGAGCATCCACGGG +
Preference number: 4 (lower is better)
Translates to: ASAATGAARTGTHRGNLSWQVSA*PLSIHG
Trigger: CCCGTGGATGCTCAGCGGCCAGGCACTGACCTGCCA...GCTCAGGTTCCCCCTGTGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCCTCTGCGGCCACGGGTGCAGCGAGGACCGGAACCCACAGGGGGAACCTGAGCCAGCCCTCCCTCAGCTaGGAACACAGCCAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: ASAATGAARTGTHRGNLSQPSLS*EHSQVP
Trigger: GGGCACCTGGCTGTGTTCCCAGCTGAGGGAGGGCTG...GCTCAGGTTCCCCCTGTGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCCTCTGCGGCCACGGGTGCAGCGAGGACCGGAACCCACAGGGGGAACCTGAGCATACAGCCCTCTCCCTaGTGCCCTCAGGCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ASAATGAARTGTHRGNLSIQPSP*CPQAAG
Trigger: CCCTGCCGCCTGAGGGCACCAGGGAGAGGGCTGTAT...GCTCAGGTTCCCCCTGTGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp CCTGAGCAACGTCTGAGGTGCCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACACGCTCCAGGACCGGCTaGAGCTCCGCTCGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: PEQRLRCPEVAPGETGATRSRTG*SSARAA
Trigger: AGCGGCGCGAGCGGAGCTTCAGCCGGTCCTGGAGCG...TGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265663.12
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGAGGGGGCGTAGAGGATGGGGATaGTGGAGGGGTCATCCCGGC +
Preference number: 4 (lower is better)
Translates to: APRTRATLVLVIDTAGRGRRGWG*WRGHPG
Trigger: GCCGGGATGACCCCTCCATCATCCCCATCCTCTACG...CCCCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GCAGGTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCGCTCCTCTGAGAGGCTaGCCTCGTAGCAGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: AGQCLAAEHPRATGRDPPAPLRG*PRSSRW
Trigger: CCAACGGCTGCTACGAGGGCAGCCTCTCAGAGGAGC...GGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGACCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGAGGGGGGCTCCTCTGAGAGGCTaGCCTCGTAGCAGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: APRTRATLVLVIDTAGRGAPLRG*PRSSRW
Trigger: CCAACGGCTGCTACGAGGGCAGCCTCTCAGAGGAGC...CCCCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GCCTCTGCGGCCACGGGTGCAGCGAGGACCGGAACCCACAGGGGGAACCTGAGCCCTTCACCCTCCGGCTaGCGACCATGCGCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: ASAATGAARTGTHRGNLSPSPSG*RPCAGV
Trigger: AACACCTGCGCATGGTCGGCAGCCGGAGGGTGAAGG...GCTCAGGTTCCCCCTGTGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCGGCCGTGCAGTGGGAGCTCTaGAGGTCACTGCTGTCTCGG +
Preference number: 4 (lower is better)
Translates to: VSAWPLSIHGPQGGILPAVQWEL*RSLLSR
Trigger: CCGAGACAGCAGTGACCTGCAGAGCTCCCACTGCAC...GGCCGGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265663.12
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GCCTCTGCGGCCACGGGTGCAGCGAGGACCGGAACCCACAGGGGGAACCTGAGCAGGCCTCGTCCAGCGTaGAGTGGGAGCTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: ASAATGAARTGTHRGNLSRPRPA*SGSSAG
Trigger: ACCTGCAGAGCTCCCACTGCACGCTGGACGAGGCCT...GCTCAGGTTCCCCCTGTGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CCCCACCCAGAGCCTCCTCTGAAGGAGGGGACGCTGCGCCCTTCCTTCCTGCTGCTGGGCGGAGGCCTCTaGCCCTCACAGGACGTCGTC +
Preference number: 4 (lower is better)
Translates to: PHPEPPLKEGTLRPSFLLLGGGL*PSQDVV
Trigger: GACGACGTCCTGTGAGGGGCAGAGGCCTCCGCCCAG...CAGCAGGAAGGAAGGGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCGGCCGAGCAACGTCTGAGGTaGCCTGAAGTGGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: VSAWPLSIHGPQGGILPAEQRLR*PEVAPG
Trigger: GCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTC...GGCCGGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCGGCCTGGTCCCCCTGGCTATaGCCTGTGGGGTGGTCTAGT +
Preference number: 4 (lower is better)
Translates to: VSAWPLSIHGPQGGILPAWSPWL*PVGWSS
Trigger: ACTAGACCACCCCACAGGGCATAGCCAGGGGGACCA...GGCCGGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GACGCTGGCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGCTCCGTCCCCTCCTGTaGTGGTCCCCCTGGCTATGC +
Preference number: 4 (lower is better)
Translates to: DAGPTHTGHPGAGDRYGRLRPLL*WSPWLC
Trigger: GCATAGCCAGGGGGACCAGCACAGGAGGGGACGGAG...CCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGCCAGCGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCCCTGGAAAGCACTGAGAGGACAGACCCACGCGGCGGCCGCGGTGGAGGATCACCACCGCCAGCTCAATaGCCTCCGCCTCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PLESTERTDPRGGRGGGSPPPAQ*PPPQGW
Trigger: CCAGCCCTGAGGCGGAGGCCATTGAGCTGGCGGTGG...TGATCCTCCACCGCGGCCGCCGCGTGGGTCTGTCCTCTCAGTGCTTTCCAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCAGGAAGGCCCTGCAGCAGTGACCTCACAGGAGTGGGCCCAGAAGCTGGGCACGGGCCAGGAGCCAGCTaGGCACATCCGGGGCACTCC +
Preference number: 4 (lower is better)
Translates to: AGRPCSSDLTGVGPEAGHGPGAS*AHPGHS
Trigger: GGAGTGCCCCGGATGTGCCCAGCTGGCTCCTGGCCC...GTGCCCAGCTTCTGGGCCCACTCCTGTGAGGTCACTGCTGCAGGGCCTTCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCCCTGGAAAGCACTGAGAGGACAGACCCACGCGGCGGCCGCGGTGGAGGATCAACACATGTGGGCTGCTaGGCTGCTGGGCCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: PLESTERTDPRGGRGGGSTHVGC*AAGPGC
Trigger: GCACCCCGGCCCAGCAGCCCAGCAGCCCACATGTGT...TGATCCTCCACCGCGGCCGCCGCGTGGGTCTGTCCTCTCAGTGCTTTCCAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCGGCCGCCGTGGACAAAAGCTaGGAGCTCCTGTGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: VSAWPLSIHGPQGGILPAAVDKS*ELLCPV
Trigger: GACTGGGCACAGGAGCTCCCAGCTTTTGTCCACGGC...GGCCGGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GACGCTGGCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGCAGCCCTCCCTCAGCTaGGAACACAGCCAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: DAGPTHTGHPGAGDRYGRQPSLS*EHSQVP
Trigger: GGGCACCTGGCTGTGTTCCCAGCTGAGGGAGGGCTG...CCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGCCAGCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCGGCCACGCGGCGGCCGCGGTaGAGGATCAGGTTTAATGGT +
Preference number: 4 (lower is better)
Translates to: VSAWPLSIHGPQGGILPATRRPR*RIRFNG
Trigger: ACCATTAAACCTGATCCTCCACCGCGGCCGCCGCGT...GGCCGGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCCCTGGAAAGCACTGAGAGGACAGACCCACGCGGCGGCCGCGGTGGAGGATCACCACCCCCAGCACACTaGGCCTCAAGCCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PLESTERTDPRGGRGGGSPPPAH*ASSLPG
Trigger: GCCTGGCAGGCTTGAGGCCCAGTGTGCTGGGGGTGG...TGATCCTCCACCGCGGCCGCCGCGTGGGTCTGTCCTCTCAGTGCTTTCCAGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGAGGGGGTCCGGCTGCCGACCATaGGCAGGTGTTTGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: APRTRATLVLVIDTAGRGSGCRP*AGVCGS
Trigger: ACTTCCGCAAACACCTGCGCATGGTCGGCAGCCGGA...CCCCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGAGGGGGGTGCAGTGGGAGCTCTaGAGGTCACTGCTGTCTCGG +
Preference number: 4 (lower is better)
Translates to: APRTRATLVLVIDTAGRGVQWEL*RSLLSR
Trigger: CCGAGACAGCAGTGACCTGCAGAGCTCCCACTGCAC...CCCCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265663.12
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CACACAGTGTGGCGTGAGGGACATACAGCCCTCTCCCTGGTGCCCTCAGGCGGCCTCTGCGGCCACGGGTaGAGCGAGGACCGGAACCCA +
Preference number: 4 (lower is better)
Translates to: HTVWREGHTALSLVPSGGLCGHG*SEDRNP
Trigger: TGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAG...GCCGCCTGAGGGCACCAGGGAGAGGGCTGTATGTCCCTCACGCCACACTGTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GCAGGAAGGCCCTGCAGCAGTGACCTCACAGGAGTGGGCCCAGAAGCTGGGCACTGTGGGCTGCTGGGCTaGTGGGCCGGGGTGCCTACA +
Preference number: 4 (lower is better)
Translates to: AGRPCSSDLTGVGPEAGHCGLLG*WAGVPT
Trigger: TGTAGGCACCCCGGCCCAGCAGCCCAGCAGCCCACA...GTGCCCAGCTTCTGGGCCCACTCCTGTGAGGTCACTGCTGCAGGGCCTTCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CCTGAGCAACGTCTGAGGTGCCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACACTACAGTCCACCAGCTaGGCGGCCGGGTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PEQRLRCPEVAPGETGATLQSTS*AAGSRG
Trigger: GCCCCTGGACCCGGCCGCGCAGCTGGTGGACTGTAG...TGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GCCTCTGCGGCCACGGGTGCAGCGAGGACCGGAACCCACAGGGGGAACCTGAGCTGGTCCCCCTGGCTATaGCCTGTGGGGTGGTCTAGT +
Preference number: 4 (lower is better)
Translates to: ASAATGAARTGTHRGNLSWSPWL*PVGWSS
Trigger: ACTAGACCACCCCACAGGGCATAGCCAGGGGGACCA...GCTCAGGTTCCCCCTGTGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CCCCTGGAAAGCACTGAGAGGACAGACCCACGCGGCGGCCGCGGTGGAGGATCACTCCGTCCCCTCCTGTaGTGGTCCCCCTGGCTATGC +
Preference number: 4 (lower is better)
Translates to: PLESTERTDPRGGRGGGSLRPLL*WSPWLC
Trigger: GCATAGCCAGGGGGACCAGCACAGGAGGGGACGGAG...TGATCCTCCACCGCGGCCGCCGCGTGGGTCTGTCCTCTCAGTGCTTTCCAGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CCCCTGGAAAGCACTGAGAGGACAGACCCACGCGGCGGCCGCGGTGGAGGATCAGGAACGGGCTGTCTCTaGTGTCCCCTCCAGACCCGG +
Preference number: 4 (lower is better)
Translates to: PLESTERTDPRGGRGGGSGTGCL*CPLQTR
Trigger: CCGGGTCTGGAGGGGACAGCAGAGACAGCCCGTTCC...TGATCCTCCACCGCGGCCGCCGCGTGGGTCTGTCCTCTCAGTGCTTTCCAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GACAGAGCCAGGCTGGGCAGCCCGGCGACGCTGGCCCCACGCACACGGGCCACCCCATGCGCAGGTGTTTaGGGAAGTTCGAGATGGCTT +
Preference number: 4 (lower is better)
Translates to: DRARLGSPATLAPRTRATPCAGV*GSSRWL
Trigger: AAGCCATCTCGAACTTCCGCAAACACCTGCGCATGG...GGTGGCCCGTGTGCGTGGGGCCAGCGTCGCCGGGCTGCCCAGCCTGGCTCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437259.5
CDS-3UTR CCA 90 bp CCCCACCCAGAGCCTCCTCTGAAGGAGGGGACGCTGCGCCCTTCCTTCCTGCTGGGGCTGCTCGCACTTTaGCCGCCACCGAGGACATGG +
Preference number: 4 (lower is better)
Translates to: PHPEPPLKEGTLRPSFLLGLLAL*PPPRTW
Trigger: CCATGTCCTCGGTGGCGGCCAAAGTGCGAGCAGCCC...CAGCAGGAAGGAAGGGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GACGCTGGCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGGTCTCAGGCAGAGGTaGCTGGTCCAGCCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: DAGPTHTGHPGAGDRYGRGLRQR*LVQPKG
Trigger: GCCTTTGGGCTGGACCAGCCACCTCTGCCTGAGACC...CCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGCCAGCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGAGGGGGTCGTCCAGCGTGCAGTaGGAGCTCTGCAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: APRTRATLVLVIDTAGRGSSSVQ*ELCRSL
Trigger: CAGTGACCTGCAGAGCTCCCACTGCACGCTGGACGA...CCCCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGAGGGGGAGCAGCTTCGAGTGCTaGCGGCTCTTCCACAGGCGA +
Preference number: 4 (lower is better)
Translates to: APRTRATLVLVIDTAGRGSSFEC*RLFHRR
Trigger: TCGCCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCT...CCCCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCAGGTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCAGCAGCTTCGAGTGCTaGCGGCTCTTCCACAGGCGA +
Preference number: 4 (lower is better)
Translates to: AGQCLAAEHPRATGRDPPSSFEC*RLFHRR
Trigger: TCGCCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCT...GGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGACCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCTGAGCAACGTCTGAGGTGCCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACAGGGCTGCTGGGCTGCTaGGCCGGGGTGCCTACACTG +
Preference number: 4 (lower is better)
Translates to: PEQRLRCPEVAPGETGATGLLGC*AGVPTL
Trigger: CAGTGTAGGCACCCCGGCCCAGCAGCCCAGCAGCCC...TGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCAGGAAGGCCCTGCAGCAGTGACCTCACAGGAGTGGGCCCAGAAGCTGGGCACACACATGTGGGCTGCTaGGCTGCTGGGCCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: AGRPCSSDLTGVGPEAGHTHVGC*AAGPGC
Trigger: GCACCCCGGCCCAGCAGCCCAGCAGCCCACATGTGT...GTGCCCAGCTTCTGGGCCCACTCCTGTGAGGTCACTGCTGCAGGGCCTTCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CACACAGTGTGGCGTGAGGGACATACAGCCCTCTCCCTGGTGCCCTCAGGCGGCACACATGTGGGCTGCTaGGCTGCTGGGCCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: HTVWREGHTALSLVPSGGTHVGC*AAGPGC
Trigger: GCACCCCGGCCCAGCAGCCCAGCAGCCCACATGTGT...GCCGCCTGAGGGCACCAGGGAGAGGGCTGTATGTCCCTCACGCCACACTGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCCTCTGCGGCCACGGGTGCAGCGAGGACCGGAACCCACAGGGGGAACCTGAGCGCCGTGGACAAAAGCTaGGAGCTCCTGTGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: ASAATGAARTGTHRGNLSAVDKS*ELLCPV
Trigger: GACTGGGCACAGGAGCTCCCAGCTTTTGTCCACGGC...GCTCAGGTTCCCCCTGTGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGAGGGGGGACAGCCCATCCTGCTaGCCGTGGACAAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: APRTRATLVLVIDTAGRGDSPSC*PWTKAG
Trigger: CCCAGCTTTTGTCCACGGCCAGCAGGATGGGCTGTC...CCCCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCCTCTGCGGCCACGGGTGCAGCGAGGACCGGAACCCACAGGGGGAACCTGAGCACGCGGCGGCCGCGGTaGAGGATCAGGTTTAATGGT +
Preference number: 4 (lower is better)
Translates to: ASAATGAARTGTHRGNLSTRRPR*RIRFNG
Trigger: ACCATTAAACCTGATCCTCCACCGCGGCCGCCGCGT...GCTCAGGTTCCCCCTGTGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCGGCCCTATGCCCTGTGGGGTaGTCTAGTGGCCTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: VSAWPLSIHGPQGGILPALCPVG*SSGLAP
Trigger: TGGAGCTAGGCCACTAGACCACCCCACAGGGCATAG...GGCCGGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCCCACCCAGAGCCTCCTCTGAAGGAGGGGACGCTGCGCCCTTCCTTCCTGCTGCGTCCCCTCCTGTGCTaGTCCCCCTGGCTATGCCCT +
Preference number: 4 (lower is better)
Translates to: PHPEPPLKEGTLRPSFLLRPLLC*SPWLCP
Trigger: AGGGCATAGCCAGGGGGACCAGCACAGGAGGGGACG...CAGCAGGAAGGAAGGGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGTGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCAGGAAGGCCCTGCAGCAGTGACCTCACAGGAGTGGGCCCAGAAGCTGGGCACCCACCCCCAGCACACTaGGCCTCAAGCCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: AGRPCSSDLTGVGPEAGHPPPAH*ASSLPG
Trigger: GCCTGGCAGGCTTGAGGCCCAGTGTGCTGGGGGTGG...GTGCCCAGCTTCTGGGCCCACTCCTGTGAGGTCACTGCTGCAGGGCCTTCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CACACAGTGTGGCGTGAGGGACATACAGCCCTCTCCCTGGTGCCCTCAGGCGGCCCACCCCCAGCACACTaGGCCTCAAGCCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: HTVWREGHTALSLVPSGGPPPAH*ASSLPG
Trigger: GCCTGGCAGGCTTGAGGCCCAGTGTGCTGGGGGTGG...GCCGCCTGAGGGCACCAGGGAGAGGGCTGTATGTCCCTCACGCCACACTGTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GGCCTAGCTCCAACTCTGTCCAGGCAGGAAGGCCCTGCAGCAGTGACCTCACAGGTGTACACTCGAGGCTaGGGGCCCTCGCCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: GLAPTLSRQEGPAAVTSQVYTRG*GPSPAG
Trigger: GCCCGCAGGCGAGGGCCCTCAGCCTCGAGTGTACAC...CTGTGAGGTCACTGCTGCAGGGCCTTCCTGCCTGGACAGAGTTGGAGCTAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp CCTGAGCAACGTCTGAGGTGCCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACATCAGTGCCTGGCCGCTaGGCATCCACGGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: PEQRLRCPEVAPGETGATSVPGR*ASTGHR
Trigger: CCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGA...TGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GCAGGAAGGCCCTGCAGCAGTGACCTCACAGGAGTGGGCCCAGAAGCTGGGCACGGGTCCGGCGCCGGCTaGGGTCTAAGTAAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: AGRPCSSDLTGVGPEAGHGSGAG*GLSKQG
Trigger: TCCCTGCTTACTTAGACCTCAGCCGGCGCCGGACCC...GTGCCCAGCTTCTGGGCCCACTCCTGTGAGGTCACTGCTGCAGGGCCTTCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GCAGGAAGGCCCTGCAGCAGTGACCTCACAGGAGTGGGCCCAGAAGCTGGGCACGCCCCTGGAAAGCACTaGGAGGACAGACCCACGCGG +
Preference number: 4 (lower is better)
Translates to: AGRPCSSDLTGVGPEAGHAPGKH*EDRPTR
Trigger: CCGCGTGGGTCTGTCCTCTCAGTGCTTTCCAGGGGC...GTGCCCAGCTTCTGGGCCCACTCCTGTGAGGTCACTGCTGCAGGGCCTTCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CCCCTGGAAAGCACTGAGAGGACAGACCCACGCGGCGGCCGCGGTGGAGGATCAAGGCCTCGTCCAGCGTaGAGTGGGAGCTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PLESTERTDPRGGRGGGSRPRPA*SGSSAG
Trigger: ACCTGCAGAGCTCCCACTGCACGCTGGACGAGGCCT...TGATCCTCCACCGCGGCCGCCGCGTGGGTCTGTCCTCTCAGTGCTTTCCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GCCTCTGCGGCCACGGGTGCAGCGAGGACCGGAACCCACAGGGGGAACCTGAGCGCTCTGGGTTCACTTTaGTCATCAGGCGGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: ASAATGAARTGTHRGNLSALGSL*SSGGSA
Trigger: GGCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGC...GCTCAGGTTCCCCCTGTGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GCAGGTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCGCTCTGGGTTCACTTTaGTCATCAGGCGGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: AGQCLAAEHPRATGRDPPALGSL*SSGGSA
Trigger: GGCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGC...GGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGACCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGAGGGGGGCTCTGGGTTCACTTTaGTCATCAGGCGGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: APRTRATLVLVIDTAGRGALGSL*SSGGSA
Trigger: GGCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGC...CCCCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GACGCTGGCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGAGCAACGTCTGAGGTaGCCTGAAGTGGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: DAGPTHTGHPGAGDRYGREQRLR*PEVAPG
Trigger: GCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTC...CCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGCCAGCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CCTGAGCAACGTCTGAGGTGCCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACAAGGGACTGCAGCCTCTaGGGCCACGGGTGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: PEQRLRCPEVAPGETGATRDCSL*GHGCSE
Trigger: CTCGCTGCACCCGTGGCCGCAGAGGCTGCAGTCCCT...TGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GACGCTGGCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGAACCCCATGGAGGGATaGCCACAGCTGAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: DAGPTHTGHPGAGDRYGRNPMEG*PQLSLQ
Trigger: CTGGAGGCTCAGCTGTGGGCATCCCTCCATGGGGTT...CCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGCCAGCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CCTGAGCAACGTCTGAGGTGCCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACATGTGGGCTGCTGGGCTaGTGGGCCGGGGTGCCTACA +
Preference number: 4 (lower is better)
Translates to: PEQRLRCPEVAPGETGATCGLLG*WAGVPT
Trigger: TGTAGGCACCCCGGCCCAGCAGCCCAGCAGCCCACA...TGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GCAGGAAGGCCCTGCAGCAGTGACCTCACAGGAGTGGGCCCAGAAGCTGGGCACCTCCGTCCCCTCCTGTaGTGGTCCCCCTGGCTATGC +
Preference number: 4 (lower is better)
Translates to: AGRPCSSDLTGVGPEAGHLRPLL*WSPWLC
Trigger: GCATAGCCAGGGGGACCAGCACAGGAGGGGACGGAG...GTGCCCAGCTTCTGGGCCCACTCCTGTGAGGTCACTGCTGCAGGGCCTTCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CCCCACCCAGAGCCTCCTCTGAAGGAGGGGACGCTGCGCCCTTCCTTCCTGCTGGTGCAGTGGGAGCTCTaGAGGTCACTGCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PHPEPPLKEGTLRPSFLLVQWEL*RSLLWA
Trigger: GGCCCAGAGCAGTGACCTGCAGAGCTCCCACTGCAC...CAGCAGGAAGGAAGGGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371473.7
CDS-3UTR CCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGTCAGCGCCCTCCTCCTaGAGGCGGCGGCGCCCATGG +
Preference number: 4 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLSAPSS*RRRRPW
Trigger: CCATGGGCGCCGCCGCCTCCAGGAGGAGGGCGCTGA...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCTGAGCAACGTCTGAGGTGCCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACAAGGCGGCGCTTGTTCTaGGGGGCCGGCTGCATCTCG +
Preference number: 4 (lower is better)
Translates to: PEQRLRCPEVAPGETGATRRRLF*GAGCIS
Trigger: CGAGATGCAGCCGGCCCCCCAGAACAAGCGCCGCCT...TGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCCTCTGCGGCCACGGGTGCAGCGAGGACCGGAACCCACAGGGGGAACCTGAGCCAGGCTCCCCAGAGATaGTGTACACTCGAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: ASAATGAARTGTHRGNLSQAPQR*CTLEAE
Trigger: CTCAGCCTCGAGTGTACACCATCTCTGGGGAGCCTG...GCTCAGGTTCCCCCTGTGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCCTCGCCCCAGCTATATACACGACAGCCCATCCTGCTGGCCGTGGACAAAAGCCCTCCGCCTCAGGGCTaGGCAGCAGGGCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: PSPQLYTRQPILLAVDKSPPPQG*AAGQAP
Trigger: GGGAGCCTGCCCTGCTGCCCAGCCCTGAGGCGGAGG...GCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTGTATATAGCTGGGGCGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCTGAGCAACGTCTGAGGTGCCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACACCACCGCCAGCTCAATaGCCTCCGCCTCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PEQRLRCPEVAPGETGATPPPAQ*PPPQGW
Trigger: CCAGCCCTGAGGCGGAGGCCATTGAGCTGGCGGTGG...TGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGCCTAGCTCCAACTCTGTCCAGGCAGGAAGGCCCTGCAGCAGTGACCTCACAGATCCGGGGCACTCCTTaGAGCCCTGGCGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: GLAPTLSRQEGPAAVTSQIRGTP*SPGGCP
Trigger: CGGGCAGCCGCCAGGGCTCCAAGGAGTGCCCCGGAT...CTGTGAGGTCACTGCTGCAGGGCCTTCCTGCCTGGACAGAGTTGGAGCTAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCCCACCCAGAGCCTCCTCTGAAGGAGGGGACGCTGCGCCCTTCCTTCCTGCTGGGTCTCAGGCAGAGGTaGCTGGTCCAGCCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: PHPEPPLKEGTLRPSFLLGLRQR*LVQPKG
Trigger: GCCTTTGGGCTGGACCAGCCACCTCTGCCTGAGACC...CAGCAGGAAGGAAGGGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GACGCTGGCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGAAGTGTCGGCTTTCATaGGGGTGGGGTCGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: DAGPTHTGHPGAGDRYGRKCRLS*GWGRSR
Trigger: CCTGGAGCGACCCCACCCCCATGAAAGCCGACACTT...CCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGCCAGCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265663.12
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCAGGAAGGCCCTGCAGCAGTGACCTCACAGGAGTGGGCCCAGAAGCTGGGCACCCGGTGCAGAGGGAGTaGCCTGATGGTGACTGGGCG +
Preference number: 4 (lower is better)
Translates to: AGRPCSSDLTGVGPEAGHPVQRE*PDGDWA
Trigger: CGCCCAGTCACCATCAGGCCACTCCCTCTGCACCGG...GTGCCCAGCTTCTGGGCCCACTCCTGTGAGGTCACTGCTGCAGGGCCTTCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCTGAGCAACGTCTGAGGTGCCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACACCTCCAGGCGAGGCATaGCAGGTCAGTGCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: PEQRLRCPEVAPGETGATPPGEA*QVSAWP
Trigger: CGGCCAGGCACTGACCTGCCATGCCTCGCCTGGAGG...TGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCAGGTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCTCCAGGGGCCCACTGTaGTGCCAGCGAGTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: AGQCLAAEHPRATGRDPPSRGPL*CQRVSQ
Trigger: TTGAGAAACTCGCTGGCACCACAGTGGGCCCCTGGA...GGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGACCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GACGCTGGCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGCCGTGGACAAAAGCTaGGAGCTCCTGTGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: DAGPTHTGHPGAGDRYGRAVDKS*ELLCPV
Trigger: GACTGGGCACAGGAGCTCCCAGCTTTTGTCCACGGC...CCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGCCAGCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GACGCTGGCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGCCATCCTGCTGGCCGTaGACAAAAGCTGGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: DAGPTHTGHPGAGDRYGRPSCWP*TKAGSS
Trigger: GGAGCTCCCAGCTTTTGTCCACGGCCAGCAGGATGG...CCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGCCAGCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCAGGTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCCTATGCCCTGTGGGGTaGTCTAGTGGCCTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: AGQCLAAEHPRATGRDPPLCPVG*SSGLAP
Trigger: TGGAGCTAGGCCACTAGACCACCCCACAGGGCATAG...GGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGACCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GACGCTGGCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGAACCTGAGCAACGTCTaGGGTGCCCTGAAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: DAGPTHTGHPGAGDRYGRNLSNV*GALKWL
Trigger: GAGCCACTTCAGGGCACCTCAGACGTTGCTCAGGTT...CCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGCCAGCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp CCTGAGCAACGTCTGAGGTGCCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACATGGCTGACGGCTGTGTaGCCACCCCCAGCACACTGG +
Preference number: 4 (lower is better)
Translates to: PEQRLRCPEVAPGETGATWLTAV*PPPAHW
Trigger: CCAGTGTGCTGGGGGTGGTCACACAGCCGTCAGCCA...TGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GCAGGAAGGCCCTGCAGCAGTGACCTCACAGGAGTGGGCCCAGAAGCTGGGCACCCTTCACCCTCCGGCTaGCGACCATGCGCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: AGRPCSSDLTGVGPEAGHPSPSG*RPCAGV
Trigger: AACACCTGCGCATGGTCGGCAGCCGGAGGGTGAAGG...GTGCCCAGCTTCTGGGCCCACTCCTGTGAGGTCACTGCTGCAGGGCCTTCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CCCCTGGAAAGCACTGAGAGGACAGACCCACGCGGCGGCCGCGGTGGAGGATCAGTGCAGTGGGAGCTCTaGAGGTCACTGCTGTCTCGG +
Preference number: 4 (lower is better)
Translates to: PLESTERTDPRGGRGGGSVQWEL*RSLLSR
Trigger: CCGAGACAGCAGTGACCTGCAGAGCTCCCACTGCAC...TGATCCTCCACCGCGGCCGCCGCGTGGGTCTGTCCTCTCAGTGCTTTCCAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CCCCTGGAAAGCACTGAGAGGACAGACCCACGCGGCGGCCGCGGTGGAGGATCATCCAGCAGCTTCGAGTaGTGGCGGCTCTTCCACAGG +
Preference number: 4 (lower is better)
Translates to: PLESTERTDPRGGRGGGSSSSFE*WRLFHR
Trigger: CCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCTGGA...TGATCCTCCACCGCGGCCGCCGCGTGGGTCTGTCCTCTCAGTGCTTTCCAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CCCCACCCAGAGCCTCCTCTGAAGGAGGGGACGCTGCGCCCTTCCTTCCTGCTGAACCCCATGGAGGGATaGCCACAGCTGAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PHPEPPLKEGTLRPSFLLNPMEG*PQLSLQ
Trigger: CTGGAGGCTCAGCTGTGGGCATCCCTCCATGGGGTT...CAGCAGGAAGGAAGGGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp AATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCGCCCCAGCTCCTGCTGCCCAGACTaGCCCTACCGGGTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: NGHYEGIVHRSKPGPRPSSCCPD*PYRVRR
Trigger: GCGCCGGACCCGGTAGGGGCAGTCTGGGCAGCAGGA...GCTGGGGCGGGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GACGCTGGCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGCACGACAGCCCATCCTaGTGGCCGTGGACAAAAGCT +
Preference number: 4 (lower is better)
Translates to: DAGPTHTGHPGAGDRYGRHDSPS*WPWTKA
Trigger: AGCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTG...CCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGCCAGCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CCTGAGCAACGTCTGAGGTGCCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACAAAGCCTGCCAGGCTGTaGCAGGCTGCGCACCAGTGG +
Preference number: 4 (lower is better)
Translates to: PEQRLRCPEVAPGETGATKPARL*QAAHQW
Trigger: CCACTGGTGCGCAGCCTGGCACAGCCTGGCAGGCTT...TGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCTGAGCAACGTCTGAGGTGCCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACAGGGCTGCTCGCACTTTaGCCGCCACCGAGGACATGG +
Preference number: 4 (lower is better)
Translates to: PEQRLRCPEVAPGETGATGLLAL*PPPRTW
Trigger: CCATGTCCTCGGTGGCGGCCAAAGTGCGAGCAGCCC...TGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GACGCTGGCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGCAGGCTCCCCAGAGATaGTGTACACTCGAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: DAGPTHTGHPGAGDRYGRQAPQR*CTLEAE
Trigger: CTCAGCCTCGAGTGTACACCATCTCTGGGGAGCCTG...CCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGCCAGCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCGCCCCAGCCTGCCCGCCCAGCTCTaGCAGGGCCTGCTGACGTCC +
Preference number: 4 (lower is better)
Translates to: NGHYEGIVHRSKPGPRPSLPAQL*QGLLTS
Trigger: GGACGTCAGCAGGCCCTGCCAGAGCTGGGCGGGCAG...GCTGGGGCGGGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCCTCGCCCCAGCTATATACACGACAGCCCATCCTGCTGGCCGTGGACAAAAGCCTGCCCGCCCAGCTCTaGCAGGGCCTGCTGACGTCC +
Preference number: 4 (lower is better)
Translates to: PSPQLYTRQPILLAVDKSLPAQL*QGLLTS
Trigger: GGACGTCAGCAGGCCCTGCCAGAGCTGGGCGGGCAG...GCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTGTATATAGCTGGGGCGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCCTCGCCCCAGCTATATACACGACAGCCCATCCTGCTGGCCGTGGACAAAAGCGGGCCAGGAGCCAGCTaGGCACATCCGGGGCACTCC +
Preference number: 4 (lower is better)
Translates to: PSPQLYTRQPILLAVDKSGPGAS*AHPGHS
Trigger: GGAGTGCCCCGGATGTGCCCAGCTGGCTCCTGGCCC...GCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTGTATATAGCTGGGGCGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCGCCCCAGCCAAAGGCCCGAGGGGTaGGGCCAGGAGCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: NGHYEGIVHRSKPGPRPSQRPEG*GQEPAG
Trigger: CCCAGCTGGCTCCTGGCCCCACCCCTCGGGCCTTTG...GCTGGGGCGGGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCAGGAAGGCCCTGCAGCAGTGACCTCACAGGAGTGGGCCCAGAAGCTGGGCACGGTCTCAGGCAGAGGTaGCTGGTCCAGCCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: AGRPCSSDLTGVGPEAGHGLRQR*LVQPKG
Trigger: GCCTTTGGGCTGGACCAGCCACCTCTGCCTGAGACC...GTGCCCAGCTTCTGGGCCCACTCCTGTGAGGTCACTGCTGCAGGGCCTTCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGCCTAGCTCCAACTCTGTCCAGGCAGGAAGGCCCTGCAGCAGTGACCTCACAGCGGCTTTCATGGGGGTaGGGTCGCTCCAGGACCGGC +
Preference number: 4 (lower is better)
Translates to: GLAPTLSRQEGPAAVTSQRLSWG*GRSRTG
Trigger: GCCGGTCCTGGAGCGACCCCACCCCCATGAAAGCCG...CTGTGAGGTCACTGCTGCAGGGCCTTCCTGCCTGGACAGAGTTGGAGCTAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCCCACCCAGAGCCTCCTCTGAAGGAGGGGACGCTGCGCCCTTCCTTCCTGCTGAAGTGTCGGCTTTCATaGGGGTGGGGTCGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PHPEPPLKEGTLRPSFLLKCRLS*GWGRSR
Trigger: CCTGGAGCGACCCCACCCCCATGAAAGCCGACACTT...CAGCAGGAAGGAAGGGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000265663.12
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCCCTGGAAAGCACTGAGAGGACAGACCCACGCGGCGGCCGCGGTGGAGGATCAAAGTGTCGGCTTTCATaGGGGTGGGGTCGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PLESTERTDPRGGRGGGSKCRLS*GWGRSR
Trigger: CCTGGAGCGACCCCACCCCCATGAAAGCCGACACTT...TGATCCTCCACCGCGGCCGCCGCGTGGGTCTGTCCTCTCAGTGCTTTCCAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCCCACCCAGAGCCTCCTCTGAAGGAGGGGACGCTGCGCCCTTCCTTCCTGCTGTCGTCCAGCGTGCAGTaGGAGCTCTGCAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: PHPEPPLKEGTLRPSFLLSSSVQ*ELCRSL
Trigger: CAGTGACCTGCAGAGCTCCCACTGCACGCTGGACGA...CAGCAGGAAGGAAGGGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCCTCTGCGGCCACGGGTGCAGCGAGGACCGGAACCCACAGGGGGAACCTGAGCATCATCTGCTTCCCTTaGGCTGAGAGCTCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: ASAATGAARTGTHRGNLSIICFP*AESSRG
Trigger: ACCCCTGGAGCTCTCAGCCCAAGGGAAGCAGATGAT...GCTCAGGTTCCCCCTGTGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCTGAGCAACGTCTGAGGTGCCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACACCGGTGCAGAGGGAGTaGCCTGATGGTGACTGGGCG +
Preference number: 4 (lower is better)
Translates to: PEQRLRCPEVAPGETGATPVQRE*PDGDWA
Trigger: CGCCCAGTCACCATCAGGCCACTCCCTCTGCACCGG...TGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCTGAGCAACGTCTGAGGTGCCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACATGGCAGGTCAGTGCCTaGCCGCTGAGCATCCACGGG +
Preference number: 4 (lower is better)
Translates to: PEQRLRCPEVAPGETGATWQVSA*PLSIHG
Trigger: CCCGTGGATGCTCAGCGGCCAGGCACTGACCTGCCA...TGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GACGCTGGCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGTCCAGGGGCCCACTGTaGTGCCAGCGAGTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: DAGPTHTGHPGAGDRYGRSRGPL*CQRVSQ
Trigger: TTGAGAAACTCGCTGGCACCACAGTGGGCCCCTGGA...CCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGCCAGCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCCCACCCAGAGCCTCCTCTGAAGGAGGGGACGCTGCGCCCTTCCTTCCTGCTGGACAGCCCATCCTGCTaGCCGTGGACAAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PHPEPPLKEGTLRPSFLLDSPSC*PWTKAG
Trigger: CCCAGCTTTTGTCCACGGCCAGCAGGATGGGCTGTC...CAGCAGGAAGGAAGGGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCCCTGGAAAGCACTGAGAGGACAGACCCACGCGGCGGCCGCGGTGGAGGATCAGTGACCTCACAGGAGTaGGCCCAGAAGCTGGGCACA +
Preference number: 4 (lower is better)
Translates to: PLESTERTDPRGGRGGGSVTSQE*AQKLGT
Trigger: TGTGCCCAGCTTCTGGGCCCACTCCTGTGAGGTCAC...TGATCCTCCACCGCGGCCGCCGCGTGGGTCTGTCCTCTCAGTGCTTTCCAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCCCACCCAGAGCCTCCTCTGAAGGAGGGGACGCTGCGCCCTTCCTTCCTGCTGGTGACCTCACAGGAGTaGGCCCAGAAGCTGGGCACA +
Preference number: 4 (lower is better)
Translates to: PHPEPPLKEGTLRPSFLLVTSQE*AQKLGT
Trigger: TGTGCCCAGCTTCTGGGCCCACTCCTGTGAGGTCAC...CAGCAGGAAGGAAGGGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCTGAGCAACGTCTGAGGTGCCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACACTGTGCTGGTCCCCCTaGCTATGCCCTGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PEQRLRCPEVAPGETGATLCWSP*LCPVGW
Trigger: CCACCCCACAGGGCATAGCCAGGGGGACCAGCACAG...TGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CACACAGTGTGGCGTGAGGGACATACAGCCCTCTCCCTGGTGCCCTCAGGCGGCTGCAGGTCACTGCTCTaGGCCTTCACCCTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: HTVWREGHTALSLVPSGGCRSLL*AFTLRL
Trigger: CAGCCGGAGGGTGAAGGCCCAGAGCAGTGACCTGCA...GCCGCCTGAGGGCACCAGGGAGAGGGCTGTATGTCCCTCACGCCACACTGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371473.7
CDS-3UTR TCA 90 bp CCTGAGCAACGTCTGAGGTGCCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACAGCATCAGCCAGCAGGTaGTCTGCGCCGTTGCGGTTC +
Preference number: 4 (lower is better)
Translates to: PEQRLRCPEVAPGETGATASASR*SAPLRF
Trigger: GAACCGCAACGGCGCAGATCACCTGCTGGCTGATGC...TGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GCCTCTGCGGCCACGGGTGCAGCGAGGACCGGAACCCACAGGGGGAACCTGAGCTGGCCACCTTGTTCTTaGGGAGATAGAGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: ASAATGAARTGTHRGNLSWPPCS*GDRGVQ
Trigger: CTGGACACCTCTATCTCCTCAAGAACAAGGTGGCCA...GCTCAGGTTCCCCCTGTGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GGCCTAGCTCCAACTCTGTCCAGGCAGGAAGGCCCTGCAGCAGTGACCTCACAGGGGTCCGGCGCCGGCTaGGGTCTAAGTAAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GLAPTLSRQEGPAAVTSQGSGAG*GLSKQG
Trigger: TCCCTGCTTACTTAGACCTCAGCCGGCGCCGGACCC...CTGTGAGGTCACTGCTGCAGGGCCTTCCTGCCTGGACAGAGTTGGAGCTAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp CCCTCGCCCCAGCTATATACACGACAGCCCATCCTGCTGGCCGTGGACAAAAGCACCCAGAGCCTCCTCTaGAGGAGGGGACGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: PSPQLYTRQPILLAVDKSTQSLL*RRGRCA
Trigger: GGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGT...GCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTGTATATAGCTGGGGCGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GGCCTAGCTCCAACTCTGTCCAGGCAGGAAGGCCCTGCAGCAGTGACCTCACAGAAGGCCCTGCAGCAGTaGCCTCACAGGAGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: GLAPTLSRQEGPAAVTSQKALQQ*PHRSGP
Trigger: GGGCCCACTCCTGTGAGGTCACTGCTGCAGGGCCTT...CTGTGAGGTCACTGCTGCAGGGCCTTCCTGCCTGGACAGAGTTGGAGCTAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CCTGAGCAACGTCTGAGGTGCCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACAGCTCCTCTGAGAGGCTaGCCTCGTAGCAGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: PEQRLRCPEVAPGETGATAPLRG*PRSSRW
Trigger: CCAACGGCTGCTACGAGGGCAGCCTCTCAGAGGAGC...TGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GGCCTAGCTCCAACTCTGTCCAGGCAGGAAGGCCCTGCAGCAGTGACCTCACAGCTGAGGGCCCTCGCCTaGGGGCTTCCTAATGCTGGG +
Preference number: 4 (lower is better)
Translates to: GLAPTLSRQEGPAAVTSQLRALA*GLPNAG
Trigger: CCCAGCATTAGGAAGCCCGCAGGCGAGGGCCCTCAG...CTGTGAGGTCACTGCTGCAGGGCCTTCCTGCCTGGACAGAGTTGGAGCTAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GCCTCTGCGGCCACGGGTGCAGCGAGGACCGGAACCCACAGGGGGAACCTGAGCGATGTCCTCGAAGGTTaGGTGCTCATGGTCGTAGAG +
Preference number: 4 (lower is better)
Translates to: ASAATGAARTGTHRGNLSDVLEG*VLMVVE
Trigger: CTCTACGACCATGAGCACGCAACCTTCGAGGACATC...GCTCAGGTTCCCCCTGTGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GCAGGAAGGCCCTGCAGCAGTGACCTCACAGGAGTGGGCCCAGAAGCTGGGCACTCCAGCAGCTTCGAGTaGTGGCGGCTCTTCCACAGG +
Preference number: 4 (lower is better)
Translates to: AGRPCSSDLTGVGPEAGHSSSFE*WRLFHR
Trigger: CCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCTGGA...GTGCCCAGCTTCTGGGCCCACTCCTGTGAGGTCACTGCTGCAGGGCCTTCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GGCCTAGCTCCAACTCTGTCCAGGCAGGAAGGCCCTGCAGCAGTGACCTCACAGAGCCCCAGGTCCCGGTaGAGAGGGAGTGGCCTGATG +
Preference number: 4 (lower is better)
Translates to: GLAPTLSRQEGPAAVTSQSPRSR*RGSGLM
Trigger: CATCAGGCCACTCCCTCTGCACCGGGACCTGGGGCT...CTGTGAGGTCACTGCTGCAGGGCCTTCCTGCCTGGACAGAGTTGGAGCTAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp AATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCGCCCCAGCAGGGACTGCAGCCTCTaGGGCCACGGGTGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: NGHYEGIVHRSKPGPRPSRDCSL*GHGCSE
Trigger: CTCGCTGCACCCGTGGCCGCAGAGGCTGCAGTCCCT...GCTGGGGCGGGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp AATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCGCCCCAGCTGTGGGCTGCTGGGCTaGTGGGCCGGGGTGCCTACA +
Preference number: 4 (lower is better)
Translates to: NGHYEGIVHRSKPGPRPSCGLLG*WAGVPT
Trigger: TGTAGGCACCCCGGCCCAGCAGCCCAGCAGCCCACA...GCTGGGGCGGGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CACACAGTGTGGCGTGAGGGACATACAGCCCTCTCCCTGGTGCCCTCAGGCGGCTGGTCCCCCTGGCTATaGCCTGTGGGGTGGTCTAGT +
Preference number: 4 (lower is better)
Translates to: HTVWREGHTALSLVPSGGWSPWL*PVGWSS
Trigger: ACTAGACCACCCCACAGGGCATAGCCAGGGGGACCA...GCCGCCTGAGGGCACCAGGGAGAGGGCTGTATGTCCCTCACGCCACACTGTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGCCTAGCTCCAACTCTGTCCAGGCAGGAAGGCCCTGCAGCAGTGACCTCACAGGGGCTGCTCGCACTTTaGCCGCCACCGAGGACATGG +
Preference number: 4 (lower is better)
Translates to: GLAPTLSRQEGPAAVTSQGLLAL*PPPRTW
Trigger: CCATGTCCTCGGTGGCGGCCAAAGTGCGAGCAGCCC...CTGTGAGGTCACTGCTGCAGGGCCTTCCTGCCTGGACAGAGTTGGAGCTAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGCCTAGCTCCAACTCTGTCCAGGCAGGAAGGCCCTGCAGCAGTGACCTCACAGCCTCGTAGCAGCCGTTaGAGACGAGGGACAGGCGGC +
Preference number: 4 (lower is better)
Translates to: GLAPTLSRQEGPAAVTSQPRSSR*RRGTGG
Trigger: GCCGCCTGTCCCTCGTCTCCAACGGCTGCTACGAGG...CTGTGAGGTCACTGCTGCAGGGCCTTCCTGCCTGGACAGAGTTGGAGCTAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCGCCCCAGCCGGCTTTCATGGGGGTaGGGTCGCTCCAGGACCGGC +
Preference number: 4 (lower is better)
Translates to: NGHYEGIVHRSKPGPRPSRLSWG*GRSRTG
Trigger: GCCGGTCCTGGAGCGACCCCACCCCCATGAAAGCCG...GCTGGGGCGGGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265663.12
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GACGCTGGCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGCTGTCTCGGGAGTCGTaGGAAGTGTCGGCTTTCATG +
Preference number: 4 (lower is better)
Translates to: DAGPTHTGHPGAGDRYGRLSRES*EVSAFM
Trigger: CATGAAAGCCGACACTTCCCACGACTCCCGAGACAG...CCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGCCAGCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265663.12
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCGGCCCTTCCTTCTCCACTTTaGCAAAGGTGGCCACCTTGT +
Preference number: 4 (lower is better)
Translates to: VSAWPLSIHGPQGGILPALPSPL*QRWPPC
Trigger: ACAAGGTGGCCACCTTTGCCAAAGTGGAGAAGGAAG...GGCCGGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCGGCCACAGCTTCTCTCCATTaGGGTTCCCCAGAATGTAGC +
Preference number: 4 (lower is better)
Translates to: VSAWPLSIHGPQGGILPATASLH*GSPECS
Trigger: GCTACATTCTGGGGAACCCCAATGGAGAGAAGCTGT...GGCCGGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGCCTCCAGGCGAGGCATaGCAGGTCAGTGCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLPPGEA*QVSAWP
Trigger: CGGCCAGGCACTGACCTGCCATGCCTCGCCTGGAGG...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GACGCTGGCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGCTAAGTAAGCAGGGATaGGGGGTGGCAAGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: DAGPTHTGHPGAGDRYGRLSKQG*GVARGV
Trigger: CACTCCTCTTGCCACCCCCCATCCCTGCTTACTTAG...CCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGCCAGCGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CACACAGTGTGGCGTGAGGGACATACAGCCCTCTCCCTGGTGCCCTCAGGCGGCGACAGCCCATCCTGCTaGCCGTGGACAAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: HTVWREGHTALSLVPSGGDSPSC*PWTKAG
Trigger: CCCAGCTTTTGTCCACGGCCAGCAGGATGGGCTGTC...GCCGCCTGAGGGCACCAGGGAGAGGGCTGTATGTCCCTCACGCCACACTGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCCCTGGAAAGCACTGAGAGGACAGACCCACGCGGCGGCCGCGGTGGAGGATCAGCACAGGAAGGCCCCTaGAAAGCACTGAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: PLESTERTDPRGGRGGGSAQEGP*KALRGQ
Trigger: CTGTCCTCTCAGTGCTTTCCAGGGGCCTTCCTGTGC...TGATCCTCCACCGCGGCCGCCGCGTGGGTCTGTCCTCTCAGTGCTTTCCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCGCCCCAGCCCACCCCCAGCACACTaGGCCTCAAGCCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: NGHYEGIVHRSKPGPRPSPPPAH*ASSLPG
Trigger: GCCTGGCAGGCTTGAGGCCCAGTGTGCTGGGGGTGG...GCTGGGGCGGGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp CCCCTGGAAAGCACTGAGAGGACAGACCCACGCGGCGGCCGCGGTGGAGGATCATTGCGGTTCTCAGGGTaGCTCTGGGACAGGTACTCT +
Preference number: 4 (lower is better)
Translates to: PLESTERTDPRGGRGGGSLRFSG*LWDRYS
Trigger: AGAGTACCTGTCCCAGAGTCACCCTGAGAACCGCAA...TGATCCTCCACCGCGGCCGCCGCGTGGGTCTGTCCTCTCAGTGCTTTCCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp CCTGAGCAACGTCTGAGGTGCCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACAAATGCTGGGCTCCTCTaGGAGGCTGCCCTCGTAGCA +
Preference number: 4 (lower is better)
Translates to: PEQRLRCPEVAPGETGATNAGLL*EAALVA
Trigger: TGCTACGAGGGCAGCCTCTCAGAGGAGCCCAGCATT...TGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GACGCTGGCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGTGGCCACCTTGTTCTTaGGGAGATAGAGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: DAGPTHTGHPGAGDRYGRWPPCS*GDRGVQ
Trigger: CTGGACACCTCTATCTCCTCAAGAACAAGGTGGCCA...CCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGCCAGCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GCAGGTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCAGCCGCTTCCAGAAGTaGATCATGTCCTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: AGQCLAAEHPRATGRDPPSRFQK*IMSSSF
Trigger: GAAGGAAGAGGACATGATTCACTTCTGGAAGCGGCT...GGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGACCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGAGGGGGAGCCGCTTCCAGAAGTaGATCATGTCCTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: APRTRATLVLVIDTAGRGSRFQK*IMSSSF
Trigger: GAAGGAAGAGGACATGATTCACTTCTGGAAGCGGCT...CCCCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp CCCTCGCCCCAGCTATATACACGACAGCCCATCCTGCTGGCCGTGGACAAAAGCCCCACAGGGGGAACCTaGGCAACGTCTGAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PSPQLYTRQPILLAVDKSPTGGT*ATSEVP
Trigger: GGGCACCTCAGACGTTGCTCAGGTTCCCCCTGTGGG...GCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTGTATATAGCTGGGGCGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGCCCACAGGGGGAACCTaGGCAACGTCTGAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLPTGGT*ATSEVP
Trigger: GGGCACCTCAGACGTTGCTCAGGTTCCCCCTGTGGG...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp CCCTCGCCCCAGCTATATACACGACAGCCCATCCTGCTGGCCGTGGACAAAAGCGGGCAGGGAGGGTCCTaGACACATGTGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PSPQLYTRQPILLAVDKSGQGGS*THVGCW
Trigger: CCAGCAGCCCACATGTGTTCAGGACCCTCCCTGCCC...GCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTGTATATAGCTGGGGCGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGGCCCCTGGAAAGCACTaGGAGGACAGACCCACGCGG +
Preference number: 4 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLAPGKH*EDRPTR
Trigger: CCGCGTGGGTCTGTCCTCTCAGTGCTTTCCAGGGGC...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGAAGGCCCTGCAGCAGTaGCCTCACAGGAGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLKALQQ*PHRSGP
Trigger: GGGCCCACTCCTGTGAGGTCACTGCTGCAGGGCCTT...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp CCCTCGCCCCAGCTATATACACGACAGCCCATCCTGCTGGCCGTGGACAAAAGCAAGGCCCTGCAGCAGTaGCCTCACAGGAGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: PSPQLYTRQPILLAVDKSKALQQ*PHRSGP
Trigger: GGGCCCACTCCTGTGAGGTCACTGCTGCAGGGCCTT...GCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTGTATATAGCTGGGGCGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGTGGCTGACGGCTGTGTaGCCACCCCCAGCACACTGG +
Preference number: 4 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLWLTAV*PPPAHW
Trigger: CCAGTGTGCTGGGGGTGGTCACACAGCCGTCAGCCA...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CCCTCGCCCCAGCTATATACACGACAGCCCATCCTGCTGGCCGTGGACAAAAGCCTGAGGGCCCTCGCCTaGGGGCTTCCTAATGCTGGG +
Preference number: 4 (lower is better)
Translates to: PSPQLYTRQPILLAVDKSLRALA*GLPNAG
Trigger: CCCAGCATTAGGAAGCCCGCAGGCGAGGGCCCTCAG...GCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTGTATATAGCTGGGGCGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GACAGAGCCAGGCTGGGCAGCCCGGCGACGCTGGCCCCACGCACACGGGCCACCTTGCATAGTTGTGGTTaGTGTCTGGAAGCTGAAAAG +
Preference number: 4 (lower is better)
Translates to: DRARLGSPATLAPRTRATLHSCG*CLEAEK
Trigger: CTTTTCAGCTTCCAGACAGCAACCACAACTATGCAA...GGTGGCCCGTGTGCGTGGGGCCAGCGTCGCCGGGCTGCCCAGCCTGGCTCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CCCCACCCAGAGCCTCCTCTGAAGGAGGGGACGCTGCGCCCTTCCTTCCTGCTGAGGGGCCCACTGTGGTaGCAGCGAGTTTCTCAAAAC +
Preference number: 4 (lower is better)
Translates to: PHPEPPLKEGTLRPSFLLRGPLW*QRVSQN
Trigger: GTTTTGAGAAACTCGCTGGCACCACAGTGGGCCCCT...CAGCAGGAAGGAAGGGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GGCCTAGCTCCAACTCTGTCCAGGCAGGAAGGCCCTGCAGCAGTGACCTCACAGAGCTGGGAGCTCCTGTaGCCAGTCAGGAGCCCCTAC +
Preference number: 4 (lower is better)
Translates to: GLAPTLSRQEGPAAVTSQSWELL*PVRSPY
Trigger: GTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCT...CTGTGAGGTCACTGCTGCAGGGCCTTCCTGCCTGGACAGAGTTGGAGCTAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGAAGCCTGCCAGGCTGTaGCAGGCTGCGCACCAGTGG +
Preference number: 4 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLKPARL*QAAHQW
Trigger: CCACTGGTGCGCAGCCTGGCACAGCCTGGCAGGCTT...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGCCTAGCTCCAACTCTGTCCAGGCAGGAAGGCCCTGCAGCAGTGACCTCACAGTCAGGCAGAGGTGGCTaGTCCAGCCCAAAGGCCCGA +
Preference number: 4 (lower is better)
Translates to: GLAPTLSRQEGPAAVTSQSGRGG*SSPKAR
Trigger: TCGGGCCTTTGGGCTGGACCAGCCACCTCTGCCTGA...CTGTGAGGTCACTGCTGCAGGGCCTTCCTGCCTGGACAGAGTTGGAGCTAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCAGGTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCAATGAGCATGACCTTTaGTGGCACGAAGCCTTCGGT +
Preference number: 4 (lower is better)
Translates to: AGQCLAAEHPRATGRDPPNEHDL*WHEAFG
Trigger: ACCGAAGGCTTCGTGCCACCAAAGGTCATGCTCATT...GGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGACCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCCTCTGCGGCCACGGGTGCAGCGAGGACCGGAACCCACAGGGGGAACCTGAGCAATGAGCATGACCTTTaGTGGCACGAAGCCTTCGGT +
Preference number: 4 (lower is better)
Translates to: ASAATGAARTGTHRGNLSNEHDL*WHEAFG
Trigger: ACCGAAGGCTTCGTGCCACCAAAGGTCATGCTCATT...GCTCAGGTTCCCCCTGTGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCGGCCTGTCCAGGACCTCCCTaGCAGAAAATCAGCATTTTC +
Preference number: 4 (lower is better)
Translates to: VSAWPLSIHGPQGGILPACPGPP*QKISIF
Trigger: GAAAATGCTGATTTTCTGCCAGGGAGGTCCTGGACA...GGCCGGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGAGGGGGCTTCCTTCTCCACTTTaGCAAAGGTGGCCACCTTGT +
Preference number: 4 (lower is better)
Translates to: APRTRATLVLVIDTAGRGLPSPL*QRWPPC
Trigger: ACAAGGTGGCCACCTTTGCCAAAGTGGAGAAGGAAG...CCCCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGAGGGGGAGGGTCCTGAGGTTCTaGAACAGCTTCTCTCCATTG +
Preference number: 4 (lower is better)
Translates to: APRTRATLVLVIDTAGRGRVLRF*NSFSPL
Trigger: CAATGGAGAGAAGCTGTTCCAGAACCTCAGGACCCT...CCCCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCCTCTGCGGCCACGGGTGCAGCGAGGACCGGAACCCACAGGGGGAACCTGAGCAGGGTCCTGAGGTTCTaGAACAGCTTCTCTCCATTG +
Preference number: 4 (lower is better)
Translates to: ASAATGAARTGTHRGNLSRVLRF*NSFSPL
Trigger: CAATGGAGAGAAGCTGTTCCAGAACCTCAGGACCCT...GCTCAGGTTCCCCCTGTGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCGCCCCAGCTGGCCTGATGGTGACTaGGCGGAGGCCTCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: NGHYEGIVHRSKPGPRPSWPDGD*AEASAP
Trigger: AGGGGCAGAGGCCTCCGCCCAGTCACCATCAGGCCA...GCTGGGGCGGGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGTGGCCTGATGGTGACTaGGCGGAGGCCTCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLWPDGD*AEASAP
Trigger: AGGGGCAGAGGCCTCCGCCCAGTCACCATCAGGCCA...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGTGGCAGGTCAGTGCCTaGCCGCTGAGCATCCACGGG +
Preference number: 4 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLWQVSA*PLSIHG
Trigger: CCCGTGGATGCTCAGCGGCCAGGCACTGACCTGCCA...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCGCCCCAGCCAGCCCTCCCTCAGCTaGGAACACAGCCAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: NGHYEGIVHRSKPGPRPSQPSLS*EHSQVP
Trigger: GGGCACCTGGCTGTGTTCCCAGCTGAGGGAGGGCTG...GCTGGGGCGGGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCCTCGCCCCAGCTATATACACGACAGCCCATCCTGCTGGCCGTGGACAAAAGCCTGTGCTGGTCCCCCTaGCTATGCCCTGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PSPQLYTRQPILLAVDKSLCWSP*LCPVGW
Trigger: CCACCCCACAGGGCATAGCCAGGGGGACCAGCACAG...GCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTGTATATAGCTGGGGCGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGCGTCCCCTCCTGTGCTaGTCCCCCTGGCTATGCCCT +
Preference number: 4 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLRPLLC*SPWLCP
Trigger: AGGGCATAGCCAGGGGGACCAGCACAGGAGGGGACG...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGATACAGCCCTCTCCCTaGTGCCCTCAGGCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLIQPSP*CPQAAG
Trigger: CCCTGCCGCCTGAGGGCACCAGGGAGAGGGCTGTAT...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGGCATCAGCCAGCAGGTaGTCTGCGCCGTTGCGGTTC +
Preference number: 4 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLASASR*SAPLRF
Trigger: GAACCGCAACGGCGCAGATCACCTGCTGGCTGATGC...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCGGCCTTGCTGTCTGGAAGCTaGAAAGATTTTCCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: VSAWPLSIHGPQGGILPALLSGS*KDFPWG
Trigger: TCCCCAAGGAAAATCTTTTCAGCTTCCAGACAGCAA...GGCCGGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GCCTCTGCGGCCACGGGTGCAGCGAGGACCGGAACCCACAGGGGGAACCTGAGCTTGCACTTATTTCTATaGACCCCATGGAGGGATGCC +
Preference number: 4 (lower is better)
Translates to: ASAATGAARTGTHRGNLSLHLFL*TPWRDA
Trigger: GGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAA...GCTCAGGTTCCCCCTGTGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GGCCTAGCTCCAACTCTGTCCAGGCAGGAAGGCCCTGCAGCAGTGACCTCACAGTCCTCTCCAGCTTCTTaGGGCGACCGGAGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: GLAPTLSRQEGPAAVTSQSSPAS*GDRRSQ
Trigger: CTGAGACCTCCGGTCGCCGCAAGAAGCTGGAGAGGA...CTGTGAGGTCACTGCTGCAGGGCCTTCCTGCCTGGACAGAGTTGGAGCTAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGAGGCCTCGTCCAGCGTaGAGTGGGAGCTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLRPRPA*SGSSAG
Trigger: ACCTGCAGAGCTCCCACTGCACGCTGGACGAGGCCT...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CCCTCGCCCCAGCTATATACACGACAGCCCATCCTGCTGGCCGTGGACAAAAGCAGGCCTCGTCCAGCGTaGAGTGGGAGCTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PSPQLYTRQPILLAVDKSRPRPA*SGSSAG
Trigger: ACCTGCAGAGCTCCCACTGCACGCTGGACGAGGCCT...GCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTGTATATAGCTGGGGCGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGAGCTGGGAGCTCCTGTaGCCAGTCAGGAGCCCCTAC +
Preference number: 4 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLSWELL*PVRSPY
Trigger: GTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCT...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CCCTCGCCCCAGCTATATACACGACAGCCCATCCTGCTGGCCGTGGACAAAAGCAGCTGGGAGCTCCTGTaGCCAGTCAGGAGCCCCTAC +
Preference number: 4 (lower is better)
Translates to: PSPQLYTRQPILLAVDKSSWELL*PVRSPY
Trigger: GTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCT...GCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTGTATATAGCTGGGGCGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AGGAGTGTAAGTGAAAGCACAGACAGTCGGAGACTCGGCCAGTGTAGACAGACCCCTCCGCCTCAGGGCTaGGCAGCAGGGCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: RSVSESTDSRRLGQCRQTPPPQG*AAGQAP
Trigger: GGGAGCCTGCCCTGCTGCCCAGCCCTGAGGCGGAGG...GGTCTGTCTACACTGGCCGAGTCTCCGACTGTCTGTGCTTTCACTTACACTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCCTCGCCCCAGCTATATACACGACAGCCCATCCTGCTGGCCGTGGACAAAAGCTCAGGCAGAGGTGGCTaGTCCAGCCCAAAGGCCCGA +
Preference number: 4 (lower is better)
Translates to: PSPQLYTRQPILLAVDKSSGRGG*SSPKAR
Trigger: TCGGGCCTTTGGGCTGGACCAGCCACCTCTGCCTGA...GCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTGTATATAGCTGGGGCGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCGCCCCAGCTCAGGCAGAGGTGGCTaGTCCAGCCCAAAGGCCCGA +
Preference number: 4 (lower is better)
Translates to: NGHYEGIVHRSKPGPRPSSGRGG*SSPKAR
Trigger: TCGGGCCTTTGGGCTGGACCAGCCACCTCTGCCTGA...GCTGGGGCGGGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGAGGGGGTTGCGGAAGTTCCTCTaGATTACAGACGCGGAATCA +
Preference number: 4 (lower is better)
Translates to: APRTRATLVLVIDTAGRGLRKFL*ITDAES
Trigger: TGATTCCGCGTCTGTAATCCAGAGGAACTTCCGCAA...CCCCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371475.9
CDS-3UTR CCA 90 bp CACACAGTGTGGCGTGAGGGACATACAGCCCTCTCCCTGGTGCCCTCAGGCGGCCTGTCTCGGGAGTCGTaGGAAGTGTCGGCTTTCATG +
Preference number: 4 (lower is better)
Translates to: HTVWREGHTALSLVPSGGLSRES*EVSAFM
Trigger: CATGAAAGCCGACACTTCCCACGACTCCCGAGACAG...GCCGCCTGAGGGCACCAGGGAGAGGGCTGTATGTCCCTCACGCCACACTGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGCCTAGCTCCAACTCTGTCCAGGCAGGAAGGCCCTGCAGCAGTGACCTCACAGTCGTCCAGCGTGCAGTaGGAGCTCTGCAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: GLAPTLSRQEGPAAVTSQSSSVQ*ELCRSL
Trigger: CAGTGACCTGCAGAGCTCCCACTGCACGCTGGACGA...CTGTGAGGTCACTGCTGCAGGGCCTTCCTGCCTGGACAGAGTTGGAGCTAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCCTCTGCGGCCACGGGTGCAGCGAGGACCGGAACCCACAGGGGGAACCTGAGCGCATTTTCCAGATCTTaGCTCCCTTGTGGTAGACGT +
Preference number: 4 (lower is better)
Translates to: ASAATGAARTGTHRGNLSAFSRS*LPCGRR
Trigger: ACGTCTACCACAAGGGAGCCAAGATCTGGAAAATGC...GCTCAGGTTCCCCCTGTGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CACACAGTGTGGCGTGAGGGACATACAGCCCTCTCCCTGGTGCCCTCAGGCGGCCTAAGTAAGCAGGGATaGGGGGTGGCAAGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: HTVWREGHTALSLVPSGGLSKQG*GVARGV
Trigger: CACTCCTCTTGCCACCCCCCATCCCTGCTTACTTAG...GCCGCCTGAGGGCACCAGGGAGAGGGCTGTATGTCCCTCACGCCACACTGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCTGAGCAACGTCTGAGGTGCCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACATCCAGGGGCCCACTGTaGTGCCAGCGAGTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: PEQRLRCPEVAPGETGATSRGPL*CQRVSQ
Trigger: TTGAGAAACTCGCTGGCACCACAGTGGGCCCCTGGA...TGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGAATGCTGGGCTCCTCTaGGAGGCTGCCCTCGTAGCA +
Preference number: 4 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLNAGLL*EAALVA
Trigger: TGCTACGAGGGCAGCCTCTCAGAGGAGCCCAGCATT...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp AGGAGTGTAAGTGAAAGCACAGACAGTCGGAGACTCGGCCAGTGTAGACAGACCGTGTACACTCGAGGCTaGGGGCCCTCGCCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: RSVSESTDSRRLGQCRQTVYTRG*GPSPAG
Trigger: GCCCGCAGGCGAGGGCCCTCAGCCTCGAGTGTACAC...GGTCTGTCTACACTGGCCGAGTCTCCGACTGTCTGTGCTTTCACTTACACTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp AGGAGTGTAAGTGAAAGCACAGACAGTCGGAGACTCGGCCAGTGTAGACAGACCTCTGGCAGGGCCTGCTaGCGTCCTCCCGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: RSVSESTDSRRLGQCRQTSGRAC*RPPGCH
Trigger: GTGGCAGCCGGGAGGACGTCAGCAGGCCCTGCCAGA...GGTCTGTCTACACTGGCCGAGTCTCCGACTGTCTGTGCTTTCACTTACACTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GCAGGTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCTTGCTGTCTGGAAGCTaGAAAGATTTTCCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: AGQCLAAEHPRATGRDPPLLSGS*KDFPWG
Trigger: TCCCCAAGGAAAATCTTTTCAGCTTCCAGACAGCAA...GGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp CCCCACCCAGAGCCTCCTCTGAAGGAGGGGACGCTGCGCCCTTCCTTCCTGCTGAGCCGCTTCCAGAAGTaGATCATGTCCTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: PHPEPPLKEGTLRPSFLLSRFQK*IMSSSF
Trigger: GAAGGAAGAGGACATGATTCACTTCTGGAAGCGGCT...CAGCAGGAAGGAAGGGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GGCCTAGCTCCAACTCTGTCCAGGCAGGAAGGCCCTGCAGCAGTGACCTCACAGGGTGATCTGCGCCGTTaGGGTTCTCAGGGTGACTCT +
Preference number: 4 (lower is better)
Translates to: GLAPTLSRQEGPAAVTSQGDLRR*GSQGDS
Trigger: AGAGTCACCCTGAGAACCGCAACGGCGCAGATCACC...CTGTGAGGTCACTGCTGCAGGGCCTTCCTGCCTGGACAGAGTTGGAGCTAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGAGCCAGCAGGTGATCTaGGCCGTTGCGGTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLSQQVI*AVAVLR
Trigger: CCTGAGAACCGCAACGGCGCAGATCACCTGCTGGCT...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCTGGAGCCCTGGCGGCTaGCCGCCCAGCTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPWSPGG*PPSSGR
Trigger: CCTGCCAGAGCTGGGCGGGCAGCCGCCAGGGCTCCA...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGTCCGGCTGCCGACCATaGGCAGGTGTTTGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLSGCRP*AGVCGS
Trigger: ACTTCCGCAAACACCTGCGCATGGTCGGCAGCCGGA...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AGGAGTGTAAGTGAAAGCACAGACAGTCGGAGACTCGGCCAGTGTAGACAGACCCCGCCACCGAGGACATaGCCTCGCTCCTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: RSVSESTDSRRLGQCRQTPPPRT*PRSSAP
Trigger: GGGCGCTGAGGAGCGAGGCCATGTCCTCGGTGGCGG...GGTCTGTCTACACTGGCCGAGTCTCCGACTGTCTGTGCTTTCACTTACACTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCGGCTGCCACCAGGGCTaGCGCGCAGGGGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPGCHQG*RAGAGC
Trigger: ACAGCCAGCCCCTGCGCGCCAGCCCTGGTGGCAGCC...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCGGCTGCCACCAGGGCTaGCGCGCAGGGGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GSGLMVTMRVSYIVPSPAGCHQG*RAGAGC
Trigger: ACAGCCAGCCCCTGCGCGCCAGCCCTGGTGGCAGCC...GGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCGGCCGTTGTGGTTGCTGTCTaGAAGCTGAAAAGATTTTCC +
Preference number: 4 (lower is better)
Translates to: VSAWPLSIHGPQGGILPAVVVAV*KLKRFS
Trigger: GGAAAATCTTTTCAGCTTCCAGACAGCAACCACAAC...GGCCGGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCTGAGCAACGTCTGAGGTGCCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACACTGTCTCGGGAGTCGTaGGAAGTGTCGGCTTTCATG +
Preference number: 4 (lower is better)
Translates to: PEQRLRCPEVAPGETGATLSRES*EVSAFM
Trigger: CATGAAAGCCGACACTTCCCACGACTCCCGAGACAG...TGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265663.12
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGTCGTCCAGCGTGCAGTaGGAGCTCTGCAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLSSSVQ*ELCRSL
Trigger: CAGTGACCTGCAGAGCTCCCACTGCACGCTGGACGA...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCCCACCCAGAGCCTCCTCTGAAGGAGGGGACGCTGCGCCCTTCCTTCCTGCTGACAGCTTCTCTCCATTaGGGTTCCCCAGAATGTAGC +
Preference number: 4 (lower is better)
Translates to: PHPEPPLKEGTLRPSFLLTASLH*GSPECS
Trigger: GCTACATTCTGGGGAACCCCAATGGAGAGAAGCTGT...CAGCAGGAAGGAAGGGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCCCTGGAAAGCACTGAGAGGACAGACCCACGCGGCGGCCGCGGTGGAGGATCAAGGGTCCTGAGGTTCTaGAACAGCTTCTCTCCATTG +
Preference number: 4 (lower is better)
Translates to: PLESTERTDPRGGRGGGSRVLRF*NSFSPL
Trigger: CAATGGAGAGAAGCTGTTCCAGAACCTCAGGACCCT...TGATCCTCCACCGCGGCCGCCGCGTGGGTCTGTCCTCTCAGTGCTTTCCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCCTCGCCCCAGCTATATACACGACAGCCCATCCTGCTGGCCGTGGACAAAAGCAGCAGCTTCGAGTGCTaGCGGCTCTTCCACAGGCGA +
Preference number: 4 (lower is better)
Translates to: PSPQLYTRQPILLAVDKSSSFEC*RLFHRR
Trigger: TCGCCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCT...GCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTGTATATAGCTGGGGCGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCTGAGCAACGTCTGAGGTGCCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACACTAAGTAAGCAGGGATaGGGGGTGGCAAGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: PEQRLRCPEVAPGETGATLSKQG*GVARGV
Trigger: CACTCCTCTTGCCACCCCCCATCCCTGCTTACTTAG...TGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCCTCGCCCCAGCTATATACACGACAGCCCATCCTGCTGGCCGTGGACAAAAGCCCATCCTGCTGGCCGTaGACAAAAGCTGGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PSPQLYTRQPILLAVDKSPSCWP*TKAGSS
Trigger: GGAGCTCCCAGCTTTTGTCCACGGCCAGCAGGATGG...GCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTGTATATAGCTGGGGCGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGCCTAGCTCCAACTCTGTCCAGGCAGGAAGGCCCTGCAGCAGTGACCTCACAGGCACAGGAAGGCCCCTaGAAAGCACTGAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: GLAPTLSRQEGPAAVTSQAQEGP*KALRGQ
Trigger: CTGTCCTCTCAGTGCTTTCCAGGGGCCTTCCTGTGC...CTGTGAGGTCACTGCTGCAGGGCCTTCCTGCCTGGACAGAGTTGGAGCTAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCGTGTACACTCGAGGCTaGGGGCCCTCGCCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPVYTRG*GPSPAG
Trigger: GCCCGCAGGCGAGGGCCCTCAGCCTCGAGTGTACAC...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGCGCTCCAGGACCGGCTaGAGCTCCGCTCGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: GGSGLMVTMRVSYIVPSPRSRTG*SSARAA
Trigger: AGCGGCGCGAGCGGAGCTTCAGCCGGTCCTGGAGCG...CGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371472.6
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp CCTGAGCAACGTCTGAGGTGCCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACATGGCCACCTTGTTCTTaGGGAGATAGAGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: PEQRLRCPEVAPGETGATWPPCS*GDRGVQ
Trigger: CTGGACACCTCTATCTCCTCAAGAACAAGGTGGCCA...TGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp AGGAGTGTAAGTGAAAGCACAGACAGTCGGAGACTCGGCCAGTGTAGACAGACCTCAGTGCCTGGCCGCTaGGCATCCACGGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: RSVSESTDSRRLGQCRQTSVPGR*ASTGHR
Trigger: CCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGA...GGTCTGTCTACACTGGCCGAGTCTCCGACTGTCTGTGCTTTCACTTACACTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp AGGAGTGTAAGTGAAAGCACAGACAGTCGGAGACTCGGCCAGTGTAGACAGACCACCCAGAGCCTCCTCTaGAGGAGGGGACGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: RSVSESTDSRRLGQCRQTTQSLL*RRGRCA
Trigger: GGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGT...GGTCTGTCTACACTGGCCGAGTCTCCGACTGTCTGTGCTTTCACTTACACTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGGGTGATCTGCGCCGTTaGGGTTCTCAGGGTGACTCT +
Preference number: 4 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLGDLRR*GSQGDS
Trigger: AGAGTCACCCTGAGAACCGCAACGGCGCAGATCACC...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GCCTCTGCGGCCACGGGTGCAGCGAGGACCGGAACCCACAGGGGGAACCTGAGCTTGCATAGTTGTGGTTaGTGTCTGGAAGCTGAAAAG +
Preference number: 4 (lower is better)
Translates to: ASAATGAARTGTHRGNLSLHSCG*CLEAEK
Trigger: CTTTTCAGCTTCCAGACAGCAACCACAACTATGCAA...GCTCAGGTTCCCCCTGTGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp AGGAGTGTAAGTGAAAGCACAGACAGTCGGAGACTCGGCCAGTGTAGACAGACCCTGGGCGGAGGCCTCTaGCCCTCACAGGACGTCGTC +
Preference number: 4 (lower is better)
Translates to: RSVSESTDSRRLGQCRQTLGGGL*PSQDVV
Trigger: GACGACGTCCTGTGAGGGGCAGAGGCCTCCGCCCAG...GGTCTGTCTACACTGGCCGAGTCTCCGACTGTCTGTGCTTTCACTTACACTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCTACAGTCCACCAGCTaGGCGGCCGGGTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GSGLMVTMRVSYIVPSPALQSTS*AAGSRG
Trigger: GCCCCTGGACCCGGCCGCGCAGCTGGTGGACTGTAG...GGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCACTCCTTGGAGCCCTaGCGGCTGCCCGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPHSLEP*RLPAQL
Trigger: GAGCTGGGCGGGCAGCCGCCAGGGCTCCAAGGAGTG...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCATCCGGGGCACTCCTTaGAGCCCTGGCGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPIRGTP*SPGGCP
Trigger: CGGGCAGCCGCCAGGGCTCCAAGGAGTGCCCCGGAT...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CACACAGTGTGGCGTGAGGGACATACAGCCCTCTCCCTGGTGCCCTCAGGCGGCAATGAGCATGACCTTTaGTGGCACGAAGCCTTCGGT +
Preference number: 4 (lower is better)
Translates to: HTVWREGHTALSLVPSGGNEHDL*WHEAFG
Trigger: ACCGAAGGCTTCGTGCCACCAAAGGTCATGCTCATT...GCCGCCTGAGGGCACCAGGGAGAGGGCTGTATGTCCCTCACGCCACACTGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCCCACCCAGAGCCTCCTCTGAAGGAGGGGACGCTGCGCCCTTCCTTCCTGCTGTGTCCAGGACCTCCCTaGCAGAAAATCAGCATTTTC +
Preference number: 4 (lower is better)
Translates to: PHPEPPLKEGTLRPSFLLCPGPP*QKISIF
Trigger: GAAAATGCTGATTTTCTGCCAGGGAGGTCCTGGACA...CAGCAGGAAGGAAGGGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCCCTGGAAAGCACTGAGAGGACAGACCCACGCGGCGGCCGCGGTGGAGGATCATGTCCAGGACCTCCCTaGCAGAAAATCAGCATTTTC +
Preference number: 4 (lower is better)
Translates to: PLESTERTDPRGGRGGGSCPGPP*QKISIF
Trigger: GAAAATGCTGATTTTCTGCCAGGGAGGTCCTGGACA...TGATCCTCCACCGCGGCCGCCGCGTGGGTCTGTCCTCTCAGTGCTTTCCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GCAGGAAGGCCCTGCAGCAGTGACCTCACAGGAGTGGGCCCAGAAGCTGGGCACGATGACGTTCGGCTCTaGGTTCACTTTGCTCATCAG +
Preference number: 4 (lower is better)
Translates to: AGRPCSSDLTGVGPEAGHDDVRL*VHFAHQ
Trigger: CTGATGAGCAAAGTGAACCCAGAGCCGAACGTCATC...GTGCCCAGCTTCTGGGCCCACTCCTGTGAGGTCACTGCTGCAGGGCCTTCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AGGAGTGTAAGTGAAAGCACAGACAGTCGGAGACTCGGCCAGTGTAGACAGACCCCTCCAGGCGAGGCATaGCAGGTCAGTGCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: RSVSESTDSRRLGQCRQTPPGEA*QVSAWP
Trigger: CGGCCAGGCACTGACCTGCCATGCCTCGCCTGGAGG...GGTCTGTCTACACTGGCCGAGTCTCCGACTGTCTGTGCTTTCACTTACACTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGTCCAGGGGCCCACTGTaGTGCCAGCGAGTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLSRGPL*CQRVSQ
Trigger: TTGAGAAACTCGCTGGCACCACAGTGGGCCCCTGGA...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGGCACAGGAAGGCCCCTaGAAAGCACTGAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLAQEGP*KALRGQ
Trigger: CTGTCCTCTCAGTGCTTTCCAGGGGCCTTCCTGTGC...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp AATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCGCCCCAGCTTGCGGTTCTCAGGGTaGCTCTGGGACAGGTACTCT +
Preference number: 4 (lower is better)
Translates to: NGHYEGIVHRSKPGPRPSLRFSG*LWDRYS
Trigger: AGAGTACCTGTCCCAGAGTCACCCTGAGAACCGCAA...GCTGGGGCGGGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGTCTGGCAGGGCCTGCTaGCGTCCTCCCGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GGSGLMVTMRVSYIVPSPSGRAC*RPPGCH
Trigger: GTGGCAGCCGGGAGGACGTCAGCAGGCCCTGCCAGA...CGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp CGCGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCATCTGGCAGGGCCTGCTaGCGTCCTCCCGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: RGGGSGLMVTMRVSYIVPSGRAC*RPPGCH
Trigger: GTGGCAGCCGGGAGGACGTCAGCAGGCCCTGCCAGA...TGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp CCCCACCCAGAGCCTCCTCTGAAGGAGGGGACGCTGCGCCCTTCCTTCCTGCTGTTGCTGTCTGGAAGCTaGAAAGATTTTCCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: PHPEPPLKEGTLRPSFLLLLSGS*KDFPWG
Trigger: TCCCCAAGGAAAATCTTTTCAGCTTCCAGACAGCAA...CAGCAGGAAGGAAGGGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCTGGAGCCCTGGCGGCTaGCCGCCCAGCTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GGGSGLMVTMRVSYIVPSWSPGG*PPSSGR
Trigger: CCTGCCAGAGCTGGGCGGGCAGCCGCCAGGGCTCCA...GCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GGCCTAGCTCCAACTCTGTCCAGGCAGGAAGGCCCTGCAGCAGTGACCTCACAGTACGTCTCGATCATCTaGTTCCCTTGGGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: GLAPTLSRQEGPAAVTSQYVSII*FPWAES
Trigger: GCTCTCAGCCCAAGGGAAGCAGATGATCGAGACGTA...CTGTGAGGTCACTGCTGCAGGGCCTTCCTGCCTGGACAGAGTTGGAGCTAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCTGGGCGGAGGCCTCTaGCCCTCACAGGACGTCGTC +
Preference number: 4 (lower is better)
Translates to: GSGLMVTMRVSYIVPSPALGGGL*PSQDVV
Trigger: GACGACGTCCTGTGAGGGGCAGAGGCCTCCGCCCAG...GGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCAGGGACTGCAGCCTCTaGGGCCACGGGTGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: GSGLMVTMRVSYIVPSPARDCSL*GHGCSE
Trigger: CTCGCTGCACCCGTGGCCGCAGAGGCTGCAGTCCCT...GGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCTGTGGGCTGCTGGGCTaGTGGGCCGGGGTGCCTACA +
Preference number: 4 (lower is better)
Translates to: GSGLMVTMRVSYIVPSPACGLLG*WAGVPT
Trigger: TGTAGGCACCCCGGCCCAGCAGCCCAGCAGCCCACA...GGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGAGGGGCCCACTGTGGTaGCAGCGAGTTTCTCAAAAC +
Preference number: 4 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLRGPLW*QRVSQN
Trigger: GTTTTGAGAAACTCGCTGGCACCACAGTGGGCCCCT...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CCCTCGCCCCAGCTATATACACGACAGCCCATCCTGCTGGCCGTGGACAAAAGCAGGGGCCCACTGTGGTaGCAGCGAGTTTCTCAAAAC +
Preference number: 4 (lower is better)
Translates to: PSPQLYTRQPILLAVDKSRGPLW*QRVSQN
Trigger: GTTTTGAGAAACTCGCTGGCACCACAGTGGGCCCCT...GCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTGTATATAGCTGGGGCGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CGCGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCACTACAGTCCACCAGCTaGGCGGCCGGGTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RGGGSGLMVTMRVSYIVPLQSTS*AAGSRG
Trigger: GCCCCTGGACCCGGCCGCGCAGCTGGTGGACTGTAG...TGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CACACAGTGTGGCGTGAGGGACATACAGCCCTCTCCCTGGTGCCCTCAGGCGGCAACACCGAGATGGCTTaGATAGTTGTGGTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: HTVWREGHTALSLVPSGGNTEMA*IVVVAV
Trigger: GACAGCAACCACAACTATGCAAGCCATCTCGGTGTT...GCCGCCTGAGGGCACCAGGGAGAGGGCTGTATGTCCCTCACGCCACACTGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371473.7
ENST00000371475.9
CDS-3UTR GCA 90 bp AGGAGTGTAAGTGAAAGCACAGACAGTCGGAGACTCGGCCAGTGTAGACAGACCGGAACGGGCTGTCTCTaGTGTCCCCTCCAGACCCGG +
Preference number: 4 (lower is better)
Translates to: RSVSESTDSRRLGQCRQTGTGCL*CPLQTR
Trigger: CCGGGTCTGGAGGGGACAGCAGAGACAGCCCGTTCC...GGTCTGTCTACACTGGCCGAGTCTCCGACTGTCTGTGCTTTCACTTACACTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCTCAGCGCCCTCCTCCTaGAGGCGGCGGCGCCCATGG +
Preference number: 4 (lower is better)
Translates to: WRIRFNGHYEGIVHRSKPSAPSS*RRRRPW
Trigger: CCATGGGCGCCGCCGCCTCCAGGAGGAGGGCGCTGA...GGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGCCGCCACCGAGGACATaGCCTCGCTCCTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: GGSGLMVTMRVSYIVPSPPPPRT*PRSSAP
Trigger: GGGCGCTGAGGAGCGAGGCCATGTCCTCGGTGGCGG...CGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCTCCGCCTCAGGGCTaGGCAGCAGGGCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: GGGSGLMVTMRVSYIVPSPPPQG*AAGQAP
Trigger: GGGAGCCTGCCCTGCTGCCCAGCCCTGAGGCGGAGG...GCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCCACCGCCAGCTCAATaGCCTCCGCCTCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPPPPAQ*PPPQGW
Trigger: CCAGCCCTGAGGCGGAGGCCATTGAGCTGGCGGTGG...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCACCGCCAGCTCAATaGCCTCCGCCTCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GSGLMVTMRVSYIVPSPAPPPAQ*PPPQGW
Trigger: CCAGCCCTGAGGCGGAGGCCATTGAGCTGGCGGTGG...GGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCTGCCACCAGGGCTaGCGCGCAGGGGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: WRIRFNGHYEGIVHRSKPGCHQG*RAGAGC
Trigger: ACAGCCAGCCCCTGCGCGCCAGCCCTGGTGGCAGCC...GGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGCTGCCCGCCCAGCTCTaGCAGGGCCTGCTGACGTCC +
Preference number: 4 (lower is better)
Translates to: GGSGLMVTMRVSYIVPSPLPAQL*QGLLTS
Trigger: GGACGTCAGCAGGCCCTGCCAGAGCTGGGCGGGCAG...CGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CGCGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAGGGCCAGGAGCCAGCTaGGCACATCCGGGGCACTCC +
Preference number: 4 (lower is better)
Translates to: RGGGSGLMVTMRVSYIVPGPGAS*AHPGHS
Trigger: GGAGTGCCCCGGATGTGCCCAGCTGGCTCCTGGCCC...TGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGCAAAGGCCCGAGGGGTaGGGCCAGGAGCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GGSGLMVTMRVSYIVPSPQRPEG*GQEPAG
Trigger: CCCAGCTGGCTCCTGGCCCCACCCCTCGGGCCTTTG...CGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CGCGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCACAAAGGCCCGAGGGGTaGGGCCAGGAGCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: RGGGSGLMVTMRVSYIVPQRPEG*GQEPAG
Trigger: CCCAGCTGGCTCCTGGCCCCACCCCTCGGGCCTTTG...TGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCGGCTTTCATGGGGGTaGGGTCGCTCCAGGACCGGC +
Preference number: 4 (lower is better)
Translates to: GSGLMVTMRVSYIVPSPARLSWG*GRSRTG
Trigger: GCCGGTCCTGGAGCGACCCCACCCCCATGAAAGCCG...GGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCTGAGCAACGTCTGAGGTGCCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACACTTCCTTCTCCACTTTaGCAAAGGTGGCCACCTTGT +
Preference number: 4 (lower is better)
Translates to: PEQRLRCPEVAPGETGATLPSPL*QRWPPC
Trigger: ACAAGGTGGCCACCTTTGCCAAAGTGGAGAAGGAAG...TGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCTGAGCAACGTCTGAGGTGCCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACAGATGACGTTCGGCTCTaGGTTCACTTTGCTCATCAG +
Preference number: 4 (lower is better)
Translates to: PEQRLRCPEVAPGETGATDDVRL*VHFAHQ
Trigger: CTGATGAGCAAAGTGAACCCAGAGCCGAACGTCATC...TGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCGGGCTGCTGGGCTGCTaGGCCGGGGTGCCTACACTG +
Preference number: 4 (lower is better)
Translates to: RIRFNGHYEGIVHRSKPGGLLGC*AGVPTL
Trigger: CAGTGTAGGCACCCCGGCCCAGCAGCCCAGCAGCCC...GCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCACACATGTGGGCTGCTaGGCTGCTGGGCCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPTHVGC*AAGPGC
Trigger: GCACCCCGGCCCAGCAGCCCAGCAGCCCACATGTGT...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp AGGAGTGTAAGTGAAAGCACAGACAGTCGGAGACTCGGCCAGTGTAGACAGACCGCATCAGCCAGCAGGTaGTCTGCGCCGTTGCGGTTC +
Preference number: 4 (lower is better)
Translates to: RSVSESTDSRRLGQCRQTASASR*SAPLRF
Trigger: GAACCGCAACGGCGCAGATCACCTGCTGGCTGATGC...GGTCTGTCTACACTGGCCGAGTCTCCGACTGTCTGTGCTTTCACTTACACTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp CGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGGTGTACACTCGAGGCTaGGGGCCCTCGCCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: RWRIRFNGHYEGIVHRSKVYTRG*GPSPAG
Trigger: GCCCGCAGGCGAGGGCCCTCAGCCTCGAGTGTACAC...CTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp AGGAGTGTAAGTGAAAGCACAGACAGTCGGAGACTCGGCCAGTGTAGACAGACCCGTAGAGGATGGGGATaGTGGAGGGGTCATCCCGGC +
Preference number: 4 (lower is better)
Translates to: RSVSESTDSRRLGQCRQTRRGWG*WRGHPG
Trigger: GCCGGGATGACCCCTCCATCATCCCCATCCTCTACG...GGTCTGTCTACACTGGCCGAGTCTCCGACTGTCTGTGCTTTCACTTACACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCACAGGGGGAACCTaGGCAACGTCTGAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: GSGLMVTMRVSYIVPSPAPTGGT*ATSEVP
Trigger: GGGCACCTCAGACGTTGCTCAGGTTCCCCCTGTGGG...GGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp CGCGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCATCAGTGCCTGGCCGCTaGGCATCCACGGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: RGGGSGLMVTMRVSYIVPSVPGR*ASTGHR
Trigger: CCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGA...TGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCTGAGGGCCCTCGCCTaGGGGCTTCCTAATGCTGGG +
Preference number: 4 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPLRALA*GLPNAG
Trigger: CCCAGCATTAGGAAGCCCGCAGGCGAGGGCCCTCAG...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp TGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAGTGGAGCCCTGGCGGCTaGCCGCCCAGCTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: CRNCTYFYEPHGGMPTAEWSPGG*PPSSGR
Trigger: CCTGCCAGAGCTGGGCGGGCAGCCGCCAGGGCTCCA...CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CCCCACCCAGAGCCTCCTCTGAAGGAGGGGACGCTGCGCCCTTCCTTCCTGCTGTTGCATAGTTGTGGTTaGTGTCTGGAAGCTGAAAAG +
Preference number: 4 (lower is better)
Translates to: PHPEPPLKEGTLRPSFLLLHSCG*CLEAEK
Trigger: CTTTTCAGCTTCCAGACAGCAACCACAACTATGCAA...CAGCAGGAAGGAAGGGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp AATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCGCCCCAGCGATGTCCTCGAAGGTTaGGTGCTCATGGTCGTAGAG +
Preference number: 4 (lower is better)
Translates to: NGHYEGIVHRSKPGPRPSDVLEG*VLMVVE
Trigger: CTCTACGACCATGAGCACGCAACCTTCGAGGACATC...GCTGGGGCGGGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp AATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCGCCCCAGCTACGTCTCGATCATCTaGTTCCCTTGGGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: NGHYEGIVHRSKPGPRPSYVSII*FPWAES
Trigger: GCTCTCAGCCCAAGGGAAGCAGATGATCGAGACGTA...GCTGGGGCGGGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp AGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCTGGGCGGAGGCCTCTaGCCCTCACAGGACGTCGTC +
Preference number: 4 (lower is better)
Translates to: RIRFNGHYEGIVHRSKPGLGGGL*PSQDVV
Trigger: GACGACGTCCTGTGAGGGGCAGAGGCCTCCGCCCAG...GCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CGCGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCACTCTGCGGCCACGGGTaGAGCGAGGACCGGAACCCA +
Preference number: 4 (lower is better)
Translates to: RGGGSGLMVTMRVSYIVPLCGHG*SEDRNP
Trigger: TGGGTTCCGGTCCTCGCTGCACCCGTGGCCGCAGAG...TGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGAGGGACTGCAGCCTCTaGGGCCACGGGTGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: GGSGLMVTMRVSYIVPSPRDCSL*GHGCSE
Trigger: CTCGCTGCACCCGTGGCCGCAGAGGCTGCAGTCCCT...CGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGTCCTGCTGCCCAGACTaGCCCTACCGGGTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: RWRIRFNGHYEGIVHRSKSCCPD*PYRVRR
Trigger: GCGCCGGACCCGGTAGGGGCAGTCTGGGCAGCAGGA...CTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCTACAGTCCACCAGCTaGGCGGCCGGGTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RWRIRFNGHYEGIVHRSKLQSTS*AAGSRG
Trigger: GCCCCTGGACCCGGCCGCGCAGCTGGTGGACTGTAG...CTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCCCGCCACCGAGGACATaGCCTCGCTCCTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: WRIRFNGHYEGIVHRSKPPPPRT*PRSSAP
Trigger: GGGCGCTGAGGAGCGAGGCCATGTCCTCGGTGGCGG...GGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCAGGCGGCGCTTGTTCTaGGGGGCCGGCTGCATCTCG +
Preference number: 4 (lower is better)
Translates to: RIRFNGHYEGIVHRSKPGRRRLF*GAGCIS
Trigger: CGAGATGCAGCCGGCCCCCCAGAACAAGCGCCGCCT...GCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGAGGCGGCGCTTGTTCTaGGGGGCCGGCTGCATCTCG +
Preference number: 4 (lower is better)
Translates to: GGSGLMVTMRVSYIVPSPRRRLF*GAGCIS
Trigger: CGAGATGCAGCCGGCCCCCCAGAACAAGCGCCGCCT...CGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCTCGTAGCAGCCGTTaGAGACGAGGGACAGGCGGC +
Preference number: 4 (lower is better)
Translates to: GSGLMVTMRVSYIVPSPAPRSSR*RRGTGG
Trigger: GCCGCCTGTCCCTCGTCTCCAACGGCTGCTACGAGG...GGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCCTCGTAGCAGCCGTTaGAGACGAGGGACAGGCGGC +
Preference number: 4 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPPRSSR*RRGTGG
Trigger: GCCGCCTGTCCCTCGTCTCCAACGGCTGCTACGAGG...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCTGCCCGCCCAGCTCTaGCAGGGCCTGCTGACGTCC +
Preference number: 4 (lower is better)
Translates to: GGGSGLMVTMRVSYIVPSLPAQL*QGLLTS
Trigger: GGACGTCAGCAGGCCCTGCCAGAGCTGGGCGGGCAG...GCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCTGCCCGCCCAGCTCTaGCAGGGCCTGCTGACGTCC +
Preference number: 4 (lower is better)
Translates to: RWRIRFNGHYEGIVHRSKLPAQL*QGLLTS
Trigger: GGACGTCAGCAGGCCCTGCCAGAGCTGGGCGGGCAG...CTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCACTCCTTGGAGCCCTaGCGGCTGCCCGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GGGSGLMVTMRVSYIVPSHSLEP*RLPAQL
Trigger: GAGCTGGGCGGGCAGCCGCCAGGGCTCCAAGGAGTG...GCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCATCCGGGGCACTCCTTaGAGCCCTGGCGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: WRIRFNGHYEGIVHRSKPIRGTP*SPGGCP
Trigger: CGGGCAGCCGCCAGGGCTCCAAGGAGTGCCCCGGAT...GGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGGCCAGGAGCCAGCTaGGCACATCCGGGGCACTCC +
Preference number: 4 (lower is better)
Translates to: WRIRFNGHYEGIVHRSKPGPGAS*AHPGHS
Trigger: GGAGTGCCCCGGATGTGCCCAGCTGGCTCCTGGCCC...GGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCAAAGGCCCGAGGGGTaGGGCCAGGAGCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GGGSGLMVTMRVSYIVPSQRPEG*GQEPAG
Trigger: CCCAGCTGGCTCCTGGCCCCACCCCTCGGGCCTTTG...GCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AGGAGTGTAAGTGAAAGCACAGACAGTCGGAGACTCGGCCAGTGTAGACAGACCTCAGGCAGAGGTGGCTaGTCCAGCCCAAAGGCCCGA +
Preference number: 4 (lower is better)
Translates to: RSVSESTDSRRLGQCRQTSGRGG*SSPKAR
Trigger: TCGGGCCTTTGGGCTGGACCAGCCACCTCTGCCTGA...GGTCTGTCTACACTGGCCGAGTCTCCGACTGTCTGTGCTTTCACTTACACTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCCCTGGAAAGCACTGAGAGGACAGACCCACGCGGCGGCCGCGGTGGAGGATCAGTTGTGGTTGCTGTCTaGAAGCTGAAAAGATTTTCC +
Preference number: 4 (lower is better)
Translates to: PLESTERTDPRGGRGGGSVVVAV*KLKRFS
Trigger: GGAAAATCTTTTCAGCTTCCAGACAGCAACCACAAC...TGATCCTCCACCGCGGCCGCCGCGTGGGTCTGTCCTCTCAGTGCTTTCCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CGCGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCACGGCTTTCATGGGGGTaGGGTCGCTCCAGGACCGGC +
Preference number: 4 (lower is better)
Translates to: RGGGSGLMVTMRVSYIVPRLSWG*GRSRTG
Trigger: GCCGGTCCTGGAGCGACCCCACCCCCATGAAAGCCG...TGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371472.6
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCTGAGCAACGTCTGAGGTGCCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACATGTCCAGGACCTCCCTaGCAGAAAATCAGCATTTTC +
Preference number: 4 (lower is better)
Translates to: PEQRLRCPEVAPGETGATCPGPP*QKISIF
Trigger: GAAAATGCTGATTTTCTGCCAGGGAGGTCCTGGACA...TGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCTGGCCTGATGGTGACTaGGCGGAGGCCTCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPWPDGD*AEASAP
Trigger: AGGGGCAGAGGCCTCCGCCCAGTCACCATCAGGCCA...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCTGGCAGGTCAGTGCCTaGCCGCTGAGCATCCACGGG +
Preference number: 4 (lower is better)
Translates to: GSGLMVTMRVSYIVPSPAWQVSA*PLSIHG
Trigger: CCCGTGGATGCTCAGCGGCCAGGCACTGACCTGCCA...GGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CGCGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCACCTCCAGGCGAGGCATaGCAGGTCAGTGCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: RGGGSGLMVTMRVSYIVPPPGEA*QVSAWP
Trigger: CGGCCAGGCACTGACCTGCCATGCCTCGCCTGGAGG...TGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGGCTGCTGGGCTGCTaGGCCGGGGTGCCTACACTG +
Preference number: 4 (lower is better)
Translates to: WRIRFNGHYEGIVHRSKPGLLGC*AGVPTL
Trigger: CAGTGTAGGCACCCCGGCCCAGCAGCCCAGCAGCCC...GGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCACACATGTGGGCTGCTaGGCTGCTGGGCCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: RIRFNGHYEGIVHRSKPGTHVGC*AAGPGC
Trigger: GCACCCCGGCCCAGCAGCCCAGCAGCCCACATGTGT...GCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCAGCCCTCCCTCAGCTaGGAACACAGCCAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPQPSLS*EHSQVP
Trigger: GGGCACCTGGCTGTGTTCCCAGCTGAGGGAGGGCTG...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCGTAGAGGATGGGGATaGTGGAGGGGTCATCCCGGC +
Preference number: 4 (lower is better)
Translates to: GSGLMVTMRVSYIVPSPARRGWG*WRGHPG
Trigger: GCCGGGATGACCCCTCCATCATCCCCATCCTCTACG...GGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCTCAGTGCCTGGCCGCTaGGCATCCACGGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: GGGSGLMVTMRVSYIVPSSVPGR*ASTGHR
Trigger: CCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGA...GCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp CGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGTCAGTGCCTGGCCGCTaGGCATCCACGGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: RWRIRFNGHYEGIVHRSKSVPGR*ASTGHR
Trigger: CCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGA...CTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp AGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCACCCTGGTGCTGGTaGTCGATACGGCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: RIRFNGHYEGIVHRSKPGPPWCW*SIRQGG
Trigger: CCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGG...GCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGCCACCCTGGTGCTGGTaGTCGATACGGCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GGSGLMVTMRVSYIVPSPPPWCW*SIRQGG
Trigger: CCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGG...CGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGGGTCCGGCGCCGGCTaGGGTCTAAGTAAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GGSGLMVTMRVSYIVPSPGSGAG*GLSKQG
Trigger: TCCCTGCTTACTTAGACCTCAGCCGGCGCCGGACCC...CGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCTGGAAAGCACTaGGAGGACAGACCCACGCGG +
Preference number: 4 (lower is better)
Translates to: GGSGLMVTMRVSYIVPSPAPGKH*EDRPTR
Trigger: CCGCGTGGGTCTGTCCTCTCAGTGCTTTCCAGGGGC...CGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp CGCGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAAGGCCCTGCAGCAGTaGCCTCACAGGAGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: RGGGSGLMVTMRVSYIVPKALQQ*PHRSGP
Trigger: GGGCCCACTCCTGTGAGGTCACTGCTGCAGGGCCTT...TGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp TTGTTTCGGGGGTGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGTGGAGCCCTGGCGGCTaGCCGCCCAGCTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LFRGCRNCTYFYEPHGGMWSPGG*PPSSGR
Trigger: CCTGCCAGAGCTGGGCGGGCAGCCGCCAGGGCTCCA...CATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACACCCCCGAAACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp AGGAGTGTAAGTGAAAGCACAGACAGTCGGAGACTCGGCCAGTGTAGACAGACCTCCTCTCCAGCTTCTTaGGGCGACCGGAGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: RSVSESTDSRRLGQCRQTSSPAS*GDRRSQ
Trigger: CTGAGACCTCCGGTCGCCGCAAGAAGCTGGAGAGGA...GGTCTGTCTACACTGGCCGAGTCTCCGACTGTCTGTGCTTTCACTTACACTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGCCATGCGCAGGTGTTTaGGGAAGTTCCTCTGGATTA +
Preference number: 4 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLPCAGV*GSSSGL
Trigger: TAATCCAGAGGAACTTCCGCAAACACCTGCGCATGG...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371475.9
CDS-3UTR GCA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCCTTCACCCTCCGGCTaGCGACCATGCGCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPPSPSG*RPCAGV
Trigger: AACACCTGCGCATGGTCGGCAGCCGGAGGGTGAAGG...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp AGGAGTGTAAGTGAAAGCACAGACAGTCGGAGACTCGGCCAGTGTAGACAGACCTCCAGCAGCTTCGAGTaGTGGCGGCTCTTCCACAGG +
Preference number: 4 (lower is better)
Translates to: RSVSESTDSRRLGQCRQTSSSFE*WRLFHR
Trigger: CCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCTGGA...GGTCTGTCTACACTGGCCGAGTCTCCGACTGTCTGTGCTTTCACTTACACTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp AGGAGTGTAAGTGAAAGCACAGACAGTCGGAGACTCGGCCAGTGTAGACAGACCAACCCCATGGAGGGATaGCCACAGCTGAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RSVSESTDSRRLGQCRQTNPMEG*PQLSLQ
Trigger: CTGGAGGCTCAGCTGTGGGCATCCCTCCATGGGGTT...GGTCTGTCTACACTGGCCGAGTCTCCGACTGTCTGTGCTTTCACTTACACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp TGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAGTCCTGCTGCCCAGACTaGCCCTACCGGGTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: CRNCTYFYEPHGGMPTAESCCPD*PYRVRR
Trigger: GCGCCGGACCCGGTAGGGGCAGTCTGGGCAGCAGGA...CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CGCGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAAGCCTGCCAGGCTGTaGCAGGCTGCGCACCAGTGG +
Preference number: 4 (lower is better)
Translates to: RGGGSGLMVTMRVSYIVPKPARL*QAAHQW
Trigger: CCACTGGTGCGCAGCCTGGCACAGCCTGGCAGGCTT...TGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CGCGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAGGGCTGCTCGCACTTTaGCCGCCACCGAGGACATGG +
Preference number: 4 (lower is better)
Translates to: RGGGSGLMVTMRVSYIVPGLLAL*PPPRTW
Trigger: CCATGTCCTCGGTGGCGGCCAAAGTGCGAGCAGCCC...TGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGGGCTGCTCGCACTTTaGCCGCCACCGAGGACATGG +
Preference number: 4 (lower is better)
Translates to: GGSGLMVTMRVSYIVPSPGLLAL*PPPRTW
Trigger: CCATGTCCTCGGTGGCGGCCAAAGTGCGAGCAGCCC...CGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCTCGTAGCAGCCGTTaGAGACGAGGGACAGGCGGC +
Preference number: 4 (lower is better)
Translates to: RIRFNGHYEGIVHRSKPGPRSSR*RRGTGG
Trigger: GCCGCCTGTCCCTCGTCTCCAACGGCTGCTACGAGG...GCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TTGTTTCGGGGGTGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCTCCGCCTCAGGGCTaGGCAGCAGGGCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: LFRGCRNCTYFYEPHGGMPPPQG*AAGQAP
Trigger: GGGAGCCTGCCCTGCTGCCCAGCCCTGAGGCGGAGG...CATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACACCCCCGAAACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TTGTTTCGGGGGTGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGGGCTGCCACCAGGGCTaGCGCGCAGGGGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LFRGCRNCTYFYEPHGGMGCHQG*RAGAGC
Trigger: ACAGCCAGCCCCTGCGCGCCAGCCCTGGTGGCAGCC...CATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACACCCCCGAAACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAGCACTCCTTGGAGCCCTaGCGGCTGCCCGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: CRNCTYFYEPHGGMPTAEHSLEP*RLPAQL
Trigger: GAGCTGGGCGGGCAGCCGCCAGGGCTCCAAGGAGTG...CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCGGCTTTCATGGGGGTaGGGTCGCTCCAGGACCGGC +
Preference number: 4 (lower is better)
Translates to: RWRIRFNGHYEGIVHRSKRLSWG*GRSRTG
Trigger: GCCGGTCCTGGAGCGACCCCACCCCCATGAAAGCCG...CTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371472.6
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCGCCCCAGCAGGGTCCTGAGGTTCTaGAACAGCTTCTCTCCATTG +
Preference number: 4 (lower is better)
Translates to: NGHYEGIVHRSKPGPRPSRVLRF*NSFSPL
Trigger: CAATGGAGAGAAGCTGTTCCAGAACCTCAGGACCCT...GCTGGGGCGGGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCTGGCCTGATGGTGACTaGGCGGAGGCCTCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: RIRFNGHYEGIVHRSKPGWPDGD*AEASAP
Trigger: AGGGGCAGAGGCCTCCGCCCAGTCACCATCAGGCCA...GCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCGGTGCAGAGGGAGTaGCCTGATGGTGACTGGGCG +
Preference number: 4 (lower is better)
Translates to: RIRFNGHYEGIVHRSKPGPVQRE*PDGDWA
Trigger: CGCCCAGTCACCATCAGGCCACTCCCTCTGCACCGG...GCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCTGGCAGGTCAGTGCCTaGCCGCTGAGCATCCACGGG +
Preference number: 4 (lower is better)
Translates to: RIRFNGHYEGIVHRSKPGWQVSA*PLSIHG
Trigger: CCCGTGGATGCTCAGCGGCCAGGCACTGACCTGCCA...GCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AGGAGTGTAAGTGAAAGCACAGACAGTCGGAGACTCGGCCAGTGTAGACAGACCGCCGTGGACAAAAGCTaGGAGCTCCTGTGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: RSVSESTDSRRLGQCRQTAVDKS*ELLCPV
Trigger: GACTGGGCACAGGAGCTCCCAGCTTTTGTCCACGGC...GGTCTGTCTACACTGGCCGAGTCTCCGACTGTCTGTGCTTTCACTTACACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCAGCCCTCCCTCAGCTaGGAACACAGCCAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: RIRFNGHYEGIVHRSKPGQPSLS*EHSQVP
Trigger: GGGCACCTGGCTGTGTTCCCAGCTGAGGGAGGGCTG...GCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCGTCCCCTCCTGTGCTaGTCCCCCTGGCTATGCCCT +
Preference number: 4 (lower is better)
Translates to: RIRFNGHYEGIVHRSKPGRPLLC*SPWLCP
Trigger: AGGGCATAGCCAGGGGGACCAGCACAGGAGGGGACG...GCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp CGCGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAGCATCAGCCAGCAGGTaGTCTGCGCCGTTGCGGTTC +
Preference number: 4 (lower is better)
Translates to: RGGGSGLMVTMRVSYIVPASASR*SAPLRF
Trigger: GAACCGCAACGGCGCAGATCACCTGCTGGCTGATGC...TGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp AGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCGCATCAGCCAGCAGGTaGTCTGCGCCGTTGCGGTTC +
Preference number: 4 (lower is better)
Translates to: RIRFNGHYEGIVHRSKPGASASR*SAPLRF
Trigger: GAACCGCAACGGCGCAGATCACCTGCTGGCTGATGC...GCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCAATGCTGGGCTCCTCTaGGAGGCTGCCCTCGTAGCA +
Preference number: 4 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPNAGLL*EAALVA
Trigger: TGCTACGAGGGCAGCCTCTCAGAGGAGCCCAGCATT...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp TGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCCCCACAGGGGGAACCTaGGCAACGTCTGAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: WRIRFNGHYEGIVHRSKPPTGGT*ATSEVP
Trigger: GGGCACCTCAGACGTTGCTCAGGTTCCCCCTGTGGG...GGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGTTGCACTTATTTCTATaGACCCCATGGAGGGATGCC +
Preference number: 4 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLLHLFL*TPWRDA
Trigger: GGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAA...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp TGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAGACCCAGAGCCTCCTCTaGAGGAGGGGACGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: CRNCTYFYEPHGGMPTAETQSLL*RRGRCA
Trigger: GGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGT...CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCTCCGGCTGCCGACCATaGGCAGGTGTTTGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPSGCRP*AGVCGS
Trigger: ACTTCCGCAAACACCTGCGCATGGTCGGCAGCCGGA...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGCCTTCACCCTCCGGCTaGCGACCATGCGCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: GGSGLMVTMRVSYIVPSPPSPSG*RPCAGV
Trigger: AACACCTGCGCATGGTCGGCAGCCGGAGGGTGAAGG...CGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCGTGCAGTGGGAGCTCTaGAGGTCACTGCTGTCTCGG +
Preference number: 4 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPVQWEL*RSLLSR
Trigger: CCGAGACAGCAGTGACCTGCAGAGCTCCCACTGCAC...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGAGGCCTCGTCCAGCGTaGAGTGGGAGCTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: GGSGLMVTMRVSYIVPSPRPRPA*SGSSAG
Trigger: ACCTGCAGAGCTCCCACTGCACGCTGGACGAGGCCT...CGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCTCCAGCAGCTTCGAGTaGTGGCGGCTCTTCCACAGG +
Preference number: 4 (lower is better)
Translates to: GSGLMVTMRVSYIVPSPASSSFE*WRLFHR
Trigger: CCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCTGGA...GGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCTCCAGCAGCTTCGAGTaGTGGCGGCTCTTCCACAGG +
Preference number: 4 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPSSSFE*WRLFHR
Trigger: CCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCTGGA...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCGAGCAACGTCTGAGGTaGCCTGAAGTGGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GSGLMVTMRVSYIVPSPAEQRLR*PEVAPG
Trigger: GCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTC...GGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp TTGTTTCGGGGGTGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGTCCTGCTGCCCAGACTaGCCCTACCGGGTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: LFRGCRNCTYFYEPHGGMSCCPD*PYRVRR
Trigger: GCGCCGGACCCGGTAGGGGCAGTCTGGGCAGCAGGA...CATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACACCCCCGAAACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CCCTCGCCCCAGCTATATACACGACAGCCCATCCTGCTGGCCGTGGACAAAAGCAACACCGAGATGGCTTaGATAGTTGTGGTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: PSPQLYTRQPILLAVDKSNTEMA*IVVVAV
Trigger: GACAGCAACCACAACTATGCAAGCCATCTCGGTGTT...GCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTGTATATAGCTGGGGCGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371473.7
ENST00000371475.9
CDS-3UTR GCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGTTGCGGAAGTTCGCTTaGATAGTTGTGGTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLLRKFA*IVVVAV
Trigger: GACAGCAACCACAACTATGCAAGCGAACTTCCGCAA...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371474.7
CDS-3UTR CCA 90 bp TGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCCCTCGTAGCAGCCGTTaGAGACGAGGGACAGGCGGC +
Preference number: 4 (lower is better)
Translates to: WRIRFNGHYEGIVHRSKPPRSSR*RRGTGG
Trigger: GCCGCCTGTCCCTCGTCTCCAACGGCTGCTACGAGG...GGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAGCCACCGCCAGCTCAATaGCCTCCGCCTCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: CRNCTYFYEPHGGMPTAEPPPAQ*PPPQGW
Trigger: CCAGCCCTGAGGCGGAGGCCATTGAGCTGGCGGTGG...CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TTGTTTCGGGGGTGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCAAAGGCCCGAGGGGTaGGGCCAGGAGCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LFRGCRNCTYFYEPHGGMQRPEG*GQEPAG
Trigger: CCCAGCTGGCTCCTGGCCCCACCCCTCGGGCCTTTG...CATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACACCCCCGAAACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCGCTCAGCGAACGTCTaGGCCTTCACCCTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: GGGSGLMVTMRVSYIVPSRSANV*AFTLRL
Trigger: CAGCCGGAGGGTGAAGGCCCAGACGTTCGCTGAGCG...GCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371472.6
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCCGCTCAGCGAACGTCTaGGCCTTCACCCTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: WRIRFNGHYEGIVHRSKPRSANV*AFTLRL
Trigger: CAGCCGGAGGGTGAAGGCCCAGACGTTCGCTGAGCG...GGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371472.6
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGGCATTTTCCAGATCTTaGCTCCCTTGTGGTAGACGT +
Preference number: 4 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLAFSRS*LPCGRR
Trigger: ACGTCTACCACAAGGGAGCCAAGATCTGGAAAATGC...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CCCTCGCCCCAGCTATATACACGACAGCCCATCCTGCTGGCCGTGGACAAAAGCGCATTTTCCAGATCTTaGCTCCCTTGTGGTAGACGT +
Preference number: 4 (lower is better)
Translates to: PSPQLYTRQPILLAVDKSAFSRS*LPCGRR
Trigger: ACGTCTACCACAAGGGAGCCAAGATCTGGAAAATGC...GCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTGTATATAGCTGGGGCGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGTGTCCAGGACCTCCCTaGCAGAAAATCAGCATTTTC +
Preference number: 4 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLCPGPP*QKISIF
Trigger: GAAAATGCTGATTTTCTGCCAGGGAGGTCCTGGACA...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCAGCAGCTTCGAGTGCTaGCGGCTCTTCCACAGGCGA +
Preference number: 4 (lower is better)
Translates to: GSGLMVTMRVSYIVPSPASSFEC*RLFHRR
Trigger: TCGCCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCT...GGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCCCGGTGCAGAGGGAGTaGCCTGATGGTGACTGGGCG +
Preference number: 4 (lower is better)
Translates to: WRIRFNGHYEGIVHRSKPPVQRE*PDGDWA
Trigger: CGCCCAGTCACCATCAGGCCACTCCCTCTGCACCGG...GGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCACGCGGCGGCCGCGGTaGAGGATCAGGTTTAATGGT +
Preference number: 4 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPTRRPR*RIRFNG
Trigger: ACCATTAAACCTGATCCTCCACCGCGGCCGCCGCGT...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AGGAGTGTAAGTGAAAGCACAGACAGTCGGAGACTCGGCCAGTGTAGACAGACCGCACAGGAAGGCCCCTaGAAAGCACTGAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: RSVSESTDSRRLGQCRQTAQEGP*KALRGQ
Trigger: CTGTCCTCTCAGTGCTTTCCAGGGGCCTTCCTGTGC...GGTCTGTCTACACTGGCCGAGTCTCCGACTGTCTGTGCTTTCACTTACACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCTGTGCTGGTCCCCCTaGCTATGCCCTGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GGGSGLMVTMRVSYIVPSLCWSP*LCPVGW
Trigger: CCACCCCACAGGGCATAGCCAGGGGGACCAGCACAG...GCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp AGGAGTGTAAGTGAAAGCACAGACAGTCGGAGACTCGGCCAGTGTAGACAGACCTTGCGGTTCTCAGGGTaGCTCTGGGACAGGTACTCT +
Preference number: 4 (lower is better)
Translates to: RSVSESTDSRRLGQCRQTLRFSG*LWDRYS
Trigger: AGAGTACCTGTCCCAGAGTCACCCTGAGAACCGCAA...GGTCTGTCTACACTGGCCGAGTCTCCGACTGTCTGTGCTTTCACTTACACTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGAATGCTGGGCTCCTCTaGGAGGCTGCCCTCGTAGCA +
Preference number: 4 (lower is better)
Translates to: GGSGLMVTMRVSYIVPSPNAGLL*EAALVA
Trigger: TGCTACGAGGGCAGCCTCTCAGAGGAGCCCAGCATT...CGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCGTAGAGGATGGGGATaGTGGAGGGGTCATCCCGGC +
Preference number: 4 (lower is better)
Translates to: GGGSGLMVTMRVSYIVPSRRGWG*WRGHPG
Trigger: GCCGGGATGACCCCTCCATCATCCCCATCCTCTACG...GCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp TGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCCGTAGAGGATGGGGATaGTGGAGGGGTCATCCCGGC +
Preference number: 4 (lower is better)
Translates to: WRIRFNGHYEGIVHRSKPRRGWG*WRGHPG
Trigger: GCCGGGATGACCCCTCCATCATCCCCATCCTCTACG...GGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp TGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAGGGGCAGGGAGGGTCCTaGACACATGTGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CRNCTYFYEPHGGMPTAEGQGGS*THVGCW
Trigger: CCAGCAGCCCACATGTGTTCAGGACCCTCCCTGCCC...CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCGGTGATCTGCGCCGTTaGGGTTCTCAGGGTGACTCT +
Preference number: 4 (lower is better)
Translates to: GSGLMVTMRVSYIVPSPAGDLRR*GSQGDS
Trigger: AGAGTCACCCTGAGAACCGCAACGGCGCAGATCACC...GGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCGCTCCTCTGAGAGGCTaGCCTCGTAGCAGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: GGGSGLMVTMRVSYIVPSAPLRG*PRSSRW
Trigger: CCAACGGCTGCTACGAGGGCAGCCTCTCAGAGGAGC...GCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp TGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGCTCCTCTGAGAGGCTaGCCTCGTAGCAGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: WRIRFNGHYEGIVHRSKPAPLRG*PRSSRW
Trigger: CCAACGGCTGCTACGAGGGCAGCCTCTCAGAGGAGC...GGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGTCCTCTCCAGCTTCTTaGGGCGACCGGAGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: GGSGLMVTMRVSYIVPSPSSPAS*GDRRSQ
Trigger: CTGAGACCTCCGGTCGCCGCAAGAAGCTGGAGAGGA...CGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GGCCTAGCTCCAACTCTGTCCAGGCAGGAAGGCCCTGCAGCAGTGACCTCACAGTTGCATAGTTGTGGTTaGTGTCTGGAAGCTGAAAAG +
Preference number: 4 (lower is better)
Translates to: GLAPTLSRQEGPAAVTSQLHSCG*CLEAEK
Trigger: CTTTTCAGCTTCCAGACAGCAACCACAACTATGCAA...CTGTGAGGTCACTGCTGCAGGGCCTTCCTGCCTGGACAGAGTTGGAGCTAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CGCGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAGTGCAGTGGGAGCTCTaGAGGTCACTGCTGTCTCGG +
Preference number: 4 (lower is better)
Translates to: RGGGSGLMVTMRVSYIVPVQWEL*RSLLSR
Trigger: CCGAGACAGCAGTGACCTGCAGAGCTCCCACTGCAC...TGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371472.6
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCGCTCTGGGTTCACTTTaGTCATCAGGCGGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: GSGLMVTMRVSYIVPSPAALGSL*SSGGSA
Trigger: GGCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGC...GGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGAGCAACGTCTGAGGTaGCCTGAAGTGGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GGSGLMVTMRVSYIVPSPEQRLR*PEVAPG
Trigger: GCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTC...CGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCACGACAGCCCATCCTaGTGGCCGTGGACAAAAGCT +
Preference number: 4 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPHDSPS*WPWTKA
Trigger: AGCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTG...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGTGGTCCCCCTGGCTATaGCCTGTGGGGTGGTCTAGT +
Preference number: 4 (lower is better)
Translates to: GGSGLMVTMRVSYIVPSPWSPWL*PVGWSS
Trigger: ACTAGACCACCCCACAGGGCATAGCCAGGGGGACCA...CGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp TGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAGCTCCGTCCCCTCCTGTaGTGGTCCCCCTGGCTATGC +
Preference number: 4 (lower is better)
Translates to: CRNCTYFYEPHGGMPTAELRPLL*WSPWLC
Trigger: GCATAGCCAGGGGGACCAGCACAGGAGGGGACGGAG...CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAGGGGCTGCTCGCACTTTaGCCGCCACCGAGGACATGG +
Preference number: 4 (lower is better)
Translates to: CRNCTYFYEPHGGMPTAEGLLAL*PPPRTW
Trigger: CCATGTCCTCGGTGGCGGCCAAAGTGCGAGCAGCCC...CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCTCAGGCAGAGGTGGCTaGTCCAGCCCAAAGGCCCGA +
Preference number: 4 (lower is better)
Translates to: GGGSGLMVTMRVSYIVPSSGRGG*SSPKAR
Trigger: TCGGGCCTTTGGGCTGGACCAGCCACCTCTGCCTGA...GCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGGGTCTCAGGCAGAGGTaGCTGGTCCAGCCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: RWRIRFNGHYEGIVHRSKGLRQR*LVQPKG
Trigger: GCCTTTGGGCTGGACCAGCCACCTCTGCCTGAGACC...CTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCAAGTGTCGGCTTTCATaGGGGTGGGGTCGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RIRFNGHYEGIVHRSKPGKCRLS*GWGRSR
Trigger: CCTGGAGCGACCCCACCCCCATGAAAGCCGACACTT...GCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AGGAGTGTAAGTGAAAGCACAGACAGTCGGAGACTCGGCCAGTGTAGACAGACCATCATCTGCTTCCCTTaGGCTGAGAGCTCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: RSVSESTDSRRLGQCRQTIICFP*AESSRG
Trigger: ACCCCTGGAGCTCTCAGCCCAAGGGAAGCAGATGAT...GGTCTGTCTACACTGGCCGAGTCTCCGACTGTCTGTGCTTTCACTTACACTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAGCCGGTGCAGAGGGAGTaGCCTGATGGTGACTGGGCG +
Preference number: 4 (lower is better)
Translates to: CRNCTYFYEPHGGMPTAEPVQRE*PDGDWA
Trigger: CGCCCAGTCACCATCAGGCCACTCCCTCTGCACCGG...CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGCCATCCTGCTGGCCGTaGACAAAAGCTGGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: GGSGLMVTMRVSYIVPSPPSCWP*TKAGSS
Trigger: GGAGCTCCCAGCTTTTGTCCACGGCCAGCAGGATGG...CGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCATCCTGCTGGCCGTaGACAAAAGCTGGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: RIRFNGHYEGIVHRSKPGPSCWP*TKAGSS
Trigger: GGAGCTCCCAGCTTTTGTCCACGGCCAGCAGGATGG...GCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGACAGCCCATCCTGCTaGCCGTGGACAAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GGSGLMVTMRVSYIVPSPDSPSC*PWTKAG
Trigger: CCCAGCTTTTGTCCACGGCCAGCAGGATGGGCTGTC...CGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGTGACCTCACAGGAGTaGGCCCAGAAGCTGGGCACA +
Preference number: 4 (lower is better)
Translates to: GGSGLMVTMRVSYIVPSPVTSQE*AQKLGT
Trigger: TGTGCCCAGCTTCTGGGCCCACTCCTGTGAGGTCAC...CGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCTATGCCCTGTGGGGTaGTCTAGTGGCCTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GSGLMVTMRVSYIVPSPALCPVG*SSGLAP
Trigger: TGGAGCTAGGCCACTAGACCACCCCACAGGGCATAG...GGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAGCGTCCCCTCCTGTGCTaGTCCCCCTGGCTATGCCCT +
Preference number: 4 (lower is better)
Translates to: CRNCTYFYEPHGGMPTAERPLLC*SPWLCP
Trigger: AGGGCATAGCCAGGGGGACCAGCACAGGAGGGGACG...CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAGATACAGCCCTCTCCCTaGTGCCCTCAGGCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: CRNCTYFYEPHGGMPTAEIQPSP*CPQAAG
Trigger: CCCTGCCGCCTGAGGGCACCAGGGAGAGGGCTGTAT...CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AGGAGTGTAAGTGAAAGCACAGACAGTCGGAGACTCGGCCAGTGTAGACAGACCACTGCACACACAGTGTaGCGTGAGGGACATACAGCC +
Preference number: 4 (lower is better)
Translates to: RSVSESTDSRRLGQCRQTTAHTV*REGHTA
Trigger: GGCTGTATGTCCCTCACGCCACACTGTGTGTGCAGT...GGTCTGTCTACACTGGCCGAGTCTCCGACTGTCTGTGCTTTCACTTACACTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp TGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAGGCATCAGCCAGCAGGTaGTCTGCGCCGTTGCGGTTC +
Preference number: 4 (lower is better)
Translates to: CRNCTYFYEPHGGMPTAEASASR*SAPLRF
Trigger: GAACCGCAACGGCGCAGATCACCTGCTGGCTGATGC...CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp CGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGAATGCTGGGCTCCTCTaGGAGGCTGCCCTCGTAGCA +
Preference number: 4 (lower is better)
Translates to: RWRIRFNGHYEGIVHRSKNAGLL*EAALVA
Trigger: TGCTACGAGGGCAGCCTCTCAGAGGAGCCCAGCATT...CTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCAGCCAGCAGGTGATCTaGGCCGTTGCGGTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: GGGSGLMVTMRVSYIVPSSQQVI*AVAVLR
Trigger: CCTGAGAACCGCAACGGCGCAGATCACCTGCTGGCT...GCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp TTGTTTCGGGGGTGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCTGAGGGCCCTCGCCTaGGGGCTTCCTAATGCTGGG +
Preference number: 4 (lower is better)
Translates to: LFRGCRNCTYFYEPHGGMLRALA*GLPNAG
Trigger: CCCAGCATTAGGAAGCCCGCAGGCGAGGGCCCTCAG...CATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACACCCCCGAAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGTCCTCTCCAGCTTCTTaGGGCGACCGGAGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: RWRIRFNGHYEGIVHRSKSSPAS*GDRRSQ
Trigger: CTGAGACCTCCGGTCGCCGCAAGAAGCTGGAGAGGA...CTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGTCCGGCTGCCGACCATaGGCAGGTGTTTGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: RWRIRFNGHYEGIVHRSKSGCRP*AGVCGS
Trigger: ACTTCCGCAAACACCTGCGCATGGTCGGCAGCCGGA...CTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp TGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAGCCTTCACCCTCCGGCTaGCGACCATGCGCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: CRNCTYFYEPHGGMPTAEPSPSG*RPCAGV
Trigger: AACACCTGCGCATGGTCGGCAGCCGGAGGGTGAAGG...CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CGCGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAGCTCTGGGTTCACTTTaGTCATCAGGCGGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: RGGGSGLMVTMRVSYIVPALGSL*SSGGSA
Trigger: GGCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGC...TGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp TGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCAACCCCATGGAGGGATaGCCACAGCTGAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: WRIRFNGHYEGIVHRSKPNPMEG*PQLSLQ
Trigger: CTGGAGGCTCAGCTGTGGGCATCCCTCCATGGGGTT...GGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp TGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAGAGCTGGGAGCTCCTGTaGCCAGTCAGGAGCCCCTAC +
Preference number: 4 (lower is better)
Translates to: CRNCTYFYEPHGGMPTAESWELL*PVRSPY
Trigger: GTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCT...CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCAGCTCTGCAGGTCACTaGTCTGGGCCTTCACCCTCC +
Preference number: 4 (lower is better)
Translates to: GGGSGLMVTMRVSYIVPSSSAGH*SGPSPS
Trigger: GGAGGGTGAAGGCCCAGAGCAGTGACCTGCAGAGCT...GCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371473.7
CDS-3UTR CCA 90 bp GGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGCAGGCTCCCCAGAGATaGTGTACACTCGAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GGSGLMVTMRVSYIVPSPQAPQR*CTLEAE
Trigger: CTCAGCCTCGAGTGTACACCATCTCTGGGGAGCCTG...CGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCGCCCCAGCGTTGTGGTTGCTGTCTaGAAGCTGAAAAGATTTTCC +
Preference number: 4 (lower is better)
Translates to: NGHYEGIVHRSKPGPRPSVVVAV*KLKRFS
Trigger: GGAAAATCTTTTCAGCTTCCAGACAGCAACCACAAC...GCTGGGGCGGGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGGTTGTGGTTGCTGTCTaGAAGCTGAAAAGATTTTCC +
Preference number: 4 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLVVVAV*KLKRFS
Trigger: GGAAAATCTTTTCAGCTTCCAGACAGCAACCACAAC...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGTCGTCCAGCGTGCAGTaGGAGCTCTGCAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: RWRIRFNGHYEGIVHRSKSSSVQ*ELCRSL
Trigger: CAGTGACCTGCAGAGCTCCCACTGCACGCTGGACGA...CTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCAGCAGCTTCGAGTGCTaGCGGCTCTTCCACAGGCGA +
Preference number: 4 (lower is better)
Translates to: WRIRFNGHYEGIVHRSKPSSFEC*RLFHRR
Trigger: TCGCCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCT...GGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TTGTTTCGGGGGTGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGTGGCCTGATGGTGACTaGGCGGAGGCCTCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: LFRGCRNCTYFYEPHGGMWPDGD*AEASAP
Trigger: AGGGGCAGAGGCCTCCGCCCAGTCACCATCAGGCCA...CATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACACCCCCGAAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGCCGTGGACAAAAGCTaGGAGCTCCTGTGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: WRIRFNGHYEGIVHRSKPAVDKS*ELLCPV
Trigger: GACTGGGCACAGGAGCTCCCAGCTTTTGTCCACGGC...GGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TTGTTTCGGGGGTGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGATACAGCCCTCTCCCTaGTGCCCTCAGGCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LFRGCRNCTYFYEPHGGMIQPSP*CPQAAG
Trigger: CCCTGCCGCCTGAGGGCACCAGGGAGAGGGCTGTAT...CATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACACCCCCGAAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCTGGCCACCTTGTTCTTaGGGAGATAGAGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: GSGLMVTMRVSYIVPSPAWPPCS*GDRGVQ
Trigger: CTGGACACCTCTATCTCCTCAAGAACAAGGTGGCCA...GGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp AGGAGTGTAAGTGAAAGCACAGACAGTCGGAGACTCGGCCAGTGTAGACAGACCAGCCGCTTCCAGAAGTaGATCATGTCCTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: RSVSESTDSRRLGQCRQTSRFQK*IMSSSF
Trigger: GAAGGAAGAGGACATGATTCACTTCTGGAAGCGGCT...GGTCTGTCTACACTGGCCGAGTCTCCGACTGTCTGTGCTTTCACTTACACTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp CGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGAACCTGAGCAACGTCTaGGGTGCCCTGAAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: RWRIRFNGHYEGIVHRSKNLSNV*GALKWL
Trigger: GAGCCACTTCAGGGCACCTCAGACGTTGCTCAGGTT...CTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGGGTGATCTGCGCCGTTaGGGTTCTCAGGGTGACTCT +
Preference number: 4 (lower is better)
Translates to: RWRIRFNGHYEGIVHRSKGDLRR*GSQGDS
Trigger: AGAGTCACCCTGAGAACCGCAACGGCGCAGATCACC...CTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp TTGTTTCGGGGGTGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGGCTCCTCTGAGAGGCTaGCCTCGTAGCAGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: LFRGCRNCTYFYEPHGGMAPLRG*PRSSRW
Trigger: CCAACGGCTGCTACGAGGGCAGCCTCTCAGAGGAGC...CATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACACCCCCGAAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCCCCTGAACACCGCTTaGATAGTTGTGGTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPPLNTA*IVVVAV
Trigger: GACAGCAACCACAACTATGCAAGCGGTGTTCAGGGG...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
52% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265663.12
ENST00000371472.6
CDS-3UTR GCA 90 bp AGGAGTGTAAGTGAAAGCACAGACAGTCGGAGACTCGGCCAGTGTAGACAGACCCCATGCGCAGGTGTTTaGGGAAGTTCCTCTGGATTA +
Preference number: 4 (lower is better)
Translates to: RSVSESTDSRRLGQCRQTPCAGV*GSSSGL
Trigger: TAATCCAGAGGAACTTCCGCAAACACCTGCGCATGG...GGTCTGTCTACACTGGCCGAGTCTCCGACTGTCTGTGCTTTCACTTACACTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371475.9
CDS-3UTR GCA 90 bp TGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAGTCCGGCTGCCGACCATaGGCAGGTGTTTGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: CRNCTYFYEPHGGMPTAESGCRP*AGVCGS
Trigger: ACTTCCGCAAACACCTGCGCATGGTCGGCAGCCGGA...CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCGATGTCCTCGAAGGTTaGGTGCTCATGGTCGTAGAG +
Preference number: 4 (lower is better)
Translates to: GSGLMVTMRVSYIVPSPADVLEG*VLMVVE
Trigger: CTCTACGACCATGAGCACGCAACCTTCGAGGACATC...GGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp TGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGCTCTGGGTTCACTTTaGTCATCAGGCGGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: WRIRFNGHYEGIVHRSKPALGSL*SSGGSA
Trigger: GGCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGC...GGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCTACGTCTCGATCATCTaGTTCCCTTGGGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPYVSII*FPWAES
Trigger: GCTCTCAGCCCAAGGGAAGCAGATGATCGAGACGTA...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp TGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAGTCCAGCAGCTTCGAGTaGTGGCGGCTCTTCCACAGG +
Preference number: 4 (lower is better)
Translates to: CRNCTYFYEPHGGMPTAESSSFE*WRLFHR
Trigger: CCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCTGGA...CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp TGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCCACGACAGCCCATCCTaGTGGCCGTGGACAAAAGCT +
Preference number: 4 (lower is better)
Translates to: WRIRFNGHYEGIVHRSKPHDSPS*WPWTKA
Trigger: AGCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTG...GGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCACGACAGCCCATCCTaGTGGCCGTGGACAAAAGCT +
Preference number: 4 (lower is better)
Translates to: GGGSGLMVTMRVSYIVPSHDSPS*WPWTKA
Trigger: AGCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTG...GCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCCAGGCTCCCCAGAGATaGTGTACACTCGAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: WRIRFNGHYEGIVHRSKPQAPQR*CTLEAE
Trigger: CTCAGCCTCGAGTGTACACCATCTCTGGGGAGCCTG...GGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCAGGCTCCCCAGAGATaGTGTACACTCGAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: RWRIRFNGHYEGIVHRSKQAPQR*CTLEAE
Trigger: CTCAGCCTCGAGTGTACACCATCTCTGGGGAGCCTG...CTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TTGTTTCGGGGGTGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGTCAGGCAGAGGTGGCTaGTCCAGCCCAAAGGCCCGA +
Preference number: 4 (lower is better)
Translates to: LFRGCRNCTYFYEPHGGMSGRGG*SSPKAR
Trigger: TCGGGCCTTTGGGCTGGACCAGCCACCTCTGCCTGA...CATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACACCCCCGAAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAGTCGTCCAGCGTGCAGTaGGAGCTCTGCAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: CRNCTYFYEPHGGMPTAESSSVQ*ELCRSL
Trigger: CAGTGACCTGCAGAGCTCCCACTGCACGCTGGACGA...CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AGGAGTGTAAGTGAAAGCACAGACAGTCGGAGACTCGGCCAGTGTAGACAGACCCTTCCTTCTCCACTTTaGCAAAGGTGGCCACCTTGT +
Preference number: 4 (lower is better)
Translates to: RSVSESTDSRRLGQCRQTLPSPL*QRWPPC
Trigger: ACAAGGTGGCCACCTTTGCCAAAGTGGAGAAGGAAG...GGTCTGTCTACACTGGCCGAGTCTCCGACTGTCTGTGCTTTCACTTACACTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCATCATCTGCTTCCCTTaGGCTGAGAGCTCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: RIRFNGHYEGIVHRSKPGIICFP*AESSRG
Trigger: ACCCCTGGAGCTCTCAGCCCAAGGGAAGCAGATGAT...GCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CGCGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCACTAAGTAAGCAGGGATaGGGGGTGGCAAGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: RGGGSGLMVTMRVSYIVPLSKQG*GVARGV
Trigger: CACTCCTCTTGCCACCCCCCATCCCTGCTTACTTAG...TGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAGACGCGGCGGCCGCGGTaGAGGATCAGGTTTAATGGT +
Preference number: 4 (lower is better)
Translates to: CRNCTYFYEPHGGMPTAETRRPR*RIRFNG
Trigger: ACCATTAAACCTGATCCTCCACCGCGGCCGCCGCGT...CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCTATGCCCTGTGGGGTaGTCTAGTGGCCTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RWRIRFNGHYEGIVHRSKLCPVG*SSGLAP
Trigger: TGGAGCTAGGCCACTAGACCACCCCACAGGGCATAG...CTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp TGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCTTGCGGTTCTCAGGGTaGCTCTGGGACAGGTACTCT +
Preference number: 4 (lower is better)
Translates to: WRIRFNGHYEGIVHRSKPLRFSG*LWDRYS
Trigger: AGAGTACCTGTCCCAGAGTCACCCTGAGAACCGCAA...GGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp AGGAGTGTAAGTGAAAGCACAGACAGTCGGAGACTCGGCCAGTGTAGACAGACCTTGCACTTATTTCTATaGACCCCATGGAGGGATGCC +
Preference number: 4 (lower is better)
Translates to: RSVSESTDSRRLGQCRQTLHLFL*TPWRDA
Trigger: GGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAA...GGTCTGTCTACACTGGCCGAGTCTCCGACTGTCTGTGCTTTCACTTACACTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp TGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAGGGTGATCTGCGCCGTTaGGGTTCTCAGGGTGACTCT +
Preference number: 4 (lower is better)
Translates to: CRNCTYFYEPHGGMPTAEGDLRR*GSQGDS
Trigger: AGAGTCACCCTGAGAACCGCAACGGCGCAGATCACC...CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp TTGTTTCGGGGGTGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGAGCCAGCAGGTGATCTaGGCCGTTGCGGTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: LFRGCRNCTYFYEPHGGMSQQVI*AVAVLR
Trigger: CCTGAGAACCGCAACGGCGCAGATCACCTGCTGGCT...CATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACACCCCCGAAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp TTGTTTCGGGGGTGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGTCCTCTCCAGCTTCTTaGGGCGACCGGAGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: LFRGCRNCTYFYEPHGGMSSPAS*GDRRSQ
Trigger: CTGAGACCTCCGGTCGCCGCAAGAAGCTGGAGAGGA...CATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACACCCCCGAAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp TTGTTTCGGGGGTGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGTCCGGCTGCCGACCATaGGCAGGTGTTTGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: LFRGCRNCTYFYEPHGGMSGCRP*AGVCGS
Trigger: ACTTCCGCAAACACCTGCGCATGGTCGGCAGCCGGA...CATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACACCCCCGAAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp AGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCGATGTCCTCGAAGGTTaGGTGCTCATGGTCGTAGAG +
Preference number: 4 (lower is better)
Translates to: RIRFNGHYEGIVHRSKPGDVLEG*VLMVVE
Trigger: CTCTACGACCATGAGCACGCAACCTTCGAGGACATC...GCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CGCGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCATACGTCTCGATCATCTaGTTCCCTTGGGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: RGGGSGLMVTMRVSYIVPYVSII*FPWAES
Trigger: GCTCTCAGCCCAAGGGAAGCAGATGATCGAGACGTA...TGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp TTGTTTCGGGGGTGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGGAGCAACGTCTGAGGTaGCCTGAAGTGGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LFRGCRNCTYFYEPHGGMEQRLR*PEVAPG
Trigger: GCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTC...CATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACACCCCCGAAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TTGTTTCGGGGGTGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGAAGTGTCGGCTTTCATaGGGGTGGGGTCGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LFRGCRNCTYFYEPHGGMKCRLS*GWGRSR
Trigger: CCTGGAGCGACCCCACCCCCATGAAAGCCGACACTT...CATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACACCCCCGAAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000265663.12
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCCTGTCTCGGGAGTCGTaGGAAGTGTCGGCTTTCATG +
Preference number: 4 (lower is better)
Translates to: WRIRFNGHYEGIVHRSKPLSRES*EVSAFM
Trigger: CATGAAAGCCGACACTTCCCACGACTCCCGAGACAG...GGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371472.6
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCGATGACGTTCGGCTCTaGGTTCACTTTGCTCATCAG +
Preference number: 4 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPDDVRL*VHFAHQ
Trigger: CTGATGAGCAAAGTGAACCCAGAGCCGAACGTCATC...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCACAGCTTCTCTCCATTaGGGTTCCCCAGAATGTAGC +
Preference number: 4 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPTASLH*GSPECS
Trigger: GCTACATTCTGGGGAACCCCAATGGAGAGAAGCTGT...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCACAGCTTCTCTCCATTaGGGTTCCCCAGAATGTAGC +
Preference number: 4 (lower is better)
Translates to: GSGLMVTMRVSYIVPSPATASLH*GSPECS
Trigger: GCTACATTCTGGGGAACCCCAATGGAGAGAAGCTGT...GGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCAGGGTCCTGAGGTTCTaGAACAGCTTCTCTCCATTG +
Preference number: 4 (lower is better)
Translates to: GSGLMVTMRVSYIVPSPARVLRF*NSFSPL
Trigger: CAATGGAGAGAAGCTGTTCCAGAACCTCAGGACCCT...GGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGATCATCTGCTTCCCTTaGGCTGAGAGCTCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: RWRIRFNGHYEGIVHRSKIICFP*AESSRG
Trigger: ACCCCTGGAGCTCTCAGCCCAAGGGAAGCAGATGAT...CTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCATCATCTGCTTCCCTTaGGCTGAGAGCTCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: WRIRFNGHYEGIVHRSKPIICFP*AESSRG
Trigger: ACCCCTGGAGCTCTCAGCCCAAGGGAAGCAGATGAT...GGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCCTAAGTAAGCAGGGATaGGGGGTGGCAAGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: WRIRFNGHYEGIVHRSKPLSKQG*GVARGV
Trigger: CACTCCTCTTGCCACCCCCCATCCCTGCTTACTTAG...GGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAGTCCAGGGGCCCACTGTaGTGCCAGCGAGTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: CRNCTYFYEPHGGMPTAESRGPL*CQRVSQ
Trigger: TTGAGAAACTCGCTGGCACCACAGTGGGCCCCTGGA...CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TTGTTTCGGGGGTGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCATCCTGCTGGCCGTaGACAAAAGCTGGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LFRGCRNCTYFYEPHGGMPSCWP*TKAGSS
Trigger: GGAGCTCCCAGCTTTTGTCCACGGCCAGCAGGATGG...CATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACACCCCCGAAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TTGTTTCGGGGGTGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGGTGACCTCACAGGAGTaGGCCCAGAAGCTGGGCACA +
Preference number: 4 (lower is better)
Translates to: LFRGCRNCTYFYEPHGGMVTSQE*AQKLGT
Trigger: TGTGCCCAGCTTCTGGGCCCACTCCTGTGAGGTCAC...CATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACACCCCCGAAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCACTGCACACACAGTGTaGCGTGAGGGACATACAGCC +
Preference number: 4 (lower is better)
Translates to: WRIRFNGHYEGIVHRSKPTAHTV*REGHTA
Trigger: GGCTGTATGTCCCTCACGCCACACTGTGTGTGCAGT...GGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp TGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAGTTGCGGTTCTCAGGGTaGCTCTGGGACAGGTACTCT +
Preference number: 4 (lower is better)
Translates to: CRNCTYFYEPHGGMPTAELRFSG*LWDRYS
Trigger: AGAGTACCTGTCCCAGAGTCACCCTGAGAACCGCAA...CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp GGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCTGGCCACCTTGTTCTTaGGGAGATAGAGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: GGGSGLMVTMRVSYIVPSWPPCS*GDRGVQ
Trigger: CTGGACACCTCTATCTCCTCAAGAACAAGGTGGCCA...GCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp AGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCAGCCGCTTCCAGAAGTaGATCATGTCCTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: RIRFNGHYEGIVHRSKPGSRFQK*IMSSSF
Trigger: GAAGGAAGAGGACATGATTCACTTCTGGAAGCGGCT...GCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp TTGTTTCGGGGGTGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGAACCTGAGCAACGTCTaGGGTGCCCTGAAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: LFRGCRNCTYFYEPHGGMNLSNV*GALKWL
Trigger: GAGCCACTTCAGGGCACCTCAGACGTTGCTCAGGTT...CATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACACCCCCGAAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGCCATGCGCAGGTGTTTaGGGAAGTTCCTCTGGATTA +
Preference number: 4 (lower is better)
Translates to: GGSGLMVTMRVSYIVPSPPCAGV*GSSSGL
Trigger: TAATCCAGAGGAACTTCCGCAAACACCTGCGCATGG...CGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371475.9
CDS-3UTR GCA 90 bp TGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGATGTCCTCGAAGGTTaGGTGCTCATGGTCGTAGAG +
Preference number: 4 (lower is better)
Translates to: WRIRFNGHYEGIVHRSKPDVLEG*VLMVVE
Trigger: CTCTACGACCATGAGCACGCAACCTTCGAGGACATC...GGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp CGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGTACGTCTCGATCATCTaGTTCCCTTGGGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: RWRIRFNGHYEGIVHRSKYVSII*FPWAES
Trigger: GCTCTCAGCCCAAGGGAAGCAGATGATCGAGACGTA...CTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TTGTTTCGGGGGTGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCAGGCTCCCCAGAGATaGTGTACACTCGAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LFRGCRNCTYFYEPHGGMQAPQR*CTLEAE
Trigger: CTCAGCCTCGAGTGTACACCATCTCTGGGGAGCCTG...CATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACACCCCCGAAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCAATGAGCATGACCTTTaGTGGCACGAAGCCTTCGGT +
Preference number: 4 (lower is better)
Translates to: RIRFNGHYEGIVHRSKPGNEHDL*WHEAFG
Trigger: ACCGAAGGCTTCGTGCCACCAAAGGTCATGCTCATT...GCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGATGACGTTCGGCTCTaGGTTCACTTTGCTCATCAG +
Preference number: 4 (lower is better)
Translates to: GGSGLMVTMRVSYIVPSPDDVRL*VHFAHQ
Trigger: CTGATGAGCAAAGTGAACCCAGAGCCGAACGTCATC...CGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp TGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCAGCCGCTTCCAGAAGTaGATCATGTCCTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: WRIRFNGHYEGIVHRSKPSRFQK*IMSSSF
Trigger: GAAGGAAGAGGACATGATTCACTTCTGGAAGCGGCT...GGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp TGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAGCCCCTGAACACCGCTTaGATAGTTGTGGTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: CRNCTYFYEPHGGMPTAEPLNTA*IVVVAV
Trigger: GACAGCAACCACAACTATGCAAGCGGTGTTCAGGGG...CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265663.12
CDS-3UTR GCA 90 bp CGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCATGCGCAGGTGTTTaGGGAAGTTCCTCTGGATTA +
Preference number: 4 (lower is better)
Translates to: RWRIRFNGHYEGIVHRSKPCAGV*GSSSGL
Trigger: TAATCCAGAGGAACTTCCGCAAACACCTGCGCATGG...CTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371475.9
CDS-3UTR GCA 90 bp TGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAGTACGTCTCGATCATCTaGTTCCCTTGGGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: CRNCTYFYEPHGGMPTAEYVSII*FPWAES
Trigger: GCTCTCAGCCCAAGGGAAGCAGATGATCGAGACGTA...CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp TTGTTTCGGGGGTGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGAGGGGCCCACTGTGGTaGCAGCGAGTTTCTCAAAAC +
Preference number: 4 (lower is better)
Translates to: LFRGCRNCTYFYEPHGGMRGPLW*QRVSQN
Trigger: GTTTTGAGAAACTCGCTGGCACCACAGTGGGCCCCT...CATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACACCCCCGAAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TTGTTTCGGGGGTGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCTGTCTCGGGAGTCGTaGGAAGTGTCGGCTTTCATG +
Preference number: 4 (lower is better)
Translates to: LFRGCRNCTYFYEPHGGMLSRES*EVSAFM
Trigger: CATGAAAGCCGACACTTCCCACGACTCCCGAGACAG...CATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACACCCCCGAAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265663.12
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CGCGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAGCATTTTCCAGATCTTaGCTCCCTTGTGGTAGACGT +
Preference number: 4 (lower is better)
Translates to: RGGGSGLMVTMRVSYIVPAFSRS*LPCGRR
Trigger: ACGTCTACCACAAGGGAGCCAAGATCTGGAAAATGC...TGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp AGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCGCATTTTCCAGATCTTaGCTCCCTTGTGGTAGACGT +
Preference number: 4 (lower is better)
Translates to: RIRFNGHYEGIVHRSKPGAFSRS*LPCGRR
Trigger: ACGTCTACCACAAGGGAGCCAAGATCTGGAAAATGC...GCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGTGTCCAGGACCTCCCTaGCAGAAAATCAGCATTTTC +
Preference number: 4 (lower is better)
Translates to: GGSGLMVTMRVSYIVPSPCPGPP*QKISIF
Trigger: GAAAATGCTGATTTTCTGCCAGGGAGGTCCTGGACA...CGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCTTCCTTCTCCACTTTaGCAAAGGTGGCCACCTTGT +
Preference number: 4 (lower is better)
Translates to: RWRIRFNGHYEGIVHRSKLPSPL*QRWPPC
Trigger: ACAAGGTGGCCACCTTTGCCAAAGTGGAGAAGGAAG...CTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGGATGACGTTCGGCTCTaGGTTCACTTTGCTCATCAG +
Preference number: 4 (lower is better)
Translates to: RWRIRFNGHYEGIVHRSKDDVRL*VHFAHQ
Trigger: CTGATGAGCAAAGTGAACCCAGAGCCGAACGTCATC...CTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp GGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCACAGCTTCTCTCCATTaGGGTTCCCCAGAATGTAGC +
Preference number: 4 (lower is better)
Translates to: GGGSGLMVTMRVSYIVPSTASLH*GSPECS
Trigger: GCTACATTCTGGGGAACCCCAATGGAGAGAAGCTGT...GCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGACAGCTTCTCTCCATTaGGGTTCCCCAGAATGTAGC +
Preference number: 4 (lower is better)
Translates to: RWRIRFNGHYEGIVHRSKTASLH*GSPECS
Trigger: GCTACATTCTGGGGAACCCCAATGGAGAGAAGCTGT...CTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TTGTTTCGGGGGTGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGATCATCTGCTTCCCTTaGGCTGAGAGCTCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: LFRGCRNCTYFYEPHGGMIICFP*AESSRG
Trigger: ACCCCTGGAGCTCTCAGCCCAAGGGAAGCAGATGAT...CATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACACCCCCGAAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp CGCGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCATTGCTGTCTGGAAGCTaGAAAGATTTTCCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: RGGGSGLMVTMRVSYIVPLLSGS*KDFPWG
Trigger: TCCCCAAGGAAAATCTTTTCAGCTTCCAGACAGCAA...TGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp CGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGTTGCACTTATTTCTATaGACCCCATGGAGGGATGCC +
Preference number: 4 (lower is better)
Translates to: RWRIRFNGHYEGIVHRSKLHLFL*TPWRDA
Trigger: GGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAA...CTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCTTGCGGAAGTTCCTCTaGATTACAGACGCGGAATCA +
Preference number: 4 (lower is better)
Translates to: WRIRFNGHYEGIVHRSKPLRKFL*ITDAES
Trigger: TGATTCCGCGTCTGTAATCCAGAGGAACTTCCGCAA...GGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371475.9
CDS-3UTR CCA 90 bp TGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAGAATGAGCATGACCTTTaGTGGCACGAAGCCTTCGGT +
Preference number: 4 (lower is better)
Translates to: CRNCTYFYEPHGGMPTAENEHDL*WHEAFG
Trigger: ACCGAAGGCTTCGTGCCACCAAAGGTCATGCTCATT...CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp CGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGGCATTTTCCAGATCTTaGCTCCCTTGTGGTAGACGT +
Preference number: 4 (lower is better)
Translates to: RWRIRFNGHYEGIVHRSKAFSRS*LPCGRR
Trigger: ACGTCTACCACAAGGGAGCCAAGATCTGGAAAATGC...CTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp CGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGTTGCTGTCTGGAAGCTaGAAAGATTTTCCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: RWRIRFNGHYEGIVHRSKLLSGS*KDFPWG
Trigger: TCCCCAAGGAAAATCTTTTCAGCTTCCAGACAGCAA...CTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCAAGTTCGAGATGGCTTaGATAGTTGTGGTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: GGGSGLMVTMRVSYIVPSKFEMA*IVVVAV
Trigger: GACAGCAACCACAACTATGCAAGCCATCTCGAACTT...GCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437259.5
CDS-3UTR CCA 90 bp AGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCGTTGTGGTTGCTGTCTaGAAGCTGAAAAGATTTTCC +
Preference number: 4 (lower is better)
Translates to: RIRFNGHYEGIVHRSKPGVVVAV*KLKRFS
Trigger: GGAAAATCTTTTCAGCTTCCAGACAGCAACCACAAC...GCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAGTTGCGGAAGTTCCTCTaGATTACAGACGCGGAATCA +
Preference number: 4 (lower is better)
Translates to: CRNCTYFYEPHGGMPTAELRKFL*ITDAES
Trigger: TGATTCCGCGTCTGTAATCCAGAGGAACTTCCGCAA...CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371475.9
CDS-3UTR CCA 90 bp TTGTTTCGGGGGTGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGAATGAGCATGACCTTTaGTGGCACGAAGCCTTCGGT +
Preference number: 4 (lower is better)
Translates to: LFRGCRNCTYFYEPHGGMNEHDL*WHEAFG
Trigger: ACCGAAGGCTTCGTGCCACCAAAGGTCATGCTCATT...CATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACACCCCCGAAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CCA 90 bp TTGTTTCGGGGGTGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCTTCCTTCTCCACTTTaGCAAAGGTGGCCACCTTGT +
Preference number: 4 (lower is better)
Translates to: LFRGCRNCTYFYEPHGGMLPSPL*QRWPPC
Trigger: ACAAGGTGGCCACCTTTGCCAAAGTGGAGAAGGAAG...CATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACACCCCCGAAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR TCA 90 bp TTGTTTCGGGGGTGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGTTGCACTTATTTCTATaGACCCCATGGAGGGATGCC +
Preference number: 4 (lower is better)
Translates to: LFRGCRNCTYFYEPHGGMLHLFL*TPWRDA
Trigger: GGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAA...CATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACACCCCCGAAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp GGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCTTGCATAGTTGTGGTTaGTGTCTGGAAGCTGAAAAG +
Preference number: 4 (lower is better)
Translates to: GGGSGLMVTMRVSYIVPSLHSCG*CLEAEK
Trigger: CTTTTCAGCTTCCAGACAGCAACCACAACTATGCAA...GCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR GCA 90 bp TGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCTTGCATAGTTGTGGTTaGTGTCTGGAAGCTGAAAAG +
Preference number: 4 (lower is better)
Translates to: WRIRFNGHYEGIVHRSKPLHSCG*CLEAEK
Trigger: CTTTTCAGCTTCCAGACAGCAACCACAACTATGCAA...GGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS CCA 90 bp TGGCCTCGCTCCTCAGCGCCCTCCTCCTGGAGGCGGCGGCGCCCATaGTCGAGGCGGCGGCGCATCCCCCGGGCCTCAGAGCGCGCCCCG +
Preference number: 5 (lower is better)
Translates to: WPRSSAPSSWRRRRP*SRRRRIPRASERAP
Trigger: CGGGGCGCGCTCTGAGGCCCGGGGGATGCGCCGCCGCCTCGACCATGGGCGCCGCCGCCTCCAGGAGGAGGGCGCTGAGGAGCGAGGCCA
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS CCA 90 bp TGGCCGCCACCGAGGACATGGCCTCGCTCCTCAGCGCCCTCCTCCTaGAGGCGGCGGCGCCCATGGTCGAGGCGGCGGCGCATCCCCCGG +
Preference number: 5 (lower is better)
Translates to: WPPPRTWPRSSAPSS*RRRRPWSRRRRIPR
Trigger: CCGGGGGATGCGCCGCCGCCTCGACCATGGGCGCCGCCGCCTCCAGGAGGAGGGCGCTGAGGAGCGAGGCCATGTCCTCGGTGGCGGCCA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp GCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGAGGGGGCATCCGGGGCACTCCTaGGAGCCCTGGCGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: APRTRATLVLVIDTAGRGHPGHS*EPWRLP
Trigger: GGGCAGCCGCCAGGGCTCCAAGGAGTGCCCCGGATG...CCCCCTCCCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS CCA 90 bp CTCCAAACGCTCGGGCTGCTCGCACTTTGGCCGCCACCGAGGACATaGCCTCGCTCCTCAGCGCCCTCCTCCTGGAGGCGGCGGCGCCCA +
Preference number: 5 (lower is better)
Translates to: LQTLGLLALWPPPRT*PRSSAPSSWRRRRP
Trigger: TGGGCGCCGCCGCCTCCAGGAGGAGGGCGCTGAGGAGCGAGGCCATGTCCTCGGTGGCGGCCAAAGTGCGAGCAGCCCGAGCGTTTGGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS CCA 90 bp GGGCAGCGGCCTGATGTGGGAAGGGAGACCCTGGTGCGAGGCCGGTaGAAGGCGCGTGCAGGCATCAGCTCCAGCCAAGTCCGCCGGGCG +
Preference number: 5 (lower is better)
Translates to: GQRPDVGRETLVRGR*KARAGISSSQVRRA
Trigger: CGCCCGGCGGACTTGGCTGGAGCTGATGCCTGCACGCGCCTTCCACCGGCCTCGCACCAGGGTCTCCCTTCCCACATCAGGCCGCTGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371482.5
CDS-3UTR CAA 90 bp GACGCTGGCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGCATCCGGGGCACTCCTaGGAGCCCTGGCGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: DAGPTHTGHPGAGDRYGRHPGHS*EPWRLP
Trigger: GGGCAGCCGCCAGGGCTCCAAGGAGTGCCCCGGATG...CCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGCCAGCGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp GACAGAGCCAGGCTGGGCAGCCCGGCGACGCTGGCCCCACGCACACGGGCCACCATCCTCTCCAGCTTCTaGCGGCGACCGGAGGTCTCA +
Preference number: 5 (lower is better)
Translates to: DRARLGSPATLAPRTRATILSSF*RRPEVS
Trigger: TGAGACCTCCGGTCGCCGCAAGAAGCTGGAGAGGAT...GGTGGCCCGTGTGCGTGGGGCCAGCGTCGCCGGGCTGCCCAGCCTGGCTCTGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS GCA 90 bp GTGGTCCCAGGCAGAGCTGGCTGGACTCGGGTTGGGGCGGAGTCCTaGTCGGGGTGTAGAGGAGCACTGCCCGGGCTGGGCCTCACCATG +
Preference number: 5 (lower is better)
Translates to: VVPGRAGWTRVGAES*SGCRGALPGLGLTM
Trigger: CATGGTGAGGCCCAGCCCGGGCAGTGCTCCTCTACACCCCGAGCAGGACTCCGCCCCAACCCGAGTCCAGCCAGCTCTGCCTGGGACCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371482.5
ENST00000484316.5
CDS CCA 90 bp CTCTCCAGCTTCTTGCGGCGACCGGAGGTCTCAGGCAGAGGTGGCTaGTCCAGCCCAAAGGCCCGAGGGGTGGGGCCAGGAGCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: LSSFLRRPEVSGRGG*SSPKARGVGPGASW
Trigger: CCAGCTGGCTCCTGGCCCCACCCCTCGGGCCTTTGGGCTGGACCAGCCACCTCTGCCTGAGACCTCCGGTCGCCGCAAGAAGCTGGAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS CCA 90 bp CCCACAGGGCCCGAAAGCCCCATCCCGGAGGGTCCTCCAAGCAAGTaGGAGGACCATACAGAGGTCGCCGCCAGCCCGGCAGGACAGGCC +
Preference number: 5 (lower is better)
Translates to: PTGPESPIPEGPPSK*EDHTEVAASPAGQA
Trigger: GGCCTGTCCTGCCGGGCTGGCGGCGACCTCTGTATGGTCCTCCCACTTGCTTGGAGGACCCTCCGGGATGGGGCTTTCGGGCCCTGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371482.5
CDS TCA 90 bp GGGAAGTGTCGGCTTTCATGGGGGTGGGGTCGCTCCAGGACCGGCTaGAGCTCCGCTCGCGCCGCTCAGCGAACGTCTGGGCCTTCACCC +
Preference number: 5 (lower is better)
Translates to: GKCRLSWGWGRSRTG*SSARAAQRTSGPSP
Trigger: GGGTGAAGGCCCAGACGTTCGCTGAGCGGCGCGAGCGGAGCTTCAGCCGGTCCTGGAGCGACCCCACCCCCATGAAAGCCGACACTTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000265663.12
ENST00000371468.1
ENST00000371472.6
ENST00000371474.7
ENST00000371475.9
ENST00000371482.5
ENST00000437259.5
ENST00000484316.5
CDS CCA 90 bp CATCCTCTCCAGCTTCTTGCGGCGACCGGAGGTCTCAGGCAGAGGTaGCTGGTCCAGCCCAAAGGCCCGAGGGGTGGGGCCAGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: HPLQLLAATGGLRQR*LVQPKGPRGGARSQ
Trigger: CTGGCTCCTGGCCCCACCCCTCGGGCCTTTGGGCTGGACCAGCCACCTCTGCCTGAGACCTCCGGTCGCCGCAAGAAGCTGGAGAGGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS CCA 90 bp CTGTGGACACCACTGGGCAGCGGCCTGATGTGGGAAGGGAGACCCTaGTGCGAGGCCGGTGGAAGGCGCGTGCAGGCATCAGCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: LWTPLGSGLMWEGRP*CEAGGRRVQASAPA
Trigger: GGCTGGAGCTGATGCCTGCACGCGCCTTCCACCGGCCTCGCACCAGGGTCTCCCTTCCCACATCAGGCCGCTGCCCAGTGGTGTCCACAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371482.5
CDS-3UTR CAA 90 bp GTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCGGCCATCCTCTCCAGCTTCTaGCGGCGACCGGAGGTCTCA +
Preference number: 5 (lower is better)
Translates to: VSAWPLSIHGPQGGILPAILSSF*RRPEVS
Trigger: TGAGACCTCCGGTCGCCGCAAGAAGCTGGAGAGGAT...GGCCGGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp GACAGAGCCAGGCTGGGCAGCCCGGCGACGCTGGCCCCACGCACACGGGCCACCTCAGCCTTGGGCACCTaGGAGGAAATGAGCATGACC +
Preference number: 5 (lower is better)
Translates to: DRARLGSPATLAPRTRATSALGT*EEMSMT
Trigger: GGTCATGCTCATTTCCTCCAAGGTGCCCAAGGCTGA...GGTGGCCCGTGTGCGTGGGGCCAGCGTCGCCGGGCTGCCCAGCCTGGCTCTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp GACAGAGCCAGGCTGGGCAGCCCGGCGACGCTGGCCCCACGCACACGGGCCACCGGGATGTACTCAGCCTaGGGCACCTTGGAGGAAATG +
Preference number: 5 (lower is better)
Translates to: DRARLGSPATLAPRTRATGMYSA*GTLEEM
Trigger: CATTTCCTCCAAGGTGCCCAAGGCTGAGTACATCCC...GGTGGCCCGTGTGCGTGGGGCCAGCGTCGCCGGGCTGCCCAGCCTGGCTCTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS GCA 90 bp TCCGCTCGCGCCGCTCAGCGAACGTCTGGGCCTTCACCCTCCGGCTaGCGACCATGCGCAGGTGTTTGCGGAAGTTCCCCTTCGGTGTGG +
Preference number: 5 (lower is better)
Translates to: SARAAQRTSGPSPSG*RPCAGVCGSSPSVW
Trigger: CCACACCGAAGGGGAACTTCCGCAAACACCTGCGCATGGTCGGCAGCCGGAGGGTGAAGGCCCAGACGTTCGCTGAGCGGCGCGAGCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371482.5
CDS GCA 90 bp TGGACACCACTGGGCAGCGGCCTGATGTGGGAAGGGAGACCCTGGTaGGAGGCCGGTGGAAGGCGCGTGCAGGCATCAGCTCCAGCCAAG +
Preference number: 5 (lower is better)
Translates to: WTPLGSGLMWEGRPW*EAGGRRVQASAPAK
Trigger: CTTGGCTGGAGCTGATGCCTGCACGCGCCTTCCACCGGCCTCGCACCAGGGTCTCCCTTCCCACATCAGGCCGCTGCCCAGTGGTGTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371482.5
CDS GCA 90 bp TCCGCTCGCGCCGCTCAGCGAACGTCTGGGCCTTCACCCTCCGGCTaGCGACCATGCGCAGGTGTTTGCGGAAGTTCCTGGGGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: SARAAQRTSGPSPSG*RPCAGVCGSSWGRK
Trigger: CTTCCTCCCCCAGGAACTTCCGCAAACACCTGCGCATGGTCGGCAGCCGGAGGGTGAAGGCCCAGACGTTCGCTGAGCGGCGCGAGCGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371468.1
CDS-3UTR CAA 90 bp CCTGAGCAACGTCTGAGGTGCCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACACGGGCTGCTCGCACTTaGGCCGCCACCGAGGACATG +
Preference number: 5 (lower is better)
Translates to: PEQRLRCPEVAPGETGATRAART*AATEDM
Trigger: CATGTCCTCGGTGGCGGCCAAAGTGCGAGCAGCCCG...TGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGCATCCGGGGCACTCCTaGGAGCCCTGGCGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLHPGHS*EPWRLP
Trigger: GGGCAGCCGCCAGGGCTCCAAGGAGTGCCCCGGATG...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS GCA 90 bp GCCGCTCAGCGAACGTCTGGGCCTTCACCCTCCGGCTGCCGACCATaGGCAGGTGTTTGCGGAAGTTCCCCTTCGGTGTGGGAAGCCAGT +
Preference number: 5 (lower is better)
Translates to: AAQRTSGPSPSGCRP*AGVCGSSPSVWEAS
Trigger: ACTGGCTTCCCACACCGAAGGGGAACTTCCGCAAACACCTGCGCATGGTCGGCAGCCGGAGGGTGAAGGCCCAGACGTTCGCTGAGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371482.5
CDS GCA 90 bp TCCGCTCGCGCCGCTCAGCGAACGTCTGGGCCTTCACCCTCCGGCTaGCGACCATGCGCAGGTGTTTGCGGAAGTTCGAGATGGCTTGCA +
Preference number: 5 (lower is better)
Translates to: SARAAQRTSGPSPSG*RPCAGVCGSSRWLA
Trigger: TGCAAGCCATCTCGAACTTCCGCAAACACCTGCGCATGGTCGGCAGCCGGAGGGTGAAGGCCCAGACGTTCGCTGAGCGGCGCGAGCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437259.5
CDS-3UTR CAA 90 bp GCAGGTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCTCAGCCTTGGGCACCTaGGAGGAAATGAGCATGACC +
Preference number: 5 (lower is better)
Translates to: AGQCLAAEHPRATGRDPPSALGT*EEMSMT
Trigger: GGTCATGCTCATTTCCTCCAAGGTGCCCAAGGCTGA...GGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGACCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp CCCCTGGAAAGCACTGAGAGGACAGACCCACGCGGCGGCCGCGGTGGAGGATCAGGCTCTGGGTTCACTTaGCTCATCAGGCGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: PLESTERTDPRGGRGGGSGSGFT*LIRRLS
Trigger: GCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGCC...TGATCCTCCACCGCGGCCGCCGCGTGGGTCTGTCCTCTCAGTGCTTTCCAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS GCA 90 bp TCCGCTCGCGCCGCTCAGCGAACGTCTGGGCCTTCACCCTCCGGCTaGCGACCATGCGCAGGTGTTTGCGGAAGTTCCTCTGGATTACAG +
Preference number: 5 (lower is better)
Translates to: SARAAQRTSGPSPSG*RPCAGVCGSSSGLQ
Trigger: CTGTAATCCAGAGGAACTTCCGCAAACACCTGCGCATGGTCGGCAGCCGGAGGGTGAAGGCCCAGACGTTCGCTGAGCGGCGCGAGCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371475.9
CDS-3UTR CAA 90 bp AATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCGCCCCAGCCGGGCTGCTCGCACTTaGGCCGCCACCGAGGACATG +
Preference number: 5 (lower is better)
Translates to: NGHYEGIVHRSKPGPRPSRAART*AATEDM
Trigger: CATGTCCTCGGTGGCGGCCAAAGTGCGAGCAGCCCG...GCTGGGGCGGGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp GCAGGAAGGCCCTGCAGCAGTGACCTCACAGGAGTGGGCCCAGAAGCTGGGCACATCCTCTCCAGCTTCTaGCGGCGACCGGAGGTCTCA +
Preference number: 5 (lower is better)
Translates to: AGRPCSSDLTGVGPEAGHILSSF*RRPEVS
Trigger: TGAGACCTCCGGTCGCCGCAAGAAGCTGGAGAGGAT...GTGCCCAGCTTCTGGGCCCACTCCTGTGAGGTCACTGCTGCAGGGCCTTCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp GACGCTGGCCCCACGCACACGGGCCACCCTGGTGCTGGTGATCGATACGGCAGGGGGATGTACTCAGCCTaGGGCACCTTGGAGGAAATG +
Preference number: 5 (lower is better)
Translates to: DAGPTHTGHPGAGDRYGRGMYSA*GTLEEM
Trigger: CATTTCCTCCAAGGTGCCCAAGGCTGAGTACATCCC...CCTGCCGTATCGATCACCAGCACCAGGGTGGCCCGTGTGCGTGGGGCCAGCGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp CACACAGTGTGGCGTGAGGGACATACAGCCCTCTCCCTGGTGCCCTCAGGCGGCGGCTCTGGGTTCACTTaGCTCATCAGGCGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: HTVWREGHTALSLVPSGGGSGFT*LIRRLS
Trigger: GCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGCC...GCCGCCTGAGGGCACCAGGGAGAGGGCTGTATGTCCCTCACGCCACACTGTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp GACAGAGCCAGGCTGGGCAGCCCGGCGACGCTGGCCCCACGCACACGGGCCACCCTGCTTCCCTTTGAATaGTTTCGGGGGTGTAGAAAT +
Preference number: 5 (lower is better)
Translates to: DRARLGSPATLAPRTRATLLPFE*FRGCRN
Trigger: ATTTCTACACCCCCGAAACAATTCAAAGGGAAGCAG...GGTGGCCCGTGTGCGTGGGGCCAGCGTCGCCGGGCTGCCCAGCCTGGCTCTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp GTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCGGCCGAACACCGAGATGGCTaGCATAGTTGTGGTTGCTGT +
Preference number: 5 (lower is better)
Translates to: VSAWPLSIHGPQGGILPAEHRDG*HSCGCC
Trigger: ACAGCAACCACAACTATGCAAGCCATCTCGGTGTTC...GGCCGGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371473.7
ENST00000371475.9
CDS-3UTR CAA 90 bp CCCCACCCAGAGCCTCCTCTGAAGGAGGGGACGCTGCGCCCTTCCTTCCTGCTGTCAGCCTTGGGCACCTaGGAGGAAATGAGCATGACC +
Preference number: 5 (lower is better)
Translates to: PHPEPPLKEGTLRPSFLLSALGT*EEMSMT
Trigger: GGTCATGCTCATTTCCTCCAAGGTGCCCAAGGCTGA...CAGCAGGAAGGAAGGGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS GCA 90 bp GCCGCTCAGCGAACGTCTGGGCCTTCACCCTCCGGCTGCCGACCATaGGCAGGTGTTTGCGGAAGTTCCTCTGGATTACAGACGCGGAAT +
Preference number: 5 (lower is better)
Translates to: AAQRTSGPSPSGCRP*AGVCGSSSGLQTRN
Trigger: ATTCCGCGTCTGTAATCCAGAGGAACTTCCGCAAACACCTGCGCATGGTCGGCAGCCGGAGGGTGAAGGCCCAGACGTTCGCTGAGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371475.9
CDS-3UTR CAA 90 bp CCCCTGGAAAGCACTGAGAGGACAGACCCACGCGGCGGCCGCGGTGGAGGATCAACCATGCGCAGGTGTTaGCGGAAGTTCCTCTGGATT +
Preference number: 5 (lower is better)
Translates to: PLESTERTDPRGGRGGGSTMRRC*RKFLWI
Trigger: AATCCAGAGGAACTTCCGCAAACACCTGCGCATGGT...TGATCCTCCACCGCGGCCGCCGCGTGGGTCTGTCCTCTCAGTGCTTTCCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371473.7
ENST00000371475.9
CDS-3UTR CAA 90 bp CACACAGTGTGGCGTGAGGGACATACAGCCCTCTCCCTGGTGCCCTCAGGCGGCTCAGCCTTGGGCACCTaGGAGGAAATGAGCATGACC +
Preference number: 5 (lower is better)
Translates to: HTVWREGHTALSLVPSGGSALGT*EEMSMT
Trigger: GGTCATGCTCATTTCCTCCAAGGTGCCCAAGGCTGA...GCCGCCTGAGGGCACCAGGGAGAGGGCTGTATGTCCCTCACGCCACACTGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp GTCAGTGCCTGGCCGCTGAGCATCCACGGGCCACAGGGCGGGATCCTCCCGGCCCTGCTTCCCTTTGAATaGTTTCGGGGGTGTAGAAAT +
Preference number: 5 (lower is better)
Translates to: VSAWPLSIHGPQGGILPALLPFE*FRGCRN
Trigger: ATTTCTACACCCCCGAAACAATTCAAAGGGAAGCAG...GGCCGGGAGGATCCCGCCCTGTGGCCCGTGGATGCTCAGCGGCCAGGCACTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS GCA 90 bp TGTCGTCAGACACACGGTCAACGCTGTACATCCTCTCCAGCTTCTTaGGGCGACCGGAGGTCTCAGGCAGAGGTGGCTGGTCCAGCCCAA +
Preference number: 5 (lower is better)
Translates to: CRQTHGQRCTSSPAS*GDRRSQAEVAGPAQ
Trigger: TTGGGCTGGACCAGCCACCTCTGCCTGAGACCTCCGGTCGCCGCAAGAAGCTGGAGAGGATGTACAGCGTTGACCGTGTGTCTGACGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp GGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCATCCGGGGCACTCCTaGGAGCCCTGGCGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: GSGLMVTMRVSYIVPSPAHPGHS*EPWRLP
Trigger: GGGCAGCCGCCAGGGCTCCAAGGAGTGCCCCGGATG...GGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp AATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCGCCCCAGCGGCTCTGGGTTCACTTaGCTCATCAGGCGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: NGHYEGIVHRSKPGPRPSGSGFT*LIRRLS
Trigger: GCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGCC...GCTGGGGCGGGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS GCA 90 bp AGCCCGGCCCCTCACAGGACGTCGTCAAAGTCCAGCAGCTTCGAGTaGTGGCGGCTCTTCCACAGGCGATACAACCGGAAGTCAAAGTAC +
Preference number: 5 (lower is better)
Translates to: SPAPHRTSSKSSSFE*WRLFHRRYNRKSKY
Trigger: GTACTTTGACTTCCGGTTGTATCGCCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCTGGACTTTGACGACGTCCTGTGAGGGGCCGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371472.6
CDS GCA 90 bp TCTGCAGGTCACTGCTCTGGGCCTTCACCCTCCGGCTGCCGACCATaGGCAGGTGTTTGCGGAAGTTCCTCTGGATTACAGACGCGGAAT +
Preference number: 5 (lower is better)
Translates to: SAGHCSGPSPSGCRP*AGVCGSSSGLQTRN
Trigger: ATTCCGCGTCTGTAATCCAGAGGAACTTCCGCAAACACCTGCGCATGGTCGGCAGCCGGAGGGTGAAGGCCCAGAGCAGTGACCTGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371473.7
CDS CCA 90 bp CCGGCCCCTCACAGGACGTCGTCAAAGTCCAGCAGCTTCGAGTGCTaGCGGCTCTTCCACAGGCGATACAACCGGAAGTCAAAGTACGTC +
Preference number: 5 (lower is better)
Translates to: PAPHRTSSKSSSFEC*RLFHRRYNRKSKYV
Trigger: GACGTACTTTGACTTCCGGTTGTATCGCCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCTGGACTTTGACGACGTCCTGTGAGGGGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371472.6
CDS-3UTR CAA 90 bp CGCGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCACATCCGGGGCACTCCTaGGAGCCCTGGCGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: RGGGSGLMVTMRVSYIVPHPGHS*EPWRLP
Trigger: GGGCAGCCGCCAGGGCTCCAAGGAGTGCCCCGGATG...TGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp CCTGAGCAACGTCTGAGGTGCCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACAACCATGCGCAGGTGTTaGCGGAAGTTCCTCTGGATT +
Preference number: 5 (lower is better)
Translates to: PEQRLRCPEVAPGETGATTMRRC*RKFLWI
Trigger: AATCCAGAGGAACTTCCGCAAACACCTGCGCATGGT...TGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371475.9
CDS-3UTR CAA 90 bp CCCCACCCAGAGCCTCCTCTGAAGGAGGGGACGCTGCGCCCTTCCTTCCTGCTGTTTGCGGAAGTTCGCTaGCATAGTTGTGGTTGCTGT +
Preference number: 5 (lower is better)
Translates to: PHPEPPLKEGTLRPSFLLFAEVR*HSCGCC
Trigger: ACAGCAACCACAACTATGCAAGCGAACTTCCGCAAA...CAGCAGGAAGGAAGGGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371474.7
CDS-3UTR CAA 90 bp CCTGAGCAACGTCTGAGGTGCCCTGAAGTGGCTCCAGGCGAGACCGGAGCCACAACCATGCGCAGGTGTTaGCGGAAGTTCGCTTGCATA +
Preference number: 5 (lower is better)
Translates to: PEQRLRCPEVAPGETGATTMRRC*RKFACI
Trigger: TATGCAAGCGAACTTCCGCAAACACCTGCGCATGGT...TGTGGCTCCGGTCTCGCCTGGAGCCACTTCAGGGCACCTCAGACGTTGCTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371474.7
CDS GCA 90 bp GCCTCTGCCCCTCACAGGACGTCGTCAAAGTCCAGCAGCTTCGAGTaGTGGCGGCTCTTCCACAGGCGATACAACCGGAAGTCAAAGTAC +
Preference number: 5 (lower is better)
Translates to: ASAPHRTSSKSSSFE*WRLFHRRYNRKSKY
Trigger: GTACTTTGACTTCCGGTTGTATCGCCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCTGGACTTTGACGACGTCCTGTGAGGGGCAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000371482.5
ENST00000437259.5
CDS-3UTR CAA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCGGGCTGCTCGCACTTaGGCCGCCACCGAGGACATG +
Preference number: 5 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPRAART*AATEDM
Trigger: CATGTCCTCGGTGGCGGCCAAAGTGCGAGCAGCCCG...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp AATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCCGCCCCAGCGGATGTCCTCGAAGGTaGCGTGCTCATGGTCGTAGA +
Preference number: 5 (lower is better)
Translates to: NGHYEGIVHRSKPGPRPSGCPRR*RAHGRR
Trigger: TCTACGACCATGAGCACGCAACCTTCGAGGACATCC...GCTGGGGCGGGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp CCCTCGCCCCAGCTATATACACGACAGCCCATCCTGCTGGCCGTGGACAAAAGCGGATGTCCTCGAAGGTaGCGTGCTCATGGTCGTAGA +
Preference number: 5 (lower is better)
Translates to: PSPQLYTRQPILLAVDKSGCPRR*RAHGRR
Trigger: TCTACGACCATGAGCACGCAACCTTCGAGGACATCC...GCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTGTATATAGCTGGGGCGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp CCCCACCCAGAGCCTCCTCTGAAGGAGGGGACGCTGCGCCCTTCCTTCCTGCTGAAATGCTGCTTCCCTTaGAATTGTTTCGGGGGTGTA +
Preference number: 5 (lower is better)
Translates to: PHPEPPLKEGTLRPSFLLKCCFP*NCFGGV
Trigger: TACACCCCCGAAACAATTCAAAGGGAAGCAGCATTT...CAGCAGGAAGGAAGGGCGCAGCGTCCCCTCCTTCAGAGGAGGCTCTGGGTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp GCAGGAAGGCCCTGCAGCAGTGACCTCACAGGAGTGGGCCCAGAAGCTGGGCACGAAGTTCGAGATGGCTaGCATAGTTGTGGTTGCTGT +
Preference number: 5 (lower is better)
Translates to: AGRPCSSDLTGVGPEAGHEVRDG*HSCGCC
Trigger: ACAGCAACCACAACTATGCAAGCCATCTCGAACTTC...GTGCCCAGCTTCTGGGCCCACTCCTGTGAGGTCACTGCTGCAGGGCCTTCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437259.5
CDS TCA 90 bp TGTGTCTGCCCCTCCCAGGCCTGGAACCAGCAGAGAGAAGGCCAATaGGGCACATACCAAGGATGTCCTCGAAGGTTGCGTGCTCATGGT +
Preference number: 5 (lower is better)
Translates to: CVCPSQAWNQQREGQ*GTYQGCPRRLRAHG
Trigger: ACCATGAGCACGCAACCTTCGAGGACATCCTTGGTATGTGCCTCATTGGCCTTCTCTCTGCTGGTTCCAGGCCTGGGAGGGGCAGACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371468.1
CDS CCA 90 bp TCTGCCCCTCACAGGACGTCGTCAAAGTCCAGCAGCTTCGAGTGCTaGCGGCTCTTCCACAGGCGATACAACCGGAAGTCAAAGTACGTC +
Preference number: 5 (lower is better)
Translates to: SAPHRTSSKSSSFEC*RLFHRRYNRKSKYV
Trigger: GACGTACTTTGACTTCCGGTTGTATCGCCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCTGGACTTTGACGACGTCCTGTGAGGGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000371482.5
ENST00000437259.5
CDS CCA 90 bp AGGCACATACCAAGGATGTCCTCGAAGGTTGCGTGCTCATGGTCCTaGGGACAGACACAGGCCACAAGGCCACATCAAGGCTGCGTCAGA +
Preference number: 5 (lower is better)
Translates to: RHIPRMSSKVACSWS*GQTQATRPHQGCVR
Trigger: TCTGACGCAGCCTTGATGTGGCCTTGTGGCCTGTGTCTGTCCCCAGGACCATGAGCACGCAACCTTCGAGGACATCCTTGGTATGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371468.1
CDS-3UTR CAA 90 bp AGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCGGGCTGCTCGCACTTaGGCCGCCACCGAGGACATG +
Preference number: 5 (lower is better)
Translates to: RIRFNGHYEGIVHRSKPGRAART*AATEDM
Trigger: CATGTCCTCGGTGGCGGCCAAAGTGCGAGCAGCCCG...GCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp CCCTCGCCCCAGCTATATACACGACAGCCCATCCTGCTGGCCGTGGACAAAAGCTCTTCCTTCTCCACTTaGGCAAAGGTGGCCACCTTG +
Preference number: 5 (lower is better)
Translates to: PSPQLYTRQPILLAVDKSSSFST*AKVATL
Trigger: CAAGGTGGCCACCTTTGCCAAAGTGGAGAAGGAAGA...GCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTGTATATAGCTGGGGCGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp ACAAAAGCTGGGAGCTCCTGTGCCCAGTCAGGAGCCCCTACAGTCCACCAGCTGTCTTCCTTCTCCACTTaGGCAAAGGTGGCCACCTTG +
Preference number: 5 (lower is better)
Translates to: TKAGSSCAQSGAPTVHQLSSFST*AKVATL
Trigger: CAAGGTGGCCACCTTTGCCAAAGTGGAGAAGGAAGA...CAGCTGGTGGACTGTAGGGGCTCCTGACTGGGCACAGGAGCTCCCAGCTTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS CCA 90 bp GTTCCCCAGAATGTAGCAGCCCATGATGTGGATGACGTTCGGCTCTaGGTTCACTTTGCTCATCAGGCGGCTCAGCCGCTTCCAGAAGTG +
Preference number: 5 (lower is better)
Translates to: VPQNVAAHDVDDVRL*VHFAHQAAQPLPEV
Trigger: CACTTCTGGAAGCGGCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGCCGAACGTCATCCACATCATGGGCTGCTACATTCTGGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000371482.5
ENST00000437259.5
ENST00000484316.5
CDS CCA 90 bp GTTCCCCAGAATGTAGCAGCCCATGATGTGGATGACGTTCGGCTCTaGGTTCACTTTGCTCATCAGGCGGCTCAGCCGCTTCCAGAAGCT +
Preference number: 5 (lower is better)
Translates to: VPQNVAAHDVDDVRL*VHFAHQAAQPLPEA
Trigger: AGCTTCTGGAAGCGGCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGCCGAACGTCATCCACATCATGGGCTGCTACATTCTGGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482448.1
CDS-3UTR CAA 90 bp GGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCGGGCTGCTCGCACTTaGGCCGCCACCGAGGACATG +
Preference number: 5 (lower is better)
Translates to: GGGSGLMVTMRVSYIVPSRAART*AATEDM
Trigger: CATGTCCTCGGTGGCGGCCAAAGTGCGAGCAGCCCG...GCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCGGCTCTGGGTTCACTTaGCTCATCAGGCGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPGSGFT*LIRRLS
Trigger: GCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGCC...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp AGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCATCCTCTCCAGCTTCTaGCGGCGACCGGAGGTCTCA +
Preference number: 5 (lower is better)
Translates to: RIRFNGHYEGIVHRSKPGILSSF*RRPEVS
Trigger: TGAGACCTCCGGTCGCCGCAAGAAGCTGGAGAGGAT...GCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp AGGAGTGTAAGTGAAAGCACAGACAGTCGGAGACTCGGCCAGTGTAGACAGACCGGATGTCCTCGAAGGTaGCGTGCTCATGGTCGTAGA +
Preference number: 5 (lower is better)
Translates to: RSVSESTDSRRLGQCRQTGCPRR*RAHGRR
Trigger: TCTACGACCATGAGCACGCAACCTTCGAGGACATCC...GGTCTGTCTACACTGGCCGAGTCTCCGACTGTCTGTGCTTTCACTTACACTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp AGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCGGCTCTGGGTTCACTTaGCTCATCAGGCGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: RIRFNGHYEGIVHRSKPGGSGFT*LIRRLS
Trigger: GCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGCC...GCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp CGCGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAGGCTCTGGGTTCACTTaGCTCATCAGGCGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: RGGGSGLMVTMRVSYIVPGSGFT*LIRRLS
Trigger: GCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGCC...TGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp CCCTCGCCCCAGCTATATACACGACAGCCCATCCTGCTGGCCGTGGACAAAAGCCTGCTTCCCTTTGAATaGTTTCGGGGGTGTAGAAAT +
Preference number: 5 (lower is better)
Translates to: PSPQLYTRQPILLAVDKSLLPFE*FRGCRN
Trigger: ATTTCTACACCCCCGAAACAATTCAAAGGGAAGCAG...GCTTTTGTCCACGGCCAGCAGGATGGGCTGTCGTGTATATAGCTGGGGCGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp TGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCATCCTCTCCAGCTTCTaGCGGCGACCGGAGGTCTCA +
Preference number: 5 (lower is better)
Translates to: WRIRFNGHYEGIVHRSKPILSSF*RRPEVS
Trigger: TGAGACCTCCGGTCGCCGCAAGAAGCTGGAGAGGAT...GGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp GGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCGCCCCTGAACACCGCTaGCATAGTTGTGGTTGCTGT +
Preference number: 5 (lower is better)
Translates to: GSGLMVTMRVSYIVPSPAAPEHR*HSCGCC
Trigger: ACAGCAACCACAACTATGCAAGCGGTGTTCAGGGGC...GGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265663.12
ENST00000371472.6
CDS-3UTR CAA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCGCCCCTGAACACCGCTaGCATAGTTGTGGTTGCTGT +
Preference number: 5 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPAPEHR*HSCGCC
Trigger: ACAGCAACCACAACTATGCAAGCGGTGTTCAGGGGC...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265663.12
ENST00000371472.6
CDS-3UTR CAA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCGGGATGTACTCAGCCTaGGGCACCTTGGAGGAAATG +
Preference number: 5 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPGMYSA*GTLEEM
Trigger: CATTTCCTCCAAGGTGCCCAAGGCTGAGTACATCCC...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS TCA 90 bp TGTCCTCTTCCTTCTCCACTTTGGCAAAGGTGGCCACCTTGTTCTTaGGGAGATAGAGGTGTCCAGGACCTCCCTGGCAGAAAATCAGCA +
Preference number: 5 (lower is better)
Translates to: CPLPSPLWQRWPPCS*GDRGVQDLPGRKSA
Trigger: TGCTGATTTTCTGCCAGGGAGGTCCTGGACACCTCTATCTCCTCAAGAACAAGGTGGCCACCTTTGCCAAAGTGGAGAAGGAAGAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000371482.5
ENST00000437259.5
ENST00000482448.1
ENST00000484316.5
CDS-3UTR CAA 90 bp ATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCCCCACCATGCGCAGGTGTTaGCGGAAGTTCCTCTGGATT +
Preference number: 5 (lower is better)
Translates to: IRFNGHYEGIVHRSKPGPTMRRC*RKFLWI
Trigger: AATCCAGAGGAACTTCCGCAAACACCTGCGCATGGT...GGGGCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371475.9
CDS-3UTR CAA 90 bp GGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGTCAGCCTTGGGCACCTaGGAGGAAATGAGCATGACC +
Preference number: 5 (lower is better)
Translates to: GGSGLMVTMRVSYIVPSPSALGT*EEMSMT
Trigger: GGTCATGCTCATTTCCTCCAAGGTGCCCAAGGCTGA...CGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp AGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCGGGATGTACTCAGCCTaGGGCACCTTGGAGGAAATG +
Preference number: 5 (lower is better)
Translates to: RIRFNGHYEGIVHRSKPGGMYSA*GTLEEM
Trigger: CATTTCCTCCAAGGTGCCCAAGGCTGAGTACATCCC...GCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp CGCGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAGGGATGTACTCAGCCTaGGGCACCTTGGAGGAAATG +
Preference number: 5 (lower is better)
Translates to: RGGGSGLMVTMRVSYIVPGMYSA*GTLEEM
Trigger: CATTTCCTCCAAGGTGCCCAAGGCTGAGTACATCCC...TGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp AGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGCGGATGTCCTCGAAGGTaGCGTGCTCATGGTCGTAGA +
Preference number: 5 (lower is better)
Translates to: RIRFNGHYEGIVHRSKPGGCPRR*RAHGRR
Trigger: TCTACGACCATGAGCACGCAACCTTCGAGGACATCC...GCCGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp GGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGGATGTCCTCGAAGGTaGCGTGCTCATGGTCGTAGA +
Preference number: 5 (lower is better)
Translates to: GGSGLMVTMRVSYIVPSPGCPRR*RAHGRR
Trigger: TCTACGACCATGAGCACGCAACCTTCGAGGACATCC...CGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS CCA 90 bp GGTGTCCAGGACCTCCCTGGCAGAAAATCAGCATTTTCCAGATCTTaGCTCCCTTGTGGTAGACGTTCAGCTTCCTCTCTATCTCCTCAA +
Preference number: 5 (lower is better)
Translates to: GVQDLPGRKSAFSRS*LPCGRRSASSLSPQ
Trigger: TTGAGGAGATAGAGAGGAAGCTGAACGTCTACCACAAGGGAGCCAAGATCTGGAAAATGCTGATTTTCTGCCAGGGAGGTCCTGGACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000371482.5
ENST00000437259.5
ENST00000482448.1
ENST00000484316.5
CDS-3UTR CAA 90 bp GGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGACCATGCGCAGGTGTTaGCGGAAGTTCCTCTGGATT +
Preference number: 5 (lower is better)
Translates to: GGSGLMVTMRVSYIVPSPTMRRC*RKFLWI
Trigger: AATCCAGAGGAACTTCCGCAAACACCTGCGCATGGT...CGGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371475.9
CDS-3UTR CAA 90 bp TGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGGATGTACTCAGCCTaGGGCACCTTGGAGGAAATG +
Preference number: 5 (lower is better)
Translates to: WRIRFNGHYEGIVHRSKPGMYSA*GTLEEM
Trigger: CATTTCCTCCAAGGTGCCCAAGGCTGAGTACATCCC...GGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp TGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCGGATGTCCTCGAAGGTaGCGTGCTCATGGTCGTAGA +
Preference number: 5 (lower is better)
Translates to: WRIRFNGHYEGIVHRSKPGCPRR*RAHGRR
Trigger: TCTACGACCATGAGCACGCAACCTTCGAGGACATCC...GGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp CGCGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCATCTTCCTTCTCCACTTaGGCAAAGGTGGCCACCTTG +
Preference number: 5 (lower is better)
Translates to: RGGGSGLMVTMRVSYIVPSSFST*AKVATL
Trigger: CAAGGTGGCCACCTTTGCCAAAGTGGAGAAGGAAGA...TGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp TGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCCCACCATGCGCAGGTGTTaGCGGAAGTTCGAGATGGCT +
Preference number: 5 (lower is better)
Translates to: WRIRFNGHYEGIVHRSKPTMRRC*RKFEMA
Trigger: AGCCATCTCGAACTTCCGCAAACACCTGCGCATGGT...GGGCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437259.5
CDS-3UTR CAA 90 bp GGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGCTCTTCCTTCTCCACTTaGGCAAAGGTGGCCACCTTG +
Preference number: 5 (lower is better)
Translates to: GGGSGLMVTMRVSYIVPSSSFST*AKVATL
Trigger: CAAGGTGGCCACCTTTGCCAAAGTGGAGAAGGAAGA...GCTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp AGGAGTGTAAGTGAAAGCACAGACAGTCGGAGACTCGGCCAGTGTAGACAGACCAAATGCTGCTTCCCTTaGAATTGTTTCGGGGGTGTA +
Preference number: 5 (lower is better)
Translates to: RSVSESTDSRRLGQCRQTKCCFP*NCFGGV
Trigger: TACACCCCCGAAACAATTCAAAGGGAAGCAGCATTT...GGTCTGTCTACACTGGCCGAGTCTCCGACTGTCTGTGCTTTCACTTACACTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp TGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAGTCTTCCTTCTCCACTTaGGCAAAGGTGGCCACCTTG +
Preference number: 5 (lower is better)
Translates to: CRNCTYFYEPHGGMPTAESSFST*AKVATL
Trigger: CAAGGTGGCCACCTTTGCCAAAGTGGAGAAGGAAGA...CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp CGCGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCACTGCTTCCCTTTGAATaGTTTCGGGGGTGTAGAAAT +
Preference number: 5 (lower is better)
Translates to: RGGGSGLMVTMRVSYIVPLLPFE*FRGCRN
Trigger: ATTTCTACACCCCCGAAACAATTCAAAGGGAAGCAG...TGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp TGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAGGAACACCGAGATGGCTaGCATAGTTGTGGTTGCTGT +
Preference number: 5 (lower is better)
Translates to: CRNCTYFYEPHGGMPTAEEHRDG*HSCGCC
Trigger: ACAGCAACCACAACTATGCAAGCCATCTCGGTGTTC...CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371473.7
ENST00000371475.9
CDS-3UTR CAA 90 bp CGGTGGAGGATCAGGTTTAATGGTCACTATGAGGGTATCGTACATCGTTCCAAGAAATGCTGCTTCCCTTaGAATTGTTTCGGGGGTGTA +
Preference number: 5 (lower is better)
Translates to: RWRIRFNGHYEGIVHRSKKCCFP*NCFGGV
Trigger: TACACCCCCGAAACAATTCAAAGGGAAGCAGCATTT...CTTGGAACGATGTACGATACCCTCATAGTGACCATTAAACCTGATCCTCCACCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS-3UTR CAA 90 bp TGTAGAAATTGCACTTATTTCTATGAACCCCATGGAGGGATGCCCACAGCTGAGAAATGCTGCTTCCCTTaGAATTGTTTCGGGGGTGTA +
Preference number: 5 (lower is better)
Translates to: CRNCTYFYEPHGGMPTAEKCCFP*NCFGGV
Trigger: TACACCCCCGAAACAATTCAAAGGGAAGCAGCATTT...CTCAGCTGTGGGCATCCCTCCATGGGGTTCATAGAAATAAGTGCAATTTCTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS CAA 72 bp GGGCGGGCACCGCAGCCCCCTGCCCCTGAGGGCCTCTaGCGAGTGGCGGTGGGCACGGCCCTACAGGCGCCC +
Preference number: 6 (lower is better)
Translates to: GRAPQPPAPEGL*RVAVGTALQAP
Trigger: GGGCGCCTGTAGGGCCGTGCCCACCGCCACTCGCAAGAGGCCCTCAGGGGCAGGGGGCTGCGGTGCCCGCCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371482.5
CDS CCA 72 bp TCCTCAGCGCCCTCCTCCTGGAGGCGGCGGCGCCCATaGTCGAGGCGGCGGCGCATCCCCCGGGCCTCAGAG +
Preference number: 6 (lower is better)
Translates to: SSAPSSWRRRRP*SRRRRIPRASE
Trigger: CTCTGAGGCCCGGGGGATGCGCCGCCGCCTCGACCATGGGCGCCGCCGCCTCCAGGAGGAGGGCGCTGAGGA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS CCA 72 bp TGCAGGCATCAGCTCCAGCCAAGTCCGCCGGGCGCCTaGGAGGGAGTGGGGGCGGGCACCGCAGCCCCCTGC +
Preference number: 6 (lower is better)
Translates to: CRHQLQPSPPGA*EGVGAGTAAPC
Trigger: GCAGGGGGCTGCGGTGCCCGCCCCCACTCCCTCCCAGGCGCCCGGCGGACTTGGCTGGAGCTGATGCCTGCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371482.5
CDS CCA 72 bp GAGGCGGCCCAGCCCCAGGTCCCGGTGCAGAGGGAGTaGCCTGATGGTGACTGGGCGGAGGCCTCTGCCCCT +
Preference number: 6 (lower is better)
Translates to: EAAQPQVPVQRE*PDGDWAEASAP
Trigger: AGGGGCAGAGGCCTCCGCCCAGTCACCATCAGGCCACTCCCTCTGCACCGGGACCTGGGGCTGGGCCGCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000371482.5
ENST00000437259.5
CDS GCA 72 bp AAGGGAGACCCTGGTGCGAGGCCGGTGGAAGGCGCGTaGAGGCATCAGCTCCAGCCAAGTCCGCCGGGCGCC +
Preference number: 6 (lower is better)
Translates to: KGDPGARPVEGA*RHQLQPSPPGA
Trigger: GGCGCCCGGCGGACTTGGCTGGAGCTGATGCCTGCACGCGCCTTCCACCGGCCTCGCACCAGGGTCTCCCTT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371482.5
CDS GCA 72 bp GGCAGAGCTGGCTGGACTCGGGTTGGGGCGGAGTCCTaGTCGGGGTGTAGAGGAGCACTGCCCGGGCTGGGC +
Preference number: 6 (lower is better)
Translates to: GRAGWTRVGAES*SGCRGALPGLG
Trigger: GCCCAGCCCGGGCAGTGCTCCTCTACACCCCGAGCAGGACTCCGCCCCAACCCGAGTCCAGCCAGCTCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371482.5
ENST00000484316.5
CDS CCA 72 bp CTCGGGCTGCTCGCACTTTGGCCGCCACCGAGGACATaGCCTCGCTCCTCAGCGCCCTCCTCCTGGAGGCGG +
Preference number: 6 (lower is better)
Translates to: LGLLALWPPPRT*PRSSAPSSWRR
Trigger: CCGCCTCCAGGAGGAGGGCGCTGAGGAGCGAGGCCATGTCCTCGGTGGCGGCCAAAGTGCGAGCAGCCCGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS CCA 72 bp CAGCCGTTGGAGACGAGGGACAGGCGGCGCTTGTTCTaGGGGGCCGGCTGCATCTCGGGGGACCCGTCGTGG +
Preference number: 6 (lower is better)
Translates to: QPLETRDRRRLF*GAGCISGDPSW
Trigger: CCACGACGGGTCCCCCGAGATGCAGCCGGCCCCCCAGAACAAGCGCCGCCTGTCCCTCGTCTCCAACGGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS TCA 72 bp CGGCTTTCATGGGGGTGGGGTCGCTCCAGGACCGGCTaGAGCTCCGCTCGCGCCGCTCAGCGAACGTCTGGG +
Preference number: 6 (lower is better)
Translates to: RLSWGWGRSRTG*SSARAAQRTSG
Trigger: CCCAGACGTTCGCTGAGCGGCGCGAGCGGAGCTTCAGCCGGTCCTGGAGCGACCCCACCCCCATGAAAGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000265663.12
ENST00000371468.1
ENST00000371472.6
ENST00000371474.7
ENST00000371475.9
ENST00000371482.5
ENST00000437259.5
ENST00000484316.5
CDS CAA 72 bp CCCTACAGGCGCCCCCGGCCAGCACTGCCGCGGCCGTaGTTAGCCCCGCCTTTGCGATCGGAGATGCTGAGG +
Preference number: 6 (lower is better)
Translates to: PYRRPRPALPRP*LAPPLRSEMLR
Trigger: CCTCAGCATCTCCGATCGCAAAGGCGGGGCTAACAACGGCCGCGGCAGTGCTGGCCGGGGGCGCCTGTAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371482.5
CDS GCA 72 bp CTGGGCAGCGGCCTGATGTGGGAAGGGAGACCCTGGTaGGAGGCCGGTGGAAGGCGCGTGCAGGCATCAGCT +
Preference number: 6 (lower is better)
Translates to: LGSGLMWEGRPW*EAGGRRVQASA
Trigger: AGCTGATGCCTGCACGCGCCTTCCACCGGCCTCGCACCAGGGTCTCCCTTCCCACATCAGGCCGCTGCCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371482.5
CDS CCA 72 bp CAGGTCCCGGTGCAGAGGGAGTGGCCTGATGGTGACTaGGCGGAGGCCTCTGCCCCTCACAGGACGTCGTCA +
Preference number: 6 (lower is better)
Translates to: QVPVQREWPDGD*AEASAPHRTSS
Trigger: TGACGACGTCCTGTGAGGGGCAGAGGCCTCCGCCCAGTCACCATCAGGCCACTCCCTCTGCACCGGGACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000371482.5
ENST00000437259.5
CDS CCA 72 bp CCCGAAAGCCCCATCCCGGAGGGTCCTCCAAGCAAGTaGGAGGACCATACAGAGGTCGCCGCCAGCCCGGCA +
Preference number: 6 (lower is better)
Translates to: PESPIPEGPPSK*EDHTEVAASPA
Trigger: TGCCGGGCTGGCGGCGACCTCTGTATGGTCCTCCCACTTGCTTGGAGGACCCTCCGGGATGGGGCTTTCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371482.5
CDS CAA 72 bp CGGCCAGCACTGCCGCGGCCGTTGTTAGCCCCGCCTTaGCGATCGGAGATGCTGAGGGCGTCCCCATCTCAC +
Preference number: 6 (lower is better)
Translates to: RPALPRPLLAPP*RSEMLRASPSH
Trigger: GTGAGATGGGGACGCCCTCAGCATCTCCGATCGCAAAGGCGGGGCTAACAACGGCCGCGGCAGTGCTGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371482.5
CDS TCA 72 bp AGGGCAGGCTCCCCAGAGATGGTGTACACTCGAGGCTaGGGGCCCTCGCCTGCGGGCTTCCTAATGCTGGGC +
Preference number: 6 (lower is better)
Translates to: RAGSPEMVYTRG*GPSPAGFLMLG
Trigger: GCCCAGCATTAGGAAGCCCGCAGGCGAGGGCCCTCAGCCTCGAGTGTACACCATCTCTGGGGAGCCTGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS GCA 72 bp GCCGCTCAGCGAACGTCTGGGCCTTCACCCTCCGGCTaGCGACCATGCGCAGGTGTTTGCGGAAGTTCCCCT +
Preference number: 6 (lower is better)
Translates to: AAQRTSGPSPSG*RPCAGVCGSSP
Trigger: AGGGGAACTTCCGCAAACACCTGCGCATGGTCGGCAGCCGGAGGGTGAAGGCCCAGACGTTCGCTGAGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371482.5
CDS GCA 72 bp GCCGCTCAGCGAACGTCTGGGCCTTCACCCTCCGGCTaGCGACCATGCGCAGGTGTTTGCGGAAGTTCCTGG +
Preference number: 6 (lower is better)
Translates to: AAQRTSGPSPSG*RPCAGVCGSSW
Trigger: CCAGGAACTTCCGCAAACACCTGCGCATGGTCGGCAGCCGGAGGGTGAAGGCCCAGACGTTCGCTGAGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371468.1
CDS GCA 72 bp TCCTCGAAGGCCTCGTCCAGCGTGCAGTGGGAGCTCTaGAGGTCACTGCTCTGGGCCTTCACCCTCCGGCTG +
Preference number: 6 (lower is better)
Translates to: SSKASSSVQWEL*RSLLWAFTLRL
Trigger: CAGCCGGAGGGTGAAGGCCCAGAGCAGTGACCTGCAGAGCTCCCACTGCACGCTGGACGAGGCCTTCGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371473.7
CDS CCA 72 bp AGGAGCACTGCCCGGGCTGGGCCTCACCATGACCTTTaGTGGCACGAAGCCTTCGGTGTCGCAGGCCACAGC +
Preference number: 6 (lower is better)
Translates to: RSTARAGPHHDL*WHEAFGVAGHS
Trigger: GCTGTGGCCTGCGACACCGAAGGCTTCGTGCCACCAAAGGTCATGGTGAGGCCCAGCCCGGGCAGTGCTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371482.5
ENST00000484316.5
CDS GCA 72 bp GCCGCTCAGCGAACGTCTGGGCCTTCACCCTCCGGCTaGCGACCATGCGCAGGTGTTTGCGGAAGTTCCTCT +
Preference number: 6 (lower is better)
Translates to: AAQRTSGPSPSG*RPCAGVCGSSS
Trigger: AGAGGAACTTCCGCAAACACCTGCGCATGGTCGGCAGCCGGAGGGTGAAGGCCCAGACGTTCGCTGAGCGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371475.9
CDS GCA 72 bp CGAACGTCTGGGCCTTCACCCTCCGGCTGCCGACCATaGGCAGGTGTTTGCGGAAGTTCCCCTTCGGTGTGG +
Preference number: 6 (lower is better)
Translates to: RTSGPSPSGCRP*AGVCGSSPSVW
Trigger: CCACACCGAAGGGGAACTTCCGCAAACACCTGCGCATGGTCGGCAGCCGGAGGGTGAAGGCCCAGACGTTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371482.5
CDS GCA 72 bp GGGGCTGTGGGAGCCCCCATGAGGCTACCTTCTGGCTaGCAGGCAGCCCAAGGGTATAGCCCTGTGAGACAC +
Preference number: 6 (lower is better)
Translates to: GAVGAPMRLPSG*QAAQGYSPVRH
Trigger: GTGTCTCACAGGGCTATACCCTTGGGCTGCCTGGCAGCCAGAAGGTAGCCTCATGGGGGCTCCCACAGCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371482.5
ENST00000484316.5
CDS GCA 72 bp GCCGCTCAGCGAACGTCTGGGCCTTCACCCTCCGGCTaGCGACCATGCGCAGGTGTTTGCGGAAGTTCGCTT +
Preference number: 6 (lower is better)
Translates to: AAQRTSGPSPSG*RPCAGVCGSSL
Trigger: AAGCGAACTTCCGCAAACACCTGCGCATGGTCGGCAGCCGGAGGGTGAAGGCCCAGACGTTCGCTGAGCGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371474.7
CDS GCA 72 bp GCCGCTCAGCGAACGTCTGGGCCTTCACCCTCCGGCTaGCGACCATGCGCAGGTGTTTGCGGAAGTTCGAGA +
Preference number: 6 (lower is better)
Translates to: AAQRTSGPSPSG*RPCAGVCGSSR
Trigger: TCTCGAACTTCCGCAAACACCTGCGCATGGTCGGCAGCCGGAGGGTGAAGGCCCAGACGTTCGCTGAGCGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437259.5
CDS CCA 72 bp CAGTCCAGGTCCTCGAAGGCCTCGTCCAGCGTGCAGTaGGAGCTCTGCAGGTCACTGCTGTCTCGGGAGTCG +
Preference number: 6 (lower is better)
Translates to: QSRSSKASSSVQ*ELCRSLLSRES
Trigger: CGACTCCCGAGACAGCAGTGACCTGCAGAGCTCCCACTGCACGCTGGACGAGGCCTTCGAGGACCTGGACTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265663.12
ENST00000371468.1
ENST00000371472.6
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
ENST00000484316.5
CDS CCA 72 bp CAGTCCAGGTCCTCGAAGGCCTCGTCCAGCGTGCAGTaGGAGCTCTGCAGGTCACTGCTCTGGGCCTTCACC +
Preference number: 6 (lower is better)
Translates to: QSRSSKASSSVQ*ELCRSLLWAFT
Trigger: GGTGAAGGCCCAGAGCAGTGACCTGCAGAGCTCCCACTGCACGCTGGACGAGGCCTTCGAGGACCTGGACTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371473.7
CDS CCA 72 bp CTTTGCTCATCAGGCGGCTCAGCCGCTTCCAGAAGCTaGTGGAGAGGGGTGGGTCACCCAGTGGCAGGGGAC +
Preference number: 6 (lower is better)
Translates to: LCSSGGSAASRS*WRGVGHPVAGD
Trigger: GTCCCCTGCCACTGGGTGACCCACCCCTCTCCACCAGCTTCTGGAAGCGGCTGAGCCGCCTGATGAGCAAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482448.1
CDS CCA 72 bp CAGTCCAGGTCCTCGAAGGCCTCGTCCAGCGTGCAGTaGGAGCTCTGCAGGTCACTGCCTGGGAAGCAAGAG +
Preference number: 6 (lower is better)
Translates to: QSRSSKASSSVQ*ELCRSLPGKQE
Trigger: CTCTTGCTTCCCAGGCAGTGACCTGCAGAGCTCCCACTGCACGCTGGACGAGGCCTTCGAGGACCTGGACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371482.5
CDS GCA 72 bp TCTGCAGGTCACTGCTCTGGGCCTTCACCCTCCGGCTaGCGACCATGCGCAGGTGTTTGCGGAAGTTCCTCT +
Preference number: 6 (lower is better)
Translates to: SAGHCSGPSPSG*RPCAGVCGSSS
Trigger: AGAGGAACTTCCGCAAACACCTGCGCATGGTCGGCAGCCGGAGGGTGAAGGCCCAGAGCAGTGACCTGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371473.7
CDS GCA 72 bp CGAACGTCTGGGCCTTCACCCTCCGGCTGCCGACCATaGGCAGGTGTTTGCGGAAGTTCGAGATGGCTTGCA +
Preference number: 6 (lower is better)
Translates to: RTSGPSPSGCRP*AGVCGSSRWLA
Trigger: TGCAAGCCATCTCGAACTTCCGCAAACACCTGCGCATGGTCGGCAGCCGGAGGGTGAAGGCCCAGACGTTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437259.5
CDS CAA 72 bp GACACACGGTCAACGCTGTACATCCTCTCCAGCTTCTaGCGGCGACCGGAGGTCTCAGGCAGAGGTGGCTGG +
Preference number: 6 (lower is better)
Translates to: DTRSTLYILSSF*RRPEVSGRGGW
Trigger: CCAGCCACCTCTGCCTGAGACCTCCGGTCGCCGCAAGAAGCTGGAGAGGATGTACAGCGTTGACCGTGTGTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS CAA 90 bp ATGTCGTCAGACACACGGTCAACGCTGTACATCCTCTCCAGCTTCTaGCGGCGACCGGAGGTCTCAGGCAGAGGTGGCTGGTCCAGCCCA +
Preference number: 6 (lower is better)
Translates to: MSSDTRSTLYILSSF*RRPEVSGRGGWSSP
Trigger: TGGGCTGGACCAGCCACCTCTGCCTGAGACCTCCGGTCGCCGCAAGAAGCTGGAGAGGATGTACAGCGTTGACCGTGTGTCTGACGACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS GCA 72 bp ACACACGGTCAACGCTGTACATCCTCTCCAGCTTCTTaGGGCGACCGGAGGTCTCAGGCAGAGGTGGCTGGT +
Preference number: 6 (lower is better)
Translates to: THGQRCTSSPAS*GDRRSQAEVAG
Trigger: ACCAGCCACCTCTGCCTGAGACCTCCGGTCGCCGCAAGAAGCTGGAGAGGATGTACAGCGTTGACCGTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
CDS GCA 72 bp CGAACGTCTGGGCCTTCACCCTCCGGCTGCCGACCATaGGCAGGTGTTTGCGGAAGTTCCTCTGGATTACAG +
Preference number: 6 (lower is better)
Translates to: RTSGPSPSGCRP*AGVCGSSSGLQ
Trigger: CTGTAATCCAGAGGAACTTCCGCAAACACCTGCGCATGGTCGGCAGCCGGAGGGTGAAGGCCCAGACGTTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371475.9
CDS GCA 72 bp ATGTACTCAGCCTTGGGCACCTTGGAGGAAATGAGCTaGGGAGACAAAGAGCTGCTCAGGGGCCCCAGGCCC +
Preference number: 6 (lower is better)
Translates to: MYSALGTLEEMS*GDKELLRGPRP
Trigger: GGGCCTGGGGCCCCTGAGCAGCTCTTTGTCTCCGCAGCTCATTTCCTCCAAGGTGCCCAAGGCTGAGTACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371482.5
ENST00000484316.5
CDS GCA 72 bp CACTGCTCTGGGCCTTCACCCTCCGGCTGCCGACCATaGGCAGGTGTTTGCGGAAGTTCCTCTGGATTACAG +
Preference number: 6 (lower is better)
Translates to: HCSGPSPSGCRP*AGVCGSSSGLQ
Trigger: CTGTAATCCAGAGGAACTTCCGCAAACACCTGCGCATGGTCGGCAGCCGGAGGGTGAAGGCCCAGAGCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371473.7
CDS CAA 90 bp TCATCCCGGCGGATGATAGTGGGGATGTACTCAGCCTTGGGCACCTaGGAGGAAATGAGCTGCGGAGACAAAGAGCTGCTCAGGGGCCCC +
Preference number: 6 (lower is better)
Translates to: SSRRMIVGMYSALGT*EEMSCGDKELLRGP
Trigger: GGGGCCCCTGAGCAGCTCTTTGTCTCCGCAGCTCATTTCCTCCAAGGTGCCCAAGGCTGAGTACATCCCCACTATCATCCGCCGGGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371482.5
ENST00000484316.5
CDS GCA 72 bp CCTCACAGGACGTCGTCAAAGTCCAGCAGCTTCGAGTaGTGGCGGCTCTTCCACAGGCGATACAACCGGAAG +
Preference number: 6 (lower is better)
Translates to: PHRTSSKSSSFE*WRLFHRRYNRK
Trigger: CTTCCGGTTGTATCGCCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCTGGACTTTGACGACGTCCTGTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000371482.5
ENST00000437259.5
CDS CCA 72 bp CCAAGGATGTCCTCGAAGGTTGCGTGCTCATGGTCCTaGGGACAGACACAGGCCACAAGGCCACATCAAGGC +
Preference number: 6 (lower is better)
Translates to: PRMSSKVACSWS*GQTQATRPHQG
Trigger: GCCTTGATGTGGCCTTGTGGCCTGTGTCTGTCCCCAGGACCATGAGCACGCAACCTTCGAGGACATCCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371468.1
CDS CAA 90 bp ATGGAGGGGTCATCCCGGCGGATGATAGTGGGGATGTACTCAGCCTaGGGCACCTTGGAGGAAATGAGCTGCGGAGACAAAGAGCTGCTC +
Preference number: 6 (lower is better)
Translates to: MEGSSRRMIVGMYSA*GTLEEMSCGDKELL
Trigger: GAGCAGCTCTTTGTCTCCGCAGCTCATTTCCTCCAAGGTGCCCAAGGCTGAGTACATCCCCACTATCATCCGCCGGGATGACCCCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371482.5
ENST00000484316.5
CDS GCA 72 bp GCCAATGAGGCACATACCAAGGATGTCCTCGAAGGTTaGGTGCTCATGGTCCTGGGGACAGACACAGGCCAC +
Preference number: 6 (lower is better)
Translates to: ANEAHTKDVLEG*VLMVLGTDTGH
Trigger: GTGGCCTGTGTCTGTCCCCAGGACCATGAGCACGCAACCTTCGAGGACATCCTTGGTATGTGCCTCATTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371468.1
CDS CCA 72 bp CACAGGACGTCGTCAAAGTCCAGCAGCTTCGAGTGCTaGCGGCTCTTCCACAGGCGATACAACCGGAAGTCA +
Preference number: 6 (lower is better)
Translates to: HRTSSKSSSFEC*RLFHRRYNRKS
Trigger: TGACTTCCGGTTGTATCGCCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCTGGACTTTGACGACGTCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000371482.5
ENST00000437259.5
CDS CAA 72 bp GCCTTCACCCTCCGGCTGCCGACCATGCGCAGGTGTTaGCGGAAGTTCGAGATGGCTTGCATAGTTGTGGTT +
Preference number: 6 (lower is better)
Translates to: AFTLRLPTMRRC*RKFEMACIVVV
Trigger: AACCACAACTATGCAAGCCATCTCGAACTTCCGCAAACACCTGCGCATGGTCGGCAGCCGGAGGGTGAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437259.5
CDS CAA 72 bp CCCATGATGTGGATGACGTTCGGCTCTGGGTTCACTTaGCTCATCAGGCGGCTCAGCCGCTTCCAGAAGCTG +
Preference number: 6 (lower is better)
Translates to: PMMWMTFGSGFT*LIRRLSRFQKL
Trigger: CAGCTTCTGGAAGCGGCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGCCGAACGTCATCCACATCATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482448.1
CDS CAA 90 bp ATGGAGGGGTCATCCCGGCGGATGATAGTGGGGATGTACTCAGCCTaGGGCACCTTGGAGGAAATGAGCATGACCTTTGGTGGCACGAAG +
Preference number: 6 (lower is better)
Translates to: MEGSSRRMIVGMYSA*GTLEEMSMTFGGTK
Trigger: CTTCGTGCCACCAAAGGTCATGCTCATTTCCTCCAAGGTGCCCAAGGCTGAGTACATCCCCACTATCATCCGCCGGGATGACCCCTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000265663.12
ENST00000371468.1
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
ENST00000482448.1
CDS CCA 72 bp AATGTAGCAGCCCATGATGTGGATGACGTTCGGCTCTaGGTTCACTTTGCTCATCAGGCGGCTCAGCCGCTT +
Preference number: 6 (lower is better)
Translates to: NVAAHDVDDVRL*VHFAHQAAQPL
Trigger: AAGCGGCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGCCGAACGTCATCCACATCATGGGCTGCTACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000371482.5
ENST00000437259.5
ENST00000482448.1
ENST00000484316.5
CDS CAA 72 bp CGGATGATAGTGGGGATGTACTCAGCCTTGGGCACCTaGGAGGAAATGAGCTGCGGAGACAAAGAGCTGCTC +
Preference number: 6 (lower is better)
Translates to: RMIVGMYSALGT*EEMSCGDKELL
Trigger: GAGCAGCTCTTTGTCTCCGCAGCTCATTTCCTCCAAGGTGCCCAAGGCTGAGTACATCCCCACTATCATCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371482.5
ENST00000484316.5
CDS CAA 72 bp TCATCCCGGCGGATGATAGTGGGGATGTACTCAGCCTaGGGCACCTTGGAGGAAATGAGCTGCGGAGACAAA +
Preference number: 6 (lower is better)
Translates to: SSRRMIVGMYSA*GTLEEMSCGDK
Trigger: TTTGTCTCCGCAGCTCATTTCCTCCAAGGTGCCCAAGGCTGAGTACATCCCCACTATCATCCGCCGGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371482.5
ENST00000484316.5
CDS CAA 72 bp CGGATGATAGTGGGGATGTACTCAGCCTTGGGCACCTaGGAGGAAATGAGCATGACCTTTGGTGGCACGAAG +
Preference number: 6 (lower is better)
Translates to: RMIVGMYSALGT*EEMSMTFGGTK
Trigger: CTTCGTGCCACCAAAGGTCATGCTCATTTCCTCCAAGGTGCCCAAGGCTGAGTACATCCCCACTATCATCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265663.12
ENST00000371468.1
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
ENST00000482448.1
CDS CAA 72 bp TCATCCCGGCGGATGATAGTGGGGATGTACTCAGCCTaGGGCACCTTGGAGGAAATGAGCATGACCTTTGGT +
Preference number: 6 (lower is better)
Translates to: SSRRMIVGMYSA*GTLEEMSMTFG
Trigger: ACCAAAGGTCATGCTCATTTCCTCCAAGGTGCCCAAGGCTGAGTACATCCCCACTATCATCCGCCGGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265663.12
ENST00000371468.1
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000437259.5
ENST00000482448.1
CDS GCA 72 bp CTTCCTCTCTATCTCCTCAAGGATGTCCTCGAAGGTTaGGTGCTCATGGTCGTAGAGGATGGGGATGATGGA +
Preference number: 6 (lower is better)
Translates to: LPLYLLKDVLEG*VLMVVEDGDDG
Trigger: TCCATCATCCCCATCCTCTACGACCATGAGCACGCAACCTTCGAGGACATCCTTGAGGAGATAGAGAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000371482.5
ENST00000437259.5
ENST00000482448.1
ENST00000484316.5
CDS CCA 72 bp GACCTCCCTGGCAGAAAATCAGCATTTTCCAGATCTTaGCTCCCTTGTGGTAGACGTTCAGCTTCCTCTCTA +
Preference number: 6 (lower is better)
Translates to: DLPGRKSAFSRS*LPCGRRSASSL
Trigger: TAGAGAGGAAGCTGAACGTCTACCACAAGGGAGCCAAGATCTGGAAAATGCTGATTTTCTGCCAGGGAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000265663.12
ENST00000371472.6
ENST00000371473.7
ENST00000371474.7
ENST00000371475.9
ENST00000371482.5
ENST00000437259.5
ENST00000482448.1
ENST00000484316.5