Pregenerated sensors for NSMCE4A (Homo sapiens)
Ensembl gene IDs: ENSG00000107672Ensembl transcript IDs: ENST00000369017.5, ENST00000369023.8, ENST00000464321.5, ENST00000465189.1, ENST00000468209.5, ENST00000472431.1, ENST00000477289.1, ENST00000481320.5, ENST00000489266.5
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTCACACCAGATGTGGTGGCGCGTaGGCCTGTAATCCCAGCTAC | + |
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Preference number: 2 (lower is better) Translates to: RVKCYKELNHPAGHGTHTRCGGA*ACNPSY Trigger: GTAGCTGGGATTACAGGCGCACGCGCCACCACATCT...GGTGTGAGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| 3UTR-3UTR TCA 90 bp | ACAAGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTCACTGCTGGCAGATCACCTaGGGTCAGGGGTTCAAGACT | + |
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Preference number: 2 (lower is better) Translates to: TRVKCYKELNHPAGHGTHCWQIT*GQGFKT Trigger: AGTCTTGAACCCCTGACCTCAGGTGATCTGCCAGCA...GTGAGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| 3UTR-3UTR CCA 90 bp | TATACAAGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTGGTTCAAGACTAGCTTaGCCAACATGGCGAAACAAT | + |
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Preference number: 2 (lower is better) Translates to: YTRVKCYKELNHPAGHGTGSRLA*PTWRNN Trigger: ATTGTTTCGCCATGTTGGCCAAGCTAGTCTTGAACC...AGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCTTGTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| 3UTR-3UTR CAA 90 bp | ACAAGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTCACGGGTTCAAGACTAGCTaGGCCAACATGGCGAAACAA | + |
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Preference number: 3 (lower is better) Translates to: TRVKCYKELNHPAGHGTHGFKTS*ANMAKQ Trigger: TTGTTTCGCCATGTTGGCCAAGCTAGTCTTGAACCC...GTGAGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| CDS-3UTR CCA 90 bp | ACAAGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTCACAGCCGCGGCGGGACCTaGGCGACAAAGGGGACCGCG | + |
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Preference number: 4 (lower is better) Translates to: TRVKCYKELNHPAGHGTHSRGGT*ATKGTA Trigger: CGCGGTCCCCTTTGTCGCCCAGGTCCCGCCGCGGCT...GTGAGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| CDS-3UTR CCA 90 bp | TATACAAGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTCAGGCTCGGGCGCTCTaGGGCCTCTCTGCGCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: YTRVKCYKELNHPAGHGTQARAL*GLSALP Trigger: CGGGAGCGCAGAGAGGCCCCAGAGCGCCCGAGCCTG...AGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCTTGTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| CDS-3UTR CCA 90 bp | ACAAGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTCACCCTCCGCCTCCAAGCTaGCCGGGTCCATCATCTCGT | + |
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Preference number: 4 (lower is better) Translates to: TRVKCYKELNHPAGHGTHPPPPS*PGPSSR Trigger: ACGAGATGATGGACCCGGCCAGCTTGGAGGCGGAGG...GTGAGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| CDS-3UTR CCA 90 bp | TATACAAGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTTGGCGGCACAGGCCTTaGTCGGCCTCCGCCTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: YTRVKCYKELNHPAGHGTWRHRP*SASASK Trigger: CTTGGAGGCGGAGGCCGACCAAGGCCTGTGCCGCCA...AGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCTTGTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| CDS-3UTR TCA 90 bp | TATACAAGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTATGAGCGCCCGGTACTaGTGGCGGATCTGGCGGCAC | + |
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Preference number: 4 (lower is better) Translates to: YTRVKCYKELNHPAGHGTMSARY*WRIWRH Trigger: GTGCCGCCAGATCCGCCATCAGTACCGGGCGCTCAT...AGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCTTGTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| CDS-3UTR GCA 90 bp | AGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTCACACCAGGTCTGAGCGCAGCTaGTTTGCTTTCTCTTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: RVKCYKELNHPAGHGTHTRSERS*FAFSLP Trigger: GGGCAAAGAGAAAGCAAAGCAGCTGCGCTCAGACCT...GGTGTGAGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| CDS-3UTR CCA 90 bp | AGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTCACACCATCAACTCGTGGCTTTaGCACAGGGCACTCTCCGTA | + |
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Preference number: 4 (lower is better) Translates to: RVKCYKELNHPAGHGTHTINSWL*HRALSV Trigger: TACGGAGAGTGCCCTGTGCCAAAGCCACGAGTTGAT...GGTGTGAGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| CDS-3UTR CCA 90 bp | ACAAGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTCACTGGACGATCAACTCGTaGCTTTGGCACAGGGCACTC | + |
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Preference number: 4 (lower is better) Translates to: TRVKCYKELNHPAGHGTHWTINS*LWHRAL Trigger: GAGTGCCCTGTGCCAAAGCCACGAGTTGATCGTCCA...GTGAGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| CDS-3UTR TCA 90 bp | ACAAGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTCACGTCTGGGCGAAAGAGTaGGACTGTCTCGATCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: TRVKCYKELNHPAGHGTHVWAKE*DCLDLL Trigger: GAGAAGATCGAGACAGTCTCACTCTTTCGCCCAGAC...GTGAGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| CDS-3UTR GCA 90 bp | TATACAAGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTAGATGTGGTGGCGCGTaGGCCTGTAATCCCAGCTAC | + |
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Preference number: 4 (lower is better) Translates to: YTRVKCYKELNHPAGHGTRCGGA*ACNPSY Trigger: GTAGCTGGGATTACAGGCGCACGCGCCACCACATCT...AGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCTTGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| CDS-3UTR CCA 90 bp | AGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTCACACCTCCATTCTTCTTAACTaGGCAGGCATTGCCCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: RVKCYKELNHPAGHGTHTSILLN*AGIALS Trigger: GGAGAGGGCAATGCCTGCCCAGTTAAGAAGAATGGA...GGTGTGAGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| CDS-3UTR GCA 90 bp | ACAAGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTCACAGTGAGTTGAGATGGTaGCACTGCATTCCAGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: TRVKCYKELNHPAGHGTHSELRW*HCIPVW Trigger: CCAGACTGGAATGCAGTGGCACCATCTCAACTCACT...GTGAGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| CDS-3UTR CCA 90 bp | TATACAAGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTTCCTCACGGTTTTGTTaGACGGAGTTGATGAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: YTRVKCYKELNHPAGHGTSSRFC*TELMSA Trigger: GGCGCTCATCAACTCCGTCCAACAAAACCGTGAGGA...AGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCTTGTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| CDS-3UTR CCA 90 bp | AGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTCACACCCACAGGAACTTTTCTTaGACGATCAACTCGTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: RVKCYKELNHPAGHGTHTHRNFS*TINSWL Trigger: AAGCCACGAGTTGATCGTCCAAGAAAAGTTCCTGTG...GGTGTGAGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| CDS-3UTR TCA 90 bp | ACAAGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTCACGCACTCTCCGTATATTaGACCCAACAGAAAGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: TRVKCYKELNHPAGHGTHALSVY*TQQKVE Trigger: TTCCACTTTCTGTTGGGTTCAATATACGGAGAGTGC...GTGAGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| CDS-3UTR GCA 90 bp | ACAAGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTCACCAGGACTGCTTCTCTTaGTCGGGACACTTCATTAAA | + |
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Preference number: 4 (lower is better) Translates to: TRVKCYKELNHPAGHGTHQDCFS*SGHFIK Trigger: TTTAATGAAGTGTCCCGAGCAAGAGAAGCAGTCCTG...GTGAGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| CDS-3UTR GCA 90 bp | TATACAAGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTTTGAGATGGTGCCACTaGATTCCAGTCTGGGCGAAA | + |
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Preference number: 4 (lower is better) Translates to: YTRVKCYKELNHPAGHGTLRWCH*IPVWAK Trigger: TTTCGCCCAGACTGGAATGCAGTGGCACCATCTCAA...AGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCTTGTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| CDS-3UTR TCA 90 bp | ACAAGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTCACTTACACCCATATGTGTaGGTAGAGTTTCAACATATC | + |
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Preference number: 4 (lower is better) Translates to: TRVKCYKELNHPAGHGTHLHPYV*VEFQHI Trigger: GATATGTTGAAACTCTACTCACACATATGGGTGTAA...GTGAGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| CDS-3UTR GCA 90 bp | AGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTCACACCTACTTCTTTCTCTGTTaGTTCTTGATGAGATTCTTC | + |
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Preference number: 4 (lower is better) Translates to: RVKCYKELNHPAGHGTHTYFFLC*FLMRFF Trigger: GAAGAATCTCATCAAGAAGCAACAGAGAAAGAAGTA...GGTGTGAGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| CDS-3UTR GCA 90 bp | TATACAAGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTTCTCGAAAATATGTCTaGAACAATCCCAAGATTCTT | + |
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Preference number: 4 (lower is better) Translates to: YTRVKCYKELNHPAGHGTSRKYV*NNPKIL Trigger: AAGAATCTTGGGATTGTTGCAGACATATTTTCGAGA...AGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCTTGTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| CDS GCA 90 bp | CCGACGGCTCTGTGTCCTCCAGGCTCGGGCGCTCTGGGGCCTCTCTaGGCTCCCGCGCAGAGCCGCGGCGGGACCTGGGCGACAAAGGGG | + |
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Preference number: 5 (lower is better) Translates to: PTALCPPGSGALGPL*APAQSRGGTWATKG Trigger: CCCCTTTGTCGCCCAGGTCCCGCCGCGGCTCTGCGCGGGAGCGCAGAGAGGCCCCAGAGCGCCCGAGCCTGGAGGACACAGAGCCGTCGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000369017.5 ENST00000369023.8 ENST00000465189.1 ENST00000489266.5 |
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| CDS CCA 90 bp | GTCCCCGGAATCCGACGGCTCTGTGTCCTCCAGGCTCGGGCGCTCTaGGGCCTCTCTGCGCTCCCGCGCAGAGCCGCGGCGGGACCTGGG | + |
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Preference number: 5 (lower is better) Translates to: VPGIRRLCVLQARAL*GLSALPRRAAAGPG Trigger: CCCAGGTCCCGCCGCGGCTCTGCGCGGGAGCGCAGAGAGGCCCCAGAGCGCCCGAGCCTGGAGGACACAGAGCCGTCGGATTCCGGGGAC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000369017.5 ENST00000369023.8 ENST00000465189.1 ENST00000489266.5 |
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| CDS GCA 90 bp | GCCGAGGACTGCCGGGCGCAATCAAAGCACGCGGAGTCCGCGTCCTaGCTCTCCCCACTGGCTGGCTGGGCTCGGGCGAGTCCGCGAACG | + |
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Preference number: 5 (lower is better) Translates to: AEDCRAQSKHAESAS*LSPLAGWARASPRT Trigger: CGTTCGCGGACTCGCCCGAGCCCAGCCAGCCAGTGGGGAGAGGCAGGACGCGGACTCCGCGTGCTTTGATTGCGCCCGGCAGTCCTCGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000464321.5 ENST00000472431.1 ENST00000481320.5 ENST00000489266.5 |
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| CDS GCA 90 bp | CGGGTGGGGTCCGAGAACGTGCATTTGACAGCTCTCGCGTGCCGCTaGAGCTGCAGCTGCCGCTGCGAGGCCGGGAGCCCACGCCGAGGA | + |
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Preference number: 5 (lower is better) Translates to: RVGSENVHLTALACR*SCSCRCEAGSPRRG Trigger: TCCTCGGCGTGGGCTCCCGGCCTCGCAGCGGCAGCTGCAGCTGCAGCGGCACGCGAGAGCTGTCAAATGCACGTTCTCGGACCCCACCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000464321.5 ENST00000472431.1 ENST00000481320.5 ENST00000489266.5 |
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| CDS TCA 90 bp | GGAGGCGCCGCCTTACGTTGGACGGAGTTGATGAGCGCCCGGTACTaGTGGCGGATCTGGCGGCACAGGCCTTGGTCGGCCTCCGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: GGAALRWTELMSARY*WRIWRHRPWSASAS Trigger: GGAGGCGGAGGCCGACCAAGGCCTGTGCCGCCAGATCCGCCATCAGTACCGGGCGCTCATCAACTCCGTCCAACGTAAGGCGGCGCCTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489266.5 |
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| CDS CCA 90 bp | GGCGGATCTGGCGGCACAGGCCTTGGTCGGCCTCCGCCTCCAAGCTaGCCGGGTCCATCATCTCGTCCCCGGAATCCGACGGCTCTGTGT | + |
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Preference number: 5 (lower is better) Translates to: GGSGGTGLGRPPPPS*PGPSSRPRNPTALC Trigger: ACACAGAGCCGTCGGATTCCGGGGACGAGATGATGGACCCGGCCAGCTTGGAGGCGGAGGCCGACCAAGGCCTGTGCCGCCAGATCCGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000369017.5 ENST00000369023.8 ENST00000465189.1 ENST00000489266.5 |
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| CDS CCA 90 bp | TCAAAGCACGCGGAGTCCGCGTCCTGCCTCTCCCCACTGGCTGGCTaGGCTCGGGCGAGTCCGCGAACGGCTCTGGCCTCCAGCTTTTCC | + |
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Preference number: 5 (lower is better) Translates to: SKHAESASCLSPLAG*ARASPRTALASSFS Trigger: GGAAAAGCTGGAGGCCAGAGCCGTTCGCGGACTCGCCCGAGCCCAGCCAGCCAGTGGGGAGAGGCAGGACGCGGACTCCGCGTGCTTTGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000464321.5 ENST00000472431.1 ENST00000481320.5 ENST00000489266.5 |
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| CDS TCA 90 bp | AGATTCGAATTCCGCGGGTCCGGGTGGGGTCCGAGAACGTGCATTTaGCAGCTCTCGCGTGCCGCTGCAGCTGCAGCTGCCGCTGCGAGG | + |
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Preference number: 5 (lower is better) Translates to: RFEFRGSGWGPRTCI*QLSRAAAAAAAAAR Trigger: CCTCGCAGCGGCAGCTGCAGCTGCAGCGGCACGCGAGAGCTGTCAAATGCACGTTCTCGGACCCCACCCGGACCCGCGGAATTCGAATCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000464321.5 ENST00000472431.1 ENST00000481320.5 ENST00000489266.5 |
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| CDS TCA 90 bp | ATGTCCTCACGGTTTTGTTGGACGGAGTTGATGAGCGCCCGGTACTaGTGGCGGATCTGGCGGCACAGGCCTTGGTCGGCCTCCGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: MSSRFCWTELMSARY*WRIWRHRPWSASAS Trigger: GGAGGCGGAGGCCGACCAAGGCCTGTGCCGCCAGATCCGCCATCAGTACCGGGCGCTCATCAACTCCGTCCAACAAAACCGTGAGGACAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369017.5 ENST00000369023.8 |
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| CDS TCA 90 bp | TTCTCTTTGCCCAAATGTTGGACGGAGTTGATGAGCGCCCGGTACTaGTGGCGGATCTGGCGGCACAGGCCTTGGTCGGCCTCCGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: FSLPKCWTELMSARY*WRIWRHRPWSASAS Trigger: GGAGGCGGAGGCCGACCAAGGCCTGTGCCGCCAGATCCGCCATCAGTACCGGGCGCTCATCAACTCCGTCCAACATTTGGGCAAAGAGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465189.1 |
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| CDS GCA 90 bp | ACGGCTCCAGCCACAAAGTGGGAGCACTTTGTCAACAATTTAAGGTaGGGCGAGGGGCTGGCACCCGGCGCGTCTCTACTAACGCCGCGC | + |
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Preference number: 5 (lower is better) Translates to: TAPATKWEHFVNNLR*GEGLAPGASLLTPR Trigger: GCGCGGCGTTAGTAGAGACGCGCCGGGTGCCAGCCCCTCGCCGCACCTTAAATTGTTGACAAAGTGCTCCCACTTTGTGGCTGGAGCCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000464321.5 ENST00000481320.5 ENST00000489266.5 |
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| CDS CCA 90 bp | CCACTCGGGGACCCGCGCCAAGGTCGTACGGCTCCAGCCACAAAGTaGGAGCACTTTGTCAACAATTTAAGGTGCGGCGAGGGGCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: PLGDPRQGRTAPATK*EHFVNNLRCGEGLA Trigger: TGCCAGCCCCTCGCCGCACCTTAAATTGTTGACAAAGTGCTCCCACTTTGTGGCTGGAGCCGTACGACCTTGGCGCGGGTCCCCGAGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000464321.5 ENST00000472431.1 ENST00000481320.5 ENST00000489266.5 |
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| CDS CCA 90 bp | AAGGGCTGGACTCCGGCTGCAGCCTCTGAGTGCTCCATAACTGAGTaGTTCTCAAACTTTGCAAGCAATACACACCATCACCTGGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: KGWTPAAASECSITE*FSNFASNTHHHLEG Trigger: GCCCTCCAGGTGATGGTGTGTATTGCTTGCAAAGTTTGAGAACCACTCAGTTATGGAGCACTCAGAGGCTGCAGCCGGAGTCCAGCCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000472431.1 ENST00000481320.5 ENST00000489266.5 |
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| CDS GCA 90 bp | GGTTTTCTTAACCCAAAGGGCTGGACTCCGGCTGCAGCCTCTGAGTaGTCCATAACTGAGTGGTTCTCAAACTTTGCAAGCAATACACAC | + |
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Preference number: 5 (lower is better) Translates to: GFLNPKGWTPAAASE*SITEWFSNFASNTH Trigger: GTGTGTATTGCTTGCAAAGTTTGAGAACCACTCAGTTATGGAGCACTCAGAGGCTGCAGCCGGAGTCCAGCCCTTTGGGTTAAGAAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472431.1 |
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| CDS GCA 90 bp | TCTAACCTTAACCCAAAGGGCTGGACTCCGGCTGCAGCCTCTGAGTaGTCCATAACTGAGTGGTTCTCAAACTTTGCAAGCAATACACAC | + |
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Preference number: 5 (lower is better) Translates to: SNLNPKGWTPAAASE*SITEWFSNFASNTH Trigger: GTGTGTATTGCTTGCAAAGTTTGAGAACCACTCAGTTATGGAGCACTCAGAGGCTGCAGCCGGAGTCCAGCCCTTTGGGTTAAGGTTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000481320.5 ENST00000489266.5 |
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| CDS-3UTR CAA 90 bp | ACAAGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTCACGATCAACTCGTGGCTTaGGCACAGGGCACTCTCCGT | + |
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Preference number: 5 (lower is better) Translates to: TRVKCYKELNHPAGHGTHDQLVA*AQGTLR Trigger: ACGGAGAGTGCCCTGTGCCAAAGCCACGAGTTGATC...GTGAGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| CDS GCA 90 bp | TCAACATATCTTAACATGTCAAAGGAGCTCAGGTCTGAGCGCAGCTaGTTTGCTTTCTCTTTGCCCAAATGTTGGACGGAGTTGATGAGC | + |
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Preference number: 5 (lower is better) Translates to: STYLNMSKELRSERS*FAFSLPKCWTELMS Trigger: GCTCATCAACTCCGTCCAACATTTGGGCAAAGAGAAAGCAAAGCAGCTGCGCTCAGACCTGAGCTCCTTTGACATGTTAAGATATGTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465189.1 |
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| CDS-3UTR CAA 90 bp | ACAAGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTCACGGAGGTTGCAGTGAGTaGAGATGGTGCCACTGCATT | + |
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Preference number: 5 (lower is better) Translates to: TRVKCYKELNHPAGHGTHGGCSE*RWCHCI Trigger: AATGCAGTGGCACCATCTCAACTCACTGCAACCTCC...GTGAGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| CDS-3UTR CAA 90 bp | TATACAAGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTGTCCTCACGGTTTTGTaGGACGGAGTTGATGAGCGC | + |
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Preference number: 5 (lower is better) Translates to: YTRVKCYKELNHPAGHGTVLTVL*DGVDER Trigger: GCGCTCATCAACTCCGTCCAACAAAACCGTGAGGAC...AGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCTTGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| CDS-3UTR CAA 90 bp | AGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTCACACCTATGTCCTCACGGTTTaGTTGGACGGAGTTGATGAG | + |
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Preference number: 5 (lower is better) Translates to: RVKCYKELNHPAGHGTHTYVLTV*LDGVDE Trigger: CTCATCAACTCCGTCCAACAAAACCGTGAGGACATA...GGTGTGAGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| CDS-3UTR CAA 90 bp | AGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTCACACCTCACAGGAACTTTTCTaGGACGATCAACTCGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: RVKCYKELNHPAGHGTHTSQELF*DDQLVA Trigger: AGCCACGAGTTGATCGTCCAAGAAAAGTTCCTGTGA...GGTGTGAGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| CDS-3UTR CAA 90 bp | ACAAGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTCACCATTGCCCTCTCCTCTaGTATCACAGGAACTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: TRVKCYKELNHPAGHGTHHCPLL*YHRNFS Trigger: AGAAAAGTTCCTGTGATACAAGAGGAGAGGGCAATG...GTGAGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| CDS-3UTR CAA 90 bp | TATACAAGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTGGGTTCAAGACTAGCTaGGCCAACATGGCGAAACAA | + |
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Preference number: 5 (lower is better) Translates to: YTRVKCYKELNHPAGHGTGFKTS*ANMAKQ Trigger: TTGTTTCGCCATGTTGGCCAAGCTAGTCTTGAACCC...AGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCTTGTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| CDS-3UTR CAA 90 bp | TATACAAGAGTAAAATGCTATAAAGAACTTAATCATCCAGCTGGGCATGGCACTAGGACCTCTGTTAATTaGTCACCGGCATTCAGTATG | + |
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Preference number: 5 (lower is better) Translates to: YTRVKCYKELNHPAGHGTRTSVN*SPAFSM Trigger: CATACTGAATGCCGGTGACAAATTAACAGAGGTCCT...AGTGCCATGCCCAGCTGGATGATTAAGTTCTTTATAGCATTTTACTCTTGTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369017.5 |
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| CDS TCA 90 bp | GAACTTTCATATCAAAGTTTCAAAAGTCTCCAAACAACGGCATCATaGCTGTCACCTCTACAATACCAAATAATCTTTGTCCCTACAAGA | + |
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Preference number: 5 (lower is better) Translates to: ELSYQSFKSLQTTAS*LSPLQYQIIFVPTR Trigger: TCTTGTAGGGACAAAGATTATTTGGTATTGTAGAGGTGACAGTCATGATGCCGTTGTTTGGAGACTTTTGAAACTTTGATATGAAAGTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481320.5 |
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| CDS CCA 72 bp | CCTCTCTGCGCTCCCGCGCAGAGCCGCGGCGGGACCTaGGCGACAAAGGGGACCGCGAGCGGGAGCGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: PLCAPAQSRGGT*ATKGTASGSGS Trigger: GCTCCCGCTCCCGCTCGCGGTCCCCTTTGTCGCCCAGGTCCCGCCGCGGCTCTGCGCGGGAGCGCAGAGAGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000369017.5 ENST00000369023.8 ENST00000465189.1 ENST00000489266.5 |
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| CDS GCA 72 bp | GCTGCCGCTGCGAGGCCGGGAGCCCACGCCGAGGACTaGCGGGCGCAATCAAAGCACGCGGAGTCCGCGTCC | + |
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Preference number: 6 (lower is better) Translates to: AAAARPGAHAED*RAQSKHAESAS Trigger: GGACGCGGACTCCGCGTGCTTTGATTGCGCCCGGCAGTCCTCGGCGTGGGCTCCCGGCCTCGCAGCGGCAGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000464321.5 ENST00000472431.1 ENST00000481320.5 ENST00000489266.5 |
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| CDS CCA 72 bp | ATCCGACGGCTCTGTGTCCTCCAGGCTCGGGCGCTCTaGGGCCTCTCTGCGCTCCCGCGCAGAGCCGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: IRRLCVLQARAL*GLSALPRRAAA Trigger: CGCCGCGGCTCTGCGCGGGAGCGCAGAGAGGCCCCAGAGCGCCCGAGCCTGGAGGACACAGAGCCGTCGGAT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000369017.5 ENST00000369023.8 ENST00000465189.1 ENST00000489266.5 |
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| CDS CCA 72 bp | TGGCTGGCTGGGCTCGGGCGAGTCCGCGAACGGCTCTaGCCTCCAGCTTTTCCAGCCCGCCACTCGGGGACC | + |
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Preference number: 6 (lower is better) Translates to: WLAGLGRVRERL*PPAFPARHSGT Trigger: GGTCCCCGAGTGGCGGGCTGGAAAAGCTGGAGGCCAGAGCCGTTCGCGGACTCGCCCGAGCCCAGCCAGCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000464321.5 ENST00000472431.1 ENST00000481320.5 ENST00000489266.5 |
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| CDS CCA 72 bp | GGCGGCACAGGCCTTGGTCGGCCTCCGCCTCCAAGCTaGCCGGGTCCATCATCTCGTCCCCGGAATCCGACG | + |
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Preference number: 6 (lower is better) Translates to: GGTGLGRPPPPS*PGPSSRPRNPT Trigger: CGTCGGATTCCGGGGACGAGATGATGGACCCGGCCAGCTTGGAGGCGGAGGCCGACCAAGGCCTGTGCCGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000369017.5 ENST00000369023.8 ENST00000465189.1 ENST00000489266.5 |
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| CDS TCA 72 bp | TTCCGCGGGTCCGGGTGGGGTCCGAGAACGTGCATTTaGCAGCTCTCGCGTGCCGCTGCAGCTGCAGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: FRGSGWGPRTCI*QLSRAAAAAAA Trigger: GGCAGCTGCAGCTGCAGCGGCACGCGAGAGCTGTCAAATGCACGTTCTCGGACCCCACCCGGACCCGCGGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000464321.5 ENST00000472431.1 ENST00000481320.5 ENST00000489266.5 |
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| CDS CAA 72 bp | ATTCCGCGGGTCCGGGTGGGGTCCGAGAACGTGCATTaGACAGCTCTCGCGTGCCGCTGCAGCTGCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: IPRVRVGSENVH*TALACRCSCSC Trigger: GCAGCTGCAGCTGCAGCGGCACGCGAGAGCTGTCAAATGCACGTTCTCGGACCCCACCCGGACCCGCGGAAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000464321.5 ENST00000472431.1 ENST00000481320.5 ENST00000489266.5 |
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| CDS CAA 90 bp | GAGATTCGAATTCCGCGGGTCCGGGTGGGGTCCGAGAACGTGCATTaGACAGCTCTCGCGTGCCGCTGCAGCTGCAGCTGCCGCTGCGAG | + |
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Preference number: 6 (lower is better) Translates to: EIRIPRVRVGSENVH*TALACRCSCSCRCE Trigger: CTCGCAGCGGCAGCTGCAGCTGCAGCGGCACGCGAGAGCTGTCAAATGCACGTTCTCGGACCCCACCCGGACCCGCGGAATTCGAATCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000464321.5 ENST00000472431.1 ENST00000481320.5 ENST00000489266.5 |
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| CDS TCA 72 bp | GCCTTACGTTGGACGGAGTTGATGAGCGCCCGGTACTaGTGGCGGATCTGGCGGCACAGGCCTTGGTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: ALRWTELMSARY*WRIWRHRPWSA Trigger: GGCCGACCAAGGCCTGTGCCGCCAGATCCGCCATCAGTACCGGGCGCTCATCAACTCCGTCCAACGTAAGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489266.5 |
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| CDS TCA 72 bp | CGGTTTTGTTGGACGGAGTTGATGAGCGCCCGGTACTaGTGGCGGATCTGGCGGCACAGGCCTTGGTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: RFCWTELMSARY*WRIWRHRPWSA Trigger: GGCCGACCAAGGCCTGTGCCGCCAGATCCGCCATCAGTACCGGGCGCTCATCAACTCCGTCCAACAAAACCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369017.5 ENST00000369023.8 |
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| CDS TCA 72 bp | CCCAAATGTTGGACGGAGTTGATGAGCGCCCGGTACTaGTGGCGGATCTGGCGGCACAGGCCTTGGTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: PKCWTELMSARY*WRIWRHRPWSA Trigger: GGCCGACCAAGGCCTGTGCCGCCAGATCCGCCATCAGTACCGGGCGCTCATCAACTCCGTCCAACATTTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465189.1 |
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| CDS CAA 90 bp | CAGTATGTCCTCACGGTTTTCATCACCTGGAGGGCCACTCCACAGTaGCGCGGACCCACCCAGAGATTCGAATTCCGCGGGTCCGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: QYVLTVFITWRATPQ*RGPTQRFEFRGSGW Trigger: CCACCCGGACCCGCGGAATTCGAATCTCTGGGTGGGTCCGCGCAACTGTGGAGTGGCCCTCCAGGTGATGAAAACCGTGAGGACATACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000464321.5 |
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| CDS GCA 72 bp | GCCGCTGCTGTCCCCAGACATAGCGCCAATTCACCGTaGAACTTCGGAACGGCGGAAGTTCGCGCCAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: AAAVPRHSANSP*NFGTAEVRARN Trigger: GTTTCTGGCGCGAACTTCCGCCGTTCCGAAGTTGCACGGTGAATTGGCGCTATGTCTGGGGACAGCAGCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369023.8 ENST00000489266.5 |
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| CDS CAA 72 bp | GCAATACACACCATCACCTGGAGGGCCACTCCACAGTaGCGCGGACCCACCCAGAGATTCGAATTCCGCGGG | + |
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Preference number: 6 (lower is better) Translates to: AIHTITWRATPQ*RGPTQRFEFRG Trigger: CCCGCGGAATTCGAATCTCTGGGTGGGTCCGCGCAACTGTGGAGTGGCCCTCCAGGTGATGGTGTGTATTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000472431.1 ENST00000481320.5 ENST00000489266.5 |
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| CDS GCA 72 bp | CAATACACACCATCACCTGGAGGGCCACTCCACAGTTaGGCGGACCCACCCAGAGATTCGAATTCCGCGGGT | + |
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Preference number: 6 (lower is better) Translates to: QYTPSPGGPLHS*ADPPRDSNSAG Trigger: ACCCGCGGAATTCGAATCTCTGGGTGGGTCCGCGCAACTGTGGAGTGGCCCTCCAGGTGATGGTGTGTATTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000472431.1 ENST00000481320.5 ENST00000489266.5 |
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| CDS CCA 72 bp | ACCGGCATTCAGTATGTCCTCACGGTTTTCATCACCTaGAGGGCCACTCCACAGTTGCGCGGACCCACCCAG | + |
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Preference number: 6 (lower is better) Translates to: TGIQYVLTVFIT*RATPQLRGPTQ Trigger: CTGGGTGGGTCCGCGCAACTGTGGAGTGGCCCTCCAGGTGATGAAAACCGTGAGGACATACTGAATGCCGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000464321.5 |
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| CDS GCA 72 bp | GCCACAAAGTGGGAGCACTTTGTCAACAATTTAAGGTaGGGCGAGGGGCTGGCACCCGGCGCGTCTCTACTA | + |
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Preference number: 6 (lower is better) Translates to: ATKWEHFVNNLR*GEGLAPGASLL Trigger: TAGTAGAGACGCGCCGGGTGCCAGCCCCTCGCCGCACCTTAAATTGTTGACAAAGTGCTCCCACTTTGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000464321.5 ENST00000481320.5 ENST00000489266.5 |
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| CDS CCA 72 bp | GACCCGCGCCAAGGTCGTACGGCTCCAGCCACAAAGTaGGAGCACTTTGTCAACAATTTAAGGTGCGGCGAG | + |
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Preference number: 6 (lower is better) Translates to: DPRQGRTAPATK*EHFVNNLRCGE Trigger: CTCGCCGCACCTTAAATTGTTGACAAAGTGCTCCCACTTTGTGGCTGGAGCCGTACGACCTTGGCGCGGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000464321.5 ENST00000472431.1 ENST00000481320.5 ENST00000489266.5 |
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| CDS CCA 72 bp | GAAACCCTAGCTCCCTCTAACCTTAACCCAAAGGGCTaGACTCCGGCTGCAGCCTCTGAGTGCTCCATAACT | + |
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Preference number: 6 (lower is better) Translates to: ETLAPSNLNPKG*TPAAASECSIT Trigger: AGTTATGGAGCACTCAGAGGCTGCAGCCGGAGTCCAGCCCTTTGGGTTAAGGTTAGAGGGAGCTAGGGTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000481320.5 ENST00000489266.5 |
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| CDS GCA 72 bp | CTGGGCTTACTGCAAGTGAAGGCAGAGTCAGAACTATaGAGGGGCAACAGGCAGAGCTTTACCTCCCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: LGLLQVKAESEL*RGNRQSFTSQS Trigger: TGACTGGGAGGTAAAGCTCTGCCTGTTGCCCCTGCATAGTTCTGACTCTGCCTTCACTTGCAGTAAGCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477289.1 |
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| CDS CCA 72 bp | TCAGTATGTCCTCACGGTTTTCTTAACCCAAAGGGCTaGACTCCGGCTGCAGCCTCTGAGTGCTCCATAACT | + |
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Preference number: 6 (lower is better) Translates to: SVCPHGFLNPKG*TPAAASECSIT Trigger: AGTTATGGAGCACTCAGAGGCTGCAGCCGGAGTCCAGCCCTTTGGGTTAAGAAAACCGTGAGGACATACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472431.1 |
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| CDS CAA 72 bp | GCATTGCCCTCTCCTCTTGTATCACAGGAACTTTTCTaGGACGATCAACTCGTGGCTTTGGCACAGGGCACT | + |
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Preference number: 6 (lower is better) Translates to: ALPSPLVSQELF*DDQLVALAQGT Trigger: AGTGCCCTGTGCCAAAGCCACGAGTTGATCGTCCAAGAAAAGTTCCTGTGATACAAGAGGAGAGGGCAATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000369017.5 ENST00000369023.8 ENST00000468209.5 ENST00000489266.5 |
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| CDS CCA 72 bp | ACTCCGGCTGCAGCCTCTGAGTGCTCCATAACTGAGTaGTTCTCAAACTTTGCAAGCAATACACACCATCAC | + |
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Preference number: 6 (lower is better) Translates to: TPAAASECSITE*FSNFASNTHHH Trigger: GTGATGGTGTGTATTGCTTGCAAAGTTTGAGAACCACTCAGTTATGGAGCACTCAGAGGCTGCAGCCGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000472431.1 ENST00000481320.5 ENST00000489266.5 |
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| CDS GCA 72 bp | CTTAACATGTCAAAGGAGCTCAGGTCTGAGCGCAGCTaGTTTGCTTTCTCTTTGCCCAAATCTGAAGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: LNMSKELRSERS*FAFSLPKSEAK Trigger: TTTGGCTTCAGATTTGGGCAAAGAGAAAGCAAAGCAGCTGCGCTCAGACCTGAGCTCCTTTGACATGTTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000369017.5 ENST00000369023.8 ENST00000464321.5 ENST00000468209.5 ENST00000472431.1 ENST00000481320.5 ENST00000489266.5 |
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