Pregenerated sensors for NSMCE1-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000245888Ensembl transcript IDs: ENST00000499939.2, ENST00000565060.1, ENST00000566535.1, ENST00000566854.5, ENST00000661766.1
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGCCCGGGGCAGGGCACTACATTGTGCCAGCGGAATGGTGGCCATTaGGGGAAGCCCAGGCTGCACGCCAATTCTTCCTCCTTGGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GPGQGTTLCQRNGGH*GKPRLHANSSSLVR Trigger: CCTGACCAAGGAGGAAGAATTGGCGTGCAGCCTGGGCTTCCCTCAATGGCCACCATTCCGCTGGCACAATGTAGTGCCCTGCCCCGGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000499939.2 ENST00000565060.1 ENST00000661766.1 |
||
| CDS GCA 90 bp | GGCTGCACGCCAATTCTTCCTCCTTGGTCAGGGAAGTCACTGAGGTaGAGGAGGCGGAGGGCGACAAGTGGAAGCCCCTTCCCATTATTA | + |
|
Preference number: 5 (lower is better) Translates to: GCTPILPPWSGKSLR*RRRRATSGSPFPLL Trigger: TAATAATGGGAAGGGGCTTCCACTTGTCGCCCTCCGCCTCCTGCACCTCAGTGACTTCCCTGACCAAGGAGGAAGAATTGGCGTGCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000499939.2 ENST00000565060.1 ENST00000661766.1 |
||
| CDS GCA 90 bp | CTACATTGTGCCAGCGGAATGGTGGCCATTGAGGGAAGCCCAGGCTaGACGCCAATTCTTCCTCCTTGGTCAGGGAAGTCACTGAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LHCASGMVAIEGSPG*TPILPPWSGKSLRC Trigger: GCACCTCAGTGACTTCCCTGACCAAGGAGGAAGAATTGGCGTGCAGCCTGGGCTTCCCTCAATGGCCACCATTCCGCTGGCACAATGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000499939.2 ENST00000565060.1 ENST00000661766.1 |
||
| CDS GCA 90 bp | TCGAGCTCCCAGGGGGTGCTGAGGCTGCTGTTTCCCTTGCTAGGCTaGATCCCTAGCTCTCAGACCAGGGATAGAATTCAAACGTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSSQGVLRLLFPLLG*IPSSQTRDRIQTFG Trigger: TCCAAACGTTTGAATTCTATCCCTGGTCTGAGAGCTAGGGATGCAGCCTAGCAAGGGAAACAGCAGCCTCAGCACCCCCTGGGAGCTCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565060.1 |
||
| CDS CCA 90 bp | ACAATAGCTGGCTGCCGACTTAGGCCATGGATGGGTGATGCTTCTTaGTCTACTAATAGGTGCTTGGCCTCATGGGCAGTTCCGCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TIAGCRLRPWMGDAS*STNRCLASWAVPQS Trigger: AGACTGCGGAACTGCCCATGAGGCCAAGCACCTATTAGTAGACCAAGAAGCATCACCCATCCATGGCCTAAGTCGGCAGCCAGCTATTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566535.1 ENST00000566854.5 |
||
| CDS CCA 90 bp | TGGATGGGTGATGCTTCTTGGTCTACTAATAGGTGCTTGGCCTCATaGGCAGTTCCGCAGTCTGTCTCCCACTGTGTATCACTGGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: WMGDASWSTNRCLAS*AVPQSVSHCVSLAS Trigger: ACTGGCCAGTGATACACAGTGGGAGACAGACTGCGGAACTGCCCATGAGGCCAAGCACCTATTAGTAGACCAAGAAGCATCACCCATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566535.1 |
||
| CDS CCA 90 bp | AAACTGAGGCTCAGTGACTTGCCCAAGCGCCTGCCAACTAGTAAGTaGCAGAGCCAGGATTCTAGATCAGGCTCTATGACCACAGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KLRLSDLPKRLPTSK*QSQDSRSGSMTTES Trigger: GGACTCTGTGGTCATAGAGCCTGATCTAGAATCCTGGCTCTGCCACTTACTAGTTGGCAGGCGCTTGGGCAAGTCACTGAGCCTCAGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661766.1 |
||
| CDS GCA 90 bp | ATTCAGGCTGCAATGGCCCACACATGCCTGCAGATCTTGCTAAAATaGAGATTCCGCTTCAGTATGTCAGGGAGGGGCCTCAGTCAACTC | + |
|
Preference number: 5 (lower is better) Translates to: IQAAMAHTCLQILLK*RFRFSMSGRGLSQL Trigger: GAGTTGACTGAGGCCCCTCCCTGACATACTGAAGCGGAATCTGCATTTTAGCAAGATCTGCAGGCATGTGTGGGCCATTGCAGCCTGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566854.5 |
||
| CDS CCA 90 bp | TTAGGCCATGGATGGGTGATGCTTCTTGGTCTACTAATAGGTGCTTaGCCTCATGGGCAGTTCCGCAGTCTGTCTCCCACTGTGTATCAC | + |
|
Preference number: 5 (lower is better) Translates to: LGHGWVMLLGLLIGA*PHGQFRSLSPTVYH Trigger: GTGATACACAGTGGGAGACAGACTGCGGAACTGCCCATGAGGCCAAGCACCTATTAGTAGACCAAGAAGCATCACCCATCCATGGCCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566535.1 |
||
| CDS GCA 90 bp | TGTCCAATCCGATTTCCCAGATGGAACCTCTGTGAGCATTGGGTGTaGATTCTTCCAGACCTCCCACTGTGTATCACTGGCCAGTTATCG | + |
|
Preference number: 5 (lower is better) Translates to: CPIRFPRWNLCEHWV*ILPDLPLCITGQLS Trigger: CGATAACTGGCCAGTGATACACAGTGGGAGGTCTGGAAGAATGCACACCCAATGCTCACAGAGGTTCCATCTGGGAAATCGGATTGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566854.5 |
||
| CDS CCA 90 bp | TCCCAGACTCAGATGAGAACAATAGCTGGCTGCCGACTTAGGCCATaGATGGGTGATGCTTCTTGGTCTACTAATAGGTGCTTGGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SQTQMRTIAGCRLRP*MGDASWSTNRCLAS Trigger: TGAGGCCAAGCACCTATTAGTAGACCAAGAAGCATCACCCATCCATGGCCTAAGTCGGCAGCCAGCTATTGTTCTCATCTGAGTCTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566535.1 ENST00000566854.5 |
||
| CDS GCA 90 bp | GCCAGTTATCGTCGCACTTCTTCTTCCCTCCTGATTAATTCAGGCTaGAATGGCCCACACATGCCTGCAGATCTTGCTAAAATGCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: ASYRRTSSSLLINSG*NGPHMPADLAKMQI Trigger: AATCTGCATTTTAGCAAGATCTGCAGGCATGTGTGGGCCATTGCAGCCTGAATTAATCAGGAGGGAAGAAGAAGTGCGACGATAACTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566854.5 |
||
| CDS GCA 90 bp | ATGGAAATCCTGAACTCCCAGACTCAGATGAGAACAATAGCTGGCTaGCGACTTAGGCCATGGATGGGTGATGCTTCTTGGTCTACTAAT | + |
|
Preference number: 5 (lower is better) Translates to: MEILNSQTQMRTIAG*RLRPWMGDASWSTN Trigger: ATTAGTAGACCAAGAAGCATCACCCATCCATGGCCTAAGTCGGCAGCCAGCTATTGTTCTCATCTGAGTCTGGGAGTTCAGGATTTCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566535.1 ENST00000566854.5 |
||
| CDS TCA 90 bp | TCCTATGTCTCAGAGACACTGAGTTTAAGGCCCAGGATTCCATGTTaGCCATCCAGCTCCAAAGCTGAAGCTTTTAATCACCACACACCA | + |
|
Preference number: 5 (lower is better) Translates to: SYVSETLSLRPRIPC*PSSSKAEAFNHHTP Trigger: TGGTGTGTGGTGATTAAAAGCTTCAGCTTTGGAGCTGGATGGTCAACATGGAATCCTGGGCCTTAAACTCAGTGTCTCTGAGACATAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000499939.2 ENST00000661766.1 |
||
| CDS TCA 90 bp | CAGTTGCTTCAATCCGTAGATGGGGAACCTGTAAACATGGACAGCTaGCTGTACTTTGTCCTATGTCTCAGAGACACTGAGTTTAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QLLQSVDGEPVNMDS*LYFVLCLRDTEFKA Trigger: GGCCTTAAACTCAGTGTCTCTGAGACATAGGACAAAGTACAGTCAGCTGTCCATGTTTACAGGTTCCCCATCTACGGATTGAAGCAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000499939.2 ENST00000661766.1 |
||
| CDS GCA 90 bp | CAGGTACTGCTGTTCTATATTAGTTACCTGTTTCCCTTGCTAGGCTaGATCCCTAGCTCTCAGACCAGGGATAGAATTCAAACGTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: QVLLFYISYLFPLLG*IPSSQTRDRIQTFG Trigger: TCCAAACGTTTGAATTCTATCCCTGGTCTGAGAGCTAGGGATGCAGCCTAGCAAGGGAAACAGGTAACTAATATAGAACAGCAGTACCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000499939.2 ENST00000661766.1 |
||
| CDS TCA 90 bp | ACTATTTTGCAAGAACTAATATCCTCATTTAATGGAAGAGGAAACTaGGGCTCAGTGACTTGCCCAAGCGCCTGCCAACTAGTAAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TILQELISSFNGRGN*GSVTCPSACQLVSG Trigger: GCCACTTACTAGTTGGCAGGCGCTTGGGCAAGTCACTGAGCCTCAGTTTCCTCTTCCATTAAATGAGGATATTAGTTCTTGCAAAATAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661766.1 |
||
| CDS GCA 90 bp | TGGTCTCCTGTTCAGCCAGCTCTGTGTGAATTAAACTTTCTCTATTaGAATTCCCCTGTCTTGATAAATTGGTTCTGTCTAGGAAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WSPVQPALCELNFLY*NSPVLINWFCLGSR Trigger: CCTGCTTCCTAGACAGAACCAATTTATCAAGACAGGGGAATTGCAATAGAGAAAGTTTAATTCACACAGAGCTGGCTGAACAGGAGACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000499939.2 |
||
| CDS CCA 90 bp | ATACATAAGTATATATATTCAGTGAATGTTTCCCCGGATCTATTCTaGCCCTGTCCAATCCGATTTCCCAGATGGAACCTCTGTGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: IHKYIYSVNVSPDLF*PCPIRFPRWNLCEH Trigger: ATGCTCACAGAGGTTCCATCTGGGAAATCGGATTGGACAGGGCCAGAATAGATCCGGGGAAACATTCACTGAATATATATACTTATGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566854.5 |
||
| CDS TCA 90 bp | CACCAAATTATCCTTGAAAACCCTGAATTTCCAGGGAGACTGATTTaGGTAATAATAAAACTGTGGTCTCCTGTTCAGCCAGCTCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: HQIILENPEFPGRLI*VIIKLWSPVQPALC Trigger: ACACAGAGCTGGCTGAACAGGAGACCACAGTTTTATTATTACTCAAATCAGTCTCCCTGGAAATTCAGGGTTTTCAAGGATAATTTGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000499939.2 |
||
| CDS CCA 90 bp | TGTGAATTAAACTTTCTCTATTGCAATTCCCCTGTCTTGATAAATTaGTTCTGTCTAGGAAGCAGGCAAGGAGAACCATTGGGTGCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: CELNFLYCNSPVLIN*FCLGSRQGEPLGAY Trigger: GTAAGCACCCAATGGTTCTCCTTGCCTGCTTCCTAGACAGAACCAATTTATCAAGACAGGGGAATTGCAATAGAGAAAGTTTAATTCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000499939.2 |
||
| CDS TCA 90 bp | TTGAGTAATAATAAAACTGTGGTCTCCTGTTCAGCCAGCTCTGTGTaGATTAAACTTTCTCTATTGCAATTCCCCTGTCTTGATAAATTG | + |
|
Preference number: 5 (lower is better) Translates to: LSNNKTVVSCSASSV*IKLSLLQFPCLDKL Trigger: CAATTTATCAAGACAGGGGAATTGCAATAGAGAAAGTTTAATTCACACAGAGCTGGCTGAACAGGAGACCACAGTTTTATTATTACTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000499939.2 |
||
| CDS CCA 72 bp | AGGCCCGGGGCAGGGCACTACATTGTGCCAGCGGAATaGTGGCCATTGAGGGAAGCCCAGGCTGCACGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: RPGAGHYIVPAE*WPLREAQAARQ Trigger: TTGGCGTGCAGCCTGGGCTTCCCTCAATGGCCACCATTCCGCTGGCACAATGTAGTGCCCTGCCCCGGGCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000499939.2 ENST00000565060.1 ENST00000661766.1 |
||
| CDS CAA 90 bp | AGGCCCGGGGCAGGGCACTACATTGTGCCAGCGGAATGGTGGCCATaGAGGGAAGCCCAGGCTGCACGCCAATTCTTCCTCCTTGGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: RPGAGHYIVPAEWWP*REAQAARQFFLLGQ Trigger: CTGACCAAGGAGGAAGAATTGGCGTGCAGCCTGGGCTTCCCTCAATGGCCACCATTCCGCTGGCACAATGTAGTGCCCTGCCCCGGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000499939.2 ENST00000565060.1 ENST00000661766.1 |
||
| CDS CCA 72 bp | GAGGGAAGCCCAGGCTGCACGCCAATTCTTCCTCCTTaGTCAGGGAAGTCACTGAGGTGCAGGAGGCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: EGSPGCTPILPP*SGKSLRCRRRR Trigger: CCTCCGCCTCCTGCACCTCAGTGACTTCCCTGACCAAGGAGGAAGAATTGGCGTGCAGCCTGGGCTTCCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000499939.2 ENST00000565060.1 ENST00000661766.1 |
||
| CDS CCA 72 bp | GGACGGTCTCTCCCAAGTTCTGAACAAGTGCTGCCATaGGGGAAGGCTGGCCCACTGTCGTCAGACTTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GRSLPSSEQVLP*GKAGPLSSDFP Trigger: GGGGAAGTCTGACGACAGTGGGCCAGCCTTCCCCCATGGCAGCACTTGTTCAGAACTTGGGAGAGACCGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000499939.2 |
||
| CDS TCA 72 bp | CAGGGCACTACATTGTGCCAGCGGAATGGTGGCCATTaGGGGAAGCCCAGGCTGCACGCCAATTCTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: QGTTLCQRNGGH*GKPRLHANSSS Trigger: GGAGGAAGAATTGGCGTGCAGCCTGGGCTTCCCTCAATGGCCACCATTCCGCTGGCACAATGTAGTGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000499939.2 ENST00000565060.1 ENST00000661766.1 |
||
| CDS TCA 72 bp | CGTGAGCCACCGCGACCGGACCAGAGTCCACATTTTTaGCGTCGAGGCCACACTCAGTTCCACAGATGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: REPPRPDQSPHF*RRGHTQFHRWG Trigger: TCCCCATCTGTGGAACTGAGTGTGGCCTCGACGTCAAAAATGTGGACTCTGGTCCGGTCGCGGTGGCTCACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000499939.2 ENST00000565060.1 ENST00000661766.1 |
||
| CDS GCA 72 bp | AAAGGGGACGGTCTCTCCCAAGTTCTGAACAAGTGCTaGCATGGGGGAAGGCTGGCCCACTGTCGTCAGACT | + |
|
Preference number: 6 (lower is better) Translates to: KGDGLSQVLNKC*HGGRLAHCRQT Trigger: AGTCTGACGACAGTGGGCCAGCCTTCCCCCATGGCAGCACTTGTTCAGAACTTGGGAGAGACCGTCCCCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000499939.2 |
||
| CDS CCA 72 bp | GAAGTCACTGAGGTGCAGGAGGCGGAGGGCGACAAGTaGAAGCCCCTTCCCATTATTAAGGATCGAGAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: EVTEVQEAEGDK*KPLPIIKDRER Trigger: CCGCTCTCGATCCTTAATAATGGGAAGGGGCTTCCACTTGTCGCCCTCCGCCTCCTGCACCTCAGTGACTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000499939.2 ENST00000565060.1 ENST00000661766.1 |
||
| CDS CAA 90 bp | AGTGGAAGCCCCTTCCCATTATTAAGGATCGAGAGCGGGCGTAATTaGGGATCTAACCCACGAGGCGGAACCACCAGGGCAATGGCGCAA | + |
|
Preference number: 6 (lower is better) Translates to: SGSPFPLLRIESGRN*GSNPRGGTTRAMAQ Trigger: TTGCGCCATTGCCCTGGTGGTTCCGCCTCGTGGGTTAGATCCCAAATTACGCCCGCTCTCGATCCTTAATAATGGGAAGGGGCTTCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000565060.1 ENST00000661766.1 |
||
| CDS GCA 72 bp | CAGGGGGTGCTGAGGCTGCTGTTTCCCTTGCTAGGCTaGATCCCTAGCTCTCAGACCAGGGATAGAATTCAA | + |
|
Preference number: 6 (lower is better) Translates to: QGVLRLLFPLLG*IPSSQTRDRIQ Trigger: TTGAATTCTATCCCTGGTCTGAGAGCTAGGGATGCAGCCTAGCAAGGGAAACAGCAGCCTCAGCACCCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565060.1 |
||
| CDS CAA 72 bp | CCCTTCCCATTATTAAGGATCGAGAGCGGGCGTAATTaGGGATCTAACCCACGAGGCGGAACCACCAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PFPLLRIESGRN*GSNPRGGTTRA Trigger: TGCCCTGGTGGTTCCGCCTCGTGGGTTAGATCCCAAATTACGCCCGCTCTCGATCCTTAATAATGGGAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000499939.2 ENST00000565060.1 ENST00000661766.1 |
||
| CDS TCA 72 bp | GCCCTGTCCAATCCGATTTCCCAGATGGAACCTCTGTaGGCATTGGGTGTGCATTCTTCCAGACCTCCCACT | + |
|
Preference number: 6 (lower is better) Translates to: ALSNPISQMEPL*ALGVHSSRPPT Trigger: AGTGGGAGGTCTGGAAGAATGCACACCCAATGCTCACAGAGGTTCCATCTGGGAAATCGGATTGGACAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566854.5 |
||
| CDS GCA 72 bp | GCAATGGCCCACACATGCCTGCAGATCTTGCTAAAATaGAGATTCCGCTTCAGTATGTCAGGGAGGGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: AMAHTCLQILLK*RFRFSMSGRGL Trigger: GAGGCCCCTCCCTGACATACTGAAGCGGAATCTGCATTTTAGCAAGATCTGCAGGCATGTGTGGGCCATTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566854.5 |
||
| CDS CCA 72 bp | GGCTGCCGACTTAGGCCATGGATGGGTGATGCTTCTTaGTCTACTAATAGGTGCTTGGCCTCATGGGCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: GCRLRPWMGDAS*STNRCLASWAV Trigger: AACTGCCCATGAGGCCAAGCACCTATTAGTAGACCAAGAAGCATCACCCATCCATGGCCTAAGTCGGCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566535.1 ENST00000566854.5 |
||
| CDS CCA 72 bp | GGATGGGTGATGCTTCTTGGTCTACTAATAGGTGCTTaGCCTCATGGGCAGTTCCGCAGTCTGTCTCCCACT | + |
|
Preference number: 6 (lower is better) Translates to: GWVMLLGLLIGA*PHGQFRSLSPT Trigger: AGTGGGAGACAGACTGCGGAACTGCCCATGAGGCCAAGCACCTATTAGTAGACCAAGAAGCATCACCCATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566535.1 |
||
| CDS CCA 72 bp | CTCAGTGACTTGCCCAAGCGCCTGCCAACTAGTAAGTaGCAGAGCCAGGATTCTAGATCAGGCTCTATGACC | + |
|
Preference number: 6 (lower is better) Translates to: LSDLPKRLPTSK*QSQDSRSGSMT Trigger: GGTCATAGAGCCTGATCTAGAATCCTGGCTCTGCCACTTACTAGTTGGCAGGCGCTTGGGCAAGTCACTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661766.1 |
||
| CDS CAA 72 bp | TGGATGGGTGATGCTTCTTGGTCTACTAATAGGTGCTaGGCCTCATGGGCAGTTCCGCAGTCTGTCTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: WMGDASWSTNRC*ASWAVPQSVSH Trigger: GTGGGAGACAGACTGCGGAACTGCCCATGAGGCCAAGCACCTATTAGTAGACCAAGAAGCATCACCCATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566535.1 |
||
| CDS GCA 72 bp | CGATTTCCCAGATGGAACCTCTGTGAGCATTGGGTGTaGATTCTTCCAGACCTCCCACTGTGTATCACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RFPRWNLCEHWV*ILPDLPLCITG Trigger: GCCAGTGATACACAGTGGGAGGTCTGGAAGAATGCACACCCAATGCTCACAGAGGTTCCATCTGGGAAATCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566854.5 |
||
| CDS GCA 72 bp | CTGAACTCCCAGACTCAGATGAGAACAATAGCTGGCTaGCGACTTAGGCCATGGATGGGTGATGCTTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LNSQTQMRTIAG*RLRPWMGDASW Trigger: CCAAGAAGCATCACCCATCCATGGCCTAAGTCGGCAGCCAGCTATTGTTCTCATCTGAGTCTGGGAGTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566535.1 ENST00000566854.5 |
||
| CDS CAA 90 bp | CTTAGGCCATGGATGGGTGATGCTTCTTGGTCTACTAATAGGTGCTaGGCCTCATGGGCAGTTCCGCAGTCTGTCTCCCACTGTGTATCA | + |
|
Preference number: 6 (lower is better) Translates to: LRPWMGDASWSTNRC*ASWAVPQSVSHCVS Trigger: TGATACACAGTGGGAGACAGACTGCGGAACTGCCCATGAGGCCAAGCACCTATTAGTAGACCAAGAAGCATCACCCATCCATGGCCTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566535.1 |
||
| CDS TCA 72 bp | ACGAGTAATTTCACTTGCTTTCTCACAATCCAGGCGTaGGCCACCGCGACCGGACCAGAGTCCACATTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: TSNFTCFLTIQA*ATATGPESTFL Trigger: CAAAAATGTGGACTCTGGTCCGGTCGCGGTGGCTCACGCCTGGATTGTGAGAAAGCAAGTGAAATTACTCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000499939.2 ENST00000565060.1 |
||
| CDS CCA 72 bp | GATGCTTCTTGGTCTACTAATAGGTGCTTGGCCTCATaGGCAGTTCCGCAGTCTGTCTCCCACTGTGTATCA | + |
|
Preference number: 6 (lower is better) Translates to: DASWSTNRCLAS*AVPQSVSHCVS Trigger: TGATACACAGTGGGAGACAGACTGCGGAACTGCCCATGAGGCCAAGCACCTATTAGTAGACCAAGAAGCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566535.1 |
||
| CDS GCA 72 bp | CGTCGCACTTCTTCTTCCCTCCTGATTAATTCAGGCTaGAATGGCCCACACATGCCTGCAGATCTTGCTAAA | + |
|
Preference number: 6 (lower is better) Translates to: RRTSSSLLINSG*NGPHMPADLAK Trigger: TTTAGCAAGATCTGCAGGCATGTGTGGGCCATTGCAGCCTGAATTAATCAGGAGGGAAGAAGAAGTGCGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566854.5 |
||
| CDS CCA 72 bp | CAGATGAGAACAATAGCTGGCTGCCGACTTAGGCCATaGATGGGTGATGCTTCTTGGTCTACTAATAGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: QMRTIAGCRLRP*MGDASWSTNRC Trigger: GCACCTATTAGTAGACCAAGAAGCATCACCCATCCATGGCCTAAGTCGGCAGCCAGCTATTGTTCTCATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566535.1 ENST00000566854.5 |
||
| CDS CAA 72 bp | ATTCAGGCTGCAATGGCCCACACATGCCTGCAGATCTaGCTAAAATGCAGATTCCGCTTCAGTATGTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: IQAAMAHTCLQI*LKCRFRFSMSG Trigger: CCCTGACATACTGAAGCGGAATCTGCATTTTAGCAAGATCTGCAGGCATGTGTGGGCCATTGCAGCCTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566854.5 |
||
| CDS TCA 72 bp | AAGATCACAGGGGTGGTGAGTGACCAAGCCTGGATTTaGTCTATCCTCACAGAGACAGATATTTGCAGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: KITGVVSDQAWI*SILTETDICRY Trigger: GTACCTGCAAATATCTGTCTCTGTGAGGATAGATCAAATCCAGGCTTGGTCACTCACCACCCCTGTGATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000499939.2 ENST00000661766.1 |
||
| CDS TCA 72 bp | TCAGAGACACTGAGTTTAAGGCCCAGGATTCCATGTTaGCCATCCAGCTCCAAAGCTGAAGCTTTTAATCAC | + |
|
Preference number: 6 (lower is better) Translates to: SETLSLRPRIPC*PSSSKAEAFNH Trigger: GTGATTAAAAGCTTCAGCTTTGGAGCTGGATGGTCAACATGGAATCCTGGGCCTTAAACTCAGTGTCTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000499939.2 ENST00000661766.1 |
||
| CDS CCA 72 bp | AAGATTAGAAATTATGGTTTAGGAGGTCACGCAAGCTaGAGGCTACAAGATTCTGACCCTCCCCAGATTGCT | + |
|
Preference number: 6 (lower is better) Translates to: KIRNYGLGGHAS*RLQDSDPPQIA Trigger: AGCAATCTGGGGAGGGTCAGAATCTTGTAGCCTCCAGCTTGCGTGACCTCCTAAACCATAATTTCTAATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000499939.2 |
||
| CDS CCA 72 bp | TATATATATTCAGTGAATGTTTCCCCGGATCTATTCTaGCCCTGTCCAATCCGATTTCCCAGATGGAACCTC | + |
|
Preference number: 6 (lower is better) Translates to: YIYSVNVSPDLF*PCPIRFPRWNL Trigger: GAGGTTCCATCTGGGAAATCGGATTGGACAGGGCCAGAATAGATCCGGGGAAACATTCACTGAATATATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566854.5 |
||
| CDS CAA 90 bp | ACTGAGAAAATTATGATAGTGAAAGAGATCTGGCCTGACTCCATCTaGCTTCTAACTTCCAAGCTGTCCTTGATCATTCCTGGACATAGG | + |
|
Preference number: 6 (lower is better) Translates to: TEKIMIVKEIWPDSI*LLTSKLSLIIPGHR Trigger: CCTATGTCCAGGAATGATCAAGGACAGCTTGGAAGTTAGAAGCAAGATGGAGTCAGGCCAGATCTCTTTCACTATCATAATTTTCTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000499939.2 |
||
| CDS CCA 72 bp | AACTTTCTCTATTGCAATTCCCCTGTCTTGATAAATTaGTTCTGTCTAGGAAGCAGGCAAGGAGAACCATTG | + |
|
Preference number: 6 (lower is better) Translates to: NFLYCNSPVLIN*FCLGSRQGEPL Trigger: CAATGGTTCTCCTTGCCTGCTTCCTAGACAGAACCAATTTATCAAGACAGGGGAATTGCAATAGAGAAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000499939.2 |
||
| CDS CAA 90 bp | GTCTTGATAAATTGGTTCTGTCTAGGAAGCAGGCAAGGAGAACCATaGGGTGCTTACAAAATGCGAGAATACTTGCATTTAACCTACACA | + |
|
Preference number: 6 (lower is better) Translates to: VLINWFCLGSRQGEP*GAYKMREYLHLTYT Trigger: TGTGTAGGTTAAATGCAAGTATTCTCGCATTTTGTAAGCACCCAATGGTTCTCCTTGCCTGCTTCCTAGACAGAACCAATTTATCAAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000499939.2 |
||
| CDS TCA 72 bp | AATAAAACTGTGGTCTCCTGTTCAGCCAGCTCTGTGTaGATTAAACTTTCTCTATTGCAATTCCCCTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: NKTVVSCSASSV*IKLSLLQFPCL Trigger: AAGACAGGGGAATTGCAATAGAGAAAGTTTAATTCACACAGAGCTGGCTGAACAGGAGACCACAGTTTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000499939.2 |
||
| CDS TCA 72 bp | ATCCTTGAAAACCCTGAATTTCCAGGGAGACTGATTTaGGTAATAATAAAACTGTGGTCTCCTGTTCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ILENPEFPGRLI*VIIKLWSPVQP Trigger: TGGCTGAACAGGAGACCACAGTTTTATTATTACTCAAATCAGTCTCCCTGGAAATTCAGGGTTTTCAAGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000499939.2 |
||
| CDS CCA 72 bp | AGCATAACTGAGAAAATTATGATAGTGAAAGAGATCTaGCCTGACTCCATCTTGCTTCTAACTTCCAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SITEKIMIVKEI*PDSILLLTSKL Trigger: CAGCTTGGAAGTTAGAAGCAAGATGGAGTCAGGCCAGATCTCTTTCACTATCATAATTTTCTCAGTTATGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000499939.2 |
||