RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NSL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000117697

Ensembl transcript IDs: ENST00000366976.3, ENST00000366977.8, ENST00000366978.5, ENST00000473995.5, ENST00000487995.1, ENST00000626725.1

Found 547 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTCCTCTCAGAGGCCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATaGCTGCCGAGAGAGGGAGGGCGGGCTCTGGGTCACCCAGCTTCA +
Preference number: 1 (lower is better)
Translates to: VLSEALQSSLLRPWR*LPREGGRALGHPAS
Trigger: TGAAGCTGGGTGACCCAGAGCCCGCCCTCCCTCTCTCGGCAGTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGGCCTCTGAGAGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR TCA 90 bp ACAGAGCCGAGCCCGGTCCCAGGGGCTGGATGGTGTCCCTCCCTCTaGTGGACACCAGCACAGCACGGACTTTCCCGTCCTGTCTCTTCA +
Preference number: 1 (lower is better)
Translates to: TEPSPVPGAGWCPSL*WTPAQHGLSRPVSS
Trigger: TGAAGAGACAGGACGGGAAAGTCCGTGCTGTGCTGGTGTCCATCAGAGGGAGGGACACCATCCAGCCCCTGGGACCGGGCTCGGCTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR GCA 90 bp TCTCAGAGGCCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACTaGCGAGAGAGGGAGGGCGGGCTCTGGGTCACCCAGCTTCATCCT +
Preference number: 1 (lower is better)
Translates to: SQRPSSPVYSGLGDD*REREGGLWVTQLHP
Trigger: AGGATGAAGCTGGGTGACCCAGAGCCCGCCCTCCCTCTCTCGGCAGTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGGCCTCTGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR GCA 90 bp TACTGGTTGGCACAGAAGCCTCCTCACTATCCCTGCCACTCTGGCTaGTCCAGCTCCATGTCCTGGGACACCCTACCCTGCCCCAGGACC +
Preference number: 1 (lower is better)
Translates to: YWLAQKPPHYPCHSG*SSSMSWDTLPCPRT
Trigger: GGTCCTGGGGCAGGGTAGGGTGTCCCAGGACATGGAGCTGGAGCAGCCAGAGTGGCAGGGATAGTGAGGAGGCTTCTGTGCCAACCAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CCA 90 bp GGGTCACTCTCCATGGTGTCCATGAGAGGCTGCCAGCCACCTCGGTaGGGTCCTCCCACAATCCTCCATGTGGCACGTGGGGATCTCCAA +
Preference number: 1 (lower is better)
Translates to: GSLSMVSMRGCQPPR*GPPTILHVARGDLQ
Trigger: TTGGAGATCCCCACGTGCCACATGGAGGATTGTGGGAGGACCCCACCGAGGTGGCTGGCAGCCTCTCATGGACACCATGGAGAGTGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR GCA 90 bp GAGGGAGGGCGGGCTCTGGGTCACCCAGCTTCATCCTCTTCATCTTaGCAGTTCACCAGAGGCAGAAGGGATGAAGGTTCCCCGATCCCC +
Preference number: 1 (lower is better)
Translates to: EGGRALGHPASSSSS*QFTRGRRDEGSPIP
Trigger: GGGGATCGGGGAACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGAAGCTGGGTGACCCAGAGCCCGCCCTCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR CCA 90 bp CCAGCCACCTCGGTGGGGTCCTCCCACAATCCTCCATGTGGCACGTaGGGATCTCCAAATGACTTCTGTGCAACAACAGAGCCGAGCCCG +
Preference number: 1 (lower is better)
Translates to: PATSVGSSHNPPCGT*GSPNDFCATTEPSP
Trigger: CGGGCTCGGCTCTGTTGTTGCACAGAAGTCATTTGGAGATCCCCACGTGCCACATGGAGGATTGTGGGAGGACCCCACCGAGGTGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR CCA 90 bp GTCCAGACCGCTGAGCCACTCTGCAGTCCTCAAATGCAGAGTGATTaGGTCACTCTCCATGGTGTCCATGAGAGGCTGCCAGCCACCTCG +
Preference number: 1 (lower is better)
Translates to: VQTAEPLCSPQMQSD*VTLHGVHERLPATS
Trigger: CGAGGTGGCTGGCAGCCTCTCATGGACACCATGGAGAGTGACCCAATCACTCTGCATTTGAGGACTGCAGAGTGGCTCAGCGGTCTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR TCA 90 bp CACCAGCACAGCACGGACTTTCCCGTCCTGTCTCTTCATGGTGGGTaGAGAGCACAGGGAGAGTGTGCTTCCTGGCTGTGTCCTCTCAGA +
Preference number: 1 (lower is better)
Translates to: HQHSTDFPVLSLHGG*RAQGECASWLCPLR
Trigger: TCTGAGAGGACACAGCCAGGAAGCACACTCTCCCTGTGCTCTTCACCCACCATGAAGAGACAGGACGGGAAAGTCCGTGCTGTGCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR GCA 90 bp AAATGCAGAGTGATTGGGTCACTCTCCATGGTGTCCATGAGAGGCTaGCAGCCACCTCGGTGGGGTCCTCCCACAATCCTCCATGTGGCA +
Preference number: 1 (lower is better)
Translates to: KCRVIGSLSMVSMRG*QPPRWGPPTILHVA
Trigger: TGCCACATGGAGGATTGTGGGAGGACCCCACCGAGGTGGCTGGCAGCCTCTCATGGACACCATGGAGAGTGACCCAATCACTCTGCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR CCA 90 bp TGGACACCAGCACAGCACGGACTTTCCCGTCCTGTCTCTTCATGGTaGGTGAAGAGCACAGGGAGAGTGTGCTTCCTGGCTGTGTCCTCT +
Preference number: 1 (lower is better)
Translates to: WTPAQHGLSRPVSSW*VKSTGRVCFLAVSS
Trigger: AGAGGACACAGCCAGGAAGCACACTCTCCCTGTGCTCTTCACCCACCATGAAGAGACAGGACGGGAAAGTCCGTGCTGTGCTGGTGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR CCA 90 bp TGTGGTCAGAAGGCCTCGCTCTGCTCTACATGGTCTATAGACCGCTaGGAAGGTGGCCAGGCACTTCCCTTCTCATCTCCACCTCTTTCT +
Preference number: 1 (lower is better)
Translates to: CGQKASLCSTWSIDR*EGGQALPFSSPPLS
Trigger: AGAAAGAGGTGGAGATGAGAAGGGAAGTGCCTGGCCACCTTCCCAGCGGTCTATAGACCATGTAGAGCAGAGCGAGGCCTTCTGACCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR GCA 90 bp TCCTCTTCAATGTCCAGACCGCTGAGCCACTCTGCAGTCCTCAAATaGAGAGTGATTGGGTCACTCTCCATGGTGTCCATGAGAGGCTGC +
Preference number: 1 (lower is better)
Translates to: SSSMSRPLSHSAVLK*RVIGSLSMVSMRGC
Trigger: GCAGCCTCTCATGGACACCATGGAGAGTGACCCAATCACTCTGCATTTGAGGACTGCAGAGTGGCTCAGCGGTCTGGACATTGAAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR GCA 90 bp CTGCTGTTTATCAAGATGGCATATGGGTGTAGGGAGAAGAAGAGGTaGTGGAGCCATCTATCCAGGTCCCTGTACTCTCTCTGGCCCTCT +
Preference number: 1 (lower is better)
Translates to: LLFIKMAYGCREKKR*WSHLSRSLYSLWPS
Trigger: AGAGGGCCAGAGAGAGTACAGGGACCTGGATAGATGGCTCCAGCACCTCTTCTTCTCCCTACACCCATATGCCATCTTGATAAACAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR TCA 90 bp TTTCCCTCTAATGGATCCCTAGATGCTACTGATGGCTCCCCTAACTaGCGGCAAATTGCTTGTGGGCAGGGTCTGTGCCTTGGTTTACAG +
Preference number: 1 (lower is better)
Translates to: FPSNGSLDATDGSPN*RQIACGQGLCLGLQ
Trigger: CTGTAAACCAAGGCACAGACCCTGCCCACAAGCAATTTGCCGTCAGTTAGGGGAGCCATCAGTAGCATCTAGGGATCCATTAGAGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CCA 90 bp CTGTCCACCTTGTCTCTGGGCACATCTGATGATAACGTCTGTGGCTaGTTTATTGAATTTGTTCTAGGCTTGTGTCCCCCACCGACCACC +
Preference number: 1 (lower is better)
Translates to: LSTLSLGTSDDNVCG*FIEFVLGLCPPPTT
Trigger: GGTGGTCGGTGGGGGACACAAGCCTAGAACAAATTCAATAAACCAGCCACAGACGTTATCATCAGATGTGCCCAGAGACAAGGTGGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR CCA 90 bp GCTGGTGTTCAGACAGTCACACTGTTACAAACATATGGATTGTACTaGTTGGCACAGAAGCCTCCTCACTATCCCTGCCACTCTGGCTGC +
Preference number: 1 (lower is better)
Translates to: AGVQTVTLLQTYGLY*LAQKPPHYPCHSGC
Trigger: GCAGCCAGAGTGGCAGGGATAGTGAGGAGGCTTCTGTGCCAACCAGTACAATCCATATGTTTGTAACAGTGTGACTGTCTGAACACCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CCA 90 bp CCAAGTCTCAGGTATTTATGGACTGGTGAAGAGTTGTGTGGAGGGTaGCATTCCCATCAAGGTGGCATCAGGGGCAGAAATGGACAAAAG +
Preference number: 1 (lower is better)
Translates to: PSLRYLWTGEELCGG*HSHQGGIRGRNGQK
Trigger: CTTTTGTCCATTTCTGCCCCTGATGCCACCTTGATGGGAATGCCACCCTCCACACAACTCTTCACCAGTCCATAAATACCTGAGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR TCA 90 bp CCATCAAGGTGGCATCAGGGGCAGAAATGGACAAAAGAACTCCAATaGCATCATTGTAGAAGATGTGGGCCACAGAGCTACATGAATGGG +
Preference number: 1 (lower is better)
Translates to: PSRWHQGQKWTKELQ*HHCRRCGPQSYMNG
Trigger: CCCATTCATGTAGCTCTGTGGCCCACATCTTCTACAATGATGTCATTGGAGTTCTTTTGTCCATTTCTGCCCCTGATGCCACCTTGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CCA 90 bp CCATGTCAAAGCTGGTGTTCAGACAGTCACACTGTTACAAACATATaGATTGTACTGGTTGGCACAGAAGCCTCCTCACTATCCCTGCCA +
Preference number: 1 (lower is better)
Translates to: PCQSWCSDSHTVTNI*IVLVGTEASSLSLP
Trigger: TGGCAGGGATAGTGAGGAGGCTTCTGTGCCAACCAGTACAATCCATATGTTTGTAACAGTGTGACTGTCTGAACACCAGCTTTGACATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CCA 90 bp CCACTATGCATCGAGGGCCCATCATGTGCCAGCAATTATTCCAGGTaGATGGAACAAAGATTCCTGCCATTAAGGGACTTACAGTTTTTG +
Preference number: 1 (lower is better)
Translates to: PLCIEGPSCASNYSR*MEQRFLPLRDLQFL
Trigger: CAAAAACTGTAAGTCCCTTAATGGCAGGAATCTTTGTTCCATCCACCTGGAATAATTGCTGGCACATGATGGGCCCTCGATGCATAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CCA 90 bp GAGGGATGTCAATGCCATCCTCTGCTCTTATGTCCTGCAGGGATATaGGAATTAGACTTAGTTCTAGTAGACGTAGTTCTAGTAGACAGG +
Preference number: 1 (lower is better)
Translates to: EGCQCHPLLLCPAGI*ELDLVLVDVVLVDR
Trigger: CCTGTCTACTAGAACTACGTCTACTAGAACTAAGTCTAATTCCCATATCCCTGCAGGACATAAGAGCAGAGGATGGCATTGACATCCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CCA 90 bp TGGGAAGACTTGGTATTTTTCAGATTTCCCTGCTGTTTATCAAGATaGCATATGGGTGTAGGGAGAAGAAGAGGTGCTGGAGCCATCTAT +
Preference number: 1 (lower is better)
Translates to: WEDLVFFRFPCCLSR*HMGVGRRRGAGAIY
Trigger: ATAGATGGCTCCAGCACCTCTTCTTCTCCCTACACCCATATGCCATCTTGATAAACAGCAGGGAAATCTGAAAAATACCAAGTCTTCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR TCA 90 bp AAATCTGCAACTAGGTATGAGCCCAAAGGCACTGGAGCCATTCTCTaGGTAAGGCTAGTCAAGGTGATGATAGAAATGCCCAATCTTTTA +
Preference number: 1 (lower is better)
Translates to: KSATRYEPKGTGAIL*VRLVKVMIEMPNLL
Trigger: TAAAAGATTGGGCATTTCTATCATCACCTTGACTAGCCTTACTCAGAGAATGGCTCCAGTGCCTTTGGGCTCATACCTAGTTGCAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR TCA 90 bp ACTTCCTCAGGATCAGAGGCAGGCACACAGGGCATAGACAGAATATaGCAAGTCAGAGAGAATTCGAACACTTATTTTAACCTTTTCACC +
Preference number: 1 (lower is better)
Translates to: TSSGSEAGTQGIDRI*QVRENSNTYFNLFT
Trigger: GGTGAAAAGGTTAAAATAAGTGTTCGAATTCTCTCTGACTTGTCATATTCTGTCTATGCCCTGTGTGCCTGCCTCTGATCCTGAGGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR GCA 90 bp GTAACACTGTCCCTATGGGAAGACTTGGTATTTTTCAGATTTCCCTaGTGTTTATCAAGATGGCATATGGGTGTAGGGAGAAGAAGAGGT +
Preference number: 1 (lower is better)
Translates to: VTLSLWEDLVFFRFP*CLSRWHMGVGRRRG
Trigger: ACCTCTTCTTCTCCCTACACCCATATGCCATCTTGATAAACAGCAGGGAAATCTGAAAAATACCAAGTCTTCCCATAGGGACAGTGTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR CCA 90 bp TTTGCTGCATGGCATTATCATTGTTTGCACACTCATCCTCTTCACTaGAATATGACCTTCCTGAAGGCAACACTTGTCCTGAGTGTTTTC +
Preference number: 1 (lower is better)
Translates to: FAAWHYHCLHTHPLH*NMTFLKATLVLSVF
Trigger: GAAAACACTCAGGACAAGTGTTGCCTTCAGGAAGGTCATATTCCAGTGAAGAGGATGAGTGTGCAAACAATGATAATGCCATGCAGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CCA 90 bp TTAGACTTAGTTCTAGTAGACGTAGTTCTAGTAGACAGGAGACTCTaGAGTCCTAATTCAGGTCAGTTTCCCAGTGATCTGTCCTCAGTT +
Preference number: 1 (lower is better)
Translates to: LDLVLVDVVLVDRRL*SPNSGQFPSDLSSV
Trigger: AACTGAGGACAGATCACTGGGAAACTGACCTGAATTAGGACTCCAGAGTCTCCTGTCTACTAGAACTACGTCTACTAGAACTAAGTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CCA 90 bp CTTATCTGCACATCACTTATACCATTTGGTGAGATCTCTGGAGAATaGAACACCTTCACAGACAACATCAGGGATAAACCTGATCACCGT +
Preference number: 1 (lower is better)
Translates to: LICTSLIPFGEISGE*NTFTDNIRDKPDHR
Trigger: ACGGTGATCAGGTTTATCCCTGATGTTGTCTGTGAAGGTGTTCCATTCTCCAGAGATCTCACCAAATGGTATAAGTGATGTGCAGATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR GCA 90 bp GACTACTCCCCTAAGTTCCACACATACATCTATCATACCATTTGCTaGATGGCATTATCATTGTTTGCACACTCATCCTCTTCACTGGAA +
Preference number: 1 (lower is better)
Translates to: DYSPKFHTYIYHTIC*MALSLFAHSSSSLE
Trigger: TTCCAGTGAAGAGGATGAGTGTGCAAACAATGATAATGCCATGCAGCAAATGGTATGATAGATGTATGTGTGGAACTTAGGGGAGTAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CCA 90 bp TGGTGTGGTTTCTATCTGTGTTATAAAGTTCTCAGGTTTAGCATCTaGTTTCCTATGACAACTGGAAAAGACTTCTTGGTGAATCCTCTG +
Preference number: 1 (lower is better)
Translates to: WCGFYLCYKVLRFSI*FPMTTGKDFLVNPL
Trigger: CAGAGGATTCACCAAGAAGTCTTTTCCAGTTGTCATAGGAAACCAGATGCTAAACCTGAGAACTTTATAACACAGATAGAAACCACACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366976.3
3UTR CCA 90 bp CAAGCCAATTATTCAAACAGTTTTTGGGAGGTAACACTGTCCCTATaGGAAGACTTGGTATTTTTCAGATTTCCCTGCTGTTTATCAAGA +
Preference number: 1 (lower is better)
Translates to: QANYSNSFWEVTLSL*EDLVFFRFPCCLSR
Trigger: TCTTGATAAACAGCAGGGAAATCTGAAAAATACCAAGTCTTCCCATAGGGACAGTGTTACCTCCCAAAAACTGTTTGAATAATTGGCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR CCA 90 bp CAGTTCTACAATTCACGCTATTTATTAATGGCCTTTTACCCAATCTaGGACACTATTACAGTTGTGGCTTTACTCAATCTCTTCCTTTTC +
Preference number: 1 (lower is better)
Translates to: QFYNSRYLLMAFYPI*DTITVVALLNLFLF
Trigger: GAAAAGGAAGAGATTGAGTAAAGCCACAACTGTAATAGTGTCCCAGATTGGGTAAAAGGCCATTAATAAATAGCGTGAATTGTAGAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR TCA 90 bp CTTTGGGTAATCTTTTATCTTGAACTACCAAGAGTAGATGAATTGTaGGCTCATATAGCTGGAACAAATCTGACATTGTTGGTTTGTTCA +
Preference number: 1 (lower is better)
Translates to: LWVIFYLELPRVDEL*AHIAGTNLTLLVCS
Trigger: TGAACAAACCAACAATGTCAGATTTGTTCCAGCTATATGAGCTCACAATTCATCTACTCTTGGTAGTTCAAGATAAAAGATTACCCAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR GCA 90 bp CAGACTTTCTTGCTTTTAATCCTTAGCTTACTAGTTCTTGGCCTATaGAGAAATGCAACTTCTCCTCTTACACAGTATACTTATTCAATA +
Preference number: 1 (lower is better)
Translates to: QTFLLLILSLLVLGL*RNATSPLTQYTYSI
Trigger: TATTGAATAAGTATACTGTGTAAGAGGAGAAGTTGCATTTCTGCATAGGCCAAGAACTAGTAAGCTAAGGATTAAAAGCAAGAAAGTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR GCA 90 bp AGTTTTGCCCATTCTGTGATTCCATACACAGGATGTATTCTCTTGTaGCTGGCTTTGCTTCTTTTATTCAATATAGTATCTTTGATATTG +
Preference number: 1 (lower is better)
Translates to: SFAHSVIPYTGCILL*LALLLLFNIVSLIL
Trigger: CAATATCAAAGATACTATATTGAATAAAAGAAGCAAAGCCAGGCACAAGAGAATACATCCTGTGTATGGAATCACAGAATGGGCAAAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR GCA 90 bp CTGCATTATCTCTTTGATAATTTTGACTCTGCTGCTTTTTCTGCATaGTATCTCTGGAATGGGTATCGATTAGACTTTGAACTTTATGAA +
Preference number: 1 (lower is better)
Translates to: LHYLFDNFDSAAFSA*YLWNGYRLDFELYE
Trigger: TTCATAAAGTTCAAAGTCTAATCGATACCCATTCCAGAGATAGCATGCAGAAAAAGCAGCAGAGTCAAAATTATCAAAGAGATAATGCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CCA 90 bp CTCTTTGATAATTTTGACTCTGCTGCTTTTTCTGCATGCTATCTCTaGAATGGGTATCGATTAGACTTTGAACTTTATGAACTTATTCTC +
Preference number: 1 (lower is better)
Translates to: LFDNFDSAAFSACYL*NGYRLDFELYELIL
Trigger: GAGAATAAGTTCATAAAGTTCAAAGTCTAATCGATACCCATTCCAGAGATAGCATGCAGAAAAAGCAGCAGAGTCAAAATTATCAAAGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR CCA 90 bp GAGGCTGCCAGCCACCTCGGTGGGGTCCTCCCACAATCCTCCATGTGGCACGTGCCCGGTCCCAGGGGCTaGATGGTGTCCCTCCCTCTG +
Preference number: 2 (lower is better)
Translates to: EAASHLGGVLPQSSMWHVPGPRG*MVSLPL
Trigger: CAGAGGGAGGGACACCATCCAGCCCCTGGGACCGGG...CACGTGCCACATGGAGGATTGTGGGAGGACCCCACCGAGGTGGCTGGCAGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR-3UTR CCA 90 bp CCACCGACCACCTGGCTCATCTCAGCTCCCAGCGGCACTGTGTTACCCCTGAGGCCCGGTCCCAGGGGCTaGATGGTGTCCCTCCCTCTG +
Preference number: 2 (lower is better)
Translates to: PPTTWLISAPSGTVLPLRPGPRG*MVSLPL
Trigger: CAGAGGGAGGGACACCATCCAGCCCCTGGGACCGGG...CCTCAGGGGTAACACAGTGCCGCTGGGAGCTGAGATGAGCCAGGTGGTCGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR-3UTR CCA 90 bp GTGTCCTCTCAGAGGCCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACTGCAGGGAGGGCGGGCTCTaGGTCACCCAGCTTCATCCT +
Preference number: 2 (lower is better)
Translates to: VSSQRPSSPVYSGLGDDCREGGL*VTQLHP
Trigger: AGGATGAAGCTGGGTGACCCAGAGCCCGCCCTCCCT...GCAGTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGGCCTCTGAGAGGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR-3UTR TCA 90 bp GAGAGGCTGCCAGCCACCTCGGTGGGGTCCTCCCACAATCCTCCATGTGGCACGTCTCTTCATGGTGGGTaGAGAGCACAGGGAGAGTGT +
Preference number: 2 (lower is better)
Translates to: ERLPATSVGSSHNPPCGTSLHGG*RAQGEC
Trigger: ACACTCTCCCTGTGCTCTTCACCCACCATGAAGAGA...CGTGCCACATGGAGGATTGTGGGAGGACCCCACCGAGGTGGCTGGCAGCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR-3UTR GCA 90 bp ATTTGTTCTAGGCTTGTGTCCCCCACCGACCACCTGGCTCATCTCAGCTCCCAGGGCCTTGGAGATGACTaGCGAGAGAGGGAGGGCGGG +
Preference number: 2 (lower is better)
Translates to: ICSRLVSPTDHLAHLSSQGLGDD*REREGG
Trigger: CCCGCCCTCCCTCTCTCGGCAGTCATCTCCAAGGCC...CTGGGAGCTGAGATGAGCCAGGTGGTCGGTGGGGGACACAAGCCTAGAACAAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR-3UTR CCA 90 bp TGCCAGCCACCTCGGTGGGGTCCTCCCACAATCCTCCATGTGGCACGTGGGGATCGTCCTGTCTCTTCATaGTGGGTGAAGAGCACAGGG +
Preference number: 2 (lower is better)
Translates to: CQPPRWGPPTILHVARGDRPVSS*WVKSTG
Trigger: CCCTGTGCTCTTCACCCACCATGAAGAGACAGGACG...ATCCCCACGTGCCACATGGAGGATTGTGGGAGGACCCCACCGAGGTGGCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR-3UTR TCA 90 bp GTTGGCTCCTCTTCAATGTCCAGACCGCTGAGCCACTCTGCAGTCCTCAAATGCTGGTGTCCCTCCCTCTaGTGGACACCAGCACAGCAC +
Preference number: 2 (lower is better)
Translates to: VGSSSMSRPLSHSAVLKCWCPSL*WTPAQH
Trigger: GTGCTGTGCTGGTGTCCATCAGAGGGAGGGACACCA...GCATTTGAGGACTGCAGAGTGGCTCAGCGGTCTGGACATTGAAGAGGAGCCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR-3UTR CCA 90 bp CCCTCTGATGGACACCAGCACAGCACGGACTTTCCCGTCCTGTCTCTTCATGGTGGAGAGTGTGCTTCCTaGCTGTGTCCTCTCAGAGGC +
Preference number: 2 (lower is better)
Translates to: PSDGHQHSTDFPVLSLHGGECAS*LCPLRG
Trigger: GCCTCTGAGAGGACACAGCCAGGAAGCACACTCTCC...ACCATGAAGAGACAGGACGGGAAAGTCCGTGCTGTGCTGGTGTCCATCAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR-3UTR CCA 90 bp TTTGTTCTAGGCTTGTGTCCCCCACCGACCACCTGGCTCATCTCAGCTCCCAGCCCTCCATGTGGCACGTaGGGATCTCCAAATGACTTC +
Preference number: 2 (lower is better)
Translates to: FVLGLCPPPTTWLISAPSPPCGT*GSPNDF
Trigger: GAAGTCATTTGGAGATCCCCACGTGCCACATGGAGG...GCTGGGAGCTGAGATGAGCCAGGTGGTCGGTGGGGGACACAAGCCTAGAACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR-3UTR TCA 90 bp GGAGGTGGTCATCTACAAGTCGGGAAGACAGCCCTCACCAGAAACTGCATTTGCCAATGTCCAGACCGCTaGGCCACTCTGCAGTCCTCA +
Preference number: 2 (lower is better)
Translates to: GGGHLQVGKTALTRNCICQCPDR*ATLQSS
Trigger: TGAGGACTGCAGAGTGGCTCAGCGGTCTGGACATTG...GCAAATGCAGTTTCTGGTGAGGGCTGTCTTCCCGACTTGTAGATGACCACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR GCA 90 bp CAGCTTCATCCTCTTCATCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGTTGTGTCCATGAGAGGCTaGCAGCCACCTCGGTGGGGT +
Preference number: 2 (lower is better)
Translates to: QLHPLHLASSPEAEGMKVVSMRG*QPPRWG
Trigger: ACCCCACCGAGGTGGCTGGCAGCCTCTCATGGACAC...AACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR-3UTR CCA 90 bp ATTTGTTCTAGGCTTGTGTCCCCCACCGACCACCTGGCTCATCTCAGCTCCCAGCCTCCATGTGGCACGTaGGGATCTCCAAATGACTTC +
Preference number: 2 (lower is better)
Translates to: ICSRLVSPTDHLAHLSSQPPCGT*GSPNDF
Trigger: GAAGTCATTTGGAGATCCCCACGTGCCACATGGAGG...CTGGGAGCTGAGATGAGCCAGGTGGTCGGTGGGGGACACAAGCCTAGAACAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR-3UTR TCA 90 bp CAGCTTCATCCTCTTCATCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGTTTCTCCATGGTGTCCATaGGAGGCTGCCAGCCACCTC +
Preference number: 2 (lower is better)
Translates to: QLHPLHLASSPEAEGMKVSPWCP*EAASHL
Trigger: GAGGTGGCTGGCAGCCTCTCATGGACACCATGGAGA...AACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR-3UTR CCA 90 bp TCAATGTCCAGACCGCTGAGCCACTCTGCAGTCCTCAAATGCAGAGTGATTGGGCGTCCTGTCTCTTCATaGTGGGTGAAGAGCACAGGG +
Preference number: 2 (lower is better)
Translates to: SMSRPLSHSAVLKCRVIGRPVSS*WVKSTG
Trigger: CCCTGTGCTCTTCACCCACCATGAAGAGACAGGACG...CCCAATCACTCTGCATTTGAGGACTGCAGAGTGGCTCAGCGGTCTGGACATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR CAA 90 bp TCTGATGATAACGTCTGTGGCTGGTTTATTGAATTTGTTCTAGGCTaGTGTCCCCCACCGACCACCTGGCTCATCTCAGCTCCCAGCGGC +
Preference number: 2 (lower is better)
Translates to: SDDNVCGWFIEFVLG*CPPPTTWLISAPSG
Trigger: GCCGCTGGGAGCTGAGATGAGCCAGGTGGTCGGTGGGGGACACAAGCCTAGAACAAATTCAATAAACCAGCCACAGACGTTATCATCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR CAA 90 bp CTCTCTCTGGCCCTCTGGTCTCCACAGCAAATGCCCCTGTCCACCTaGTCTCTGGGCACATCTGATGATAACGTCTGTGGCTGGTTTATT +
Preference number: 2 (lower is better)
Translates to: LSLALWSPQQMPLST*SLGTSDDNVCGWFI
Trigger: AATAAACCAGCCACAGACGTTATCATCAGATGTGCCCAGAGACAAGGTGGACAGGGGCATTTGCTGTGGAGACCAGAGGGCCAGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR-3UTR CCA 90 bp TCAATGTCCAGACCGCTGAGCCACTCTGCAGTCCTCAAATGCAGAGTGATTGGGCCTGTCTCTTCATGGTaGGTGAAGAGCACAGGGAGA +
Preference number: 2 (lower is better)
Translates to: SMSRPLSHSAVLKCRVIGPVSSW*VKSTGR
Trigger: TCTCCCTGTGCTCTTCACCCACCATGAAGAGACAGG...CCCAATCACTCTGCATTTGAGGACTGCAGAGTGGCTCAGCGGTCTGGACATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR-3UTR CCA 90 bp AATGTCCAGACCGCTGAGCCACTCTGCAGTCCTCAAATGCAGAGTGATTGGGTCCCACAATCCTCCATGTaGCACGTGGGGATCTCCAAA +
Preference number: 2 (lower is better)
Translates to: NVQTAEPLCSPQMQSDWVPQSSM*HVGISK
Trigger: TTTGGAGATCCCCACGTGCCACATGGAGGATTGTGG...GACCCAATCACTCTGCATTTGAGGACTGCAGAGTGGCTCAGCGGTCTGGACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR-3UTR GCA 90 bp GTGCTCTTAAGATCTCTGACTTTTGATCCGAGTAGGTGTCCAACTGTATGTGTTGGCCTTGGAGATGACTaGCGAGAGAGGGAGGGCGGG +
Preference number: 2 (lower is better)
Translates to: VLLRSLTFDPSRCPTVCVGLGDD*REREGG
Trigger: CCCGCCCTCCCTCTCTCGGCAGTCATCTCCAAGGCC...AACACATACAGTTGGACACCTACTCGGATCAAAAGTCAGAGATCTTAAGAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR GCA 90 bp GGAGGTGGTCATCTACAAGTCGGGAAGACAGCCCTCACCAGAAACTGCATTTGCGGGACTACAGGTGTGTaGCATCACACCCTGCTAATT +
Preference number: 2 (lower is better)
Translates to: GGGHLQVGKTALTRNCICGTTGV*HHTLLI
Trigger: AATTAGCAGGGTGTGATGGCACACACCTGTAGTCCC...GCAAATGCAGTTTCTGGTGAGGGCTGTCTTCCCGACTTGTAGATGACCACCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR GCA 90 bp TCTGACTCGAGGAGGGCCCTCAGCGCAGAGAAAATTAAGTCTAGTGTTTGCAGGAGACACCAGAGAGCTTaGACTCTGTCCCTCTCTCCA +
Preference number: 2 (lower is better)
Translates to: SDSRRALSAEKIKSSVCRRHQRA*TLSLSP
Trigger: TGGAGAGAGGGACAGAGTGCAAGCTCTCTGGTGTCT...CCTGCAAACACTAGACTTAATTTTCTCTGCGCTGAGGGCCCTCCTCGAGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR TCA 90 bp ACCAAAGGAAAAGGTGATCAGAAGGCAACTATACCTGCTAGCACAGTGATGTCATGGTGTCCCTCCCTCTaGTGGACACCAGCACAGCAC +
Preference number: 2 (lower is better)
Translates to: TKGKGDQKATIPASTVMSWCPSL*WTPAQH
Trigger: GTGCTGTGCTGGTGTCCATCAGAGGGAGGGACACCA...TGACATCACTGTGCTAGCAGGTATAGTTGCCTTCTGATCACCTTTTCCTTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR GCA 90 bp TTGGTGAGATCTCTGGAGAATGGAACACCTTCACAGACAACATCAGGGATAAACGCCATCCTGGCTCACTaGAACTTCTGCCTCCAGGGC +
Preference number: 2 (lower is better)
Translates to: LVRSLENGTPSQTTSGINAILAH*NFCLQG
Trigger: GCCCTGGAGGCAGAAGTTGCAGTGAGCCAGGATGGC...GTTTATCCCTGATGTTGTCTGTGAAGGTGTTCCATTCTCCAGAGATCTCACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR CCA 90 bp ATCTGCACATCACTTATACCATTTGGTGAGATCTCTGGAGAATGGAACACCTTCCAAGACTGGGAGTGCTaGGGGTGGGGAGGCCAGAGT +
Preference number: 2 (lower is better)
Translates to: ICTSLIPFGEISGEWNTFQDWEC*GWGGQS
Trigger: ACTCTGGCCTCCCCACCCCCAGCACTCCCAGTCTTG...GAAGGTGTTCCATTCTCCAGAGATCTCACCAAATGGTATAAGTGATGTGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CAA 90 bp AAAAGAAATGCGCCAAGTCTCAGGTATTTATGGACTGGTGAAGAGTaGTGTGGAGGGTGGCATTCCCATCAAGGTGGCATCAGGGGCAGA +
Preference number: 2 (lower is better)
Translates to: KRNAPSLRYLWTGEE*CGGWHSHQGGIRGR
Trigger: TCTGCCCCTGATGCCACCTTGATGGGAATGCCACCCTCCACACAACTCTTCACCAGTCCATAAATACCTGAGACTTGGCGCATTTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CAA 90 bp GCTCCCCTAACTGACGGCAAATTGCTTGTGGGCAGGGTCTGTGCCTaGGTTTACAGGTGTACATCCACACAGCTCTTAGCACAGTATTTA +
Preference number: 2 (lower is better)
Translates to: APLTDGKLLVGRVCA*VYRCTSTQLLAQYL
Trigger: TAAATACTGTGCTAAGAGCTGTGTGGATGTACACCTGTAAACCAAGGCACAGACCCTGCCCACAAGCAATTTGCCGTCAGTTAGGGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR TCA 90 bp TTGGTGAGATCTCTGGAGAATGGAACACCTTCACAGACAACATCAGGGATAAACAGAAACGCAGGGTGCTaGCCCACCATCCAACTGAAG +
Preference number: 2 (lower is better)
Translates to: LVRSLENGTPSQTTSGINRNAGC*PTIQLK
Trigger: CTTCAGTTGGATGGTGGGTCAGCACCCTGCGTTTCT...GTTTATCCCTGATGTTGTCTGTGAAGGTGTTCCATTCTCCAGAGATCTCACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR GCA 90 bp TTCCAAACCCATGAGTTTCACTCTCAGGTTCCCTCTAGGAGCAGAAGTGCAGGTTCATCCTCTTCATCTTaGCAGTTCACCAGAGGCAGA +
Preference number: 2 (lower is better)
Translates to: FQTHEFHSQVPSRSRSAGSSSSS*QFTRGR
Trigger: TCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGA...ACCTGCACTTCTGCTCCTAGAGGGAACCTGAGAGTGAAACTCATGGGTTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR CCA 90 bp GTGCTCTTAAGATCTCTGACTTTTGATCCGAGTAGGTGTCCAACTGTATGTGTTGGAGAGTGTGCTTCCTaGCTGTGTCCTCTCAGAGGC +
Preference number: 2 (lower is better)
Translates to: VLLRSLTFDPSRCPTVCVGECAS*LCPLRG
Trigger: GCCTCTGAGAGGACACAGCCAGGAAGCACACTCTCC...AACACATACAGTTGGACACCTACTCGGATCAAAAGTCAGAGATCTTAAGAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR CCA 90 bp TTCCAAACCCATGAGTTTCACTCTCAGGTTCCCTCTAGGAGCAGAAGTGCAGGTCAAATGCAGAGTGATTaGGTCACTCTCCATGGTGTC +
Preference number: 2 (lower is better)
Translates to: FQTHEFHSQVPSRSRSAGQMQSD*VTLHGV
Trigger: GACACCATGGAGAGTGACCCAATCACTCTGCATTTG...ACCTGCACTTCTGCTCCTAGAGGGAACCTGAGAGTGAAACTCATGGGTTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR CCA 90 bp ACCAAAGGAAAAGGTGATCAGAAGGCAACTATACCTGCTAGCACAGTGATGTCACTCATTTCAGCCTCCTaGGTGGCTGGGACTACAGGT +
Preference number: 2 (lower is better)
Translates to: TKGKGDQKATIPASTVMSLISAS*VAGTTG
Trigger: ACCTGTAGTCCCAGCCACCCAGGAGGCTGAAATGAG...TGACATCACTGTGCTAGCAGGTATAGTTGCCTTCTGATCACCTTTTCCTTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR CCA 90 bp TTCCAAACCCATGAGTTTCACTCTCAGGTTCCCTCTAGGAGCAGAAGTGCAGGTATGGATTGTACTGGTTaGCACAGAAGCCTCCTCACT +
Preference number: 2 (lower is better)
Translates to: FQTHEFHSQVPSRSRSAGMDCTG*HRSLLT
Trigger: AGTGAGGAGGCTTCTGTGCCAACCAGTACAATCCAT...ACCTGCACTTCTGCTCCTAGAGGGAACCTGAGAGTGAAACTCATGGGTTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR CCA 90 bp TCTGACTCGAGGAGGGCCCTCAGCGCAGAGAAAATTAAGTCTAGTGTTTGCAGGCAGAGTCCACCACTCTaGCAAAGAGCAGTGTTTATT +
Preference number: 2 (lower is better)
Translates to: SDSRRALSAEKIKSSVCRQSPPL*QRAVFI
Trigger: AATAAACACTGCTCTTTGCCAGAGTGGTGGACTCTG...CCTGCAAACACTAGACTTAATTTTCTCTGCGCTGAGGGCCCTCCTCGAGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CAA 90 bp GTCAAAGCTGGTGTTCAGACAGTCACACTGTTACAAACATATGGATaGTACTGGTTGGCACAGAAGCCTCCTCACTATCCCTGCCACTCT +
Preference number: 2 (lower is better)
Translates to: VKAGVQTVTLLQTYG*YWLAQKPPHYPCHS
Trigger: AGAGTGGCAGGGATAGTGAGGAGGCTTCTGTGCCAACCAGTACAATCCATATGTTTGTAACAGTGTGACTGTCTGAACACCAGCTTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR GCA 90 bp CAGCTTCATCCTCTTCATCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGTTCACACCCCACCTTACTaGTTTAACCAATGTCCATCT +
Preference number: 2 (lower is better)
Translates to: QLHPLHLASSPEAEGMKVHTPPY*FNQCPS
Trigger: AGATGGACATTGGTTAAAGCAGTAAGGTGGGGTGTG...AACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR GCA 90 bp ATCTGCACATCACTTATACCATTTGGTGAGATCTCTGGAGAATGGAACACCTTCGACCTGGAGCAGGGGTaGCCTACAACTTTGCCCATT +
Preference number: 2 (lower is better)
Translates to: ICTSLIPFGEISGEWNTFDLEQG*PTTLPI
Trigger: AATGGGCAAAGTTGTAGGGCACCCCTGCTCCAGGTC...GAAGGTGTTCCATTCTCCAGAGATCTCACCAAATGGTATAAGTGATGTGCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR CCA 90 bp GTGAATCCTCTGGAGGTGGATAACAGGCTGCATCCTGAGAACTTGGGAAAATCCTGCATCCTGAGAACTTaGGAAAATCCCTCTCCTTGT +
Preference number: 2 (lower is better)
Translates to: VNPLEVDNRLHPENLGKSCILRT*ENPSPC
Trigger: ACAAGGAGAGGGATTTTCCCAAGTTCTCAGGATGCA...GGATTTTCCCAAGTTCTCAGGATGCAGCCTGTTATCCACCTCCAGAGGATTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366976.3
ENST00000626725.1
3UTR CAA 90 bp CTCAGGTTTAGCATCTGGTTTCCTATGACAACTGGAAAAGACTTCTaGGTGAATCCTCTGGAGGTGGATAACAGGCTGCATCCTGAGAAC +
Preference number: 2 (lower is better)
Translates to: LRFSIWFPMTTGKDF*VNPLEVDNRLHPEN
Trigger: GTTCTCAGGATGCAGCCTGTTATCCACCTCCAGAGGATTCACCAAGAAGTCTTTTCCAGTTGTCATAGGAAACCAGATGCTAAACCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366976.3
3UTR-3UTR TCA 90 bp TTGGTGAGATCTCTGGAGAATGGAACACCTTCACAGACAACATCAGGGATAAACTCCTCAAATGCAGAGTaGTTGGGTCACTCTCCATGG +
Preference number: 2 (lower is better)
Translates to: LVRSLENGTPSQTTSGINSSNAE*LGHSPW
Trigger: CCATGGAGAGTGACCCAATCACTCTGCATTTGAGGA...GTTTATCCCTGATGTTGTCTGTGAAGGTGTTCCATTCTCCAGAGATCTCACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR TCA 90 bp TCTGACTCGAGGAGGGCCCTCAGCGCAGAGAAAATTAAGTCTAGTGTTTGCAGGTCCTTGTTTCTCTGCTaGATACTTCAGAGCAAATCT +
Preference number: 2 (lower is better)
Translates to: SDSRRALSAEKIKSSVCRSLFLC*ILQSKS
Trigger: AGATTTGCTCTGAAGTATTCAGCAGAGAAACAAGGA...CCTGCAAACACTAGACTTAATTTTCTCTGCGCTGAGGGCCCTCCTCGAGTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR GCA 90 bp AAACAGTTTTTGGGAGGTAACACTGTCCCTATGGGAAGACTTGGTATTTTTCAGGGTCTCCACAGCAAATaGCCCTGTCCACCTTGTCTC +
Preference number: 2 (lower is better)
Translates to: KQFLGGNTVPMGRLGIFQGLHSK*PCPPCL
Trigger: GAGACAAGGTGGACAGGGGCATTTGCTGTGGAGACC...CTGAAAAATACCAAGTCTTCCCATAGGGACAGTGTTACCTCCCAAAAACTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR-3UTR GCA 90 bp ATATACAGCCATGTGAGCACCACTCAGATCAAGATACAGAACATTTTGCTCACCGCTCACTGCAACTTCTaGCTCCAGGGCTCAAGTGAT +
Preference number: 2 (lower is better)
Translates to: IYSHVSTTQIKIQNILLTAHCNF*LQGSSD
Trigger: ATCACTTGAGCCCTGGAGGCAGAAGTTGCAGTGAGC...GGTGAGCAAAATGTTCTGTATCTTGATCTGAGTGGTGCTCACATGGCTGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR CCA 90 bp TCTGACTCGAGGAGGGCCCTCAGCGCAGAGAAAATTAAGTCTAGTGTTTGCAGGCCCTATGGGAAGACTTaGTATTTTTCAGATTTCCCT +
Preference number: 2 (lower is better)
Translates to: SDSRRALSAEKIKSSVCRPYGKT*YFSDFP
Trigger: AGGGAAATCTGAAAAATACCAAGTCTTCCCATAGGG...CCTGCAAACACTAGACTTAATTTTCTCTGCGCTGAGGGCCCTCCTCGAGTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR CCA 90 bp CAGCTTCATCCTCTTCATCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGTTTCTGCATGCTATCTCTaGAATGGGTATCGATTAGAC +
Preference number: 2 (lower is better)
Translates to: QLHPLHLASSPEAEGMKVSACYL*NGYRLD
Trigger: GTCTAATCGATACCCATTCCAGAGATAGCATGCAGA...AACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGAAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR TCA 90 bp GTAACACTGTCCCTATGGGAAGACTTGGTATTTTTCAGATTTCCCTGCTGTTTATCTCTTCATGGTGGGTaGAGAGCACAGGGAGAGTGT +
Preference number: 2 (lower is better)
Translates to: VTLSLWEDLVFFRFPCCLSLHGG*RAQGEC
Trigger: ACACTCTCCCTGTGCTCTTCACCCACCATGAAGAGA...TAAACAGCAGGGAAATCTGAAAAATACCAAGTCTTCCCATAGGGACAGTGTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR-3UTR TCA 90 bp ATCTGCACATCACTTATACCATTTGGTGAGATCTCTGGAGAATGGAACACCTTCTTTTGGGTCTGTCTTTaGTGCTGGAGACGCTCCTCA +
Preference number: 2 (lower is better)
Translates to: ICTSLIPFGEISGEWNTFFWVCL*CWRRSS
Trigger: TGAGGAGCGTCTCCAGCATCAAAGACAGACCCAAAA...GAAGGTGTTCCATTCTCCAGAGATCTCACCAAATGGTATAAGTGATGTGCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR GCA 90 bp ACTGTCCCTATGGGAAGACTTGGTATTTTTCAGATTTCCCTGCTGTTTATCAAGACCGCTGAGCCACTCTaGAGTCCTCAAATGCAGAGT +
Preference number: 2 (lower is better)
Translates to: TVPMGRLGIFQISLLFIKTAEPL*SPQMQS
Trigger: ACTCTGCATTTGAGGACTGCAGAGTGGCTCAGCGGT...CTTGATAAACAGCAGGGAAATCTGAAAAATACCAAGTCTTCCCATAGGGACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR-3UTR GCA 90 bp ACCAAAGGAAAAGGTGATCAGAAGGCAACTATACCTGCTAGCACAGTGATGTCAACCAGAAACTGCATTTaGCAGCACCTTCTCATGGAC +
Preference number: 2 (lower is better)
Translates to: TKGKGDQKATIPASTVMSTRNCI*QHLLMD
Trigger: GTCCATGAGAAGGTGCTGGCAAATGCAGTTTCTGGT...TGACATCACTGTGCTAGCAGGTATAGTTGCCTTCTGATCACCTTTTCCTTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR GCA 90 bp TTGGTGAGATCTCTGGAGAATGGAACACCTTCACAGACAACATCAGGGATAAACCAGGTAACCAGAAGCTaGCTTGTGGAGGAACTAAAC +
Preference number: 2 (lower is better)
Translates to: LVRSLENGTPSQTTSGINQVTRS*LVEELN
Trigger: GTTTAGTTCCTCCACAAGGCAGCTTCTGGTTACCTG...GTTTATCCCTGATGTTGTCTGTGAAGGTGTTCCATTCTCCAGAGATCTCACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR CCA 90 bp TTTCAGTACCATGTCAGAGGTTTTCCTGGAAGCAGTCTCTGTTGGTGTGGTTTCTGCATCCTGAGAACTTaGGAAAATCCCTCTCCTTGT +
Preference number: 2 (lower is better)
Translates to: FQYHVRGFPGSSLCWCGFCILRT*ENPSPC
Trigger: ACAAGGAGAGGGATTTTCCCAAGTTCTCAGGATGCA...GAAACCACACCAACAGAGACTGCTTCCAGGAAAACCTCTGACATGGTACTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366976.3
3UTR CAA 90 bp AGGTGGATGGAACAAAGATTCCTGCCATTAAGGGACTTACAGTTTTaGGGTCTGTCTTTGATGCTGGAGACGCTCCTCAAATATTTGGTG +
Preference number: 2 (lower is better)
Translates to: RWMEQRFLPLRDLQF*GLSLMLETLLKYLV
Trigger: CACCAAATATTTGAGGAGCGTCTCCAGCATCAAAGACAGACCCAAAAACTGTAAGTCCCTTAATGGCAGGAATCTTTGTTCCATCCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR CCA 90 bp AAAATGAAAGGATCAGATGTCCCCCATAAACAACTACTCTACTCAGTAGGAAGACCTGTCTCTTCATGGTaGGTGAAGAGCACAGGGAGA +
Preference number: 2 (lower is better)
Translates to: KMKGSDVPHKQLLYSVGRPVSSW*VKSTGR
Trigger: TCTCCCTGTGCTCTTCACCCACCATGAAGAGACAGG...TCTTCCTACTGAGTAGAGTAGTTGTTTATGGGGGACATCTGATCCTTTCATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR-3UTR CCA 90 bp TTGGTGAGATCTCTGGAGAATGGAACACCTTCACAGACAACATCAGGGATAAACTGGTGTCAGAACAGGTaGTTAGCTCTCTGGAAGAAA +
Preference number: 2 (lower is better)
Translates to: LVRSLENGTPSQTTSGINWCQNR*LALWKK
Trigger: TTTCTTCCAGAGAGCTAACCACCTGTTCTGACACCA...GTTTATCCCTGATGTTGTCTGTGAAGGTGTTCCATTCTCCAGAGATCTCACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR TCA 90 bp TTGGTGAGATCTCTGGAGAATGGAACACCTTCACAGACAACATCAGGGATAAACATAATTAAGGTTAAATaGGGCCATAAGGGTGGGGCT +
Preference number: 2 (lower is better)
Translates to: LVRSLENGTPSQTTSGINIIKVK*GHKGGA
Trigger: AGCCCCACCCTTATGGCCTCATTTAACCTTAATTAT...GTTTATCCCTGATGTTGTCTGTGAAGGTGTTCCATTCTCCAGAGATCTCACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR TCA 90 bp ACCAAAGGAAAAGGTGATCAGAAGGCAACTATACCTGCTAGCACAGTGATGTCATCCCAGCCCTCCCACTaGATTTTTATTTCAACTTTC +
Preference number: 2 (lower is better)
Translates to: TKGKGDQKATIPASTVMSSQPSH*IFISTF
Trigger: GAAAGTTGAAATAAAAATTCAGTGGGAGGGCTGGGA...TGACATCACTGTGCTAGCAGGTATAGTTGCCTTCTGATCACCTTTTCCTTTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR TCA 90 bp CTTTCAAGACTTGCCTTGAGACTCAGAGCTGTTTCACAACCCTTTGTTCCAGGCTGTTGTTTAGTAATCTaGTGCCATTCCAATTCCTCT +
Preference number: 2 (lower is better)
Translates to: LSRLALRLRAVSQPFVPGCCLVI*CHSNSS
Trigger: AGAGGAATTGGAATGGCATCAGATTACTAAACAACA...GCCTGGAACAAAGGGTTGTGAAACAGCTCTGAGTCTCAAGGCAAGTCTTGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR GCA 90 bp TTCCAAACCCATGAGTTTCACTCTCAGGTTCCCTCTAGGAGCAGAAGTGCAGGTTTTTTCAGATTTCCCTaGTGTTTATCAAGATGGCAT +
Preference number: 2 (lower is better)
Translates to: FQTHEFHSQVPSRSRSAGFFRFP*CLSRWH
Trigger: ATGCCATCTTGATAAACAGCAGGGAAATCTGAAAAA...ACCTGCACTTCTGCTCCTAGAGGGAACCTGAGAGTGAAACTCATGGGTTTGGAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR GCA 90 bp ACCAAAGGAAAAGGTGATCAGAAGGCAACTATACCTGCTAGCACAGTGATGTCATGGCCTATGCAGAAATaGAACTTCTCCTCTTACACA +
Preference number: 2 (lower is better)
Translates to: TKGKGDQKATIPASTVMSWPMQK*NFSSYT
Trigger: TGTGTAAGAGGAGAAGTTGCATTTCTGCATAGGCCA...TGACATCACTGTGCTAGCAGGTATAGTTGCCTTCTGATCACCTTTTCCTTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR CCA 90 bp CAGCTTCATCCTCTTCATCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGTTGATAACGTCTGTGGCTaGTTTATTGAATTTGTTCTA +
Preference number: 2 (lower is better)
Translates to: QLHPLHLASSPEAEGMKVDNVCG*FIEFVL
Trigger: TAGAACAAATTCAATAAACCAGCCACAGACGTTATC...AACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGAAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR-3UTR CCA 90 bp GTAACACTGTCCCTATGGGAAGACTTGGTATTTTTCAGATTTCCCTGCTGTTTATGTCCACCTTGTCTCTaGGCACATCTGATGATAACG +
Preference number: 2 (lower is better)
Translates to: VTLSLWEDLVFFRFPCCLCPPCL*AHLMIT
Trigger: CGTTATCATCAGATGTGCCCAGAGACAAGGTGGACA...TAAACAGCAGGGAAATCTGAAAAATACCAAGTCTTCCCATAGGGACAGTGTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR-3UTR CCA 90 bp ATCTGCACATCACTTATACCATTTGGTGAGATCTCTGGAGAATGGAACACCTTCACATATGGATTGTACTaGTTGGCACAGAAGCCTCCT +
Preference number: 2 (lower is better)
Translates to: ICTSLIPFGEISGEWNTFTYGLY*LAQKPP
Trigger: AGGAGGCTTCTGTGCCAACCAGTACAATCCATATGT...GAAGGTGTTCCATTCTCCAGAGATCTCACCAAATGGTATAAGTGATGTGCAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR CCA 90 bp GAAATGGGCGTGGTAATAGCCCTTAATTCATGGATTGTCTTGAGGATTAAAAGATCCTATCCGCTCTTCTaGTGGAGATGCTCGGCTATA +
Preference number: 2 (lower is better)
Translates to: EMGVVIALNSWIVLRIKRSYPLF*WRCSAI
Trigger: TATAGCCGAGCATCTCCACCAGAAGAGCGGATAGGA...TCTTTTAATCCTCAAGACAATCCATGAATTAAGGGCTATTACCACGCCCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR CCA 90 bp ACCATGTCAGAGGTTTTCCTGGAAGCAGTCTCTGTTGGTGTGGTTTCTATCTGTGTTTCCTATGACAACTaGAAAAGACTTCTTGGTGAA +
Preference number: 2 (lower is better)
Translates to: TMSEVFLEAVSVGVVSICVSYDN*KRLLGE
Trigger: TTCACCAAGAAGTCTTTTCCAGTTGTCATAGGAAAC...ACAGATAGAAACCACACCAACAGAGACTGCTTCCAGGAAAACCTCTGACATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366976.3
3UTR-3UTR CCA 90 bp GAAATGGGCGTGGTAATAGCCCTTAATTCATGGATTGTCTTGAGGATTAAAAGAAAGCCACCCAGCCTGTaGTATTCTGTTATAGTAGCC +
Preference number: 2 (lower is better)
Translates to: EMGVVIALNSWIVLRIKRKPPSL*YSVIVA
Trigger: GGCTACTATAACAGAATACCACAGGCTGGGTGGCTT...TCTTTTAATCCTCAAGACAATCCATGAATTAAGGGCTATTACCACGCCCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CAA 90 bp ATATACAGCCATGTGAGCACCACTCAGATCAAGATACAGAACATTTaGCTCACCCAAAAATGTTTCCCGTGCCATTCCCAGTTAATATCT +
Preference number: 2 (lower is better)
Translates to: IYSHVSTTQIKIQNI*LTQKCFPCHSQLIS
Trigger: AGATATTAACTGGGAATGGCACGGGAAACATTTTTGGGTGAGCAAAATGTTCTGTATCTTGATCTGAGTGGTGCTCACATGGCTGTATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CAA 90 bp CAAAGATTCCTGCCATTAAGGGACTTACAGTTTTTGGGTCTGTCTTaGATGCTGGAGACGCTCCTCAAATATTTGGTGAATCAGTTTTGT +
Preference number: 2 (lower is better)
Translates to: QRFLPLRDLQFLGLS*MLETLLKYLVNQFC
Trigger: ACAAAACTGATTCACCAAATATTTGAGGAGCGTCTCCAGCATCAAAGACAGACCCAAAAACTGTAAGTCCCTTAATGGCAGGAATCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR TCA 90 bp GGTGTGGTTTCTATCTGTGTTATAAAGTTCTCAGGTTTAGCATCTGGTTTCCTAGAAAAGACTTCTTGGTaGATCCTCTGGAGGTGGATA +
Preference number: 2 (lower is better)
Translates to: GVVSICVIKFSGLASGFLEKTSW*ILWRWI
Trigger: TATCCACCTCCAGAGGATTCACCAAGAAGTCTTTTC...TAGGAAACCAGATGCTAAACCTGAGAACTTTATAACACAGATAGAAACCACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366976.3
3UTR-3UTR TCA 90 bp AGGCTAGTCAAGGTGATGATAGAAATGCCCAATCTTTTACACAGGCACAGGAGTAAGGCCTTCACATTATaGACTCATTTACTTCTCAGA +
Preference number: 2 (lower is better)
Translates to: RLVKVMIEMPNLLHRHRSKAFTL*THLLLR
Trigger: TCTGAGAAGTAAATGAGTTCATAATGTGAAGGCCTT...ACTCCTGTGCCTGTGTAAAAGATTGGGCATTTCTATCATCACCTTGACTAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR GCA 90 bp ATATACAGCCATGTGAGCACCACTCAGATCAAGATACAGAACATTTTGCTCACCGGCATTATCATTGTTTaGACACTCATCCTCTTCACT +
Preference number: 2 (lower is better)
Translates to: IYSHVSTTQIKIQNILLTGIIIV*TLILFT
Trigger: AGTGAAGAGGATGAGTGTGCAAACAATGATAATGCC...GGTGAGCAAAATGTTCTGTATCTTGATCTGAGTGGTGCTCACATGGCTGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CAA 90 bp TCTCATGAAATGGGCGTGGTAATAGCCCTTAATTCATGGATTGTCTaGAGGATTAAAAGAGATGGTGCATGTGAAGCTTTTAGCATGATC +
Preference number: 2 (lower is better)
Translates to: SHEMGVVIALNSWIV*RIKRDGACEAFSMI
Trigger: GATCATGCTAAAAGCTTCACATGCACCATCTCTTTTAATCCTCAAGACAATCCATGAATTAAGGGCTATTACCACGCCCATTTCATGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR TCA 90 bp GAAATGGGCGTGGTAATAGCCCTTAATTCATGGATTGTCTTGAGGATTAAAAGACTGTGGCTGGTTTATTaGATTTGTTCTAGGCTTGTG +
Preference number: 2 (lower is better)
Translates to: EMGVVIALNSWIVLRIKRLWLVY*ICSRLV
Trigger: CACAAGCCTAGAACAAATTCAATAAACCAGCCACAG...TCTTTTAATCCTCAAGACAATCCATGAATTAAGGGCTATTACCACGCCCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CAA 90 bp CTTAGTTTTGCCCATTCTGTGATTCCATACACAGGATGTATTCTCTaGTGCCTGGCTTTGCTTCTTTTATTCAATATAGTATCTTTGATA +
Preference number: 2 (lower is better)
Translates to: LSFAHSVIPYTGCIL*CLALLLLFNIVSLI
Trigger: TATCAAAGATACTATATTGAATAAAAGAAGCAAAGCCAGGCACAAGAGAATACATCCTGTGTATGGAATCACAGAATGGGCAAAACTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CAA 90 bp TTTCTCTTCTTTCTGGGAGTACAGTCATCATTCTGGGATTTTGCTTaGTATGTATCTGTTTTCTTTGAGGTCCTTTATTCTCTTTGGTTT +
Preference number: 2 (lower is better)
Translates to: FLFFLGVQSSFWDFA*YVSVFFEVLYSLWF
Trigger: AAACCAAAGAGAATAAAGGACCTCAAAGAAAACAGATACATACAAAGCAAAATCCCAGAATGATGACTGTACTCCCAGAAAGAAGAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR GCA 72 bp CCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACTaGCGAGAGAGGGAGGGCGGGCTCTGGGTCACCCAG +
Preference number: 3 (lower is better)
Translates to: PSSPVYSGLGDD*REREGGLWVTQ
Trigger: CTGGGTGACCCAGAGCCCGCCCTCCCTCTCTCGGCAGTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR GCA 72 bp GTGCTGCAAAGGGCAGTGATGTGTGGACGAAGGGGTTaGTGGGGTGACCCAGGCAGCAAGGACCCTGAGGGG +
Preference number: 3 (lower is better)
Translates to: VLQRAVMCGRRG*WGDPGSKDPEG
Trigger: CCCCTCAGGGTCCTTGCTGCCTGGGTCACCCCAGCAACCCCTTCGTCCACACATCACTGCCCTTTGCAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CCA 72 bp CTGTGCAACAACAGAGCCGAGCCCGGTCCCAGGGGCTaGATGGTGTCCCTCCCTCTGATGGACACCAGCACA +
Preference number: 3 (lower is better)
Translates to: LCNNRAEPGPRG*MVSLPLMDTST
Trigger: TGTGCTGGTGTCCATCAGAGGGAGGGACACCATCCAGCCCCTGGGACCGGGCTCGGCTCTGTTGTTGCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR CCA 72 bp TCCATGGTGTCCATGAGAGGCTGCCAGCCACCTCGGTaGGGTCCTCCCACAATCCTCCATGTGGCACGTGGG +
Preference number: 3 (lower is better)
Translates to: SMVSMRGCQPPR*GPPTILHVARG
Trigger: CCCACGTGCCACATGGAGGATTGTGGGAGGACCCCACCGAGGTGGCTGGCAGCCTCTCATGGACACCATGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR GCA 72 bp GCACAGAAGCCTCCTCACTATCCCTGCCACTCTGGCTaGTCCAGCTCCATGTCCTGGGACACCCTACCCTGC +
Preference number: 3 (lower is better)
Translates to: AQKPPHYPCHSG*SSSMSWDTLPC
Trigger: GCAGGGTAGGGTGTCCCAGGACATGGAGCTGGAGCAGCCAGAGTGGCAGGGATAGTGAGGAGGCTTCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR CAA 90 bp GAGGCTGCCAGCCACCTCGGTGGGGTCCTCCCACAATCCTCCATGTGGCACGTGTTCATCCTCTTCATCTaGCCAGTTCACCAGAGGCAG +
Preference number: 3 (lower is better)
Translates to: EAASHLGGVLPQSSMWHVFILFI*PVHQRQ
Trigger: CTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGAA...CACGTGCCACATGGAGGATTGTGGGAGGACCCCACCGAGGTGGCTGGCAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR TCA 72 bp CCAACGAGGTCGCTGTGGTGTAGCGGTGAGAGCGTCTaGGACTCTGGACAAGGCCTTTGCTGTGAACCACGG +
Preference number: 3 (lower is better)
Translates to: PTRSLWCSGESV*DSGQGLCCEPR
Trigger: CCGTGGTTCACAGCAAAGGCCTTGTCCAGAGTCTCAGACGCTCTCACCGCTACACCACAGCGACCTCGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR CAA 90 bp CCCTCTGATGGACACCAGCACAGCACGGACTTTCCCGTCCTGTCTCTTCATGGTCAGTCTACTCCGGCCTaGGAGATGACTGCCGAGAGA +
Preference number: 3 (lower is better)
Translates to: PSDGHQHSTDFPVLSLHGQSTPA*EMTAER
Trigger: TCTCTCGGCAGTCATCTCCAAGGCCGGAGTAGACTG...ACCATGAAGAGACAGGACGGGAAAGTCCGTGCTGTGCTGGTGTCCATCAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR CCA 72 bp GCACAGCACGGACTTTCCCGTCCTGTCTCTTCATGGTaGGTGAAGAGCACAGGGAGAGTGTGCTTCCTGGCT +
Preference number: 3 (lower is better)
Translates to: AQHGLSRPVSSW*VKSTGRVCFLA
Trigger: AGCCAGGAAGCACACTCTCCCTGTGCTCTTCACCCACCATGAAGAGACAGGACGGGAAAGTCCGTGCTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR CCA 72 bp CCAGCACAGCACGGACTTTCCCGTCCTGTCTCTTCATaGTGGGTGAAGAGCACAGGGAGAGTGTGCTTCCTG +
Preference number: 3 (lower is better)
Translates to: PAQHGLSRPVSS*WVKSTGRVCFL
Trigger: CAGGAAGCACACTCTCCCTGTGCTCTTCACCCACCATGAAGAGACAGGACGGGAAAGTCCGTGCTGTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR GCA 72 bp GGTGGAAGCAGAGTTTGTGGTCAGAAGGCCTCGCTCTaGTCTACATGGTCTATAGACCGCTGGGAAGGTGGC +
Preference number: 3 (lower is better)
Translates to: GGSRVCGQKASL*STWSIDRWEGG
Trigger: GCCACCTTCCCAGCGGTCTATAGACCATGTAGAGCAGAGCGAGGCCTTCTGACCACAAACTCTGCTTCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CCA 72 bp AAGGCCTCGCTCTGCTCTACATGGTCTATAGACCGCTaGGAAGGTGGCCAGGCACTTCCCTTCTCATCTCCA +
Preference number: 3 (lower is better)
Translates to: KASLCSTWSIDR*EGGQALPFSSP
Trigger: TGGAGATGAGAAGGGAAGTGCCTGGCCACCTTCCCAGCGGTCTATAGACCATGTAGAGCAGAGCGAGGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR TCA 72 bp AGGCAGAGGTGGGCGGATCGCTTGAGCTCACGAGTTTaGGACCAGCCACATAGCGAAACTCCGTCTCTACAA +
Preference number: 3 (lower is better)
Translates to: RQRWADRLSSRV*DQPHSETPSLQ
Trigger: TTGTAGAGACGGAGTTTCGCTATGTGGCTGGTCTCAAACTCGTGAGCTCAAGCGATCCGCCCACCTCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CCA 72 bp GCTGAGCCACTCTGCAGTCCTCAAATGCAGAGTGATTaGGTCACTCTCCATGGTGTCCATGAGAGGCTGCCA +
Preference number: 3 (lower is better)
Translates to: AEPLCSPQMQSD*VTLHGVHERLP
Trigger: TGGCAGCCTCTCATGGACACCATGGAGAGTGACCCAATCACTCTGCATTTGAGGACTGCAGAGTGGCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR CCA 72 bp GCTCTGCTCTACATGGTCTATAGACCGCTGGGAAGGTaGCCAGGCACTTCCCTTCTCATCTCCACCTCTTTC +
Preference number: 3 (lower is better)
Translates to: ALLYMVYRPLGR*PGTSLLISTSF
Trigger: GAAAGAGGTGGAGATGAGAAGGGAAGTGCCTGGCCACCTTCCCAGCGGTCTATAGACCATGTAGAGCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CCA 72 bp AGAGTTTGTGGTCAGAAGGCCTCGCTCTGCTCTACATaGTCTATAGACCGCTGGGAAGGTGGCCAGGCACTT +
Preference number: 3 (lower is better)
Translates to: RVCGQKASLCST*SIDRWEGGQAL
Trigger: AAGTGCCTGGCCACCTTCCCAGCGGTCTATAGACCATGTAGAGCAGAGCGAGGCCTTCTGACCACAAACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR CAA 90 bp GGAGGTGGTCATCTACAAGTCGGGAAGACAGCCCTCACCAGAAACTGCATTTGCGAATTTGTTCTAGGCTaGTGTCCCCCACCGACCACC +
Preference number: 3 (lower is better)
Translates to: GGGHLQVGKTALTRNCICEFVLG*CPPPTT
Trigger: GGTGGTCGGTGGGGGACACAAGCCTAGAACAAATTC...GCAAATGCAGTTTCTGGTGAGGGCTGTCTTCCCGACTTGTAGATGACCACCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR GCA 72 bp ATGTCCAGACCGCTGAGCCACTCTGCAGTCCTCAAATaGAGAGTGATTGGGTCACTCTCCATGGTGTCCATG +
Preference number: 3 (lower is better)
Translates to: MSRPLSHSAVLK*RVIGSLSMVSM
Trigger: CATGGACACCATGGAGAGTGACCCAATCACTCTGCATTTGAGGACTGCAGAGTGGCTCAGCGGTCTGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR GCA 72 bp TGGCTCCTCTTCAATGTCCAGACCGCTGAGCCACTCTaGAGTCCTCAAATGCAGAGTGATTGGGTCACTCTC +
Preference number: 3 (lower is better)
Translates to: WLLFNVQTAEPL*SPQMQSDWVTL
Trigger: GAGAGTGACCCAATCACTCTGCATTTGAGGACTGCAGAGTGGCTCAGCGGTCTGGACATTGAAGAGGAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR-3UTR CAA 90 bp AGGGCCTCCACACCCCACCTTACTGCTTTAACCAATGTCCATCTAACTGTTCAGGAGACACCAGAGAGCTaGCACTCTGTCCCTCTCTCC +
Preference number: 3 (lower is better)
Translates to: RASTPHLTALTNVHLTVQETPES*HSVPLS
Trigger: GGAGAGAGGGACAGAGTGCAAGCTCTCTGGTGTCTC...CTGAACAGTTAGATGGACATTGGTTAAAGCAGTAAGGTGGGGTGTGGAGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR CAA 90 bp TCTGACTCGAGGAGGGCCCTCAGCGCAGAGAAAATTAAGTCTAGTGTTTGCAGGAGGCATGAGAACCTCTaGAACCTGGGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: SDSRRALSAEKIKSSVCRRHENL*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCAAGAGGTTCTCATGCCT...CCTGCAAACACTAGACTTAATTTTCTCTGCGCTGAGGGCCCTCCTCGAGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR CAA 90 bp CAGCTTCATCCTCTTCATCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGTTTGTAATCACAGCACTTaGGGAGGCCAGGGCGAGTGG +
Preference number: 3 (lower is better)
Translates to: QLHPLHLASSPEAEGMKVCNHST*GGQGEW
Trigger: CCACTCGCCCTGGCCTCCCAAAGTGCTGTGATTACA...AACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR TCA 72 bp AATGGATCCCTAGATGCTACTGATGGCTCCCCTAACTaGCGGCAAATTGCTTGTGGGCAGGGTCTGTGCCTT +
Preference number: 3 (lower is better)
Translates to: NGSLDATDGSPN*RQIACGQGLCL
Trigger: AAGGCACAGACCCTGCCCACAAGCAATTTGCCGTCAGTTAGGGGAGCCATCAGTAGCATCTAGGGATCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR CAA 90 bp TCTGACTCGAGGAGGGCCCTCAGCGCAGAGAAAATTAAGTCTAGTGTTTGCAGGCACCAGAAACTGCATTaGCCAGCACCTTCTCATGGA +
Preference number: 3 (lower is better)
Translates to: SDSRRALSAEKIKSSVCRHQKLH*PAPSHG
Trigger: TCCATGAGAAGGTGCTGGCAAATGCAGTTTCTGGTG...CCTGCAAACACTAGACTTAATTTTCTCTGCGCTGAGGGCCCTCCTCGAGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR CAA 90 bp TCTGACTCGAGGAGGGCCCTCAGCGCAGAGAAAATTAAGTCTAGTGTTTGCAGGCCATTCCAATTCCTCTaGGTATTCCTCAGGTCTGGG +
Preference number: 3 (lower is better)
Translates to: SDSRRALSAEKIKSSVCRPFQFL*VFLRSG
Trigger: CCCAGACCTGAGGAATACCAAGAGGAATTGGAATGG...CCTGCAAACACTAGACTTAATTTTCTCTGCGCTGAGGGCCCTCCTCGAGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR GCA 72 bp ATCAAGATGGCATATGGGTGTAGGGAGAAGAAGAGGTaGTGGAGCCATCTATCCAGGTCCCTGTACTCTCTC +
Preference number: 3 (lower is better)
Translates to: IKMAYGCREKKR*WSHLSRSLYSL
Trigger: GAGAGAGTACAGGGACCTGGATAGATGGCTCCAGCACCTCTTCTTCTCCCTACACCCATATGCCATCTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR GCA 72 bp CTTCCAGTTGTGGTGGGTGAAGATTTCACTCCCCACTaGCATGTCAAAGCTGGTGTTCAGACAGTCACACTG +
Preference number: 3 (lower is better)
Translates to: LPVVVGEDFTPH*HVKAGVQTVTL
Trigger: CAGTGTGACTGTCTGAACACCAGCTTTGACATGGCAGTGGGGAGTGAAATCTTCACCCACCACAACTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR CAA 90 bp GTGAATCCTCTGGAGGTGGATAACAGGCTGCATCCTGAGAACTTGGGAAAATCCCTGCATCCTGAGAACTaGGGAAAATCCCTCTCCTTG +
Preference number: 3 (lower is better)
Translates to: VNPLEVDNRLHPENLGKSLHPEN*GKSLSL
Trigger: CAAGGAGAGGGATTTTCCCAAGTTCTCAGGATGCAG...GGATTTTCCCAAGTTCTCAGGATGCAGCCTGTTATCCACCTCCAGAGGATTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366976.3
ENST00000626725.1
3UTR-3UTR CAA 90 bp TTGGTGAGATCTCTGGAGAATGGAACACCTTCACAGACAACATCAGGGATAAACCTGACGGCAAATTGCTaGTGGGCAGGGTCTGTGCCT +
Preference number: 3 (lower is better)
Translates to: LVRSLENGTPSQTTSGINLTANC*WAGSVP
Trigger: AGGCACAGACCCTGCCCACAAGCAATTTGCCGTCAG...GTTTATCCCTGATGTTGTCTGTGAAGGTGTTCCATTCTCCAGAGATCTCACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CCA 72 bp AGGTATTTATGGACTGGTGAAGAGTTGTGTGGAGGGTaGCATTCCCATCAAGGTGGCATCAGGGGCAGAAAT +
Preference number: 3 (lower is better)
Translates to: RYLWTGEELCGG*HSHQGGIRGRN
Trigger: ATTTCTGCCCCTGATGCCACCTTGATGGGAATGCCACCCTCCACACAACTCTTCACCAGTCCATAAATACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR TCA 72 bp AAACTGAAGTCTAGTATGTTCAGAAACGCAGGGTGCTaGCCCACCATCCAACTGAAGCTGAGCTCAGGAATG +
Preference number: 3 (lower is better)
Translates to: KLKSSMFRNAGC*PTIQLKLSSGM
Trigger: CATTCCTGAGCTCAGCTTCAGTTGGATGGTGGGTCAGCACCCTGCGTTTCTGAACATACTAGACTTCAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR TCA 72 bp ACTAGGTATGAGCCCAAAGGCACTGGAGCCATTCTCTaGGTAAGGCTAGTCAAGGTGATGATAGAAATGCCC +
Preference number: 3 (lower is better)
Translates to: TRYEPKGTGAIL*VRLVKVMIEMP
Trigger: GGGCATTTCTATCATCACCTTGACTAGCCTTACTCAGAGAATGGCTCCAGTGCCTTTGGGCTCATACCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR TCA 72 bp AAGAAATGCGCCAAGTCTCAGGTATTTATGGACTGGTaGAGAGTTGTGTGGAGGGTGGCATTCCCATCAAGG +
Preference number: 3 (lower is better)
Translates to: KKCAKSQVFMDW*RVVWRVAFPSR
Trigger: CCTTGATGGGAATGCCACCCTCCACACAACTCTTCACCAGTCCATAAATACCTGAGACTTGGCGCATTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR GCA 72 bp AACATCAGGGATAAACCTGATCACCGTCCCCTTTGTTaGCACATCTCGCAGCTTCTCCCTTCTGTTTTTCCT +
Preference number: 3 (lower is better)
Translates to: NIRDKPDHRPLC*HISQLLPSVFP
Trigger: AGGAAAAACAGAAGGGAGAAGCTGCGAGATGTGGCAACAAAGGGGACGGTGATCAGGTTTATCCCTGATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CCA 72 bp CAGACAGTCACACTGTTACAAACATATGGATTGTACTaGTTGGCACAGAAGCCTCCTCACTATCCCTGCCAC +
Preference number: 3 (lower is better)
Translates to: QTVTLLQTYGLY*LAQKPPHYPCH
Trigger: GTGGCAGGGATAGTGAGGAGGCTTCTGTGCCAACCAGTACAATCCATATGTTTGTAACAGTGTGACTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CCA 72 bp CTCTGGAGGTGGATAACAGGCTGCATCCTGAGAACTTaGGAAAATCCCTCTCCTTGTTCAATTAATGCAGGC +
Preference number: 3 (lower is better)
Translates to: LWRWITGCILRT*ENPSPCSINAG
Trigger: GCCTGCATTAATTGAACAAGGAGAGGGATTTTCCCAAGTTCTCAGGATGCAGCCTGTTATCCACCTCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626725.1
3UTR-3UTR CAA 90 bp ACTGTCCCTATGGGAAGACTTGGTATTTTTCAGATTTCCCTGCTGTTTATCAAGCAGTCTACTCCGGCCTaGGAGATGACTGCCGAGAGA +
Preference number: 3 (lower is better)
Translates to: TVPMGRLGIFQISLLFIKQSTPA*EMTAER
Trigger: TCTCTCGGCAGTCATCTCCAAGGCCGGAGTAGACTG...CTTGATAAACAGCAGGGAAATCTGAAAAATACCAAGTCTTCCCATAGGGACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR-3UTR CAA 90 bp ATATACAGCCATGTGAGCACCACTCAGATCAAGATACAGAACATTTTGCTCACCGTGTTACCCCTGAGGTaGGCTCCTCTTCAATGTCCA +
Preference number: 3 (lower is better)
Translates to: IYSHVSTTQIKIQNILLTVLPLR*APLQCP
Trigger: TGGACATTGAAGAGGAGCCAACCTCAGGGGTAACAC...GGTGAGCAAAATGTTCTGTATCTTGATCTGAGTGGTGCTCACATGGCTGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR CAA 90 bp GTAACACTGTCCCTATGGGAAGACTTGGTATTTTTCAGATTTCCCTGCTGTTTAGAATTTGTTCTAGGCTaGTGTCCCCCACCGACCACC +
Preference number: 3 (lower is better)
Translates to: VTLSLWEDLVFFRFPCCLEFVLG*CPPPTT
Trigger: GGTGGTCGGTGGGGGACACAAGCCTAGAACAAATTC...TAAACAGCAGGGAAATCTGAAAAATACCAAGTCTTCCCATAGGGACAGTGTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR-3UTR CAA 90 bp TGGTTTCCTATGACAACTGGAAAAGACTTCTTGGTGAATCCTCTGGAGGTGGATCTGCATCCTGAGAACTaGGGAAAATCCCTCTCCTTG +
Preference number: 3 (lower is better)
Translates to: WFPMTTGKDFLVNPLEVDLHPEN*GKSLSL
Trigger: CAAGGAGAGGGATTTTCCCAAGTTCTCAGGATGCAG...ATCCACCTCCAGAGGATTCACCAAGAAGTCTTTTCCAGTTGTCATAGGAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366976.3
ENST00000626725.1
3UTR-3UTR CAA 90 bp ATCTGCACATCACTTATACCATTTGGTGAGATCTCTGGAGAATGGAACACCTTCCGAGTGTGCTGTGTTTaGGGAGCCTTAGTTTCCCAG +
Preference number: 3 (lower is better)
Translates to: ICTSLIPFGEISGEWNTFRVCCV*GALVSQ
Trigger: CTGGGAAACTAAGGCTCCCAAAACACAGCACACTCG...GAAGGTGTTCCATTCTCCAGAGATCTCACCAAATGGTATAAGTGATGTGCAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR TCA 72 bp GACATCATTGTAGAAGATGTGGGCCACAGAGCTACATaGATGGGCACCAAGGGAGGTCTTAAAATCTGCAAC +
Preference number: 3 (lower is better)
Translates to: DIIVEDVGHRAT*MGTKGGLKICN
Trigger: GTTGCAGATTTTAAGACCTCCCTTGGTGCCCATTCATGTAGCTCTGTGGCCCACATCTTCTACAATGATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR TCA 72 bp TGGCATCAGGGGCAGAAATGGACAAAAGAACTCCAATaGCATCATTGTAGAAGATGTGGGCCACAGAGCTAC +
Preference number: 3 (lower is better)
Translates to: WHQGQKWTKELQ*HHCRRCGPQSY
Trigger: GTAGCTCTGTGGCCCACATCTTCTACAATGATGTCATTGGAGTTCTTTTGTCCATTTCTGCCCCTGATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CCA 72 bp ATCGAGGGCCCATCATGTGCCAGCAATTATTCCAGGTaGATGGAACAAAGATTCCTGCCATTAAGGGACTTA +
Preference number: 3 (lower is better)
Translates to: IEGPSCASNYSR*MEQRFLPLRDL
Trigger: TAAGTCCCTTAATGGCAGGAATCTTTGTTCCATCCACCTGGAATAATTGCTGGCACATGATGGGCCCTCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR CAA 90 bp TCTGATGATAACGTCTGTGGCTGGTTTATTGAATTTGTTCTAGGCTTGTGTCCCTTCATCCTCTTCATCTaGCCAGTTCACCAGAGGCAG +
Preference number: 3 (lower is better)
Translates to: SDDNVCGWFIEFVLGLCPFILFI*PVHQRQ
Trigger: CTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGAA...GGGACACAAGCCTAGAACAAATTCAATAAACCAGCCACAGACGTTATCATCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR-3UTR CAA 90 bp GAAATGGGCGTGGTAATAGCCCTTAATTCATGGATTGTCTTGAGGATTAAAAGAATGCCCCTGTCCACCTaGTCTCTGGGCACATCTGAT +
Preference number: 3 (lower is better)
Translates to: EMGVVIALNSWIVLRIKRMPLST*SLGTSD
Trigger: ATCAGATGTGCCCAGAGACAAGGTGGACAGGGGCAT...TCTTTTAATCCTCAAGACAATCCATGAATTAAGGGCTATTACCACGCCCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR CAA 90 bp CAGCTTCATCCTCTTCATCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGTTACGCTCCTCAAATATTaGGTGAATCAGTTTTGTGCA +
Preference number: 3 (lower is better)
Translates to: QLHPLHLASSPEAEGMKVTLLKY*VNQFCA
Trigger: TGCACAAAACTGATTCACCAAATATTTGAGGAGCGT...AACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CCA 72 bp AGCTGGTGTTCAGACAGTCACACTGTTACAAACATATaGATTGTACTGGTTGGCACAGAAGCCTCCTCACTA +
Preference number: 3 (lower is better)
Translates to: SWCSDSHTVTNI*IVLVGTEASSL
Trigger: TAGTGAGGAGGCTTCTGTGCCAACCAGTACAATCCATATGTTTGTAACAGTGTGACTGTCTGAACACCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CCA 72 bp GTTCTAGTAGACGTAGTTCTAGTAGACAGGAGACTCTaGAGTCCTAATTCAGGTCAGTTTCCCAGTGATCTG +
Preference number: 3 (lower is better)
Translates to: VLVDVVLVDRRL*SPNSGQFPSDL
Trigger: CAGATCACTGGGAAACTGACCTGAATTAGGACTCCAGAGTCTCCTGTCTACTAGAACTACGTCTACTAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR CAA 90 bp CTTTCAAGACTTGCCTTGAGACTCAGAGCTGTTTCACAACCCTTTGTTCCAGGCCATCACTTATACCATTaGGTGAGATCTCTGGAGAAT +
Preference number: 3 (lower is better)
Translates to: LSRLALRLRAVSQPFVPGHHLYH*VRSLEN
Trigger: ATTCTCCAGAGATCTCACCAAATGGTATAAGTGATG...GCCTGGAACAAAGGGTTGTGAAACAGCTCTGAGTCTCAAGGCAAGTCTTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CCA 72 bp TGGCATTATCATTGTTTGCACACTCATCCTCTTCACTaGAATATGACCTTCCTGAAGGCAACACTTGTCCTG +
Preference number: 3 (lower is better)
Translates to: WHYHCLHTHPLH*NMTFLKATLVL
Trigger: CAGGACAAGTGTTGCCTTCAGGAAGGTCATATTCCAGTGAAGAGGATGAGTGTGCAAACAATGATAATGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR CAA 90 bp AGGCTAGTCAAGGTGATGATAGAAATGCCCAATCTTTTACACAGGCACAGGAGTCTATGGAGTAAAACTTaGGGCTCTCAAGAGGATTTC +
Preference number: 3 (lower is better)
Translates to: RLVKVMIEMPNLLHRHRSLWSKT*GSQEDF
Trigger: GAAATCCTCTTGAGAGCCCAAAGTTTTACTCCATAG...ACTCCTGTGCCTGTGTAAAAGATTGGGCATTTCTATCATCACCTTGACTAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR TCA 72 bp GGATCAGAGGCAGGCACACAGGGCATAGACAGAATATaGCAAGTCAGAGAGAATTCGAACACTTATTTTAAC +
Preference number: 3 (lower is better)
Translates to: GSEAGTQGIDRI*QVRENSNTYFN
Trigger: GTTAAAATAAGTGTTCGAATTCTCTCTGACTTGTCATATTCTGTCTATGCCCTGTGTGCCTGCCTCTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR GCA 72 bp TCCCTATGGGAAGACTTGGTATTTTTCAGATTTCCCTaGTGTTTATCAAGATGGCATATGGGTGTAGGGAGA +
Preference number: 3 (lower is better)
Translates to: SLWEDLVFFRFP*CLSRWHMGVGR
Trigger: TCTCCCTACACCCATATGCCATCTTGATAAACAGCAGGGAAATCTGAAAAATACCAAGTCTTCCCATAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR CCA 72 bp TTGGTATTTTTCAGATTTCCCTGCTGTTTATCAAGATaGCATATGGGTGTAGGGAGAAGAAGAGGTGCTGGA +
Preference number: 3 (lower is better)
Translates to: LVFFRFPCCLSR*HMGVGRRRGAG
Trigger: TCCAGCACCTCTTCTTCTCCCTACACCCATATGCCATCTTGATAAACAGCAGGGAAATCTGAAAAATACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR CCA 72 bp TACCATGTCAGAGGTTTTCCTGGAAGCAGTCTCTGTTaGTGTGGTTTCTATCTGTGTTATAAAGTTCTCAGG +
Preference number: 3 (lower is better)
Translates to: YHVRGFPGSSLC*CGFYLCYKVLR
Trigger: CCTGAGAACTTTATAACACAGATAGAAACCACACCAACAGAGACTGCTTCCAGGAAAACCTCTGACATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366976.3
3UTR-3UTR CAA 90 bp GGTGTGGTTTCTATCTGTGTTATAAAGTTCTCAGGTTTAGCATCTGGTTTCCTAACTGGAAAAGACTTCTaGGTGAATCCTCTGGAGGTG +
Preference number: 3 (lower is better)
Translates to: GVVSICVIKFSGLASGFLTGKDF*VNPLEV
Trigger: CACCTCCAGAGGATTCACCAAGAAGTCTTTTCCAGT...TAGGAAACCAGATGCTAAACCTGAGAACTTTATAACACAGATAGAAACCACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366976.3
3UTR-3UTR CAA 90 bp ACCAAAGGAAAAGGTGATCAGAAGGCAACTATACCTGCTAGCACAGTGATGTCATTACAAACATATGGATaGTACTGGTTGGCACAGAAG +
Preference number: 3 (lower is better)
Translates to: TKGKGDQKATIPASTVMSLQTYG*YWLAQK
Trigger: CTTCTGTGCCAACCAGTACAATCCATATGTTTGTAA...TGACATCACTGTGCTAGCAGGTATAGTTGCCTTCTGATCACCTTTTCCTTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR GCA 72 bp TGCAATCTGAACCCAGATGATCTGGCTCAGAGACTATaGTCTTTAAGATCTCTGACTTTTGATCATAGACAG +
Preference number: 3 (lower is better)
Translates to: CNLNPDDLAQRL*SLRSLTFDHRQ
Trigger: CTGTCTATGATCAAAAGTCAGAGATCTTAAAGAGCATAGTCTCTGAGCCAGATCATCTGGGTTCAGATTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR GCA 72 bp TCCCCTAAGTTCCACACATACATCTATCATACCATTTaGTGCATGGCATTATCATTGTTTGCACACTCATCC +
Preference number: 3 (lower is better)
Translates to: SPKFHTYIYHTI*CMALSLFAHSS
Trigger: GGATGAGTGTGCAAACAATGATAATGCCATGCAGCAAATGGTATGATAGATGTATGTGTGGAACTTAGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR-3UTR CAA 90 bp GAAATGGGCGTGGTAATAGCCCTTAATTCATGGATTGTCTTGAGGATTAAAAGAAGGGACTTACAGTTTTaGGGTCTGTCTTTGATGCTG +
Preference number: 3 (lower is better)
Translates to: EMGVVIALNSWIVLRIKRRDLQF*GLSLML
Trigger: CAGCATCAAAGACAGACCCAAAAACTGTAAGTCCCT...TCTTTTAATCCTCAAGACAATCCATGAATTAAGGGCTATTACCACGCCCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR TCA 72 bp GAACTAATAATGGTAGAACTGCAATCTGAACCCAGATaGTCTGGCTCAGAGACTATGCTCTTTAAGATCTCT +
Preference number: 3 (lower is better)
Translates to: ELIMVELQSEPR*SGSETMLFKIS
Trigger: AGAGATCTTAAAGAGCATAGTCTCTGAGCCAGATCATCTGGGTTCAGATTGCAGTTCTACCATTATTAGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR TCA 72 bp TTTCTGAAAACTATATATGGCTTTCAAGACTTGCCTTaGGACTCAGAGCTGTTTCACAACCCTTTGTTCCAG +
Preference number: 3 (lower is better)
Translates to: FLKTIYGFQDLP*DSELFHNPLFQ
Trigger: CTGGAACAAAGGGTTGTGAAACAGCTCTGAGTCTCAAGGCAAGTCTTGAAAGCCATATATAGTTTTCAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR GCA 72 bp CCTAAGTTCCACACATACATCTATCATACCATTTGCTaGATGGCATTATCATTGTTTGCACACTCATCCTCT +
Preference number: 3 (lower is better)
Translates to: PKFHTYIYHTIC*MALSLFAHSSS
Trigger: AGAGGATGAGTGTGCAAACAATGATAATGCCATGCAGCAAATGGTATGATAGATGTATGTGTGGAACTTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CCA 72 bp TATTCAAACAGTTTTTGGGAGGTAACACTGTCCCTATaGGAAGACTTGGTATTTTTCAGATTTCCCTGCTGT +
Preference number: 3 (lower is better)
Translates to: YSNSFWEVTLSL*EDLVFFRFPCC
Trigger: ACAGCAGGGAAATCTGAAAAATACCAAGTCTTCCCATAGGGACAGTGTTACCTCCCAAAAACTGTTTGAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR CCA 72 bp GAAAATCCAGTTCAAGCCAATTATTCAAACAGTTTTTaGGAGGTAACACTGTCCCTATGGGAAGACTTGGTA +
Preference number: 3 (lower is better)
Translates to: ENPVQANYSNSF*EVTLSLWEDLV
Trigger: TACCAAGTCTTCCCATAGGGACAGTGTTACCTCCCAAAAACTGTTTGAATAATTGGCTTGAACTGGATTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR CCA 72 bp TCTGTAGATTTGCCTGTTCTGGACAGTTCATTTACATaGAGTCTACAAAATTCAGCAGTCTTTTGTGAGAGG +
Preference number: 3 (lower is better)
Translates to: SVDLPVLDSSFT*SLQNSAVFCER
Trigger: CCTCTCACAAAAGACTGCTGAATTTTGTAGACTCCATGTAAATGAACTGTCCAGAACAGGCAAATCTACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CCA 72 bp TGTGAGCATGTTTTCAATTCTCTTAGGTTTAGAACGTaGAGTAAAATTGCTGGGCCATATGGTAACTGCATT +
Preference number: 3 (lower is better)
Translates to: CEHVFNSLRFRT*SKIAGPYGNCI
Trigger: AATGCAGTTACCATATGGCCCAGCAATTTTACTCCACGTTCTAAACCTAAGAGAATTGAAAACATGCTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR GCA 72 bp TTGCTTTTAATCCTTAGCTTACTAGTTCTTGGCCTATaGAGAAATGCAACTTCTCCTCTTACACAGTATACT +
Preference number: 3 (lower is better)
Translates to: LLLILSLLVLGL*RNATSPLTQYT
Trigger: AGTATACTGTGTAAGAGGAGAAGTTGCATTTCTGCATAGGCCAAGAACTAGTAAGCTAAGGATTAAAAGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR GCA 72 bp CTCTTTGATAATTTTGACTCTGCTGCTTTTTCTGCATaGTATCTCTGGAATGGGTATCGATTAGACTTTGAA +
Preference number: 3 (lower is better)
Translates to: LFDNFDSAAFSA*YLWNGYRLDFE
Trigger: TTCAAAGTCTAATCGATACCCATTCCAGAGATAGCATGCAGAAAAAGCAGCAGAGTCAAAATTATCAAAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CCA 72 bp TTCTATCTGTGTTATAAAGTTCTCAGGTTTAGCATCTaGTTTCCTATGACAACTGGAAAAGACTTCTTGGTG +
Preference number: 3 (lower is better)
Translates to: FYLCYKVLRFSI*FPMTTGKDFLV
Trigger: CACCAAGAAGTCTTTTCCAGTTGTCATAGGAAACCAGATGCTAAACCTGAGAACTTTATAACACAGATAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366976.3
3UTR CCA 72 bp AATTCACGCTATTTATTAATGGCCTTTTACCCAATCTaGGACACTATTACAGTTGTGGCTTTACTCAATCTC +
Preference number: 3 (lower is better)
Translates to: NSRYLLMAFYPI*DTITVVALLNL
Trigger: GAGATTGAGTAAAGCCACAACTGTAATAGTGTCCCAGATTGGGTAAAAGGCCATTAATAAATAGCGTGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CCA 72 bp TATTTTAAACTCTGCTATAACTATGGAGTAAAACTTTaGGCTCTCAAGAGGATTTCAAATCTCAGCTGTCTG +
Preference number: 3 (lower is better)
Translates to: YFKLCYNYGVKL*ALKRISNLSCL
Trigger: CAGACAGCTGAGATTTGAAATCCTCTTGAGAGCCCAAAGTTTTACTCCATAGTTATAGCAGAGTTTAAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CCA 72 bp AATTTTGACTCTGCTGCTTTTTCTGCATGCTATCTCTaGAATGGGTATCGATTAGACTTTGAACTTTATGAA +
Preference number: 3 (lower is better)
Translates to: NFDSAAFSACYL*NGYRLDFELYE
Trigger: TTCATAAAGTTCAAAGTCTAATCGATACCCATTCCAGAGATAGCATGCAGAAAAAGCAGCAGAGTCAAAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR GCA 72 bp AGAGTTAATACTTCCCACTTCGTCAGCTCTTTATTCTaGTGCACTAAATTATATCCATATTGTATGATCTTG +
Preference number: 3 (lower is better)
Translates to: RVNTSHFVSSLF*CTKLYPYCMIL
Trigger: CAAGATCATACAATATGGATATAATTTAGTGCAGCAGAATAAAGAGCTGACGAAGTGGGAAGTATTAACTCT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp GAGGCTGCCAGCCACCTCGGTGGGGTCCTCCCACAATCCTCCATGTGGCACGTGTGTGGACGAAGGGGTTaGTGGGGTGACCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: EAASHLGGVLPQSSMWHVCGRRG*WGDPGS
Trigger: GCTGCCTGGGTCACCCCAGCAACCCCTTCGTCCACA...CACGTGCCACATGGAGGATTGTGGGAGGACCCCACCGAGGTGGCTGGCAGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp GAGGCTGCCAGCCACCTCGGTGGGGTCCTCCCACAATCCTCCATGTGGCACGTGTCCAGCTCCATGTCCTaGGACACCCTACCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: EAASHLGGVLPQSSMWHVSSSMS*DTLPCP
Trigger: GGGGCAGGGTAGGGTGTCCCAGGACATGGAGCTGGA...CACGTGCCACATGGAGGATTGTGGGAGGACCCCACCGAGGTGGCTGGCAGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp GCTGTGTCCTCTCAGAGGCCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACCCCGGTCCCAGGGGCTaGATGGTGTCCCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: AVSSQRPSSPVYSGLGDDPGPRG*MVSLPL
Trigger: CAGAGGGAGGGACACCATCCAGCCCCTGGGACCGGG...GTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGGCCTCTGAGAGGACACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CCA 90 bp TCCTCTCAGAGGCCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACTGCCGACCCGGTCCCAGGGGCTaGATGGTGTCCCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: SSQRPSSPVYSGLGDDCRPGPRG*MVSLPL
Trigger: CAGAGGGAGGGACACCATCCAGCCCCTGGGACCGGG...TCGGCAGTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGGCCTCTGAGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CCA 90 bp GAGGCTGCCAGCCACCTCGGTGGGGTCCTCCCACAATCCTCCATGTGGCACGTGGCTAAGGTGGGAGGATaGCTTGAGTTGCGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: EAASHLGGVLPQSSMWHVAKVGG*LELRGQ
Trigger: CTGCCCCCGCAACTCAAGCCATCCTCCCACCTTAGC...CACGTGCCACATGGAGGATTGTGGGAGGACCCCACCGAGGTGGCTGGCAGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp CCACCGACCACCTGGCTCATCTCAGCTCCCAGCGGCACTGTGTTACCCCTGAGGGGACGAAGGGGTTGCTaGGGTGACCCAGGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: PPTTWLISAPSGTVLPLRGRRGC*GDPGSK
Trigger: CTTGCTGCCTGGGTCACCCCAGCAACCCCTTCGTCC...CCTCAGGGGTAACACAGTGCCGCTGGGAGCTGAGATGAGCCAGGTGGTCGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp CCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACTGCCGAGAGAGGGAGGGCTCTCCATGGTGTCCATaGGAGGCTGCCAGCCACCTC +
Preference number: 4 (lower is better)
Translates to: PSSPVYSGLGDDCREREGSPWCP*EAASHL
Trigger: GAGGTGGCTGGCAGCCTCTCATGGACACCATGGAGA...GCCCTCCCTCTCTCGGCAGTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CCA 90 bp GAGAGGCTGCCAGCCACCTCGGTGGGGTCCTCCCACAATCCTCCATGTGGCACGGGAGAGTGTGCTTCCTaGCTGTGTCCTCTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: ERLPATSVGSSHNPPCGTGECAS*LCPLRG
Trigger: GCCTCTGAGAGGACACAGCCAGGAAGCACACTCTCC...CGTGCCACATGGAGGATTGTGGGAGGACCCCACCGAGGTGGCTGGCAGCCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CCA 90 bp GAGAGGCTGCCAGCCACCTCGGTGGGGTCCTCCCACAATCCTCCATGTGGCACGTCCCTGTACTCTCTCTaGCCCTCTGGTCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: ERLPATSVGSSHNPPCGTSLYSL*PSGLHS
Trigger: GCTGTGGAGACCAGAGGGCCAGAGAGAGTACAGGGA...CGTGCCACATGGAGGATTGTGGGAGGACCCCACCGAGGTGGCTGGCAGCCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CCA 90 bp TGCCAGCCACCTCGGTGGGGTCCTCCCACAATCCTCCATGTGGCACGTGGGGATCTGAGGCTCTGGAGCTaGGGTGTATGGGACCTGGAG +
Preference number: 4 (lower is better)
Translates to: CQPPRWGPPTILHVARGDLRLWS*GVWDLE
Trigger: CTCCAGGTCCCATACACCCCAGCTCCAGAGCCTCAG...ATCCCCACGTGCCACATGGAGGATTGTGGGAGGACCCCACCGAGGTGGCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp GTGTCCTCTCAGAGGCCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACTGCTGGGAGTGCTGGGGGTaGGGAGGCCAGAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: VSSQRPSSPVYSGLGDDCWECWG*GGQSPP
Trigger: TGGTGGACTCTGGCCTCCCCACCCCCAGCACTCCCA...GCAGTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGGCCTCTGAGAGGACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp TTTGTTCTAGGCTTGTGTCCCCCACCGACCACCTGGCTCATCTCAGCTCCCAGCGGCCTTGGAGATGACTaGCGAGAGAGGGAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: FVLGLCPPPTTWLISAPSGLGDD*REREGG
Trigger: CCCGCCCTCCCTCTCTCGGCAGTCATCTCCAAGGCC...GCTGGGAGCTGAGATGAGCCAGGTGGTCGGTGGGGGACACAAGCCTAGAACAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR GCA 90 bp CCACCGACCACCTGGCTCATCTCAGCTCCCAGCGGCACTGTGTTACCCCTGAGGGACCTGGAGCAGGGGTaGCCTACAACTTTGCCCATT +
Preference number: 4 (lower is better)
Translates to: PPTTWLISAPSGTVLPLRDLEQG*PTTLPI
Trigger: AATGGGCAAAGTTGTAGGGCACCCCTGCTCCAGGTC...CCTCAGGGGTAACACAGTGCCGCTGGGAGCTGAGATGAGCCAGGTGGTCGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp GCTGTGTCCTCTCAGAGGCCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACCAATGTCCAGACCGCTaGGCCACTCTGCAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: AVSSQRPSSPVYSGLGDDQCPDR*ATLQSS
Trigger: TGAGGACTGCAGAGTGGCTCAGCGGTCTGGACATTG...GTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGGCCTCTGAGAGGACACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR GCA 90 bp ATTTGTTCTAGGCTTGTGTCCCCCACCGACCACCTGGCTCATCTCAGCTCCCAGGTGTCCATGAGAGGCTaGCAGCCACCTCGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: ICSRLVSPTDHLAHLSSQVSMRG*QPPRWG
Trigger: ACCCCACCGAGGTGGCTGGCAGCCTCTCATGGACAC...CTGGGAGCTGAGATGAGCCAGGTGGTCGGTGGGGGACACAAGCCTAGAACAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR GCA 90 bp TTTGTTCTAGGCTTGTGTCCCCCACCGACCACCTGGCTCATCTCAGCTCCCAGCGCCATCCTGGCTCACTaGAACTTCTGCCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: FVLGLCPPPTTWLISAPSAILAH*NFCLQG
Trigger: GCCCTGGAGGCAGAAGTTGCAGTGAGCCAGGATGGC...GCTGGGAGCTGAGATGAGCCAGGTGGTCGGTGGGGGACACAAGCCTAGAACAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp GTGTCCTCTCAGAGGCCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACTGCTTGCCCAGGCTGGAGTaGGATGGCGTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: VSSQRPSSPVYSGLGDDCLPRLE*DGVILA
Trigger: AGCCAAGATCACGCCATCGCACTCCAGCCTGGGCAA...GCAGTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGGCCTCTGAGAGGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp CCAAATGACTTCTGTGCAACAACAGAGCCGAGCCCGGTCCCAGGGGCTGGATGGGGAGAGTGTGCTTCCTaGCTGTGTCCTCTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: PNDFCATTEPSPVPGAGWGECAS*LCPLRG
Trigger: GCCTCTGAGAGGACACAGCCAGGAAGCACACTCTCC...CCATCCAGCCCCTGGGACCGGGCTCGGCTCTGTTGTTGCACAGAAGTCATTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CCA 90 bp TGCCAGCCACCTCGGTGGGGTCCTCCCACAATCCTCCATGTGGCACGTGGGGATCCTGTCTCTTCATGGTaGGTGAAGAGCACAGGGAGA +
Preference number: 4 (lower is better)
Translates to: CQPPRWGPPTILHVARGDPVSSW*VKSTGR
Trigger: TCTCCCTGTGCTCTTCACCCACCATGAAGAGACAGG...ATCCCCACGTGCCACATGGAGGATTGTGGGAGGACCCCACCGAGGTGGCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CCA 90 bp TCCTCTCAGAGGCCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACTGCCGATCCCTGTACTCTCTCTaGCCCTCTGGTCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: SSQRPSSPVYSGLGDDCRSLYSL*PSGLHS
Trigger: GCTGTGGAGACCAGAGGGCCAGAGAGAGTACAGGGA...TCGGCAGTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGGCCTCTGAGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR GCA 90 bp GTGTCCTCTCAGAGGCCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACTGCGATTCAAAAGTCCACTaGGCATCTCGCAGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: VSSQRPSSPVYSGLGDDCDSKVH*ASRRAG
Trigger: GCCCGCTCTGCGAGATGCGCAGTGGACTTTTGAATC...GCAGTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGGCCTCTGAGAGGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR GCA 90 bp GAGCCACTCTGCAGTCCTCAAATGCAGAGTGATTGGGTCACTCTCCATGGTGTCGGCCTTGGAGATGACTaGCGAGAGAGGGAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: EPLCSPQMQSDWVTLHGVGLGDD*REREGG
Trigger: CCCGCCCTCCCTCTCTCGGCAGTCATCTCCAAGGCC...GACACCATGGAGAGTGACCCAATCACTCTGCATTTGAGGACTGCAGAGTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CCA 90 bp CCAAATGACTTCTGTGCAACAACAGAGCCGAGCCCGGTCCCAGGGGCTGGATGGCGTCCTGTCTCTTCATaGTGGGTGAAGAGCACAGGG +
Preference number: 4 (lower is better)
Translates to: PNDFCATTEPSPVPGAGWRPVSS*WVKSTG
Trigger: CCCTGTGCTCTTCACCCACCATGAAGAGACAGGACG...CCATCCAGCCCCTGGGACCGGGCTCGGCTCTGTTGTTGCACAGAAGTCATTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CCA 90 bp GAGAGGCTGCCAGCCACCTCGGTGGGGTCCTCCCACAATCCTCCATGTGGCACGTGTCCACCTTGTCTCTaGGCACATCTGATGATAACG +
Preference number: 4 (lower is better)
Translates to: ERLPATSVGSSHNPPCGTCPPCL*AHLMIT
Trigger: CGTTATCATCAGATGTGCCCAGAGACAAGGTGGACA...CGTGCCACATGGAGGATTGTGGGAGGACCCCACCGAGGTGGCTGGCAGCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CCA 90 bp ATTTGTTCTAGGCTTGTGTCCCCCACCGACCACCTGGCTCATCTCAGCTCCCAGAGCCTCCTGGGTGGCTaGGACTACAGGTGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: ICSRLVSPTDHLAHLSSQSLLGG*DYRCVP
Trigger: TGGCACACACCTGTAGTCCCAGCCACCCAGGAGGCT...CTGGGAGCTGAGATGAGCCAGGTGGTCGGTGGGGGACACAAGCCTAGAACAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp CCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACTGCCGAGAGAGGGAGGGCATTCTCTTGCACAGCTaGTTCAAAAGTCCACTGCGC +
Preference number: 4 (lower is better)
Translates to: PSSPVYSGLGDDCREREGILLHS*FKSPLR
Trigger: GCGCAGTGGACTTTTGAATCAGCTGTGCAAGAGAAT...GCCCTCCCTCTCTCGGCAGTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR TCA 90 bp CGGGCTCTGGGTCACCCAGCTTCATCCTCTTCATCTTGCCAGTTCACCAGAGGCAGAAACGCAGGGTGCTaGCCCACCATCCAACTGAAG +
Preference number: 4 (lower is better)
Translates to: RALGHPASSSSSCQFTRGRNAGC*PTIQLK
Trigger: CTTCAGTTGGATGGTGGGTCAGCACCCTGCGTTTCT...GCCTCTGGTGAACTGGCAAGATGAAGAGGATGAAGCTGGGTGACCCAGAGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp ATTTGTTCTAGGCTTGTGTCCCCCACCGACCACCTGGCTCATCTCAGCTCCCAGGGCCACAGAGCTACATaGATGGGCACCAAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: ICSRLVSPTDHLAHLSSQGHRAT*MGTKGG
Trigger: ACCTCCCTTGGTGCCCATTCATGTAGCTCTGTGGCC...CTGGGAGCTGAGATGAGCCAGGTGGTCGGTGGGGGACACAAGCCTAGAACAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp GTGTCCTCTCAGAGGCCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACTGCACCGCTGAGCCACTCTaGAGTCCTCAAATGCAGAGT +
Preference number: 4 (lower is better)
Translates to: VSSQRPSSPVYSGLGDDCTAEPL*SPQMQS
Trigger: ACTCTGCATTTGAGGACTGCAGAGTGGCTCAGCGGT...GCAGTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGGCCTCTGAGAGGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR GCA 90 bp CCACCGACCACCTGGCTCATCTCAGCTCCCAGCGGCACTGTGTTACCCCTGAGGACCAGAAACTGCATTTaGCAGCACCTTCTCATGGAC +
Preference number: 4 (lower is better)
Translates to: PPTTWLISAPSGTVLPLRTRNCI*QHLLMD
Trigger: GTCCATGAGAAGGTGCTGGCAAATGCAGTTTCTGGT...CCTCAGGGGTAACACAGTGCCGCTGGGAGCTGAGATGAGCCAGGTGGTCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp GAGAGGCTGCCAGCCACCTCGGTGGGGTCCTCCCACAATCCTCCATGTGGCACGATTAAGTCTAGTGTTTaGAGGAGGGCAAGACTGGGA +
Preference number: 4 (lower is better)
Translates to: ERLPATSVGSSHNPPCGTIKSSV*RRARLG
Trigger: TCCCAGTCTTGCCCTCCTGCAAACACTAGACTTAAT...CGTGCCACATGGAGGATTGTGGGAGGACCCCACCGAGGTGGCTGGCAGCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp CCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACTGCCGAGAGAGGGAGGGCCAAATGCAGAGTGATTaGGTCACTCTCCATGGTGTC +
Preference number: 4 (lower is better)
Translates to: PSSPVYSGLGDDCREREGQMQSD*VTLHGV
Trigger: GACACCATGGAGAGTGACCCAATCACTCTGCATTTG...GCCCTCCCTCTCTCGGCAGTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CCA 90 bp CCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACTGCCGAGAGAGGGAGGGCTGTCAGAGGTTTTCCTaGAAGCAGTCTCTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: PSSPVYSGLGDDCREREGCQRFS*KQSLLV
Trigger: CACCAACAGAGACTGCTTCCAGGAAAACCTCTGACA...GCCCTCCCTCTCTCGGCAGTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp GAGGCTGCCAGCCACCTCGGTGGGGTCCTCCCACAATCCTCCATGTGGCACGTGTTTCTTTGGCCGCAATaGATACCATTTTCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: EAASHLGGVLPQSSMWHVFLWPQ*IPFSLG
Trigger: CCCCAGAGAAAATGGTATCCATTGCGGCCAAAGAAA...CACGTGCCACATGGAGGATTGTGGGAGGACCCCACCGAGGTGGCTGGCAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp GAGAGGCTGCCAGCCACCTCGGTGGGGTCCTCCCACAATCCTCCATGTGGCACGACTGACTTCCAGTTGTaGTGGGTGAAGATTTCACTC +
Preference number: 4 (lower is better)
Translates to: ERLPATSVGSSHNPPCGTTDFQL*WVKISL
Trigger: GAGTGAAATCTTCACCCACCACAACTGGAAGTCAGT...CGTGCCACATGGAGGATTGTGGGAGGACCCCACCGAGGTGGCTGGCAGCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp TCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGTTCCCCGATCCCCTTCTCTGGGGTGTATGGGACCTaGAGCAGGGGTGCCCTACAA +
Preference number: 4 (lower is better)
Translates to: SCQFTRGRRDEGSPIPFSGVYGT*SRGALQ
Trigger: TTGTAGGGCACCCCTGCTCCAGGTCCCATACACCCC...AGAGAAGGGGATCGGGGAACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp GCTGTGTCCTCTCAGAGGCCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACTGGAAGCAGAGTTTGTaGTCAGAAGGCCTCGCTCTG +
Preference number: 4 (lower is better)
Translates to: AVSSQRPSSPVYSGLGDDWKQSL*SEGLAL
Trigger: CAGAGCGAGGCCTTCTGACCACAAACTCTGCTTCCA...GTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGGCCTCTGAGAGGACACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp GAGCCACTCTGCAGTCCTCAAATGCAGAGTGATTGGGTCACTCTCCATGGTGTCTGGTGTCCCTCCCTCTaGTGGACACCAGCACAGCAC +
Preference number: 4 (lower is better)
Translates to: EPLCSPQMQSDWVTLHGVWCPSL*WTPAQH
Trigger: GTGCTGTGCTGGTGTCCATCAGAGGGAGGGACACCA...GACACCATGGAGAGTGACCCAATCACTCTGCATTTGAGGACTGCAGAGTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR TCA 90 bp GTTGGCTCCTCTTCAATGTCCAGACCGCTGAGCCACTCTGCAGTCCTCAAATGCCAATGTCCAGACCGCTaGGCCACTCTGCAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: VGSSSMSRPLSHSAVLKCQCPDR*ATLQSS
Trigger: TGAGGACTGCAGAGTGGCTCAGCGGTCTGGACATTG...GCATTTGAGGACTGCAGAGTGGCTCAGCGGTCTGGACATTGAAGAGGAGCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR TCA 90 bp CCACCGACCACCTGGCTCATCTCAGCTCCCAGCGGCACTGTGTTACCCCTGAGGGAAAAGACTTCTTGGTaGATCCTCTGGAGGTGGATA +
Preference number: 4 (lower is better)
Translates to: PPTTWLISAPSGTVLPLREKTSW*ILWRWI
Trigger: TATCCACCTCCAGAGGATTCACCAAGAAGTCTTTTC...CCTCAGGGGTAACACAGTGCCGCTGGGAGCTGAGATGAGCCAGGTGGTCGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp CCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACTGCCGAGAGAGGGAGGGCTTTTTAGACATCCACTaGCTTCCAGTTGTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: PSSPVYSGLGDDCREREGFLDIH*LPVVVG
Trigger: ACCCACCACAACTGGAAGTCAGTGGATGTCTAAAAA...GCCCTCCCTCTCTCGGCAGTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp CCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACTGCCGAGAGAGGGAGGGCGCTTCCTGCCATGCTTaGCCATTAATGCTGATATTC +
Preference number: 4 (lower is better)
Translates to: PSSPVYSGLGDDCREREGASCHA*PLMLIF
Trigger: GAATATCAGCATTAATGGGCAAGCATGGCAGGAAGC...GCCCTCCCTCTCTCGGCAGTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR GCA 90 bp TCTGACTCGAGGAGGGCCCTCAGCGCAGAGAAAATTAAGTCTAGTGTTTGCAGGCCCTGCCACTCTGGCTaGTCCAGCTCCATGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SDSRRALSAEKIKSSVCRPCHSG*SSSMSW
Trigger: CCAGGACATGGAGCTGGAGCAGCCAGAGTGGCAGGG...CCTGCAAACACTAGACTTAATTTTCTCTGCGCTGAGGGCCCTCCTCGAGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp TCATCCTCTTCATCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGTTCCCCGCCTCCTCACTATCCCTaGCACTCTGGCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SSSSSCQFTRGRRDEGSPPPHYP*HSGCSS
Trigger: GCTGGAGCAGCCAGAGTGGCAGGGATAGTGAGGAGG...CGGGGAACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp ACCCAGCTTCATCCTCTTCATCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGAGGGAGGGCGGGCTCTaGGTCACCCAGCTTCATCCT +
Preference number: 4 (lower is better)
Translates to: TQLHPLHLASSPEAEGMKREGGL*VTQLHP
Trigger: AGGATGAAGCTGGGTGACCCAGAGCCCGCCCTCCCT...CTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGAAGCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CCA 90 bp CCCTCTGATGGACACCAGCACAGCACGGACTTTCCCGTCCTGTCTCTTCATGGTAAGATCCTGAGGCTCTaGAGCTGGGGTGTATGGGAC +
Preference number: 4 (lower is better)
Translates to: PSDGHQHSTDFPVLSLHGKILRL*SWGVWD
Trigger: GTCCCATACACCCCAGCTCCAGAGCCTCAGGATCTT...ACCATGAAGAGACAGGACGGGAAAGTCCGTGCTGTGCTGGTGTCCATCAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp TGCCAGCCACCTCGGTGGGGTCCTCCCACAATCCTCCATGTGGCACGTGGGGATCAGAGTCCACCACTCTaGCAAAGAGCAGTGTTTATT +
Preference number: 4 (lower is better)
Translates to: CQPPRWGPPTILHVARGDQSPPL*QRAVFI
Trigger: AATAAACACTGCTCTTTGCCAGAGTGGTGGACTCTG...ATCCCCACGTGCCACATGGAGGATTGTGGGAGGACCCCACCGAGGTGGCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp TGCCAGCCACCTCGGTGGGGTCCTCCCACAATCCTCCATGTGGCACGTGGGGATGAGATCTCTGGAGAATaGAACACCTTCACAGACAAC +
Preference number: 4 (lower is better)
Translates to: CQPPRWGPPTILHVARGDEISGE*NTFTDN
Trigger: GTTGTCTGTGAAGGTGTTCCATTCTCCAGAGATCTC...ATCCCCACGTGCCACATGGAGGATTGTGGGAGGACCCCACCGAGGTGGCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp CCACCGACCACCTGGCTCATCTCAGCTCCCAGCGGCACTGTGTTACCCCTGAGGCTGTGGCTGGTTTATTaGATTTGTTCTAGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: PPTTWLISAPSGTVLPLRLWLVY*ICSRLV
Trigger: CACAAGCCTAGAACAAATTCAATAAACCAGCCACAG...CCTCAGGGGTAACACAGTGCCGCTGGGAGCTGAGATGAGCCAGGTGGTCGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR TCA 90 bp GAGAGGCTGCCAGCCACCTCGGTGGGGTCCTCCCACAATCCTCCATGTGGCACGTCCTTGTTTCTCTGCTaGATACTTCAGAGCAAATCT +
Preference number: 4 (lower is better)
Translates to: ERLPATSVGSSHNPPCGTSLFLC*ILQSKS
Trigger: AGATTTGCTCTGAAGTATTCAGCAGAGAAACAAGGA...CGTGCCACATGGAGGATTGTGGGAGGACCCCACCGAGGTGGCTGGCAGCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp TCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGTTCCCCGATCCCCTTCTCTGATTCAAAAGTCCACTaGGCATCTCGCAGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: SCQFTRGRRDEGSPIPFSDSKVH*ASRRAG
Trigger: GCCCGCTCTGCGAGATGCGCAGTGGACTTTTGAATC...AGAGAAGGGGATCGGGGAACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR GCA 90 bp TGCCAGCCACCTCGGTGGGGTCCTCCCACAATCCTCCATGTGGCACGTGGGGATTTATCTGAAGCTTCCTaGCATGCTTGCCCATTAATG +
Preference number: 4 (lower is better)
Translates to: CQPPRWGPPTILHVARGDLSEAS*HACPLM
Trigger: CATTAATGGGCAAGCATGGCAGGAAGCTTCAGATAA...ATCCCCACGTGCCACATGGAGGATTGTGGGAGGACCCCACCGAGGTGGCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR GCA 90 bp CTCTGGAGGTGGATAACAGGCTGCATCCTGAGAACTTGGGAAAATCCCTCTCCTCAGCCCGCTTCGAGGTaGAGCGCACCCGAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: LWRWITGCILRTWENPSPQPASR*SAPESL
Trigger: AAGACTTTCGGGTGCGCTGCACCTCGAAGCGGGCTG...AGGAGAGGGATTTTCCCAAGTTCTCAGGATGCAGCCTGTTATCCACCTCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366976.3
ENST00000626725.1
CDS-3UTR CCA 90 bp GAGAGGCTGCCAGCCACCTCGGTGGGGTCCTCCCACAATCCTCCATGTGGCACGATTCCAGGATCTTTCTaGGATACTGCTTACGTTTTG +
Preference number: 4 (lower is better)
Translates to: ERLPATSVGSSHNPPCGTIPGSF*DTAYVL
Trigger: CAAAACGTAAGCAGTATCCCAGAAAGATCCTGGAAT...CGTGCCACATGGAGGATTGTGGGAGGACCCCACCGAGGTGGCTGGCAGCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CCA 90 bp CCAAATGACTTCTGTGCAACAACAGAGCCGAGCCCGGTCCCAGGGGCTGGATGGATATTGTCTGGCACATaGCTGGGAAAGATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PNDFCATTEPSPVPGAGWILSGT*LGKILR
Trigger: CCTCAGGATCTTTCCCAGCCATGTGCCAGACAATAT...CCATCCAGCCCCTGGGACCGGGCTCGGCTCTGTTGTTGCACAGAAGTCATTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp TCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGTTCCCCGATCCCCTTCTCTTGGTCTATAGACCGCTaGGAAGGTGGCCAGGCACTT +
Preference number: 4 (lower is better)
Translates to: SCQFTRGRRDEGSPIPFSWSIDR*EGGQAL
Trigger: AAGTGCCTGGCCACCTTCCCAGCGGTCTATAGACCA...AGAGAAGGGGATCGGGGAACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp ATTTGTTCTAGGCTTGTGTCCCCCACCGACCACCTGGCTCATCTCAGCTCCCAGTTTTGGGTCTGTCTTTaGTGCTGGAGACGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: ICSRLVSPTDHLAHLSSQFWVCL*CWRRSS
Trigger: TGAGGAGCGTCTCCAGCATCAAAGACAGACCCAAAA...CTGGGAGCTGAGATGAGCCAGGTGGTCGGTGGGGGACACAAGCCTAGAACAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp CTTTCAAGACTTGCCTTGAGACTCAGAGCTGTTTCACAACCCTTTGTTCCAGGCGGTGGGAGGATGGCTTaGGTTGCGGGGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LSRLALRLRAVSQPFVPGGGRMA*VAGAEV
Trigger: AACCTCTGCCCCCGCAACTCAAGCCATCCTCCCACC...GCCTGGAACAAAGGGTTGTGAAACAGCTCTGAGTCTCAAGGCAAGTCTTGAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp TTCCAAACCCATGAGTTTCACTCTCAGGTTCCCTCTAGGAGCAGAAGTGCAGGTGGCGAGTGGATCACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: FQTHEFHSQVPSRSRSAGGEWIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCCACTCGCC...ACCTGCACTTCTGCTCCTAGAGGGAACCTGAGAGTGAAACTCATGGGTTTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp TCCTCTCAGAGGCCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACTGCCGAAAGTTTCCAAACCCATaGGTTTCACTCTCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: SSQRPSSPVYSGLGDDCRKFPNP*VSLSGS
Trigger: GGAACCTGAGAGTGAAACTCATGGGTTTGGAAACTT...TCGGCAGTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGGCCTCTGAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp CTCTGCAGTCCTCAAATGCAGAGTGATTGGGTCACTCTCCATGGTGTCCATGAGAGCGGTGAGAGCGTCTaGGACTCTGGACAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: LCSPQMQSDWVTLHGVHESGESV*DSGQGL
Trigger: AAGGCCTTGTCCAGAGTCTCAGACGCTCTCACCGCT...CTCATGGACACCATGGAGAGTGACCCAATCACTCTGCATTTGAGGACTGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp GAGGCTGCCAGCCACCTCGGTGGGGTCCTCCCACAATCCTCCATGTGGCACGTGTTATTAGATGAAAAATaGAGCCTCTCACATCAGTGG +
Preference number: 4 (lower is better)
Translates to: EAASHLGGVLPQSSMWHVLLDEK*SLSHQW
Trigger: CCACTGATGTGAGAGGCTGCATTTTTCATCTAATAA...CACGTGCCACATGGAGGATTGTGGGAGGACCCCACCGAGGTGGCTGGCAGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR GCA 90 bp AATCCTCTGGAGGTGGATAACAGGCTGCATCCTGAGAACTTGGGAAAATCCCTCCAGCCCGCTTCGAGGTaGAGCGCACCCGAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: NPLEVDNRLHPENLGKSLQPASR*SAPESL
Trigger: AAGACTTTCGGGTGCGCTGCACCTCGAAGCGGGCTG...GAGGGATTTTCCCAAGTTCTCAGGATGCAGCCTGTTATCCACCTCCAGAGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366976.3
ENST00000626725.1
CDS-3UTR GCA 90 bp ATTTGTTCTAGGCTTGTGTCCCCCACCGACCACCTGGCTCATCTCAGCTCCCAGGGGACTACAGGTGTGTaGCATCACACCCTGCTAATT +
Preference number: 4 (lower is better)
Translates to: ICSRLVSPTDHLAHLSSQGTTGV*HHTLLI
Trigger: AATTAGCAGGGTGTGATGGCACACACCTGTAGTCCC...CTGGGAGCTGAGATGAGCCAGGTGGTCGGTGGGGGACACAAGCCTAGAACAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp GTTGGCTCCTCTTCAATGTCCAGACCGCTGAGCCACTCTGCAGTCCTCAAATGCAGACACCAGAGAGCTTaGACTCTGTCCCTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: VGSSSMSRPLSHSAVLKCRHQRA*TLSLSP
Trigger: TGGAGAGAGGGACAGAGTGCAAGCTCTCTGGTGTCT...GCATTTGAGGACTGCAGAGTGGCTCAGCGGTCTGGACATTGAAGAGGAGCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp CAGCTTCATCCTCTTCATCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGTTCAGCCTCAGGTGATCTaGCTGTCTCGGCCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: QLHPLHLASSPEAEGMKVQPQVI*LSRPPK
Trigger: CTTGGGAGGCCGAGACAGGCAGATCACCTGAGGCTG...AACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp CCCTCTGATGGACACCAGCACAGCACGGACTTTCCCGTCCTGTCTCTTCATGGTCTCTTCTGGTGGAGATaGTCGGCTATAAAACGGCTC +
Preference number: 4 (lower is better)
Translates to: PSDGHQHSTDFPVLSLHGLFWWR*SAIKRL
Trigger: GAGCCGTTTTATAGCCGAGCATCTCCACCAGAAGAG...ACCATGAAGAGACAGGACGGGAAAGTCCGTGCTGTGCTGGTGTCCATCAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp CCACCGACCACCTGGCTCATCTCAGCTCCCAGCGGCACTGTGTTACCCCTGAGGGGTGCCCTACAACTTTaGCCATTTTTATTATTCTGC +
Preference number: 4 (lower is better)
Translates to: PPTTWLISAPSGTVLPLRGALQL*PFLLFC
Trigger: GCAGAATAATAAAAATGGGCAAAGTTGTAGGGCACC...CCTCAGGGGTAACACAGTGCCGCTGGGAGCTGAGATGAGCCAGGTGGTCGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp GAGCCACTCTGCAGTCCTCAAATGCAGAGTGATTGGGTCACTCTCCATGGTGTCCGTCCTGTCTCTTCATaGTGGGTGAAGAGCACAGGG +
Preference number: 4 (lower is better)
Translates to: EPLCSPQMQSDWVTLHGVRPVSS*WVKSTG
Trigger: CCCTGTGCTCTTCACCCACCATGAAGAGACAGGACG...GACACCATGGAGAGTGACCCAATCACTCTGCATTTGAGGACTGCAGAGTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CCA 90 bp TCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGTTCCCCGATCCCCTTCTCTCCACAATCCTCCATGTaGCACGTGGGGATCTCCAAA +
Preference number: 4 (lower is better)
Translates to: SCQFTRGRRDEGSPIPFSPQSSM*HVGISK
Trigger: TTTGGAGATCCCCACGTGCCACATGGAGGATTGTGG...AGAGAAGGGGATCGGGGAACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CCA 90 bp CGGGCTCTGGGTCACCCAGCTTCATCCTCTTCATCTTGCCAGTTCACCAGAGGCCAAATGCAGAGTGATTaGGTCACTCTCCATGGTGTC +
Preference number: 4 (lower is better)
Translates to: RALGHPASSSSSCQFTRGQMQSD*VTLHGV
Trigger: GACACCATGGAGAGTGACCCAATCACTCTGCATTTG...GCCTCTGGTGAACTGGCAAGATGAAGAGGATGAAGCTGGGTGACCCAGAGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CCA 90 bp AGGTGGATAACAGGCTGCATCCTGAGAACTTGGGAAAATCCCTCTCCTTGTTCAAGTCTTCTCGGGGAGTaGCGGAGACCAAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: RWITGCILRTWENPSPCSSLLGE*RRPRPG
Trigger: GCCAGGCCTTGGTCTCCGCCACTCCCCGAGAAGACT...TGAACAAGGAGAGGGATTTTCCCAAGTTCTCAGGATGCAGCCTGTTATCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626725.1
CDS-3UTR CCA 90 bp GAGGCTGCCAGCCACCTCGGTGGGGTCCTCCCACAATCCTCCATGTGGCACGTGGTATTCTCTTGTGCCTaGCTTTGCTTCTTTTATTCA +
Preference number: 4 (lower is better)
Translates to: EAASHLGGVLPQSSMWHVVFSCA*LCFFYS
Trigger: TGAATAAAAGAAGCAAAGCCAGGCACAAGAGAATAC...CACGTGCCACATGGAGGATTGTGGGAGGACCCCACCGAGGTGGCTGGCAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp CCACCGACCACCTGGCTCATCTCAGCTCCCAGCGGCACTGTGTTACCCCTGAGGATTATTCCAGGTGGATaGAACAAAGATTCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: PPTTWLISAPSGTVLPLRIIPGG*NKDSCH
Trigger: ATGGCAGGAATCTTTGTTCCATCCACCTGGAATAAT...CCTCAGGGGTAACACAGTGCCGCTGGGAGCTGAGATGAGCCAGGTGGTCGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp CCACCGACCACCTGGCTCATCTCAGCTCCCAGCGGCACTGTGTTACCCCTGAGGAGCAATTATTCCAGGTaGATGGAACAAAGATTCCTG +
Preference number: 4 (lower is better)
Translates to: PPTTWLISAPSGTVLPLRSNYSR*MEQRFL
Trigger: CAGGAATCTTTGTTCCATCCACCTGGAATAATTGCT...CCTCAGGGGTAACACAGTGCCGCTGGGAGCTGAGATGAGCCAGGTGGTCGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp GCTGTGTCCTCTCAGAGGCCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACACATATGGATTGTACTaGTTGGCACAGAAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: AVSSQRPSSPVYSGLGDDTYGLY*LAQKPP
Trigger: AGGAGGCTTCTGTGCCAACCAGTACAATCCATATGT...GTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGGCCTCTGAGAGGACACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp TGCCAGCCACCTCGGTGGGGTCCTCCCACAATCCTCCATGTGGCACGTGGGGATTGTCCTGCAGGGATATaGGAATTAGACTTAGTTCTA +
Preference number: 4 (lower is better)
Translates to: CQPPRWGPPTILHVARGDCPAGI*ELDLVL
Trigger: TAGAACTAAGTCTAATTCCCATATCCCTGCAGGACA...ATCCCCACGTGCCACATGGAGGATTGTGGGAGGACCCCACCGAGGTGGCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp AATGTCCAGACCGCTGAGCCACTCTGCAGTCCTCAAATGCAGAGTGATTGGGTCGAGTTGTGTGGAGGGTaGCATTCCCATCAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: NVQTAEPLCSPQMQSDWVELCGG*HSHQGG
Trigger: GCCACCTTGATGGGAATGCCACCCTCCACACAACTC...GACCCAATCACTCTGCATTTGAGGACTGCAGAGTGGCTCAGCGGTCTGGACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp ATTTGTTCTAGGCTTGTGTCCCCCACCGACCACCTGGCTCATCTCAGCTCCCAGTCGCTCTGCTCTACATaGTCTATAGACCGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: ICSRLVSPTDHLAHLSSQSLCST*SIDRWE
Trigger: TTCCCAGCGGTCTATAGACCATGTAGAGCAGAGCGA...CTGGGAGCTGAGATGAGCCAGGTGGTCGGTGGGGGACACAAGCCTAGAACAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp CCCTCTGATGGACACCAGCACAGCACGGACTTTCCCGTCCTGTCTCTTCATGGTCTCTCTGGAAGAAAATaGAAGGATCAGATGTCCCCC +
Preference number: 4 (lower is better)
Translates to: PSDGHQHSTDFPVLSLHGLSGRK*KDQMSP
Trigger: GGGGGACATCTGATCCTTTCATTTTCTTCCAGAGAG...ACCATGAAGAGACAGGACGGGAAAGTCCGTGCTGTGCTGGTGTCCATCAGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR TCA 90 bp CTTTCAAGACTTGCCTTGAGACTCAGAGCTGTTTCACAACCCTTTGTTCCAGGCATTCCCAGCCTCAGGTaGTCTGCCTGTCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: LSRLALRLRAVSQPFVPGIPSLR*SACLGL
Trigger: GAGGCCGAGACAGGCAGATCACCTGAGGCTGGGAAT...GCCTGGAACAAAGGGTTGTGAAACAGCTCTGAGTCTCAAGGCAAGTCTTGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp CCAAATGACTTCTGTGCAACAACAGAGCCGAGCCCGGTCCCAGGGGCTGGATGGCCTGCAGGGAGAAGTTaGATTTTCTTCTCTAGCTAT +
Preference number: 4 (lower is better)
Translates to: PNDFCATTEPSPVPGAGWPAGRS*IFFSSY
Trigger: ATAGCTAGAGAAGAAAATTCAACTTCTCCCTGCAGG...CCATCCAGCCCCTGGGACCGGGCTCGGCTCTGTTGTTGCACAGAAGTCATTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp CTCTGCAGTCCTCAAATGCAGAGTGATTGGGTCACTCTCCATGGTGTCCATGAGGGTCTCCACAGCAAATaGCCCTGTCCACCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: LCSPQMQSDWVTLHGVHEGLHSK*PCPPCL
Trigger: GAGACAAGGTGGACAGGGGCATTTGCTGTGGAGACC...CTCATGGACACCATGGAGAGTGACCCAATCACTCTGCATTTGAGGACTGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR GCA 90 bp ACCCAGCTTCATCCTCTTCATCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGGTCTCCACAGCAAATaGCCCTGTCCACCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: TQLHPLHLASSPEAEGMKGLHSK*PCPPCL
Trigger: GAGACAAGGTGGACAGGGGCATTTGCTGTGGAGACC...CTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGAAGCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR GCA 90 bp TCATCCTCTTCATCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGTTCCCCGAGGGAGAAGAAGAGGTaGTGGAGCCATCTATCCAGG +
Preference number: 4 (lower is better)
Translates to: SSSSSCQFTRGRRDEGSPREKKR*WSHLSR
Trigger: CCTGGATAGATGGCTCCAGCACCTCTTCTTCTCCCT...CGGGGAACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR GCA 90 bp TCAATGTCCAGACCGCTGAGCCACTCTGCAGTCCTCAAATGCAGAGTGATTGGGAGGGAGAAGAAGAGGTaGTGGAGCCATCTATCCAGG +
Preference number: 4 (lower is better)
Translates to: SMSRPLSHSAVLKCRVIGREKKR*WSHLSR
Trigger: CCTGGATAGATGGCTCCAGCACCTCTTCTTCTCCCT...CCCAATCACTCTGCATTTGAGGACTGCAGAGTGGCTCAGCGGTCTGGACATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR GCA 90 bp CCACCGACCACCTGGCTCATCTCAGCTCCCAGCGGCACTGTGTTACCCCTGAGGTTATTAGATGAAAAATaGAGCCTCTCACATCAGTGG +
Preference number: 4 (lower is better)
Translates to: PPTTWLISAPSGTVLPLRLLDEK*SLSHQW
Trigger: CCACTGATGTGAGAGGCTGCATTTTTCATCTAATAA...CCTCAGGGGTAACACAGTGCCGCTGGGAGCTGAGATGAGCCAGGTGGTCGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR GCA 90 bp TCAGTACCATGTCAGAGGTTTTCCTGGAAGCAGTCTCTGTTGGTGTGGTTTCTAAGGCCTGGCTCTCTGTaGCAGCCGCGAGCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SVPCQRFSWKQSLLVWFLRPGSL*QPRAPC
Trigger: ACAAGGAGCTCGCGGCTGGCACAGAGAGCCAGGCCT...TAGAAACCACACCAACAGAGACTGCTTCCAGGAAAACCTCTGACATGGTACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366976.3
CDS-3UTR GCA 90 bp CCAAATGACTTCTGTGCAACAACAGAGCCGAGCCCGGTCCCAGGGGCTGGATGGTGGCCTATGCAGAAATaGAACTTCTCCTCTTACACA +
Preference number: 4 (lower is better)
Translates to: PNDFCATTEPSPVPGAGWWPMQK*NFSSYT
Trigger: TGTGTAAGAGGAGAAGTTGCATTTCTGCATAGGCCA...CCATCCAGCCCCTGGGACCGGGCTCGGCTCTGTTGTTGCACAGAAGTCATTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp TCAATGTCCAGACCGCTGAGCCACTCTGCAGTCCTCAAATGCAGAGTGATTGGGGCTCACTGCAACTTCTaGCTCCAGGGCTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: SMSRPLSHSAVLKCRVIGAHCNF*LQGSSD
Trigger: ATCACTTGAGCCCTGGAGGCAGAAGTTGCAGTGAGC...CCCAATCACTCTGCATTTGAGGACTGCAGAGTGGCTCAGCGGTCTGGACATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp TGCCAGCCACCTCGGTGGGGTCCTCCCACAATCCTCCATGTGGCACGTGGGGATCATGAAAGTTCAACCTaGTGCTACAAACATTTGTGT +
Preference number: 4 (lower is better)
Translates to: CQPPRWGPPTILHVARGDHESST*CYKHLC
Trigger: ACACAAATGTTTGTAGCAGCAGGTTGAACTTTCATG...ATCCCCACGTGCCACATGGAGGATTGTGGGAGGACCCCACCGAGGTGGCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp TCCTCTCAGAGGCCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACTGCCGACATCTAACTGTTCAGTaGCTGTGCTGTACTAATTGC +
Preference number: 4 (lower is better)
Translates to: SSQRPSSPVYSGLGDDCRHLTVQ*LCCTNC
Trigger: GCAATTAGTACAGCACAGGCACTGAACAGTTAGATG...TCGGCAGTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGGCCTCTGAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp CGGGCTCTGGGTCACCCAGCTTCATCCTCTTCATCTTGCCAGTTCACCAGAGGCACTGAGGGATGTCAATaGCATCCTCTGCTCTTATGT +
Preference number: 4 (lower is better)
Translates to: RALGHPASSSSSCQFTRGTEGCQ*HPLLLC
Trigger: ACATAAGAGCAGAGGATGGCATTGACATCCCTCAGT...GCCTCTGGTGAACTGGCAAGATGAAGAGGATGAAGCTGGGTGACCCAGAGCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp GCTGTGTCCTCTCAGAGGCCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACCTCAGGTTTAGCATCTaGTTTCCTATGACAACTGGA +
Preference number: 4 (lower is better)
Translates to: AVSSQRPSSPVYSGLGDDLRFSI*FPMTTG
Trigger: TCCAGTTGTCATAGGAAACCAGATGCTAAACCTGAG...GTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGGCCTCTGAGAGGACACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp TCATCCTCTTCATCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGTTCCCCGGCCAGCACCTTCTCATaGACTTCTAGCCTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: SSSSSCQFTRGRRDEGSPASTFS*TSSLQN
Trigger: GTTCTGGAGGCTAGAAGTCCATGAGAAGGTGCTGGC...CGGGGAACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp GTGTCCTCTCAGAGGCCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACTGCACTCATCCTCTTCACTaGAATATGACCTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: VSSQRPSSPVYSGLGDDCTHPLH*NMTFLK
Trigger: CTTCAGGAAGGTCATATTCCAGTGAAGAGGATGAGT...GCAGTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGGCCTCTGAGAGGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp GTTGGCTCCTCTTCAATGTCCAGACCGCTGAGCCACTCTGCAGTCCTCAAATGCTTTTTAAGAATGAAATaGGCCGGGCGTGGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: VGSSSMSRPLSHSAVLKCFLRMK*AGRGGS
Trigger: TGAGCCGCCACGCCCGGCCCATTTCATTCTTAAAAA...GCATTTGAGGACTGCAGAGTGGCTCAGCGGTCTGGACATTGAAGAGGAGCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp TTTGTTCTAGGCTTGTGTCCCCCACCGACCACCTGGCTCATCTCAGCTCCCAGCTATCCGCTCTTCTGGTaGAGATGCTCGGCTATAAAA +
Preference number: 4 (lower is better)
Translates to: FVLGLCPPPTTWLISAPSYPLFW*RCSAIK
Trigger: TTTTATAGCCGAGCATCTCCACCAGAAGAGCGGATA...GCTGGGAGCTGAGATGAGCCAGGTGGTCGGTGGGGGACACAAGCCTAGAACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CAA 72 bp GCGCCAAGTCTCAGGTATTTATGGACTGGTGAAGAGTaGTGTGGAGGGTGGCATTCCCATCAAGGTGGCATC +
Preference number: 4 (lower is better)
Translates to: APSLRYLWTGEE*CGGWHSHQGGI
Trigger: GATGCCACCTTGATGGGAATGCCACCCTCCACACAACTCTTCACCAGTCCATAAATACCTGAGACTTGGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp TCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGTTCCCCGATCCCCTTCTCTATTCTCTTGCACAGCTaGTTCAAAAGTCCACTGCGC +
Preference number: 4 (lower is better)
Translates to: SCQFTRGRRDEGSPIPFSILLHS*FKSPLR
Trigger: GCGCAGTGGACTTTTGAATCAGCTGTGCAAGAGAAT...AGAGAAGGGGATCGGGGAACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR TCA 90 bp GGAGGTGGTCATCTACAAGTCGGGAAGACAGCCCTCACCAGAAACTGCATTTGCTCCTCAAATGCAGAGTaGTTGGGTCACTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: GGGHLQVGKTALTRNCICSSNAE*LGHSPW
Trigger: CCATGGAGAGTGACCCAATCACTCTGCATTTGAGGA...GCAAATGCAGTTTCTGGTGAGGGCTGTCTTCCCGACTTGTAGATGACCACCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp GAGCCACTCTGCAGTCCTCAAATGCAGAGTGATTGGGTCACTCTCCATGGTGTCTCCTCAAATGCAGAGTaGTTGGGTCACTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: EPLCSPQMQSDWVTLHGVSSNAE*LGHSPW
Trigger: CCATGGAGAGTGACCCAATCACTCTGCATTTGAGGA...GACACCATGGAGAGTGACCCAATCACTCTGCATTTGAGGACTGCAGAGTGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR TCA 90 bp CCAAATGACTTCTGTGCAACAACAGAGCCGAGCCCGGTCCCAGGGGCTGGATGGTGGGGACCTCTGAAGTaGAACAAATCATACAGAATT +
Preference number: 4 (lower is better)
Translates to: PNDFCATTEPSPVPGAGWWGPLK*NKSYRI
Trigger: AATTCTGTATGATTTGTTTCACTTCAGAGGTCCCCA...CCATCCAGCCCCTGGGACCGGGCTCGGCTCTGTTGTTGCACAGAAGTCATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp AGGGCCTCCACACCCCACCTTACTGCTTTAACCAATGTCCATCTAACTGTTCAGTGCTGCAAAGGGCAGTaGTGTGTGGACGAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: RASTPHLTALTNVHLTVQCCKGQ*CVDEGV
Trigger: AACCCCTTCGTCCACACATCACTGCCCTTTGCAGCA...CTGAACAGTTAGATGGACATTGGTTAAAGCAGTAAGGTGGGGTGTGGAGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp AGGGCCTCCACACCCCACCTTACTGCTTTAACCAATGTCCATCTAACTGTTCAGCCCCTTCCAAATTACTaGGGGGCAGTAAGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: RASTPHLTALTNVHLTVQPLPNY*GAVSPG
Trigger: GCCAGGACTTACTGCCCCTCAGTAATTTGGAAGGGG...CTGAACAGTTAGATGGACATTGGTTAAAGCAGTAAGGTGGGGTGTGGAGGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp AGGCTAGTCAAGGTGATGATAGAAATGCCCAATCTTTTACACAGGCACAGGAGTGTGTCCATGAGAGGCTaGCAGCCACCTCGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: RLVKVMIEMPNLLHRHRSVSMRG*QPPRWG
Trigger: ACCCCACCGAGGTGGCTGGCAGCCTCTCATGGACAC...ACTCCTGTGCCTGTGTAAAAGATTGGGCATTTCTATCATCACCTTGACTAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp ACTTGGGAAAATCCCTCTCCTTGTTCAATTAATGCAGGCAAGGACTTCATGGCTAGGCCTGGCTCTCTGTaGCAGCCGCGAGCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: TWENPSPCSINAGKDFMARPGSL*QPRAPC
Trigger: ACAAGGAGCTCGCGGCTGGCACAGAGAGCCAGGCCT...AGCCATGAAGTCCTTGCCTGCATTAATTGAACAAGGAGAGGGATTTTCCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626725.1
CDS-3UTR GCA 90 bp TCCTCTCAGAGGCCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACTGCCGAGGATGTATTCTCTTGTaGCTGGCTTTGCTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: SSQRPSSPVYSGLGDDCRGCILL*LALLLL
Trigger: TAAAAGAAGCAAAGCCAGGCACAAGAGAATACATCC...TCGGCAGTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGGCCTCTGAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp TCCTCTCAGAGGCCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACTGCCGAATTCCAGGATCTTTCTaGGATACTGCTTACGTTTTG +
Preference number: 4 (lower is better)
Translates to: SSQRPSSPVYSGLGDDCRIPGSF*DTAYVL
Trigger: CAAAACGTAAGCAGTATCCCAGAAAGATCCTGGAAT...TCGGCAGTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGGCCTCTGAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CCA 90 bp TGCCAGCCACCTCGGTGGGGTCCTCCCACAATCCTCCATGTGGCACGTGGGGATGTACTATTCAATAAATaGTGTCAGAACAGGTGGTTA +
Preference number: 4 (lower is better)
Translates to: CQPPRWGPPTILHVARGDVLFNK*CQNRWL
Trigger: TAACCACCTGTTCTGACACCATTTATTGAATAGTAC...ATCCCCACGTGCCACATGGAGGATTGTGGGAGGACCCCACCGAGGTGGCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CCA 90 bp CCAAATGACTTCTGTGCAACAACAGAGCCGAGCCCGGTCCCAGGGGCTGGATGGGGTATTCCTCAGGTCTaGGAATGTTTCTTGTGTTAT +
Preference number: 4 (lower is better)
Translates to: PNDFCATTEPSPVPGAGWGIPQV*ECFLCY
Trigger: ATAACACAAGAAACATTCCCAGACCTGAGGAATACC...CCATCCAGCCCCTGGGACCGGGCTCGGCTCTGTTGTTGCACAGAAGTCATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp AATGTCCAGACCGCTGAGCCACTCTGCAGTCCTCAAATGCAGAGTGATTGGGTCCTCTCTGGAAGAAAATaGAAGGATCAGATGTCCCCC +
Preference number: 4 (lower is better)
Translates to: NVQTAEPLCSPQMQSDWVLSGRK*KDQMSP
Trigger: GGGGGACATCTGATCCTTTCATTTTCTTCCAGAGAG...GACCCAATCACTCTGCATTTGAGGACTGCAGAGTGGCTCAGCGGTCTGGACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR TCA 90 bp AATGTCCAGACCGCTGAGCCACTCTGCAGTCCTCAAATGCAGAGTGATTGGGTCCAATCTGAACCCAGATaGTCTGGCTCAGAGACTATG +
Preference number: 4 (lower is better)
Translates to: NVQTAEPLCSPQMQSDWVQSEPR*SGSETM
Trigger: CATAGTCTCTGAGCCAGATCATCTGGGTTCAGATTG...GACCCAATCACTCTGCATTTGAGGACTGCAGAGTGGCTCAGCGGTCTGGACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp TCATCCTCTTCATCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGTTCCCCGTCTGCAGTCCTCAAATaGAGAGTGATTGGGTCACTC +
Preference number: 4 (lower is better)
Translates to: SSSSSCQFTRGRRDEGSPSAVLK*RVIGSL
Trigger: GAGTGACCCAATCACTCTGCATTTGAGGACTGCAGA...CGGGGAACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR GCA 90 bp ATCTGCACATCACTTATACCATTTGGTGAGATCTCTGGAGAATGGAACACCTTCAGGCCTGGCTCTCTGTaGCAGCCGCGAGCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: ICTSLIPFGEISGEWNTFRPGSL*QPRAPC
Trigger: ACAAGGAGCTCGCGGCTGGCACAGAGAGCCAGGCCT...GAAGGTGTTCCATTCTCCAGAGATCTCACCAAATGGTATAAGTGATGTGCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp ACCCAGCTTCATCCTCTTCATCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGGAGTTTCACTATGTTaGCCAGGCTGGGCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: TQLHPLHLASSPEAEGMKGVSLC*PGWAQV
Trigger: TACTTGAGCCCAGCCTGGGCAACATAGTGAAACTCC...CTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGAAGCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp GAGCCACTCTGCAGTCCTCAAATGCAGAGTGATTGGGTCACTCTCCATGGTGTCGATTTCACTCCCCACTaGCATGTCAAAGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: EPLCSPQMQSDWVTLHGVDFTPH*HVKAGV
Trigger: AACACCAGCTTTGACATGGCAGTGGGGAGTGAAATC...GACACCATGGAGAGTGACCCAATCACTCTGCATTTGAGGACTGCAGAGTGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp AGGGCCTCCACACCCCACCTTACTGCTTTAACCAATGTCCATCTAACTGTTCAGCCTCCATGTGGCACGTaGGGATCTCCAAATGACTTC +
Preference number: 4 (lower is better)
Translates to: RASTPHLTALTNVHLTVQPPCGT*GSPNDF
Trigger: GAAGTCATTTGGAGATCCCCACGTGCCACATGGAGG...CTGAACAGTTAGATGGACATTGGTTAAAGCAGTAAGGTGGGGTGTGGAGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp GTTGGCTCCTCTTCAATGTCCAGACCGCTGAGCCACTCTGCAGTCCTCAAATGCAGCCTCTCACATCAGTaGGGGAAAAGAGGTACTATT +
Preference number: 4 (lower is better)
Translates to: VGSSSMSRPLSHSAVLKCSLSHQ*GKRGTI
Trigger: AATAGTACCTCTTTTCCCCCACTGATGTGAGAGGCT...GCATTTGAGGACTGCAGAGTGGCTCAGCGGTCTGGACATTGAAGAGGAGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CCA 90 bp AGGTGGATAACAGGCTGCATCCTGAGAACTTGGGAAAATCCCTCTCCTTGTTCAGAGCTCCTTGTCCCATaGAGGGTCAAGGACCACCAA +
Preference number: 4 (lower is better)
Translates to: RWITGCILRTWENPSPCSELLVP*RVKDHQ
Trigger: TTGGTGGTCCTTGACCCTCCATGGGACAAGGAGCTC...TGAACAAGGAGAGGGATTTTCCCAAGTTCTCAGGATGCAGCCTGTTATCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626725.1
CDS-3UTR CCA 90 bp TTTCCTATGACAACTGGAAAAGACTTCTTGGTGAATCCTCTGGAGGTGGATAACAGTCTTCTCGGGGAGTaGCGGAGACCAAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: FPMTTGKDFLVNPLEVDNSLLGE*RRPRPG
Trigger: GCCAGGCCTTGGTCTCCGCCACTCCCCGAGAAGACT...GTTATCCACCTCCAGAGGATTCACCAAGAAGTCTTTTCCAGTTGTCATAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366976.3
ENST00000626725.1
CDS-3UTR CCA 90 bp GTTGGCTCCTCTTCAATGTCCAGACCGCTGAGCCACTCTGCAGTCCTCAAATGCGGATACCATTTTCTCTaGGGGCAGTCTTTAGTTTGC +
Preference number: 4 (lower is better)
Translates to: VGSSSMSRPLSHSAVLKCGYHFL*GQSLVC
Trigger: GCAAACTAAAGACTGCCCCCAGAGAAAATGGTATCC...GCATTTGAGGACTGCAGAGTGGCTCAGCGGTCTGGACATTGAAGAGGAGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp CCAAATGACTTCTGTGCAACAACAGAGCCGAGCCCGGTCCCAGGGGCTGGATGGTATGGAGTAAAACTTTaGGCTCTCAAGAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: PNDFCATTEPSPVPGAGWYGVKL*ALKRIS
Trigger: TGAAATCCTCTTGAGAGCCCAAAGTTTTACTCCATA...CCATCCAGCCCCTGGGACCGGGCTCGGCTCTGTTGTTGCACAGAAGTCATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp ACCCAGCTTCATCCTCTTCATCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGTCCTATCCGCTCTTCTaGTGGAGATGCTCGGCTATA +
Preference number: 4 (lower is better)
Translates to: TQLHPLHLASSPEAEGMKSYPLF*WRCSAI
Trigger: TATAGCCGAGCATCTCCACCAGAAGAGCGGATAGGA...CTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGAAGCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp CCAAATGACTTCTGTGCAACAACAGAGCCGAGCCCGGTCCCAGGGGCTGGATGGGTGAGCTCATATAGCTaGAACAAATCTGACATTGTT +
Preference number: 4 (lower is better)
Translates to: PNDFCATTEPSPVPGAGWVSSYS*NKSDIV
Trigger: AACAATGTCAGATTTGTTCCAGCTATATGAGCTCAC...CCATCCAGCCCCTGGGACCGGGCTCGGCTCTGTTGTTGCACAGAAGTCATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp ACCAAAGGAAAAGGTGATCAGAAGGCAACTATACCTGCTAGCACAGTGATGTCAAGACCGCTGGGAAGGTaGCCAGGCACTTCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: TKGKGDQKATIPASTVMSRPLGR*PGTSLL
Trigger: GAGAAGGGAAGTGCCTGGCCACCTTCCCAGCGGTCT...TGACATCACTGTGCTAGCAGGTATAGTTGCCTTCTGATCACCTTTTCCTTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp AGGCTAGTCAAGGTGATGATAGAAATGCCCAATCTTTTACACAGGCACAGGAGTCCAACGAGGTCGCTGTaGTGTAGCGGTGAGAGCGTC +
Preference number: 4 (lower is better)
Translates to: RLVKVMIEMPNLLHRHRSPTRSL*CSGESV
Trigger: GACGCTCTCACCGCTACACCACAGCGACCTCGTTGG...ACTCCTGTGCCTGTGTAAAAGATTGGGCATTTCTATCATCACCTTGACTAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CAA 72 bp AACGTCTGTGGCTGGTTTATTGAATTTGTTCTAGGCTaGTGTCCCCCACCGACCACCTGGCTCATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: NVCGWFIEFVLG*CPPPTTWLISA
Trigger: AGCTGAGATGAGCCAGGTGGTCGGTGGGGGACACAAGCCTAGAACAAATTCAATAAACCAGCCACAGACGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR CAA 72 bp ACTGACGGCAAATTGCTTGTGGGCAGGGTCTGTGCCTaGGTTTACAGGTGTACATCCACACAGCTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: TDGKLLVGRVCA*VYRCTSTQLLA
Trigger: TGCTAAGAGCTGTGTGGATGTACACCTGTAAACCAAGGCACAGACCCTGCCCACAAGCAATTTGCCGTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp TCTGATGATAACGTCTGTGGCTGGTTTATTGAATTTGTTCTAGGCTTGTGTCCCTGGTGTCCCTCCCTCTaGTGGACACCAGCACAGCAC +
Preference number: 4 (lower is better)
Translates to: SDDNVCGWFIEFVLGLCPWCPSL*WTPAQH
Trigger: GTGCTGTGCTGGTGTCCATCAGAGGGAGGGACACCA...GGGACACAAGCCTAGAACAAATTCAATAAACCAGCCACAGACGTTATCATCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR GCA 90 bp CCTATGACAACTGGAAAAGACTTCTTGGTGAATCCTCTGGAGGTGGATAACAGGGATTCAAAAGTCCACTaGGCATCTCGCAGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: PMTTGKDFLVNPLEVDNRDSKVH*ASRRAG
Trigger: GCCCGCTCTGCGAGATGCGCAGTGGACTTTTGAATC...CCTGTTATCCACCTCCAGAGGATTCACCAAGAAGTCTTTTCCAGTTGTCATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366976.3
ENST00000626725.1
CDS-3UTR GCA 90 bp CTGGTTTCCTATGACAACTGGAAAAGACTTCTTGGTGAATCCTCTGGAGGTGGAGATTCAAAAGTCCACTaGGCATCTCGCAGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: LVSYDNWKRLLGESSGGGDSKVH*ASRRAG
Trigger: GCCCGCTCTGCGAGATGCGCAGTGGACTTTTGAATC...TCCACCTCCAGAGGATTCACCAAGAAGTCTTTTCCAGTTGTCATAGGAAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366976.3
ENST00000626725.1
CDS-3UTR GCA 90 bp GTGTCCTCTCAGAGGCCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACTGCTTTTTCAGATTTCCCTaGTGTTTATCAAGATGGCAT +
Preference number: 4 (lower is better)
Translates to: VSSQRPSSPVYSGLGDDCFFRFP*CLSRWH
Trigger: ATGCCATCTTGATAAACAGCAGGGAAATCTGAAAAA...GCAGTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGGCCTCTGAGAGGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR GCA 90 bp CTCTGCAGTCCTCAAATGCAGAGTGATTGGGTCACTCTCCATGGTGTCCATGAGAGGTGGATAACAGGCTaGATCCTGAGAACTTGGGAA +
Preference number: 4 (lower is better)
Translates to: LCSPQMQSDWVTLHGVHERWITG*ILRTWE
Trigger: TTCCCAAGTTCTCAGGATGCAGCCTGTTATCCACCT...CTCATGGACACCATGGAGAGTGACCCAATCACTCTGCATTTGAGGACTGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp TTCCAAACCCATGAGTTTCACTCTCAGGTTCCCTCTAGGAGCAGAAGTGCAGGTCTCTCTCCACATGCATaGACTGAGGAAAGGCCATGT +
Preference number: 4 (lower is better)
Translates to: FQTHEFHSQVPSRSRSAGLSPHA*TEERPC
Trigger: ACATGGCCTTTCCTCAGTGCATGCATGTGGAGAGAG...ACCTGCACTTCTGCTCCTAGAGGGAACCTGAGAGTGAAACTCATGGGTTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp AATGTCCAGACCGCTGAGCCACTCTGCAGTCCTCAAATGCAGAGTGATTGGGTCATGGCTTTCAAGACTTaGCTTGAGACTCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: NVQTAEPLCSPQMQSDWVMAFKT*LETQSC
Trigger: ACAGCTCTGAGTCTCAAGGCAAGTCTTGAAAGCCAT...GACCCAATCACTCTGCATTTGAGGACTGCAGAGTGGCTCAGCGGTCTGGACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp AAACAGTTTTTGGGAGGTAACACTGTCCCTATGGGAAGACTTGGTATTTTTCAGAGGGAGGGCGGGCTCTaGGTCACCCAGCTTCATCCT +
Preference number: 4 (lower is better)
Translates to: KQFLGGNTVPMGRLGIFQREGGL*VTQLHP
Trigger: AGGATGAAGCTGGGTGACCCAGAGCCCGCCCTCCCT...CTGAAAAATACCAAGTCTTCCCATAGGGACAGTGTTACCTCCCAAAAACTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CCA 90 bp CTTTCAAGACTTGCCTTGAGACTCAGAGCTGTTTCACAACCCTTTGTTCCAGGCCCACAATCCTCCATGTaGCACGTGGGGATCTCCAAA +
Preference number: 4 (lower is better)
Translates to: LSRLALRLRAVSQPFVPGPQSSM*HVGISK
Trigger: TTTGGAGATCCCCACGTGCCACATGGAGGATTGTGG...GCCTGGAACAAAGGGTTGTGAAACAGCTCTGAGTCTCAAGGCAAGTCTTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp CCTCTGGAGGTGGATAACAGGCTGCATCCTGAGAACTTGGGAAAATCCCTCTCCGGAAGCAGTCTCTGTTaGTGTGGTTTCTATCTGTGT +
Preference number: 4 (lower is better)
Translates to: PLEVDNRLHPENLGKSLSGSSLC*CGFYLC
Trigger: ACACAGATAGAAACCACACCAACAGAGACTGCTTCC...GGAGAGGGATTTTCCCAAGTTCTCAGGATGCAGCCTGTTATCCACCTCCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366976.3
CDS-3UTR CCA 90 bp CTGGAGGTGGATAACAGGCTGCATCCTGAGAACTTGGGAAAATCCCTCTCCTTGTGTCAGAGGTTTTCCTaGAAGCAGTCTCTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: LEVDNRLHPENLGKSLSLCQRFS*KQSLLV
Trigger: CACCAACAGAGACTGCTTCCAGGAAAACCTCTGACA...CAAGGAGAGGGATTTTCCCAAGTTCTCAGGATGCAGCCTGTTATCCACCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366976.3
CDS-3UTR CCA 90 bp ATCTGCACATCACTTATACCATTTGGTGAGATCTCTGGAGAATGGAACACCTTCGGCACAGGAGTCAGCTaGAGCAGAAGACCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: ICTSLIPFGEISGEWNTFGTGVS*SRRPAG
Trigger: CCCTGCAGGTCTTCTGCTCCAGCTGACTCCTGTGCC...GAAGGTGTTCCATTCTCCAGAGATCTCACCAAATGGTATAAGTGATGTGCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp AATGTCCAGACCGCTGAGCCACTCTGCAGTCCTCAAATGCAGAGTGATTGGGTCCTGTGGCTGGTTTATTaGATTTGTTCTAGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: NVQTAEPLCSPQMQSDWVLWLVY*ICSRLV
Trigger: CACAAGCCTAGAACAAATTCAATAAACCAGCCACAG...GACCCAATCACTCTGCATTTGAGGACTGCAGAGTGGCTCAGCGGTCTGGACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR TCA 90 bp ACTGTCCCTATGGGAAGACTTGGTATTTTTCAGATTTCCCTGCTGTTTATCAAGGGTGGGCGGATCGCTTaGGCTCACGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: TVPMGRLGIFQISLLFIKGGRIA*AHEFET
Trigger: GGTCTCAAACTCGTGAGCTCAAGCGATCCGCCCACC...CTTGATAAACAGCAGGGAAATCTGAAAAATACCAAGTCTTCCCATAGGGACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp CTCTGCAGTCCTCAAATGCAGAGTGATTGGGTCACTCTCCATGGTGTCCATGAGGAAACCCTGAAAAACTaGAACCCCGAGAAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: LCSPQMQSDWVTLHGVHEETLKN*NPEKGS
Trigger: AGAACCTTTCTCGGGGTTTCAGTTTTTCAGGGTTTC...CTCATGGACACCATGGAGAGTGACCCAATCACTCTGCATTTGAGGACTGCAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp AGGGCCTCCACACCCCACCTTACTGCTTTAACCAATGTCCATCTAACTGTTCAGGTATTTATGGACTGGTaGAGAGTTGTGTGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: RASTPHLTALTNVHLTVQVFMDW*RVVWRV
Trigger: CACCCTCCACACAACTCTTCACCAGTCCATAAATAC...CTGAACAGTTAGATGGACATTGGTTAAAGCAGTAAGGTGGGGTGTGGAGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp AAACAGTTTTTGGGAGGTAACACTGTCCCTATGGGAAGACTTGGTATTTTTCAGCAGCCCGCTTCGAGGTaGAGCGCACCCGAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: KQFLGGNTVPMGRLGIFQQPASR*SAPESL
Trigger: AAGACTTTCGGGTGCGCTGCACCTCGAAGCGGGCTG...CTGAAAAATACCAAGTCTTCCCATAGGGACAGTGTTACCTCCCAAAAACTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp AATCCTCTGGAGGTGGATAACAGGCTGCATCCTGAGAACTTGGGAAAATCCCTCAGGTGGATAACAGGCTaGATCCTGAGAACTTGGGAA +
Preference number: 4 (lower is better)
Translates to: NPLEVDNRLHPENLGKSLRWITG*ILRTWE
Trigger: TTCCCAAGTTCTCAGGATGCAGCCTGTTATCCACCT...GAGGGATTTTCCCAAGTTCTCAGGATGCAGCCTGTTATCCACCTCCAGAGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366976.3
ENST00000626725.1
CDS-3UTR GCA 90 bp GTGAATCCTCTGGAGGTGGATAACAGGCTGCATCCTGAGAACTTGGGAAAATCCAGGTGGATAACAGGCTaGATCCTGAGAACTTGGGAA +
Preference number: 4 (lower is better)
Translates to: VNPLEVDNRLHPENLGKSRWITG*ILRTWE
Trigger: TTCCCAAGTTCTCAGGATGCAGCCTGTTATCCACCT...GGATTTTCCCAAGTTCTCAGGATGCAGCCTGTTATCCACCTCCAGAGGATTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366976.3
ENST00000626725.1
CDS-3UTR GCA 90 bp TCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGTTCCCCGATCCCCTTCTCTGGCATTATCATTGTTTaGACACTCATCCTCTTCACT +
Preference number: 4 (lower is better)
Translates to: SCQFTRGRRDEGSPIPFSGIIIV*TLILFT
Trigger: AGTGAAGAGGATGAGTGTGCAAACAATGATAATGCC...AGAGAAGGGGATCGGGGAACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp CCCTCTGATGGACACCAGCACAGCACGGACTTTCCCGTCCTGTCTCTTCATGGTCCTTCCCTGATTATTTaGCTAAAACATTCAAGACTG +
Preference number: 4 (lower is better)
Translates to: PSDGHQHSTDFPVLSLHGPSLII*LKHSRL
Trigger: CAGTCTTGAATGTTTTAGGCAAATAATCAGGGAAGG...ACCATGAAGAGACAGGACGGGAAAGTCCGTGCTGTGCTGGTGTCCATCAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp TCTGACTCGAGGAGGGCCCTCAGCGCAGAGAAAATTAAGTCTAGTGTTTGCAGGCACACCCCACCTTACTaGTTTAACCAATGTCCATCT +
Preference number: 4 (lower is better)
Translates to: SDSRRALSAEKIKSSVCRHTPPY*FNQCPS
Trigger: AGATGGACATTGGTTAAAGCAGTAAGGTGGGGTGTG...CCTGCAAACACTAGACTTAATTTTCTCTGCGCTGAGGGCCCTCCTCGAGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp CGGGCTCTGGGTCACCCAGCTTCATCCTCTTCATCTTGCCAGTTCACCAGAGGCGTCAGCTCTTTATTCTaGTGCACTAAATTATATCCA +
Preference number: 4 (lower is better)
Translates to: RALGHPASSSSSCQFTRGVSSLF*CTKLYP
Trigger: TGGATATAATTTAGTGCAGCAGAATAAAGAGCTGAC...GCCTCTGGTGAACTGGCAAGATGAAGAGGATGAAGCTGGGTGACCCAGAGCCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp AGGCTAGTCAAGGTGATGATAGAAATGCCCAATCTTTTACACAGGCACAGGAGTCACCGTCCCCTTTGTTaGCACATCTCGCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: RLVKVMIEMPNLLHRHRSHRPLC*HISQLL
Trigger: GAGAAGCTGCGAGATGTGGCAACAAAGGGGACGGTG...ACTCCTGTGCCTGTGTAAAAGATTGGGCATTTCTATCATCACCTTGACTAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp GTTGGCTCCTCTTCAATGTCCAGACCGCTGAGCCACTCTGCAGTCCTCAAATGCAGGTGGTTAGCTCTCTaGAAGAAAATGAAAGGATCA +
Preference number: 4 (lower is better)
Translates to: VGSSSMSRPLSHSAVLKCRWLAL*KKMKGS
Trigger: TGATCCTTTCATTTTCTTCCAGAGAGCTAACCACCT...GCATTTGAGGACTGCAGAGTGGCTCAGCGGTCTGGACATTGAAGAGGAGCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CCA 90 bp CTCTGCAGTCCTCAAATGCAGAGTGATTGGGTCACTCTCCATGGTGTCCATGAGTGGTGTCAGAACAGGTaGTTAGCTCTCTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: LCSPQMQSDWVTLHGVHEWCQNR*LALWKK
Trigger: TTTCTTCCAGAGAGCTAACCACCTGTTCTGACACCA...CTCATGGACACCATGGAGAGTGACCCAATCACTCTGCATTTGAGGACTGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CCA 90 bp GAAATGGGCGTGGTAATAGCCCTTAATTCATGGATTGTCTTGAGGATTAAAAGAAGTCTTCTCGGGGAGTaGCGGAGACCAAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: EMGVVIALNSWIVLRIKRSLLGE*RRPRPG
Trigger: GCCAGGCCTTGGTCTCCGCCACTCCCCGAGAAGACT...TCTTTTAATCCTCAAGACAATCCATGAATTAAGGGCTATTACCACGCCCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp ACCCAGCTTCATCCTCTTCATCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGGAAGCAGTCTCTGTTaGTGTGGTTTCTATCTGTGT +
Preference number: 4 (lower is better)
Translates to: TQLHPLHLASSPEAEGMKGSSLC*CGFYLC
Trigger: ACACAGATAGAAACCACACCAACAGAGACTGCTTCC...CTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGAAGCTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp TTCCAAACCCATGAGTTTCACTCTCAGGTTCCCTCTAGGAGCAGAAGTGCAGGTAAGCCACCCAGCCTGTaGTATTCTGTTATAGTAGCC +
Preference number: 4 (lower is better)
Translates to: FQTHEFHSQVPSRSRSAGKPPSL*YSVIVA
Trigger: GGCTACTATAACAGAATACCACAGGCTGGGTGGCTT...ACCTGCACTTCTGCTCCTAGAGGGAACCTGAGAGTGAAACTCATGGGTTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp GGAGGTGGTCATCTACAAGTCGGGAAGACAGCCCTCACCAGAAACTGCATTTGCTCTGCATGCTATCTCTaGAATGGGTATCGATTAGAC +
Preference number: 4 (lower is better)
Translates to: GGGHLQVGKTALTRNCICSACYL*NGYRLD
Trigger: GTCTAATCGATACCCATTCCAGAGATAGCATGCAGA...GCAAATGCAGTTTCTGGTGAGGGCTGTCTTCCCGACTTGTAGATGACCACCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp AGGCTAGTCAAGGTGATGATAGAAATGCCCAATCTTTTACACAGGCACAGGAGTTGTAATCCAGCACTTTaGGAGGCAGAGGTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: RLVKVMIEMPNLLHRHRSCNPAL*EAEVGG
Trigger: TCCGCCCACCTCTGCCTCCCAAAGTGCTGGATTACA...ACTCCTGTGCCTGTGTAAAAGATTGGGCATTTCTATCATCACCTTGACTAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp GTTGGCTCCTCTTCAATGTCCAGACCGCTGAGCCACTCTGCAGTCCTCAAATGCAGTCTCAGGTATTTATaGACTGGTGAAGAGTTGTGT +
Preference number: 4 (lower is better)
Translates to: VGSSSMSRPLSHSAVLKCSLRYL*TGEELC
Trigger: ACACAACTCTTCACCAGTCCATAAATACCTGAGACT...GCATTTGAGGACTGCAGAGTGGCTCAGCGGTCTGGACATTGAAGAGGAGCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp GTGCTCTTAAGATCTCTGACTTTTGATCCGAGTAGGTGTCCAACTGTATGTGTTAGGGGCAGTAAGTCCTaGCACTCAGCACATGGCAGG +
Preference number: 4 (lower is better)
Translates to: VLLRSLTFDPSRCPTVCVRGSKS*HSAHGR
Trigger: CCTGCCATGTGCTGAGTGCCAGGACTTACTGCCCCT...AACACATACAGTTGGACACCTACTCGGATCAAAAGTCAGAGATCTTAAGAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp AAAATGAAAGGATCAGATGTCCCCCATAAACAACTACTCTACTCAGTAGGAAGATCTCCATGGTGTCCATaGGAGGCTGCCAGCCACCTC +
Preference number: 4 (lower is better)
Translates to: KMKGSDVPHKQLLYSVGRSPWCP*EAASHL
Trigger: GAGGTGGCTGGCAGCCTCTCATGGACACCATGGAGA...TCTTCCTACTGAGTAGAGTAGTTGTTTATGGGGGACATCTGATCCTTTCATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR TCA 90 bp ATCCTCTGGAGGTGGATAACAGGCTGCATCCTGAGAACTTGGGAAAATCCCTCTGAAAAGACTTCTTGGTaGATCCTCTGGAGGTGGATA +
Preference number: 4 (lower is better)
Translates to: ILWRWITGCILRTWENPSEKTSW*ILWRWI
Trigger: TATCCACCTCCAGAGGATTCACCAAGAAGTCTTTTC...AGAGGGATTTTCCCAAGTTCTCAGGATGCAGCCTGTTATCCACCTCCAGAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366976.3
ENST00000626725.1
CDS-3UTR TCA 90 bp GTGAATCCTCTGGAGGTGGATAACAGGCTGCATCCTGAGAACTTGGGAAAATCCGAAAAGACTTCTTGGTaGATCCTCTGGAGGTGGATA +
Preference number: 4 (lower is better)
Translates to: VNPLEVDNRLHPENLGKSEKTSW*ILWRWI
Trigger: TATCCACCTCCAGAGGATTCACCAAGAAGTCTTTTC...GGATTTTCCCAAGTTCTCAGGATGCAGCCTGTTATCCACCTCCAGAGGATTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366976.3
ENST00000626725.1
CDS-3UTR TCA 90 bp CAGCTTCATCCTCTTCATCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGTTTTCAAATTTTCCATATaGGGGGCTGGATCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: QLHPLHLASSPEAEGMKVFKFSI*GAGSGS
Trigger: TGACCCTGATCCAGCCCCTCATATGGAAAATTTGAA...AACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGAAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp TCTGACTCGAGGAGGGCCCTCAGCGCAGAGAAAATTAAGTCTAGTGTTTGCAGGACTTCATGGCTTCACTaGTCTCCTTTGCTACTGTTT +
Preference number: 4 (lower is better)
Translates to: SDSRRALSAEKIKSSVCRTSWLH*SPLLLF
Trigger: AAACAGTAGCAAAGGAGATCAGTGAAGCCATGAAGT...CCTGCAAACACTAGACTTAATTTTCTCTGCGCTGAGGGCCCTCCTCGAGTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp TCAATGTCCAGACCGCTGAGCCACTCTGCAGTCCTCAAATGCAGAGTGATTGGGATTTTTAATGCCCACTaGTGGGCTTTGTGTCAATAC +
Preference number: 4 (lower is better)
Translates to: SMSRPLSHSAVLKCRVIGIFNAH*WALCQY
Trigger: GTATTGACACAAAGCCCATCAGTGGGCATTAAAAAT...CCCAATCACTCTGCATTTGAGGACTGCAGAGTGGCTCAGCGGTCTGGACATTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp ACCCAGCTTCATCCTCTTCATCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGTCCCAGCCCTCCCACTaGATTTTTATTTCAACTTTC +
Preference number: 4 (lower is better)
Translates to: TQLHPLHLASSPEAEGMKSQPSH*IFISTF
Trigger: GAAAGTTGAAATAAAAATTCAGTGGGAGGGCTGGGA...CTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGAAGCTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp GTGCTCTTAAGATCTCTGACTTTTGATCCGAGTAGGTGTCCAACTGTATGTGTTTTTTTCCTCTCACTCTaGCTCGAGGAGGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: VLLRSLTFDPSRCPTVCVFFLSL*LEEGPQ
Trigger: CTGAGGGCCCTCCTCGAGTCAGAGTGAGAGGAAAAA...AACACATACAGTTGGACACCTACTCGGATCAAAAGTCAGAGATCTTAAGAGCAC
48% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp GAGCCACTCTGCAGTCCTCAAATGCAGAGTGATTGGGTCACTCTCCATGGTGTCACTACCAAGAGTAGATaGATTGTGAGCTCATATAGC +
Preference number: 4 (lower is better)
Translates to: EPLCSPQMQSDWVTLHGVTTKSR*IVSSYS
Trigger: GCTATATGAGCTCACAATTCATCTACTCTTGGTAGT...GACACCATGGAGAGTGACCCAATCACTCTGCATTTGAGGACTGCAGAGTGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp TTCCAAACCCATGAGTTTCACTCTCAGGTTCCCTCTAGGAGCAGAAGTGCAGGTGGAGAGAAAGGACAATaGATTAGACGTGTGCCACAT +
Preference number: 4 (lower is better)
Translates to: FQTHEFHSQVPSRSRSAGGEKGQ*IRRVPH
Trigger: ATGTGGCACACGTCTAATTCATTGTCCTTTCTCTCC...ACCTGCACTTCTGCTCCTAGAGGGAACCTGAGAGTGAAACTCATGGGTTTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp AGGCTAGTCAAGGTGATGATAGAAATGCCCAATCTTTTACACAGGCACAGGAGTACCGCTGAGCCACTCTaGAGTCCTCAAATGCAGAGT +
Preference number: 4 (lower is better)
Translates to: RLVKVMIEMPNLLHRHRSTAEPL*SPQMQS
Trigger: ACTCTGCATTTGAGGACTGCAGAGTGGCTCAGCGGT...ACTCCTGTGCCTGTGTAAAAGATTGGGCATTTCTATCATCACCTTGACTAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp TTCCAAACCCATGAGTTTCACTCTCAGGTTCCCTCTAGGAGCAGAAGTGCAGGTTATTCCAACCTGGTCTaGCTAGTCTCCAAATCTGCT +
Preference number: 4 (lower is better)
Translates to: FQTHEFHSQVPSRSRSAGYSNLV*LVSKSA
Trigger: AGCAGATTTGGAGACTAGGCAGACCAGGTTGGAATA...ACCTGCACTTCTGCTCCTAGAGGGAACCTGAGAGTGAAACTCATGGGTTTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp CAGCTTCATCCTCTTCATCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGTTCTGGAGCAGAAGACCTaGAGGGAGAAGTTGAATTTT +
Preference number: 4 (lower is better)
Translates to: QLHPLHLASSPEAEGMKVLEQKT*REKLNF
Trigger: AAAATTCAACTTCTCCCTGCAGGTCTTCTGCTCCAG...AACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp GTTGGCTCCTCTTCAATGTCCAGACCGCTGAGCCACTCTGCAGTCCTCAAATGCGACAAAATCATTTCTTaGAAGCAGGTAATTCCACAG +
Preference number: 4 (lower is better)
Translates to: VGSSSMSRPLSHSAVLKCDKIIS*KQVIPQ
Trigger: CTGTGGAATTACCTGCTTGCAAGAAATGATTTTGTC...GCATTTGAGGACTGCAGAGTGGCTCAGCGGTCTGGACATTGAAGAGGAGCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp ACCAAAGGAAAAGGTGATCAGAAGGCAACTATACCTGCTAGCACAGTGATGTCATCTGGACAAGGCCTTTaGTGTGAACCACGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: TKGKGDQKATIPASTVMSSGQGL*CEPRGE
Trigger: TTCTCCCCGTGGTTCACAGCAAAGGCCTTGTCCAGA...TGACATCACTGTGCTAGCAGGTATAGTTGCCTTCTGATCACCTTTTCCTTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp ATTTGTTCTAGGCTTGTGTCCCCCACCGACCACCTGGCTCATCTCAGCTCCCAGGATAACGTCTGTGGCTaGTTTATTGAATTTGTTCTA +
Preference number: 4 (lower is better)
Translates to: ICSRLVSPTDHLAHLSSQDNVCG*FIEFVL
Trigger: TAGAACAAATTCAATAAACCAGCCACAGACGTTATC...CTGGGAGCTGAGATGAGCCAGGTGGTCGGTGGGGGACACAAGCCTAGAACAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CCA 90 bp TCATCCTCTTCATCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGTTCCCCGCCCTATGGGAAGACTTaGTATTTTTCAGATTTCCCT +
Preference number: 4 (lower is better)
Translates to: SSSSSCQFTRGRRDEGSPPYGKT*YFSDFP
Trigger: AGGGAAATCTGAAAAATACCAAGTCTTCCCATAGGG...CGGGGAACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CCA 90 bp AATGTCCAGACCGCTGAGCCACTCTGCAGTCCTCAAATGCAGAGTGATTGGGTCAGGTGGTTAGCTCTCTaGAAGAAAATGAAAGGATCA +
Preference number: 4 (lower is better)
Translates to: NVQTAEPLCSPQMQSDWVRWLAL*KKMKGS
Trigger: TGATCCTTTCATTTTCTTCCAGAGAGCTAACCACCT...GACCCAATCACTCTGCATTTGAGGACTGCAGAGTGGCTCAGCGGTCTGGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CCA 90 bp TCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGTTCCCCGATCCCCTTCTCTGTTTCCTATGACAACTaGAAAAGACTTCTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: SCQFTRGRRDEGSPIPFSVSYDN*KRLLGE
Trigger: TTCACCAAGAAGTCTTTTCCAGTTGTCATAGGAAAC...AGAGAAGGGGATCGGGGAACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp ATATACAGCCATGTGAGCACCACTCAGATCAAGATACAGAACATTTTGCTCACCCTCATTTCAGCCTCCTaGGTGGCTGGGACTACAGGT +
Preference number: 4 (lower is better)
Translates to: IYSHVSTTQIKIQNILLTLISAS*VAGTTG
Trigger: ACCTGTAGTCCCAGCCACCCAGGAGGCTGAAATGAG...GGTGAGCAAAATGTTCTGTATCTTGATCTGAGTGGTGCTCACATGGCTGTATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp TTCCAAACCCATGAGTTTCACTCTCAGGTTCCCTCTAGGAGCAGAAGTGCAGGTTGTGGGCTTGTGTTATaGACTCAATGTTTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: FQTHEFHSQVPSRSRSAGCGLVL*TQCLCP
Trigger: GGGACACAAACATTGAGTCCATAACACAAGCCCACA...ACCTGCACTTCTGCTCCTAGAGGGAACCTGAGAGTGAAACTCATGGGTTTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp TTGGTGAGATCTCTGGAGAATGGAACACCTTCACAGACAACATCAGGGATAAACAGTTGTTGGTCAGGCTaGTCTCCAATTCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LVRSLENGTPSQTTSGINSCWSG*SPIPSL
Trigger: GAGGCTGGGAATTGGAGACCAGCCTGACCAACAACT...GTTTATCCCTGATGTTGTCTGTGAAGGTGTTCCATTCTCCAGAGATCTCACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp AATGTCCAGACCGCTGAGCCACTCTGCAGTCCTCAAATGCAGAGTGATTGGGTCAAGAACCCCCTTCAGTaGTTCTCTAGAGAGATATTT +
Preference number: 4 (lower is better)
Translates to: NVQTAEPLCSPQMQSDWVKNPLQ*FSREIF
Trigger: AAATATCTCTCTAGAGAACCACTGAAGGGGGTTCTT...GACCCAATCACTCTGCATTTGAGGACTGCAGAGTGGCTCAGCGGTCTGGACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp ATATACAGCCATGTGAGCACCACTCAGATCAAGATACAGAACATTTTGCTCACCGTAATCACAGCACTTTaGGAGGCCAGGGCGAGTGGA +
Preference number: 4 (lower is better)
Translates to: IYSHVSTTQIKIQNILLTVITAL*EARASG
Trigger: TCCACTCGCCCTGGCCTCCCAAAGTGCTGTGATTAC...GGTGAGCAAAATGTTCTGTATCTTGATCTGAGTGGTGCTCACATGGCTGTATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp TTCAGTACCATGTCAGAGGTTTTCCTGGAAGCAGTCTCTGTTGGTGTGGTTTCTATTCTCTTGCACAGCTaGTTCAAAAGTCCACTGCGC +
Preference number: 4 (lower is better)
Translates to: FSTMSEVFLEAVSVGVVSILLHS*FKSPLR
Trigger: GCGCAGTGGACTTTTGAATCAGCTGTGCAAGAGAAT...AGAAACCACACCAACAGAGACTGCTTCCAGGAAAACCTCTGACATGGTACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366976.3
CDS-3UTR TCA 90 bp CCTATGACAACTGGAAAAGACTTCTTGGTGAATCCTCTGGAGGTGGATAACAGGATTCTCTTGCACAGCTaGTTCAAAAGTCCACTGCGC +
Preference number: 4 (lower is better)
Translates to: PMTTGKDFLVNPLEVDNRILLHS*FKSPLR
Trigger: GCGCAGTGGACTTTTGAATCAGCTGTGCAAGAGAAT...CCTGTTATCCACCTCCAGAGGATTCACCAAGAAGTCTTTTCCAGTTGTCATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366976.3
ENST00000626725.1
CDS-3UTR TCA 90 bp GTGCTCTTAAGATCTCTGACTTTTGATCCGAGTAGGTGTCCAACTGTATGTGTTTCTCTTCATGGTGGGTaGAGAGCACAGGGAGAGTGT +
Preference number: 4 (lower is better)
Translates to: VLLRSLTFDPSRCPTVCVSLHGG*RAQGEC
Trigger: ACACTCTCCCTGTGCTCTTCACCCACCATGAAGAGA...AACACATACAGTTGGACACCTACTCGGATCAAAAGTCAGAGATCTTAAGAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp ATCCTCTGGAGGTGGATAACAGGCTGCATCCTGAGAACTTGGGAAAATCCCTCTACTTCATGGCTTCACTaGTCTCCTTTGCTACTGTTT +
Preference number: 4 (lower is better)
Translates to: ILWRWITGCILRTWENPSTSWLH*SPLLLF
Trigger: AAACAGTAGCAAAGGAGATCAGTGAAGCCATGAAGT...AGAGGGATTTTCCCAAGTTCTCAGGATGCAGCCTGTTATCCACCTCCAGAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626725.1
CDS-3UTR TCA 90 bp GTAACACTGTCCCTATGGGAAGACTTGGTATTTTTCAGATTTCCCTGCTGTTTACCTCCAGGGCTCAAGTaGTCCTCTCATTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: VTLSLWEDLVFFRFPCCLPPGLK*SSHFSL
Trigger: GAGGCTGAAATGAGAGGATCACTTGAGCCCTGGAGG...TAAACAGCAGGGAAATCTGAAAAATACCAAGTCTTCCCATAGGGACAGTGTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp AGGCTAGTCAAGGTGATGATAGAAATGCCCAATCTTTTACACAGGCACAGGAGTACTGGAGCCATTCTCTaGGTAAGGCTAGTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: RLVKVMIEMPNLLHRHRSTGAIL*VRLVKV
Trigger: CACCTTGACTAGCCTTACTCAGAGAATGGCTCCAGT...ACTCCTGTGCCTGTGTAAAAGATTGGGCATTTCTATCATCACCTTGACTAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp ACTGTCCCTATGGGAAGACTTGGTATTTTTCAGATTTCCCTGCTGTTTATCAAGGGCATGAGAACCTCTTaGACCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: TVPMGRLGIFQISLLFIKGMRTS*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGAGGTTCTCATGCC...CTTGATAAACAGCAGGGAAATCTGAAAAATACCAAGTCTTCCCATAGGGACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp TCATCCTCTTCATCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGTTCCCCGACAACAGGGTGGTACTaGTTCAGAATTTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: SSSSSCQFTRGRRDEGSPTTGWY*FRISCF
Trigger: AAAACAAGAAATTCTGAAGCAGTACCACCCTGTTGT...CGGGGAACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR GCA 90 bp CCTCTGGAGGTGGATAACAGGCTGCATCCTGAGAACTTGGGAAAATCCCTCTCCACAACAGGGTGGTACTaGTTCAGAATTTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: PLEVDNRLHPENLGKSLSTTGWY*FRISCF
Trigger: AAAACAAGAAATTCTGAAGCAGTACCACCCTGTTGT...GGAGAGGGATTTTCCCAAGTTCTCAGGATGCAGCCTGTTATCCACCTCCAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366976.3
ENST00000626725.1
CDS-3UTR GCA 90 bp TTCCAAACCCATGAGTTTCACTCTCAGGTTCCCTCTAGGAGCAGAAGTGCAGGTCTAGTTCTTGGCCTATaGAGAAATGCAACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: FQTHEFHSQVPSRSRSAGLVLGL*RNATSP
Trigger: AGGAGAAGTTGCATTTCTGCATAGGCCAAGAACTAG...ACCTGCACTTCTGCTCCTAGAGGGAACCTGAGAGTGAAACTCATGGGTTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp ACTGTCCCTATGGGAAGACTTGGTATTTTTCAGATTTCCCTGCTGTTTATCAAGCTGGGAGGTGGAGGTTaGAGTGAGTTGAGATCGCTC +
Preference number: 4 (lower is better)
Translates to: TVPMGRLGIFQISLLFIKLGGGG*SELRSL
Trigger: GAGCGATCTCAACTCACTGCAACCTCCACCTCCCAG...CTTGATAAACAGCAGGGAAATCTGAAAAATACCAAGTCTTCCCATAGGGACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp CTCAGGTTTAGCATCTGGTTTCCTATGACAACTGGAAAAGACTTCTTGGTGAATGAGCTCCTTGTCCCATaGAGGGTCAAGGACCACCAA +
Preference number: 4 (lower is better)
Translates to: LRFSIWFPMTTGKDFLVNELLVP*RVKDHQ
Trigger: TTGGTGGTCCTTGACCCTCCATGGGACAAGGAGCTC...ATTCACCAAGAAGTCTTTTCCAGTTGTCATAGGAAACCAGATGCTAAACCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366976.3
CDS-3UTR CCA 90 bp ACTGTCCCTATGGGAAGACTTGGTATTTTTCAGATTTCCCTGCTGTTTATCAAGGAGCTCCTTGTCCCATaGAGGGTCAAGGACCACCAA +
Preference number: 4 (lower is better)
Translates to: TVPMGRLGIFQISLLFIKELLVP*RVKDHQ
Trigger: TTGGTGGTCCTTGACCCTCCATGGGACAAGGAGCTC...CTTGATAAACAGCAGGGAAATCTGAAAAATACCAAGTCTTCCCATAGGGACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp CTTTCAAGACTTGCCTTGAGACTCAGAGCTGTTTCACAACCCTTTGTTCCAGGCTGCATCCTGAGAACTTaGGAAAATCCCTCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: LSRLALRLRAVSQPFVPGCILRT*ENPSPC
Trigger: ACAAGGAGAGGGATTTTCCCAAGTTCTCAGGATGCA...GCCTGGAACAAAGGGTTGTGAAACAGCTCTGAGTCTCAAGGCAAGTCTTGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp GAAATGGGCGTGGTAATAGCCCTTAATTCATGGATTGTCTTGAGGATTAAAAGATTTGGGAGGCAGAGGTaGGCGGATCGCTTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: EMGVVIALNSWIVLRIKRFGRQR*ADRLSS
Trigger: TGAGCTCAAGCGATCCGCCCACCTCTGCCTCCCAAA...TCTTTTAATCCTCAAGACAATCCATGAATTAAGGGCTATTACCACGCCCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp ATCTGCACATCACTTATACCATTTGGTGAGATCTCTGGAGAATGGAACACCTTCGCATTCCCATCAAGGTaGCATCAGGGGCAGAAATGG +
Preference number: 4 (lower is better)
Translates to: ICTSLIPFGEISGEWNTFAFPSR*HQGQKW
Trigger: CCATTTCTGCCCCTGATGCCACCTTGATGGGAATGC...GAAGGTGTTCCATTCTCCAGAGATCTCACCAAATGGTATAAGTGATGTGCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp AAACAGTTTTTGGGAGGTAACACTGTCCCTATGGGAAGACTTGGTATTTTTCAGACGGCAAATTGCTTGTaGGCAGGGTCTGTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: KQFLGGNTVPMGRLGIFQTANCL*AGSVPW
Trigger: CCAAGGCACAGACCCTGCCCACAAGCAATTTGCCGT...CTGAAAAATACCAAGTCTTCCCATAGGGACAGTGTTACCTCCCAAAAACTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CAA 72 bp ACAGTCACACTGTTACAAACATATGGATTGTACTGGTaGGCACAGAAGCCTCCTCACTATCCCTGCCACTCT +
Preference number: 4 (lower is better)
Translates to: TVTLLQTYGLYW*AQKPPHYPCHS
Trigger: AGAGTGGCAGGGATAGTGAGGAGGCTTCTGTGCCAACCAGTACAATCCATATGTTTGTAACAGTGTGACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CAA 72 bp GGTGTTCAGACAGTCACACTGTTACAAACATATGGATaGTACTGGTTGGCACAGAAGCCTCCTCACTATCCC +
Preference number: 4 (lower is better)
Translates to: GVQTVTLLQTYG*YWLAQKPPHYP
Trigger: GGGATAGTGAGGAGGCTTCTGTGCCAACCAGTACAATCCATATGTTTGTAACAGTGTGACTGTCTGAACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp CAGCTTCATCCTCTTCATCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGTTCTTGCCCAATGTCACTaGACTAATAATGGTAGAACT +
Preference number: 4 (lower is better)
Translates to: QLHPLHLASSPEAEGMKVLAQCH*TNNGRT
Trigger: AGTTCTACCATTATTAGTTCAGTGACATTGGGCAAG...AACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGAAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp GTAACACTGTCCCTATGGGAAGACTTGGTATTTTTCAGATTTCCCTGCTGTTTAGAGGTTGCAGTGAGTTaGGATCGCTCCACTACACTC +
Preference number: 4 (lower is better)
Translates to: VTLSLWEDLVFFRFPCCLEVAVS*DRSTTL
Trigger: GAGTGTAGTGGAGCGATCTCAACTCACTGCAACCTC...TAAACAGCAGGGAAATCTGAAAAATACCAAGTCTTCCCATAGGGACAGTGTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp AGGGCCTCCACACCCCACCTTACTGCTTTAACCAATGTCCATCTAACTGTTCAGACTTATACCATTTGGTaGGATCTCTGGAGAATGGAA +
Preference number: 4 (lower is better)
Translates to: RASTPHLTALTNVHLTVQTYTIW*DLWRME
Trigger: TTCCATTCTCCAGAGATCTCACCAAATGGTATAAGT...CTGAACAGTTAGATGGACATTGGTTAAAGCAGTAAGGTGGGGTGTGGAGGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp ACCCAGCTTCATCCTCTTCATCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGCTCTCAAAAACTTTATaGCTCAGTTGTCTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: TQLHPLHLASSPEAEGMKLSKTL*LSCLEV
Trigger: AACTTCCAGACAACTGAGTCATAAAGTTTTTGAGAG...CTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGAAGCTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp CTCTGCAGTCCTCAAATGCAGAGTGATTGGGTCACTCTCCATGGTGTCCATGAGTGTGTTAAATGGGGGTaGATGGAATTTAGAAGATCT +
Preference number: 4 (lower is better)
Translates to: LCSPQMQSDWVTLHGVHECVKWG*MEFRRS
Trigger: AGATCTTCTAAATTCCATTCACCCCCATTTAACACA...CTCATGGACACCATGGAGAGTGACCCAATCACTCTGCATTTGAGGACTGCAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp ACCATGTCAGAGGTTTTCCTGGAAGCAGTCTCTGTTGGTGTGGTTTCTATCTGTGCTTCCTGCCATGCTTaGCCATTAATGCTGATATTC +
Preference number: 4 (lower is better)
Translates to: TMSEVFLEAVSVGVVSICASCHA*PLMLIF
Trigger: GAATATCAGCATTAATGGGCAAGCATGGCAGGAAGC...ACAGATAGAAACCACACCAACAGAGACTGCTTCCAGGAAAACCTCTGACATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366976.3
CDS-3UTR GCA 90 bp AGGTGGATAACAGGCTGCATCCTGAGAACTTGGGAAAATCCCTCTCCTTGTTCATTATCTGAAGCTTCCTaGCATGCTTGCCCATTAATG +
Preference number: 4 (lower is better)
Translates to: RWITGCILRTWENPSPCSLSEAS*HACPLM
Trigger: CATTAATGGGCAAGCATGGCAGGAAGCTTCAGATAA...TGAACAAGGAGAGGGATTTTCCCAAGTTCTCAGGATGCAGCCTGTTATCCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626725.1
CDS-3UTR GCA 90 bp GAGCCACTCTGCAGTCCTCAAATGCAGAGTGATTGGGTCACTCTCCATGGTGTCGGGCCATATGGTAACTaGATTATCTCTTTGATAATT +
Preference number: 4 (lower is better)
Translates to: EPLCSPQMQSDWVTLHGVGPYGN*IISLII
Trigger: AATTATCAAAGAGATAATGCAGTTACCATATGGCCC...GACACCATGGAGAGTGACCCAATCACTCTGCATTTGAGGACTGCAGAGTGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp TCATCCTCTTCATCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGTTCCCCGAATGAATTAGACGTGTaGCACATACTTCTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: SSSSSCQFTRGRRDEGSPNELDV*HILLSK
Trigger: TTTTGAGAGAAGTATGTGGCACACGTCTAATTCATT...CGGGGAACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp AAACAGTTTTTGGGAGGTAACACTGTCCCTATGGGAAGACTTGGTATTTTTCAGCCTCCATGTGGCACGTaGGGATCTCCAAATGACTTC +
Preference number: 4 (lower is better)
Translates to: KQFLGGNTVPMGRLGIFQPPCGT*GSPNDF
Trigger: GAAGTCATTTGGAGATCCCCACGTGCCACATGGAGG...CTGAAAAATACCAAGTCTTCCCATAGGGACAGTGTTACCTCCCAAAAACTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CCA 90 bp CAGCTTCATCCTCTTCATCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGTTCCCTATGGGAAGACTTaGTATTTTTCAGATTTCCCT +
Preference number: 4 (lower is better)
Translates to: QLHPLHLASSPEAEGMKVPYGKT*YFSDFP
Trigger: AGGGAAATCTGAAAAATACCAAGTCTTCCCATAGGG...AACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGAAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CCA 90 bp CTGGTTTCCTATGACAACTGGAAAAGACTTCTTGGTGAATCCTCTGGAGGTGGATGCATCCTGAGAACTTaGGAAAATCCCTCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: LVSYDNWKRLLGESSGGGCILRT*ENPSPC
Trigger: ACAAGGAGAGGGATTTTCCCAAGTTCTCAGGATGCA...TCCACCTCCAGAGGATTCACCAAGAAGTCTTTTCCAGTTGTCATAGGAAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366976.3
ENST00000626725.1
CDS-3UTR CCA 90 bp TTCCAAACCCATGAGTTTCACTCTCAGGTTCCCTCTAGGAGCAGAAGTGCAGGTGAGGCTTCTTTCACTTaGCATGTTTTAAGGTTCATC +
Preference number: 4 (lower is better)
Translates to: FQTHEFHSQVPSRSRSAGEASFT*HVLRFI
Trigger: GATGAACCTTAAAACATGCCAAGTGAAAGAAGCCTC...ACCTGCACTTCTGCTCCTAGAGGGAACCTGAGAGTGAAACTCATGGGTTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp ACCAAAGGAAAAGGTGATCAGAAGGCAACTATACCTGCTAGCACAGTGATGTCAACAGAGCTACATGAATaGGCACCAAGGGAGGTCTTA +
Preference number: 4 (lower is better)
Translates to: TKGKGDQKATIPASTVMSTELHE*APREVL
Trigger: TAAGACCTCCCTTGGTGCCCATTCATGTAGCTCTGT...TGACATCACTGTGCTAGCAGGTATAGTTGCCTTCTGATCACCTTTTCCTTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CAA 72 bp CATGTGAGCACCACTCAGATCAAGATACAGAACATTTaGCTCACCCAAAAATGTTTCCCGTGCCATTCCCAG +
Preference number: 4 (lower is better)
Translates to: HVSTTQIKIQNI*LTQKCFPCHSQ
Trigger: CTGGGAATGGCACGGGAAACATTTTTGGGTGAGCAAAATGTTCTGTATCTTGATCTGAGTGGTGCTCACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CAA 72 bp GGAACCACAGGCTTATCTGCACATCACTTATACCATTaGGTGAGATCTCTGGAGAATGGAACACCTTCACAG +
Preference number: 4 (lower is better)
Translates to: GTTGLSAHHLYH*VRSLENGTPSQ
Trigger: CTGTGAAGGTGTTCCATTCTCCAGAGATCTCACCAAATGGTATAAGTGATGTGCAGATAAGCCTGTGGTTCC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp AGGGCCTCCACACCCCACCTTACTGCTTTAACCAATGTCCATCTAACTGTTCAGAAGGCCTTCACATTATaGACTCATTTACTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: RASTPHLTALTNVHLTVQKAFTL*THLLLR
Trigger: TCTGAGAAGTAAATGAGTTCATAATGTGAAGGCCTT...CTGAACAGTTAGATGGACATTGGTTAAAGCAGTAAGGTGGGGTGTGGAGGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp TTCCAAACCCATGAGTTTCACTCTCAGGTTCCCTCTAGGAGCAGAAGTGCAGGTATTCATGGATTGTCTTaGGGATTAAAAGAGATGGTG +
Preference number: 4 (lower is better)
Translates to: FQTHEFHSQVPSRSRSAGIHGLS*GLKEMV
Trigger: CACCATCTCTTTTAATCCTCAAGACAATCCATGAAT...ACCTGCACTTCTGCTCCTAGAGGGAACCTGAGAGTGAAACTCATGGGTTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp AGGCTAGTCAAGGTGATGATAGAAATGCCCAATCTTTTACACAGGCACAGGAGTGCTTCCTGCCATGCTTaGCCATTAATGCTGATATTC +
Preference number: 4 (lower is better)
Translates to: RLVKVMIEMPNLLHRHRSASCHA*PLMLIF
Trigger: GAATATCAGCATTAATGGGCAAGCATGGCAGGAAGC...ACTCCTGTGCCTGTGTAAAAGATTGGGCATTTCTATCATCACCTTGACTAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp ACTTGGGAAAATCCCTCTCCTTGTTCAATTAATGCAGGCAAGGACTTCATGGCTGCTTCCTGCCATGCTTaGCCATTAATGCTGATATTC +
Preference number: 4 (lower is better)
Translates to: TWENPSPCSINAGKDFMAASCHA*PLMLIF
Trigger: GAATATCAGCATTAATGGGCAAGCATGGCAGGAAGC...AGCCATGAAGTCCTTGCCTGCATTAATTGAACAAGGAGAGGGATTTTCCCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626725.1
CDS-3UTR GCA 90 bp ATCCTCTGGAGGTGGATAACAGGCTGCATCCTGAGAACTTGGGAAAATCCCTCTACAACAGGGTGGTACTaGTTCAGAATTTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: ILWRWITGCILRTWENPSTTGWY*FRISCF
Trigger: AAAACAAGAAATTCTGAAGCAGTACCACCCTGTTGT...AGAGGGATTTTCCCAAGTTCTCAGGATGCAGCCTGTTATCCACCTCCAGAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366976.3
ENST00000626725.1
CDS-3UTR GCA 90 bp CTTTCAAGACTTGCCTTGAGACTCAGAGCTGTTTCACAACCCTTTGTTCCAGGCGGGCAGTCTTTAGTTTaGTTTCTTTTCAGTACCATG +
Preference number: 4 (lower is better)
Translates to: LSRLALRLRAVSQPFVPGGQSLV*FLFSTM
Trigger: CATGGTACTGAAAAGAAAGCAAACTAAAGACTGCCC...GCCTGGAACAAAGGGTTGTGAAACAGCTCTGAGTCTCAAGGCAAGTCTTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp CCTATGACAACTGGAAAAGACTTCTTGGTGAATCCTCTGGAGGTGGATAACAGGGGATGTACAACAGGGTaGTACTGCTTCAGAATTTCT +
Preference number: 4 (lower is better)
Translates to: PMTTGKDFLVNPLEVDNRGCTTG*YCFRIS
Trigger: AGAAATTCTGAAGCAGTACCACCCTGTTGTACATCC...CCTGTTATCCACCTCCAGAGGATTCACCAAGAAGTCTTTTCCAGTTGTCATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366976.3
ENST00000626725.1
CDS-3UTR CCA 90 bp TTGGTGAGATCTCTGGAGAATGGAACACCTTCACAGACAACATCAGGGATAAACAGCCTCTCACATCAGTaGGGGAAAAGAGGTACTATT +
Preference number: 4 (lower is better)
Translates to: LVRSLENGTPSQTTSGINSLSHQ*GKRGTI
Trigger: AATAGTACCTCTTTTCCCCCACTGATGTGAGAGGCT...GTTTATCCCTGATGTTGTCTGTGAAGGTGTTCCATTCTCCAGAGATCTCACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp AAGAAAATGAAAGGATCAGATGTCCCCCATAAACAACTACTCTACTCAGTAGGAATAGTCCCACCTACTTaGGAGGCTAAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: KKMKGSDVPHKQLLYSVGIVPPT*EAKVGG
Trigger: TCCTCCCACCTTAGCCTCCCAAGTAGGTGGGACTAT...TCCTACTGAGTAGAGTAGTTGTTTATGGGGGACATCTGATCCTTTCATTTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp ACCAAAGGAAAAGGTGATCAGAAGGCAACTATACCTGCTAGCACAGTGATGTCACATTCCAATTCCTCTTaGTATTCCTCAGGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: TKGKGDQKATIPASTVMSHSNSS*YSSGLG
Trigger: TCCCAGACCTGAGGAATACCAAGAGGAATTGGAATG...TGACATCACTGTGCTAGCAGGTATAGTTGCCTTCTGATCACCTTTTCCTTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp ATATACAGCCATGTGAGCACCACTCAGATCAAGATACAGAACATTTTGCTCACCCTGCCATGTCAAAGCTaGTGTTCAGACAGTCACACT +
Preference number: 4 (lower is better)
Translates to: IYSHVSTTQIKIQNILLTLPCQS*CSDSHT
Trigger: AGTGTGACTGTCTGAACACCAGCTTTGACATGGCAG...GGTGAGCAAAATGTTCTGTATCTTGATCTGAGTGGTGCTCACATGGCTGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp GTGCTCTTAAGATCTCTGACTTTTGATCCGAGTAGGTGTCCAACTGTATGTGTTGTAGACAGGAGACTCTaGAGTCCTAATTCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: VLLRSLTFDPSRCPTVCVVDRRL*SPNSGQ
Trigger: CTGACCTGAATTAGGACTCCAGAGTCTCCTGTCTAC...AACACATACAGTTGGACACCTACTCGGATCAAAAGTCAGAGATCTTAAGAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp AAAATGAAAGGATCAGATGTCCCCCATAAACAACTACTCTACTCAGTAGGAAGAACCACGGGGAGAAGGTaGAAGCAGAGTTTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: KMKGSDVPHKQLLYSVGRTTGRR*KQSLWS
Trigger: TGACCACAAACTCTGCTTCCACCTTCTCCCCGTGGT...TCTTCCTACTGAGTAGAGTAGTTGTTTATGGGGGACATCTGATCCTTTCATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CAA 72 bp GAACAAAGATTCCTGCCATTAAGGGACTTACAGTTTTaGGGTCTGTCTTTGATGCTGGAGACGCTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: EQRFLPLRDLQF*GLSLMLETLLK
Trigger: TTTGAGGAGCGTCTCCAGCATCAAAGACAGACCCAAAAACTGTAAGTCCCTTAATGGCAGGAATCTTTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp ATATACAGCCATGTGAGCACCACTCAGATCAAGATACAGAACATTTTGCTCACCGACCAAAGGAAAAGGTaGTCAGAAGGCAACTATACC +
Preference number: 4 (lower is better)
Translates to: IYSHVSTTQIKIQNILLTDQRKR*SEGNYT
Trigger: GGTATAGTTGCCTTCTGATCACCTTTTCCTTTGGTC...GGTGAGCAAAATGTTCTGTATCTTGATCTGAGTGGTGCTCACATGGCTGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp ACTGTCCCTATGGGAAGACTTGGTATTTTTCAGATTTCCCTGCTGTTTATCAAGTCTGCAGTCCTCAAATaGAGAGTGATTGGGTCACTC +
Preference number: 4 (lower is better)
Translates to: TVPMGRLGIFQISLLFIKSAVLK*RVIGSL
Trigger: GAGTGACCCAATCACTCTGCATTTGAGGACTGCAGA...CTTGATAAACAGCAGGGAAATCTGAAAAATACCAAGTCTTCCCATAGGGACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR GCA 90 bp AGGCTAGTCAAGGTGATGATAGAAATGCCCAATCTTTTACACAGGCACAGGAGTTCTGCTCTTATGTCCTaGAGGGATATGGGAATTAGA +
Preference number: 4 (lower is better)
Translates to: RLVKVMIEMPNLLHRHRSSALMS*RDMGIR
Trigger: TCTAATTCCCATATCCCTGCAGGACATAAGAGCAGA...ACTCCTGTGCCTGTGTAAAAGATTGGGCATTTCTATCATCACCTTGACTAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp AAGAAAATGAAAGGATCAGATGTCCCCCATAAACAACTACTCTACTCAGTAGGACAGAAGGCCTCGCTCTaGTCTACATGGTCTATAGAC +
Preference number: 4 (lower is better)
Translates to: KKMKGSDVPHKQLLYSVGQKASL*STWSID
Trigger: GTCTATAGACCATGTAGAGCAGAGCGAGGCCTTCTG...TCCTACTGAGTAGAGTAGTTGTTTATGGGGGACATCTGATCCTTTCATTTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp ACTGTCCCTATGGGAAGACTTGGTATTTTTCAGATTTCCCTGCTGTTTATCAAGTGTCCACCTTGTCTCTaGGCACATCTGATGATAACG +
Preference number: 4 (lower is better)
Translates to: TVPMGRLGIFQISLLFIKCPPCL*AHLMIT
Trigger: CGTTATCATCAGATGTGCCCAGAGACAAGGTGGACA...CTTGATAAACAGCAGGGAAATCTGAAAAATACCAAGTCTTCCCATAGGGACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CCA 90 bp TCTGATGATAACGTCTGTGGCTGGTTTATTGAATTTGTTCTAGGCTTGTGTCCCTGGTGTCAGAACAGGTaGTTAGCTCTCTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: SDDNVCGWFIEFVLGLCPWCQNR*LALWKK
Trigger: TTTCTTCCAGAGAGCTAACCACCTGTTCTGACACCA...GGGACACAAGCCTAGAACAAATTCAATAAACCAGCCACAGACGTTATCATCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CCA 90 bp AGGGCCTCCACACCCCACCTTACTGCTTTAACCAATGTCCATCTAACTGTTCAGGTACTATTCAATAAATaGTGTCAGAACAGGTGGTTA +
Preference number: 4 (lower is better)
Translates to: RASTPHLTALTNVHLTVQVLFNK*CQNRWL
Trigger: TAACCACCTGTTCTGACACCATTTATTGAATAGTAC...CTGAACAGTTAGATGGACATTGGTTAAAGCAGTAAGGTGGGGTGTGGAGGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp AGGGCCTCCACACCCCACCTTACTGCTTTAACCAATGTCCATCTAACTGTTCAGGTACAGTCATCATTCTaGGATTTTGCTTTGTATGTA +
Preference number: 4 (lower is better)
Translates to: RASTPHLTALTNVHLTVQVQSSF*DFALYV
Trigger: TACATACAAAGCAAAATCCCAGAATGATGACTGTAC...CTGAACAGTTAGATGGACATTGGTTAAAGCAGTAAGGTGGGGTGTGGAGGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp ACTGTCCCTATGGGAAGACTTGGTATTTTTCAGATTTCCCTGCTGTTTATCAAGATGGATTGTACTGGTTaGCACAGAAGCCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: TVPMGRLGIFQISLLFIKMDCTG*HRSLLT
Trigger: AGTGAGGAGGCTTCTGTGCCAACCAGTACAATCCAT...CTTGATAAACAGCAGGGAAATCTGAAAAATACCAAGTCTTCCCATAGGGACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp TTCCAAACCCATGAGTTTCACTCTCAGGTTCCCTCTAGGAGCAGAAGTGCAGGTATTCCAGGCATAAAGTaGATTCTTTATATGCCTGTT +
Preference number: 4 (lower is better)
Translates to: FQTHEFHSQVPSRSRSAGIPGIK*ILYMPV
Trigger: AACAGGCATATAAAGAATCCACTTTATGCCTGGAAT...ACCTGCACTTCTGCTCCTAGAGGGAACCTGAGAGTGAAACTCATGGGTTTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CAA 72 bp CTTCTAGCCTCCAGAACTGTGAGAAGTAAGTATCTGTaGTTTAAGCCACCCAGCCTGTGGTATTCTGTTATA +
Preference number: 4 (lower is better)
Translates to: LLASRTVRSKYL*FKPPSLWYSVI
Trigger: TATAACAGAATACCACAGGCTGGGTGGCTTAAACAACAGATACTTACTTCTCACAGTTCTGGAGGCTAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CAA 72 bp CTGCCATTAAGGGACTTACAGTTTTTGGGTCTGTCTTaGATGCTGGAGACGCTCCTCAAATATTTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: LPLRDLQFLGLS*MLETLLKYLVN
Trigger: ATTCACCAAATATTTGAGGAGCGTCTCCAGCATCAAAGACAGACCCAAAAACTGTAAGTCCCTTAATGGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp GTGCTCTTAAGATCTCTGACTTTTGATCCGAGTAGGTGTCCAACTGTATGTGTTGGCATAGACAGAATATaGCAAGTCAGAGAGAATTCG +
Preference number: 4 (lower is better)
Translates to: VLLRSLTFDPSRCPTVCVGIDRI*QVRENS
Trigger: CGAATTCTCTCTGACTTGTCATATTCTGTCTATGCC...AACACATACAGTTGGACACCTACTCGGATCAAAAGTCAGAGATCTTAAGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp AGGCTAGTCAAGGTGATGATAGAAATGCCCAATCTTTTACACAGGCACAGGAGTAGAGTAGATGAATTGTaGGCTCATATAGCTGGAACA +
Preference number: 4 (lower is better)
Translates to: RLVKVMIEMPNLLHRHRSRVDEL*AHIAGT
Trigger: TGTTCCAGCTATATGAGCTCACAATTCATCTACTCT...ACTCCTGTGCCTGTGTAAAAGATTGGGCATTTCTATCATCACCTTGACTAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp AAAATGAAAGGATCAGATGTCCCCCATAAACAACTACTCTACTCAGTAGGAAGATCATCCTCTTCATCTTaGCAGTTCACCAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: KMKGSDVPHKQLLYSVGRSSSSS*QFTRGR
Trigger: TCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGA...TCTTCCTACTGAGTAGAGTAGTTGTTTATGGGGGACATCTGATCCTTTCATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR GCA 90 bp GTAACACTGTCCCTATGGGAAGACTTGGTATTTTTCAGATTTCCCTGCTGTTTACTCTGCTGCTTTTTCTaGATGCTATCTCTGGAATGG +
Preference number: 4 (lower is better)
Translates to: VTLSLWEDLVFFRFPCCLLCCFF*MLSLEW
Trigger: CCATTCCAGAGATAGCATGCAGAAAAAGCAGCAGAG...TAAACAGCAGGGAAATCTGAAAAATACCAAGTCTTCCCATAGGGACAGTGTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp AAAATGAAAGGATCAGATGTCCCCCATAAACAACTACTCTACTCAGTAGGAAGACAGGTAACCAGAAGCTaGCTTGTGGAGGAACTAAAC +
Preference number: 4 (lower is better)
Translates to: KMKGSDVPHKQLLYSVGRQVTRS*LVEELN
Trigger: GTTTAGTTCCTCCACAAGGCAGCTTCTGGTTACCTG...TCTTCCTACTGAGTAGAGTAGTTGTTTATGGGGGACATCTGATCCTTTCATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp CATCTGGTTTCCTATGACAACTGGAAAAGACTTCTTGGTGAATCCTCTGGAGGTATTCCAGGATCTTTCTaGGATACTGCTTACGTTTTG +
Preference number: 4 (lower is better)
Translates to: HLVSYDNWKRLLGESSGGIPGSF*DTAYVL
Trigger: CAAAACGTAAGCAGTATCCCAGAAAGATCCTGGAAT...ACCTCCAGAGGATTCACCAAGAAGTCTTTTCCAGTTGTCATAGGAAACCAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366976.3
ENST00000626725.1
CDS-3UTR CCA 90 bp CATGTCAGAGGTTTTCCTGGAAGCAGTCTCTGTTGGTGTGGTTTCTATCTGTGTGTTTCCTATGACAACTaGAAAAGACTTCTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: HVRGFPGSSLCWCGFYLCVSYDN*KRLLGE
Trigger: TTCACCAAGAAGTCTTTTCCAGTTGTCATAGGAAAC...ACACAGATAGAAACCACACCAACAGAGACTGCTTCCAGGAAAACCTCTGACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366976.3
CDS-3UTR TCA 90 bp AAAATGAAAGGATCAGATGTCCCCCATAAACAACTACTCTACTCAGTAGGAAGATTCAGCAGTCTTTTGTaGGAGGCTTCTTTCACTTGG +
Preference number: 4 (lower is better)
Translates to: KMKGSDVPHKQLLYSVGRFSSLL*EASFTW
Trigger: CCAAGTGAAAGAAGCCTCTCACAAAAGACTGCTGAA...TCTTCCTACTGAGTAGAGTAGTTGTTTATGGGGGACATCTGATCCTTTCATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp AAGAAAATGAAAGGATCAGATGTCCCCCATAAACAACTACTCTACTCAGTAGGAAAGCTTCTGAAACCCTaGAAAACTGAAACCCCGAGA +
Preference number: 4 (lower is better)
Translates to: KKMKGSDVPHKQLLYSVGKLLKP*KTETPR
Trigger: TCTCGGGGTTTCAGTTTTTCAGGGTTTCAGAAGCTT...TCCTACTGAGTAGAGTAGTTGTTTATGGGGGACATCTGATCCTTTCATTTTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp ACTGTCCCTATGGGAAGACTTGGTATTTTTCAGATTTCCCTGCTGTTTATCAAGCAAGCCATTAATGTGTaGGATTGTGATCCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: TVPMGRLGIFQISLLFIKQAINV*DCDPGK
Trigger: TTTCCCTGGATCACAATCTCACACATTAATGGCTTG...CTTGATAAACAGCAGGGAAATCTGAAAAATACCAAGTCTTCCCATAGGGACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp TGGTTTCCTATGACAACTGGAAAAGACTTCTTGGTGAATCCTCTGGAGGTGGATATGCTGATATTCTCTTaGACAGCTGATTCAAAAGTC +
Preference number: 4 (lower is better)
Translates to: WFPMTTGKDFLVNPLEVDMLIFS*TADSKV
Trigger: GACTTTTGAATCAGCTGTGCAAGAGAATATCAGCAT...ATCCACCTCCAGAGGATTCACCAAGAAGTCTTTTCCAGTTGTCATAGGAAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366976.3
ENST00000626725.1
CDS-3UTR GCA 90 bp TTTAGCATCTGGTTTCCTATGACAACTGGAAAAGACTTCTTGGTGAATCCTCTGTTATCTGAAGCTTCCTaGCATGCTTGCCCATTAATG +
Preference number: 4 (lower is better)
Translates to: FSIWFPMTTGKDFLVNPLLSEAS*HACPLM
Trigger: CATTAATGGGCAAGCATGGCAGGAAGCTTCAGATAA...CAGAGGATTCACCAAGAAGTCTTTTCCAGTTGTCATAGGAAACCAGATGCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366976.3
CDS-3UTR GCA 90 bp AAACAGTTTTTGGGAGGTAACACTGTCCCTATGGGAAGACTTGGTATTTTTCAGTCAAGACTGCTCAAATaGCACCTCTTCTACAAAGAC +
Preference number: 4 (lower is better)
Translates to: KQFLGGNTVPMGRLGIFQSRLLK*HLFYKD
Trigger: GTCTTTGTAGAAGAGGTGGCATTTGAGCAGTCTTGA...CTGAAAAATACCAAGTCTTCCCATAGGGACAGTGTTACCTCCCAAAAACTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp AAACAGTTTTTGGGAGGTAACACTGTCCCTATGGGAAGACTTGGTATTTTTCAGGCTGCTTTTTCTGCATaGTATCTCTGGAATGGGTAT +
Preference number: 4 (lower is better)
Translates to: KQFLGGNTVPMGRLGIFQAAFSA*YLWNGY
Trigger: ATACCCATTCCAGAGATAGCATGCAGAAAAAGCAGC...CTGAAAAATACCAAGTCTTCCCATAGGGACAGTGTTACCTCCCAAAAACTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp AGGCTAGTCAAGGTGATGATAGAAATGCCCAATCTTTTACACAGGCACAGGAGTACTGTTACAAACATATaGATTGTACTGGTTGGCACA +
Preference number: 4 (lower is better)
Translates to: RLVKVMIEMPNLLHRHRSTVTNI*IVLVGT
Trigger: TGTGCCAACCAGTACAATCCATATGTTTGTAACAGT...ACTCCTGTGCCTGTGTAAAAGATTGGGCATTTCTATCATCACCTTGACTAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp GTGCTCTTAAGATCTCTGACTTTTGATCCGAGTAGGTGTCCAACTGTATGTGTTTTAGTTTACAGCCCATaGGCAAAGTATGAGCAATGT +
Preference number: 4 (lower is better)
Translates to: VLLRSLTFDPSRCPTVCVLVYSP*AKYEQC
Trigger: ACATTGCTCATACTTTGCCCATGGGCTGTAAACTAA...AACACATACAGTTGGACACCTACTCGGATCAAAAGTCAGAGATCTTAAGAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp ACTGTCCCTATGGGAAGACTTGGTATTTTTCAGATTTCCCTGCTGTTTATCAAGGCCTTTTACCCAATCTaGGACACTATTACAGTTGTG +
Preference number: 4 (lower is better)
Translates to: TVPMGRLGIFQISLLFIKAFYPI*DTITVV
Trigger: CACAACTGTAATAGTGTCCCAGATTGGGTAAAAGGC...CTTGATAAACAGCAGGGAAATCTGAAAAATACCAAGTCTTCCCATAGGGACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp GAAATGGGCGTGGTAATAGCCCTTAATTCATGGATTGTCTTGAGGATTAAAAGAATAAGTTTTCTTCACTaGGACAGACCTTCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: EMGVVIALNSWIVLRIKRISFLH*DRPSGD
Trigger: GTCACCAGAAGGTCTGTCTCAGTGAAGAAAACTTAT...TCTTTTAATCCTCAAGACAATCCATGAATTAAGGGCTATTACCACGCCCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp AAGAAAATGAAAGGATCAGATGTCCCCCATAAACAACTACTCTACTCAGTAGGAATAATTAAGGTTAAATaGGGCCATAAGGGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: KKMKGSDVPHKQLLYSVGIIKVK*GHKGGA
Trigger: AGCCCCACCCTTATGGCCTCATTTAACCTTAATTAT...TCCTACTGAGTAGAGTAGTTGTTTATGGGGGACATCTGATCCTTTCATTTTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp ATATACAGCCATGTGAGCACCACTCAGATCAAGATACAGAACATTTTGCTCACCCCCACGATGAAAGAATaGCTAGCTATGATGATTTAT +
Preference number: 4 (lower is better)
Translates to: IYSHVSTTQIKIQNILLTPTMKE*LAMMIY
Trigger: ATAAATCATCATAGCTAGTCATTCTTTCATCGTGGG...GGTGAGCAAAATGTTCTGTATCTTGATCTGAGTGGTGCTCACATGGCTGTATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp AAGAAAATGAAAGGATCAGATGTCCCCCATAAACAACTACTCTACTCAGTAGGATTATCTGAAGCTTCCTaGCATGCTTGCCCATTAATG +
Preference number: 4 (lower is better)
Translates to: KKMKGSDVPHKQLLYSVGLSEAS*HACPLM
Trigger: CATTAATGGGCAAGCATGGCAGGAAGCTTCAGATAA...TCCTACTGAGTAGAGTAGTTGTTTATGGGGGACATCTGATCCTTTCATTTTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR GCA 90 bp TTGGTGAGATCTCTGGAGAATGGAACACCTTCACAGACAACATCAGGGATAAACTTTTTCAGATTTCCCTaGTGTTTATCAAGATGGCAT +
Preference number: 4 (lower is better)
Translates to: LVRSLENGTPSQTTSGINFFRFP*CLSRWH
Trigger: ATGCCATCTTGATAAACAGCAGGGAAATCTGAAAAA...GTTTATCCCTGATGTTGTCTGTGAAGGTGTTCCATTCTCCAGAGATCTCACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp GAAATGGGCGTGGTAATAGCCCTTAATTCATGGATTGTCTTGAGGATTAAAAGACTGGCTCAGAGACTATaGTCTTTAAGATCTCTGACT +
Preference number: 4 (lower is better)
Translates to: EMGVVIALNSWIVLRIKRLAQRL*SLRSLT
Trigger: AGTCAGAGATCTTAAAGAGCATAGTCTCTGAGCCAG...TCTTTTAATCCTCAAGACAATCCATGAATTAAGGGCTATTACCACGCCCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp GTGCTCTTAAGATCTCTGACTTTTGATCCGAGTAGGTGTCCAACTGTATGTGTTAACCACAGGCTTATCTaGACATCACTTATACCATTT +
Preference number: 4 (lower is better)
Translates to: VLLRSLTFDPSRCPTVCVNHRLI*TSLIPF
Trigger: AAATGGTATAAGTGATGTGCAGATAAGCCTGTGGTT...AACACATACAGTTGGACACCTACTCGGATCAAAAGTCAGAGATCTTAAGAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp AAAGTTCTCAGGTTTAGCATCTGGTTTCCTATGACAACTGGAAAAGACTTCTTGCTCAGGTTTAGCATCTaGTTTCCTATGACAACTGGA +
Preference number: 4 (lower is better)
Translates to: KVLRFSIWFPMTTGKDFLLRFSI*FPMTTG
Trigger: TCCAGTTGTCATAGGAAACCAGATGCTAAACCTGAG...CAAGAAGTCTTTTCCAGTTGTCATAGGAAACCAGATGCTAAACCTGAGAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366976.3
CDS-3UTR CCA 90 bp TTGGTGAGATCTCTGGAGAATGGAACACCTTCACAGACAACATCAGGGATAAACTCTGAAAACTATATATaGCTTTCAAGACTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: LVRSLENGTPSQTTSGINSENYI*LSRLAL
Trigger: CAAGGCAAGTCTTGAAAGCCATATATAGTTTTCAGA...GTTTATCCCTGATGTTGTCTGTGAAGGTGTTCCATTCTCCAGAGATCTCACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp CATCTGGTTTCCTATGACAACTGGAAAAGACTTCTTGGTGAATCCTCTGGAGGTCAACATCATGTTGAATaGGGAAAAGTTGAAAGCATT +
Preference number: 4 (lower is better)
Translates to: HLVSYDNWKRLLGESSGGQHHVE*GKVESI
Trigger: AATGCTTTCAACTTTTCCCCATTCAACATGATGTTG...ACCTCCAGAGGATTCACCAAGAAGTCTTTTCCAGTTGTCATAGGAAACCAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626725.1
3UTR CAA 72 bp AGAAAATCCAGTTCAAGCCAATTATTCAAACAGTTTTaGGGAGGTAACACTGTCCCTATGGGAAGACTTGGT +
Preference number: 4 (lower is better)
Translates to: RKSSSSQLFKQF*GGNTVPMGRLG
Trigger: ACCAAGTCTTCCCATAGGGACAGTGTTACCTCCCAAAAACTGTTTGAATAATTGGCTTGAACTGGATTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
3UTR CAA 72 bp TCTATCATACCATTTGCTGCATGGCATTATCATTGTTaGCACACTCATCCTCTTCACTGGAATATGACCTTC +
Preference number: 4 (lower is better)
Translates to: SIIPFAAWHYHC*HTHPLHWNMTF
Trigger: GAAGGTCATATTCCAGTGAAGAGGATGAGTGTGCAAACAATGATAATGCCATGCAGCAAATGGTATGATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR TCA 90 bp GTAACACTGTCCCTATGGGAAGACTTGGTATTTTTCAGATTTCCCTGCTGTTTATGTTGTTTAGTAATCTaGTGCCATTCCAATTCCTCT +
Preference number: 4 (lower is better)
Translates to: VTLSLWEDLVFFRFPCCLCCLVI*CHSNSS
Trigger: AGAGGAATTGGAATGGCATCAGATTACTAAACAACA...TAAACAGCAGGGAAATCTGAAAAATACCAAGTCTTCCCATAGGGACAGTGTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp GTAACACTGTCCCTATGGGAAGACTTGGTATTTTTCAGATTTCCCTGCTGTTTAACAACAGGGTGGTACTaGTTCAGAATTTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: VTLSLWEDLVFFRFPCCLTTGWY*FRISCF
Trigger: AAAACAAGAAATTCTGAAGCAGTACCACCCTGTTGT...TAAACAGCAGGGAAATCTGAAAAATACCAAGTCTTCCCATAGGGACAGTGTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CCA 90 bp GGTGTGGTTTCTATCTGTGTTATAAAGTTCTCAGGTTTAGCATCTGGTTTCCTAATTCCAGGATCTTTCTaGGATACTGCTTACGTTTTG +
Preference number: 4 (lower is better)
Translates to: GVVSICVIKFSGLASGFLIPGSF*DTAYVL
Trigger: CAAAACGTAAGCAGTATCCCAGAAAGATCCTGGAAT...TAGGAAACCAGATGCTAAACCTGAGAACTTTATAACACAGATAGAAACCACACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366976.3
CDS-3UTR CCA 90 bp ATAACAGGCTGCATCCTGAGAACTTGGGAAAATCCCTCTCCTTGTTCAATTAATGTTTCCTATGACAACTaGAAAAGACTTCTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: ITGCILRTWENPSPCSINVSYDN*KRLLGE
Trigger: TTCACCAAGAAGTCTTTTCCAGTTGTCATAGGAAAC...ATTAATTGAACAAGGAGAGGGATTTTCCCAAGTTCTCAGGATGCAGCCTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626725.1
CDS-3UTR CCA 90 bp ATATACAGCCATGTGAGCACCACTCAGATCAAGATACAGAACATTTTGCTCACCATTTTCTCTTCTTTCTaGGAGTACAGTCATCATTCT +
Preference number: 4 (lower is better)
Translates to: IYSHVSTTQIKIQNILLTIFSSF*EYSHHS
Trigger: AGAATGATGACTGTACTCCCAGAAAGAAGAGAAAAT...GGTGAGCAAAATGTTCTGTATCTTGATCTGAGTGGTGCTCACATGGCTGTATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CAA 72 bp TTGTTGTTTAGTAATCTGATGCCATTCCAATTCCTCTaGGTATTCCTCAGGTCTGGGAATGTTTCTTGTGTT +
Preference number: 4 (lower is better)
Translates to: LLFSNLMPFQFL*VFLRSGNVSCV
Trigger: AACACAAGAAACATTCCCAGACCTGAGGAATACCAAGAGGAATTGGAATGGCATCAGATTACTAAACAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CAA 72 bp TTTTCTGAAAACTATATATGGCTTTCAAGACTTGCCTaGAGACTCAGAGCTGTTTCACAACCCTTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: FSENYIWLSRLA*RLRAVSQPFVP
Trigger: TGGAACAAAGGGTTGTGAAACAGCTCTGAGTCTCAAGGCAAGTCTTGAAAGCCATATATAGTTTTCAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp AAGAAAATGAAAGGATCAGATGTCCCCCATAAACAACTACTCTACTCAGTAGGAGAAAGTTCAACCTGCTaGTACAAACATTTGTGTGTA +
Preference number: 4 (lower is better)
Translates to: KKMKGSDVPHKQLLYSVGESSTC*YKHLCV
Trigger: TACACACAAATGTTTGTAGCAGCAGGTTGAACTTTC...TCCTACTGAGTAGAGTAGTTGTTTATGGGGGACATCTGATCCTTTCATTTTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CCA 90 bp AAACAGTTTTTGGGAGGTAACACTGTCCCTATGGGAAGACTTGGTATTTTTCAGGATAACGTCTGTGGCTaGTTTATTGAATTTGTTCTA +
Preference number: 4 (lower is better)
Translates to: KQFLGGNTVPMGRLGIFQDNVCG*FIEFVL
Trigger: TAGAACAAATTCAATAAACCAGCCACAGACGTTATC...CTGAAAAATACCAAGTCTTCCCATAGGGACAGTGTTACCTCCCAAAAACTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CCA 90 bp GAAATGGGCGTGGTAATAGCCCTTAATTCATGGATTGTCTTGAGGATTAAAAGAACACTATTACAGTTGTaGCTTTACTCAATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: EMGVVIALNSWIVLRIKRTLLQL*LYSISS
Trigger: GGAAGAGATTGAGTAAAGCCACAACTGTAATAGTGT...TCTTTTAATCCTCAAGACAATCCATGAATTAAGGGCTATTACCACGCCCATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CAA 72 bp TTTTCAGAAACCAGCTTTGACAGTGTTCTCTCTTCTTaGGGACTAGACTTAACCTTCTTGTGTTCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: FSETSFDSVLSS*GLDLTFLCSSY
Trigger: ATAAGAAGAACACAAGAAGGTTAAGTCTAGTCCCAAAGAAGAGAGAACACTGTCAAAGCTGGTTTCTGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR GCA 90 bp GAAATGGGCGTGGTAATAGCCCTTAATTCATGGATTGTCTTGAGGATTAAAAGAAGATACAGAACATTTTaGTCACCCAAAAATGTTTCC +
Preference number: 4 (lower is better)
Translates to: EMGVVIALNSWIVLRIKRRYRTF*SPKNVS
Trigger: GGAAACATTTTTGGGTGAGCAAAATGTTCTGTATCT...TCTTTTAATCCTCAAGACAATCCATGAATTAAGGGCTATTACCACGCCCATTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366977.8
3UTR CAA 72 bp ATTTGTTCTTTATTCCTGTATTCCTTCCCTGATTATTaGCCTAAAACATTCAAGACTGCTCAAATGCCACCT +
Preference number: 4 (lower is better)
Translates to: ICSLFLYSFPDY*PKTFKTAQMPP
Trigger: AGGTGGCATTTGAGCAGTCTTGAATGTTTTAGGCAAATAATCAGGGAAGGAATACAGGAATAAAGAACAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS GCA 90 bp AGAGCGGGCTCCCGAATCTCCTCCGGCAGAGCGTCCCCGAGCTTTTaGACGAAGCGGCCGCACAGTTGTAGCATTTCGGTCACAGCCCGC +
Preference number: 5 (lower is better)
Translates to: RAGSRISSGRASPSF*TKRPHSCSISVTAR
Trigger: GCGGGCTGTGACCGAAATGCTACAACTGTGCGGCCGCTTCGTGCAAAAGCTCGGGGACGCTCTGCCGGAGGAGATTCGGGAGCCCGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366976.3
ENST00000366977.8
ENST00000487995.1
ENST00000626725.1
CDS GCA 90 bp AGCGGCCGCACAGTTGTAGCATTTCGGTCACAGCCCGCTTCGAGGTaGAGCGCACCCGAAAGTCTTCTCGGGGAGTGGCGGAGACCAAGG +
Preference number: 5 (lower is better)
Translates to: SGRTVVAFRSQPASR*SAPESLLGEWRRPR
Trigger: CCTTGGTCTCCGCCACTCCCCGAGAAGACTTTCGGGTGCGCTGCACCTCGAAGCGGGCTGTGACCGAAATGCTACAACTGTGCGGCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366976.3
ENST00000366977.8
ENST00000487995.1
ENST00000626725.1
CDS-3UTR CAA 90 bp GAGAGGCTGCCAGCCACCTCGGTGGGGTCCTCCCACAATCCTCCATGTGGCACGATGCCCCTGTCCACCTaGTCTCTGGGCACATCTGAT +
Preference number: 5 (lower is better)
Translates to: ERLPATSVGSSHNPPCGTMPLST*SLGTSD
Trigger: ATCAGATGTGCCCAGAGACAAGGTGGACAGGGGCAT...CGTGCCACATGGAGGATTGTGGGAGGACCCCACCGAGGTGGCTGGCAGCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CAA 90 bp GAGAGGCTGCCAGCCACCTCGGTGGGGTCCTCCCACAATCCTCCATGTGGCACGAGGCATGAGAACCTCTaGAACCTGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: ERLPATSVGSSHNPPCGTRHENL*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCAAGAGGTTCTCATGCCT...CGTGCCACATGGAGGATTGTGGGAGGACCCCACCGAGGTGGCTGGCAGCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp CCACCGACCACCTGGCTCATCTCAGCTCCCAGCGGCACTGTGTTACCCCTGAGGATGCCCCTGTCCACCTaGTCTCTGGGCACATCTGAT +
Preference number: 5 (lower is better)
Translates to: PPTTWLISAPSGTVLPLRMPLST*SLGTSD
Trigger: ATCAGATGTGCCCAGAGACAAGGTGGACAGGGGCAT...CCTCAGGGGTAACACAGTGCCGCTGGGAGCTGAGATGAGCCAGGTGGTCGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CAA 90 bp CCACCGACCACCTGGCTCATCTCAGCTCCCAGCGGCACTGTGTTACCCCTGAGGAGCAGAAGTGCAGGTTaGCTTGGGCTCCTAGCCTCT +
Preference number: 5 (lower is better)
Translates to: PPTTWLISAPSGTVLPLRSRSAG*LGLLAS
Trigger: AGAGGCTAGGAGCCCAAGCAAACCTGCACTTCTGCT...CCTCAGGGGTAACACAGTGCCGCTGGGAGCTGAGATGAGCCAGGTGGTCGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp CCAAATGACTTCTGTGCAACAACAGAGCCGAGCCCGGTCCCAGGGGCTGGATGGCTGACGGCAAATTGCTaGTGGGCAGGGTCTGTGCCT +
Preference number: 5 (lower is better)
Translates to: PNDFCATTEPSPVPGAGWLTANC*WAGSVP
Trigger: AGGCACAGACCCTGCCCACAAGCAATTTGCCGTCAG...CCATCCAGCCCCTGGGACCGGGCTCGGCTCTGTTGTTGCACAGAAGTCATTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp CCAAATGACTTCTGTGCAACAACAGAGCCGAGCCCGGTCCCAGGGGCTGGATGGGAATTTGTTCTAGGCTaGTGTCCCCCACCGACCACC +
Preference number: 5 (lower is better)
Translates to: PNDFCATTEPSPVPGAGWEFVLG*CPPPTT
Trigger: GGTGGTCGGTGGGGGACACAAGCCTAGAACAAATTC...CCATCCAGCCCCTGGGACCGGGCTCGGCTCTGTTGTTGCACAGAAGTCATTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CAA 90 bp TCCTCTCAGAGGCCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACTGCCGAGAATTTGTTCTAGGCTaGTGTCCCCCACCGACCACC +
Preference number: 5 (lower is better)
Translates to: SSQRPSSPVYSGLGDDCREFVLG*CPPPTT
Trigger: GGTGGTCGGTGGGGGACACAAGCCTAGAACAAATTC...TCGGCAGTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGGCCTCTGAGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CAA 90 bp CCTCTGGAGGTGGATAACAGGCTGCATCCTGAGAACTTGGGAAAATCCCTCTCCAGCGTCCCCGAGCTTTaGCACGAAGCGGCCGCACAG +
Preference number: 5 (lower is better)
Translates to: PLEVDNRLHPENLGKSLSSVPEL*HEAAAQ
Trigger: CTGTGCGGCCGCTTCGTGCAAAAGCTCGGGGACGCT...GGAGAGGGATTTTCCCAAGTTCTCAGGATGCAGCCTGTTATCCACCTCCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366976.3
ENST00000626725.1
CDS-3UTR CAA 90 bp CCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACTGCCGAGAGAGGGAGGGCACTGGAAAAGACTTCTaGGTGAATCCTCTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: PSSPVYSGLGDDCREREGTGKDF*VNPLEV
Trigger: CACCTCCAGAGGATTCACCAAGAAGTCTTTTCCAGT...GCCCTCCCTCTCTCGGCAGTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp GAGCCACTCTGCAGTCCTCAAATGCAGAGTGATTGGGTCACTCTCCATGGTGTCAGGTGGGAGGATGGCTaGAGTTGCGGGGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: EPLCSPQMQSDWVTLHGVRWEDG*SCGGRG
Trigger: ACCTCTGCCCCCGCAACTCAAGCCATCCTCCCACCT...GACACCATGGAGAGTGACCCAATCACTCTGCATTTGAGGACTGCAGAGTGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp GCTGTGTCCTCTCAGAGGCCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACGGAGGTTGCAGTGAGTaGAGATCGCTCCACTACACT +
Preference number: 5 (lower is better)
Translates to: AVSSQRPSSPVYSGLGDDGGCSE*RSLHYT
Trigger: AGTGTAGTGGAGCGATCTCAACTCACTGCAACCTCC...GTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGGCCTCTGAGAGGACACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp AATGTCCAGACCGCTGAGCCACTCTGCAGTCCTCAAATGCAGAGTGATTGGGTCCAGTCTACTCCGGCCTaGGAGATGACTGCCGAGAGA +
Preference number: 5 (lower is better)
Translates to: NVQTAEPLCSPQMQSDWVQSTPA*EMTAER
Trigger: TCTCTCGGCAGTCATCTCCAAGGCCGGAGTAGACTG...GACCCAATCACTCTGCATTTGAGGACTGCAGAGTGGCTCAGCGGTCTGGACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CAA 90 bp CCACCGACCACCTGGCTCATCTCAGCTCCCAGCGGCACTGTGTTACCCCTGAGGTCCCTATGGGAAGACTaGGTATTTTTCAGATTTCCC +
Preference number: 5 (lower is better)
Translates to: PPTTWLISAPSGTVLPLRSLWED*VFFRFP
Trigger: GGGAAATCTGAAAAATACCAAGTCTTCCCATAGGGA...CCTCAGGGGTAACACAGTGCCGCTGGGAGCTGAGATGAGCCAGGTGGTCGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CAA 90 bp GGAGGTGGTCATCTACAAGTCGGGAAGACAGCCCTCACCAGAAACTGCATTTGCCTGTTTCACAACCCTTaGTTCCAGGCAGGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: GGGHLQVGKTALTRNCICLFHNP*FQAGPR
Trigger: CCTGGGCCCTGCCTGGAACAAAGGGTTGTGAAACAG...GCAAATGCAGTTTCTGGTGAGGGCTGTCTTCCCGACTTGTAGATGACCACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp CCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACTGCCGAGAGAGGGAGGGCACGCTCCTCAAATATTaGGTGAATCAGTTTTGTGCA +
Preference number: 5 (lower is better)
Translates to: PSSPVYSGLGDDCREREGTLLKY*VNQFCA
Trigger: TGCACAAAACTGATTCACCAAATATTTGAGGAGCGT...GCCCTCCCTCTCTCGGCAGTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp TCAATGTCCAGACCGCTGAGCCACTCTGCAGTCCTCAAATGCAGAGTGATTGGGTGGACTGGTGAAGAGTaGTGTGGAGGGTGGCATTCC +
Preference number: 5 (lower is better)
Translates to: SMSRPLSHSAVLKCRVIGWTGEE*CGGWHS
Trigger: GGAATGCCACCCTCCACACAACTCTTCACCAGTCCA...CCCAATCACTCTGCATTTGAGGACTGCAGAGTGGCTCAGCGGTCTGGACATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp TCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGTTCCCCGATCCCCTTCTCTCCATTCCAATTCCTCTaGGTATTCCTCAGGTCTGGG +
Preference number: 5 (lower is better)
Translates to: SCQFTRGRRDEGSPIPFSPFQFL*VFLRSG
Trigger: CCCAGACCTGAGGAATACCAAGAGGAATTGGAATGG...AGAGAAGGGGATCGGGGAACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp ATAACAGGCTGCATCCTGAGAACTTGGGAAAATCCCTCTCCTTGTTCAATTAATAGCGTCCCCGAGCTTTaGCACGAAGCGGCCGCACAG +
Preference number: 5 (lower is better)
Translates to: ITGCILRTWENPSPCSINSVPEL*HEAAAQ
Trigger: CTGTGCGGCCGCTTCGTGCAAAAGCTCGGGGACGCT...ATTAATTGAACAAGGAGAGGGATTTTCCCAAGTTCTCAGGATGCAGCCTGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626725.1
CDS-3UTR CAA 90 bp GCTGTGTCCTCTCAGAGGCCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACTCCTTCCCTGATTATTaGCCTAAAACATTCAAGACT +
Preference number: 5 (lower is better)
Translates to: AVSSQRPSSPVYSGLGDDSFPDY*PKTFKT
Trigger: AGTCTTGAATGTTTTAGGCAAATAATCAGGGAAGGA...GTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGGCCTCTGAGAGGACACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp CGGGCTCTGGGTCACCCAGCTTCATCCTCTTCATCTTGCCAGTTCACCAGAGGCAATCATTTTACAATATaGTCTGGCACATGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: RALGHPASSSSSCQFTRGNHFTI*SGTWLG
Trigger: TCCCAGCCATGTGCCAGACAATATTGTAAAATGATT...GCCTCTGGTGAACTGGCAAGATGAAGAGGATGAAGCTGGGTGACCCAGAGCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp GTGTCCTCTCAGAGGCCCTCCAGTCCAGTCTACTCCGGCCTTGGAGATGACTGCAGACAAAATCATTTCTaGCAAGCAGGTAATTCCACA +
Preference number: 5 (lower is better)
Translates to: VSSQRPSSPVYSGLGDDCRQNHF*QAGNST
Trigger: TGTGGAATTACCTGCTTGCAAGAAATGATTTTGTCT...GCAGTCATCTCCAAGGCCGGAGTAGACTGGACTGGAGGGCCTCTGAGAGGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp TTGGTGAGATCTCTGGAGAATGGAACACCTTCACAGACAACATCAGGGATAAACCAGTCTACTCCGGCCTaGGAGATGACTGCCGAGAGA +
Preference number: 5 (lower is better)
Translates to: LVRSLENGTPSQTTSGINQSTPA*EMTAER
Trigger: TCTCTCGGCAGTCATCTCCAAGGCCGGAGTAGACTG...GTTTATCCCTGATGTTGTCTGTGAAGGTGTTCCATTCTCCAGAGATCTCACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp AAAATGAAAGGATCAGATGTCCCCCATAAACAACTACTCTACTCAGTAGGAAGAAGCGTCCCCGAGCTTTaGCACGAAGCGGCCGCACAG +
Preference number: 5 (lower is better)
Translates to: KMKGSDVPHKQLLYSVGRSVPEL*HEAAAQ
Trigger: CTGTGCGGCCGCTTCGTGCAAAAGCTCGGGGACGCT...TCTTCCTACTGAGTAGAGTAGTTGTTTATGGGGGACATCTGATCCTTTCATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp TCATCCTCTTCATCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGTTCCCCGACAGGATGTATTCTCTaGTGCCTGGCTTTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: SSSSSCQFTRGRRDEGSPTGCIL*CLALLL
Trigger: AAGAAGCAAAGCCAGGCACAAGAGAATACATCCTGT...CGGGGAACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp AGGCTAGTCAAGGTGATGATAGAAATGCCCAATCTTTTACACAGGCACAGGAGTTGTAATCACAGCACTTaGGGAGGCCAGGGCGAGTGG +
Preference number: 5 (lower is better)
Translates to: RLVKVMIEMPNLLHRHRSCNHST*GGQGEW
Trigger: CCACTCGCCCTGGCCTCCCAAAGTGCTGTGATTACA...ACTCCTGTGCCTGTGTAAAAGATTGGGCATTTCTATCATCACCTTGACTAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp AGGTGGATAACAGGCTGCATCCTGAGAACTTGGGAAAATCCCTCTCCTTGTTCACTGCATCCTGAGAACTaGGGAAAATCCCTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: RWITGCILRTWENPSPCSLHPEN*GKSLSL
Trigger: CAAGGAGAGGGATTTTCCCAAGTTCTCAGGATGCAG...TGAACAAGGAGAGGGATTTTCCCAAGTTCTCAGGATGCAGCCTGTTATCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626725.1
CDS-3UTR CAA 90 bp GTGAATCCTCTGGAGGTGGATAACAGGCTGCATCCTGAGAACTTGGGAAAATCCACTGGAAAAGACTTCTaGGTGAATCCTCTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: VNPLEVDNRLHPENLGKSTGKDF*VNPLEV
Trigger: CACCTCCAGAGGATTCACCAAGAAGTCTTTTCCAGT...GGATTTTCCCAAGTTCTCAGGATGCAGCCTGTTATCCACCTCCAGAGGATTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366976.3
ENST00000626725.1
CDS-3UTR CAA 90 bp TCATCCTCTTCATCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGTTCCCCGCTATGGAGTAAAACTTaGGGCTCTCAAGAGGATTTC +
Preference number: 5 (lower is better)
Translates to: SSSSSCQFTRGRRDEGSPLWSKT*GSQEDF
Trigger: GAAATCCTCTTGAGAGCCCAAAGTTTTACTCCATAG...CGGGGAACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp TCATCCTCTTCATCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGTTCCCCGAGTGTTCTCTCTTCTTaGGGACTAGACTTAACCTTC +
Preference number: 5 (lower is better)
Translates to: SSSSSCQFTRGRRDEGSPSVLSS*GLDLTF
Trigger: GAAGGTTAAGTCTAGTCCCAAAGAAGAGAGAACACT...CGGGGAACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp CTTTCAAGACTTGCCTTGAGACTCAGAGCTGTTTCACAACCCTTTGTTCCAGGCCACCAGAAACTGCATTaGCCAGCACCTTCTCATGGA +
Preference number: 5 (lower is better)
Translates to: LSRLALRLRAVSQPFVPGHQKLH*PAPSHG
Trigger: TCCATGAGAAGGTGCTGGCAAATGCAGTTTCTGGTG...GCCTGGAACAAAGGGTTGTGAAACAGCTCTGAGTCTCAAGGCAAGTCTTGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp CCCTCTGATGGACACCAGCACAGCACGGACTTTCCCGTCCTGTCTCTTCATGGTCATCTATCATACCATTaGCTGCATGGCATTATCATT +
Preference number: 5 (lower is better)
Translates to: PSDGHQHSTDFPVLSLHGHLSYH*LHGIII
Trigger: AATGATAATGCCATGCAGCAAATGGTATGATAGATG...ACCATGAAGAGACAGGACGGGAAAGTCCGTGCTGTGCTGGTGTCCATCAGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp TCAATGTCCAGACCGCTGAGCCACTCTGCAGTCCTCAAATGCAGAGTGATTGGGGGGACACTATTACAGTaGTGGCTTTACTCAATCTCT +
Preference number: 5 (lower is better)
Translates to: SMSRPLSHSAVLKCRVIGGTLLQ*WLYSIS
Trigger: AGAGATTGAGTAAAGCCACAACTGTAATAGTGTCCC...CCCAATCACTCTGCATTTGAGGACTGCAGAGTGGCTCAGCGGTCTGGACATTGA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp TTGGTGAGATCTCTGGAGAATGGAACACCTTCACAGACAACATCAGGGATAAACGTGTTACCCCTGAGGTaGGCTCCTCTTCAATGTCCA +
Preference number: 5 (lower is better)
Translates to: LVRSLENGTPSQTTSGINVLPLR*APLQCP
Trigger: TGGACATTGAAGAGGAGCCAACCTCAGGGGTAACAC...GTTTATCCCTGATGTTGTCTGTGAAGGTGTTCCATTCTCCAGAGATCTCACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp GTAACACTGTCCCTATGGGAAGACTTGGTATTTTTCAGATTTCCCTGCTGTTTAGAGACACCAGAGAGCTaGCACTCTGTCCCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: VTLSLWEDLVFFRFPCCLETPES*HSVPLS
Trigger: GGAGAGAGGGACAGAGTGCAAGCTCTCTGGTGTCTC...TAAACAGCAGGGAAATCTGAAAAATACCAAGTCTTCCCATAGGGACAGTGTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp AATGTCCAGACCGCTGAGCCACTCTGCAGTCCTCAAATGCAGAGTGATTGGGTCTTACAAACATATGGATaGTACTGGTTGGCACAGAAG +
Preference number: 5 (lower is better)
Translates to: NVQTAEPLCSPQMQSDWVLQTYG*YWLAQK
Trigger: CTTCTGTGCCAACCAGTACAATCCATATGTTTGTAA...GACCCAATCACTCTGCATTTGAGGACTGCAGAGTGGCTCAGCGGTCTGGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp TCTTGCCAGTTCACCAGAGGCAGAAGGGATGAAGGTTCCCCGATCCCCTTCTCTTTAAAGGAAGAATACTaGGGTTGGGCTTACAAGAAA +
Preference number: 5 (lower is better)
Translates to: SCQFTRGRRDEGSPIPFSLKEEY*GWAYKK
Trigger: TTTCTTGTAAGCCCAACCCAAGTATTCTTCCTTTAA...AGAGAAGGGGATCGGGGAACCTTCATCCCTTCTGCCTCTGGTGAACTGGCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp TCTGACTCGAGGAGGGCCCTCAGCGCAGAGAAAATTAAGTCTAGTGTTTGCAGGTTATGGACTCAATGTTaGTGTCCCCCTAAAATCTGT +
Preference number: 5 (lower is better)
Translates to: SDSRRALSAEKIKSSVCRLWTQC*CPPKIC
Trigger: ACAGATTTTAGGGGGACACAAACATTGAGTCCATAA...CCTGCAAACACTAGACTTAATTTTCTCTGCGCTGAGGGCCCTCCTCGAGTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp GAGCCACTCTGCAGTCCTCAAATGCAGAGTGATTGGGTCACTCTCCATGGTGTCCTGAAAATATCTCTTTaGGAGTCCTACATAGTCCTT +
Preference number: 5 (lower is better)
Translates to: EPLCSPQMQSDWVTLHGVLKISL*ESYIVL
Trigger: AAGGACTATGTAGGACTCCAAAAGAGATATTTTCAG...GACACCATGGAGAGTGACCCAATCACTCTGCATTTGAGGACTGCAGAGTGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp ACCAAAGGAAAAGGTGATCAGAAGGCAACTATACCTGCTAGCACAGTGATGTCATATGGATTGTACTGGTaGGCACAGAAGCCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: TKGKGDQKATIPASTVMSYGLYW*AQKPPH
Trigger: GTGAGGAGGCTTCTGTGCCAACCAGTACAATCCATA...TGACATCACTGTGCTAGCAGGTATAGTTGCCTTCTGATCACCTTTTCCTTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp ACTGTCCCTATGGGAAGACTTGGTATTTTTCAGATTTCCCTGCTGTTTATCAAGTCACCGTCCCCTTTGTaGCCACATCTCGCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: TVPMGRLGIFQISLLFIKSPSPL*PHLAAS
Trigger: AGAAGCTGCGAGATGTGGCAACAAAGGGGACGGTGA...CTTGATAAACAGCAGGGAAATCTGAAAAATACCAAGTCTTCCCATAGGGACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp CTCTGGAGGTGGATAACAGGCTGCATCCTGAGAACTTGGGAAAATCCCTCTCCTACAGCCAACATCATGTaGAATGGGGAAAAGTTGAAA +
Preference number: 5 (lower is better)
Translates to: LWRWITGCILRTWENPSPTANIM*NGEKLK
Trigger: TTTCAACTTTTCCCCATTCAACATGATGTTGGCTGT...AGGAGAGGGATTTTCCCAAGTTCTCAGGATGCAGCCTGTTATCCACCTCCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000626725.1
CDS-3UTR CAA 90 bp CTGGAGGTGGATAACAGGCTGCATCCTGAGAACTTGGGAAAATCCCTCTCCTTGTTTGCTTTTATGGTTTaGATGACACATTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: LEVDNRLHPENLGKSLSLFAFMV*MTHSRI
Trigger: GATCCTGGAATGTGTCATCAAAACCATAAAAGCAAA...CAAGGAGAGGGATTTTCCCAAGTTCTCAGGATGCAGCCTGTTATCCACCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366976.3
ENST00000626725.1
CDS-3UTR CAA 90 bp GTAACACTGTCCCTATGGGAAGACTTGGTATTTTTCAGATTTCCCTGCTGTTTAGTGTTACCCCTGAGGTaGGCTCCTCTTCAATGTCCA +
Preference number: 5 (lower is better)
Translates to: VTLSLWEDLVFFRFPCCLVLPLR*APLQCP
Trigger: TGGACATTGAAGAGGAGCCAACCTCAGGGGTAACAC...TAAACAGCAGGGAAATCTGAAAAATACCAAGTCTTCCCATAGGGACAGTGTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CAA 90 bp ATCTGCACATCACTTATACCATTTGGTGAGATCTCTGGAGAATGGAACACCTTCCTGCATCCTGAGAACTaGGGAAAATCCCTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: ICTSLIPFGEISGEWNTFLHPEN*GKSLSL
Trigger: CAAGGAGAGGGATTTTCCCAAGTTCTCAGGATGCAG...GAAGGTGTTCCATTCTCCAGAGATCTCACCAAATGGTATAAGTGATGTGCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp CTCTGCAGTCCTCAAATGCAGAGTGATTGGGTCACTCTCCATGGTGTCCATGAGCTCTTGTGCCTGGCTTaGCTTCTTTTATTCAATATA +
Preference number: 5 (lower is better)
Translates to: LCSPQMQSDWVTLHGVHELLCLA*LLLFNI
Trigger: TATATTGAATAAAAGAAGCAAAGCCAGGCACAAGAG...CTCATGGACACCATGGAGAGTGACCCAATCACTCTGCATTTGAGGACTGCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp ATCTGCACATCACTTATACCATTTGGTGAGATCTCTGGAGAATGGAACACCTTCTTTTTGGGTCTGTCTTaGATGCTGGAGACGCTCCTC +
Preference number: 5 (lower is better)
Translates to: ICTSLIPFGEISGEWNTFFLGLS*MLETLL
Trigger: GAGGAGCGTCTCCAGCATCAAAGACAGACCCAAAAA...GAAGGTGTTCCATTCTCCAGAGATCTCACCAAATGGTATAAGTGATGTGCAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp TCTGACTCGAGGAGGGCCCTCAGCGCAGAGAAAATTAAGTCTAGTGTTTGCAGGTGCTGCTACAAACATTaGTGTGTAAGTTATTGTGTG +
Preference number: 5 (lower is better)
Translates to: SDSRRALSAEKIKSSVCRCCYKH*CVSYCV
Trigger: CACACAATAACTTACACACAAATGTTTGTAGCAGCA...CCTGCAAACACTAGACTTAATTTTCTCTGCGCTGAGGGCCCTCCTCGAGTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp AAACAGTTTTTGGGAGGTAACACTGTCCCTATGGGAAGACTTGGTATTTTTCAGCGAGTGTGCTGTGTTTaGGGAGCCTTAGTTTCCCAG +
Preference number: 5 (lower is better)
Translates to: KQFLGGNTVPMGRLGIFQRVCCV*GALVSQ
Trigger: CTGGGAAACTAAGGCTCCCAAAACACAGCACACTCG...CTGAAAAATACCAAGTCTTCCCATAGGGACAGTGTTACCTCCCAAAAACTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp AAACAGTTTTTGGGAGGTAACACTGTCCCTATGGGAAGACTTGGTATTTTTCAGTTCATCCTCTTCATCTaGCCAGTTCACCAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: KQFLGGNTVPMGRLGIFQFILFI*PVHQRQ
Trigger: CTGCCTCTGGTGAACTGGCAAGATGAAGAGGATGAA...CTGAAAAATACCAAGTCTTCCCATAGGGACAGTGTTACCTCCCAAAAACTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CAA 90 bp AGAACTTGGGAAAATCCCTCTCCTTGTTCAATTAATGCAGGCAAGGACTTCATGACTGGAAAAGACTTCTaGGTGAATCCTCTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: RTWENPSPCSINAGKDFMTGKDF*VNPLEV
Trigger: CACCTCCAGAGGATTCACCAAGAAGTCTTTTCCAGT...CATGAAGTCCTTGCCTGCATTAATTGAACAAGGAGAGGGATTTTCCCAAGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626725.1
CDS-3UTR CAA 90 bp TTGGTGAGATCTCTGGAGAATGGAACACCTTCACAGACAACATCAGGGATAAACTTGGTTTTATTCACTTaGTCCTCTACGGAGCCCAAG +
Preference number: 5 (lower is better)
Translates to: LVRSLENGTPSQTTSGINLVLFT*SSTEPK
Trigger: CTTGGGCTCCGTAGAGGACAAAGTGAATAAAACCAA...GTTTATCCCTGATGTTGTCTGTGAAGGTGTTCCATTCTCCAGAGATCTCACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp AAAGTTCTCAGGTTTAGCATCTGGTTTCCTATGACAACTGGAAAAGACTTCTTGCTGCATCCTGAGAACTaGGGAAAATCCCTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: KVLRFSIWFPMTTGKDFLLHPEN*GKSLSL
Trigger: CAAGGAGAGGGATTTTCCCAAGTTCTCAGGATGCAG...CAAGAAGTCTTTTCCAGTTGTCATAGGAAACCAGATGCTAAACCTGAGAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366976.3
CDS-3UTR CAA 90 bp ATATACAGCCATGTGAGCACCACTCAGATCAAGATACAGAACATTTTGCTCACCAGGGACTTACAGTTTTaGGGTCTGTCTTTGATGCTG +
Preference number: 5 (lower is better)
Translates to: IYSHVSTTQIKIQNILLTRDLQF*GLSLML
Trigger: CAGCATCAAAGACAGACCCAAAAACTGTAAGTCCCT...GGTGAGCAAAATGTTCTGTATCTTGATCTGAGTGGTGCTCACATGGCTGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp CATCTGGTTTCCTATGACAACTGGAAAAGACTTCTTGGTGAATCCTCTGGAGGTTTGAATGGGGAAAAGTaGAAAGCATTCCCGTTGAGA +
Preference number: 5 (lower is better)
Translates to: HLVSYDNWKRLLGESSGGLNGEK*KAFPLR
Trigger: TCTCAACGGGAATGCTTTCAACTTTTCCCCATTCAA...ACCTCCAGAGGATTCACCAAGAAGTCTTTTCCAGTTGTCATAGGAAACCAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000626725.1
CDS-3UTR CAA 90 bp TCAGTACCATGTCAGAGGTTTTCCTGGAAGCAGTCTCTGTTGGTGTGGTTTCTATTTGCTTTTATGGTTTaGATGACACATTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: SVPCQRFSWKQSLLVWFLFAFMV*MTHSRI
Trigger: GATCCTGGAATGTGTCATCAAAACCATAAAAGCAAA...TAGAAACCACACCAACAGAGACTGCTTCCAGGAAAACCTCTGACATGGTACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366976.3
CDS-3UTR CAA 90 bp GTGCTCTTAAGATCTCTGACTTTTGATCCGAGTAGGTGTCCAACTGTATGTGTTTCCCTATGGGAAGACTaGGTATTTTTCAGATTTCCC +
Preference number: 5 (lower is better)
Translates to: VLLRSLTFDPSRCPTVCVSLWED*VFFRFP
Trigger: GGGAAATCTGAAAAATACCAAGTCTTCCCATAGGGA...AACACATACAGTTGGACACCTACTCGGATCAAAAGTCAGAGATCTTAAGAGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp AAAATGAAAGGATCAGATGTCCCCCATAAACAACTACTCTACTCAGTAGGAAGATGGAAGCAGTCTCTGTaGGTGTGGTTTCTATCTGTG +
Preference number: 5 (lower is better)
Translates to: KMKGSDVPHKQLLYSVGRWKQSL*VWFLSV
Trigger: CACAGATAGAAACCACACCAACAGAGACTGCTTCCA...TCTTCCTACTGAGTAGAGTAGTTGTTTATGGGGGACATCTGATCCTTTCATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS CCA 90 bp TCTTTTCAGTACCATGTCAGAGGTTTTCCTGGAAGCAGTCTCTGTTaGTGTGGTTTCTATCTGTGTTATAAAGTTCTCAGGTTTAGCATC +
Preference number: 5 (lower is better)
Translates to: SFQYHVRGFPGSSLC*CGFYLCYKVLRFSI
Trigger: GATGCTAAACCTGAGAACTTTATAACACAGATAGAAACCACACCAACAGAGACTGCTTCCAGGAAAACCTCTGACATGGTACTGAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp TGTTATAAAGTTCTCAGGTTTAGCATCTGGTTTCCTATGACAACTGGAAAAGACTGGAAGCAGTCTCTGTaGGTGTGGTTTCTATCTGTG +
Preference number: 5 (lower is better)
Translates to: CYKVLRFSIWFPMTTGKDWKQSL*VWFLSV
Trigger: CACAGATAGAAACCACACCAACAGAGACTGCTTCCA...GTCTTTTCCAGTTGTCATAGGAAACCAGATGCTAAACCTGAGAACTTTATAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366976.3
CDS-3UTR CAA 90 bp TCTGATGATAACGTCTGTGGCTGGTTTATTGAATTTGTTCTAGGCTTGTGTCCCCATCACTTATACCATTaGGTGAGATCTCTGGAGAAT +
Preference number: 5 (lower is better)
Translates to: SDDNVCGWFIEFVLGLCPHHLYH*VRSLEN
Trigger: ATTCTCCAGAGATCTCACCAAATGGTATAAGTGATG...GGGACACAAGCCTAGAACAAATTCAATAAACCAGCCACAGACGTTATCATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp AAACAGTTTTTGGGAGGTAACACTGTCCCTATGGGAAGACTTGGTATTTTTCAGTTTGTTTCTGTAGATTaGCCTGTTCTGGACAGTTCA +
Preference number: 5 (lower is better)
Translates to: KQFLGGNTVPMGRLGIFQFVSVD*PVLDSS
Trigger: TGAACTGTCCAGAACAGGCAAATCTACAGAAACAAA...CTGAAAAATACCAAGTCTTCCCATAGGGACAGTGTTACCTCCCAAAAACTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366977.8
CDS-3UTR CAA 90 bp ACTGTCCCTATGGGAAGACTTGGTATTTTTCAGATTTCCCTGCTGTTTATCAAGTTTGCTTTTATGGTTTaGATGACACATTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: TVPMGRLGIFQISLLFIKFAFMV*MTHSRI
Trigger: GATCCTGGAATGTGTCATCAAAACCATAAAAGCAAA...CTTGATAAACAGCAGGGAAATCTGAAAAATACCAAGTCTTCCCATAGGGACAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS-3UTR CAA 90 bp AAACAGTTTTTGGGAGGTAACACTGTCCCTATGGGAAGACTTGGTATTTTTCAGTTTGCTTTTATGGTTTaGATGACACATTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: KQFLGGNTVPMGRLGIFQFAFMV*MTHSRI
Trigger: GATCCTGGAATGTGTCATCAAAACCATAAAAGCAAA...CTGAAAAATACCAAGTCTTCCCATAGGGACAGTGTTACCTCCCAAAAACTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000366977.8
ENST00000366978.5
CDS CAA 90 bp GTGGCGGAGACCAAGGCCTGGCTCTCTGTGCCAGCCGCGAGCTCCTaGTCCCATGGAGGGTCAAGGACCACCAACTCAGGAGACCCCGCC +
Preference number: 6 (lower is better)
Translates to: VAETKAWLSVPAASS*SHGGSRTTNSGDPA
Trigger: GGCGGGGTCTCCTGAGTTGGTGGTCCTTGACCCTCCATGGGACAAGGAGCTCGCGGCTGGCACAGAGAGCCAGGCCTTGGTCTCCGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366976.3
ENST00000366977.8
ENST00000487995.1
ENST00000626725.1
CDS CCA 72 bp CTGGCTCTCTGTGCCAGCCGCGAGCTCCTTGTCCCATaGAGGGTCAAGGACCACCAACTCAGGAGACCCCGC +
Preference number: 6 (lower is better)
Translates to: LALCASRELLVP*RVKDHQLRRPR
Trigger: GCGGGGTCTCCTGAGTTGGTGGTCCTTGACCCTCCATGGGACAAGGAGCTCGCGGCTGGCACAGAGAGCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366976.3
ENST00000366977.8
ENST00000487995.1
ENST00000626725.1
CDS CAA 72 bp ACCAAGGCCTGGCTCTCTGTGCCAGCCGCGAGCTCCTaGTCCCATGGAGGGTCAAGGACCACCAACTCAGGA +
Preference number: 6 (lower is better)
Translates to: TKAWLSVPAASS*SHGGSRTTNSG
Trigger: TCCTGAGTTGGTGGTCCTTGACCCTCCATGGGACAAGGAGCTCGCGGCTGGCACAGAGAGCCAGGCCTTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366976.3
ENST00000366977.8
ENST00000487995.1
ENST00000626725.1
CDS GCA 72 bp ACAGTTGTAGCATTTCGGTCACAGCCCGCTTCGAGGTaGAGCGCACCCGAAAGTCTTCTCGGGGAGTGGCGG +
Preference number: 6 (lower is better)
Translates to: TVVAFRSQPASR*SAPESLLGEWR
Trigger: CCGCCACTCCCCGAGAAGACTTTCGGGTGCGCTGCACCTCGAAGCGGGCTGTGACCGAAATGCTACAACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366976.3
ENST00000366977.8
ENST00000487995.1
ENST00000626725.1
CDS GCA 72 bp TCCCGAATCTCCTCCGGCAGAGCGTCCCCGAGCTTTTaGACGAAGCGGCCGCACAGTTGTAGCATTTCGGTC +
Preference number: 6 (lower is better)
Translates to: SRISSGRASPSF*TKRPHSCSISV
Trigger: GACCGAAATGCTACAACTGTGCGGCCGCTTCGTGCAAAAGCTCGGGGACGCTCTGCCGGAGGAGATTCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366976.3
ENST00000366977.8
ENST00000487995.1
ENST00000626725.1
CDS TCA 72 bp TGCTTGCCCATTAATGCTGATATTCTCTTGCACAGCTaGTTCAAAAGTCCACTGCGCATCTCGCAGAGCGGG +
Preference number: 6 (lower is better)
Translates to: CLPINADILLHS*FKSPLRISQSG
Trigger: CCCGCTCTGCGAGATGCGCAGTGGACTTTTGAATCAGCTGTGCAAGAGAATATCAGCATTAATGGGCAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366976.3
ENST00000366977.8
ENST00000366978.5
ENST00000473995.5
ENST00000487995.1
ENST00000626725.1
CDS CCA 72 bp TTTGCTTTCTTTTCAGTACCATGTCAGAGGTTTTCCTaGAAGCAGTCTCTGTTGGTGTGGTTTCTATCTGTG +
Preference number: 6 (lower is better)
Translates to: FAFFSVPCQRFS*KQSLLVWFLSV
Trigger: CACAGATAGAAACCACACCAACAGAGACTGCTTCCAGGAAAACCTCTGACATGGTACTGAAAAGAAAGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366977.8