RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NSG1 (Homo sapiens)

Ensembl gene IDs: ENSG00000168824

Ensembl transcript IDs: ENST00000397958.5, ENST00000421177.6, ENST00000433139.6, ENST00000504171.1, ENST00000504347.1, ENST00000505246.5, ENST00000506380.5, ENST00000513555.5, ENST00000513829.5, ENST00000621129.4

Found 741 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGTCAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTaGAGGGCCGTCCCACCCCGACTCAGGAGTCAGCACAGGGAGGGG +
Preference number: 1 (lower is better)
Translates to: SQRGGSSQSTPSLPH*RAVPPRLRSQHREG
Trigger: CCCCTCCCTGTGCTGACTCCTGAGTCGGGGTGGGACGGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR GCA 90 bp GATGCCAGAGTCAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTaGCACATTGCAGGGCCGTCCCACCCCGACTCAGGAGTCAGCACA +
Preference number: 1 (lower is better)
Translates to: DARVRGEGVVNPHRA*HIAGPSHPDSGVST
Trigger: TGTGCTGACTCCTGAGTCGGGGTGGGACGGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTGACTCTGGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR GCA 90 bp TGGGGGCTCTTTCCTATCAGCACATCACAGAGCAGACAGACTACCTaGAGGGAGAGTTCTGCACCTCACGGGCCCAGGGCCGTCTCTTCC +
Preference number: 1 (lower is better)
Translates to: WGLFPISTSQSRQTT*RESSAPHGPRAVSS
Trigger: GGAAGAGACGGCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAGGTAGTCTGTCTGCTCTGTGATGTGCTGATAGGAAAGAGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR GCA 90 bp AGCTTAACACCACCCTTCTCAGCACACGCCTCTGATGCACACCGCTaGGCCAAGGTCACGGTCTGTGTCTCCAGACACCTTACTACAGTG +
Preference number: 1 (lower is better)
Translates to: SLTPPFSAHASDAHR*AKVTVCVSRHLTTV
Trigger: CACTGTAGTAAGGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGGTGTTAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
3UTR TCA 90 bp AGTCATTTTCCACAGCTTAACACCACCCTTCTCAGCACACGCCTCTaGTGCACACCGCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACA +
Preference number: 1 (lower is better)
Translates to: SHFPQLNTTLLSTRL*CTPLRQGHGLCLQT
Trigger: TGTCTGGAGACACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGGTGTTAAGCTGTGGAAAATGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR TCA 90 bp ACCTTACTACAGTGCACCTTGGCAGCAGTCAGCACTGTTACCCGCTaGTGGCCGAGGAAGAAATGCGAAGTAGGCTTGCTCTTAGCACAG +
Preference number: 1 (lower is better)
Translates to: TLLQCTLAAVSTVTR*WPRKKCEVGLLLAQ
Trigger: CTGTGCTAAGAGCAAGCCTACTTCGCATTTCTTCCTCGGCCATCAGCGGGTAACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
3UTR GCA 90 bp CAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTaGACTGTGCGCACACGGGCTTCACTTGTGTCTATTCAGATGCGC +
Preference number: 1 (lower is better)
Translates to: QSIKSTSTWKYRLGL*TVRTRASLVSIQMR
Trigger: GCGCATCTGAATAGACACAAGTGAAGCCCGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR TCA 90 bp TACTTACTACAGTGCACCTTGGCAGCAGTCAGCACTGTTACCCGCTaGTGGCCGAGGAAGAAATGCGAAGTAGGCTTGCTCTTAGCACAG +
Preference number: 1 (lower is better)
Translates to: YLLQCTLAAVSTVTR*WPRKKCEVGLLLAQ
Trigger: CTGTGCTAAGAGCAAGCCTACTTCGCATTTCTTCCTCGGCCATCAGCGGGTAACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR CCA 90 bp TCTTTTTCCTCGTTCTCTATGCCACTTACTTACTACAGTGCACCTTaGCAGCAGTCAGCACTGTTACCCGCTGATGGCCGAGGAAGAAAT +
Preference number: 1 (lower is better)
Translates to: SFSSFSMPLTYYSAP*QQSALLPADGRGRN
Trigger: ATTTCTTCCTCGGCCATCAGCGGGTAACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGTAAGTGGCATAGAGAACGAGGAAAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR TCA 90 bp TCTATTCAGATGCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTTaGGTCATTTTCCACAGCTTAACACCACCCTTCTCAGCACACGCC +
Preference number: 1 (lower is better)
Translates to: SIQMRREALALIYCS*VIFHSLTPPFSAHA
Trigger: GGCGTGTGCTGAGAAGGGTGGTGTTAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGCATCTGAATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR GCA 90 bp TGGTGTCAGAGCTCTTTAGGCAATGCTGAAATGCACTTGATTTTATaGCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATT +
Preference number: 1 (lower is better)
Translates to: WCQSSLGNAEMHLIL*PWVVGSKFYLQSSI
Trigger: AATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAGTGCATTTCAGCATTGCCTAAAGAGCTCTGACACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR CCA 90 bp TATTGGTGCAAATTTATTCATAATAGAAGTGAACCAGAGGGCCAGTaGGGGCTCTTTCCTATCAGCACATCACAGAGCAGACAGACTACC +
Preference number: 1 (lower is better)
Translates to: YWCKFIHNRSEPEGQ*GLFPISTSQSRQTT
Trigger: GGTAGTCTGTCTGCTCTGTGATGTGCTGATAGGAAAGAGCCCCCACTGGCCCTCTGGTTCACTTCTATTATGAATAAATTTGCACCAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR TCA 90 bp ACATTTTCTGTCTTAGAAGCACATTTCAGGAAACAAGAGTGGCGCTaGCCACGGTCACCATGCCTGTTCACAACACATCTCACACTATTT +
Preference number: 1 (lower is better)
Translates to: TFSVLEAHFRKQEWR*PRSPCLFTTHLTLF
Trigger: AAATAGTGTGAGATGTGTTGTGAACAGGCATGGTGACCGTGGTCAGCGCCACTCTTGTTTCCTGAAATGTGCTTCTAAGACAGAAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR TCA 90 bp CACCACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGAGCACTGTTACCCGCTaGTGGCCGAGGAAGAAATGC +
Preference number: 2 (lower is better)
Translates to: HHPSQHTPLMHTAAPRSRSTVTR*WPRKKC
Trigger: GCATTTCTTCCTCGGCCATCAGCGGGTAACAGTGCT...CCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR GCA 90 bp CTACCTGCAGGGAGAGTTCTGCACCTCACGGGCCCAGGGCCGTCTCTTCCCAGCATGCACTTGATTTTATaGCCGTGGGTGGTCGGCAGC +
Preference number: 2 (lower is better)
Translates to: LPAGRVLHLTGPGPSLPSMHLIL*PWVVGS
Trigger: GCTGCCGACCACCCACGGGCATAAAATCAAGTGCAT...GCTGGGAAGAGACGGCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAGGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR GCA 90 bp CTACCTGCAGGGAGAGTTCTGCACCTCACGGGCCCAGGGCCGTCTCTTCCCAGCCTCCCTCACATGCTCTaGCAGTCTACACACACTGGA +
Preference number: 2 (lower is better)
Translates to: LPAGRVLHLTGPGPSLPSLPHML*QSTHTG
Trigger: TCCAGTGTGTGTAGACTGGCAGAGCATGTGAGGGAG...GCTGGGAAGAGACGGCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAGGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR CCA 90 bp AAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGGCTGTCTCCACCCAGATaGGTGGTGCCCCTCCCTCCT +
Preference number: 2 (lower is better)
Translates to: KSTSTWKYRLGLCTVRTRLSPPR*VVPLPP
Trigger: AGGAGGGAGGGGCACCACCCATCTGGGTGGAGACAG...CCGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR GCA 90 bp CACCACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGCTATGGAGGAAGGTTTaGAGACAGCAGGGTCGGTTC +
Preference number: 2 (lower is better)
Translates to: HHPSQHTPLMHTAAPRSRLWRKV*RQQGRF
Trigger: GAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAG...CCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR GCA 90 bp AAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGGCACCCAGATGGGTGGTaGCCCTCCCTCCTTACCAAG +
Preference number: 2 (lower is better)
Translates to: KSTSTWKYRLGLCTVRTRHPDGW*PSLLTK
Trigger: CTTGGTAAGGAGGGAGGGGCACCACCCATCTGGGTG...CCGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR GCA 90 bp ACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCCTATGGAGGAAGGTTTaGAGACAGCAGGGTCGGTTC +
Preference number: 2 (lower is better)
Translates to: TPLMHTAAPRSRSVSPDTLWRKV*RQQGRF
Trigger: GAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAG...GGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR GCA 90 bp CTACCTGCAGGGAGAGTTCTGCACCTCACGGGCCCAGGGCCGTCTCTTCCCAGCTGGCCGAGGAAGAAATaGGAAGTAGGCTTGCTCTTA +
Preference number: 2 (lower is better)
Translates to: LPAGRVLHLTGPGPSLPSWPRKK*EVGLLL
Trigger: TAAGAGCAAGCCTACTTCGCATTTCTTCCTCGGCCA...GCTGGGAAGAGACGGCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAGGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR TCA 90 bp CACCACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGATGCTGAAATGCACTTaGTTTTATGCCCGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: HHPSQHTPLMHTAAPRSRMLKCT*FYARGW
Trigger: CCACCCACGGGCATAAAATCAAGTGCATTTCAGCAT...CCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR GCA 90 bp CTGTGCGCACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACCCAGATGGGTGGTaGCCCTCCCTCCTTACCAAG +
Preference number: 2 (lower is better)
Translates to: LCAHGLHLCLFRCAGKLWHPDGW*PSLLTK
Trigger: CTTGGTAAGGAGGGAGGGGCACCACCCATCTGGGTG...CCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGCGCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR TCA 90 bp CACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTATGCTGAAATGCACTTaGTTTTATGCCCGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: HPSQHTPLMHTAAPRSRSMLKCT*FYARGW
Trigger: CCACCCACGGGCATAAAATCAAGTGCATTTCAGCAT...AGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR GCA 90 bp CTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGGGCTTCACTTGTGTCCTATGGAGGAAGGTTTaGAGACAGCAGGGTCGGTTC +
Preference number: 2 (lower is better)
Translates to: LEIQARPLHCAHTGFTCVLWRKV*RQQGRF
Trigger: GAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAG...GACACAAGTGAAGCCCGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR GCA 90 bp CACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTTGGCCGAGGAAGAAATaGGAAGTAGGCTTGCTCTTA +
Preference number: 2 (lower is better)
Translates to: HPSQHTPLMHTAAPRSRSWPRKK*EVGLLL
Trigger: TAAGAGCAAGCCTACTTCGCATTTCTTCCTCGGCCA...AGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR GCA 90 bp TTCTGTCTTAGAAGCACATTTCAGGAAACAAGAGTGGCGCTGACCACGGTCACCCTGCAGGGAGAGTTCTaGACCTCACGGGCCCAGGGC +
Preference number: 2 (lower is better)
Translates to: FCLRSTFQETRVALTTVTLQGEF*TSRAQG
Trigger: GCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAG...GGTGACCGTGGTCAGCGCCACTCTTGTTTCCTGAAATGTGCTTCTAAGACAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR CCA 90 bp CAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCTGTCTCCACCCAGATaGGTGGTGCCCCTCCCTCCT +
Preference number: 2 (lower is better)
Translates to: QSIKSTSTWKYRLGLCTVLSPPR*VVPLPP
Trigger: AGGAGGGAGGGGCACCACCCATCTGGGTGGAGACAG...CACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR TCA 90 bp TGCGCACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACAGCACTGTTACCCGCTaGTGGCCGAGGAAGAAATGC +
Preference number: 2 (lower is better)
Translates to: CAHGLHLCLFRCAGKLWHSTVTR*WPRKKC
Trigger: GCATTTCTTCCTCGGCCATCAGCGGGTAACAGTGCT...GTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR TCA 90 bp ACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTGATTCTCAGCACACGCCTCTaGTGCACACCGCTGCGCCAA +
Preference number: 2 (lower is better)
Translates to: TRASLVSIQMRREALALILSTRL*CTPLRQ
Trigger: TTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAG...AATCAGTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR GCA 90 bp GCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCTTACTACAGTGCACCTTGCTATGGAGGAAGGTTTaGAGACAGCAGGGTCGGTTC +
Preference number: 2 (lower is better)
Translates to: AAPRSRSVSPDTLLQCTLLWRKV*RQQGRF
Trigger: GAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAG...CAAGGTGCACTGTAGTAAGGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR CCA 90 bp CAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCGTCTTTTATGCCCGTGGGTaGTCGGCAGCAAGTTTTATT +
Preference number: 2 (lower is better)
Translates to: QRGGSSQSTPSLPHCRAVFYARG*SAASFI
Trigger: AATAAAACTTGCTGCCGACCACCCACGGGCATAAAA...GACGGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR TCA 90 bp AGCAGACAGACTACCTGCAGGGAGAGTTCTGCACCTCACGGGCCCAGGGCCGTCATGAAGATCTTAACATaGAAAGTGGTGTCAGAGCTC +
Preference number: 2 (lower is better)
Translates to: SRQTTCRESSAPHGPRAVMKILT*KVVSEL
Trigger: GAGCTCTGACACCACTTTTCATGTTAAGATCTTCAT...GACGGCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAGGTAGTCTGTCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR TCA 90 bp CCACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCCAAAATGCATTTATCTaGGATCCAAACCCTTCGCAT +
Preference number: 2 (lower is better)
Translates to: PPFSAHASDAHRCAKVTVQNAFI*DPNPSH
Trigger: ATGCGAAGGGTTTGGATCTCAGATAAATGCATTTTG...GACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR TCA 90 bp CACCACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGCAAAATGCATTTATCTaGGATCCAAACCCTTCGCAT +
Preference number: 2 (lower is better)
Translates to: HHPSQHTPLMHTAAPRSRQNAFI*DPNPSH
Trigger: ATGCGAAGGGTTTGGATCTCAGATAAATGCATTTTG...CCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR GCA 90 bp ACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTGATTAATCCACACCGAGCCTaGCACATTGCAGGGCCGTCC +
Preference number: 2 (lower is better)
Translates to: TRASLVSIQMRREALALINPHRA*HIAGPS
Trigger: GGACGGCCCTGCAATGTGGCAGGCTCGGTGTGGATT...AATCAGTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR CCA 90 bp CTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGGGCTTCACTTGTGTCTACTACAGTGCACCTTaGCAGCAGTCAGCACTGTTA +
Preference number: 2 (lower is better)
Translates to: LEIQARPLHCAHTGFTCVYYSAP*QQSALL
Trigger: TAACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTA...GACACAAGTGAAGCCCGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR TCA 90 bp CCACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCCTCTTTAGGCAATGCTaGAATGCACTTGATTTTATG +
Preference number: 2 (lower is better)
Translates to: PPFSAHASDAHRCAKVTVLFRQC*NALDFM
Trigger: CATAAAATCAAGTGCATTTCAGCATTGCCTAAAGAG...GACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR TCA 90 bp CACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTATGAAGATCTTAACATaGAAAGTGGTGTCAGAGCTC +
Preference number: 2 (lower is better)
Translates to: HPSQHTPLMHTAAPRSRSMKILT*KVVSEL
Trigger: GAGCTCTGACACCACTTTTCATGTTAAGATCTTCAT...AGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR TCA 90 bp ACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCCAAAATGCATTTATCTaGGATCCAAACCCTTCGCAT +
Preference number: 2 (lower is better)
Translates to: TPLMHTAAPRSRSVSPDTQNAFI*DPNPSH
Trigger: ATGCGAAGGGTTTGGATCTCAGATAAATGCATTTTG...GGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR TCA 90 bp CTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGGGCTTCACTTGTGTCGGGAAGCTTTGGCACTaGTTTATTGCTCTTGAGTCA +
Preference number: 2 (lower is better)
Translates to: LEIQARPLHCAHTGFTCVGKLWH*FIALES
Trigger: TGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCC...GACACAAGTGAAGCCCGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR GCA 90 bp AGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTAACACCACCCCGAGCCTGCCACATTaGAGGGCCGTCCCACCCCGA +
Preference number: 2 (lower is better)
Translates to: SFGTDLLLLSHFPQLNTTPSLPH*RAVPPR
Trigger: TCGGGGTGGGACGGCCCTGCAATGTGGCAGGCTCGG...GGTGGTGTTAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR TCA 90 bp CTGTGCGCACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGATGCTGAAATGCACTTaGTTTTATGCCCGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: LCAHGLHLCLFRCAGKLWMLKCT*FYARGW
Trigger: CCACCCACGGGCATAAAATCAAGTGCATTTCAGCAT...CCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGCGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR GCA 90 bp TGTGTCTCCAGACACCTTACTACAGTGCACCTTGGCAGCAGTCAGCACTGTTACATGCACTTGATTTTATaGCCGTGGGTGGTCGGCAGC +
Preference number: 2 (lower is better)
Translates to: CVSRHLTTVHLGSSQHCYMHLIL*PWVVGS
Trigger: GCTGCCGACCACCCACGGGCATAAAATCAAGTGCAT...GTAACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGGTGTCTGGAGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR GCA 90 bp TTCTGTCTTAGAAGCACATTTCAGGAAACAAGAGTGGCGCTGACCACGGTCACCGCCCTCTCCCTCACATaGTCTGCCAGTCTACACACA +
Preference number: 2 (lower is better)
Translates to: FCLRSTFQETRVALTTVTALSLT*SASLHT
Trigger: TGTGTGTAGACTGGCAGAGCATGTGAGGGAGAGGGC...GGTGACCGTGGTCAGCGCCACTCTTGTTTCCTGAAATGTGCTTCTAAGACAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR TCA 90 bp ATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACAATGCTGAAATGCACTTaGTTTTATGCCCGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: IKSTSTWKYRLGLCTVRTMLKCT*FYARGW
Trigger: CCACCCACGGGCATAAAATCAAGTGCATTTCAGCAT...TGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR GCA 90 bp ATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACAACTTACTTACTACAGTaGACCTTGGCAGCAGTCAGC +
Preference number: 2 (lower is better)
Translates to: IKSTSTWKYRLGLCTVRTTYLLQ*TLAAVS
Trigger: GCTGACTGCTGCCAAGGTGCACTGTAGTAAGTAAGT...TGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR CCA 90 bp TGCGCACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTTTTATGCCCGTGGGTaGTCGGCAGCAAGTTTTATT +
Preference number: 2 (lower is better)
Translates to: CAHGLHLCLFRCAGKLWHFYARG*SAASFI
Trigger: AATAAAACTTGCTGCCGACCACCCACGGGCATAAAA...GTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR TCA 90 bp AAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGGCTCTTTAGGCAATGCTaGAATGCACTTGATTTTATG +
Preference number: 2 (lower is better)
Translates to: KSTSTWKYRLGLCTVRTRLFRQC*NALDFM
Trigger: CATAAAATCAAGTGCATTTCAGCATTGCCTAAAGAG...CCGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR TCA 90 bp GATGCACACCGCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCTTACTACACAAAATGCATTTATCTaGGATCCAAACCCTTCGCAT +
Preference number: 2 (lower is better)
Translates to: DAHRCAKVTVCVSRHLTTQNAFI*DPNPSH
Trigger: ATGCGAAGGGTTTGGATCTCAGATAAATGCATTTTG...TGTAGTAAGGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCGGTGTGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR TCA 90 bp ATGAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCAGCACTGTTACCCGCTaGTGGCCGAGGAAGAAATGC +
Preference number: 2 (lower is better)
Translates to: MNSQSIKSTSTWKYRLGLSTVTR*WPRKKC
Trigger: GCATTTCTTCCTCGGCCATCAGCGGGTAACAGTGCT...GAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR GCA 90 bp GCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACAATGCACTTGATTTTATaGCCGTGGGTGGTCGGCAGC +
Preference number: 2 (lower is better)
Translates to: AMEEGLQTAGSVQKINSTMHLIL*PWVVGS
Trigger: GCTGCCGACCACCCACGGGCATAAAATCAAGTGCAT...TGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR TCA 90 bp TGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTTGAGTAGCACTGTTACCCGCTaGTGGCCGAGGAAGAAATGC +
Preference number: 2 (lower is better)
Translates to: CVYSDAQGSFGTDLLLLSSTVTR*WPRKKC
Trigger: GCATTTCTTCCTCGGCCATCAGCGGGTAACAGTGCT...ACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGCATCTGAATAGACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR GCA 90 bp AGGAAGAAATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGCACTTGATTTTATaGCCGTGGGTGGTCGGCAGC +
Preference number: 2 (lower is better)
Translates to: RKKCEVGLLLAQREITLDMHLIL*PWVVGS
Trigger: GCTGCCGACCACCCACGGGCATAAAATCAAGTGCAT...ATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTTCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR CAA 90 bp GTCTATTCAGATGCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTaGAGTCATTTTCCACAGCTTAACACCACCCTTCTCAGCACACGC +
Preference number: 2 (lower is better)
Translates to: VYSDAQGSFGTDLLL*SHFPQLNTTLLSTR
Trigger: GCGTGTGCTGAGAAGGGTGGTGTTAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGCATCTGAATAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR TCA 90 bp CTGTGCGCACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCAATTGCACCGTAAATaGGTAACCTCTAAAGTATCA +
Preference number: 2 (lower is better)
Translates to: LCAHGLHLCLFRCAGKLWQLHRK*VTSKVS
Trigger: TGATACTTTAGAGGTTACTCATTTACGGTGCAATTG...CCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGCGCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR TCA 90 bp TGCGCACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACCTCTTTAGGCAATGCTaGAATGCACTTGATTTTATG +
Preference number: 2 (lower is better)
Translates to: CAHGLHLCLFRCAGKLWHLFRQC*NALDFM
Trigger: CATAAAATCAAGTGCATTTCAGCATTGCCTAAAGAG...GTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR TCA 90 bp ATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACAAAATGCATTTATCTaGGATCCAAACCCTTCGCAT +
Preference number: 2 (lower is better)
Translates to: IKSTSTWKYRLGLCTVRTQNAFI*DPNPSH
Trigger: ATGCGAAGGGTTTGGATCTCAGATAAATGCATTTTG...TGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR GCA 90 bp GAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGTGGCCGAGGAAGAAATaGGAAGTAGGCTTGCTCTTA +
Preference number: 2 (lower is better)
Translates to: EFTVNKVHVYLEIQARPLWPRKK*EVGLLL
Trigger: TAAGAGCAAGCCTACTTCGCATTTCTTCCTCGGCCA...CAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR GCA 90 bp ACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTGATTATTTGTCATTTTGTTTaGACGGTGCCACACCAGTCC +
Preference number: 2 (lower is better)
Translates to: TRASLVSIQMRREALALIICHFV*TVPHQS
Trigger: GGACTGGTGTGGCACCGTGCAAACAAAATGACAAAT...AATCAGTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR TCA 90 bp AGATATGGCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAAATGCTGAAATGCACTTaGTTTTATGCCCGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: RYGYGGRFADSRVGSENQMLKCT*FYARGW
Trigger: CCACCCACGGGCATAAAATCAAGTGCATTTCAGCAT...TTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGCCATATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR GCA 90 bp GGAAGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTAACACCCTATGGAGGAAGGTTTaGAGACAGCAGGGTCGGTTC +
Preference number: 2 (lower is better)
Translates to: GSFGTDLLLLSHFPQLNTLWRKV*RQQGRF
Trigger: GAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAG...GGTGTTAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR GCA 90 bp TTCTCTATGCCACTTACTTACTACAGTGCACCTTGGCAGCAGTCAGCACTGTTATGGCCGAGGAAGAAATaGGAAGTAGGCTTGCTCTTA +
Preference number: 2 (lower is better)
Translates to: FSMPLTYYSAPWQQSALLWPRKK*EVGLLL
Trigger: TAAGAGCAAGCCTACTTCGCATTTCTTCCTCGGCCA...TAACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGTAAGTGGCATAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR GCA 90 bp AGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTAACACCACCCTCCCTCACATGCTCTaGCAGTCTACACACACTGGA +
Preference number: 2 (lower is better)
Translates to: SFGTDLLLLSHFPQLNTTLPHML*QSTHTG
Trigger: TCCAGTGTGTGTAGACTGGCAGAGCATGTGAGGGAG...GGTGGTGTTAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR CCA 90 bp AGGAAGAAATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATTTGATTTTATGCCCGTaGGTGGTCGGCAGCAAGTTT +
Preference number: 2 (lower is better)
Translates to: RKKCEVGLLLAQREITLDLILCP*VVGSKF
Trigger: AAACTTGCTGCCGACCACCCACGGGCATAAAATCAA...ATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTTCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR CAA 90 bp TTAGCACAGCGAGAGATCACTCTAGATATGGCTATGGAGGAAGGTTaGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACAAAATGC +
Preference number: 2 (lower is better)
Translates to: LAQREITLDMAMEEG*QTAGSVQKINSTKC
Trigger: GCATTTTGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR CAA 90 bp ACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTGATTTATaGCTCTTGAGTCATTTTCCACAGCTTAACACCACCCTTCTCAGC +
Preference number: 2 (lower is better)
Translates to: TCVYSDAQGSFGTDL*LLSHFPQLNTTLLS
Trigger: GCTGAGAAGGGTGGTGTTAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR TCA 90 bp TGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTTGAGTATGCTGAAATGCACTTaGTTTTATGCCCGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: CVYSDAQGSFGTDLLLLSMLKCT*FYARGW
Trigger: CCACCCACGGGCATAAAATCAAGTGCATTTCAGCAT...ACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGCATCTGAATAGACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR CCA 90 bp AGGAAGAAATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATTTTTATGCCCGTGGGTaGTCGGCAGCAAGTTTTATT +
Preference number: 2 (lower is better)
Translates to: RKKCEVGLLLAQREITLDFYARG*SAASFI
Trigger: AATAAAACTTGCTGCCGACCACCCACGGGCATAAAA...ATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTTCTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR CCA 90 bp GCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTTTTTATGCCCGTGGGTaGTCGGCAGCAAGTTTTATT +
Preference number: 2 (lower is better)
Translates to: AQGSFGTDLLLLSHFPQLFYARG*SAASFI
Trigger: AATAAAACTTGCTGCCGACCACCCACGGGCATAAAA...AAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR TCA 90 bp ACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTGATTCAATTGCACCGTAAATaGGTAACCTCTAAAGTATCA +
Preference number: 2 (lower is better)
Translates to: TRASLVSIQMRREALALIQLHRK*VTSKVS
Trigger: TGATACTTTAGAGGTTACTCATTTACGGTGCAATTG...AATCAGTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR TCA 90 bp CTAGATATGGCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCATGAAGATCTTAACATaGAAAGTGGTGTCAGAGCTC +
Preference number: 2 (lower is better)
Translates to: LDMAMEEGLQTAGSVQKIMKILT*KVVSEL
Trigger: GAGCTCTGACACCACTTTTCATGTTAAGATCTTCAT...GATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGCCATATCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR GCA 90 bp ATCCCAGTAAAGGAGCTAAATGAAGATCTTAACATGAAAAGTGGTGTCAGAGCTATGCACTTGATTTTATaGCCGTGGGTGGTCGGCAGC +
Preference number: 2 (lower is better)
Translates to: IPVKELNEDLNMKSGVRAMHLIL*PWVVGS
Trigger: GCTGCCGACCACCCACGGGCATAAAATCAAGTGCAT...AGCTCTGACACCACTTTTCATGTTAAGATCTTCATTTAGCTCCTTTACTGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR TCA 90 bp CACTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCCAATTGCACCGTAAATaGGTAACCTCTAAAGTATCA +
Preference number: 2 (lower is better)
Translates to: HLILCPWVVGSKFYLQSSQLHRK*VTSKVS
Trigger: TGATACTTTAGAGGTTACTCATTTACGGTGCAATTG...GCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR TCA 90 bp CTTTTTCCTCGTTCTCTATGCCACTTACTTACTACAGTGCACCTTGGCAGCAGTATGAAGATCTTAACATaGAAAGTGGTGTCAGAGCTC +
Preference number: 2 (lower is better)
Translates to: LFPRSLCHLLTTVHLGSSMKILT*KVVSEL
Trigger: GAGCTCTGACACCACTTTTCATGTTAAGATCTTCAT...ACTGCTGCCAAGGTGCACTGTAGTAAGTAAGTGGCATAGAGAACGAGGAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR GCA 90 bp AGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTAACACCACCATTTGTCATTTTGTTTaGACGGTGCCACACCAGTCC +
Preference number: 2 (lower is better)
Translates to: SFGTDLLLLSHFPQLNTTICHFV*TVPHQS
Trigger: GGACTGGTGTGGCACCGTGCAAACAAAATGACAAAT...GGTGGTGTTAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR TCA 90 bp TTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATGGAGGAAGGTTTGCTCTTTAGGCAATGCTaGAATGCACTTGATTTTATG +
Preference number: 2 (lower is better)
Translates to: LLLAQREITLDMAMEEGLLFRQC*NALDFM
Trigger: CATAAAATCAAGTGCATTTCAGCATTGCCTAAAGAG...CAAACCTTCCTCCATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR TCA 90 bp TTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATTCAATTGCACCGTAAATaGGTAACCTCTAAAGTATCA +
Preference number: 2 (lower is better)
Translates to: LILCPWVVGSKFYLQSSIQLHRK*VTSKVS
Trigger: TGATACTTTAGAGGTTACTCATTTACGGTGCAATTG...AATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR TCA 90 bp TATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACAAACTCTTTAGGCAATGCTaGAATGCACTTGATTTTATG +
Preference number: 2 (lower is better)
Translates to: YGGRFADSRVGSENQFHKLFRQC*NALDFM
Trigger: CATAAAATCAAGTGCATTTCAGCATTGCCTAAAGAG...TTTGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR TCA 90 bp ACTAATGGGGCTATTGGTGCAAATTTATTCATAATAGAAGTGAACCAGAGGGCCCAAAATGCATTTATCTaGGATCCAAACCCTTCGCAT +
Preference number: 2 (lower is better)
Translates to: TNGAIGANLFIIEVNQRAQNAFI*DPNPSH
Trigger: ATGCGAAGGGTTTGGATCTCAGATAAATGCATTTTG...GGCCCTCTGGTTCACTTCTATTATGAATAAATTTGCACCAATAGCCCCATTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR TCA 90 bp ATCCCAGTAAAGGAGCTAAATGAAGATCTTAACATGAAAAGTGGTGTCAGAGCTCAATTGCACCGTAAATaGGTAACCTCTAAAGTATCA +
Preference number: 2 (lower is better)
Translates to: IPVKELNEDLNMKSGVRAQLHRK*VTSKVS
Trigger: TGATACTTTAGAGGTTACTCATTTACGGTGCAATTG...AGCTCTGACACCACTTTTCATGTTAAGATCTTCATTTAGCTCCTTTACTGGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR GCA 72 bp GGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTaGAGGGCCGTCCCACCCCGACTCAGGAGTCAGCAC +
Preference number: 3 (lower is better)
Translates to: GGSSQSTPSLPH*RAVPPRLRSQH
Trigger: GTGCTGACTCCTGAGTCGGGGTGGGACGGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR GCA 72 bp GTCAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTaGCACATTGCAGGGCCGTCCCACCCCGACTCAGGA +
Preference number: 3 (lower is better)
Translates to: VRGEGVVNPHRA*HIAGPSHPDSG
Trigger: TCCTGAGTCGGGGTGGGACGGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR GCA 72 bp ATCACAGAGCAGACAGACTACCTGCAGGGAGAGTTCTaGACCTCACGGGCCCAGGGCCGTCTCTTCCCAGCC +
Preference number: 3 (lower is better)
Translates to: ITEQTDYLQGEF*TSRAQGRLFPA
Trigger: GGCTGGGAAGAGACGGCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAGGTAGTCTGTCTGCTCTGTGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR GCA 72 bp CCACCCTTCTCAGCACACGCCTCTGATGCACACCGCTaGGCCAAGGTCACGGTCTGTGTCTCCAGACACCCT +
Preference number: 3 (lower is better)
Translates to: PPFSAHASDAHR*AKVTVCVSRHP
Trigger: AGGGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR GCA 72 bp CCACCCTTCTCAGCACACGCCTCTGATGCACACCGCTaGGCCAAGGTCACGGTCTGTGTCTCCAGACACCTT +
Preference number: 3 (lower is better)
Translates to: PPFSAHASDAHR*AKVTVCVSRHL
Trigger: AAGGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR CAA 90 bp CCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGGCTATGGAGGAAGGTTaGCAGACAGCAGGGTCGGTT +
Preference number: 3 (lower is better)
Translates to: PSQHTPLMHTAAPRSRSVAMEEG*QTAGSV
Trigger: AACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGC...CACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR TCA 72 bp CCACAGCTTAACACCACCCTTCTCAGCACACGCCTCTaGTGCACACCGCTGCGCCAAGGTCACGGTCTGTGT +
Preference number: 3 (lower is better)
Translates to: PQLNTTLLSTRL*CTPLRQGHGLC
Trigger: ACACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGGTGTTAAGCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR CAA 90 bp CACCACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTTACTACAGTGCACCTaGGCAGCAGTCAGCACTGTT +
Preference number: 3 (lower is better)
Translates to: HHPSQHTPLMHTAAPRSRLLQCT*AAVSTV
Trigger: AACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTAA...CCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR CAA 90 bp CAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCGTCAAATGCGAAGTAGGCTaGCTCTTAGCACAGCGAGAG +
Preference number: 3 (lower is better)
Translates to: QRGGSSQSTPSLPHCRAVKCEVG*LLAQRE
Trigger: CTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTT...GACGGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR GCA 72 bp TTTCCTATCAGCACATCACAGAGCAGACAGACTACCTaGAGGGAGAGTTCTGCACCTCACGGGCCCAGGGCC +
Preference number: 3 (lower is better)
Translates to: FPISTSQSRQTT*RESSAPHGPRA
Trigger: GGCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAGGTAGTCTGTCTGCTCTGTGATGTGCTGATAGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR CAA 90 bp AGTCAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCAAATGCGAAGTAGGCTaGCTCTTAGCACAGCGAGAG +
Preference number: 3 (lower is better)
Translates to: SQRGGSSQSTPSLPHCRAKCEVG*LLAQRE
Trigger: CTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTT...GGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR TCA 72 bp CAGTGCACCTTGGCAGCAGTCAGCACTGTTACCCGCTaGTGGCCGAGGAAGAAATGCGAAGTAGGCTTGCTC +
Preference number: 3 (lower is better)
Translates to: QCTLAAVSTVTR*WPRKKCEVGLL
Trigger: GAGCAAGCCTACTTCGCATTTCTTCCTCGGCCATCAGCGGGTAACAGTGCTGACTGCTGCCAAGGTGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR CAA 90 bp ACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCAATGCTGAAATGCACTaGATTTTATGCCCGTGGGTG +
Preference number: 3 (lower is better)
Translates to: TPLMHTAAPRSRSVSPDTNAEMH*ILCPWV
Trigger: CACCCACGGGCATAAAATCAAGTGCATTTCAGCATT...GGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR CAA 90 bp ACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCTCCCTCAAAGTCCCTTaGTTATTTGCAAGTGACACA +
Preference number: 3 (lower is better)
Translates to: TPLMHTAAPRSRSVSPDTSLKVP*LFASDT
Trigger: TGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGA...GGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR CAA 90 bp AGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTAACACCACCACCGAGCCTGCCACATaGCAGGGCCGTCCCACCCCG +
Preference number: 3 (lower is better)
Translates to: SFGTDLLLLSHFPQLNTTTEPAT*QGRPTP
Trigger: CGGGGTGGGACGGCCCTGCAATGTGGCAGGCTCGGT...GGTGGTGTTAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR CAA 90 bp CACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGGCAGCAAGTTTTATTaGCAAAGCAGCATTAGCAAA +
Preference number: 3 (lower is better)
Translates to: HPSQHTPLMHTAAPRSRSGSKFY*QSSISK
Trigger: TTTGCTAATGCTGCTTTGCAAATAAAACTTGCTGCC...AGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR CAA 90 bp ACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCGGCAGCAAGTTTTATTaGCAAAGCAGCATTAGCAAA +
Preference number: 3 (lower is better)
Translates to: TPLMHTAAPRSRSVSPDTGSKFY*QSSISK
Trigger: TTTGCTAATGCTGCTTTGCAAATAAAACTTGCTGCC...GGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR CAA 90 bp CCGCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCTTACTACAGTGCACCTTCCCTCAAAGTCCCTTaGTTATTTGCAAGTGACACA +
Preference number: 3 (lower is better)
Translates to: PLRQGHGLCLQTPYYSAPSLKVP*LFASDT
Trigger: TGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGA...AGGTGCACTGTAGTAAGGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR CAA 90 bp CTCGTTCTCTATGCCACTTACTTACTACAGTGCACCTTGGCAGCAGTCAGCACTGCTATGGAGGAAGGTTaGCAGACAGCAGGGTCGGTT +
Preference number: 3 (lower is better)
Translates to: LVLYATYLLQCTLAAVSTAMEEG*QTAGSV
Trigger: AACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGC...AGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGTAAGTGGCATAGAGAACGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR CAA 90 bp CCGCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCTTACTACAGTGCACCTGGCAGCAAGTTTTATTaGCAAAGCAGCATTAGCAAA +
Preference number: 3 (lower is better)
Translates to: PLRQGHGLCLQTPYYSAPGSKFY*QSSISK
Trigger: TTTGCTAATGCTGCTTTGCAAATAAAACTTGCTGCC...AGGTGCACTGTAGTAAGGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR CAA 90 bp GGTCTGTGTCTCCAGACACCTTACTACAGTGCACCTTGGCAGCAGTCAGCACTGAATGCTGAAATGCACTaGATTTTATGCCCGTGGGTG +
Preference number: 3 (lower is better)
Translates to: GLCLQTPYYSAPWQQSALNAEMH*ILCPWV
Trigger: CACCCACGGGCATAAAATCAAGTGCATTTCAGCATT...CAGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGGTGTCTGGAGACACAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR CAA 90 bp GAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGGCTATGGAGGAAGGTTaGCAGACAGCAGGGTCGGTT +
Preference number: 3 (lower is better)
Translates to: EFTVNKVHVYLEIQARPLAMEEG*QTAGSV
Trigger: AACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGC...CAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR CAA 90 bp ACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTGATTTTACTACAGTGCACCTaGGCAGCAGTCAGCACTGTT +
Preference number: 3 (lower is better)
Translates to: TRASLVSIQMRREALALILLQCT*AAVSTV
Trigger: AACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTAA...AATCAGTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR CAA 90 bp CTGTGCGCACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGTTGAAATTTGTCATTTaGTTTGCACGGTGCCACACC +
Preference number: 3 (lower is better)
Translates to: LCAHGLHLCLFRCAGKLWLKFVI*FARCHT
Trigger: GGTGTGGCACCGTGCAAACAAAATGACAAATTTCAA...CCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGCGCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR CAA 90 bp AAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGTGTCTCCAGACACCCTaGATGAGAAAATACATTTTC +
Preference number: 3 (lower is better)
Translates to: KVHVYLEIQARPLHCAHTCLQTP*MRKYIF
Trigger: GAAAATGTATTTTCTCATCAAGGGTGTCTGGAGACA...CGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR CAA 90 bp CAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGATGCGCAGGGAAGCTTaGGCACTGATTTATTGCTCT +
Preference number: 3 (lower is better)
Translates to: QSIKSTSTWKYRLGLCTVMRREA*ALIYCS
Trigger: AGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGCAT...CACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR TCA 72 bp GTCTTAGAAGCACATTTCAGGAAACAAGAGTGGCGCTaGCCACGGTCACCATGCCTGTTCACAACACATCTC +
Preference number: 3 (lower is better)
Translates to: VLEAHFRKQEWR*PRSPCLFTTHL
Trigger: GAGATGTGTTGTGAACAGGCATGGTGACCGTGGTCAGCGCCACTCTTGTTTCCTGAAATGTGCTTCTAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR CAA 90 bp TGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTTGAGTGCTATGGAGGAAGGTTaGCAGACAGCAGGGTCGGTT +
Preference number: 3 (lower is better)
Translates to: CVYSDAQGSFGTDLLLLSAMEEG*QTAGSV
Trigger: AACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGC...ACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGCATCTGAATAGACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR CAA 90 bp GAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGTTACTACAGTGCACCTaGGCAGCAGTCAGCACTGTT +
Preference number: 3 (lower is better)
Translates to: EFTVNKVHVYLEIQARPLLLQCT*AAVSTV
Trigger: AACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTAA...CAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR CAA 90 bp CACGGTCTGTGTCTCCAGACACCTTACTACAGTGCACCTTGGCAGCAGTCAGCAAAGTCCCTTTGTTATTaGCAAGTGACACATTGTAAG +
Preference number: 3 (lower is better)
Translates to: HGLCLQTPYYSAPWQQSAKSLCY*QVTHCK
Trigger: CTTACAATGTGTCACTTGCAAATAACAAAGGGACTT...TGCTGACTGCTGCCAAGGTGCACTGTAGTAAGGTGTCTGGAGACACAGACCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR CAA 90 bp CAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGTTGAAATTTGTCATTTaGTTTGCACGGTGCCACACC +
Preference number: 3 (lower is better)
Translates to: QSIKSTSTWKYRLGLCTVLKFVI*FARCHT
Trigger: GGTGTGGCACCGTGCAAACAAAATGACAAATTTCAA...CACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR CAA 90 bp GAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGAATGCTGAAATGCACTaGATTTTATGCCCGTGGGTG +
Preference number: 3 (lower is better)
Translates to: EFTVNKVHVYLEIQARPLNAEMH*ILCPWV
Trigger: CACCCACGGGCATAAAATCAAGTGCATTTCAGCATT...CAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR CAA 90 bp CTAGATATGGCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATGCTGAAATGCACTaGATTTTATGCCCGTGGGTG +
Preference number: 3 (lower is better)
Translates to: LDMAMEEGLQTAGSVQKINAEMH*ILCPWV
Trigger: CACCCACGGGCATAAAATCAAGTGCATTTCAGCATT...GATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGCCATATCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR CAA 90 bp CTCGTTCTCTATGCCACTTACTTACTACAGTGCACCTTGGCAGCAGTCAGCACTGGCAGCAAGTTTTATTaGCAAAGCAGCATTAGCAAA +
Preference number: 3 (lower is better)
Translates to: LVLYATYLLQCTLAAVSTGSKFY*QSSISK
Trigger: TTTGCTAATGCTGCTTTGCAAATAAAACTTGCTGCC...AGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGTAAGTGGCATAGAGAACGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR CAA 90 bp GCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTAATGCTGAAATGCACTaGATTTTATGCCCGTGGGTG +
Preference number: 3 (lower is better)
Translates to: AQGSFGTDLLLLSHFPQLNAEMH*ILCPWV
Trigger: CACCCACGGGCATAAAATCAAGTGCATTTCAGCATT...AAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR TCA 72 bp ATGCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTTaGGTCATTTTCCACAGCTTAACACCACCCTTCTCA +
Preference number: 3 (lower is better)
Translates to: MRREALALIYCS*VIFHSLTPPFS
Trigger: TGAGAAGGGTGGTGTTAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR GCA 72 bp TTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTaGAAAGCAGCATTAGCAAACAGAAGCAATTGCACC +
Preference number: 3 (lower is better)
Translates to: FYARGWSAASFI*KAALANRSNCT
Trigger: GGTGCAATTGCTTCTGTTTGCTAATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR CAA 90 bp CTTTTTCCTCGTTCTCTATGCCACTTACTTACTACAGTGCACCTTGGCAGCAGTTCCCTCAAAGTCCCTTaGTTATTTGCAAGTGACACA +
Preference number: 3 (lower is better)
Translates to: LFPRSLCHLLTTVHLGSSSLKVP*LFASDT
Trigger: TGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGA...ACTGCTGCCAAGGTGCACTGTAGTAAGTAAGTGGCATAGAGAACGAGGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR CAA 90 bp ATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATTCCCTCAAAGTCCCTTaGTTATTTGCAAGTGACACA +
Preference number: 3 (lower is better)
Translates to: MRSRLALSTARDHSRYGYSLKVP*LFASDT
Trigger: TGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGA...ATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR CAA 90 bp TGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTTGAGTAATGCTGAAATGCACTaGATTTTATGCCCGTGGGTG +
Preference number: 3 (lower is better)
Translates to: CVYSDAQGSFGTDLLLLSNAEMH*ILCPWV
Trigger: CACCCACGGGCATAAAATCAAGTGCATTTCAGCATT...ACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGCATCTGAATAGACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR CAA 90 bp GAAGAAATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATAATGCTGAAATGCACTaGATTTTATGCCCGTGGGTG +
Preference number: 3 (lower is better)
Translates to: EEMRSRLALSTARDHSRYNAEMH*ILCPWV
Trigger: CACCCACGGGCATAAAATCAAGTGCATTTCAGCATT...ATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR GCA 72 bp AGCTCTTTAGGCAATGCTGAAATGCACTTGATTTTATaGCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAA +
Preference number: 3 (lower is better)
Translates to: SSLGNAEMHLIL*PWVVGSKFYLQ
Trigger: TTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAGTGCATTTCAGCATTGCCTAAAGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR CCA 72 bp AAATTTATTCATAATAGAAGTGAACCAGAGGGCCAGTaGGGGCTCTTTCCTATCAGCACATCACAGAGCAGA +
Preference number: 3 (lower is better)
Translates to: KFIHNRSEPEGQ*GLFPISTSQSR
Trigger: TCTGCTCTGTGATGTGCTGATAGGAAAGAGCCCCCACTGGCCCTCTGGTTCACTTCTATTATGAATAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR CAA 90 bp ATGAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCGGCAGCAAGTTTTATTaGCAAAGCAGCATTAGCAAA +
Preference number: 3 (lower is better)
Translates to: MNSQSIKSTSTWKYRLGLGSKFY*QSSISK
Trigger: TTTGCTAATGCTGCTTTGCAAATAAAACTTGCTGCC...GAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR CAA 90 bp GAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGTTTGGCACTGATTTATaGCTCTTGAGTCATTTTCCA +
Preference number: 3 (lower is better)
Translates to: EFTVNKVHVYLEIQARPLFGTDL*LLSHFP
Trigger: TGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAA...CAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR CAA 90 bp GAAGAAATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATAAGTCCCTTTGTTATTaGCAAGTGACACATTGTAAG +
Preference number: 3 (lower is better)
Translates to: EEMRSRLALSTARDHSRYKSLCY*QVTHCK
Trigger: CTTACAATGTGTCACTTGCAAATAACAAAGGGACTT...ATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTTCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR CAA 90 bp TTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATTAAGTCCCTTTGTTATTaGCAAGTGACACATTGTAAG +
Preference number: 3 (lower is better)
Translates to: LILCPWVVGSKFYLQSSIKSLCY*QVTHCK
Trigger: CTTACAATGTGTCACTTGCAAATAACAAAGGGACTT...AATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR CAA 90 bp ACTAATGGGGCTATTGGTGCAAATTTATTCATAATAGAAGTGAACCAGAGGGCCTCCCTCAAAGTCCCTTaGTTATTTGCAAGTGACACA +
Preference number: 3 (lower is better)
Translates to: TNGAIGANLFIIEVNQRASLKVP*LFASDT
Trigger: TGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGA...GGCCCTCTGGTTCACTTCTATTATGAATAAATTTGCACCAATAGCCCCATTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
3UTR-3UTR CAA 90 bp AGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTAACACCACCAAGTCCCTTTGTTATTaGCAAGTGACACATTGTAAG +
Preference number: 3 (lower is better)
Translates to: SFGTDLLLLSHFPQLNTTKSLCY*QVTHCK
Trigger: CTTACAATGTGTCACTTGCAAATAACAAAGGGACTT...GGTGGTGTTAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR-3UTR CAA 90 bp ATCCCAGTAAAGGAGCTAAATGAAGATCTTAACATGAAAAGTGGTGTCAGAGCTAAGTCCCTTTGTTATTaGCAAGTGACACATTGTAAG +
Preference number: 3 (lower is better)
Translates to: IPVKELNEDLNMKSGVRAKSLCY*QVTHCK
Trigger: CTTACAATGTGTCACTTGCAAATAACAAAGGGACTT...AGCTCTGACACCACTTTTCATGTTAAGATCTTCATTTAGCTCCTTTACTGGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp CACCACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGGGCTGCGGGGATCGGTaGCTCCTGGGCACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: HHPSQHTPLMHTAAPRSRGCGDR*LLGTWA
Trigger: GGCCCAGGTGCCCAGGAGGCACCGATCCCCGCAGCC...CCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CCA 90 bp CCACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCCAGAGGAGGGGCCGCTaGGACGATGCCCGGACGCGG +
Preference number: 4 (lower is better)
Translates to: PPFSAHASDAHRCAKVTVQRRGR*DDARTR
Trigger: CCGCGTCCGGGCATCGTCCCAGCGGCCCCTCCTCTG...GACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR GCA 90 bp GTCAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCGCGGGAGGAGGCCGGCTaGGGGGATCGGTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: VRGEGVVNPHRACHIAGPREEAG*GDRCLL
Trigger: CAGGAGGCACCGATCCCCGCAGCCGGCCTCCTCCCG...CGGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CCA 90 bp GTCAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCGCAGAGGAGGGGCCGCTaGGACGATGCCCGGACGCGG +
Preference number: 4 (lower is better)
Translates to: VRGEGVVNPHRACHIAGPQRRGR*DDARTR
Trigger: CCGCGTCCGGGCATCGTCCCAGCGGCCCCTCCTCTG...CGGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR GCA 90 bp CAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCGTCGGCCGCACAAAGGAGTaGGGGGCTGGGCGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: QRGGSSQSTPSLPHCRAVGRTKE*GAGREP
Trigger: AGGCTCCCGCCCAGCCCCGCACTCCTTTGTGCGGCC...GACGGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421177.6
CDS-3UTR GCA 90 bp CTACCTGCAGGGAGAGTTCTGCACCTCACGGGCCCAGGGCCGTCTCTTCCCAGCCGCGTCTCCTGCTCCTaGTCGCAGCAATGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: LPAGRVLHLTGPGPSLPSRVSCS*SQQWRR
Trigger: CCTCCGCCATTGCTGCGAGCAGGAGCAGGAGACGCG...GCTGGGAAGAGACGGCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAGGTAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421177.6
CDS-3UTR GCA 90 bp CAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCGTCCGGGAGCTCCGAGGCTaGAGCCTGGGGGTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: QRGGSSQSTPSLPHCRAVRELRG*SLGVLR
Trigger: CCTCAGGACCCCCAGGCTGCAGCCTCGGAGCTCCCG...GACGGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433139.6
CDS-3UTR CCA 90 bp CACCACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGGGGTCCAGGAGGCGCTaGGTGGTGGCGGAGACCAGA +
Preference number: 4 (lower is better)
Translates to: HHPSQHTPLMHTAAPRSRGSRRR*VVAETR
Trigger: TCTGGTCTCCGCCACCACCCAGCGCCTCCTGGACCC...CCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR TCA 90 bp CTACCTGCAGGGAGAGTTCTGCACCTCACGGGCCCAGGGCCGTCTCTTCCCAGCGGAAGACGACGCAGGTaGGGAAGGCCAGGGCGAAGA +
Preference number: 4 (lower is better)
Translates to: LPAGRVLHLTGPGPSLPSGRRRR*GRPGRR
Trigger: TCTTCGCCCTGGCCTTCCTCACCTGCGTCGTCTTCC...GCTGGGAAGAGACGGCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAGGTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp CTACCTGCAGGGAGAGTTCTGCACCTCACGGGCCCAGGGCCGTCTCTTCCCAGCGGAGGTTTTCGGTGGTaGGGGAGGCGGAGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: LPAGRVLHLTGPGPSLPSGGFRW*GRRSSA
Trigger: AGCGCTACTCCGCCTCCCGCACCACCGAAAACCTCC...GCTGGGAAGAGACGGCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAGGTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS-3UTR GCA 90 bp CAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCGTCCCGAGCCTGCCACATTaGAGGGCCGTCCCACCCCGA +
Preference number: 4 (lower is better)
Translates to: QRGGSSQSTPSLPHCRAVPSLPH*RAVPPR
Trigger: TCGGGGTGGGACGGCCCTGCAATGTGGCAGGCTCGG...GACGGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp CACCACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGCGCGTCTCCTGCTCCTaGTCGCAGCAATGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: HHPSQHTPLMHTAAPRSRRVSCS*SQQWRR
Trigger: CCTCCGCCATTGCTGCGAGCAGGAGCAGGAGACGCG...CCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421177.6
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp CTACCTGCAGGGAGAGTTCTGCACCTCACGGGCCCAGGGCCGTCTCTTCCCAGCGGAGGAGGTTTTCGGTaGTGCGGGAGGCGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: LPAGRVLHLTGPGPSLPSGGGFR*CGRRSS
Trigger: GCTACTCCGCCTCCCGCACCACCGAAAACCTCCTCC...GCTGGGAAGAGACGGCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAGGTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS-3UTR TCA 90 bp CACCACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGGGCGGGAACTGCAGCTaGTTGACATCGAGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: HHPSQHTPLMHTAAPRSRGGNCS*LTSRGV
Trigger: GACGCCCCTCGATGTCAATCAGCTGCAGTTCCCGCC...CCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp GTCAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCGGCAAAGAGCGCTCAGTaGGCCGCTTGGAGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: VRGEGVVNPHRACHIAGPAKSAQ*AAWREA
Trigger: CGCCTCCCTCCAAGCGGCGCACTGAGCGCTCTTTGC...CGGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS-3UTR GCA 90 bp CTACCTGCAGGGAGAGTTCTGCACCTCACGGGCCCAGGGCCGTCTCTTCCCAGCCACCCAGATGGGTGGTaGCCCTCCCTCCTTACCAAG +
Preference number: 4 (lower is better)
Translates to: LPAGRVLHLTGPGPSLPSHPDGW*PSLLTK
Trigger: CTTGGTAAGGAGGGAGGGGCACCACCCATCTGGGTG...GCTGGGAAGAGACGGCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAGGTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CCA 90 bp AGCAGACAGACTACCTGCAGGGAGAGTTCTGCACCTCACGGGCCCAGGGCCGTCGCTCAGTGCGCCGCTTaGAGGGAGGCGGAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: SRQTTCRESSAPHGPRAVAQCAA*REAERF
Trigger: GAACCTTTCCGCCTCCCTCCAAGCGGCGCACTGAGC...GACGGCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAGGTAGTCTGTCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CCA 90 bp CACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGGCCCTGTCAGGCGCTaGACGAGGAGGAGGCATCAC +
Preference number: 4 (lower is better)
Translates to: HPSQHTPLMHTAAPRSRSGPVRR*TRRRHH
Trigger: GTGATGCCTCCTCCTCGTCCAGCGCCTGACAGGGCC...AGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CCA 90 bp AAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGTCCTGCTCGCAGCAATaGCGGAGGCGGCGCCGCGCG +
Preference number: 4 (lower is better)
Translates to: KVHVYLEIQARPLHCAHTSCSQQ*RRRRRA
Trigger: CGCGCGGCGCCGCCTCCGCCATTGCTGCGAGCAGGA...CGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421177.6
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp CAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCGTCGGCGGGAACTGCAGCTaGTTGACATCGAGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: QRGGSSQSTPSLPHCRAVGGNCS*LTSRGV
Trigger: GACGCCCCTCGATGTCAATCAGCTGCAGTTCCCGCC...GACGGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR TCA 90 bp CACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTCTCAGCACACGCCTCTaGTGCACACCGCTGCGCCAA +
Preference number: 4 (lower is better)
Translates to: HPSQHTPLMHTAAPRSRSLSTRL*CTPLRQ
Trigger: TTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAG...AGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp CCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGCTCAGCACACGCCTCTaGTGCACACCGCTGCGCCAA +
Preference number: 4 (lower is better)
Translates to: PSQHTPLMHTAAPRSRSVLSTRL*CTPLRQ
Trigger: TTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAG...CACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp AGCAGACAGACTACCTGCAGGGAGAGTTCTGCACCTCACGGGCCCAGGGCCGTCCTCACCTGGGGGTCCTaGGGACGTTCAAGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: SRQTTCRESSAPHGPRAVLTWGS*GRSRVW
Trigger: CCAAACCCTTGAACGTCCTCAGGACCCCCAGGTGAG...GACGGCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAGGTAGTCTGTCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421177.6
CDS-3UTR GCA 90 bp CCACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCAATCCACACCGAGCCTaGCACATTGCAGGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: PPFSAHASDAHRCAKVTVNPHRA*HIAGPS
Trigger: GGACGGCCCTGCAATGTGGCAGGCTCGGTGTGGATT...GACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp ACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCTACAGGCTCGGCCTCTaGACTGTGCGCACACGGGCT +
Preference number: 4 (lower is better)
Translates to: TPLMHTAAPRSRSVSPDTYRLGL*TVRTRA
Trigger: AGCCCGTGTGCGCACAGTGCAGAGGCCGAGCCTGTA...GGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp CAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCGTCGGAGGAGGTTTTCGGTaGTGCGGGAGGCGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: QRGGSSQSTPSLPHCRAVGGGFR*CGRRSS
Trigger: GCTACTCCGCCTCCCGCACCACCGAAAACCTCCTCC...GACGGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CCA 90 bp TGCGCACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACGCCGCCCGAGCATCCTaGGCACAGAGGAGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: CAHGLHLCLFRCAGKLWHAARAS*AQRRGR
Trigger: GCGGCCCCTCCTCTGTGCCCAGGATGCTCGGGCGGC...GTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR TCA 90 bp CTACCTGCAGGGAGAGTTCTGCACCTCACGGGCCCAGGGCCGTCTCTTCCCAGCGGAACTGCAGCTGATTaGCATCGAGGGGCGTCATCA +
Preference number: 4 (lower is better)
Translates to: LPAGRVLHLTGPGPSLPSGTAAD*HRGASS
Trigger: TGATGACGCCCCTCGATGTCAATCAGCTGCAGTTCC...GCTGGGAAGAGACGGCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAGGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR TCA 90 bp AGTCAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCCTCAGCACACGCCTCTaGTGCACACCGCTGCGCCAA +
Preference number: 4 (lower is better)
Translates to: SQRGGSSQSTPSLPHCRALSTRL*CTPLRQ
Trigger: TTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAG...GGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp AGCAGACAGACTACCTGCAGGGAGAGTTCTGCACCTCACGGGCCCAGGGCCGTCGAGACCAGAGCAGGGTaGTCCTTAGTGCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: SRQTTCRESSAPHGPRAVETRAG*SLVLGW
Trigger: CCAACCCAGCACTAAGGAGCACCCTGCTCTGGTCTC...GACGGCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAGGTAGTCTGTCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp ACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCAATCCACACCGAGCCTaGCACATTGCAGGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: TPLMHTAAPRSRSVSPDTNPHRA*HIAGPS
Trigger: GGACGGCCCTGCAATGTGGCAGGCTCGGTGTGGATT...GGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp CAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCGTCCACCCAGATGGGTGGTaGCCCTCCCTCCTTACCAAG +
Preference number: 4 (lower is better)
Translates to: QRGGSSQSTPSLPHCRAVHPDGW*PSLLTK
Trigger: CTTGGTAAGGAGGGAGGGGCACCACCCATCTGGGTG...GACGGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp CACCACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGATGCACACCGCTaGGCCAAGGTCACGGTCTGT +
Preference number: 4 (lower is better)
Translates to: HHPSQHTPLMHTAAPRSRSDAHR*AKVTVC
Trigger: ACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGA...CCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp CACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTTCGGCCTCTGCACTGTaGGCACACGGGCTTCACTTG +
Preference number: 4 (lower is better)
Translates to: HPSQHTPLMHTAAPRSRSSASAL*AHGLHL
Trigger: CAAGTGAAGCCCGTGTGCGCACAGTGCAGAGGCCGA...AGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp CACCACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTTCCTCCGCTCTGGTTaGCAGAGAAGGTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: HHPSQHTPLMHTAAPRSRFLRSG*QRRWRS
Trigger: GGACCTCCACCTTCTCTGCCAACCAGAGCGGAGGAA...CCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CCA 90 bp ACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCACGGATGAAAGACTATaGGGTGTGGGGGCGAGGCCG +
Preference number: 4 (lower is better)
Translates to: TPLMHTAAPRSRSVSPDTTDERL*GVGARP
Trigger: CGGCCTCGCCCCCACACCCCATAGTCTTTCATCCGT...GGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR TCA 90 bp CACCACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGGGAACTGCAGCTGATTaGCATCGAGGGGCGTCATCA +
Preference number: 4 (lower is better)
Translates to: HHPSQHTPLMHTAAPRSRGTAAD*HRGASS
Trigger: TGATGACGCCCCTCGATGTCAATCAGCTGCAGTTCC...CCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp CCACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCAGCACTGTTACCCGCTaGTGGCCGAGGAAGAAATGC +
Preference number: 4 (lower is better)
Translates to: PPFSAHASDAHRCAKVTVSTVTR*WPRKKC
Trigger: GCATTTCTTCCTCGGCCATCAGCGGGTAACAGTGCT...GACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp CACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTAAACAAGAGTGGCGCTaGCCACGGTCACCATGCCTG +
Preference number: 4 (lower is better)
Translates to: HPSQHTPLMHTAAPRSRSKQEWR*PRSPCL
Trigger: CAGGCATGGTGACCGTGGTCAGCGCCACTCTTGTTT...AGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR TCA 90 bp AAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGGCTCAGCACACGCCTCTaGTGCACACCGCTGCGCCAA +
Preference number: 4 (lower is better)
Translates to: KSTSTWKYRLGLCTVRTRLSTRL*CTPLRQ
Trigger: TTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAG...CCGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp AAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGGGGAGGTTTTCGGTGGTaGGGGAGGCGGAGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: KSTSTWKYRLGLCTVRTRGGFRW*GRRSSA
Trigger: AGCGCTACTCCGCCTCCCGCACCACCGAAAACCTCC...CCGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS-3UTR GCA 90 bp ACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCGAGACCAGAGCAGGGTaGTCCTTAGTGCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: TPLMHTAAPRSRSVSPDTETRAG*SLVLGW
Trigger: CCAACCCAGCACTAAGGAGCACCCTGCTCTGGTCTC...GGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp AAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGCGCGTCTCCTGCTCCTaGTCGCAGCAATGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: KVHVYLEIQARPLHCAHTRVSCS*SQQWRR
Trigger: CCTCCGCCATTGCTGCGAGCAGGAGCAGGAGACGCG...CGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421177.6
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp AAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGGGCTCAGTGCGCCGCTTaGAGGGAGGCGGAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: KSTSTWKYRLGLCTVRTRAQCAA*REAERF
Trigger: GAACCTTTCCGCCTCCCTCCAAGCGGCGCACTGAGC...CCGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CCA 90 bp TGCGCACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACGGGTCCAGGAGGCGCTaGGTGGTGGCGGAGACCAGA +
Preference number: 4 (lower is better)
Translates to: CAHGLHLCLFRCAGKLWHGSRRR*VVAETR
Trigger: TCTGGTCTCCGCCACCACCCAGCGCCTCCTGGACCC...GTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CCA 90 bp CTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGGGCTTCACTTGTGTCCTGTCTCCACCCAGATaGGTGGTGCCCCTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LEIQARPLHCAHTGFTCVLSPPR*VVPLPP
Trigger: AGGAGGGAGGGGCACCACCCATCTGGGTGGAGACAG...GACACAAGTGAAGCCCGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CCA 90 bp ACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCAAAGACTATGGGGTGTaGGGGCGAGGCCGAAATGGG +
Preference number: 4 (lower is better)
Translates to: TPLMHTAAPRSRSVSPDTKDYGV*GRGRNG
Trigger: CCCATTTCGGCCTCGCCCCCACACCCCATAGTCTTT...GGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR TCA 90 bp AAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGGCGATACGGAGCGCGTaGTGCTCTGCTTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: KVHVYLEIQARPLHCAHTAIRSA*CSAWPG
Trigger: ACCTGGCCAAGCAGAGCATCACGCGCTCCGTATCGC...CGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp AGTCAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCCCCATCCCGCTAAGCTaGCTTCTCAGCCGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: SQRGGSSQSTPSLPHCRAPIPLS*LLSRFS
Trigger: ACTGAAGCGGCTGAGAAGTCAGCTTAGCGGGATGGG...GGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR TCA 90 bp ACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCAGCACTGTTACCCGCTaGTGGCCGAGGAAGAAATGC +
Preference number: 4 (lower is better)
Translates to: TPLMHTAAPRSRSVSPDTSTVTR*WPRKKC
Trigger: GCATTTCTTCCTCGGCCATCAGCGGGTAACAGTGCT...GGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp CCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGGCCGCTTCAGTCTCCTaGTCGGACAGCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PSQHTPLMHTAAPRSRSVAASVS*SDSFSS
Trigger: AGAAGAGAAGCTGTCCGAGCAGGAGACTGAAGCGGC...CACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp GTCAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCGGCCCTCTCCCTCACATaGTCTGCCAGTCTACACACA +
Preference number: 4 (lower is better)
Translates to: VRGEGVVNPHRACHIAGPALSLT*SASLHT
Trigger: TGTGTGTAGACTGGCAGAGCATGTGAGGGAGAGGGC...CGGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp CAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCGTCGCCCTCTCCCTCACATaGTCTGCCAGTCTACACACA +
Preference number: 4 (lower is better)
Translates to: QRGGSSQSTPSLPHCRAVALSLT*SASLHT
Trigger: TGTGTGTAGACTGGCAGAGCATGTGAGGGAGAGGGC...GACGGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp CCACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCAGCAGACAGACTACCTaGAGGGAGAGTTCTGCACCT +
Preference number: 4 (lower is better)
Translates to: PPFSAHASDAHRCAKVTVSRQTT*RESSAP
Trigger: AGGTGCAGAACTCTCCCTGCAGGTAGTCTGTCTGCT...GACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp AGTCAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCTCTGATGCACACCGCTaGGCCAAGGTCACGGTCTGT +
Preference number: 4 (lower is better)
Translates to: SQRGGSSQSTPSLPHCRASDAHR*AKVTVC
Trigger: ACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGA...GGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp CCGCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCTTACTACAGTGCACCTTCGGCCTCTGCACTGTaGGCACACGGGCTTCACTTG +
Preference number: 4 (lower is better)
Translates to: PLRQGHGLCLQTPYYSAPSASAL*AHGLHL
Trigger: CAAGTGAAGCCCGTGTGCGCACAGTGCAGAGGCCGA...AGGTGCACTGTAGTAAGGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp ACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCTCCACTTCAGAAATCTaGCCAGGCATCGCGAGGGTC +
Preference number: 4 (lower is better)
Translates to: TPLMHTAAPRSRSVSPDTSTSEI*PGIARV
Trigger: GACCCTCGCGATGCCTGGGCAGATTTCTGAAGTGGA...GGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513555.5
CDS-3UTR CCA 90 bp CCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGATTTCTCCCGGGCACTaGAGTCTTGCTCCGCGTAGT +
Preference number: 4 (lower is better)
Translates to: PSQHTPLMHTAAPRSRSVISPGH*SLAPRS
Trigger: ACTACGCGGAGCAAGACTCCAGTGCCCGGGAGAAAT...CACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp CACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGACACACCAGCACTTTaGGAGGCCAAGACCAGCAGA +
Preference number: 4 (lower is better)
Translates to: HPSQHTPLMHTAAPRSRSDTPAL*EAKTSR
Trigger: TCTGCTGGTCTTGGCCTCCCAAAGTGCTGGTGTGTC...AGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CCA 90 bp CTCGTTCTCTATGCCACTTACTTACTACAGTGCACCTTGGCAGCAGTCAGCACTGGGGCGAGGCCGAAATaGGAGTGGAGCCCGCGCGGG +
Preference number: 4 (lower is better)
Translates to: LVLYATYLLQCTLAAVSTGARPK*EWSPRG
Trigger: CCCGCGCGGGCTCCACTCCCATTTCGGCCTCGCCCC...AGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGTAAGTGGCATAGAGAACGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR TCA 90 bp CTGTGCGCACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGGGCGGGAACTGCAGCTaGTTGACATCGAGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: LCAHGLHLCLFRCAGKLWGGNCS*LTSRGV
Trigger: GACGCCCCTCGATGTCAATCAGCTGCAGTTCCCGCC...CCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGCGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp TGCGCACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACGGCGGGAACTGCAGCTaGTTGACATCGAGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: CAHGLHLCLFRCAGKLWHGGNCS*LTSRGV
Trigger: GACGCCCCTCGATGTCAATCAGCTGCAGTTCCCGCC...GTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp AGTCAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCAGCACTGTTACCCGCTaGTGGCCGAGGAAGAAATGC +
Preference number: 4 (lower is better)
Translates to: SQRGGSSQSTPSLPHCRASTVTR*WPRKKC
Trigger: GCATTTCTTCCTCGGCCATCAGCGGGTAACAGTGCT...GGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR TCA 90 bp CACGGTCTGTGTCTCCAGACACCTTACTACAGTGCACCTTGGCAGCAGTCAGCACTCAGCACACGCCTCTaGTGCACACCGCTGCGCCAA +
Preference number: 4 (lower is better)
Translates to: HGLCLQTPYYSAPWQQSALSTRL*CTPLRQ
Trigger: TTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAG...TGCTGACTGCTGCCAAGGTGCACTGTAGTAAGGTGTCTGGAGACACAGACCGTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp GGTCTGTGTCTCCAGACACCTTACTACAGTGCACCTTGGCAGCAGTCAGCACTGTCCTCCAGCAGCGGCTaGTTGGTGCCCTTCTCTGCG +
Preference number: 4 (lower is better)
Translates to: GLCLQTPYYSAPWQQSALSSSSG*LVPFSA
Trigger: CGCAGAGAAGGGCACCAAGCAGCCGCTGCTGGAGGA...CAGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGGTGTCTGGAGACACAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp CCACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCGTGCTTTCCCTTTCTTaGGGTCAGGTTCATACTCGG +
Preference number: 4 (lower is better)
Translates to: PPFSAHASDAHRCAKVTVVLSLS*GQVHTR
Trigger: CCGAGTATGAACCTGACCGCAAGAAAGGGAAAGCAC...GACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp AGCAGACAGACTACCTGCAGGGAGAGTTCTGCACCTCACGGGCCCAGGGCCGTCAATTTGGGGAGGACGTaGTTTCCCTTTCTTGCGGTC +
Preference number: 4 (lower is better)
Translates to: SRQTTCRESSAPHGPRAVNLGRT*FPFLAV
Trigger: GACCGCAAGAAAGGGAAAGCACGTCCTCCCCAAATT...GACGGCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAGGTAGTCTGTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp CACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTATGCACTTGATTTTATaGCCGTGGGTGGTCGGCAGC +
Preference number: 4 (lower is better)
Translates to: HPSQHTPLMHTAAPRSRSMHLIL*PWVVGS
Trigger: GCTGCCGACCACCCACGGGCATAAAATCAAGTGCAT...AGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp ACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCATGCACTTGATTTTATaGCCGTGGGTGGTCGGCAGC +
Preference number: 4 (lower is better)
Translates to: TPLMHTAAPRSRSVSPDTMHLIL*PWVVGS
Trigger: GCTGCCGACCACCCACGGGCATAAAATCAAGTGCAT...GGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp AGTCAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCATTTTGTTTGCACGGTaGCACACCAGTCCCCCACCC +
Preference number: 4 (lower is better)
Translates to: SQRGGSSQSTPSLPHCRAILFAR*HTSPPP
Trigger: GGGTGGGGGACTGGTGTGGCACCGTGCAAACAAAAT...GGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp CTCGTTCTCTATGCCACTTACTTACTACAGTGCACCTTGGCAGCAGTCAGCACTGGGCCGCTGGGACGATaGCCGGACGCGGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LVLYATYLLQCTLAAVSTGPLGR*PDAERR
Trigger: CCTTCTCTCCGCGTCCGGGCATCGTCCCAGCGGCCC...AGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGTAAGTGGCATAGAGAACGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CCA 90 bp AAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGGGACGTTCAAGGGTTTaGGGGGATGGGTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: KVHVYLEIQARPLHCAHTGRSRV*GDGSRR
Trigger: CCTCCTGGACCCATCCCCCCAAACCCTTGAACGTCC...CGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CCA 90 bp CAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCGTCCCTTCTGGGATGCACTaGGTGTTCTTGAGGACGAAC +
Preference number: 4 (lower is better)
Translates to: QRGGSSQSTPSLPHCRAVPSGMH*VFLRTN
Trigger: GTTCGTCCTCAAGAACACCCAGTGCATCCCAGAAGG...GACGGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CCA 90 bp CCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGGCTCTCCAAGCCTTCTaGGATGCACTGGGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: PSQHTPLMHTAAPRSRSVALQAF*DALGVL
Trigger: AAGAACACCCAGTGCATCCCAGAAGGCTTGGAGAGC...CACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp CTACCTGCAGGGAGAGTTCTGCACCTCACGGGCCCAGGGCCGTCTCTTCCCAGCTTGATTTTATGCCCGTaGGTGGTCGGCAGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: LPAGRVLHLTGPGPSLPSLILCP*VVGSKF
Trigger: AAACTTGCTGCCGACCACCCACGGGCATAAAATCAA...GCTGGGAAGAGACGGCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAGGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CCA 90 bp GCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACATCCTGCTCGCAGCAATaGCGGAGGCGGCGCCGCGCG +
Preference number: 4 (lower is better)
Translates to: AMEEGLQTAGSVQKINSTSCSQQ*RRRRRA
Trigger: CGCGCGGCGCCGCCTCCGCCATTGCTGCGAGCAGGA...TGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421177.6
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp GAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGTCCTGCTCGCAGCAATaGCGGAGGCGGCGCCGCGCG +
Preference number: 4 (lower is better)
Translates to: EFTVNKVHVYLEIQARPLSCSQQ*RRRRRA
Trigger: CGCGCGGCGCCGCCTCCGCCATTGCTGCGAGCAGGA...CAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421177.6
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp CACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGCTTTCCCTTTCTTaGGGTCAGGTTCATACTCGG +
Preference number: 4 (lower is better)
Translates to: HPSQHTPLMHTAAPRSRSVLSLS*GQVHTR
Trigger: CCGAGTATGAACCTGACCGCAAGAAAGGGAAAGCAC...AGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp CAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCGTCGTGCTTTCCCTTTCTTaGGGTCAGGTTCATACTCGG +
Preference number: 4 (lower is better)
Translates to: QRGGSSQSTPSLPHCRAVVLSLS*GQVHTR
Trigger: CCGAGTATGAACCTGACCGCAAGAAAGGGAAAGCAC...GACGGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp GTCAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCGAATTTGGGGAGGACGTaGTTTCCCTTTCTTGCGGTC +
Preference number: 4 (lower is better)
Translates to: VRGEGVVNPHRACHIAGPNLGRT*FPFLAV
Trigger: GACCGCAAGAAAGGGAAAGCACGTCCTCCCCAAATT...CGGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp AGCAGACAGACTACCTGCAGGGAGAGTTCTGCACCTCACGGGCCCAGGGCCGTCACTTACTTACTACAGTaGACCTTGGCAGCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: SRQTTCRESSAPHGPRAVTYLLQ*TLAAVS
Trigger: GCTGACTGCTGCCAAGGTGCACTGTAGTAAGTAAGT...GACGGCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAGGTAGTCTGTCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp AAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGGCCCCACAGCCTTTCCTaGCTGTTTCCCACATCAAGG +
Preference number: 4 (lower is better)
Translates to: KSTSTWKYRLGLCTVRTRPHSLS*LFPTSR
Trigger: CCTTGATGTGGGAAACAGGCAGGAAAGGCTGTGGGG...CCGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp TGCGCACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTCGGCCTCTGCACTGTaGGCACACGGGCTTCACTTG +
Preference number: 4 (lower is better)
Translates to: CAHGLHLCLFRCAGKLWHSASAL*AHGLHL
Trigger: CAAGTGAAGCCCGTGTGCGCACAGTGCAGAGGCCGA...GTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp CCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGCTAGCTGGCCTTTTGTaGTGTCTTGGGTCTTCACTG +
Preference number: 4 (lower is better)
Translates to: PSQHTPLMHTAAPRSRSVLAGLL*CLGSSL
Trigger: CAGTGAAGACCCAAGACAGCACAAAAGGCCAGCTAG...CACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421177.6
CDS-3UTR GCA 90 bp TTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATGGAGGAAGGTTTGGGCTGCGGGGATCGGTaGCTCCTGGGCACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LLLAQREITLDMAMEEGLGCGDR*LLGTWA
Trigger: GGCCCAGGTGCCCAGGAGGCACCGATCCCCGCAGCC...CAAACCTTCCTCCATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR GCA 90 bp TTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATGGAGGAAGGTTTGCGGGAGGAGGCCGGCTaGGGGGATCGGTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LLLAQREITLDMAMEEGLREEAG*GDRCLL
Trigger: CAGGAGGCACCGATCCCCGCAGCCGGCCTCCTCCCG...CAAACCTTCCTCCATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR GCA 90 bp CAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGGGTTCTAGCCCGACCTaGGCCCCCAAACCCCGAGCT +
Preference number: 4 (lower is better)
Translates to: QSIKSTSTWKYRLGLCTVGSSPT*APKPRA
Trigger: AGCTCGGGGTTTGGGGGCGCAGGTCGGGCTAGAACC...CACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR GCA 90 bp GAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGGGGCCGCTGGGACGATaGCCGGACGCGGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: EFTVNKVHVYLEIQARPLGPLGR*PDAERR
Trigger: CCTTCTCTCCGCGTCCGGGCATCGTCCCAGCGGCCC...CAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR GCA 90 bp GCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTCGCCGCCTCCCTTCCTaGCTCTCCCGGGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: AQGSFGTDLLLLSHFPQLRRLPS*LSRGLG
Trigger: ACCCAGCCCCCGGGAGAGGCAGGAAGGGAGGCGGCG...AAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421177.6
CDS-3UTR GCA 90 bp ATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACAGAGCTCCGCGTCTCCTaGTCCTGCTCGCAGCAATGG +
Preference number: 4 (lower is better)
Translates to: IKSTSTWKYRLGLCTVRTELRVS*SCSQQW
Trigger: CCATTGCTGCGAGCAGGAGCAGGAGACGCGGAGCTC...TGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421177.6
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp CACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGAACTCAGCAATTTaGGGAGGACGTGCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: HPSQHTPLMHTAAPRSRSVNSAI*GGRAFP
Trigger: AGGGAAAGCACGTCCTCCCCAAATTGCTGAGTTCAC...AGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp AGCAGACAGACTACCTGCAGGGAGAGTTCTGCACCTCACGGGCCCAGGGCCGTCTACTACAGTGCACCTTaGCAGCAGTCAGCACTGTTA +
Preference number: 4 (lower is better)
Translates to: SRQTTCRESSAPHGPRAVYYSAP*QQSALL
Trigger: TAACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTA...GACGGCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAGGTAGTCTGTCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CCA 90 bp CCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGACTGGTGCTGGTCATTaGGACTGTTTCATCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PSQHTPLMHTAAPRSRSVTGAGH*DCFILW
Trigger: CCACAGGATGAAACAGTCCCAATGACCAGCACCAGT...CACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421177.6
CDS-3UTR CCA 90 bp CTACCTGCAGGGAGAGTTCTGCACCTCACGGGCCCAGGGCCGTCTCTTCCCAGCAGGTTGTCCCAGAGATaGACGGTGAACAATCATGTT +
Preference number: 4 (lower is better)
Translates to: LPAGRVLHLTGPGPSLPSRLSQR*TVNNHV
Trigger: AACATGATTGTTCACCGTCCATCTCTGGGACAACCT...GCTGGGAAGAGACGGCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAGGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421177.6
CDS-3UTR TCA 90 bp CTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATCTCCGGCAGGTCAGCTaGGCGCTCCGAGCTCCGCGT +
Preference number: 4 (lower is better)
Translates to: LDFMPVGGRQQVLFAKQHLRQVS*ALRAPR
Trigger: ACGCGGAGCTCGGAGCGCTCAGCTGACCTGCCGGAG...ATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp CAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGGGAAGACGACGCAGGTaGGGAAGGCCAGGGCGAAGA +
Preference number: 4 (lower is better)
Translates to: QSIKSTSTWKYRLGLCTVGRRRR*GRPGRR
Trigger: TCTTCGCCCTGGCCTTCCTCACCTGCGTCGTCTTCC...CACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp CGGTCTGTGTCTCCAGACACCTTACTACAGTGCACCTTGGCAGCAGTCAGCACTCCCATCCCGCTAAGCTaGCTTCTCAGCCGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: RSVSPDTLLQCTLAAVSTPIPLS*LLSRFS
Trigger: ACTGAAGCGGCTGAGAAGTCAGCTTAGCGGGATGGG...AGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGGTGTCTGGAGACACAGACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp CCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGATGCTGAAATGCACTTaGTTTTATGCCCGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PSQHTPLMHTAAPRSRSVMLKCT*FYARGW
Trigger: CCACCCACGGGCATAAAATCAAGTGCATTTCAGCAT...CACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp ACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCATGCTGAAATGCACTTaGTTTTATGCCCGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: TPLMHTAAPRSRSVSPDTMLKCT*FYARGW
Trigger: CCACCCACGGGCATAAAATCAAGTGCATTTCAGCAT...GGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp CGCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCTTACTACAGTGCACCTTAGCACTGTTACCCGCTaGTGGCCGAGGAAGAAATGC +
Preference number: 4 (lower is better)
Translates to: RCAKVTVCVSRHLTTVHLSTVTR*WPRKKC
Trigger: GCATTTCTTCCTCGGCCATCAGCGGGTAACAGTGCT...AAGGTGCACTGTAGTAAGGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp CCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGACTTACTTACTACAGTaGACCTTGGCAGCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: PSQHTPLMHTAAPRSRSVTYLLQ*TLAAVS
Trigger: GCTGACTGCTGCCAAGGTGCACTGTAGTAAGTAAGT...CACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp GCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACACCGAGCCTGCCACATTaGAGGGCCGTCCCACCCCGA +
Preference number: 4 (lower is better)
Translates to: AMEEGLQTAGSVQKINSTPSLPH*RAVPPR
Trigger: TCGGGGTGGGACGGCCCTGCAATGTGGCAGGCTCGG...TGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp ATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACACCCAGATGGGTGGTaGCCCTCCCTCCTTACCAAG +
Preference number: 4 (lower is better)
Translates to: IKSTSTWKYRLGLCTVRTHPDGW*PSLLTK
Trigger: CTTGGTAAGGAGGGAGGGGCACCACCCATCTGGGTG...TGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp CTCGTTCTCTATGCCACTTACTTACTACAGTGCACCTTGGCAGCAGTCAGCACTCTGCAGGGAGAGTTCTaGACCTCACGGGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LVLYATYLLQCTLAAVSTLQGEF*TSRAQG
Trigger: GCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAG...AGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGTAAGTGGCATAGAGAACGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp ACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCTTGTGTCTATTCAGATaGGCAGGGAAGCTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: TPLMHTAAPRSRSVSPDTLCLFR*AGKLWH
Trigger: GTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAA...GGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp CTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGGGCTTCACTTGTGTCGACACCTTACTACAGTaGACCTTGGCAGCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: LEIQARPLHCAHTGFTCVDTLLQ*TLAAVS
Trigger: GCTGACTGCTGCCAAGGTGCACTGTAGTAAGGTGTC...GACACAAGTGAAGCCCGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp CAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGGCTCAGTGCGCCGCTTaGAGGGAGGCGGAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: QSIKSTSTWKYRLGLCTVAQCAA*REAERF
Trigger: GAACCTTTCCGCCTCCCTCCAAGCGGCGCACTGAGC...CACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CCA 90 bp CCGCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCTTACTACAGTGCACCTGCTCTCCAAGCCTTCTaGGATGCACTGGGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: PLRQGHGLCLQTPYYSAPALQAF*DALGVL
Trigger: AAGAACACCCAGTGCATCCCAGAAGGCTTGGAGAGC...AGGTGCACTGTAGTAAGGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp GAAGAAATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGGGCGAGGCCGAAATaGGAGTGGAGCCCGCGCGGG +
Preference number: 4 (lower is better)
Translates to: EEMRSRLALSTARDHSRYGARPK*EWSPRG
Trigger: CCCGCGCGGGCTCCACTCCCATTTCGGCCTCGCCCC...ATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CCA 90 bp TATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACAAAGCCGCCCGAGCATCCTaGGCACAGAGGAGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: YGGRFADSRVGSENQFHKAARAS*AQRRGR
Trigger: GCGGCCCCTCCTCTGTGCCCAGGATGCTCGGGCGGC...TTTGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CCA 90 bp AGATATGGCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAAGTGGGTGCGCGCGTGTaGCCGCGCCTCCACCTTGAC +
Preference number: 4 (lower is better)
Translates to: RYGYGGRFADSRVGSENQVGARV*PRLHLD
Trigger: GTCAAGGTGGAGGCGCGGCCACACGCGCGCACCCAC...TTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGCCATATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421177.6
CDS-3UTR TCA 90 bp TATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACAAACTCCGGCAGGTCAGCTaGGCGCTCCGAGCTCCGCGT +
Preference number: 4 (lower is better)
Translates to: YGGRFADSRVGSENQFHKLRQVS*ALRAPR
Trigger: ACGCGGAGCTCGGAGCGCTCAGCTGACCTGCCGGAG...TTTGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp CGGTCTGTGTCTCCAGACACCTTACTACAGTGCACCTTGGCAGCAGTCAGCACTGGAACTGCAGCTGATTaGCATCGAGGGGCGTCATCA +
Preference number: 4 (lower is better)
Translates to: RSVSPDTLLQCTLAAVSTGTAAD*HRGASS
Trigger: TGATGACGCCCCTCGATGTCAATCAGCTGCAGTTCC...AGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGGTGTCTGGAGACACAGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp TTCTGTCTTAGAAGCACATTTCAGGAAACAAGAGTGGCGCTGACCACGGTCACCGCGATACGGAGCGCGTaGTGCTCTGCTTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: FCLRSTFQETRVALTTVTAIRSA*CSAWPG
Trigger: ACCTGGCCAAGCAGAGCATCACGCGCTCCGTATCGC...GGTGACCGTGGTCAGCGCCACTCTTGTTTCCTGAAATGTGCTTCTAAGACAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR TCA 90 bp AGTCAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCATGCTGAAATGCACTTaGTTTTATGCCCGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SQRGGSSQSTPSLPHCRAMLKCT*FYARGW
Trigger: CCACCCACGGGCATAAAATCAAGTGCATTTCAGCAT...GGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR TCA 90 bp CTACCTGCAGGGAGAGTTCTGCACCTCACGGGCCCAGGGCCGTCTCTTCCCAGCCAAAATGCATTTATCTaGGATCCAAACCCTTCGCAT +
Preference number: 4 (lower is better)
Translates to: LPAGRVLHLTGPGPSLPSQNAFI*DPNPSH
Trigger: ATGCGAAGGGTTTGGATCTCAGATAAATGCATTTTG...GCTGGGAAGAGACGGCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR TCA 90 bp CACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGGGAAGCTTTGGCACTaGTTTATTGCTCTTGAGTCA +
Preference number: 4 (lower is better)
Translates to: HPSQHTPLMHTAAPRSRSGKLWH*FIALES
Trigger: TGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCC...AGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp ACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTGATTTCCTCCAGCAGCGGCTaGTTGGTGCCCTTCTCTGCG +
Preference number: 4 (lower is better)
Translates to: TRASLVSIQMRREALALISSSSG*LVPFSA
Trigger: CGCAGAGAAGGGCACCAAGCAGCCGCTGCTGGAGGA...AATCAGTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp CTACCTGCAGGGAGAGTTCTGCACCTCACGGGCCCAGGGCCGTCTCTTCCCAGCTTTCCTCGTTCTCTATaGCACTTACTTACTACAGTG +
Preference number: 4 (lower is better)
Translates to: LPAGRVLHLTGPGPSLPSFPRSL*HLLTTV
Trigger: CACTGTAGTAAGTAAGTGGCATAGAGAACGAGGAAA...GCTGGGAAGAGACGGCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAGGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp GTCAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCGATTTGTCATTTTGTTTaGACGGTGCCACACCAGTCC +
Preference number: 4 (lower is better)
Translates to: VRGEGVVNPHRACHIAGPICHFV*TVPHQS
Trigger: GGACTGGTGTGGCACCGTGCAAACAAAATGACAAAT...CGGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp GAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGGGTTCTAGCCCGACCTaGGCCCCCAAACCCCGAGCT +
Preference number: 4 (lower is better)
Translates to: EFTVNKVHVYLEIQARPLGSSPT*APKPRA
Trigger: AGCTCGGGGTTTGGGGGCGCAGGTCGGGCTAGAACC...CAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CCA 90 bp TGCGCACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACAAGGTTCCTCCGCTCTaGTTGGCAGAGAAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: CAHGLHLCLFRCAGKLWHKVPPL*LAEKVE
Trigger: CTCCACCTTCTCTGCCAACCAGAGCGGAGGAACCTT...GTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CCA 90 bp AAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGCCTTCTGGGATGCACTaGGTGTTCTTGAGGACGAAC +
Preference number: 4 (lower is better)
Translates to: KVHVYLEIQARPLHCAHTPSGMH*VFLRTN
Trigger: GTTCGTCCTCAAGAACACCCAGTGCATCCCAGAAGG...CGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp ACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCTTTTATGCCCGTGGGTaGTCGGCAGCAAGTTTTATT +
Preference number: 4 (lower is better)
Translates to: TPLMHTAAPRSRSVSPDTFYARG*SAASFI
Trigger: AATAAAACTTGCTGCCGACCACCCACGGGCATAAAA...GGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp ACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCTCTGAGAATCCTTTTTaGCACTTTGATGCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: TPLMHTAAPRSRSVSPDTSENPF*HFDASL
Trigger: CAGGGAGGCATCAAAGTGCCAAAAAGGATTCTCAGA...GGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CCA 90 bp CTAGATATGGCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCGGCCCTGTCAGGCGCTaGACGAGGAGGAGGCATCAC +
Preference number: 4 (lower is better)
Translates to: LDMAMEEGLQTAGSVQKIGPVRR*TRRRHH
Trigger: GTGATGCCTCCTCCTCGTCCAGCGCCTGACAGGGCC...GATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGCCATATCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CCA 90 bp CTTTTTCCTCGTTCTCTATGCCACTTACTTACTACAGTGCACCTTGGCAGCAGTAGGCCGAAATGGGAGTaGAGCCCGCGCGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LFPRSLCHLLTTVHLGSSRPKWE*SPRGRR
Trigger: CCTCCTCCCGCGCGGGCTCCACTCCCATTTCGGCCT...ACTGCTGCCAAGGTGCACTGTAGTAAGTAAGTGGCATAGAGAACGAGGAAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CCA 90 bp ATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATAGGCCGAAATGGGAGTaGAGCCCGCGCGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: MRSRLALSTARDHSRYGYRPKWE*SPRGRR
Trigger: CCTCCTCCCGCGCGGGCTCCACTCCCATTTCGGCCT...ATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR TCA 90 bp GCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACAGGCGGGAACTGCAGCTaGTTGACATCGAGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: AMEEGLQTAGSVQKINSTGGNCS*LTSRGV
Trigger: GACGCCCCTCGATGTCAATCAGCTGCAGTTCCCGCC...TGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp CCACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCGGTTGTAGTGGTTTATaGCTGTGTAAAATTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PPFSAHASDAHRCAKVTVGCSGL*LCKISP
Trigger: GGGAGAAATTTTACACAGTCATAAACCACTACAACC...GACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp GAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGGCGATACGGAGCGCGTaGTGCTCTGCTTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: EFTVNKVHVYLEIQARPLAIRSA*CSAWPG
Trigger: ACCTGGCCAAGCAGAGCATCACGCGCTCCGTATCGC...CAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp CACTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCGCGATACGGAGCGCGTaGTGCTCTGCTTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: HLILCPWVVGSKFYLQSSAIRSA*CSAWPG
Trigger: ACCTGGCCAAGCAGAGCATCACGCGCTCCGTATCGC...GCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp CAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGAAACAAGAGTGGCGCTaGCCACGGTCACCATGCCTG +
Preference number: 4 (lower is better)
Translates to: QSIKSTSTWKYRLGLCTVKQEWR*PRSPCL
Trigger: CAGGCATGGTGACCGTGGTCAGCGCCACTCTTGTTT...CACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR TCA 90 bp ATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACATGCAGGACTCACGGATaGAAGACTATGGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: IKSTSTWKYRLGLCTVRTCRTHG*KTMGCG
Trigger: CCCACACCCCATAGTCTTTCATCCGTGAGTCCTGCA...TGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR GCA 90 bp TTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATGGAGGAAGGTTTGGCAAAGAGCGCTCAGTaGGCCGCTTGGAGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: LLLAQREITLDMAMEEGLAKSAQ*AAWREA
Trigger: CGCCTCCCTCCAAGCGGCGCACTGAGCGCTCTTTGC...CAAACCTTCCTCCATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS-3UTR GCA 90 bp AAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGAATTTGGGGAGGACGTaGTTTCCCTTTCTTGCGGTC +
Preference number: 4 (lower is better)
Translates to: KVHVYLEIQARPLHCAHTNLGRT*FPFLAV
Trigger: GACCGCAAGAAAGGGAAAGCACGTCCTCCCCAAATT...CGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp AAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGGTGGCCGAGGAAGAAATaGGAAGTAGGCTTGCTCTTA +
Preference number: 4 (lower is better)
Translates to: KSTSTWKYRLGLCTVRTRWPRKK*EVGLLL
Trigger: TAAGAGCAAGCCTACTTCGCATTTCTTCCTCGGCCA...CCGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp CACCACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTTTCCTCGTTCTCTATaGCACTTACTTACTACAGTG +
Preference number: 4 (lower is better)
Translates to: HHPSQHTPLMHTAAPRSRFPRSL*HLLTTV
Trigger: CACTGTAGTAAGTAAGTGGCATAGAGAACGAGGAAA...CCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp TATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACAAACCGAGCCTGCCACATTaGAGGGCCGTCCCACCCCGA +
Preference number: 4 (lower is better)
Translates to: YGGRFADSRVGSENQFHKPSLPH*RAVPPR
Trigger: TCGGGGTGGGACGGCCCTGCAATGTGGCAGGCTCGG...TTTGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp AGATATGGCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAACTGCAGGGAGAGTTCTaGACCTCACGGGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: RYGYGGRFADSRVGSENQLQGEF*TSRAQG
Trigger: GCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAG...TTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGCCATATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp CTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGGGCTTCACTTGTGTCTTGTGTCTATTCAGATaGGCAGGGAAGCTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: LEIQARPLHCAHTGFTCVLCLFR*AGKLWH
Trigger: GTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAA...GACACAAGTGAAGCCCGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp CCGCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCTTACTACAGTGCACCTTTGTGTCTATTCAGATaGGCAGGGAAGCTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: PLRQGHGLCLQTPYYSAPLCLFR*AGKLWH
Trigger: GTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAA...AGGTGCACTGTAGTAAGGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp GCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACATACAGGCTCGGCCTCTaGACTGTGCGCACACGGGCT +
Preference number: 4 (lower is better)
Translates to: AMEEGLQTAGSVQKINSTYRLGL*TVRTRA
Trigger: AGCCCGTGTGCGCACAGTGCAGAGGCCGAGCCTGTA...TGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp GTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATGGAGGAATACAGGCTCGGCCTCTaGACTGTGCGCACACGGGCT +
Preference number: 4 (lower is better)
Translates to: VGLLLAQREITLDMAMEEYRLGL*TVRTRA
Trigger: AGCCCGTGTGCGCACAGTGCAGAGGCCGAGCCTGTA...TTCCTCCATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp ATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACTGGGCCCTCCAAGATaGTGGCAGCTCCAAATTCCT +
Preference number: 4 (lower is better)
Translates to: IKSTSTWKYRLGLCTVRTLGPPR*WQLQIP
Trigger: AGGAATTTGGAGCTGCCAGCATCTTGGAGGGCCCAG...TGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421177.6
CDS-3UTR GCA 90 bp GCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACAGAGCTCCGCGTCTCCTaGTCCTGCTCGCAGCAATGG +
Preference number: 4 (lower is better)
Translates to: AMEEGLQTAGSVQKINSTELRVS*SCSQQW
Trigger: CCATTGCTGCGAGCAGGAGCAGGAGACGCGGAGCTC...TGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421177.6
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp TATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACAAAGGGTCCAGGAGGCGCTaGGTGGTGGCGGAGACCAGA +
Preference number: 4 (lower is better)
Translates to: YGGRFADSRVGSENQFHKGSRRR*VVAETR
Trigger: TCTGGTCTCCGCCACCACCCAGCGCCTCCTGGACCC...TTTGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CCA 90 bp CGCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCTTACTACAGTGCACCTTGTGAACTCAGCAATTTaGGGAGGACGTGCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: RCAKVTVCVSRHLTTVHLVNSAI*GGRAFP
Trigger: AGGGAAAGCACGTCCTCCCCAAATTGCTGAGTTCAC...AAGGTGCACTGTAGTAAGGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp GGTCTGTGTCTCCAGACACCTTACTACAGTGCACCTTGGCAGCAGTCAGCACTGCCTTCTGGGATGCACTaGGTGTTCTTGAGGACGAAC +
Preference number: 4 (lower is better)
Translates to: GLCLQTPYYSAPWQQSALPSGMH*VFLRTN
Trigger: GTTCGTCCTCAAGAACACCCAGTGCATCCCAGAAGG...CAGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGGTGTCTGGAGACACAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp CACGGTCTGTGTCTCCAGACACCTTACTACAGTGCACCTTGGCAGCAGTCAGCAGCTCTCCAAGCCTTCTaGGATGCACTGGGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: HGLCLQTPYYSAPWQQSAALQAF*DALGVL
Trigger: AAGAACACCCAGTGCATCCCAGAAGGCTTGGAGAGC...TGCTGACTGCTGCCAAGGTGCACTGTAGTAAGGTGTCTGGAGACACAGACCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp CTAGATATGGCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCCTGTCTCCACCCAGATaGGTGGTGCCCCTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LDMAMEEGLQTAGSVQKILSPPR*VVPLPP
Trigger: AGGAGGGAGGGGCACCACCCATCTGGGTGGAGACAG...GATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGCCATATCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CCA 90 bp CTGTGCGCACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGAAGTCCACGTCTACCTaGAAATACAGGCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: LCAHGLHLCLFRCAGKLWKSTST*KYRLGL
Trigger: GAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTT...CCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGCGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp TGCGCACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACAAGTCCACGTCTACCTaGAAATACAGGCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: CAHGLHLCLFRCAGKLWHKSTST*KYRLGL
Trigger: GAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTT...GTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp AGTCAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCTCTGAGAATCCTTTTTaGCACTTTGATGCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: SQRGGSSQSTPSLPHCRASENPF*HFDASL
Trigger: CAGGGAGGCATCAAAGTGCCAAAAAGGATTCTCAGA...GGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CCA 90 bp TTCTCTATGCCACTTACTTACTACAGTGCACCTTGGCAGCAGTCAGCACTGTTAAGGGGAGCGAACGATTaGGCTCCACGGCCGCTCCCT +
Preference number: 4 (lower is better)
Translates to: FSMPLTYYSAPWQQSALLRGAND*APRPLP
Trigger: AGGGAGCGGCCGTGGAGCCCAATCGTTCGCTCCCCT...TAACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGTAAGTGGCATAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421177.6
CDS-3UTR TCA 90 bp ACTAATGGGGCTATTGGTGCAAATTTATTCATAATAGAAGTGAACCAGAGGGCCCTCCGGCAGGTCAGCTaGGCGCTCCGAGCTCCGCGT +
Preference number: 4 (lower is better)
Translates to: TNGAIGANLFIIEVNQRALRQVS*ALRAPR
Trigger: ACGCGGAGCTCGGAGCGCTCAGCTGACCTGCCGGAG...GGCCCTCTGGTTCACTTCTATTATGAATAAATTTGCACCAATAGCCCCATTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS-3UTR TCA 90 bp TTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATGGAGGAAGGTTTGGGCGGGAACTGCAGCTaGTTGACATCGAGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: LLLAQREITLDMAMEEGLGGNCS*LTSRGV
Trigger: GACGCCCCTCGATGTCAATCAGCTGCAGTTCCCGCC...CAAACCTTCCTCCATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp CTTTTTCCTCGTTCTCTATGCCACTTACTTACTACAGTGCACCTTGGCAGCAGTGGAAGACGACGCAGGTaGGGAAGGCCAGGGCGAAGA +
Preference number: 4 (lower is better)
Translates to: LFPRSLCHLLTTVHLGSSGRRRR*GRPGRR
Trigger: TCTTCGCCCTGGCCTTCCTCACCTGCGTCGTCTTCC...ACTGCTGCCAAGGTGCACTGTAGTAAGTAAGTGGCATAGAGAACGAGGAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR TCA 90 bp CTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATGGAAGACGACGCAGGTaGGGAAGGCCAGGGCGAAGA +
Preference number: 4 (lower is better)
Translates to: LDFMPVGGRQQVLFAKQHGRRRR*GRPGRR
Trigger: TCTTCGCCCTGGCCTTCCTCACCTGCGTCGTCTTCC...ATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp CACTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCTGCACTGGGTGTTCTTaGGGACGAACCCATCGGGGC +
Preference number: 4 (lower is better)
Translates to: HLILCPWVVGSKFYLQSSCTGCS*GRTHRG
Trigger: GCCCCGATGGGTTCGTCCTCAAGAACACCCAGTGCA...GCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp ATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATGCGATACGGAGCGCGTaGTGCTCTGCTTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: MRSRLALSTARDHSRYGYAIRSA*CSAWPG
Trigger: ACCTGGCCAAGCAGAGCATCACGCGCTCCGTATCGC...ATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp GCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTGCGATACGGAGCGCGTaGTGCTCTGCTTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: AQGSFGTDLLLLSHFPQLAIRSA*CSAWPG
Trigger: ACCTGGCCAAGCAGAGCATCACGCGCTCCGTATCGC...AAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp TTCTGTCTTAGAAGCACATTTCAGGAAACAAGAGTGGCGCTGACCACGGTCACCCCCATCCCGCTAAGCTaGCTTCTCAGCCGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: FCLRSTFQETRVALTTVTPIPLS*LLSRFS
Trigger: ACTGAAGCGGCTGAGAAGTCAGCTTAGCGGGATGGG...GGTGACCGTGGTCAGCGCCACTCTTGTTTCCTGAAATGTGCTTCTAAGACAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR TCA 90 bp AGCAGACAGACTACCTGCAGGGAGAGTTCTGCACCTCACGGGCCCAGGGCCGTCCAATTGCACCGTAAATaGGTAACCTCTAAAGTATCA +
Preference number: 4 (lower is better)
Translates to: SRQTTCRESSAPHGPRAVQLHRK*VTSKVS
Trigger: TGATACTTTAGAGGTTACTCATTTACGGTGCAATTG...GACGGCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAGGTAGTCTGTCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR TCA 90 bp GCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTCTCAGCACACGCCTCTaGTGCACACCGCTGCGCCAA +
Preference number: 4 (lower is better)
Translates to: AQGSFGTDLLLLSHFPQLLSTRL*CTPLRQ
Trigger: TTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAG...AAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp AAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGGTTTCCATCAGCCGTCTaGGAATCCTTTTTGGCACTT +
Preference number: 4 (lower is better)
Translates to: KSTSTWKYRLGLCTVRTRFPSAV*ESFLAL
Trigger: AAGTGCCAAAAAGGATTCTCAGACGGCTGATGGAAA...CCGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR GCA 90 bp GAAGAAATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGCAAAGAGCGCTCAGTaGGCCGCTTGGAGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: EEMRSRLALSTARDHSRYAKSAQ*AAWREA
Trigger: CGCCTCCCTCCAAGCGGCGCACTGAGCGCTCTTTGC...ATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS-3UTR GCA 90 bp CTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATTCCTCCAGCAGCGGCTaGTTGGTGCCCTTCTCTGCG +
Preference number: 4 (lower is better)
Translates to: LDFMPVGGRQQVLFAKQHSSSSG*LVPFSA
Trigger: CGCAGAGAAGGGCACCAAGCAGCCGCTGCTGGAGGA...ATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp AGGAAGAAATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATTCCTCCAGCAGCGGCTaGTTGGTGCCCTTCTCTGCG +
Preference number: 4 (lower is better)
Translates to: RKKCEVGLLLAQREITLDSSSSG*LVPFSA
Trigger: CGCAGAGAAGGGCACCAAGCAGCCGCTGCTGGAGGA...ATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTTCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp TTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATGGAGGAAGGTTTGTCCTCCAGCAGCGGCTaGTTGGTGCCCTTCTCTGCG +
Preference number: 4 (lower is better)
Translates to: LLLAQREITLDMAMEEGLSSSSG*LVPFSA
Trigger: CGCAGAGAAGGGCACCAAGCAGCCGCTGCTGGAGGA...CAAACCTTCCTCCATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp GGAAGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTAACACCCCGAGCCTGCCACATTaGAGGGCCGTCCCACCCCGA +
Preference number: 4 (lower is better)
Translates to: GSFGTDLLLLSHFPQLNTPSLPH*RAVPPR
Trigger: TCGGGGTGGGACGGCCCTGCAATGTGGCAGGCTCGG...GGTGTTAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp TATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACAAACTGCAGGGAGAGTTCTaGACCTCACGGGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: YGGRFADSRVGSENQFHKLQGEF*TSRAQG
Trigger: GCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAG...TTTGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp CAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGATTTTGTTTGCACGGTaGCACACCAGTCCCCCACCC +
Preference number: 4 (lower is better)
Translates to: QSIKSTSTWKYRLGLCTVILFAR*HTSPPP
Trigger: GGGTGGGGGACTGGTGTGGCACCGTGCAAACAAAAT...CACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp CTCGTTCTCTATGCCACTTACTTACTACAGTGCACCTTGGCAGCAGTCAGCACTTCTGATGCACACCGCTaGGCCAAGGTCACGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LVLYATYLLQCTLAAVSTSDAHR*AKVTVC
Trigger: ACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGA...AGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGTAAGTGGCATAGAGAACGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp CTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATTACAGGCTCGGCCTCTaGACTGTGCGCACACGGGCT +
Preference number: 4 (lower is better)
Translates to: LDFMPVGGRQQVLFAKQHYRLGL*TVRTRA
Trigger: AGCCCGTGTGCGCACAGTGCAGAGGCCGAGCCTGTA...ATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp TTCTCTATGCCACTTACTTACTACAGTGCACCTTGGCAGCAGTCAGCACTGTTATACAGGCTCGGCCTCTaGACTGTGCGCACACGGGCT +
Preference number: 4 (lower is better)
Translates to: FSMPLTYYSAPWQQSALLYRLGL*TVRTRA
Trigger: AGCCCGTGTGCGCACAGTGCAGAGGCCGAGCCTGTA...TAACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGTAAGTGGCATAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp ATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACAGACACCTTACTACAGTaGACCTTGGCAGCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: IKSTSTWKYRLGLCTVRTDTLLQ*TLAAVS
Trigger: GCTGACTGCTGCCAAGGTGCACTGTAGTAAGGTGTC...TGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp GGAAGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTAACACCGGGTCCAGGAGGCGCTaGGTGGTGGCGGAGACCAGA +
Preference number: 4 (lower is better)
Translates to: GSFGTDLLLLSHFPQLNTGSRRR*VVAETR
Trigger: TCTGGTCTCCGCCACCACCCAGCGCCTCCTGGACCC...GGTGTTAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CCA 90 bp CTGTGCGCACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGGTGAACTCAGCAATTTaGGGAGGACGTGCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: LCAHGLHLCLFRCAGKLWVNSAI*GGRAFP
Trigger: AGGGAAAGCACGTCCTCCCCAAATTGCTGAGTTCAC...CCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGCGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp CTGTGTCTCCAGACACCTTACTACAGTGCACCTTGGCAGCAGTCAGCACTGTTAATTTCTCCCGGGCACTaGAGTCTTGCTCCGCGTAGT +
Preference number: 4 (lower is better)
Translates to: LCLQTPYYSAPWQQSALLISPGH*SLAPRS
Trigger: ACTACGCGGAGCAAGACTCCAGTGCCCGGGAGAAAT...TAACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGGTGTCTGGAGACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp TTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATGGAGGAAGGTTTGCTGTCTCCACCCAGATaGGTGGTGCCCCTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LLLAQREITLDMAMEEGLLSPPR*VVPLPP
Trigger: AGGAGGGAGGGGCACCACCCATCTGGGTGGAGACAG...CAAACCTTCCTCCATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CCA 90 bp GAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGACGGATGAAAGACTATaGGGTGTGGGGGCGAGGCCG +
Preference number: 4 (lower is better)
Translates to: EFTVNKVHVYLEIQARPLTDERL*GVGARP
Trigger: CGGCCTCGCCCCCACACCCCATAGTCTTTCATCCGT...CAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR TCA 90 bp AGGAAGAAATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATTGCTCCTGGGGGTCCTaGGGACGTTCAAGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: RKKCEVGLLLAQREITLDCSWGS*GRSRVW
Trigger: CCAAACCCTTGAACGTCCTCAGGACCCCCAGGAGCA...ATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTTCTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397958.5
ENST00000513555.5
CDS-3UTR TCA 90 bp TTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATGGAGGAAGGTTTGTGCTCCTGGGGGTCCTaGGGACGTTCAAGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: LLLAQREITLDMAMEEGLCSWGS*GRSRVW
Trigger: CCAAACCCTTGAACGTCCTCAGGACCCCCAGGAGCA...CAAACCTTCCTCCATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397958.5
ENST00000513555.5
CDS-3UTR TCA 90 bp AGATATGGCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATGCACTGGGTGTTCTTaGGGACGAACCCATCGGGGC +
Preference number: 4 (lower is better)
Translates to: RYGYGGRFADSRVGSENQCTGCS*GRTHRG
Trigger: GCCCCGATGGGTTCGTCCTCAAGAACACCCAGTGCA...TTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGCCATATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp ATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATTGCACTGGGTGTTCTTaGGGACGAACCCATCGGGGC +
Preference number: 4 (lower is better)
Translates to: MRSRLALSTARDHSRYGYCTGCS*GRTHRG
Trigger: GCCCCGATGGGTTCGTCCTCAAGAACACCCAGTGCA...ATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp AGGAAGAAATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATTGCACTGGGTGTTCTTaGGGACGAACCCATCGGGGC +
Preference number: 4 (lower is better)
Translates to: RKKCEVGLLLAQREITLDCTGCS*GRTHRG
Trigger: GCCCCGATGGGTTCGTCCTCAAGAACACCCAGTGCA...ATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTTCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp TTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATTGCGATACGGAGCGCGTaGTGCTCTGCTTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LILCPWVVGSKFYLQSSIAIRSA*CSAWPG
Trigger: ACCTGGCCAAGCAGAGCATCACGCGCTCCGTATCGC...AATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp CAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCGTCCAATTGCACCGTAAATaGGTAACCTCTAAAGTATCA +
Preference number: 4 (lower is better)
Translates to: QRGGSSQSTPSLPHCRAVQLHRK*VTSKVS
Trigger: TGATACTTTAGAGGTTACTCATTTACGGTGCAATTG...GACGGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR TCA 90 bp GCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCTTACTACAGTGCACCTTGGGGAAGCTTTGGCACTaGTTTATTGCTCTTGAGTCA +
Preference number: 4 (lower is better)
Translates to: AAPRSRSVSPDTLLQCTLGKLWH*FIALES
Trigger: TGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCC...CAAGGTGCACTGTAGTAAGGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp ATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACCGTGGCTTCATTCTTaGAGTCAGCGAGACGAAGAA +
Preference number: 4 (lower is better)
Translates to: IKSTSTWKYRLGLCTVRTPWLHS*SQRDEE
Trigger: TTCTTCGTCTCGCTGACTTCAAGAATGAAGCCACGG...TGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR GCA 90 bp CTGTGCGCACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCTTGGTGCCCTTCTCTaGGAAATTGTTCCCCAACTT +
Preference number: 4 (lower is better)
Translates to: LCAHGLHLCLFRCAGKLWLGALL*EIVPQL
Trigger: AAGTTGGGGAACAATTTCGCAGAGAAGGGCACCAAG...CCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGCGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp TGCGCACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACCTTGGTGCCCTTCTCTaGGAAATTGTTCCCCAACTT +
Preference number: 4 (lower is better)
Translates to: CAHGLHLCLFRCAGKLWHLGALL*EIVPQL
Trigger: AAGTTGGGGAACAATTTCGCAGAGAAGGGCACCAAG...GTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp CGGTCTGTGTCTCCAGACACCTTACTACAGTGCACCTTGGCAGCAGTCAGCACTCTTGGTGCCCTTCTCTaGGAAATTGTTCCCCAACTT +
Preference number: 4 (lower is better)
Translates to: RSVSPDTLLQCTLAAVSTLGALL*EIVPQL
Trigger: AAGTTGGGGAACAATTTCGCAGAGAAGGGCACCAAG...AGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGGTGTCTGGAGACACAGACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp TATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACAAATCCTCCAGCAGCGGCTaGTTGGTGCCCTTCTCTGCG +
Preference number: 4 (lower is better)
Translates to: YGGRFADSRVGSENQFHKSSSSG*LVPFSA
Trigger: CGCAGAGAAGGGCACCAAGCAGCCGCTGCTGGAGGA...TTTGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp CTGTGTCTCCAGACACCTTACTACAGTGCACCTTGGCAGCAGTCAGCACTGTTACTATGGAGGAAGGTTTaGAGACAGCAGGGTCGGTTC +
Preference number: 4 (lower is better)
Translates to: LCLQTPYYSAPWQQSALLLWRKV*RQQGRF
Trigger: GAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAG...TAACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGGTGTCTGGAGACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp TGCGCACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTGGCCGAGGAAGAAATaGGAAGTAGGCTTGCTCTTA +
Preference number: 4 (lower is better)
Translates to: CAHGLHLCLFRCAGKLWHWPRKK*EVGLLL
Trigger: TAAGAGCAAGCCTACTTCGCATTTCTTCCTCGGCCA...GTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp AGGAAGAAATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATAATCCACACCGAGCCTaGCACATTGCAGGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: RKKCEVGLLLAQREITLDNPHRA*HIAGPS
Trigger: GGACGGCCCTGCAATGTGGCAGGCTCGGTGTGGATT...ATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTTCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp ATGCACTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAATCCACACCGAGCCTaGCACATTGCAGGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: MHLILCPWVVGSKFYLQSNPHRA*HIAGPS
Trigger: GGACGGCCCTGCAATGTGGCAGGCTCGGTGTGGATT...GCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAGTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp ATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATCACCCAGATGGGTGGTaGCCCTCCCTCCTTACCAAG +
Preference number: 4 (lower is better)
Translates to: MRSRLALSTARDHSRYGYHPDGW*PSLLTK
Trigger: CTTGGTAAGGAGGGAGGGGCACCACCCATCTGGGTG...ATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp AGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTAACACCACCCTGCAGGGAGAGTTCTaGACCTCACGGGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SFGTDLLLLSHFPQLNTTLQGEF*TSRAQG
Trigger: GCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAG...GGTGGTGTTAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp CTGTGCGCACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGTTGTGTCTATTCAGATaGGCAGGGAAGCTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: LCAHGLHLCLFRCAGKLWLCLFR*AGKLWH
Trigger: GTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAA...CCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGCGCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp TATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACAAATACAGGCTCGGCCTCTaGACTGTGCGCACACGGGCT +
Preference number: 4 (lower is better)
Translates to: YGGRFADSRVGSENQFHKYRLGL*TVRTRA
Trigger: AGCCCGTGTGCGCACAGTGCAGAGGCCGAGCCTGTA...TTTGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp ATGCACTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCACCTCCAACCCGTCCTaGCTGCAGGACTCACGGATG +
Preference number: 4 (lower is better)
Translates to: MHLILCPWVVGSKFYLQSTSNPS*LQDSRM
Trigger: CATCCGTGAGTCCTGCAGGCAGGACGGGTTGGAGGT...GCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAGTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CCA 90 bp ATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATGGACGTTCAAGGGTTTaGGGGGATGGGTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: MRSRLALSTARDHSRYGYGRSRV*GDGSRR
Trigger: CCTCCTGGACCCATCCCCCCAAACCCTTGAACGTCC...ATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CCA 90 bp ATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACAGTGAACTCAGCAATTTaGGGAGGACGTGCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: IKSTSTWKYRLGLCTVRTVNSAI*GGRAFP
Trigger: AGGGAAAGCACGTCCTCCCCAAATTGCTGAGTTCAC...TGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp TGCGCACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTACTACAGTGCACCTTaGCAGCAGTCAGCACTGTTA +
Preference number: 4 (lower is better)
Translates to: CAHGLHLCLFRCAGKLWHYYSAP*QQSALL
Trigger: TAACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTA...GTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp TGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTTGAGTCTGTCTCCACCCAGATaGGTGGTGCCCCTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: CVYSDAQGSFGTDLLLLSLSPPR*VVPLPP
Trigger: AGGAGGGAGGGGCACCACCCATCTGGGTGGAGACAG...ACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGCATCTGAATAGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR TCA 90 bp GCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACAGGAACTGCAGCTGATTaGCATCGAGGGGCGTCATCA +
Preference number: 4 (lower is better)
Translates to: AMEEGLQTAGSVQKINSTGTAAD*HRGASS
Trigger: TGATGACGCCCCTCGATGTCAATCAGCTGCAGTTCC...TGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp CACTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCGGAACTGCAGCTGATTaGCATCGAGGGGCGTCATCA +
Preference number: 4 (lower is better)
Translates to: HLILCPWVVGSKFYLQSSGTAAD*HRGASS
Trigger: TGATGACGCCCCTCGATGTCAATCAGCTGCAGTTCC...GCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp TCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTTGCCCATCCCGGCGGGAACTGCAGCTaGTTGACATCGAGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: SKSLCYLQVTHCKELAHPGGNCS*LTSRGV
Trigger: GACGCCCCTCGATGTCAATCAGCTGCAGTTCCCGCC...GGGATGGGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp TGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTTGCCGGAAGACGACGCAGGTaGGGAAGGCCAGGGCGAAGA +
Preference number: 4 (lower is better)
Translates to: CPSKSLCYLQVTHCKELAGRRRR*GRPGRR
Trigger: TCTTCGCCCTGGCCTTCCTCACCTGCGTCGTCTTCC...GGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp TCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTTGCCCATCCCGCGATACGGAGCGCGTaGTGCTCTGCTTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SKSLCYLQVTHCKELAHPAIRSA*CSAWPG
Trigger: ACCTGGCCAAGCAGAGCATCACGCGCTCCGTATCGC...GGGATGGGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp ATGCACTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCCCCATCCCGCTAAGCTaGCTTCTCAGCCGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: MHLILCPWVVGSKFYLQSPIPLS*LLSRFS
Trigger: ACTGAAGCGGCTGAGAAGTCAGCTTAGCGGGATGGG...GCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAGTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp AGGAAGAAATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATCCCATCCCGCTAAGCTaGCTTCTCAGCCGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: RKKCEVGLLLAQREITLDPIPLS*LLSRFS
Trigger: ACTGAAGCGGCTGAGAAGTCAGCTTAGCGGGATGGG...ATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTTCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp GCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACAAGCACTGTTACCCGCTaGTGGCCGAGGAAGAAATGC +
Preference number: 4 (lower is better)
Translates to: AMEEGLQTAGSVQKINSTSTVTR*WPRKKC
Trigger: GCATTTCTTCCTCGGCCATCAGCGGGTAACAGTGCT...TGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp GCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTAAACAAGAGTGGCGCTaGCCACGGTCACCATGCCTG +
Preference number: 4 (lower is better)
Translates to: AQGSFGTDLLLLSHFPQLKQEWR*PRSPCL
Trigger: CAGGCATGGTGACCGTGGTCAGCGCCACTCTTGTTT...AAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR TCA 90 bp CGGTCTGTGTCTCCAGACACCTTACTACAGTGCACCTTGGCAGCAGTCAGCACTGGGAAGCTTTGGCACTaGTTTATTGCTCTTGAGTCA +
Preference number: 4 (lower is better)
Translates to: RSVSPDTLLQCTLAAVSTGKLWH*FIALES
Trigger: TGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCC...AGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGGTGTCTGGAGACACAGACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp CAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGGTTTTCTTCCTCTGCTaGTTGTATCTGGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: QSIKSTSTWKYRLGLCTVVFFLC*LYLGPP
Trigger: TGGAGGGCCCAGATACAATCAGCAGAGGAAGAAAAC...CACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421177.6
CDS-3UTR GCA 90 bp AGATATGGCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAAGAGACCAGAGCAGGGTaGTCCTTAGTGCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: RYGYGGRFADSRVGSENQETRAG*SLVLGW
Trigger: CCAACCCAGCACTAAGGAGCACCCTGCTCTGGTCTC...TTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGCCATATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp AGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTAACACCACCTCCTCCAGCAGCGGCTaGTTGGTGCCCTTCTCTGCG +
Preference number: 4 (lower is better)
Translates to: SFGTDLLLLSHFPQLNTTSSSSG*LVPFSA
Trigger: CGCAGAGAAGGGCACCAAGCAGCCGCTGCTGGAGGA...GGTGGTGTTAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp CTGTGTCTCCAGACACCTTACTACAGTGCACCTTGGCAGCAGTCAGCACTGTTAGTGCTTTCCCTTTCTTaGGGTCAGGTTCATACTCGG +
Preference number: 4 (lower is better)
Translates to: LCLQTPYYSAPWQQSALLVLSLS*GQVHTR
Trigger: CCGAGTATGAACCTGACCGCAAGAAAGGGAAAGCAC...TAACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGGTGTCTGGAGACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp ACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTGATTATGCACTTGATTTTATaGCCGTGGGTGGTCGGCAGC +
Preference number: 4 (lower is better)
Translates to: TRASLVSIQMRREALALIMHLIL*PWVVGS
Trigger: GCTGCCGACCACCCACGGGCATAAAATCAAGTGCAT...AATCAGTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp CTCGTTCTCTATGCCACTTACTTACTACAGTGCACCTTGGCAGCAGTCAGCACTATGCACTTGATTTTATaGCCGTGGGTGGTCGGCAGC +
Preference number: 4 (lower is better)
Translates to: LVLYATYLLQCTLAAVSTMHLIL*PWVVGS
Trigger: GCTGCCGACCACCCACGGGCATAAAATCAAGTGCAT...AGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGTAAGTGGCATAGAGAACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp AGATATGGCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATCTGATGCACACCGCTaGGCCAAGGTCACGGTCTGT +
Preference number: 4 (lower is better)
Translates to: RYGYGGRFADSRVGSENQSDAHR*AKVTVC
Trigger: ACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGA...TTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGCCATATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp ATGAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTCTGATGCACACCGCTaGGCCAAGGTCACGGTCTGT +
Preference number: 4 (lower is better)
Translates to: MNSQSIKSTSTWKYRLGLSDAHR*AKVTVC
Trigger: ACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGA...GAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp TTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATTTCGGCCTCTGCACTGTaGGCACACGGGCTTCACTTG +
Preference number: 4 (lower is better)
Translates to: LILCPWVVGSKFYLQSSISASAL*AHGLHL
Trigger: CAAGTGAAGCCCGTGTGCGCACAGTGCAGAGGCCGA...AATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp GAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGAGAGAGGGTCCTGTTTaGAGACCTCCAACCCGTCCT +
Preference number: 4 (lower is better)
Translates to: EFTVNKVHVYLEIQARPLREGPV*RPPTRP
Trigger: AGGACGGGTTGGAGGTCTGCAAACAGGACCCTCTCT...CAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR GCA 90 bp TGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTTGCCGAGCTCCGCGTCTCCTaGTCCTGCTCGCAGCAATGG +
Preference number: 4 (lower is better)
Translates to: CPSKSLCYLQVTHCKELAELRVS*SCSQQW
Trigger: CCATTGCTGCGAGCAGGAGCAGGAGACGCGGAGCTC...GGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421177.6
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp CTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATCGGGAGCTCCGAGGCTaGAGCCTTTTTGGCACTTTG +
Preference number: 4 (lower is better)
Translates to: LDFMPVGGRQQVLFAKQHRELRG*SLFGTL
Trigger: CAAAGTGCCAAAAAGGCTGCAGCCTCGGAGCTCCCG...ATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505246.5
CDS-3UTR CCA 90 bp ATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATTTCCTCCGCTCTGGTTaGCAGAGAAGGTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: MRSRLALSTARDHSRYGYFLRSG*QRRWRS
Trigger: GGACCTCCACCTTCTCTGCCAACCAGAGCGGAGGAA...ATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CCA 90 bp TGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTTGCCGGAGGAGGTTTTCGGTaGTGCGGGAGGCGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: CPSKSLCYLQVTHCKELAGGGFR*CGRRSS
Trigger: GCTACTCCGCCTCCCGCACCACCGAAAACCTCCTCC...GGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CCA 90 bp AGGAAGAAATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATTCCTTAGTGCTGGGTTaGGGAGGGGGCGACCAAAAG +
Preference number: 4 (lower is better)
Translates to: RKKCEVGLLLAQREITLDSLVLG*GGGDQK
Trigger: CTTTTGGTCGCCCCCTCCCCAACCCAGCACTAAGGA...ATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTTCTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CCA 90 bp GCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTTCCTTAGTGCTGGGTTaGGGAGGGGGCGACCAAAAG +
Preference number: 4 (lower is better)
Translates to: AQGSFGTDLLLLSHFPQLSLVLG*GGGDQK
Trigger: CTTTTGGTCGCCCCCTCCCCAACCCAGCACTAAGGA...AAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CCA 90 bp CACTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATTTCTCCCGGGCACTaGAGTCTTGCTCCGCGTAGT +
Preference number: 4 (lower is better)
Translates to: HLILCPWVVGSKFYLQSSISPGH*SLAPRS
Trigger: ACTACGCGGAGCAAGACTCCAGTGCCCGGGAGAAAT...GCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp TTCTGTCTTAGAAGCACATTTCAGGAAACAAGAGTGGCGCTGACCACGGTCACCAAGTCCACGTCTACCTaGAAATACAGGCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: FCLRSTFQETRVALTTVTKSTST*KYRLGL
Trigger: GAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTT...GGTGACCGTGGTCAGCGCCACTCTTGTTTCCTGAAATGTGCTTCTAAGACAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CCA 90 bp ATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACAAGCTCCAAATTCCTCTaGCCTGCTCATTTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: IKSTSTWKYRLGLCTVRTSSKFL*PAHFPL
Trigger: GAGAGGAAAATGAGCAGGCCAGAGGAATTTGGAGCT...TGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421177.6
CDS-3UTR CCA 90 bp ATGCACTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAAAGACTATGGGGTGTaGGGGCGAGGCCGAAATGGG +
Preference number: 4 (lower is better)
Translates to: MHLILCPWVVGSKFYLQSKDYGV*GRGRNG
Trigger: CCCATTTCGGCCTCGCCCCCACACCCCATAGTCTTT...GCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAGTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR TCA 90 bp CTTTTTCCTCGTTCTCTATGCCACTTACTTACTACAGTGCACCTTGGCAGCAGTGGAACTGCAGCTGATTaGCATCGAGGGGCGTCATCA +
Preference number: 4 (lower is better)
Translates to: LFPRSLCHLLTTVHLGSSGTAAD*HRGASS
Trigger: TGATGACGCCCCTCGATGTCAATCAGCTGCAGTTCC...ACTGCTGCCAAGGTGCACTGTAGTAAGTAAGTGGCATAGAGAACGAGGAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR TCA 90 bp TGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTTGCCTGCACTGGGTGTTCTTaGGGACGAACCCATCGGGGC +
Preference number: 4 (lower is better)
Translates to: CPSKSLCYLQVTHCKELACTGCS*GRTHRG
Trigger: GCCCCGATGGGTTCGTCCTCAAGAACACCCAGTGCA...GGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp AGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTAACACCACCTGCACTGGGTGTTCTTaGGGACGAACCCATCGGGGC +
Preference number: 4 (lower is better)
Translates to: SFGTDLLLLSHFPQLNTTCTGCS*GRTHRG
Trigger: GCCCCGATGGGTTCGTCCTCAAGAACACCCAGTGCA...GGTGGTGTTAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp TTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATTCCCATCCCGCTAAGCTaGCTTCTCAGCCGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: LILCPWVVGSKFYLQSSIPIPLS*LLSRFS
Trigger: ACTGAAGCGGCTGAGAAGTCAGCTTAGCGGGATGGG...AATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp CTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGGGCTTCACTTGTGTCCTCTTTAGGCAATGCTaGAATGCACTTGATTTTATG +
Preference number: 4 (lower is better)
Translates to: LEIQARPLHCAHTGFTCVLFRQC*NALDFM
Trigger: CATAAAATCAAGTGCATTTCAGCATTGCCTAAAGAG...GACACAAGTGAAGCCCGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp CTTTTTCCTCGTTCTCTATGCCACTTACTTACTACAGTGCACCTTGGCAGCAGTAGCACTGTTACCCGCTaGTGGCCGAGGAAGAAATGC +
Preference number: 4 (lower is better)
Translates to: LFPRSLCHLLTTVHLGSSSTVTR*WPRKKC
Trigger: GCATTTCTTCCTCGGCCATCAGCGGGTAACAGTGCT...ACTGCTGCCAAGGTGCACTGTAGTAAGTAAGTGGCATAGAGAACGAGGAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR TCA 90 bp AAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGGCTGATTTATTGCTCTTaGGTCATTTTCCACAGCTTA +
Preference number: 4 (lower is better)
Translates to: KSTSTWKYRLGLCTVRTRLIYCS*VIFHSL
Trigger: TAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAG...CCGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp ATGAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCGCCGCTTCAGTCTCCTaGTCGGACAGCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: MNSQSIKSTSTWKYRLGLAASVS*SDSFSS
Trigger: AGAAGAGAAGCTGTCCGAGCAGGAGACTGAAGCGGC...GAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp AGGAAGAAATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATGCCGCTTCAGTCTCCTaGTCGGACAGCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: RKKCEVGLLLAQREITLDAASVS*SDSFSS
Trigger: AGAAGAGAAGCTGTCCGAGCAGGAGACTGAAGCGGC...ATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTTCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp ATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATGCCGCTTCAGTCTCCTaGTCGGACAGCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: MRSRLALSTARDHSRYGYAASVS*SDSFSS
Trigger: AGAAGAGAAGCTGTCCGAGCAGGAGACTGAAGCGGC...ATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp TTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATGGAGGAAGGTTTGGCCGCTTCAGTCTCCTaGTCGGACAGCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLLAQREITLDMAMEEGLAASVS*SDSFSS
Trigger: AGAAGAGAAGCTGTCCGAGCAGGAGACTGAAGCGGC...CAAACCTTCCTCCATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp ATGCACTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCGCCCTCTCCCTCACATaGTCTGCCAGTCTACACACA +
Preference number: 4 (lower is better)
Translates to: MHLILCPWVVGSKFYLQSALSLT*SASLHT
Trigger: TGTGTGTAGACTGGCAGAGCATGTGAGGGAGAGGGC...GCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAGTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp CTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATCCCCACAGCCTTTCCTaGCTGTTTCCCACATCAAGG +
Preference number: 4 (lower is better)
Translates to: LDFMPVGGRQQVLFAKQHPHSLS*LFPTSR
Trigger: CCTTGATGTGGGAAACAGGCAGGAAAGGCTGTGGGG...ATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp GAAGAAATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATTCTGATGCACACCGCTaGGCCAAGGTCACGGTCTGT +
Preference number: 4 (lower is better)
Translates to: EEMRSRLALSTARDHSRYSDAHR*AKVTVC
Trigger: ACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGA...ATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp AGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTAACACCACCTCGGCCTCTGCACTGTaGGCACACGGGCTTCACTTG +
Preference number: 4 (lower is better)
Translates to: SFGTDLLLLSHFPQLNTTSASAL*AHGLHL
Trigger: CAAGTGAAGCCCGTGTGCGCACAGTGCAGAGGCCGA...GGTGGTGTTAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp TATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACAAATCCTTAGTGCTGGGTTaGGGAGGGGGCGACCAAAAG +
Preference number: 4 (lower is better)
Translates to: YGGRFADSRVGSENQFHKSLVLG*GGGDQK
Trigger: CTTTTGGTCGCCCCCTCCCCAACCCAGCACTAAGGA...TTTGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CCA 90 bp CTAGATATGGCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCCCTTCTGGGATGCACTaGGTGTTCTTGAGGACGAAC +
Preference number: 4 (lower is better)
Translates to: LDMAMEEGLQTAGSVQKIPSGMH*VFLRTN
Trigger: GTTCGTCCTCAAGAACACCCAGTGCATCCCAGAAGG...GATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGCCATATCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp ATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATATTTCTCCCGGGCACTaGAGTCTTGCTCCGCGTAGT +
Preference number: 4 (lower is better)
Translates to: MRSRLALSTARDHSRYGYISPGH*SLAPRS
Trigger: ACTACGCGGAGCAAGACTCCAGTGCCCGGGAGAAAT...ATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp CTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATATTTCTCCCGGGCACTaGAGTCTTGCTCCGCGTAGT +
Preference number: 4 (lower is better)
Translates to: LDFMPVGGRQQVLFAKQHISPGH*SLAPRS
Trigger: ACTACGCGGAGCAAGACTCCAGTGCCCGGGAGAAAT...ATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp TTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATGGAGGAAGGTTTGATTTCTCCCGGGCACTaGAGTCTTGCTCCGCGTAGT +
Preference number: 4 (lower is better)
Translates to: LLLAQREITLDMAMEEGLISPGH*SLAPRS
Trigger: ACTACGCGGAGCAAGACTCCAGTGCCCGGGAGAAAT...CAAACCTTCCTCCATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp CTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATCTTGAACTCAGGAGGTaGAGGTTGTGGCGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LDFMPVGGRQQVLFAKQHLELRR*RLWRAE
Trigger: CTCAGCTCGCCACAACCTCCACCTCCTGAGTTCAAG...ATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421177.6
CDS-3UTR TCA 90 bp TCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTTGCCCATCCCCCCATCCCGCTAAGCTaGCTTCTCAGCCGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: SKSLCYLQVTHCKELAHPPIPLS*LLSRFS
Trigger: ACTGAAGCGGCTGAGAAGTCAGCTTAGCGGGATGGG...GGGATGGGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp AAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGCTCTTTAGGCAATGCTaGAATGCACTTGATTTTATG +
Preference number: 4 (lower is better)
Translates to: KVHVYLEIQARPLHCAHTLFRQC*NALDFM
Trigger: CATAAAATCAAGTGCATTTCAGCATTGCCTAAAGAG...CGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp CACGGTCTGTGTCTCCAGACACCTTACTACAGTGCACCTTGGCAGCAGTCAGCAATGAAGATCTTAACATaGAAAGTGGTGTCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: HGLCLQTPYYSAPWQQSAMKILT*KVVSEL
Trigger: GAGCTCTGACACCACTTTTCATGTTAAGATCTTCAT...TGCTGACTGCTGCCAAGGTGCACTGTAGTAAGGTGTCTGGAGACACAGACCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp CTGTGCGCACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCAAAATGCATTTATCTaGGATCCAAACCCTTCGCAT +
Preference number: 4 (lower is better)
Translates to: LCAHGLHLCLFRCAGKLWQNAFI*DPNPSH
Trigger: ATGCGAAGGGTTTGGATCTCAGATAAATGCATTTTG...CCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGCGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp ATCCCAGTAAAGGAGCTAAATGAAGATCTTAACATGAAAAGTGGTGTCAGAGCTGCAGCCTGGGGGTCCTaGGGACGTTCAAGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: IPVKELNEDLNMKSGVRAAAWGS*GRSRVW
Trigger: CCAAACCCTTGAACGTCCTCAGGACCCCCAGGCTGC...AGCTCTGACACCACTTTTCATGTTAAGATCTTCATTTAGCTCCTTTACTGGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433139.6
CDS-3UTR GCA 90 bp CACTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCGTGCTTTCCCTTTCTTaGGGTCAGGTTCATACTCGG +
Preference number: 4 (lower is better)
Translates to: HLILCPWVVGSKFYLQSSVLSLS*GQVHTR
Trigger: CCGAGTATGAACCTGACCGCAAGAAAGGGAAAGCAC...GCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp CACTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCAATTTGGGGAGGACGTaGTTTCCCTTTCTTGCGGTC +
Preference number: 4 (lower is better)
Translates to: HLILCPWVVGSKFYLQSSNLGRT*FPFLAV
Trigger: GACCGCAAGAAAGGGAAAGCACGTCCTCCCCAAATT...GCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp TTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATTGCCGCTTCAGTCTCCTaGTCGGACAGCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LILCPWVVGSKFYLQSSIAASVS*SDSFSS
Trigger: AGAAGAGAAGCTGTCCGAGCAGGAGACTGAAGCGGC...AATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp ATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATATGCACTTGATTTTATaGCCGTGGGTGGTCGGCAGC +
Preference number: 4 (lower is better)
Translates to: MRSRLALSTARDHSRYGYMHLIL*PWVVGS
Trigger: GCTGCCGACCACCCACGGGCATAAAATCAAGTGCAT...ATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp AGATATGGCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAAATGCACTTGATTTTATaGCCGTGGGTGGTCGGCAGC +
Preference number: 4 (lower is better)
Translates to: RYGYGGRFADSRVGSENQMHLIL*PWVVGS
Trigger: GCTGCCGACCACCCACGGGCATAAAATCAAGTGCAT...TTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGCCATATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp TTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATGGAGGAAGGTTTGCTATGGAGGAAGGTTTaGAGACAGCAGGGTCGGTTC +
Preference number: 4 (lower is better)
Translates to: LLLAQREITLDMAMEEGLLWRKV*RQQGRF
Trigger: GAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAG...CAAACCTTCCTCCATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp ACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTGATTTGGCCGAGGAAGAAATaGGAAGTAGGCTTGCTCTTA +
Preference number: 4 (lower is better)
Translates to: TRASLVSIQMRREALALIWPRKK*EVGLLL
Trigger: TAAGAGCAAGCCTACTTCGCATTTCTTCCTCGGCCA...AATCAGTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp ATGCACTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCCTCCCTCACATGCTCTaGCAGTCTACACACACTGGA +
Preference number: 4 (lower is better)
Translates to: MHLILCPWVVGSKFYLQSLPHML*QSTHTG
Trigger: TCCAGTGTGTGTAGACTGGCAGAGCATGTGAGGGAG...GCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAGTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp TTCTCTATGCCACTTACTTACTACAGTGCACCTTGGCAGCAGTCAGCACTGTTAAGCAGACAGACTACCTaGAGGGAGAGTTCTGCACCT +
Preference number: 4 (lower is better)
Translates to: FSMPLTYYSAPWQQSALLSRQTT*RESSAP
Trigger: AGGTGCAGAACTCTCCCTGCAGGTAGTCTGTCTGCT...TAACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGTAAGTGGCATAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp CTTTTTCCTCGTTCTCTATGCCACTTACTTACTACAGTGCACCTTGGCAGCAGTAGCAGACAGACTACCTaGAGGGAGAGTTCTGCACCT +
Preference number: 4 (lower is better)
Translates to: LFPRSLCHLLTTVHLGSSSRQTT*RESSAP
Trigger: AGGTGCAGAACTCTCCCTGCAGGTAGTCTGTCTGCT...ACTGCTGCCAAGGTGCACTGTAGTAAGTAAGTGGCATAGAGAACGAGGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp TGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTTGAGTCCCCACAGCCTTTCCTaGCTGTTTCCCACATCAAGG +
Preference number: 4 (lower is better)
Translates to: CVYSDAQGSFGTDLLLLSPHSLS*LFPTSR
Trigger: CCTTGATGTGGGAAACAGGCAGGAAAGGCTGTGGGG...ACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGCATCTGAATAGACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp GAAGAAATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATCCCCACAGCCTTTCCTaGCTGTTTCCCACATCAAGG +
Preference number: 4 (lower is better)
Translates to: EEMRSRLALSTARDHSRYPHSLS*LFPTSR
Trigger: CCTTGATGTGGGAAACAGGCAGGAAAGGCTGTGGGG...ATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp TGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTTGAGTATTTTGTTTGCACGGTaGCACACCAGTCCCCCACCC +
Preference number: 4 (lower is better)
Translates to: CVYSDAQGSFGTDLLLLSILFAR*HTSPPP
Trigger: GGGTGGGGGACTGGTGTGGCACCGTGCAAACAAAAT...ACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGCATCTGAATAGACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp ACTAATGGGGCTATTGGTGCAAATTTATTCATAATAGAAGTGAACCAGAGGGCCTCGGCCTCTGCACTGTaGGCACACGGGCTTCACTTG +
Preference number: 4 (lower is better)
Translates to: TNGAIGANLFIIEVNQRASASAL*AHGLHL
Trigger: CAAGTGAAGCCCGTGTGCGCACAGTGCAGAGGCCGA...GGCCCTCTGGTTCACTTCTATTATGAATAAATTTGCACCAATAGCCCCATTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp ACTAATGGGGCTATTGGTGCAAATTTATTCATAATAGAAGTGAACCAGAGGGCCACCTCCAACCCGTCCTaGCTGCAGGACTCACGGATG +
Preference number: 4 (lower is better)
Translates to: TNGAIGANLFIIEVNQRATSNPS*LQDSRM
Trigger: CATCCGTGAGTCCTGCAGGCAGGACGGGTTGGAGGT...GGCCCTCTGGTTCACTTCTATTATGAATAAATTTGCACCAATAGCCCCATTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CCA 90 bp GAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGGTGAACTCAGCAATTTaGGGAGGACGTGCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: EFTVNKVHVYLEIQARPLVNSAI*GGRAFP
Trigger: AGGGAAAGCACGTCCTCCCCAAATTGCTGAGTTCAC...CAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp CTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATCCTTCTGGGATGCACTaGGTGTTCTTGAGGACGAAC +
Preference number: 4 (lower is better)
Translates to: LDFMPVGGRQQVLFAKQHPSGMH*VFLRTN
Trigger: GTTCGTCCTCAAGAACACCCAGTGCATCCCAGAAGG...ATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp ATGAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCCCTTCTGGGATGCACTaGGTGTTCTTGAGGACGAAC +
Preference number: 4 (lower is better)
Translates to: MNSQSIKSTSTWKYRLGLPSGMH*VFLRTN
Trigger: GTTCGTCCTCAAGAACACCCAGTGCATCCCAGAAGG...GAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp ATGAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCGCTCTCCAAGCCTTCTaGGATGCACTGGGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: MNSQSIKSTSTWKYRLGLALQAF*DALGVL
Trigger: AAGAACACCCAGTGCATCCCAGAAGGCTTGGAGAGC...GAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp GCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTGCTCTCCAAGCCTTCTaGGATGCACTGGGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: AQGSFGTDLLLLSHFPQLALQAF*DALGVL
Trigger: AAGAACACCCAGTGCATCCCAGAAGGCTTGGAGAGC...AAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp TATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACAAAATTTCTCCCGGGCACTaGAGTCTTGCTCCGCGTAGT +
Preference number: 4 (lower is better)
Translates to: YGGRFADSRVGSENQFHKISPGH*SLAPRS
Trigger: ACTACGCGGAGCAAGACTCCAGTGCCCGGGAGAAAT...TTTGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp CAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGTTTTATGCCCGTGGGTaGTCGGCAGCAAGTTTTATT +
Preference number: 4 (lower is better)
Translates to: QSIKSTSTWKYRLGLCTVFYARG*SAASFI
Trigger: AATAAAACTTGCTGCCGACCACCCACGGGCATAAAA...CACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp CTCGTTCTCTATGCCACTTACTTACTACAGTGCACCTTGGCAGCAGTCAGCACTTACTACAGTGCACCTTaGCAGCAGTCAGCACTGTTA +
Preference number: 4 (lower is better)
Translates to: LVLYATYLLQCTLAAVSTYYSAP*QQSALL
Trigger: TAACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTA...AGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGTAAGTGGCATAGAGAACGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CCA 90 bp ATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACAGACTGTTTCATCCTGTaGTTTTCTTCCTCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: IKSTSTWKYRLGLCTVRTDCFIL*FSSSAD
Trigger: ATCAGCAGAGGAAGAAAACCACAGGATGAAACAGTC...TGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421177.6
CDS-3UTR CCA 90 bp AGGAAGAAATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATGTCTTGGGTCTTCACTaGTGCTGGTCATTGGGACTG +
Preference number: 4 (lower is better)
Translates to: RKKCEVGLLLAQREITLDVLGLH*CWSLGL
Trigger: CAGTCCCAATGACCAGCACCAGTGAAGACCCAAGAC...ATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTTCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421177.6
3UTR CAA 72 bp TGGTGTCAGAGCTCTTTAGGCAATGCTGAAATGCACTaGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: WCQSSLGNAEMH*ILCPWVVGSKF
Trigger: AAACTTGCTGCCGACCACCCACGGGCATAAAATCAAGTGCATTTCAGCATTGCCTAAAGAGCTCTGACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp GGTCTGTGTCTCCAGACACCTTACTACAGTGCACCTTGGCAGCAGTCAGCACTGCAATTGCACCGTAAATaGGTAACCTCTAAAGTATCA +
Preference number: 4 (lower is better)
Translates to: GLCLQTPYYSAPWQQSALQLHRK*VTSKVS
Trigger: TGATACTTTAGAGGTTACTCATTTACGGTGCAATTG...CAGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGGTGTCTGGAGACACAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp GTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATGGAGGAAATGCTGAAATGCACTTaGTTTTATGCCCGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: VGLLLAQREITLDMAMEEMLKCT*FYARGW
Trigger: CCACCCACGGGCATAAAATCAAGTGCATTTCAGCAT...TTCCTCCATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp GGTCTGTGTCTCCAGACACCTTACTACAGTGCACCTTGGCAGCAGTCAGCACTGCTCTTTAGGCAATGCTaGAATGCACTTGATTTTATG +
Preference number: 4 (lower is better)
Translates to: GLCLQTPYYSAPWQQSALLFRQC*NALDFM
Trigger: CATAAAATCAAGTGCATTTCAGCATTGCCTAAAGAG...CAGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGGTGTCTGGAGACACAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp ATGAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCCCGTGGCTTCATTCTTaGAGTCAGCGAGACGAAGAA +
Preference number: 4 (lower is better)
Translates to: MNSQSIKSTSTWKYRLGLPWLHS*SQRDEE
Trigger: TTCTTCGTCTCGCTGACTTCAAGAATGAAGCCACGG...GAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR TCA 90 bp TTCTCTATGCCACTTACTTACTACAGTGCACCTTGGCAGCAGTCAGCACTGTTACCCAGAGATGGACGGTaGACAATCATGTTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: FSMPLTYYSAPWQQSALLPRDGR*TIMFLC
Trigger: GCAGAGAAACATGATTGTTCACCGTCCATCTCTGGG...TAACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGTAAGTGGCATAGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421177.6
CDS-3UTR GCA 90 bp GAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCTTGGTGCCCTTCTCTaGGAAATTGTTCCCCAACTT +
Preference number: 4 (lower is better)
Translates to: EFTVNKVHVYLEIQARPLLGALL*EIVPQL
Trigger: AAGTTGGGGAACAATTTCGCAGAGAAGGGCACCAAG...CAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp ATGAAATGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAATCCTCCAGCAGCGGCTaGTTGGTGCCCTTCTCTGCG +
Preference number: 4 (lower is better)
Translates to: MKCPSKSLCYLQVTHCKESSSSG*LVPFSA
Trigger: CGCAGAGAAGGGCACCAAGCAGCCGCTGCTGGAGGA...TTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACATTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp TTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATGGAGGAAGGTTTGGTGCTTTCCCTTTCTTaGGGTCAGGTTCATACTCGG +
Preference number: 4 (lower is better)
Translates to: LLLAQREITLDMAMEEGLVLSLS*GQVHTR
Trigger: CCGAGTATGAACCTGACCGCAAGAAAGGGAAAGCAC...CAAACCTTCCTCCATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp AGATATGGCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAAAATTTGGGGAGGACGTaGTTTCCCTTTCTTGCGGTC +
Preference number: 4 (lower is better)
Translates to: RYGYGGRFADSRVGSENQNLGRT*FPFLAV
Trigger: GACCGCAAGAAAGGGAAAGCACGTCCTCCCCAAATT...TTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGCCATATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp GGAAGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTAACACCGCCGCTTCAGTCTCCTaGTCGGACAGCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GSFGTDLLLLSHFPQLNTAASVS*SDSFSS
Trigger: AGAAGAGAAGCTGTCCGAGCAGGAGACTGAAGCGGC...GGTGTTAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp TATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACAAAATGCACTTGATTTTATaGCCGTGGGTGGTCGGCAGC +
Preference number: 4 (lower is better)
Translates to: YGGRFADSRVGSENQFHKMHLIL*PWVVGS
Trigger: GCTGCCGACCACCCACGGGCATAAAATCAAGTGCAT...TTTGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp GAAGAAATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATCTATGGAGGAAGGTTTaGAGACAGCAGGGTCGGTTC +
Preference number: 4 (lower is better)
Translates to: EEMRSRLALSTARDHSRYLWRKV*RQQGRF
Trigger: GAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAG...ATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp TATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACAAACTATGGAGGAAGGTTTaGAGACAGCAGGGTCGGTTC +
Preference number: 4 (lower is better)
Translates to: YGGRFADSRVGSENQFHKLWRKV*RQQGRF
Trigger: GAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAG...TTTGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp CTAGATATGGCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCTGGCCGAGGAAGAAATaGGAAGTAGGCTTGCTCTTA +
Preference number: 4 (lower is better)
Translates to: LDMAMEEGLQTAGSVQKIWPRKK*EVGLLL
Trigger: TAAGAGCAAGCCTACTTCGCATTTCTTCCTCGGCCA...GATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGCCATATCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp TGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTTGAGTCTCCCTCACATGCTCTaGCAGTCTACACACACTGGA +
Preference number: 4 (lower is better)
Translates to: CVYSDAQGSFGTDLLLLSLPHML*QSTHTG
Trigger: TCCAGTGTGTGTAGACTGGCAGAGCATGTGAGGGAG...ACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGCATCTGAATAGACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp TGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTTGCCATTTTGTTTGCACGGTaGCACACCAGTCCCCCACCC +
Preference number: 4 (lower is better)
Translates to: CPSKSLCYLQVTHCKELAILFAR*HTSPPP
Trigger: GGGTGGGGGACTGGTGTGGCACCGTGCAAACAAAAT...GGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp CTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATCTAGCTGGCCTTTTGTaGTGTCTTGGGTCTTCACTG +
Preference number: 4 (lower is better)
Translates to: LDFMPVGGRQQVLFAKQHLAGLL*CLGSSL
Trigger: CAGTGAAGACCCAAGACAGCACAAAAGGCCAGCTAG...ATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000505246.5
CDS-3UTR CCA 90 bp GGAAGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTAACACCAAGGTTCCTCCGCTCTaGTTGGCAGAGAAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: GSFGTDLLLLSHFPQLNTKVPPL*LAEKVE
Trigger: CTCCACCTTCTCTGCCAACCAGAGCGGAGGAACCTT...GGTGTTAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CCA 90 bp TTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATGGAGGAAGGTTTGGTGAACTCAGCAATTTaGGGAGGACGTGCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: LLLAQREITLDMAMEEGLVNSAI*GGRAFP
Trigger: AGGGAAAGCACGTCCTCCCCAAATTGCTGAGTTCAC...CAAACCTTCCTCCATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp CTAGATATGGCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCTTGATTTTATGCCCGTaGGTGGTCGGCAGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: LDMAMEEGLQTAGSVQKILILCP*VVGSKF
Trigger: AAACTTGCTGCCGACCACCCACGGGCATAAAATCAA...GATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGCCATATCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp GCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACATTGATTTTATGCCCGTaGGTGGTCGGCAGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: AMEEGLQTAGSVQKINSTLILCP*VVGSKF
Trigger: AAACTTGCTGCCGACCACCCACGGGCATAAAATCAA...TGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp TTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATTAAGTCCACGTCTACCTaGAAATACAGGCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: LILCPWVVGSKFYLQSSIKSTST*KYRLGL
Trigger: GAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTT...AATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp GAAGAAATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATAAGTCCACGTCTACCTaGAAATACAGGCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: EEMRSRLALSTARDHSRYKSTST*KYRLGL
Trigger: GAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTT...ATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp GGAAGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTAACACCGGCCCTCCAAGATGCTaGCAGCTCCAAATTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GSFGTDLLLLSHFPQLNTGPPRC*QLQIPL
Trigger: CAGAGGAATTTGGAGCTGCCAGCATCTTGGAGGGCC...GGTGTTAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421177.6
CDS-3UTR TCA 90 bp ATGAAATGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAATGCACTGGGTGTTCTTaGGGACGAACCCATCGGGGC +
Preference number: 4 (lower is better)
Translates to: MKCPSKSLCYLQVTHCKECTGCS*GRTHRG
Trigger: GCCCCGATGGGTTCGTCCTCAAGAACACCCAGTGCA...TTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACATTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp CAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGGGTTGTAGTGGTTTATaGCTGTGTAAAATTTCTCCC +
Preference number: 4 (lower is better)
Translates to: QSIKSTSTWKYRLGLCTVGCSGL*LCKISP
Trigger: GGGAGAAATTTTACACAGTCATAAACCACTACAACC...CACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp TTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATGGAGGAAGGTTTGATGCTGAAATGCACTTaGTTTTATGCCCGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LLLAQREITLDMAMEEGLMLKCT*FYARGW
Trigger: CCACCCACGGGCATAAAATCAAGTGCATTTCAGCAT...CAAACCTTCCTCCATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp TTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATTCCCAGAGATGGACGGTaGACAATCATGTTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LILCPWVVGSKFYLQSSIPRDGR*TIMFLC
Trigger: GCAGAGAAACATGATTGTTCACCGTCCATCTCTGGG...AATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000505246.5
CDS-3UTR GCA 90 bp TATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACAAAGTGCTTTCCCTTTCTTaGGGTCAGGTTCATACTCGG +
Preference number: 4 (lower is better)
Translates to: YGGRFADSRVGSENQFHKVLSLS*GQVHTR
Trigger: CCGAGTATGAACCTGACCGCAAGAAAGGGAAAGCAC...TTTGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp GTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATGGAGGAAATTTGTCATTTTGTTTaGACGGTGCCACACCAGTCC +
Preference number: 4 (lower is better)
Translates to: VGLLLAQREITLDMAMEEICHFV*TVPHQS
Trigger: GGACTGGTGTGGCACCGTGCAAACAAAATGACAAAT...TTCCTCCATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp TTCTCTATGCCACTTACTTACTACAGTGCACCTTGGCAGCAGTCAGCACTGTTATTGTGTCTATTCAGATaGGCAGGGAAGCTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: FSMPLTYYSAPWQQSALLLCLFR*AGKLWH
Trigger: GTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAA...TAACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGTAAGTGGCATAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CCA 90 bp ATGAAATGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAAGGACGTTCAAGGGTTTaGGGGGATGGGTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: MKCPSKSLCYLQVTHCKEGRSRV*GDGSRR
Trigger: CCTCCTGGACCCATCCCCCCAAACCCTTGAACGTCC...TTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACATTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CCA 90 bp TCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTTGCCCATCCCGCTCTCCAAGCCTTCTaGGATGCACTGGGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: SKSLCYLQVTHCKELAHPALQAF*DALGVL
Trigger: AAGAACACCCAGTGCATCCCAGAAGGCTTGGAGAGC...GGGATGGGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp TGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTTGCCGCTCTCCAAGCCTTCTaGGATGCACTGGGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: CPSKSLCYLQVTHCKELAALQAF*DALGVL
Trigger: AAGAACACCCAGTGCATCCCAGAAGGCTTGGAGAGC...GGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp ATGCACTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCTACTACAGTGCACCTTaGCAGCAGTCAGCACTGTTA +
Preference number: 4 (lower is better)
Translates to: MHLILCPWVVGSKFYLQSYYSAP*QQSALL
Trigger: TAACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTA...GCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp ATGAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTACTACAGTGCACCTTaGCAGCAGTCAGCACTGTTA +
Preference number: 4 (lower is better)
Translates to: MNSQSIKSTSTWKYRLGLYYSAP*QQSALL
Trigger: TAACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTA...GAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp AGATATGGCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATACTACAGTGCACCTTaGCAGCAGTCAGCACTGTTA +
Preference number: 4 (lower is better)
Translates to: RYGYGGRFADSRVGSENQYYSAP*QQSALL
Trigger: TAACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTA...TTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGCCATATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp TGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTTGCCGTCTTGGGTCTTCACTaGTGCTGGTCATTGGGACTG +
Preference number: 4 (lower is better)
Translates to: CPSKSLCYLQVTHCKELAVLGLH*CWSLGL
Trigger: CAGTCCCAATGACCAGCACCAGTGAAGACCCAAGAC...GGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000505246.5
CDS-3UTR CCA 90 bp TATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACAAACCTTTTGTGCTGTCTTaGGTCTTCACTGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: YGGRFADSRVGSENQFHKPFVLS*VFTGAG
Trigger: ACCAGCACCAGTGAAGACCCAAGACAGCACAAAAGG...TTTGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421177.6
3UTR CAA 72 bp CGAGAGATCACTCTAGATATGGCTATGGAGGAAGGTTaGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCC +
Preference number: 4 (lower is better)
Translates to: REITLDMAMEEG*QTAGSVQKINS
Trigger: GGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGCCATATCTAGAGTGATCTCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR CAA 72 bp GATGCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTaGAGTCATTTTCCACAGCTTAACACCACCCTTCTC +
Preference number: 4 (lower is better)
Translates to: DAQGSFGTDLLL*SHFPQLNTTLL
Trigger: GAGAAGGGTGGTGTTAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp ATGAAATGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACCCATCCCGCTAAGCTaGCTTCTCAGCCGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: MKCPSKSLCYLQVTHCKEPIPLS*LLSRFS
Trigger: ACTGAAGCGGCTGAGAAGTCAGCTTAGCGGGATGGG...TTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACATTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp TATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACAAAATGCTGAAATGCACTTaGTTTTATGCCCGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: YGGRFADSRVGSENQFHKMLKCT*FYARGW
Trigger: CCACCCACGGGCATAAAATCAAGTGCATTTCAGCAT...TTTGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp CTCGTTCTCTATGCCACTTACTTACTACAGTGCACCTTGGCAGCAGTCAGCACTCAAAATGCATTTATCTaGGATCCAAACCCTTCGCAT +
Preference number: 4 (lower is better)
Translates to: LVLYATYLLQCTLAAVSTQNAFI*DPNPSH
Trigger: ATGCGAAGGGTTTGGATCTCAGATAAATGCATTTTG...AGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGTAAGTGGCATAGAGAACGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR TCA 90 bp CAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCTGATTTATTGCTCTTaGGTCATTTTCCACAGCTTA +
Preference number: 4 (lower is better)
Translates to: QSIKSTSTWKYRLGLCTVLIYCS*VIFHSL
Trigger: TAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAG...CACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp ATGCACTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCGGGAAGCTTTGGCACTaGTTTATTGCTCTTGAGTCA +
Preference number: 4 (lower is better)
Translates to: MHLILCPWVVGSKFYLQSGKLWH*FIALES
Trigger: TGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCC...GCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp CTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATGGGAAGCTTTGGCACTaGTTTATTGCTCTTGAGTCA +
Preference number: 4 (lower is better)
Translates to: LDFMPVGGRQQVLFAKQHGKLWH*FIALES
Trigger: TGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCC...ATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp ATCCCAGTAAAGGAGCTAAATGAAGATCTTAACATGAAAAGTGGTGTCAGAGCTTGCAGGACTCACGGATaGAAGACTATGGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: IPVKELNEDLNMKSGVRACRTHG*KTMGCG
Trigger: CCCACACCCCATAGTCTTTCATCCGTGAGTCCTGCA...AGCTCTGACACCACTTTTCATGTTAAGATCTTCATTTAGCTCCTTTACTGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR GCA 90 bp GAAGAAATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATCTTGGTGCCCTTCTCTaGGAAATTGTTCCCCAACTT +
Preference number: 4 (lower is better)
Translates to: EEMRSRLALSTARDHSRYLGALL*EIVPQL
Trigger: AAGTTGGGGAACAATTTCGCAGAGAAGGGCACCAAG...ATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp TCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTTGCCCATCCCAATTTGGGGAGGACGTaGTTTCCCTTTCTTGCGGTC +
Preference number: 4 (lower is better)
Translates to: SKSLCYLQVTHCKELAHPNLGRT*FPFLAV
Trigger: GACCGCAAGAAAGGGAAAGCACGTCCTCCCCAAATT...GGGATGGGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp ATCCCAGTAAAGGAGCTAAATGAAGATCTTAACATGAAAAGTGGTGTCAGAGCTGCCGCTTCAGTCTCCTaGTCGGACAGCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: IPVKELNEDLNMKSGVRAAASVS*SDSFSS
Trigger: AGAAGAGAAGCTGTCCGAGCAGGAGACTGAAGCGGC...AGCTCTGACACCACTTTTCATGTTAAGATCTTCATTTAGCTCCTTTACTGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp TATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACAAAACTTACTTACTACAGTaGACCTTGGCAGCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: YGGRFADSRVGSENQFHKTYLLQ*TLAAVS
Trigger: GCTGACTGCTGCCAAGGTGCACTGTAGTAAGTAAGT...TTTGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp TTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATTACTTACTTACTACAGTaGACCTTGGCAGCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: LILCPWVVGSKFYLQSSITYLLQ*TLAAVS
Trigger: GCTGACTGCTGCCAAGGTGCACTGTAGTAAGTAAGT...AATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp ATCCCAGTAAAGGAGCTAAATGAAGATCTTAACATGAAAAGTGGTGTCAGAGCTAGAGAGGGTCCTGTTTaGAGACCTCCAACCCGTCCT +
Preference number: 4 (lower is better)
Translates to: IPVKELNEDLNMKSGVRAREGPV*RPPTRP
Trigger: AGGACGGGTTGGAGGTCTGCAAACAGGACCCTCTCT...AGCTCTGACACCACTTTTCATGTTAAGATCTTCATTTAGCTCCTTTACTGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CCA 90 bp ATGAAATGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAATTCCTCCGCTCTGGTTaGCAGAGAAGGTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: MKCPSKSLCYLQVTHCKEFLRSG*QRRWRS
Trigger: GGACCTCCACCTTCTCTGCCAACCAGAGCGGAGGAA...TTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACATTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CCA 90 bp ACTAATGGGGCTATTGGTGCAAATTTATTCATAATAGAAGTGAACCAGAGGGCCGCTCTCCAAGCCTTCTaGGATGCACTGGGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: TNGAIGANLFIIEVNQRAALQAF*DALGVL
Trigger: AAGAACACCCAGTGCATCCCAGAAGGCTTGGAGAGC...GGCCCTCTGGTTCACTTCTATTATGAATAAATTTGCACCAATAGCCCCATTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CCA 90 bp ATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATTTTTATGCCCGTGGGTaGTCGGCAGCAAGTTTTATT +
Preference number: 4 (lower is better)
Translates to: MRSRLALSTARDHSRYGYFYARG*SAASFI
Trigger: AATAAAACTTGCTGCCGACCACCCACGGGCATAAAA...ATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp TTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATGGAGGAAGGTTTGTTTTATGCCCGTGGGTaGTCGGCAGCAAGTTTTATT +
Preference number: 4 (lower is better)
Translates to: LLLAQREITLDMAMEEGLFYARG*SAASFI
Trigger: AATAAAACTTGCTGCCGACCACCCACGGGCATAAAA...CAAACCTTCCTCCATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp TATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACAAATTGATTTTATGCCCGTaGGTGGTCGGCAGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: YGGRFADSRVGSENQFHKLILCP*VVGSKF
Trigger: AAACTTGCTGCCGACCACCCACGGGCATAAAATCAA...TTTGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp TTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATTTTGATTTTATGCCCGTaGGTGGTCGGCAGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: LILCPWVVGSKFYLQSSILILCP*VVGSKF
Trigger: AAACTTGCTGCCGACCACCCACGGGCATAAAATCAA...AATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp ATCCCAGTAAAGGAGCTAAATGAAGATCTTAACATGAAAAGTGGTGTCAGAGCTGACACACCAGCACTTTaGGAGGCCAAGACCAGCAGA +
Preference number: 4 (lower is better)
Translates to: IPVKELNEDLNMKSGVRADTPAL*EAKTSR
Trigger: TCTGCTGGTCTTGGCCTCCCAAAGTGCTGGTGTGTC...AGCTCTGACACCACTTTTCATGTTAAGATCTTCATTTAGCTCCTTTACTGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CCA 90 bp TGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTTGCCACTGGTGCTGGTCATTaGGACTGTTTCATCCTGTGG +
Preference number: 4 (lower is better)
Translates to: CPSKSLCYLQVTHCKELATGAGH*DCFILW
Trigger: CCACAGGATGAAACAGTCCCAATGACCAGCACCAGT...GGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000505246.5
CDS-3UTR CCA 90 bp TGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTTGAGTTGTTTCTCTGCTAGCTaGCCTTTTGTGCTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: CVYSDAQGSFGTDLLLLSCFSAS*PFVLSW
Trigger: CCAAGACAGCACAAAAGGCCAGCTAGCAGAGAAACA...ACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGCATCTGAATAGACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421177.6
CDS-3UTR TCA 90 bp GAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGGGTTGTAGTGGTTTATaGCTGTGTAAAATTTCTCCC +
Preference number: 4 (lower is better)
Translates to: EFTVNKVHVYLEIQARPLGCSGL*LCKISP
Trigger: GGGAGAAATTTTACACAGTCATAAACCACTACAACC...CAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp TGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTTGCCATGCTGAAATGCACTTaGTTTTATGCCCGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: CPSKSLCYLQVTHCKELAMLKCT*FYARGW
Trigger: CCACCCACGGGCATAAAATCAAGTGCATTTCAGCAT...GGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp GTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATGGAGGAAATGAAGATCTTAACATaGAAAGTGGTGTCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: VGLLLAQREITLDMAMEEMKILT*KVVSEL
Trigger: GAGCTCTGACACCACTTTTCATGTTAAGATCTTCAT...TTCCTCCATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp CACTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCCAAAATGCATTTATCTaGGATCCAAACCCTTCGCAT +
Preference number: 4 (lower is better)
Translates to: HLILCPWVVGSKFYLQSSQNAFI*DPNPSH
Trigger: ATGCGAAGGGTTTGGATCTCAGATAAATGCATTTTG...GCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp GGAAGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTAACACCTGGCCGAGGAAGAAATaGGAAGTAGGCTTGCTCTTA +
Preference number: 4 (lower is better)
Translates to: GSFGTDLLLLSHFPQLNTWPRKK*EVGLLL
Trigger: TAAGAGCAAGCCTACTTCGCATTTCTTCCTCGGCCA...GGTGTTAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp GAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGTTTCCTCGTTCTCTATaGCACTTACTTACTACAGTG +
Preference number: 4 (lower is better)
Translates to: EFTVNKVHVYLEIQARPLFPRSL*HLLTTV
Trigger: CACTGTAGTAAGTAAGTGGCATAGAGAACGAGGAAA...CAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS-3UTR GCA 90 bp TGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTTGAGTATTTGTCATTTTGTTTaGACGGTGCCACACCAGTCC +
Preference number: 4 (lower is better)
Translates to: CVYSDAQGSFGTDLLLLSICHFV*TVPHQS
Trigger: GGACTGGTGTGGCACCGTGCAAACAAAATGACAAAT...ACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGCATCTGAATAGACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp TATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACAAAATTTGTCATTTTGTTTaGACGGTGCCACACCAGTCC +
Preference number: 4 (lower is better)
Translates to: YGGRFADSRVGSENQFHKICHFV*TVPHQS
Trigger: GGACTGGTGTGGCACCGTGCAAACAAAATGACAAAT...TTTGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CCA 90 bp ATCCCAGTAAAGGAGCTAAATGAAGATCTTAACATGAAAAGTGGTGTCAGAGCTCCTTCTGGGATGCACTaGGTGTTCTTGAGGACGAAC +
Preference number: 4 (lower is better)
Translates to: IPVKELNEDLNMKSGVRAPSGMH*VFLRTN
Trigger: GTTCGTCCTCAAGAACACCCAGTGCATCCCAGAAGG...AGCTCTGACACCACTTTTCATGTTAAGATCTTCATTTAGCTCCTTTACTGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp TGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTTGCCTTGATTTTATGCCCGTaGGTGGTCGGCAGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: CPSKSLCYLQVTHCKELALILCP*VVGSKF
Trigger: AAACTTGCTGCCGACCACCCACGGGCATAAAATCAA...GGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp TGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTTGCCTGTTTCTCTGCTAGCTaGCCTTTTGTGCTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: CPSKSLCYLQVTHCKELACFSAS*PFVLSW
Trigger: CCAAGACAGCACAAAAGGCCAGCTAGCAGAGAAACA...GGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000505246.5
3UTR CAA 72 bp ATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTaGCAAAGCAGCATTAGCAAACAGAAGCAATTGCAC +
Preference number: 4 (lower is better)
Translates to: ILCPWVVGSKFY*QSSISKQKQLH
Trigger: GTGCAATTGCTTCTGTTTGCTAATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR CAA 72 bp TATTCAGATGCGCAGGGAAGCTTTGGCACTGATTTATaGCTCTTGAGTCATTTTCCACAGCTTAACACCACC +
Preference number: 4 (lower is better)
Translates to: YSDAQGSFGTDL*LLSHFPQLNTT
Trigger: GGTGGTGTTAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGCATCTGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp ATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATGGTTGTAGTGGTTTATaGCTGTGTAAAATTTCTCCC +
Preference number: 4 (lower is better)
Translates to: MRSRLALSTARDHSRYGYGCSGL*LCKISP
Trigger: GGGAGAAATTTTACACAGTCATAAACCACTACAACC...ATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp GTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATGGAGGAACAATTGCACCGTAAATaGGTAACCTCTAAAGTATCA +
Preference number: 4 (lower is better)
Translates to: VGLLLAQREITLDMAMEEQLHRK*VTSKVS
Trigger: TGATACTTTAGAGGTTACTCATTTACGGTGCAATTG...TTCCTCCATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp GCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACACTCTTTAGGCAATGCTaGAATGCACTTGATTTTATG +
Preference number: 4 (lower is better)
Translates to: AMEEGLQTAGSVQKINSTLFRQC*NALDFM
Trigger: CATAAAATCAAGTGCATTTCAGCATTGCCTAAAGAG...TGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp GCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTATGAAGATCTTAACATaGAAAGTGGTGTCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: AQGSFGTDLLLLSHFPQLMKILT*KVVSEL
Trigger: GAGCTCTGACACCACTTTTCATGTTAAGATCTTCAT...AAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp AGATATGGCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAACAAAATGCATTTATCTaGGATCCAAACCCTTCGCAT +
Preference number: 4 (lower is better)
Translates to: RYGYGGRFADSRVGSENQQNAFI*DPNPSH
Trigger: ATGCGAAGGGTTTGGATCTCAGATAAATGCATTTTG...TTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGCCATATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp ATGCACTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCCAAAATGCATTTATCTaGGATCCAAACCCTTCGCAT +
Preference number: 4 (lower is better)
Translates to: MHLILCPWVVGSKFYLQSQNAFI*DPNPSH
Trigger: ATGCGAAGGGTTTGGATCTCAGATAAATGCATTTTG...GCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp CACTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCCTGATTTATTGCTCTTaGGTCATTTTCCACAGCTTA +
Preference number: 4 (lower is better)
Translates to: HLILCPWVVGSKFYLQSSLIYCS*VIFHSL
Trigger: TAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAG...GCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp CTAGATATGGCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCCTGATTTATTGCTCTTaGGTCATTTTCCACAGCTTA +
Preference number: 4 (lower is better)
Translates to: LDMAMEEGLQTAGSVQKILIYCS*VIFHSL
Trigger: TAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAG...GATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGCCATATCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp GGAAGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTAACACCTTTCCATCAGCCGTCTaGGAATCCTTTTTGGCACTT +
Preference number: 4 (lower is better)
Translates to: GSFGTDLLLLSHFPQLNTFPSAV*ESFLAL
Trigger: AAGTGCCAAAAAGGATTCTCAGACGGCTGATGGAAA...GGTGTTAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR GCA 90 bp ACTAATGGGGCTATTGGTGCAAATTTATTCATAATAGAAGTGAACCAGAGGGCCCTTGGTGCCCTTCTCTaGGAAATTGTTCCCCAACTT +
Preference number: 4 (lower is better)
Translates to: TNGAIGANLFIIEVNQRALGALL*EIVPQL
Trigger: AAGTTGGGGAACAATTTCGCAGAGAAGGGCACCAAG...GGCCCTCTGGTTCACTTCTATTATGAATAAATTTGCACCAATAGCCCCATTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR GCA 90 bp ATGAAATGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTATGGAGGAAGGTTTaGAGACAGCAGGGTCGGTTC +
Preference number: 4 (lower is better)
Translates to: MKCPSKSLCYLQVTHCKELWRKV*RQQGRF
Trigger: GAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAG...TTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACATTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp ATGAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTTTCCTCGTTCTCTATaGCACTTACTTACTACAGTG +
Preference number: 4 (lower is better)
Translates to: MNSQSIKSTSTWKYRLGLFPRSL*HLLTTV
Trigger: CACTGTAGTAAGTAAGTGGCATAGAGAACGAGGAAA...GAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CCA 90 bp TGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTTGCCTTTTATGCCCGTGGGTaGTCGGCAGCAAGTTTTATT +
Preference number: 4 (lower is better)
Translates to: CPSKSLCYLQVTHCKELAFYARG*SAASFI
Trigger: AATAAAACTTGCTGCCGACCACCCACGGGCATAAAA...GGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp ATGAAATGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAATCTGCTGATTGTATCTaGGCCCTCCAAGATGCTGGC +
Preference number: 4 (lower is better)
Translates to: MKCPSKSLCYLQVTHCKESADCI*ALQDAG
Trigger: GCCAGCATCTTGGAGGGCCCAGATACAATCAGCAGA...TTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACATTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421177.6
CDS-3UTR CCA 90 bp TCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTTGCCCATCCCAGGTTGTCCCAGAGATaGACGGTGAACAATCATGTT +
Preference number: 4 (lower is better)
Translates to: SKSLCYLQVTHCKELAHPRLSQR*TVNNHV
Trigger: AACATGATTGTTCACCGTCCATCTCTGGGACAACCT...GGGATGGGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000505246.5
CDS-3UTR TCA 90 bp GAAGAAATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGTTGTAGTGGTTTATaGCTGTGTAAAATTTCTCCC +
Preference number: 4 (lower is better)
Translates to: EEMRSRLALSTARDHSRYGCSGL*LCKISP
Trigger: GGGAGAAATTTTACACAGTCATAAACCACTACAACC...ATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp AGATATGGCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAACAATTGCACCGTAAATaGGTAACCTCTAAAGTATCA +
Preference number: 4 (lower is better)
Translates to: RYGYGGRFADSRVGSENQQLHRK*VTSKVS
Trigger: TGATACTTTAGAGGTTACTCATTTACGGTGCAATTG...TTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGCCATATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp GCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTCTCTTTAGGCAATGCTaGAATGCACTTGATTTTATG +
Preference number: 4 (lower is better)
Translates to: AQGSFGTDLLLLSHFPQLLFRQC*NALDFM
Trigger: CATAAAATCAAGTGCATTTCAGCATTGCCTAAAGAG...AAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp CTTTTTCCTCGTTCTCTATGCCACTTACTTACTACAGTGCACCTTGGCAGCAGTCTCTTTAGGCAATGCTaGAATGCACTTGATTTTATG +
Preference number: 4 (lower is better)
Translates to: LFPRSLCHLLTTVHLGSSLFRQC*NALDFM
Trigger: CATAAAATCAAGTGCATTTCAGCATTGCCTAAAGAG...ACTGCTGCCAAGGTGCACTGTAGTAAGTAAGTGGCATAGAGAACGAGGAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR TCA 90 bp TGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTTGAGTATGAAGATCTTAACATaGAAAGTGGTGTCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: CVYSDAQGSFGTDLLLLSMKILT*KVVSEL
Trigger: GAGCTCTGACACCACTTTTCATGTTAAGATCTTCAT...ACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGCATCTGAATAGACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp ATGAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCCTGATTTATTGCTCTTaGGTCATTTTCCACAGCTTA +
Preference number: 4 (lower is better)
Translates to: MNSQSIKSTSTWKYRLGLLIYCS*VIFHSL
Trigger: TAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAG...GAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp ATCCCAGTAAAGGAGCTAAATGAAGATCTTAACATGAAAAGTGGTGTCAGAGCTCTTGGTGCCCTTCTCTaGGAAATTGTTCCCCAACTT +
Preference number: 4 (lower is better)
Translates to: IPVKELNEDLNMKSGVRALGALL*EIVPQL
Trigger: AAGTTGGGGAACAATTTCGCAGAGAAGGGCACCAAG...AGCTCTGACACCACTTTTCATGTTAAGATCTTCATTTAGCTCCTTTACTGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp ATGAAATGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAAGTGAACTCAGCAATTTaGGGAGGACGTGCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: MKCPSKSLCYLQVTHCKEVNSAI*GGRAFP
Trigger: AGGGAAAGCACGTCCTCCCCAAATTGCTGAGTTCAC...TTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACATTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp ATGAAATGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACCTTTTGTGCTGTCTTaGGTCTTCACTGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: MKCPSKSLCYLQVTHCKEPFVLS*VFTGAG
Trigger: ACCAGCACCAGTGAAGACCCAAGACAGCACAAAAGG...TTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACATTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000505246.5
CDS-3UTR TCA 90 bp TCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTTGCCCATCCCGGTTGTAGTGGTTTATaGCTGTGTAAAATTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SKSLCYLQVTHCKELAHPGCSGL*LCKISP
Trigger: GGGAGAAATTTTACACAGTCATAAACCACTACAACC...GGGATGGGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp TGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTTGCCGGTTGTAGTGGTTTATaGCTGTGTAAAATTTCTCCC +
Preference number: 4 (lower is better)
Translates to: CPSKSLCYLQVTHCKELAGCSGL*LCKISP
Trigger: GGGAGAAATTTTACACAGTCATAAACCACTACAACC...GGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp GAAGAAATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATCAATTGCACCGTAAATaGGTAACCTCTAAAGTATCA +
Preference number: 4 (lower is better)
Translates to: EEMRSRLALSTARDHSRYQLHRK*VTSKVS
Trigger: TGATACTTTAGAGGTTACTCATTTACGGTGCAATTG...ATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTTCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp TCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTTGCCCATCCCATGAAGATCTTAACATaGAAAGTGGTGTCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: SKSLCYLQVTHCKELAHPMKILT*KVVSEL
Trigger: GAGCTCTGACACCACTTTTCATGTTAAGATCTTCAT...GGGATGGGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp ATCCCAGTAAAGGAGCTAAATGAAGATCTTAACATGAAAAGTGGTGTCAGAGCTGGGAAGCTTTGGCACTaGTTTATTGCTCTTGAGTCA +
Preference number: 4 (lower is better)
Translates to: IPVKELNEDLNMKSGVRAGKLWH*FIALES
Trigger: TGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCC...AGCTCTGACACCACTTTTCATGTTAAGATCTTCATTTAGCTCCTTTACTGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp ATGAAATGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTTGGTGCCCTTCTCTaGGAAATTGTTCCCCAACTT +
Preference number: 4 (lower is better)
Translates to: MKCPSKSLCYLQVTHCKELGALL*EIVPQL
Trigger: AAGTTGGGGAACAATTTCGCAGAGAAGGGCACCAAG...TTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACATTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR GCA 90 bp ATGAAATGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAATTGTGTCTATTCAGATaGGCAGGGAAGCTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: MKCPSKSLCYLQVTHCKELCLFR*AGKLWH
Trigger: GTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAA...TTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACATTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp ATGAAATGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAATTGATTTTATGCCCGTaGGTGGTCGGCAGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: MKCPSKSLCYLQVTHCKELILCP*VVGSKF
Trigger: AAACTTGCTGCCGACCACCCACGGGCATAAAATCAA...TTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACATTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp TCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTTGCCCATCCCCTCTTTAGGCAATGCTaGAATGCACTTGATTTTATG +
Preference number: 4 (lower is better)
Translates to: SKSLCYLQVTHCKELAHPLFRQC*NALDFM
Trigger: CATAAAATCAAGTGCATTTCAGCATTGCCTAAAGAG...GGGATGGGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CCA 90 bp ATGAAATGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAATTTTATGCCCGTGGGTaGTCGGCAGCAAGTTTTATT +
Preference number: 4 (lower is better)
Translates to: MKCPSKSLCYLQVTHCKEFYARG*SAASFI
Trigger: AATAAAACTTGCTGCCGACCACCCACGGGCATAAAA...TTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACATTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
3UTR CAA 72 bp TATTTAATGAAATGTCCCTCAAAGTCCCTTTGTTATTaGCAAGTGACACATTGTAAGGAACTTGCCCATCCC +
Preference number: 4 (lower is better)
Translates to: YLMKCPSKSLCY*QVTHCKELAHP
Trigger: GGGATGGGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACATTTCATTAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp ATGAAATGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAAGGTTGTAGTGGTTTATaGCTGTGTAAAATTTCTCCC +
Preference number: 4 (lower is better)
Translates to: MKCPSKSLCYLQVTHCKEGCSGL*LCKISP
Trigger: GGGAGAAATTTTACACAGTCATAAACCACTACAACC...TTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACATTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR TCA 90 bp ATGAAATGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAAATGAAGATCTTAACATaGAAAGTGGTGTCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: MKCPSKSLCYLQVTHCKEMKILT*KVVSEL
Trigger: GAGCTCTGACACCACTTTTCATGTTAAGATCTTCAT...TTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACATTTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS CCA 90 bp CGCCGCCTCCCTTCCTGCCTCTCCCGGGGGCTGGGTGCGCGCGGGTaGGTGCGCGCGTGTGGCCGCGCCTCCACCTTGACGCAGCGCCCG +
Preference number: 5 (lower is better)
Translates to: RRLPSCLSRGLGARG*VRACGRASTLTQRP
Trigger: CGGGCGCTGCGTCAAGGTGGAGGCGCGGCCACACGCGCGCACCCACCCGCGCGCACCCAGCCCCCGGGAGAGGCAGGAAGGGAGGCGGCG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421177.6
CDS GCA 90 bp CGCGCCTCCACCTTGACGCAGCGCCCGCCCGGCCGCACAAAGGAGTaGGGGGCTGGGCGGGAGCCTCCCCTGGGACCACGCGCCCGCCCT +
Preference number: 5 (lower is better)
Translates to: RASTLTQRPPGRTKE*GAGREPPLGPRARP
Trigger: AGGGCGGGCGCGTGGTCCCAGGGGAGGCTCCCGCCCAGCCCCGCACTCCTTTGTGCGGCCGGGCGGGCGCTGCGTCAAGGTGGAGGCGCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421177.6
CDS GCA 90 bp CTCCTCGCGCCGCCGCCTCCCTTCCTGCCTCTCCCGGGGGCTGGGTaGGCGCGGGTGGGTGCGCGCGTGTGGCCGCGCCTCCACCTTGAC +
Preference number: 5 (lower is better)
Translates to: LLAPPPPFLPLPGAG*ARVGARVWPRLHLD
Trigger: GTCAAGGTGGAGGCGCGGCCACACGCGCGCACCCACCCGCGCGCACCCAGCCCCCGGGAGAGGCAGGAAGGGAGGCGGCGGCGCGAGGAG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421177.6
CDS GCA 90 bp CCCGGCTCCGGCAGGTCAGCTGAGCGCTCCGAGCTCCGCGTCTCCTaGTCCTGCTCGCAGCAATGGCGGAGGCGGCGCCGCGCGCGGACC +
Preference number: 5 (lower is better)
Translates to: PGSGRSAERSELRVS*SCSQQWRRRRRART
Trigger: GGTCCGCGCGCGGCGCCGCCTCCGCCATTGCTGCGAGCAGGAGCAGGAGACGCGGAGCTCGGAGCGCTCAGCTGACCTGCCGGAGCCGGG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421177.6
ENST00000513829.5
ENST00000621129.4
CDS CCA 90 bp GCTGAGCGCTCCGAGCTCCGCGTCTCCTGCTCCTGCTCGCAGCAATaGCGGAGGCGGCGCCGCGCGCGGACCCGGGAAGGGGAGCGAACG +
Preference number: 5 (lower is better)
Translates to: AERSELRVSCSCSQQ*RRRRRARTREGERT
Trigger: CGTTCGCTCCCCTTCCCGGGTCCGCGCGCGGCGCCGCCTCCGCCATTGCTGCGAGCAGGAGCAGGAGACGCGGAGCTCGGAGCGCTCAGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421177.6
ENST00000513829.5
ENST00000621129.4
CDS TCA 90 bp GGGAGCTCCGAGGCTGCAGCCCACGCCCGGCTCCGGCAGGTCAGCTaGGCGCTCCGAGCTCCGCGTCTCCTGCTCCTGGGGGTCCTGAGG +
Preference number: 5 (lower is better)
Translates to: GSSEAAAHARLRQVS*ALRAPRLLLLGVLR
Trigger: CCTCAGGACCCCCAGGAGCAGGAGACGCGGAGCTCGGAGCGCTCAGCTGACCTGCCGGAGCCGGGCGTGGGCTGCAGCCTCGGAGCTCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397958.5
ENST00000513555.5
CDS GCA 90 bp TCCGGCAGGTCAGCTGAGCGCTCCGAGCTCCGCGTCTCCTGCTCCTaGTCGCAGCAATGGCGGAGGCGGCGCCGCGCGCGGACCCGGGAA +
Preference number: 5 (lower is better)
Translates to: SGRSAERSELRVSCS*SQQWRRRRRARTRE
Trigger: TTCCCGGGTCCGCGCGCGGCGCCGCCTCCGCCATTGCTGCGAGCAGGAGCAGGAGACGCGGAGCTCGGAGCGCTCAGCTGACCTGCCGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421177.6
ENST00000513829.5
ENST00000621129.4
CDS CCA 90 bp GAGGTTTTCGGTGGTGCGGGAGGCGGAGTAGCGCTCTCCCAGGGCTaGGGTGTGGGCGCCCAGGGTGAGGCTGCCCCAGGCAGCGGGAGG +
Preference number: 5 (lower is better)
Translates to: EVFGGAGGGVALSQG*GVGAQGEAAPGSGR
Trigger: CCTCCCGCTGCCTGGGGCAGCCTCACCCTGGGCGCCCACACCCCAGCCCTGGGAGAGCGCTACTCCGCCTCCCGCACCACCGAAAACCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS TCA 90 bp GGGAGCTCCGAGGCTGCAGCCCACGCCCGGCTCCGGCAGGTCAGCTaGGCGCTCCGAGCTCCGCGTCTCCTGCTCCTGCTCGCAGCAATG +
Preference number: 5 (lower is better)
Translates to: GSSEAAAHARLRQVS*ALRAPRLLLLLAAM
Trigger: CATTGCTGCGAGCAGGAGCAGGAGACGCGGAGCTCGGAGCGCTCAGCTGACCTGCCGGAGCCGGGCGTGGGCTGCAGCCTCGGAGCTCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421177.6
ENST00000513829.5
ENST00000621129.4
CDS TCA 90 bp GGGAGCTCCGAGGCTGCAGCCCACGCCCGGCTCCGGCAGGTCAGCTaGGCGCTCCGAGCTCCGCGTCTCCTGCTCCTTTTTGGCACTTTG +
Preference number: 5 (lower is better)
Translates to: GSSEAAAHARLRQVS*ALRAPRLLLLFGTL
Trigger: CAAAGTGCCAAAAAGGAGCAGGAGACGCGGAGCTCGGAGCGCTCAGCTGACCTGCCGGAGCCGGGCGTGGGCTGCAGCCTCGGAGCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506380.5
CDS CCA 90 bp CGCTCAGTGCGCCGCTTGGAGGGAGGCGGAAAGGTTCCTCCGCTCTaGTTGGCAGAGAAGGTGGAGGTCCCACTGCAGCCGCCGCCCGAG +
Preference number: 5 (lower is better)
Translates to: RSVRRLEGGGKVPPL*LAEKVEVPLQPPPE
Trigger: CTCGGGCGGCGGCTGCAGTGGGACCTCCACCTTCTCTGCCAACCAGAGCGGAGGAACCTTTCCGCCTCCCTCCAAGCGGCGCACTGAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS GCA 90 bp GAAAGGTTCCTCCGCTCTGGTTGGCAGAGAAGGTGGAGGTCCCACTaGAGCCGCCGCCCGAGCATCCTGGGCACAGAGGAGGGGCCGCTG +
Preference number: 5 (lower is better)
Translates to: ERFLRSGWQRRWRSH*SRRPSILGTEEGPL
Trigger: CAGCGGCCCCTCCTCTGTGCCCAGGATGCTCGGGCGGCGGCTGCAGTGGGACCTCCACCTTCTCTGCCAACCAGAGCGGAGGAACCTTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS CCA 90 bp CAGTGCGCCGCTTGGAGGGAGGCGGAAAGGTTCCTCCGCTCTGGTTaGCAGAGAAGGTGGAGGTCCCACTGCAGCCGCCGCCCGAGCATC +
Preference number: 5 (lower is better)
Translates to: QCAAWREAERFLRSG*QRRWRSHCSRRPSI
Trigger: GATGCTCGGGCGGCGGCTGCAGTGGGACCTCCACCTTCTCTGCCAACCAGAGCGGAGGAACCTTTCCGCCTCCCTCCAAGCGGCGCACTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS CCA 90 bp AACCCGTCCTGCCTGCAGGACTCACGGATGAAAGACTATGGGGTGTaGGGGCGAGGCCGAAATGGGAGTGGAGCCCGCGCGGGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: NPSCLQDSRMKDYGV*GRGRNGSGARAGGG
Trigger: GCCTCCTCCCGCGCGGGCTCCACTCCCATTTCGGCCTCGCCCCCACACCCCATAGTCTTTCATCCGTGAGTCCTGCAGGCAGGACGGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS CCA 90 bp GACCTCCAACCCGTCCTGCCTGCAGGACTCACGGATGAAAGACTATaGGGTGTGGGGGCGAGGCCGAAATGGGAGTGGAGCCCGCGCGGG +
Preference number: 5 (lower is better)
Translates to: DLQPVLPAGLTDERL*GVGARPKWEWSPRG
Trigger: CCCGCGCGGGCTCCACTCCCATTTCGGCCTCGCCCCCACACCCCATAGTCTTTCATCCGTGAGTCCTGCAGGCAGGACGGGTTGGAGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CAA 90 bp CTACCTGCAGGGAGAGTTCTGCACCTCACGGGCCCAGGGCCGTCTCTTCCCAGCCCGGGCACTGGAGTCTaGCTCCGCGTAGTAGCTCTC +
Preference number: 5 (lower is better)
Translates to: LPAGRVLHLTGPGPSLPSPGTGV*LRVVAL
Trigger: GAGAGCTACTACGCGGAGCAAGACTCCAGTGCCCGG...GCTGGGAAGAGACGGCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAGGTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp CAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCGTCAAGGGGAGCGAACGATaGGGCTCCACGGCCGCTCCC +
Preference number: 5 (lower is better)
Translates to: QRGGSSQSTPSLPHCRAVKGSER*GSTAAP
Trigger: GGGAGCGGCCGTGGAGCCCAATCGTTCGCTCCCCTT...GACGGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421177.6
CDS-3UTR CAA 90 bp AAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGGACCGAGCCTGCCACATaGCAGGGCCGTCCCACCCCG +
Preference number: 5 (lower is better)
Translates to: KSTSTWKYRLGLCTVRTRTEPAT*QGRPTP
Trigger: CGGGGTGGGACGGCCCTGCAATGTGGCAGGCTCGGT...CCGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp CCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGCCGGGCACTGGAGTCTaGCTCCGCGTAGTAGCTCTC +
Preference number: 5 (lower is better)
Translates to: PSQHTPLMHTAAPRSRSVPGTGV*LRVVAL
Trigger: GAGAGCTACTACGCGGAGCAAGACTCCAGTGCCCGG...CACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp CACCACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGATGCACTGGGTGTTCTaGAGGACGAACCCATCGGGG +
Preference number: 5 (lower is better)
Translates to: HHPSQHTPLMHTAAPRSRMHWVF*RTNPSG
Trigger: CCCCGATGGGTTCGTCCTCAAGAACACCCAGTGCAT...CCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS TCA 90 bp CCTGTTTGCAGACCTCCAACCCGTCCTGCCTGCAGGACTCACGGATaGAAGACTATGGGGTGTGGGGGCGAGGCCGAAATGGGAGTGGAG +
Preference number: 5 (lower is better)
Translates to: PVCRPPTRPACRTHG*KTMGCGGEAEMGVE
Trigger: CTCCACTCCCATTTCGGCCTCGCCCCCACACCCCATAGTCTTTCATCCGTGAGTCCTGCAGGCAGGACGGGTTGGAGGTCTGCAAACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CAA 90 bp AGCAGACAGACTACCTGCAGGGAGAGTTCTGCACCTCACGGGCCCAGGGCCGTCGGTGAACTCAGCAATTaGGGGAGGACGTGCTTTCCC +
Preference number: 5 (lower is better)
Translates to: SRQTTCRESSAPHGPRAVGELSN*GRTCFP
Trigger: GGGAAAGCACGTCCTCCCCAAATTGCTGAGTTCACC...GACGGCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAGGTAGTCTGTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp CAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCGTCATGCACTGGGTGTTCTaGAGGACGAACCCATCGGGG +
Preference number: 5 (lower is better)
Translates to: QRGGSSQSTPSLPHCRAVMHWVF*RTNPSG
Trigger: CCCCGATGGGTTCGTCCTCAAGAACACCCAGTGCAT...GACGGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp CACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTATGCACTGGGTGTTCTaGAGGACGAACCCATCGGGG +
Preference number: 5 (lower is better)
Translates to: HPSQHTPLMHTAAPRSRSMHWVF*RTNPSG
Trigger: CCCCGATGGGTTCGTCCTCAAGAACACCCAGTGCAT...AGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp CCGCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCTTACTACAGTGCACCTCCGGGCACTGGAGTCTaGCTCCGCGTAGTAGCTCTC +
Preference number: 5 (lower is better)
Translates to: PLRQGHGLCLQTPYYSAPPGTGV*LRVVAL
Trigger: GAGAGCTACTACGCGGAGCAAGACTCCAGTGCCCGG...AGGTGCACTGTAGTAAGGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp CTACCTGCAGGGAGAGTTCTGCACCTCACGGGCCCAGGGCCGTCTCTTCCCAGCGCACACGGGCTTCACTaGTGTCTATTCAGATGCGCA +
Preference number: 5 (lower is better)
Translates to: LPAGRVLHLTGPGPSLPSAHGLH*CLFRCA
Trigger: TGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGC...GCTGGGAAGAGACGGCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAGGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS GCA 90 bp GGTGTCGAAGCCATCCTCCAGCAGCGGCTGCTTGGTGCCCTTCTCTaGGAAATTGTTCCCCAACTTCACCATCGTTCCGGGAGCTCCGAG +
Preference number: 5 (lower is better)
Translates to: GVEAILQQRLLGALL*EIVPQLHHRSGSSE
Trigger: CTCGGAGCTCCCGGAACGATGGTGAAGTTGGGGAACAATTTCGCAGAGAAGGGCACCAAGCAGCCGCTGCTGGAGGATGGCTTCGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000506380.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp TGCGCACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACCGCTCAGTGCGCCGCTaGGAGGGAGGCGGAAAGGTT +
Preference number: 5 (lower is better)
Translates to: CAHGLHLCLFRCAGKLWHRSVRR*EGGGKV
Trigger: AACCTTTCCGCCTCCCTCCAAGCGGCGCACTGAGCG...GTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CAA 90 bp CACCACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGCGTGCTTTCCCTTTCTaGCGGTCAGGTTCATACTCG +
Preference number: 5 (lower is better)
Translates to: HHPSQHTPLMHTAAPRSRRAFPF*RSGSYS
Trigger: CGAGTATGAACCTGACCGCAAGAAAGGGAAAGCACG...CCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp AAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGCCGGGCACTGGAGTCTaGCTCCGCGTAGTAGCTCTC +
Preference number: 5 (lower is better)
Translates to: KVHVYLEIQARPLHCAHTPGTGV*LRVVAL
Trigger: GAGAGCTACTACGCGGAGCAAGACTCCAGTGCCCGG...CGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp CTACCTGCAGGGAGAGTTCTGCACCTCACGGGCCCAGGGCCGTCTCTTCCCAGCTTACTACAGTGCACCTaGGCAGCAGTCAGCACTGTT +
Preference number: 5 (lower is better)
Translates to: LPAGRVLHLTGPGPSLPSLLQCT*AAVSTV
Trigger: AACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTAA...GCTGGGAAGAGACGGCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAGGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp CTGTGCGCACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCCGGGCACTGGAGTCTaGCTCCGCGTAGTAGCTCTC +
Preference number: 5 (lower is better)
Translates to: LCAHGLHLCLFRCAGKLWPGTGV*LRVVAL
Trigger: GAGAGCTACTACGCGGAGCAAGACTCCAGTGCCCGG...CCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGCGCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp CCACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCAAATGCGAAGTAGGCTaGCTCTTAGCACAGCGAGAG +
Preference number: 5 (lower is better)
Translates to: PPFSAHASDAHRCAKVTVKCEVG*LLAQRE
Trigger: CTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTT...GACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp CAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCGTCGCACACGGGCTTCACTaGTGTCTATTCAGATGCGCA +
Preference number: 5 (lower is better)
Translates to: QRGGSSQSTPSLPHCRAVAHGLH*CLFRCA
Trigger: TGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGC...GACGGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp CACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTCACTGGTGCTGGTCATaGGGACTGTTTCATCCTGTG +
Preference number: 5 (lower is better)
Translates to: HPSQHTPLMHTAAPRSRSHWCWS*GLFHPV
Trigger: CACAGGATGAAACAGTCCCAATGACCAGCACCAGTG...AGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421177.6
CDS GCA 90 bp GGCGTCATCAGGGGAATGGTGTCGAAGCCATCCTCCAGCAGCGGCTaGTTGGTGCCCTTCTCTGCGAAATTGTTCCCCAACTTCACCATC +
Preference number: 5 (lower is better)
Translates to: GVIRGMVSKPSSSSG*LVPFSAKLFPNFTI
Trigger: GATGGTGAAGTTGGGGAACAATTTCGCAGAGAAGGGCACCAAGCAGCCGCTGCTGGAGGATGGCTTCGACACCATTCCCCTGATGACGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000506380.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp CTGTGCGCACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCTCCTTAGTGCTGGGTaGGGGAGGGGGCGACCAAAA +
Preference number: 5 (lower is better)
Translates to: LCAHGLHLCLFRCAGKLWLLSAG*GRGRPK
Trigger: TTTTGGTCGCCCCCTCCCCAACCCAGCACTAAGGAG...CCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGCGCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CAA 90 bp CCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGCCCTTCTCTGCGAAATaGTTCCCCAACTTCACCATC +
Preference number: 5 (lower is better)
Translates to: PSQHTPLMHTAAPRSRSVPFSAK*FPNFTI
Trigger: GATGGTGAAGTTGGGGAACAATTTCGCAGAGAAGGG...CACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp AGTCAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCCGTGCTTTCCCTTTCTaGCGGTCAGGTTCATACTCG +
Preference number: 5 (lower is better)
Translates to: SQRGGSSQSTPSLPHCRARAFPF*RSGSYS
Trigger: CGAGTATGAACCTGACCGCAAGAAAGGGAAAGCACG...GGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp CTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGGGCTTCACTTGTGTCGGTGAACTCAGCAATTaGGGGAGGACGTGCTTTCCC +
Preference number: 5 (lower is better)
Translates to: LEIQARPLHCAHTGFTCVGELSN*GRTCFP
Trigger: GGGAAAGCACGTCCTCCCCAAATTGCTGAGTTCACC...GACACAAGTGAAGCCCGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp CTACCTGCAGGGAGAGTTCTGCACCTCACGGGCCCAGGGCCGTCTCTTCCCAGCAATGCTGAAATGCACTaGATTTTATGCCCGTGGGTG +
Preference number: 5 (lower is better)
Translates to: LPAGRVLHLTGPGPSLPSNAEMH*ILCPWV
Trigger: CACCCACGGGCATAAAATCAAGTGCATTTCAGCATT...GCTGGGAAGAGACGGCCCTGGGCCCGTGAGGTGCAGAACTCTCCCTGCAGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp CCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGAAATGCGAAGTAGGCTaGCTCTTAGCACAGCGAGAG +
Preference number: 5 (lower is better)
Translates to: PSQHTPLMHTAAPRSRSVKCEVG*LLAQRE
Trigger: CTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTT...CACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp CTTTTTCCTCGTTCTCTATGCCACTTACTTACTACAGTGCACCTTGGCAGCAGTACCGAGCCTGCCACATaGCAGGGCCGTCCCACCCCG +
Preference number: 5 (lower is better)
Translates to: LFPRSLCHLLTTVHLGSSTEPAT*QGRPTP
Trigger: CGGGGTGGGACGGCCCTGCAATGTGGCAGGCTCGGT...ACTGCTGCCAAGGTGCACTGTAGTAAGTAAGTGGCATAGAGAACGAGGAAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp CACCACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGAATTTGTCATTTTGTTaGCACGGTGCCACACCAGTC +
Preference number: 5 (lower is better)
Translates to: HHPSQHTPLMHTAAPRSRNLSFC*HGATPV
Trigger: GACTGGTGTGGCACCGTGCAAACAAAATGACAAATT...CCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp CAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCGTCATGCGCAGGGAAGCTTaGGCACTGATTTATTGCTCT +
Preference number: 5 (lower is better)
Translates to: QRGGSSQSTPSLPHCRAVMRREA*ALIYCS
Trigger: AGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGCAT...GACGGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp CTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGGGCTTCACTTGTGTCGCACACGGGCTTCACTaGTGTCTATTCAGATGCGCA +
Preference number: 5 (lower is better)
Translates to: LEIQARPLHCAHTGFTCVAHGLH*CLFRCA
Trigger: TGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGC...GACACAAGTGAAGCCCGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp GCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACAAAGGGGAGCGAACGATaGGGCTCCACGGCCGCTCCC +
Preference number: 5 (lower is better)
Translates to: AMEEGLQTAGSVQKINSTKGSER*GSTAAP
Trigger: GGGAGCGGCCGTGGAGCCCAATCGTTCGCTCCCCTT...TGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421177.6
ENST00000513829.5
ENST00000621129.4
CDS TCA 90 bp GGTCATACTTGTACACCTTGTAGACAACCAGGAAGACGACGCAGGTaGGGAAGGCCAGGGCGAAGAGGACCAACACGGAGACCTTATCCG +
Preference number: 5 (lower is better)
Translates to: GHTCTPCRQPGRRRR*GRPGRRGPTRRPYP
Trigger: CGGATAAGGTCTCCGTGTTGGTCCTCTTCGCCCTGGCCTTCCTCACCTGCGTCGTCTTCCTGGTTGTCTACAAGGTGTACAAGTATGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504171.1
CDS-3UTR CAA 90 bp GCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACACGCTCAGTGCGCCGCTaGGAGGGAGGCGGAAAGGTT +
Preference number: 5 (lower is better)
Translates to: AMEEGLQTAGSVQKINSTRSVRR*EGGGKV
Trigger: AACCTTTCCGCCTCCCTCCAAGCGGCGCACTGAGCG...TGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CAA 90 bp CTGTGCGCACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGGCTATGGAGGAAGGTTaGCAGACAGCAGGGTCGGTT +
Preference number: 5 (lower is better)
Translates to: LCAHGLHLCLFRCAGKLWAMEEG*QTAGSV
Trigger: AACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGC...CCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGCGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp TGCGCACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACGCTATGGAGGAAGGTTaGCAGACAGCAGGGTCGGTT +
Preference number: 5 (lower is better)
Translates to: CAHGLHLCLFRCAGKLWHAMEEG*QTAGSV
Trigger: AACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGC...GTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp AAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGCCCTTCTCTGCGAAATaGTTCCCCAACTTCACCATC +
Preference number: 5 (lower is better)
Translates to: KVHVYLEIQARPLHCAHTPFSAK*FPNFTI
Trigger: GATGGTGAAGTTGGGGAACAATTTCGCAGAGAAGGG...CGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp CGCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCTTACTACAGTGCACCTTCCCTTCTCTGCGAAATaGTTCCCCAACTTCACCATC +
Preference number: 5 (lower is better)
Translates to: RCAKVTVCVSRHLTTVHLPFSAK*FPNFTI
Trigger: GATGGTGAAGTTGGGGAACAATTTCGCAGAGAAGGG...AAGGTGCACTGTAGTAAGGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp GCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACACCGGGCACTGGAGTCTaGCTCCGCGTAGTAGCTCTC +
Preference number: 5 (lower is better)
Translates to: AMEEGLQTAGSVQKINSTPGTGV*LRVVAL
Trigger: GAGAGCTACTACGCGGAGCAAGACTCCAGTGCCCGG...TGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp CAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCGTCTCCCTCAAAGTCCCTTaGTTATTTGCAAGTGACACA +
Preference number: 5 (lower is better)
Translates to: QRGGSSQSTPSLPHCRAVSLKVP*LFASDT
Trigger: TGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGA...GACGGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp GGAAGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTAACACCACCGAGCCTGCCACATaGCAGGGCCGTCCCACCCCG +
Preference number: 5 (lower is better)
Translates to: GSFGTDLLLLSHFPQLNTTEPAT*QGRPTP
Trigger: CGGGGTGGGACGGCCCTGCAATGTGGCAGGCTCGGT...GGTGTTAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp CCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGTTGAAATTTGTCATTTaGTTTGCACGGTGCCACACC +
Preference number: 5 (lower is better)
Translates to: PSQHTPLMHTAAPRSRSVLKFVI*FARCHT
Trigger: GGTGTGGCACCGTGCAAACAAAATGACAAATTTCAA...CACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp GGTCTGTGTCTCCAGACACCTTACTACAGTGCACCTTGGCAGCAGTCAGCACTGGCACACGGGCTTCACTaGTGTCTATTCAGATGCGCA +
Preference number: 5 (lower is better)
Translates to: GLCLQTPYYSAPWQQSALAHGLH*CLFRCA
Trigger: TGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGC...CAGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGGTGTCTGGAGACACAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp GAAGAAATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATAAGGGGAGCGAACGATaGGGCTCCACGGCCGCTCCC +
Preference number: 5 (lower is better)
Translates to: EEMRSRLALSTARDHSRYKGSER*GSTAAP
Trigger: GGGAGCGGCCGTGGAGCCCAATCGTTCGCTCCCCTT...ATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421177.6
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp TGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTTGAGTCGCTCAGTGCGCCGCTaGGAGGGAGGCGGAAAGGTT +
Preference number: 5 (lower is better)
Translates to: CVYSDAQGSFGTDLLLLSRSVRR*EGGGKV
Trigger: AACCTTTCCGCCTCCCTCCAAGCGGCGCACTGAGCG...ACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGCATCTGAATAGACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CAA 90 bp CTCGTTCTCTATGCCACTTACTTACTACAGTGCACCTTGGCAGCAGTCAGCACTATGCACTGGGTGTTCTaGAGGACGAACCCATCGGGG +
Preference number: 5 (lower is better)
Translates to: LVLYATYLLQCTLAAVSTMHWVF*RTNPSG
Trigger: CCCCGATGGGTTCGTCCTCAAGAACACCCAGTGCAT...AGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGTAAGTGGCATAGAGAACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp ATGAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCCCGGGCACTGGAGTCTaGCTCCGCGTAGTAGCTCTC +
Preference number: 5 (lower is better)
Translates to: MNSQSIKSTSTWKYRLGLPGTGV*LRVVAL
Trigger: GAGAGCTACTACGCGGAGCAAGACTCCAGTGCCCGG...GAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp CCACCCTTCTCAGCACACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCAAGTCCCTTTGTTATTaGCAAGTGACACATTGTAAG +
Preference number: 5 (lower is better)
Translates to: PPFSAHASDAHRCAKVTVKSLCY*QVTHCK
Trigger: CTTACAATGTGTCACTTGCAAATAACAAAGGGACTT...GACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp AGTCAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCTCCCTCAAAGTCCCTTaGTTATTTGCAAGTGACACA +
Preference number: 5 (lower is better)
Translates to: SQRGGSSQSTPSLPHCRASLKVP*LFASDT
Trigger: TGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGA...GGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp CGGTCTGTGTCTCCAGACACCTTACTACAGTGCACCTTGGCAGCAGTCAGCACTAAATGCGAAGTAGGCTaGCTCTTAGCACAGCGAGAG +
Preference number: 5 (lower is better)
Translates to: RSVSPDTLLQCTLAAVSTKCEVG*LLAQRE
Trigger: CTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTT...AGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGGTGTCTGGAGACACAGACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp ACTAATGGGGCTATTGGTGCAAATTTATTCATAATAGAAGTGAACCAGAGGGCCACCGAGCCTGCCACATaGCAGGGCCGTCCCACCCCG +
Preference number: 5 (lower is better)
Translates to: TNGAIGANLFIIEVNQRATEPAT*QGRPTP
Trigger: CGGGGTGGGACGGCCCTGCAATGTGGCAGGCTCGGT...GGCCCTCTGGTTCACTTCTATTATGAATAAATTTGCACCAATAGCCCCATTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp AAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGATGCGCAGGGAAGCTTaGGCACTGATTTATTGCTCT +
Preference number: 5 (lower is better)
Translates to: KVHVYLEIQARPLHCAHTMRREA*ALIYCS
Trigger: AGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGCAT...CGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp CTCGTTCTCTATGCCACTTACTTACTACAGTGCACCTTGGCAGCAGTCAGCACTAGACACACCAGCACTTaGGGAGGCCAAGACCAGCAG +
Preference number: 5 (lower is better)
Translates to: LVLYATYLLQCTLAAVSTRHTST*GGQDQQ
Trigger: CTGCTGGTCTTGGCCTCCCAAAGTGCTGGTGTGTCT...AGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGTAAGTGGCATAGAGAACGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS TCA 90 bp TTCAGAAATCTGCCCAGGCATCGCGAGGGTCCGTGGCTTCATTCTTaGAGTCAGCGAGACGAAGAACGCACCAGAAGTAACCAATTCCAG +
Preference number: 5 (lower is better)
Translates to: FRNLPRHREGPWLHS*SQRDEERTRSNQFQ
Trigger: CTGGAATTGGTTACTTCTGGTGCGTTCTTCGTCTCGCTGACTTCAAGAATGAAGCCACGGACCCTCGCGATGCCTGGGCAGATTTCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513555.5
CDS-3UTR CAA 90 bp CACTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATGCACTGGGTGTTCTaGAGGACGAACCCATCGGGG +
Preference number: 5 (lower is better)
Translates to: HLILCPWVVGSKFYLQSSMHWVF*RTNPSG
Trigger: CCCCGATGGGTTCGTCCTCAAGAACACCCAGTGCAT...GCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp CTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGGGCTTCACTTGTGTCTCCCTCAAAGTCCCTTaGTTATTTGCAAGTGACACA +
Preference number: 5 (lower is better)
Translates to: LEIQARPLHCAHTGFTCVSLKVP*LFASDT
Trigger: TGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGA...GACACAAGTGAAGCCCGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp GATGCACACCGCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCTTACTACAAATGCTGAAATGCACTaGATTTTATGCCCGTGGGTG +
Preference number: 5 (lower is better)
Translates to: DAHRCAKVTVCVSRHLTTNAEMH*ILCPWV
Trigger: CACCCACGGGCATAAAATCAAGTGCATTTCAGCATT...TGTAGTAAGGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCGGTGTGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp TTCTGTCTTAGAAGCACATTTCAGGAAACAAGAGTGGCGCTGACCACGGTCACCGCTATGGAGGAAGGTTaGCAGACAGCAGGGTCGGTT +
Preference number: 5 (lower is better)
Translates to: FCLRSTFQETRVALTTVTAMEEG*QTAGSV
Trigger: AACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGC...GGTGACCGTGGTCAGCGCCACTCTTGTTTCCTGAAATGTGCTTCTAAGACAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp GTCAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCGACTGATTTATTGCTCTaGAGTCATTTTCCACAGCTT +
Preference number: 5 (lower is better)
Translates to: VRGEGVVNPHRACHIAGPTDLLL*SHFPQL
Trigger: AAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGT...CGGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp ACGCCTCTGATGCACACCGCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCTTTGGCACTGATTTATaGCTCTTGAGTCATTTTCCA +
Preference number: 5 (lower is better)
Translates to: TPLMHTAAPRSRSVSPDTFGTDL*LLSHFP
Trigger: TGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAA...GGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCGGTGTGCATCAGAGGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp CTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATGCCCAGGCATCTAGGTaGTCCCAGAGATGGACGGTG +
Preference number: 5 (lower is better)
Translates to: LDFMPVGGRQQVLFAKQHAQASR*SQRWTV
Trigger: CACCGTCCATCTCTGGGACAACCTAGATGCCTGGGC...ATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000505246.5
CDS-3UTR CAA 90 bp CTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATCAGAGAGGGTCCTGTTaGCAGACCTCCAACCCGTCC +
Preference number: 5 (lower is better)
Translates to: LDFMPVGGRQQVLFAKQHQRGSC*QTSNPS
Trigger: GGACGGGTTGGAGGTCTGCAAACAGGACCCTCTCTG...ATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS CCA 90 bp GTTGTCCCAGAGATGGACGGTGAACAATCATGTTTCTCTGCTAGCTaGCCTTTTGTGCTGTCTTGGGTCTTCACTGGTGCTGGTCATTGG +
Preference number: 5 (lower is better)
Translates to: VVPEMDGEQSCFSAS*PFVLSWVFTGAGHW
Trigger: CCAATGACCAGCACCAGTGAAGACCCAAGACAGCACAAAAGGCCAGCTAGCAGAGAAACATGATTGTTCACCGTCCATCTCTGGGACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421177.6
ENST00000504347.1
ENST00000505246.5
CDS CCA 90 bp CTGAGGAGGACAGAAAGGCAAGAAGGACCTAGGTTGTCCCAGAGATaGACGGTGAACAATCATGTTTCTCTGCTAGCTGGCCTTTTGTGC +
Preference number: 5 (lower is better)
Translates to: LRRTERQEGPRLSQR*TVNNHVSLLAGLLC
Trigger: GCACAAAAGGCCAGCTAGCAGAGAAACATGATTGTTCACCGTCCATCTCTGGGACAACCTAGGTCCTTCTTGCCTTTCTGTCCTCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504347.1
CDS-3UTR CAA 90 bp TGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTTGAGTCTCCTTAGTGCTGGGTaGGGGAGGGGGCGACCAAAA +
Preference number: 5 (lower is better)
Translates to: CVYSDAQGSFGTDLLLLSLLSAG*GRGRPK
Trigger: TTTTGGTCGCCCCCTCCCCAACCCAGCACTAAGGAG...ACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGCATCTGAATAGACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CAA 90 bp ACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTGATTCGTGCTTTCCCTTTCTaGCGGTCAGGTTCATACTCG +
Preference number: 5 (lower is better)
Translates to: TRASLVSIQMRREALALIRAFPF*RSGSYS
Trigger: CGAGTATGAACCTGACCGCAAGAAAGGGAAAGCACG...AATCAGTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp GAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGGGTGAACTCAGCAATTaGGGGAGGACGTGCTTTCCC +
Preference number: 5 (lower is better)
Translates to: EFTVNKVHVYLEIQARPLGELSN*GRTCFP
Trigger: GGGAAAGCACGTCCTCCCCAAATTGCTGAGTTCACC...CAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp CTAGATATGGCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCGGTGAACTCAGCAATTaGGGGAGGACGTGCTTTCCC +
Preference number: 5 (lower is better)
Translates to: LDMAMEEGLQTAGSVQKIGELSN*GRTCFP
Trigger: GGGAAAGCACGTCCTCCCCAAATTGCTGAGTTCACC...GATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGCCATATCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp ATGCACTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCATGCACTGGGTGTTCTaGAGGACGAACCCATCGGGG +
Preference number: 5 (lower is better)
Translates to: MHLILCPWVVGSKFYLQSMHWVF*RTNPSG
Trigger: CCCCGATGGGTTCGTCCTCAAGAACACCCAGTGCAT...GCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAGTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp CACTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCGCTATGGAGGAAGGTTaGCAGACAGCAGGGTCGGTT +
Preference number: 5 (lower is better)
Translates to: HLILCPWVVGSKFYLQSSAMEEG*QTAGSV
Trigger: AACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGC...GCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp AGTCAGAGGGGAGGGAGTAGTCAATCCACACCGAGCCTGCCACATTGCAGGGCCTTTGGCACTGATTTATaGCTCTTGAGTCATTTTCCA +
Preference number: 5 (lower is better)
Translates to: SQRGGSSQSTPSLPHCRAFGTDL*LLSHFP
Trigger: TGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAA...GGCCCTGCAATGTGGCAGGCTCGGTGTGGATTGACTACTCCCTCCCCTCTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp CTAGATATGGCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAGGCAGGAGAATCGCTaGAACTCAGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: LDMAMEEGLQTAGSVQKIRQENR*NSGGGG
Trigger: ACCTCCACCTCCTGAGTTCAAGCGATTCTCCTGCCT...GATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGCCATATCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421177.6
CDS-3UTR CAA 90 bp TTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATTCAGAGAGGGTCCTGTTaGCAGACCTCCAACCCGTCC +
Preference number: 5 (lower is better)
Translates to: LILCPWVVGSKFYLQSSIQRGSC*QTSNPS
Trigger: GGACGGGTTGGAGGTCTGCAAACAGGACCCTCTCTG...AATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS TCA 90 bp AATAATCCAACCTGTCCAACTCGCGAGGGTCCGTGGCTTCATTCTTaGAGTCAGCGAGACGAAGAACGCACCAGAAGTAACCAATTCCAG +
Preference number: 5 (lower is better)
Translates to: NNPTCPTREGPWLHS*SQRDEERTRSNQFQ
Trigger: CTGGAATTGGTTACTTCTGGTGCGTTCTTCGTCTCGCTGACTTCAAGAATGAAGCCACGGACCCTCGCGAGTTGGACAGGTTGGATTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421177.6
CDS CCA 90 bp TCTTGGGTCTTCACTGGTGCTGGTCATTGGGACTGTTTCATCCTGTaGTTTTCTTCCTCTGCTGATTGTATCTGGGCCCTCCAAGATGCT +
Preference number: 5 (lower is better)
Translates to: SWVFTGAGHWDCFIL*FSSSADCIWALQDA
Trigger: AGCATCTTGGAGGGCCCAGATACAATCAGCAGAGGAAGAAAACCACAGGATGAAACAGTCCCAATGACCAGCACCAGTGAAGACCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000504347.1
CDS-3UTR CAA 90 bp TTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATGGAGGAAGGTTTGGGTGAACTCAGCAATTaGGGGAGGACGTGCTTTCCC +
Preference number: 5 (lower is better)
Translates to: LLLAQREITLDMAMEEGLGELSN*GRTCFP
Trigger: GGGAAAGCACGTCCTCCCCAAATTGCTGAGTTCACC...CAAACCTTCCTCCATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp TATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACAAAATGCACTGGGTGTTCTaGAGGACGAACCCATCGGGG +
Preference number: 5 (lower is better)
Translates to: YGGRFADSRVGSENQFHKMHWVF*RTNPSG
Trigger: CCCCGATGGGTTCGTCCTCAAGAACACCCAGTGCAT...TTTGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp CTGTGCGCACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGTCCCTCAAAGTCCCTTaGTTATTTGCAAGTGACACA +
Preference number: 5 (lower is better)
Translates to: LCAHGLHLCLFRCAGKLWSLKVP*LFASDT
Trigger: TGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGA...CCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGCGCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp CTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATGCTATGGAGGAAGGTTaGCAGACAGCAGGGTCGGTT +
Preference number: 5 (lower is better)
Translates to: LDFMPVGGRQQVLFAKQHAMEEG*QTAGSV
Trigger: AACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGC...ATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp AAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGGACTGATTTATTGCTCTaGAGTCATTTTCCACAGCTT +
Preference number: 5 (lower is better)
Translates to: KSTSTWKYRLGLCTVRTRTDLLL*SHFPQL
Trigger: AAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGT...CCGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp CTGTGTCTCCAGACACCTTACTACAGTGCACCTTGGCAGCAGTCAGCACTGTTAATGCGCAGGGAAGCTTaGGCACTGATTTATTGCTCT +
Preference number: 5 (lower is better)
Translates to: LCLQTPYYSAPWQQSALLMRREA*ALIYCS
Trigger: AGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGCAT...TAACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGGTGTCTGGAGACACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp TTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATGGAGGAAGGTTTGCTCAGGAGGTGGAGGTaGTGGCGAGCTGAGATTACA +
Preference number: 5 (lower is better)
Translates to: LLLAQREITLDMAMEEGLLRRWR*WRAEIT
Trigger: TGTAATCTCAGCTCGCCACAACCTCCACCTCCTGAG...CAAACCTTCCTCCATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421177.6
CDS-3UTR CAA 90 bp ACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTGATTTCCGTGGCTTCATTCTaGAAGTCAGCGAGACGAAGA +
Preference number: 5 (lower is better)
Translates to: TRASLVSIQMRREALALISVASF*KSARRR
Trigger: TCTTCGTCTCGCTGACTTCAAGAATGAAGCCACGGA...AATCAGTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CAA 90 bp CACTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCCACTGGTGCTGGTCATaGGGACTGTTTCATCCTGTG +
Preference number: 5 (lower is better)
Translates to: HLILCPWVVGSKFYLQSSHWCWS*GLFHPV
Trigger: CACAGGATGAAACAGTCCCAATGACCAGCACCAGTG...GCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000505246.5
CDS GCA 90 bp AGATGGACGGTGAACAATCATGTTTCTCTGCTAGCTGGCCTTTTGTaGTGTCTTGGGTCTTCACTGGTGCTGGTCATTGGGACTGTTTCA +
Preference number: 5 (lower is better)
Translates to: RWTVNNHVSLLAGLL*CLGSSLVLVIGTVS
Trigger: TGAAACAGTCCCAATGACCAGCACCAGTGAAGACCCAAGACAGCACAAAAGGCCAGCTAGCAGAGAAACATGATTGTTCACCGTCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421177.6
ENST00000504347.1
ENST00000505246.5
CDS-3UTR CAA 90 bp GTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATGGAGGAACCCTTCTCTGCGAAATaGTTCCCCAACTTCACCATC +
Preference number: 5 (lower is better)
Translates to: VGLLLAQREITLDMAMEEPFSAK*FPNFTI
Trigger: GATGGTGAAGTTGGGGAACAATTTCGCAGAGAAGGG...TTCCTCCATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp GCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACACCCTTCTCTGCGAAATaGTTCCCCAACTTCACCATC +
Preference number: 5 (lower is better)
Translates to: AMEEGLQTAGSVQKINSTPFSAK*FPNFTI
Trigger: GATGGTGAAGTTGGGGAACAATTTCGCAGAGAAGGG...TGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp AGGAAGAAATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATCGTGCTTTCCCTTTCTaGCGGTCAGGTTCATACTCG +
Preference number: 5 (lower is better)
Translates to: RKKCEVGLLLAQREITLDRAFPF*RSGSYS
Trigger: CGAGTATGAACCTGACCGCAAGAAAGGGAAAGCACG...ATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTTCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp GCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTCGTGCTTTCCCTTTCTaGCGGTCAGGTTCATACTCG +
Preference number: 5 (lower is better)
Translates to: AQGSFGTDLLLLSHFPQLRAFPF*RSGSYS
Trigger: CGAGTATGAACCTGACCGCAAGAAAGGGAAAGCACG...AAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp TTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATTGGTGAACTCAGCAATTaGGGGAGGACGTGCTTTCCC +
Preference number: 5 (lower is better)
Translates to: LILCPWVVGSKFYLQSSIGELSN*GRTCFP
Trigger: GGGAAAGCACGTCCTCCCCAAATTGCTGAGTTCACC...AATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp TCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTTGCCCATCCCATGCACTGGGTGTTCTaGAGGACGAACCCATCGGGG +
Preference number: 5 (lower is better)
Translates to: SKSLCYLQVTHCKELAHPMHWVF*RTNPSG
Trigger: CCCCGATGGGTTCGTCCTCAAGAACACCCAGTGCAT...GGGATGGGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp GAAGAAATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGCTATGGAGGAAGGTTaGCAGACAGCAGGGTCGGTT +
Preference number: 5 (lower is better)
Translates to: EEMRSRLALSTARDHSRYAMEEG*QTAGSV
Trigger: AACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGC...ATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp TTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATTGCTATGGAGGAAGGTTaGCAGACAGCAGGGTCGGTT +
Preference number: 5 (lower is better)
Translates to: LILCPWVVGSKFYLQSSIAMEEG*QTAGSV
Trigger: AACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGC...AATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp AAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGCGCACACGTTTGGCACTGATTTATaGCTCTTGAGTCATTTTCCA +
Preference number: 5 (lower is better)
Translates to: KVHVYLEIQARPLHCAHTFGTDL*LLSHFP
Trigger: TGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAA...CGTGTGCGCACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp CGCTGCGCCAAGGTCACGGTCTGTGTCTCCAGACACCTTACTACAGTGCACCTTTTTGGCACTGATTTATaGCTCTTGAGTCATTTTCCA +
Preference number: 5 (lower is better)
Translates to: RCAKVTVCVSRHLTTVHLFGTDL*LLSHFP
Trigger: TGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAA...AAGGTGCACTGTAGTAAGGTGTCTGGAGACACAGACCGTGACCTTGGCGCAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp CTCGTTCTCTATGCCACTTACTTACTACAGTGCACCTTGGCAGCAGTCAGCACTATGCGCAGGGAAGCTTaGGCACTGATTTATTGCTCT +
Preference number: 5 (lower is better)
Translates to: LVLYATYLLQCTLAAVSTMRREA*ALIYCS
Trigger: AGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGCAT...AGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGTAAGTGGCATAGAGAACGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp TCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTTGCCCATCCCAGACACACCAGCACTTaGGGAGGCCAAGACCAGCAG +
Preference number: 5 (lower is better)
Translates to: SKSLCYLQVTHCKELAHPRHTST*GGQDQQ
Trigger: CTGCTGGTCTTGGCCTCCCAAAGTGCTGGTGTGTCT...GGGATGGGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CAA 90 bp GAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGTCCGTGGCTTCATTCTaGAAGTCAGCGAGACGAAGA +
Preference number: 5 (lower is better)
Translates to: EFTVNKVHVYLEIQARPLSVASF*KSARRR
Trigger: TCTTCGTCTCGCTGACTTCAAGAATGAAGCCACGGA...CAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CAA 90 bp ATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATCCCTTCTCTGCGAAATaGTTCCCCAACTTCACCATC +
Preference number: 5 (lower is better)
Translates to: MRSRLALSTARDHSRYGYPFSAK*FPNFTI
Trigger: GATGGTGAAGTTGGGGAACAATTTCGCAGAGAAGGG...ATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp CTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATCCCTTCTCTGCGAAATaGTTCCCCAACTTCACCATC +
Preference number: 5 (lower is better)
Translates to: LDFMPVGGRQQVLFAKQHPFSAK*FPNFTI
Trigger: GATGGTGAAGTTGGGGAACAATTTCGCAGAGAAGGG...ATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp TGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTTGCCGGTGAACTCAGCAATTaGGGGAGGACGTGCTTTCCC +
Preference number: 5 (lower is better)
Translates to: CPSKSLCYLQVTHCKELAGELSN*GRTCFP
Trigger: GGGAAAGCACGTCCTCCCCAAATTGCTGAGTTCACC...GGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp ATGAAATGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACCGGGCACTGGAGTCTaGCTCCGCGTAGTAGCTCTC +
Preference number: 5 (lower is better)
Translates to: MKCPSKSLCYLQVTHCKEPGTGV*LRVVAL
Trigger: GAGAGCTACTACGCGGAGCAAGACTCCAGTGCCCGG...TTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACATTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp ACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTGATTAATGCTGAAATGCACTaGATTTTATGCCCGTGGGTG +
Preference number: 5 (lower is better)
Translates to: TRASLVSIQMRREALALINAEMH*ILCPWV
Trigger: CACCCACGGGCATAAAATCAAGTGCATTTCAGCATT...AATCAGTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp TTCTCTATGCCACTTACTTACTACAGTGCACCTTGGCAGCAGTCAGCACTGTTAAAATGCGAAGTAGGCTaGCTCTTAGCACAGCGAGAG +
Preference number: 5 (lower is better)
Translates to: FSMPLTYYSAPWQQSALLKCEVG*LLAQRE
Trigger: CTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTT...TAACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGTAAGTGGCATAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp GCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTTTACTACAGTGCACCTaGGCAGCAGTCAGCACTGTT +
Preference number: 5 (lower is better)
Translates to: AQGSFGTDLLLLSHFPQLLLQCT*AAVSTV
Trigger: AACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTAA...AAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp CTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATTTACTACAGTGCACCTaGGCAGCAGTCAGCACTGTT +
Preference number: 5 (lower is better)
Translates to: LDFMPVGGRQQVLFAKQHLLQCT*AAVSTV
Trigger: AACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTAA...ATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp GAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGATGCGCAGGGAAGCTTaGGCACTGATTTATTGCTCT +
Preference number: 5 (lower is better)
Translates to: EFTVNKVHVYLEIQARPLMRREA*ALIYCS
Trigger: AGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGCAT...CAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp TGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTTGAGTGCACACGGGCTTCACTaGTGTCTATTCAGATGCGCA +
Preference number: 5 (lower is better)
Translates to: CVYSDAQGSFGTDLLLLSAHGLH*CLFRCA
Trigger: TGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGC...ACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGCATCTGAATAGACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp TATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACAAACCCTTCTCTGCGAAATaGTTCCCCAACTTCACCATC +
Preference number: 5 (lower is better)
Translates to: YGGRFADSRVGSENQFHKPFSAK*FPNFTI
Trigger: GATGGTGAAGTTGGGGAACAATTTCGCAGAGAAGGG...TTTGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp TATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACAAAAAATGCGAAGTAGGCTaGCTCTTAGCACAGCGAGAG +
Preference number: 5 (lower is better)
Translates to: YGGRFADSRVGSENQFHKKCEVG*LLAQRE
Trigger: CTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTT...TTTGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp GAAGAAATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATAAATGCGAAGTAGGCTaGCTCTTAGCACAGCGAGAG +
Preference number: 5 (lower is better)
Translates to: EEMRSRLALSTARDHSRYKCEVG*LLAQRE
Trigger: CTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTT...ATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp GAAGAAATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATTTACTACAGTGCACCTaGGCAGCAGTCAGCACTGTT +
Preference number: 5 (lower is better)
Translates to: EEMRSRLALSTARDHSRYLLQCT*AAVSTV
Trigger: AACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTAA...ATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp TTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATTTTACTACAGTGCACCTaGGCAGCAGTCAGCACTGTT +
Preference number: 5 (lower is better)
Translates to: LILCPWVVGSKFYLQSSILLQCT*AAVSTV
Trigger: AACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTAA...AATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp CTAGATATGGCTATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTTGTCATTTTGTTaGCACGGTGCCACACCAGTC +
Preference number: 5 (lower is better)
Translates to: LDMAMEEGLQTAGSVQKINLSFC*HGATPV
Trigger: GACTGGTGTGGCACCGTGCAAACAAAATGACAAATT...GATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATAGCCATATCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp CAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGTGTCTCCAGACACCCTaGATGAGAAAATACATTTTC +
Preference number: 5 (lower is better)
Translates to: QSIKSTSTWKYRLGLCTVCLQTP*MRKYIF
Trigger: GAAAATGTATTTTCTCATCAAGGGTGTCTGGAGACA...CACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp AGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTAACACCACCGCACACGGGCTTCACTaGTGTCTATTCAGATGCGCA +
Preference number: 5 (lower is better)
Translates to: SFGTDLLLLSHFPQLNTTAHGLH*CLFRCA
Trigger: TGCGCATCTGAATAGACACAAGTGAAGCCCGTGTGC...GGTGGTGTTAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp ATGAAATGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAAGCCCAGGCATCTAGGTaGTCCCAGAGATGGACGGTG +
Preference number: 5 (lower is better)
Translates to: MKCPSKSLCYLQVTHCKEAQASR*SQRWTV
Trigger: CACCGTCCATCTCTGGGACAACCTAGATGCCTGGGC...TTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACATTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000505246.5
CDS-3UTR CAA 90 bp CAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGAAGAGAAGATTTCTCTaGCTCCACTTCAGAAATCTG +
Preference number: 5 (lower is better)
Translates to: QSIKSTSTWKYRLGLCTVKRRFL*LHFRNL
Trigger: CAGATTTCTGAAGTGGAGCAAGAGAAATCTTCTCTT...CACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CAA 90 bp TTCTGTCTTAGAAGCACATTTCAGGAAACAAGAGTGGCGCTGACCACGGTCACCGGCAGCAAGTTTTATTaGCAAAGCAGCATTAGCAAA +
Preference number: 5 (lower is better)
Translates to: FCLRSTFQETRVALTTVTGSKFY*QSSISK
Trigger: TTTGCTAATGCTGCTTTGCAAATAAAACTTGCTGCC...GGTGACCGTGGTCAGCGCCACTCTTGTTTCCTGAAATGTGCTTCTAAGACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp ATGCACTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAATGCTGAAATGCACTaGATTTTATGCCCGTGGGTG +
Preference number: 5 (lower is better)
Translates to: MHLILCPWVVGSKFYLQSNAEMH*ILCPWV
Trigger: CACCCACGGGCATAAAATCAAGTGCATTTCAGCATT...GCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp TTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATGGAGGAAGGTTTGAATGCTGAAATGCACTaGATTTTATGCCCGTGGGTG +
Preference number: 5 (lower is better)
Translates to: LLLAQREITLDMAMEEGLNAEMH*ILCPWV
Trigger: CACCCACGGGCATAAAATCAAGTGCATTTCAGCATT...CAAACCTTCCTCCATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp TTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATGGAGGAAGGTTTGAATTTGTCATTTTGTTaGCACGGTGCCACACCAGTC +
Preference number: 5 (lower is better)
Translates to: LLLAQREITLDMAMEEGLNLSFC*HGATPV
Trigger: GACTGGTGTGGCACCGTGCAAACAAAATGACAAATT...CAAACCTTCCTCCATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp CAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGCACTGTGACTGATTTATTGCTCTaGAGTCATTTTCCACAGCTT +
Preference number: 5 (lower is better)
Translates to: QSIKSTSTWKYRLGLCTVTDLLL*SHFPQL
Trigger: AAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGT...CACAGTGCAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp TTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATTATGCGCAGGGAAGCTTaGGCACTGATTTATTGCTCT +
Preference number: 5 (lower is better)
Translates to: LILCPWVVGSKFYLQSSIMRREA*ALIYCS
Trigger: AGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGCAT...AATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp CTCGTTCTCTATGCCACTTACTTACTACAGTGCACCTTGGCAGCAGTCAGCACTAAGTCCCTTTGTTATTaGCAAGTGACACATTGTAAG +
Preference number: 5 (lower is better)
Translates to: LVLYATYLLQCTLAAVSTKSLCY*QVTHCK
Trigger: CTTACAATGTGTCACTTGCAAATAACAAAGGGACTT...AGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGTAAGTGGCATAGAGAACGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp ACACGGGCTTCACTTGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTGATTAAGTCCCTTTGTTATTaGCAAGTGACACATTGTAAG +
Preference number: 5 (lower is better)
Translates to: TRASLVSIQMRREALALIKSLCY*QVTHCK
Trigger: CTTACAATGTGTCACTTGCAAATAACAAAGGGACTT...AATCAGTGCCAAAGCTTCCCTGCGCATCTGAATAGACACAAGTGAAGCCCGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp GAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGGGCAGCAAGTTTTATTaGCAAAGCAGCATTAGCAAA +
Preference number: 5 (lower is better)
Translates to: EFTVNKVHVYLEIQARPLGSKFY*QSSISK
Trigger: TTTGCTAATGCTGCTTTGCAAATAAAACTTGCTGCC...CAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp TATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACAAAAATGCTGAAATGCACTaGATTTTATGCCCGTGGGTG +
Preference number: 5 (lower is better)
Translates to: YGGRFADSRVGSENQFHKNAEMH*ILCPWV
Trigger: CACCCACGGGCATAAAATCAAGTGCATTTCAGCATT...TTTGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp ATGAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTTGAAATTTGTCATTTaGTTTGCACGGTGCCACACC +
Preference number: 5 (lower is better)
Translates to: MNSQSIKSTSTWKYRLGLLKFVI*FARCHT
Trigger: GGTGTGGCACCGTGCAAACAAAATGACAAATTTCAA...GAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CAA 90 bp ATCCCAGTAAAGGAGCTAAATGAAGATCTTAACATGAAAAGTGGTGTCAGAGCTCTGCTAGCTGGCCTTTaGTGCTGTCTTGGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: IPVKELNEDLNMKSGVRALLAGL*CCLGSS
Trigger: TGAAGACCCAAGACAGCACAAAAGGCCAGCTAGCAG...AGCTCTGACACCACTTTTCATGTTAAGATCTTCATTTAGCTCCTTTACTGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421177.6
CDS-3UTR CAA 90 bp GAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCTGAAGAGAAGATTTCTCTaGCTCCACTTCAGAAATCTG +
Preference number: 5 (lower is better)
Translates to: EFTVNKVHVYLEIQARPLKRRFL*LHFRNL
Trigger: CAGATTTCTGAAGTGGAGCAAGAGAAATCTTCTCTT...CAGAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS-3UTR CAA 90 bp ATGAAATGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACGTGCTTTCCCTTTCTaGCGGTCAGGTTCATACTCG +
Preference number: 5 (lower is better)
Translates to: MKCPSKSLCYLQVTHCKERAFPF*RSGSYS
Trigger: CGAGTATGAACCTGACCGCAAGAAAGGGAAAGCACG...TTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACATTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp TGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTTGAGTTCCCTCAAAGTCCCTTaGTTATTTGCAAGTGACACA +
Preference number: 5 (lower is better)
Translates to: CVYSDAQGSFGTDLLLLSSLKVP*LFASDT
Trigger: TGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGA...ACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGCATCTGAATAGACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp TTCTCTATGCCACTTACTTACTACAGTGCACCTTGGCAGCAGTCAGCACTGTTAGGCAGCAAGTTTTATTaGCAAAGCAGCATTAGCAAA +
Preference number: 5 (lower is better)
Translates to: FSMPLTYYSAPWQQSALLGSKFY*QSSISK
Trigger: TTTGCTAATGCTGCTTTGCAAATAAAACTTGCTGCC...TAACAGTGCTGACTGCTGCCAAGGTGCACTGTAGTAAGTAAGTGGCATAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp GCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTGGCAGCAAGTTTTATTaGCAAAGCAGCATTAGCAAA +
Preference number: 5 (lower is better)
Translates to: AQGSFGTDLLLLSHFPQLGSKFY*QSSISK
Trigger: TTTGCTAATGCTGCTTTGCAAATAAAACTTGCTGCC...AAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp CTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAGCATGGCAGCAAGTTTTATTaGCAAAGCAGCATTAGCAAA +
Preference number: 5 (lower is better)
Translates to: LDFMPVGGRQQVLFAKQHGSKFY*QSSISK
Trigger: TTTGCTAATGCTGCTTTGCAAATAAAACTTGCTGCC...ATGCTGCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp ATGCACTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCGGCAGCAAGTTTTATTaGCAAAGCAGCATTAGCAAA +
Preference number: 5 (lower is better)
Translates to: MHLILCPWVVGSKFYLQSGSKFY*QSSISK
Trigger: TTTGCTAATGCTGCTTTGCAAATAAAACTTGCTGCC...GCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp AGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTAACACCACCAATTTGTCATTTTGTTaGCACGGTGCCACACCAGTC +
Preference number: 5 (lower is better)
Translates to: SFGTDLLLLSHFPQLNTTNLSFC*HGATPV
Trigger: GACTGGTGTGGCACCGTGCAAACAAAATGACAAATT...GGTGGTGTTAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp GAAGAAATGCGAAGTAGGCTTGCTCTTAGCACAGCGAGAGATCACTCTAGATATTTGAAATTTGTCATTTaGTTTGCACGGTGCCACACC +
Preference number: 5 (lower is better)
Translates to: EEMRSRLALSTARDHSRYLKFVI*FARCHT
Trigger: GGTGTGGCACCGTGCAAACAAAATGACAAATTTCAA...ATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAAGCCTACTTCGCATTTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp ATGAAATGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTGCTAGCTGGCCTTTaGTGCTGTCTTGGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: MKCPSKSLCYLQVTHCKELLAGL*CCLGSS
Trigger: TGAAGACCCAAGACAGCACAAAAGGCCAGCTAGCAG...TTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACATTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000505246.5
CDS-3UTR CAA 90 bp TTGCTCTTAGCACAGCGAGAGATCACTCTAGATATGGCTATGGAGGAAGGTTTGAAGTCCCTTTGTTATTaGCAAGTGACACATTGTAAG +
Preference number: 5 (lower is better)
Translates to: LLLAQREITLDMAMEEGLKSLCY*QVTHCK
Trigger: CTTACAATGTGTCACTTGCAAATAACAAAGGGACTT...CAAACCTTCCTCCATAGCCATATCTAGAGTGATCTCTCGCTGTGCTAAGAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp ATGCACTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCAAGTCCCTTTGTTATTaGCAAGTGACACATTGTAAG +
Preference number: 5 (lower is better)
Translates to: MHLILCPWVVGSKFYLQSKSLCY*QVTHCK
Trigger: CTTACAATGTGTCACTTGCAAATAACAAAGGGACTT...GCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp TGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTTGCCTCCCTCAAAGTCCCTTaGTTATTTGCAAGTGACACA +
Preference number: 5 (lower is better)
Translates to: CPSKSLCYLQVTHCKELASLKVP*LFASDT
Trigger: TGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGA...GGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp GGAAGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTAACACCTTGAAATTTGTCATTTaGTTTGCACGGTGCCACACC +
Preference number: 5 (lower is better)
Translates to: GSFGTDLLLLSHFPQLNTLKFVI*FARCHT
Trigger: GGTGTGGCACCGTGCAAACAAAATGACAAATTTCAA...GGTGTTAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp TGTGTCTATTCAGATGCGCAGGGAAGCTTTGGCACTGATTTATTGCTCTTGAGTTGTCTCCAGACACCCTaGATGAGAAAATACATTTTC +
Preference number: 5 (lower is better)
Translates to: CVYSDAQGSFGTDLLLLSCLQTP*MRKYIF
Trigger: GAAAATGTATTTTCTCATCAAGGGTGTCTGGAGACA...ACTCAAGAGCAATAAATCAGTGCCAAAGCTTCCCTGCGCATCTGAATAGACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp TATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACAAATGTCTCCAGACACCCTaGATGAGAAAATACATTTTC +
Preference number: 5 (lower is better)
Translates to: YGGRFADSRVGSENQFHKCLQTP*MRKYIF
Trigger: GAAAATGTATTTTCTCATCAAGGGTGTCTGGAGACA...TTTGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
CDS-3UTR CAA 90 bp ATGCACTTGATTTTATGCCCGTGGGTGGTCGGCAGCAAGTTTTATTTGCAAAGCACTGATTTATTGCTCTaGAGTCATTTTCCACAGCTT +
Preference number: 5 (lower is better)
Translates to: MHLILCPWVVGSKFYLQSTDLLL*SHFPQL
Trigger: AAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGT...GCTTTGCAAATAAAACTTGCTGCCGACCACCCACGGGCATAAAATCAAGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp ATGAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAATACAGGCTCGGCCTCACTGATTTATTGCTCTaGAGTCATTTTCCACAGCTT +
Preference number: 5 (lower is better)
Translates to: MNSQSIKSTSTWKYRLGLTDLLL*SHFPQL
Trigger: AAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGT...GAGGCCGAGCCTGTATTTCCAGGTAGACGTGGACTTTATTGACTGTGAATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp TATGGAGGAAGGTTTGCAGACAGCAGGGTCGGTTCAGAAAATCAATTCCACAAAAAGTCCCTTTGTTATTaGCAAGTGACACATTGTAAG +
Preference number: 5 (lower is better)
Translates to: YGGRFADSRVGSENQFHKKSLCY*QVTHCK
Trigger: CTTACAATGTGTCACTTGCAAATAACAAAGGGACTT...TTTGTGGAATTGATTTTCTGAACCGACCCTGCTGTCTGCAAACCTTCCTCCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp TGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTTGCCGGCAGCAAGTTTTATTaGCAAAGCAGCATTAGCAAA +
Preference number: 5 (lower is better)
Translates to: CPSKSLCYLQVTHCKELAGSKFY*QSSISK
Trigger: TTTGCTAATGCTGCTTTGCAAATAAAACTTGCTGCC...GGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp TGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTTGCCAAGAGAAGATTTCTCTaGCTCCACTTCAGAAATCTG +
Preference number: 5 (lower is better)
Translates to: CPSKSLCYLQVTHCKELAKRRFL*LHFRNL
Trigger: CAGATTTCTGAAGTGGAGCAAGAGAAATCTTCTCTT...GGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421177.6
ENST00000505246.5
ENST00000513555.5
CDS-3UTR CAA 90 bp TCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTTGCCCATCCCAAGTCCCTTTGTTATTaGCAAGTGACACATTGTAAG +
Preference number: 5 (lower is better)
Translates to: SKSLCYLQVTHCKELAHPKSLCY*QVTHCK
Trigger: CTTACAATGTGTCACTTGCAAATAACAAAGGGACTT...GGGATGGGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp ATGAAATGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAAAATGCTGAAATGCACTaGATTTTATGCCCGTGGGTG +
Preference number: 5 (lower is better)
Translates to: MKCPSKSLCYLQVTHCKENAEMH*ILCPWV
Trigger: CACCCACGGGCATAAAATCAAGTGCATTTCAGCATT...TTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACATTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp TGTCCCTCAAAGTCCCTTTGTTATTTGCAAGTGACACATTGTAAGGAACTTGCCACTGATTTATTGCTCTaGAGTCATTTTCCACAGCTT +
Preference number: 5 (lower is better)
Translates to: CPSKSLCYLQVTHCKELATDLLL*SHFPQL
Trigger: AAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGT...GGCAAGTTCCTTACAATGTGTCACTTGCAAATAACAAAGGGACTTTGAGGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS-3UTR CAA 90 bp AGCTTTGGCACTGATTTATTGCTCTTGAGTCATTTTCCACAGCTTAACACCACCTTTGGCACTGATTTATaGCTCTTGAGTCATTTTCCA +
Preference number: 5 (lower is better)
Translates to: SFGTDLLLLSHFPQLNTTFGTDL*LLSHFP
Trigger: TGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAA...GGTGGTGTTAAGCTGTGGAAAATGACTCAAGAGCAATAAATCAGTGCCAAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS CAA 90 bp CTGGGTGCGCGCGGGTGGGTGCGCGCGTGTGGCCGCGCCTCCACCTaGACGCAGCGCCCGCCCGGCCGCACAAAGGAGTGCGGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: LGARGWVRACGRAST*TQRPPGRTKECGAG
Trigger: CCCAGCCCCGCACTCCTTTGTGCGGCCGGGCGGGCGCTGCGTCAAGGTGGAGGCGCGGCCACACGCGCGCACCCACCCGCGCGCACCCAG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421177.6
CDS CAA 72 bp CGCGGGTGGGTGCGCGCGTGTGGCCGCGCCTCCACCTaGACGCAGCGCCCGCCCGGCCGCACAAAGGAGTGC +
Preference number: 6 (lower is better)
Translates to: RGWVRACGRAST*TQRPPGRTKEC
Trigger: GCACTCCTTTGTGCGGCCGGGCGGGCGCTGCGTCAAGGTGGAGGCGCGGCCACACGCGCGCACCCACCCGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421177.6
CDS CCA 72 bp GGTGGTGCGGGAGGCGGAGTAGCGCTCTCCCAGGGCTaGGGTGTGGGCGCCCAGGGTGAGGCTGCCCCAGGC +
Preference number: 6 (lower is better)
Translates to: GGAGGGVALSQG*GVGAQGEAAPG
Trigger: GCCTGGGGCAGCCTCACCCTGGGCGCCCACACCCCAGCCCTGGGAGAGCGCTACTCCGCCTCCCGCACCACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS GCA 72 bp GGCAGGTCAGCTGAGCGCTCCGAGCTCCGCGTCTCCTaGTCCTGCTCGCAGCAATGGCGGAGGCGGCGCCGC +
Preference number: 6 (lower is better)
Translates to: GRSAERSELRVS*SCSQQWRRRRR
Trigger: GCGGCGCCGCCTCCGCCATTGCTGCGAGCAGGAGCAGGAGACGCGGAGCTCGGAGCGCTCAGCTGACCTGCC
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421177.6
ENST00000513829.5
ENST00000621129.4
CDS GCA 72 bp GGCGCGGCCCGTAAAGGAGGAGGAGGTTTTCGGTGGTaGGGGAGGCGGAGTAGCGCTCTCCCAGGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: GAARKGGGGFRW*GRRSSALPGLG
Trigger: CCCCAGCCCTGGGAGAGCGCTACTCCGCCTCCCGCACCACCGAAAACCTCCTCCTCCTTTACGGGCCGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS CAA 90 bp TCAGTGCGCCGCTTGGAGGGAGGCGGAAAGGTTCCTCCGCTCTGGTaGGCAGAGAAGGTGGAGGTCCCACTGCAGCCGCCGCCCGAGCAT +
Preference number: 6 (lower is better)
Translates to: SVRRLEGGGKVPPLW*AEKVEVPLQPPPEH
Trigger: ATGCTCGGGCGGCGGCTGCAGTGGGACCTCCACCTTCTCTGCCAACCAGAGCGGAGGAACCTTTCCGCCTCCCTCCAAGCGGCGCACTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS CCA 72 bp GCTTGGAGGGAGGCGGAAAGGTTCCTCCGCTCTGGTTaGCAGAGAAGGTGGAGGTCCCACTGCAGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: AWREAERFLRSG*QRRWRSHCSRR
Trigger: GCGGCGGCTGCAGTGGGACCTCCACCTTCTCTGCCAACCAGAGCGGAGGAACCTTTCCGCCTCCCTCCAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS CCA 72 bp CGCCGCTTGGAGGGAGGCGGAAAGGTTCCTCCGCTCTaGTTGGCAGAGAAGGTGGAGGTCCCACTGCAGCCG +
Preference number: 6 (lower is better)
Translates to: RRLEGGGKVPPL*LAEKVEVPLQP
Trigger: CGGCTGCAGTGGGACCTCCACCTTCTCTGCCAACCAGAGCGGAGGAACCTTTCCGCCTCCCTCCAAGCGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS GCA 72 bp CAGCCGCTGTCGCGGCTTCCCAGAGAGGGTCCTGTTTaGAGACCTCCAACCCGTCCTGCCTGCAGGACTCAC +
Preference number: 6 (lower is better)
Translates to: QPLSRLPREGPV*RPPTRPACRTH
Trigger: GTGAGTCCTGCAGGCAGGACGGGTTGGAGGTCTGCAAACAGGACCCTCTCTGGGAAGCCGCGACAGCGGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS CCA 72 bp TGCCTGCAGGACTCACGGATGAAAGACTATGGGGTGTaGGGGCGAGGCCGAAATGGGAGTGGAGCCCGCGCG +
Preference number: 6 (lower is better)
Translates to: CLQDSRMKDYGV*GRGRNGSGARA
Trigger: CGCGCGGGCTCCACTCCCATTTCGGCCTCGCCCCCACACCCCATAGTCTTTCATCCGTGAGTCCTGCAGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS CCA 72 bp CCCGTCCTGCCTGCAGGACTCACGGATGAAAGACTATaGGGTGTGGGGGCGAGGCCGAAATGGGAGTGGAGC +
Preference number: 6 (lower is better)
Translates to: PVLPAGLTDERL*GVGARPKWEWS
Trigger: GCTCCACTCCCATTTCGGCCTCGCCCCCACACCCCATAGTCTTTCATCCGTGAGTCCTGCAGGCAGGACGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS CAA 72 bp TCAGCCGCTGTCGCGGCTTCCCAGAGAGGGTCCTGTTaGCAGACCTCCAACCCGTCCTGCCTGCAGGACTCA +
Preference number: 6 (lower is better)
Translates to: SAAVAASQRGSC*QTSNPSCLQDS
Trigger: TGAGTCCTGCAGGCAGGACGGGTTGGAGGTCTGCAAACAGGACCCTCTCTGGGAAGCCGCGACAGCGGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS CAA 90 bp ACCCCGAGCTCAGCCGCTGTCGCGGCTTCCCAGAGAGGGTCCTGTTaGCAGACCTCCAACCCGTCCTGCCTGCAGGACTCACGGATGAAA +
Preference number: 6 (lower is better)
Translates to: TPSSAAVAASQRGSC*QTSNPSCLQDSRMK
Trigger: TTTCATCCGTGAGTCCTGCAGGCAGGACGGGTTGGAGGTCTGCAAACAGGACCCTCTCTGGGAAGCCGCGACAGCGGCTGAGCTCGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS CAA 90 bp AGCGGGAGGGAAGTCGTTCTAGGCAAAGAGCGCTCAGTGCGCCGCTaGGAGGGAGGCGGAAAGGTTCCTCCGCTCTGGTTGGCAGAGAAG +
Preference number: 6 (lower is better)
Translates to: SGREVVLGKERSVRR*EGGGKVPPLWLAEK
Trigger: CTTCTCTGCCAACCAGAGCGGAGGAACCTTTCCGCCTCCCTCCAAGCGGCGCACTGAGCGCTCTTTGCCTAGAACGACTTCCCTCCCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS TCA 72 bp AGACCTCCAACCCGTCCTGCCTGCAGGACTCACGGATaGAAGACTATGGGGTGTGGGGGCGAGGCCGAAATG +
Preference number: 6 (lower is better)
Translates to: RPPTRPACRTHG*KTMGCGGEAEM
Trigger: CATTTCGGCCTCGCCCCCACACCCCATAGTCTTTCATCCGTGAGTCCTGCAGGCAGGACGGGTTGGAGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS CAA 72 bp GAAGTCGTTCTAGGCAAAGAGCGCTCAGTGCGCCGCTaGGAGGGAGGCGGAAAGGTTCCTCCGCTCTGGTTG +
Preference number: 6 (lower is better)
Translates to: EVVLGKERSVRR*EGGGKVPPLWL
Trigger: CAACCAGAGCGGAGGAACCTTTCCGCCTCCCTCCAAGCGGCGCACTGAGCGCTCTTTGCCTAGAACGACTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000513555.5
CDS GCA 72 bp AGGGGAATGGTGTCGAAGCCATCCTCCAGCAGCGGCTaGTTGGTGCCCTTCTCTGCGAAATTGTTCCCCAAC +
Preference number: 6 (lower is better)
Translates to: RGMVSKPSSSSG*LVPFSAKLFPN
Trigger: GTTGGGGAACAATTTCGCAGAGAAGGGCACCAAGCAGCCGCTGCTGGAGGATGGCTTCGACACCATTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000506380.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS TCA 72 bp TGTACACCTTGTAGACAACCAGGAAGACGACGCAGGTaGGGAAGGCCAGGGCGAAGAGGACCAACACGGAGA +
Preference number: 6 (lower is better)
Translates to: CTPCRQPGRRRR*GRPGRRGPTRR
Trigger: TCTCCGTGTTGGTCCTCTTCGCCCTGGCCTTCCTCACCTGCGTCGTCTTCCTGGTTGTCTACAAGGTGTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000506380.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS CCA 72 bp GGAGTCTTGCTCCGCGTAGTAGCTCTCCAAGCCTTCTaGGATGCACTGGGTGTTCTTGAGGACGAACCCATC +
Preference number: 6 (lower is better)
Translates to: GVLLRVVALQAF*DALGVLEDEPI
Trigger: GATGGGTTCGTCCTCAAGAACACCCAGTGCATCCCAGAAGGCTTGGAGAGCTACTACGCGGAGCAAGACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000506380.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS CAA 72 bp GGAATGGTGTCGAAGCCATCCTCCAGCAGCGGCTGCTaGGTGCCCTTCTCTGCGAAATTGTTCCCCAACTTC +
Preference number: 6 (lower is better)
Translates to: GMVSKPSSSSGC*VPFSAKLFPNF
Trigger: GAAGTTGGGGAACAATTTCGCAGAGAAGGGCACCAAGCAGCCGCTGCTGGAGGATGGCTTCGACACCATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000506380.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS CAA 72 bp GACACCCTCCGTGATGCTGACGGTGAACTCAGCAATTaGGGGAGGACGTGCTTTCCCTTTCTTGCGGTCAGG +
Preference number: 6 (lower is better)
Translates to: DTLRDADGELSN*GRTCFPFLAVR
Trigger: CCTGACCGCAAGAAAGGGAAAGCACGTCCTCCCCAAATTGCTGAGTTCACCGTCAGCATCACGGAGGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000505246.5
ENST00000506380.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS CAA 90 bp GTCATCAGGGGAATGGTGTCGAAGCCATCCTCCAGCAGCGGCTGCTaGGTGCCCTTCTCTGCGAAATTGTTCCCCAACTTCACCATCGTT +
Preference number: 6 (lower is better)
Translates to: VIRGMVSKPSSSSGC*VPFSAKLFPNFTIV
Trigger: AACGATGGTGAAGTTGGGGAACAATTTCGCAGAGAAGGGCACCAAGCAGCCGCTGCTGGAGGATGGCTTCGACACCATTCCCCTGATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000506380.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS CCA 72 bp ACACCCTCCGTGATGCTGACGGTGAACTCAGCAATTTaGGGAGGACGTGCTTTCCCTTTCTTGCGGTCAGGT +
Preference number: 6 (lower is better)
Translates to: TPSVMLTVNSAI*GGRAFPFLRSG
Trigger: ACCTGACCGCAAGAAAGGGAAAGCACGTCCTCCCCAAATTGCTGAGTTCACCGTCAGCATCACGGAGGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000505246.5
ENST00000506380.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS CAA 90 bp CACTTTGATGCCTCCCTGAAGCAGGTGAAGAAGAGAAGATTTCTCTaGCTCCACTTCAGAAATCTGCCCAGGCATCGCGAGGGTCCGTGG +
Preference number: 6 (lower is better)
Translates to: HFDASLKQVKKRRFL*LHFRNLPRHREGPW
Trigger: CCACGGACCCTCGCGATGCCTGGGCAGATTTCTGAAGTGGAGCAAGAGAAATCTTCTCTTCTTCACCTGCTTCAGGGAGGCATCAAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513555.5
CDS CAA 72 bp GCACCAGAAGTAACCAATTCCAGACACACCAGCACTTaGGGAGGCCAAGACCAGCAGATCACAAGGTCAGGA +
Preference number: 6 (lower is better)
Translates to: APEVTNSRHTST*GGQDQQITRSG
Trigger: TCCTGACCTTGTGATCTGCTGGTCTTGGCCTCCCAAAGTGCTGGTGTGTCTGGAATTGGTTACTTCTGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000513555.5
CDS CAA 90 bp GTAGTGGTTTATGACTGTGTAAAATTTCTCCCGGGCACTGGAGTCTaGCTCCGCGTAGTAGCTCTCCAAGCCTTCTGGGATGCACTGGGT +
Preference number: 6 (lower is better)
Translates to: VVVYDCVKFLPGTGV*LRVVALQAFWDALG
Trigger: ACCCAGTGCATCCCAGAAGGCTTGGAGAGCTACTACGCGGAGCAAGACTCCAGTGCCCGGGAGAAATTTTACACAGTCATAAACCACTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000506380.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS CCA 72 bp CAGAAATCTGCCCAGGCATCTAGGTTGTCCCAGAGATaGACGGTGAACAATCATGTTTCTCTGCTAGCTGGC +
Preference number: 6 (lower is better)
Translates to: QKSAQASRLSQR*TVNNHVSLLAG
Trigger: GCCAGCTAGCAGAGAAACATGATTGTTCACCGTCCATCTCTGGGACAACCTAGATGCCTGGGCAGATTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000505246.5
CDS CAA 72 bp TATGACTGTGTAAAATTTCTCCCGGGCACTGGAGTCTaGCTCCGCGTAGTAGCTCTCCAAGCCTTCTGGGAT +
Preference number: 6 (lower is better)
Translates to: YDCVKFLPGTGV*LRVVALQAFWD
Trigger: ATCCCAGAAGGCTTGGAGAGCTACTACGCGGAGCAAGACTCCAGTGCCCGGGAGAAATTTTACACAGTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000504171.1
ENST00000505246.5
ENST00000506380.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS CAA 90 bp CTGACGGTGAACTCAGCAATTTGGGGAGGACGTGCTTTCCCTTTCTaGCGGTCAGGTTCATACTCGGTCTTAGTTTTCACGACCACCTTA +
Preference number: 6 (lower is better)
Translates to: LTVNSAIWGGRAFPF*RSGSYSVLVFTTTL
Trigger: TAAGGTGGTCGTGAAAACTAAGACCGAGTATGAACCTGACCGCAAGAAAGGGAAAGCACGTCCTCCCCAAATTGCTGAGTTCACCGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000505246.5
ENST00000506380.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS CAA 90 bp CAGAGATGGACGGTGAACAATCATGTTTCTCTGCTAGCTGGCCTTTaGTGCTGTCTTGGGTCTTCACTGGTGCTGGTCATTGGGACTGTT +
Preference number: 6 (lower is better)
Translates to: QRWTVNNHVSLLAGL*CCLGSSLVLVIGTV
Trigger: AACAGTCCCAATGACCAGCACCAGTGAAGACCCAAGACAGCACAAAAGGCCAGCTAGCAGAGAAACATGATTGTTCACCGTCCATCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421177.6
ENST00000504347.1
ENST00000505246.5
CDS GCA 72 bp GTGAACAATCATGTTTCTCTGCTAGCTGGCCTTTTGTaGTGTCTTGGGTCTTCACTGGTGCTGGTCATTGGG +
Preference number: 6 (lower is better)
Translates to: VNNHVSLLAGLL*CLGSSLVLVIG
Trigger: CCCAATGACCAGCACCAGTGAAGACCCAAGACAGCACAAAAGGCCAGCTAGCAGAGAAACATGATTGTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421177.6
ENST00000504347.1
ENST00000505246.5
CDS CCA 72 bp CTGGCCTTTTGTGCTGTCTTGGGTCTTCACTGGTGCTaGTCATTGGGACTGTTTCATCCTGTGGTTTTCTTC +
Preference number: 6 (lower is better)
Translates to: LAFCAVLGLHWC*SLGLFHPVVFF
Trigger: GAAGAAAACCACAGGATGAAACAGTCCCAATGACCAGCACCAGTGAAGACCCAAGACAGCACAAAAGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421177.6
ENST00000504347.1
ENST00000505246.5
CDS CCA 72 bp GAGATGGACGGTGAACAATCATGTTTCTCTGCTAGCTaGCCTTTTGTGCTGTCTTGGGTCTTCACTGGTGCT +
Preference number: 6 (lower is better)
Translates to: EMDGEQSCFSAS*PFVLSWVFTGA
Trigger: AGCACCAGTGAAGACCCAAGACAGCACAAAAGGCCAGCTAGCAGAGAAACATGATTGTTCACCGTCCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421177.6
ENST00000504347.1
ENST00000505246.5
CDS CAA 90 bp CACTTTGATGCCTCCCTGAAGCAGGTGAAGAAGAGAAGATTTCTCTaGCTCCACTTCAGAAATCTGCCCAGGCATCTAGGTTGTCCCAGA +
Preference number: 6 (lower is better)
Translates to: HFDASLKQVKKRRFL*LHFRNLPRHLGCPR
Trigger: TCTGGGACAACCTAGATGCCTGGGCAGATTTCTGAAGTGGAGCAAGAGAAATCTTCTCTTCTTCACCTGCTTCAGGGAGGCATCAAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421177.6
ENST00000505246.5
CDS CAA 90 bp AGACTCTGTCAACTGAGGAGGACAGAAAGGCAAGAAGGACCTAGGTaGTCCCAGAGATGGACGGTGAACAATCATGTTTCTCTGCTAGCT +
Preference number: 6 (lower is better)
Translates to: RLCQLRRTERQEGPR*SQRWTVNNHVSLLA
Trigger: AGCTAGCAGAGAAACATGATTGTTCACCGTCCATCTCTGGGACAACCTAGGTCCTTCTTGCCTTTCTGTCCTCCTCAGTTGACAGAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504347.1
CDS CAA 72 bp AACTCAGCAATTTGGGGAGGACGTGCTTTCCCTTTCTaGCGGTCAGGTTCATACTCGGTCTTAGTTTTCACG +
Preference number: 6 (lower is better)
Translates to: NSAIWGGRAFPF*RSGSYSVLVFT
Trigger: CGTGAAAACTAAGACCGAGTATGAACCTGACCGCAAGAAAGGGAAAGCACGTCCTCCCCAAATTGCTGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000397958.5
ENST00000421177.6
ENST00000433139.6
ENST00000505246.5
ENST00000506380.5
ENST00000513555.5
ENST00000513829.5
ENST00000621129.4
CDS CAA 72 bp CAACTGAGGAGGACAGAAAGGCAAGAAGGACCTAGGTaGTCCCAGAGATGGACGGTGAACAATCATGTTTCT +
Preference number: 6 (lower is better)
Translates to: QLRRTERQEGPR*SQRWTVNNHVS
Trigger: AGAAACATGATTGTTCACCGTCCATCTCTGGGACAACCTAGGTCCTTCTTGCCTTTCTGTCCTCCTCAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504347.1