RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NSD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000109685

Ensembl transcript IDs: ENST00000312087.10, ENST00000353275.9, ENST00000382888.3, ENST00000382891.9, ENST00000382892.6, ENST00000382895.7, ENST00000398261.6, ENST00000420906.6, ENST00000482415.6, ENST00000503128.5, ENST00000505643.5, ENST00000507094.1, ENST00000507820.5, ENST00000508355.5, ENST00000508803.6, ENST00000509115.5, ENST00000511904.1, ENST00000512700.2, ENST00000513726.5, ENST00000514045.5, ENST00000514329.5, ENST00000515695.1, ENST00000515806.1, ENST00000677559.1, ENST00000677895.1, ENST00000678714.1, ENST00000679039.1

Found 3774 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTaGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTC +
Preference number: 1 (lower is better)
Translates to: GGEALPPEEACTSVS*RLELGPPGQFMLAL
Trigger: GAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR CCA 90 bp TCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTaGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCAGG +
Preference number: 1 (lower is better)
Translates to: SLPRRPVRLCPGGSS*VLRASSCSPSPAGR
Trigger: CCTGCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR CCA 90 bp GGCAGGGCCGAGAGCCAGCCACACCCACGGTCACAGCTGGGGGCGTaGTCAGCCCCAGTGGCGAGAAACCCTGCAAGCTCAGGGCCGCTA +
Preference number: 1 (lower is better)
Translates to: GRAESQPHPRSQLGA*SAPVARNPASSGPL
Trigger: TAGCGGCCCTGAGCTTGCAGGGTTTCTCGCCACTGGGGCTGACCACGCCCCCAGCTGTGACCGTGGGTGTGGCTGGCTCTCGGCCCTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR CCA 90 bp CAAAGCTGGGCAGGGCCGAGAGCCAGCCACACCCACGGTCACAGCTaGGGGCGTGGTCAGCCCCAGTGGCGAGAAACCCTGCAAGCTCAG +
Preference number: 1 (lower is better)
Translates to: QSWAGPRASHTHGHS*GRGQPQWRETLQAQ
Trigger: CTGAGCTTGCAGGGTTTCTCGCCACTGGGGCTGACCACGCCCCCAGCTGTGACCGTGGGTGTGGCTGGCTCTCGGCCCTGCCCAGCTTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR CCA 90 bp CGGTCATCAGTGCAGACGCAGCGGACGCTGCTGAGGATGGCTCAGTaGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTC +
Preference number: 1 (lower is better)
Translates to: RSSVQTQRTLLRMAQ*WGGAPSRGGLYVCV
Trigger: GACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCGTCTGCACTGATGACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR TCA 90 bp TCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTaGGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACC +
Preference number: 1 (lower is better)
Translates to: SSHGPHPASPEWRRR*EPERGQREDEFLAT
Trigger: GGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR CCA 90 bp GTGAACCTCCCTTCTGGCCTCCGGGAAAGCCCAAGGCAGGCGAGGTaGAAAGCTCCGCAGCAGGGTCCTTCACAGAGCAGGAGGCTGCCC +
Preference number: 1 (lower is better)
Translates to: VNLPSGLRESPRQAR*KAPQQGPSQSRRLP
Trigger: GGGCAGCCTCCTGCTCTGTGAAGGACCCTGCTGCGGAGCTTTCCACCTCGCCTGCCTTGGGCTTTCCCGGAGGCCAGAAGGGAGGTTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR CCA 90 bp TCATCAGTGCAGACGCAGCGGACGCTGCTGAGGATGGCTCAGTGGTaGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTG +
Preference number: 1 (lower is better)
Translates to: SSVQTQRTLLRMAQW*GGAPSRGGLYVCVL
Trigger: CAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCGTCTGCACTGATGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR TCA 90 bp GACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGCCGGCCTaGGGACGGACAGCTGGGTTCTCACTTCAGGTGCCTGAAGAGTTT +
Preference number: 1 (lower is better)
Translates to: DPASHGRVSPEERPA*GRTAGFSLQVPEEF
Trigger: AAACTCTTCAGGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR TCA 90 bp CCCAAGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTaGGGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTC +
Preference number: 1 (lower is better)
Translates to: PKQVAARTKCHLWPE*GQVAAAPNSRPALV
Trigger: GACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR CCA 90 bp CCCCCTTTGGAGCACACGAAGCACCAGCTCACGTTGACGTGGGCGTaGTGTCGCTTCCCCTTCCGAGCAGTGAAGTGGGCAGTGCAGATG +
Preference number: 1 (lower is better)
Translates to: PPLEHTKHQLTLTWA*CRFPFRAVKWAVQM
Trigger: CATCTGCACTGCCCACTTCACTGCTCGGAAGGGGAAGCGACACCACGCCCACGTCAACGTGAGCTGGTGCTTCGTGTGCTCCAAAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR CCA 90 bp AGATGTCAAGACAGACAAACACTGCGAAGGGGACCCAGCCAGCCATaGACGGGTGTCGCCGGAAGAAAGGCCGGCCTGAGGACGGACAGC +
Preference number: 1 (lower is better)
Translates to: RCQDRQTLRRGPSQP*TGVAGRKAGLRTDS
Trigger: GCTGTCCGTCCTCAGGCCGGCCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR TCA 90 bp CTAAGTCATGCTCACAGCAGTAGGACCGCCCGTCCGGGGTGCAGCTaGAGGCTGTCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGGC +
Preference number: 1 (lower is better)
Translates to: LSHAHSSRTARPGCS*RLSRPGAPYRTNWG
Trigger: GCCCCAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTTCAGCTGCACCCCGGACGGGCGGTCCTACTGCTGTGAGCATGACTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR GCA 90 bp GGGGCCTGCAGCGCCCTACGGGGCTCCCTAAGTTGTCACTTCCTGTaGTCTAAGCAGACTGCGGTCTCACGCCCTGCAAAGTCACTCCTT +
Preference number: 1 (lower is better)
Translates to: GACSALRGSLSCHFL*SKQTAVSRPAKSLL
Trigger: AAGGAGTGACTTTGCAGGGCGTGAGACCGCAGTCTGCTTAGAGCACAGGAAGTGACAACTTAGGGAGCCCCGTAGGGCGCTGCAGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR GCA 90 bp GGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTaGGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAA +
Preference number: 1 (lower is better)
Translates to: GHCTRRGLDVKTDKH*EGDPASHGRVSPEE
Trigger: TTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR CCA 90 bp AATGTTCTCTCCCTCCCTCCCAGACAAGCAGCCCCTCAGGACACGTaGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGAC +
Preference number: 1 (lower is better)
Translates to: NVLSLPPRQAAPQDT*AKAHMVPPSQGAPD
Trigger: GTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCTGAGGGGCTGCTTGTCTGGGAGGGAGGGAGAGAACATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR TCA 90 bp AGCCTTACTCCAGCCGCAGGCTCCACCTCCACGCACCAGGTGACGTaGCTCACTCGGAGAAGCCATTTGTGGAGGTGGCACATTCACCTG +
Preference number: 1 (lower is better)
Translates to: SLTPAAGSTSTHQVT*LTRRSHLWRWHIHL
Trigger: CAGGTGAATGTGCCACCTCCACAAATGGCTTCTCCGAGTGAGTCACGTCACCTGGTGCGTGGAGGTGGAGCCTGCGGCTGGAGTAAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR TCA 90 bp CAGCAAGCCTTACTCCAGCCGCAGGCTCCACCTCCACGCACCAGGTaGCGTGACTCACTCGGAGAAGCCATTTGTGGAGGTGGCACATTC +
Preference number: 1 (lower is better)
Translates to: QQALLQPQAPPPRTR*RDSLGEAICGGGTF
Trigger: GAATGTGCCACCTCCACAAATGGCTTCTCCGAGTGAGTCACGTCACCTGGTGCGTGGAGGTGGAGCCTGCGGCTGGAGTAAGGCTTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR TCA 90 bp CTTCCTGGGGACCATGGCAGAGACCTGGCCAGAAGTGCCGCCTTCTaGCTCAGCAAGAGTAAGGGGCCTGTCCAACCCTTGCCTCACTAC +
Preference number: 1 (lower is better)
Translates to: LPGDHGRDLARSAAF*LSKSKGPVQPLPHY
Trigger: GTAGTGAGGCAAGGGTTGGACAGGCCCCTTACTCTTGCTGAGTCAGAAGGCGGCACTTCTGGCCAGGTCTCTGCCATGGTCCCCAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR TCA 90 bp TCTATGTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTaGGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGG +
Preference number: 1 (lower is better)
Translates to: SMSSQGQDNCLGQGD*APLTHGQASTPLHW
Trigger: CCAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGACATAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
3UTR GCA 90 bp GGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGGTTTAGGTaGAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGG +
Preference number: 1 (lower is better)
Translates to: GHIPLWAHTGGYGFR*RCWFRMPRNPEGLG
Trigger: CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR GCA 90 bp CCACACATGGGACTGTCCCTCTCACTGCAGAGTGCTGAGTTCACTTaGCCCTGCCCACCTTCCCAATGTCCCCAGGGAACGATGTCACCC +
Preference number: 1 (lower is better)
Translates to: PHMGLSLSLQSAEFT*PCPPSQCPQGTMSP
Trigger: GGGTGACATCGTTCCCTGGGGACATTGGGAAGGTGGGCAGGGGCAAGTGAACTCAGCACTCTGCAGTGAGAGGGACAGTCCCATGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR GCA 90 bp GTGCTGGGGAGGAGCCTGGTCTGGCCGACTGCAGACAGCAGGCTGTaGACTGTCTGCGAAGGACTTGAGGACAATGACAAAACTGCCCAC +
Preference number: 1 (lower is better)
Translates to: VLGRSLVWPTADSRL*TVCEGLEDNDKTAH
Trigger: GTGGGCAGTTTTGTCATTGTCCTCAAGTCCTTCGCAGACAGTGCACAGCCTGCTGTCTGCAGTCGGCCAGACCAGGCTCCTCCCCAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR CCA 90 bp CCACGGCCGCGCGAGCAAGTCAGTGGCTACACAGCTCGTTTCCCCTaGGTCCTCTGTGTAGTTAACTTTGCTGGGGACCCTGATGGGAGA +
Preference number: 1 (lower is better)
Translates to: PRPREQVSGYTARFP*VLCVVNFAGDPDGR
Trigger: TCTCCCATCAGGGTCCCCAGCAAAGTTAACTACACAGAGGACCCAGGGGAAACGAGCTGTGTAGCCACTGACTTGCTCGCGCGGCCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR CCA 90 bp ATTGAAGCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTaGGCAGGGCCGAGAGCCAGCCACACCCACGGTCACAGCTGGGGG +
Preference number: 1 (lower is better)
Translates to: IEADVQEVTTSSEQS*AGPRASHTHGHSWG
Trigger: CCCCCAGCTGTGACCGTGGGTGTGGCTGGCTCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGCTTCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR CCA 90 bp CTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCAGGTaGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGG +
Preference number: 1 (lower is better)
Translates to: LHRLLCSRSHIAPSR*QQGPSVTCGQSEAR
Trigger: CCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR CCA 90 bp CTGCAGAAAATCCCACTCGGAGGAGTGGTCGCTGAGGATTCAGAGTaGCAAGCCGCAGAGCTCTATGAGCCCCGCCCAGGTTGCCTAGGT +
Preference number: 1 (lower is better)
Translates to: LQKIPLGGVVAEDSE*QAAELYEPRPGCLG
Trigger: ACCTAGGCAACCTGGGCGGGGCTCATAGAGCTCTGCGGCTTGCCACTCTGAATCCTCAGCGACCACTCCTCCGAGTGGGATTTTCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR GCA 90 bp ATCCCCCTGTGGGCGCACACGGGTGGGTATGGGTTTAGGTGCAGATaGTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGCGGTTT +
Preference number: 1 (lower is better)
Translates to: IPLWAHTGGYGFRCR*WFRMPRNPEGLGRF
Trigger: AAACCGCCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCCATACCCACCCGTGTGCGCCCACAGGGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR CCA 90 bp ACGTTGACGTGGGCGTGGTGTCGCTTCCCCTTCCGAGCAGTGAAGTaGGCAGTGCAGATGATGCTGTTGGAGGCGATCACTGAGCATCCT +
Preference number: 1 (lower is better)
Translates to: TLTWAWCRFPFRAVK*AVQMMLLEAITEHP
Trigger: AGGATGCTCAGTGATCGCCTCCAACAGCATCATCTGCACTGCCCACTTCACTGCTCGGAAGGGGAAGCGACACCACGCCCACGTCAACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR CCA 90 bp GCCCCAGTCCCACCATCCGTGAACAGGTCTCGACCACCACTGAGTTaGTTTGAGTCCCTGCAGAAAATCCCACTCGGAGGAGTGGTCGCT +
Preference number: 1 (lower is better)
Translates to: APVPPSVNRSRPPLS*FESLQKIPLGGVVA
Trigger: AGCGACCACTCCTCCGAGTGGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCGAGACCTGTTCACGGATGGTGGGACTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR TCA 90 bp AGCAGTGAAGTGGGCAGTGCAGATGATGCTGTTGGAGGCGATCACTaGGCATCCTGCTGCCAGACAAGCATCCCCGCTGTGATAGGCAAC +
Preference number: 1 (lower is better)
Translates to: SSEVGSADDAVGGDH*ASCCQTSIPAVIGN
Trigger: GTTGCCTATCACAGCGGGGATGCTTGTCTGGCAGCAGGATGCTCAGTGATCGCCTCCAACAGCATCATCTGCACTGCCCACTTCACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR CCA 90 bp ATGAGCCCACTCCTGGCATCTGAAGTGGGACAATGCTGCCACACATaGGACTGTCCCTCTCACTGCAGAGTGCTGAGTTCACTTGCCCCT +
Preference number: 1 (lower is better)
Translates to: MSPLLASEVGQCCHT*DCPSHCRVLSSLAP
Trigger: AGGGGCAAGTGAACTCAGCACTCTGCAGTGAGAGGGACAGTCCCATGTGTGGCAGCATTGTCCCACTTCAGATGCCAGGAGTGGGCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR CCA 90 bp TGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTaGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAA +
Preference number: 1 (lower is better)
Translates to: WQQGPSVTCGQSEAR*LLLPIQGLPLSKVK
Trigger: TTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR CCA 90 bp GTCCCTGACCTTCCTGCACTGGAAGGCCTACACTCCTCTAATGAGTaGAAACAACTGAGGCACACCCCATCCTTCCTGGGGACCATGGCA +
Preference number: 1 (lower is better)
Translates to: VPDLPALEGLHSSNE*KQLRHTPSFLGTMA
Trigger: TGCCATGGTCCCCAGGAAGGATGGGGTGTGCCTCAGTTGTTTCCACTCATTAGAGGAGTGTAGGCCTTCCAGTGCAGGAAGGTCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR TCA 90 bp GGTGGGGGCTTGCGCTCGCTCTCCTGTGTTTCTCGGGCTTCCCTCTaGAGCTTAATTTCACGAAAACGAGCTTCAGCTTCTTGCAGTGCG +
Preference number: 1 (lower is better)
Translates to: GGGLRSLSCVSRASL*SLISRKRASASCSA
Trigger: CGCACTGCAAGAAGCTGAAGCTCGTTTTCGTGAAATTAAGCTTCAGAGGGAAGCCCGAGAAACACAGGAGAGCGAGCGCAAGCCCCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR TCA 90 bp CCAAATGTTGATAAGAACCTAGCGAGTTCAGAAGATAGGCCCAGGTaGGAAGTAGGCCCAACCCGGCCAGGCCTCGAAAGTGCTCCGCGT +
Preference number: 1 (lower is better)
Translates to: PNVDKNLASSEDRPR*EVGPTRPGLESAPR
Trigger: ACGCGGAGCACTTTCGAGGCCTGGCCGGGTTGGGCCTACTTCTCACCTGGGCCTATCTTCTGAACTCGCTAGGTTCTTATCAACATTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR TCA 90 bp GGAAACCAGGAGATGGTCCTCTCGGAAAACTCCGCTCCTCTAGGATaGGCCCACTCCTGGCATCTGAAGTGGGACAATGCTGCCACACAT +
Preference number: 1 (lower is better)
Translates to: GNQEMVLSENSAPLG*AHSWHLKWDNAATH
Trigger: ATGTGTGGCAGCATTGTCCCACTTCAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGAGTTTTCCGAGAGGACCATCTCCTGGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR GCA 90 bp TCCTCTAGGATGAGCCCACTCCTGGCATCTGAAGTGGGACAATGCTaGCACACATGGGACTGTCCCTCTCACTGCAGAGTGCTGAGTTCA +
Preference number: 1 (lower is better)
Translates to: SSRMSPLLASEVGQC*HTWDCPSHCRVLSS
Trigger: TGAACTCAGCACTCTGCAGTGAGAGGGACAGTCCCATGTGTGGCAGCATTGTCCCACTTCAGATGCCAGGAGTGGGCTCATCCTAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR GCA 90 bp AGGAGCCTGGTCTGGCCGACTGCAGACAGCAGGCTGTGCACTGTCTaGGAAGGACTTGAGGACAATGACAAAACTGCCCACAATACACCT +
Preference number: 1 (lower is better)
Translates to: RSLVWPTADSRLCTV*EGLEDNDKTAHNTP
Trigger: AGGTGTATTGTGGGCAGTTTTGTCATTGTCCTCAAGTCCTTCGCAGACAGTGCACAGCCTGCTGTCTGCAGTCGGCCAGACCAGGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR CCA 90 bp ACAGGTGACCACATTTTAAGCTGCCCATTCGGACACATCCCCCTGTaGGCGCACACGGGTGGGTATGGGTTTAGGTGCAGATGCTGGTTT +
Preference number: 1 (lower is better)
Translates to: TGDHILSCPFGHIPL*AHTGGYGFRCRCWF
Trigger: AAACCAGCATCTGCACCTAAACCCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATGTGGTCACCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR CCA 90 bp GGCTTCCTCCATGAGCCTAGGTCTGGAAGCAACAGGAATCAGGTGTaGTGTGTGAGTCGCCTTCCACCCCACCCAGTATATGTCAGCTCA +
Preference number: 1 (lower is better)
Translates to: GFLHEPRSGSNRNQV*CVSRLPPHPVYVSS
Trigger: TGAGCTGACATATACTGGGTGGGGTGGAAGGCGACTCACACACCACACCTGATTCCTGTTGCTTCCAGACCTAGGCTCATGGAGGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR CCA 90 bp CTATGTCGGGGTGACTCTCCAGGGTCTCTGCAGAGCTACACAGTTTaGCCCTCCGCCTTCTCTTCATGGGAATGCACTCTTCTCTCACAG +
Preference number: 1 (lower is better)
Translates to: LCRGDSPGSLQSYTV*PSAFSSWECTLLSQ
Trigger: CTGTGAGAGAAGAGTGCATTCCCATGAAGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTGCAGAGACCCTGGAGAGTCACCCCGACATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR TCA 90 bp TGTAGCGTGCTCTCTGCTTCTCACTCAGCAGACTCCACTGTGACCTaGGCAGCTCTTCAATCTCCTCACCTGAAGCATCTGGGTGCTCAG +
Preference number: 1 (lower is better)
Translates to: CSVLSASHSADSTVT*AALQSPHLKHLGAQ
Trigger: CTGAGCACCCAGATGCTTCAGGTGAGGAGATTGAAGAGCTGCTCAGGTCACAGTGGAGTCTGCTGAGTGAGAAGCAGAGAGCACGCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR TCA 90 bp ACTTTCCCGTTGTTTCCCGCGTCCACCACAGCCATGCTGCGGCACTaGGCTCCGAGCAGCTTAGCTCCTGACTTTTCAAAGTTTTCTTCA +
Preference number: 1 (lower is better)
Translates to: TFPLFPASTTAMLRH*APSSLAPDFSKFSS
Trigger: TGAAGAAAACTTTGAAAAGTCAGGAGCTAAGCTGCTCGGAGCTCAGTGCCGCAGCATGGCTGTGGTGGACGCGGGAAACAACGGGAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR TCA 90 bp TCCATGAGCCTAGGTCTGGAAGCAACAGGAATCAGGTGTGGTGTGTaGGTCGCCTTCCACCCCACCCAGTATATGTCAGCTCAACTGACA +
Preference number: 1 (lower is better)
Translates to: SMSLGLEATGIRCGV*VAFHPTQYMSAQLT
Trigger: TGTCAGTTGAGCTGACATATACTGGGTGGGGTGGAAGGCGACTCACACACCACACCTGATTCCTGTTGCTTCCAGACCTAGGCTCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR TCA 90 bp GTGTGTGAGTCGCCTTCCACCCCACCCAGTATATGTCAGCTCAACTaGCACTGTGCCCTTTCAGAACCAACGCAGACTTACTTCCATGTG +
Preference number: 1 (lower is better)
Translates to: VCESPSTPPSICQLN*HCALSEPTQTYFHV
Trigger: CACATGGAAGTAAGTCTGCGTTGGTTCTGAAAGGGCACAGTGTCAGTTGAGCTGACATATACTGGGTGGGGTGGAAGGCGACTCACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR GCA 90 bp CTTGTCTATAGTGAGCATGTAGAAGTGGGTGATGTCGTTCTCGTGTaGGTGCTTGATTCTCGCCATGCACTCCTCCTCGTCGATCAGCTC +
Preference number: 1 (lower is better)
Translates to: LVYSEHVEVGDVVLV*VLDSRHALLLVDQL
Trigger: GAGCTGATCGACGAGGAGGAGTGCATGGCGAGAATCAAGCACGCACACGAGAACGACATCACCCACTTCTACATGCTCACTATAGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR GCA 90 bp ATCAGACAGATTTTTCGTTGCTGCCTGGCTCTTGAGCGAGGAGGCTaGCTCCATGGCCTTGTAAGAGCTTGTTCTGGCCGTTTTGTCAGT +
Preference number: 1 (lower is better)
Translates to: IRQIFRCCLALERGG*LHGLVRACSGRFVS
Trigger: ACTGACAAAACGGCCAGAACAAGCTCTTACAAGGCCATGGAGGCAGCCTCCTCGCTCAAGAGCCAGGCAGCAACGAAAAATCTGTCTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR TCA 90 bp GTCCTGGTGCTCCTTACAGAACGAATTGGGGCAGAGGTGGCAAAATaGAGTCGAAGGTTTGCCACACACGTCACAATGATGCCAAGGACA +
Preference number: 1 (lower is better)
Translates to: VLVLLTERIGAEVAK*SRRFATHVTMMPRT
Trigger: TGTCCTTGGCATCATTGTGACGTGTGTGGCAAACCTTCGACTTCATTTTGCCACCTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR TCA 90 bp AACATCTGCACTGGCAGTGAGCACCAATGCTGCGCTTATGAAGTCTaGGCATTACTCACACTGCAGCGTGGGCAGCTAAATGGCCTTCAT +
Preference number: 1 (lower is better)
Translates to: NICTGSEHQCCAYEV*ALLTLQRGQLNGLH
Trigger: ATGAAGGCCATTTAGCTGCCCACGCTGCAGTGTGAGTAATGCTCAGACTTCATAAGCGCAGCATTGGTGCTCACTGCCAGTGCAGATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR GCA 90 bp CCGACTCCTGTCCAAGGACTCTGCACATCACACACAGTCACCCTCTaGCTTTCACGACATGAAAGGTTGTGTCATGAAACCTCGCTTAAG +
Preference number: 1 (lower is better)
Translates to: PTPVQGLCTSHTVTL*LSRHERLCHETSLK
Trigger: CTTAAGCGAGGTTTCATGACACAACCTTTCATGTCGTGAAAGGCAGAGGGTGACTGTGTGTGATGTGCAGAGTCCTTGGACAGGAGTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR GCA 90 bp AGATGCTGCCGTGGAAGCCCGATTTCGCTTCTTCAGTGGTTTACATaGATCAGACAGATTTTTCGTTGCTGCCTGGCTCTTGAGCGAGGA +
Preference number: 1 (lower is better)
Translates to: RCCRGSPISLLQWFT*IRQIFRCCLALERG
Trigger: TCCTCGCTCAAGAGCCAGGCAGCAACGAAAAATCTGTCTGATGCATGTAAACCACTGAAGAAGCGAAATCGGGCTTCCACGGCAGCATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR CCA 90 bp ATCAAACGAGCCAAGGACTTTTCCCTCATTTGGAAATGCTTATACTaGCTTCCATGCCGGGACACAGAGGAGGACAGAAGCCCAGCTCAC +
Preference number: 1 (lower is better)
Translates to: IKRAKDFSLIWKCLY*LPCRDTEEDRSPAH
Trigger: GTGAGCTGGGCTTCTGTCCTCCTCTGTGTCCCGGCATGGAAGCCAGTATAAGCATTTCCAAATGAGGGAAAAGTCCTTGGCTCGTTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR CCA 90 bp ACCCAATGGGTGTGTGTCAGTGTGGACCTCAAACAGCAATTCTCATaGTCACCTAACTCATATCAGAATCGGGCCCAGCAGTCAACAGGC +
Preference number: 1 (lower is better)
Translates to: TQWVCVSVDLKQQFS*SPNSYQNRAQQSTG
Trigger: GCCTGTTGACTGCTGGGCCCGATTCTGATATGAGTTAGGTGACCATGAGAATTGCTGTTTGAGGTCCACACTGACACACACCCATTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420906.6
3UTR TCA 90 bp AGATTGCTCCTAGACCATCTTTGGGGCTATGTATCCTGCAACATTTaGGCAGAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAG +
Preference number: 1 (lower is better)
Translates to: RLLLDHLWGYVSCNI*AEPIEEPNQPSAIQ
Trigger: CTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTCTGCTCAAATGTTGCAGGATACATAGCCCCAAAGATGGTCTAGGAGCAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR GCA 90 bp CTCAACTGGATCAAACGAGCCAAGGACTTTTCCCTCATTTGGAAATaGTTATACTGGCTTCCATGCCGGGACACAGAGGAGGACAGAAGC +
Preference number: 1 (lower is better)
Translates to: LNWIKRAKDFSLIWK*LYWLPCRDTEEDRS
Trigger: GCTTCTGTCCTCCTCTGTGTCCCGGCATGGAAGCCAGTATAAGCATTTCCAAATGAGGGAAAAGTCCTTGGCTCGTTTGATCCAGTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR GCA 90 bp GTCGCCTTCCACCCCACCCAGTATATGTCAGCTCAACTGACACTGTaGCCTTTCAGAACCAACGCAGACTTACTTCCATGTGAACTCTTA +
Preference number: 1 (lower is better)
Translates to: VAFHPTQYMSAQLTL*PFRTNADLLPCELL
Trigger: TAAGAGTTCACATGGAAGTAAGTCTGCGTTGGTTCTGAAAGGGCACAGTGTCAGTTGAGCTGACATATACTGGGTGGGGTGGAAGGCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR GCA 90 bp CACCTCATCCCTGTGTTTTTGACAGAAGACCAAAAACTGGGATGCTaGATCTCCCTTCCTGCTTCGTGGCATGGAGACTGTGGTCTTCTT +
Preference number: 1 (lower is better)
Translates to: HLIPVFLTEDQKLGC*ISLPASWHGDCGLL
Trigger: AAGAAGACCACAGTCTCCATGCCACGAAGCAGGAAGGGAGATGCAGCATCCCAGTTTTTGGTCTTCTGTCAAAAACACAGGGATGAGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR GCA 90 bp TACCACCTCATCCCTGTGTTTTTGACAGAAGACCAAAAACTGGGATaGTGCATCTCCCTTCCTGCTTCGTGGCATGGAGACTGTGGTCTT +
Preference number: 1 (lower is better)
Translates to: YHLIPVFLTEDQKLG*CISLPASWHGDCGL
Trigger: AAGACCACAGTCTCCATGCCACGAAGCAGGAAGGGAGATGCAGCATCCCAGTTTTTGGTCTTCTGTCAAAAACACAGGGATGAGGTGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR TCA 90 bp CATCATTCTAAGTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTaGCTGGTGTGGGCTCCCACAAAAGCTGTTACCAGTGAAGGCGAA +
Preference number: 1 (lower is better)
Translates to: HHSKCSTEQLGSNPT*LVWAPTKAVTSEGE
Trigger: TTCGCCTTCACTGGTAACAGCTTTTGTGGGAGCCCACACCAGTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCACTTAGAATGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420906.6
3UTR GCA 90 bp AAAAACTACGGGAGGAAATCTTACAACACCATTGCTGCCACCACCTaGAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTTTCTGAG +
Preference number: 1 (lower is better)
Translates to: KNYGRKSYNTIAATT*RASFSLGWKRSVSE
Trigger: CTCAGAAACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATGGTGTTGTAAGATTTCCTCCCGTAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR CCA 90 bp GCAGGGTTTTGCTTTCTCCATAATATAGAGGGAGCACCTATGCGCTaGCTGACTTCTAATGCATCTATCAGTTATGGGCTAGCTGGCTGG +
Preference number: 1 (lower is better)
Translates to: AGFCFLHNIEGAPMR*LTSNASISYGLAGW
Trigger: CCAGCCAGCTAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTCTATATTATGGAGAAAGCAAAACCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR CCA 90 bp CCATCAGAGGAGCCTCTGCTGCCAAGGCAACCCTTTCAACTCAACTaGATCAAACGAGCCAAGGACTTTTCCCTCATTTGGAAATGCTTA +
Preference number: 1 (lower is better)
Translates to: PSEEPLLPRQPFQLN*IKRAKDFSLIWKCL
Trigger: TAAGCATTTCCAAATGAGGGAAAAGTCCTTGGCTCGTTTGATCCAGTTGAGTTGAAAGGGTTGCCTTGGCAGCAGAGGCTCCTCTGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR TCA 90 bp GACACCAGGCTGCTCCCCGACATTAAGACAATGAAACATGAGGGCTaGTGCTCTATAGAAGCAACTGATGCAGAGGTTGGTGTACATAAC +
Preference number: 1 (lower is better)
Translates to: DTRLLPDIKTMKHEG*CSIEATDAEVGVHN
Trigger: GTTATGTACACCAACCTCTGCATCAGTTGCTTCTATAGAGCATCAGCCCTCATGTTTCATTGTCTTAATGTCGGGGAGCAGCCTGGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR GCA 90 bp CATACAGAATATAGACCTTACAATAGTACAGTCCATGACACAGATTaGAGAGATTCCGACTTTTTCCCACCACACCCCCTCCCAGCCACC +
Preference number: 1 (lower is better)
Translates to: HTEYRPYNSTVHDTD*RDSDFFPPHPLPAT
Trigger: GGTGGCTGGGAGGGGGTGTGGTGGGAAAAAGTCGGAATCTCTGCAATCTGTGTCATGGACTGTACTATTGTAAGGTCTATATTCTGTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR CCA 90 bp TCACAGCCCTGCCATCACAGGTGCCACACACTCACATCAGGCTTCTaGCAAGAGCCTTCTCAGGAGCACTTTCTTATCATCTTAATTTTA +
Preference number: 1 (lower is better)
Translates to: SQPCHHRCHTLTSGF*QEPSQEHFLIILIL
Trigger: TAAAATTAAGATGATAAGAAAGTGCTCCTGAGAAGGCTCTTGCCAGAAGCCTGATGTGAGTGTGTGGCACCTGTGATGGCAGGGCTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR CCA 90 bp TCCTTCAAAAGCTACGAGGCTCTTCTCAAATATCCAAGCTCTTTCTaGGGCGTCACCAAAGAACTGTACGTGATACTGGCGTGCACTCTT +
Preference number: 1 (lower is better)
Translates to: SFKSYEALLKYPSSF*GVTKELYVILACTL
Trigger: AAGAGTGCACGCCAGTATCACGTACAGTTCTTTGGTGACGCCCCAGAAAGAGCTTGGATATTTGAGAAGAGCCTCGTAGCTTTTGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR TCA 90 bp CCACCTCCCCTCTCCAAGCACAGACATAGTGTGTGGAAGATGGTCTaGAGTGAGTCAAATGGGACTAAAATGGTTCCATGTATGACAAAC +
Preference number: 1 (lower is better)
Translates to: PPPLSKHRHSVWKMV*SESNGTKMVPCMTN
Trigger: GTTTGTCATACATGGAACCATTTTAGTCCCATTTGACTCACTTCAGACCATCTTCCACACACTATGTCTGTGCTTGGAGAGGGGAGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR TCA 90 bp CATCATTCTAAGTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTaGCTGGTGTGGGCTCCCACAAAAGCTCATTCTCAGTTAAGGATG +
Preference number: 1 (lower is better)
Translates to: HHSKCSTEQLGSNPT*LVWAPTKAHSQLRM
Trigger: CATCCTTAACTGAGAATGAGCTTTTGTGGGAGCCCACACCAGTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCACTTAGAATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR GCA 90 bp AATAAGTTAATATCTGCTCCCCAAAGTGCACTGCAAAGCCGATTCTaGTGTTTTGACGTAAGCATTGGTAGTCCCTTACCTGCCGGAAGG +
Preference number: 1 (lower is better)
Translates to: NKLISAPQSALQSRF*CFDVSIGSPLPAGR
Trigger: CCTTCCGGCAGGTAAGGGACTACCAATGCTTACGTCAAAACAGCAGAATCGGCTTTGCAGTGCACTTTGGGGAGCAGATATTAACTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR GCA 90 bp ATGTCATGCTGCTCTTTGGACACCATTTGGTCATTTGCAGGGTTTTaGTTTCTCCATAATATAGAGGGAGCACCTATGCGCTGGCTGACT +
Preference number: 1 (lower is better)
Translates to: MSCCSLDTIWSFAGF*FLHNIEGAPMRWLT
Trigger: AGTCAGCCAGCGCATAGGTGCTCCCTCTATATTATGGAGAAAGCAAAACCCTGCAAATGACCAAATGGTGTCCAAAGAGCAGCATGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR CCA 90 bp TTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTaGGGCGGTTTTTGTGTTTTGCTTCACATTAATGATGGAGGATTG +
Preference number: 1 (lower is better)
Translates to: LGADAGFGCQGILRD*GGFCVLLHINDGGL
Trigger: CAATCCTCCATCATTAATGTGAAGCAAAACACAAAAACCGCCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR CCA 90 bp AGCATCCTGGAATATTACATCATTCTAAGTGCAGTACAGAGCAGCTaGGTTCAAATCCAACTTGACTGGTGTGGGCTCCCACAAAAGCTG +
Preference number: 1 (lower is better)
Translates to: SILEYYIILSAVQSS*VQIQLDWCGLPQKL
Trigger: CAGCTTTTGTGGGAGCCCACACCAGTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCACTTAGAATGATGTAATATTCCAGGATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420906.6
3UTR CCA 90 bp AGCATCCTGGAATATTACATCATTCTAAGTGCAGTACAGAGCAGCTaGGTTCAAATCCAACTTGACTGGTGTGGGCTCCCACAAAAGCTC +
Preference number: 1 (lower is better)
Translates to: SILEYYIILSAVQSS*VQIQLDWCGLPQKL
Trigger: GAGCTTTTGTGGGAGCCCACACCAGTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCACTTAGAATGATGTAATATTCCAGGATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR TCA 90 bp ACAAATGTGATGAAAGGGAGGAAATACAAACATGCAAAGGGGGTGTaGCCCAATGGGTGTGTGTCAGTGTGGACCTCAAACAGCAATTCT +
Preference number: 1 (lower is better)
Translates to: TNVMKGRKYKHAKGV*PNGCVSVWTSNSNS
Trigger: AGAATTGCTGTTTGAGGTCCACACTGACACACACCCATTGGGTCACACCCCCTTTGCATGTTTGTATTTCCTCCCTTTCATCACATTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420906.6
3UTR GCA 90 bp GGCAGGCAGCAGCCCCAAATGGCTTTATTTTGCTATCATGTACTCTaGAAGTCCAGAACACAGGAGTCATATTACAATGGTAGTTCTGAC +
Preference number: 1 (lower is better)
Translates to: GRQQPQMALFCYHVL*KSRTQESYYNGSSD
Trigger: GTCAGAACTACCATTGTAATATGACTCCTGTGTTCTGGACTTGCAGAGTACATGATAGCAAAATAAAGCCATTTGGGGCTGCTGCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR CCA 90 bp GGCACACATACTCCTTTTTGGCAGTCACTCCTCGCTCAGACTTTTTaGATGAGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGT +
Preference number: 1 (lower is better)
Translates to: GTHTPFWQSLLAQTF*MRQILQFVFRLHFR
Trigger: ACGAAAGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGAGCGAGGAGTGACTGCCAAAAAGGAGTATGTGTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR TCA 90 bp CACATACTCCTTTTTGGCAGTCACTCCTCGCTCAGACTTTTTGGATaGGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGG +
Preference number: 1 (lower is better)
Translates to: HILLFGSHSSLRLFG*DRYFSLCFVCTFVW
Trigger: CCATACGAAAGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGAGCGAGGAGTGACTGCCAAAAAGGAGTATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR GCA 90 bp AATCTCAGTCTACAACATCTACGATCTATTCCATATCCAACGAGATaGATTTGGAAAGGAAAAGTGCAGGGACTGAGCGGACACAGACTC +
Preference number: 1 (lower is better)
Translates to: NLSLQHLRSIPYPTR*IWKGKVQGLSGHRL
Trigger: GAGTCTGTGTCCGCTCAGTCCCTGCACTTTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACTGAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR GCA 90 bp GCTGTTGGAGAGACACCCTGCTGTAAGAATGTCCCAAAGGAAGCATaGTCCTTGCTCATCCAGTATAGGAATCAGATGAATATAATACAA +
Preference number: 1 (lower is better)
Translates to: AVGETPCCKNVPKEA*SLLIQYRNQMNIIQ
Trigger: TTGTATTATATTCATCTGATTCCTATACTGGATGAGCAAGGAGCATGCTTCCTTTGGGACATTCTTACAGCAGGGTGTCTCTCCAACAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR TCA 90 bp ACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATATACATaGCTTAGGATCAGGAATAACAGAGAAGATCTCAGCAGGCTCCAT +
Preference number: 1 (lower is better)
Translates to: TLASCITLNQSLRYT*LRIRNNREDLSRLH
Trigger: ATGGAGCCTGCTGAGATCTTCTCTGTTATTCCTGATCCTAAGTCATGTATATCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
3UTR GCA 90 bp ATTAGTCAGAAACGTTCATTAAAGATAAAACACAGCCAAAGAATCTaGCGGGAATTAACTGTGGGCTACTCGCATGGTACTGTGAATAGC +
Preference number: 1 (lower is better)
Translates to: ISQKRSLKIKHSQRI*RELTVGYSHGTVNS
Trigger: GCTATTCACAGTACCATGCGAGTAGCCCACAGTTAATTCCCGGCAGATTCTTTGGCTGTGTTTTATCTTTAATGAACGTTTCTGACTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR GCA 90 bp AATGGCTCTCAGATCAGTCTTAGAAAAACAATTCAGGACCTCTATTaGCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGA +
Preference number: 1 (lower is better)
Translates to: NGSQISLRKTIQDLY*QYVHYLKMPPYYNG
Trigger: TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTCCTGAATTGTTTTTCTAAGACTGATCTGAGAGCCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR CCA 90 bp ATAAATGTTAACGACACACATGAGGCTCATTTCCTGATCAGGGTCTaGGACCCACATACAGAATATAGACCTTACAATAGTACAGTCCAT +
Preference number: 1 (lower is better)
Translates to: INVNDTHEAHFLIRV*DPHTEYRPYNSTVH
Trigger: ATGGACTGTACTATTGTAAGGTCTATATTCTGTATGTGGGTCCCAGACCCTGATCAGGAAATGAGCCTCATGTGTGTCGTTAACATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR GCA 90 bp AAGTTGCCTATTTGCCTTAGAAATACATTCCTTCAGGGCAGGGAATaGAGTCTCCTTGATCTATTACAGGGACTTTTCAAGATGATATTA +
Preference number: 1 (lower is better)
Translates to: KLPICLRNTFLQGRE*SLLDLLQGLFKMIL
Trigger: TAATATCATCTTGAAAAGTCCCTGTAATAGATCAAGGAGACTGCATTCCCTGCCCTGAAGGAATGTATTTCTAAGGCAAATAGGCAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR TCA 90 bp ACATTCTTCAGACAGATTTTAAGAACTATGAAACTGCATCAAGACTaGAGTATATCTGTACATGTACACAGACACTGTGTGCGTGTGTAT +
Preference number: 1 (lower is better)
Translates to: TFFRQILRTMKLHQD*SISVHVHRHCVRVY
Trigger: ATACACACGCACACAGTGTCTGTGTACATGTACAGATATACTTCAGTCTTGATGCAGTTTCATAGTTCTTAAAATCTGTCTGAAGAATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR-3UTR CCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTCCTGGCGGCTCGAGCTaGGTCCTCCGGGCCAGTTCA +
Preference number: 2 (lower is better)
Translates to: TYEARTPARQASTPRTAPPGGSS*VLRASS
Trigger: TGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAGG...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGCTCTTCCGATCCCTCTaGCCCCCTGGTAGCGGCTGC +
Preference number: 2 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWLFRSL*PPGSGC
Trigger: GCAGCCGCTACCAGGGGGTCAGAGGGATCGGAAGAG...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR GCA 90 bp CACCGCCCCTGGATCCGGCCAAGCGGCCGCCTGGCGCTATTTGCCCTCTGTGACTCCCGAAGGGCCGCTTaGCAAGGCCCAGGCAGGACA +
Preference number: 2 (lower is better)
Translates to: HRPWIRPSGRLALFALCDSRRAA*QGPGRT
Trigger: TGTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGA...GTCACAGAGGGCAAATAGCGCCAGGCGGCCGCTTGGCCGGATCCAGGGGCGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCGGTACTGGCGCTTGGTaGAGCACTGGTTCTGGCAGA +
Preference number: 2 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGGTGAW*STGSGR
Trigger: TCTGCCAGAACCAGTGCTTCACCAAGCGCCAGTACC...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR GCA 90 bp GTAGGACCGCCCGTCCGGGGTGCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTTCACACAGCACCAGCTaGCCGCCATCACCGCAGCGG +
Preference number: 2 (lower is better)
Translates to: VGPPVRGAAEGCPVLVLLSHSTS*PPSPQR
Trigger: CCGCTGCGGTGATGGCGGGCAGCTGGTGCTGTGTGA...AAGGAGCACCAGGACGGGACAGCCTTCAGCTGCACCCCGGACGGGCGGTCCTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGTTCAGGCAGTCAGGGTaGAAGGCCGCTGGGCAGGAC +
Preference number: 2 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWFRQSG*KAAGQD
Trigger: GTCCTGCCCAGCGGCCTTCCACCCTGACTGCCTGAA...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACGTCCGGGGTGCAGCTaGAGGCTGTCCCGTCCTGGT +
Preference number: 2 (lower is better)
Translates to: FQSVLREAWDPAGPHTPERPGCS*RLSRPG
Trigger: ACCAGGACGGGACAGCCTTCAGCTGCACCCCGGACG...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCGCAGCGGACGCTGCTaGGGATGGCTCAGTGGTGGG +
Preference number: 2 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPRSGRC*GWLSGG
Trigger: CCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCG...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR GCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTTCAGACGGTCATCAGTaGAGACGCAGCGGACGCTGC +
Preference number: 2 (lower is better)
Translates to: TYEARTPARQASTPRTAPSDGHQ*RRSGRC
Trigger: GCAGCGTCCGCTGCGTCTGCACTGATGACCGTCTGA...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGCCTGGCGGCTCGAGCTaGGTCCTCCGGGCCAGTTCA +
Preference number: 2 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGPGGSS*VLRASS
Trigger: TGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAGG...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTTTTGTCCAGGAACGCTaGGCTGGGCTCAGACGGTCA +
Preference number: 2 (lower is better)
Translates to: TYEARTPARQASTPRTAPFVQER*AGLRRS
Trigger: TGACCGTCTGAGCCCAGCTCAGCGTTCCTGGACAAA...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCGAGTGGCGACGGCGCTaGGAGCCAGAAAGGGGGCAA +
Preference number: 2 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPEWRRR*EPERGQ
Trigger: TTGCCCCCTTTCTGGCTCTCAGCGCCGTCGCCACTC...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAAGAGTGGCGACGGCGCTaGGAGCCAGAAAGGGGGCAA +
Preference number: 2 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEEWRRR*EPERGQ
Trigger: TTGCCCCCTTTCTGGCTCTCAGCGCCGTCGCCACTC...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR GCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGCCCCGAGGAATCCACTaGAATTGGAGGCTCCACACC +
Preference number: 2 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWPRGIH*NWRLHT
Trigger: GGTGTGGAGCCTCCAATTGCAGTGGATTCCTCGGGG...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR GCA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGTCACACAGCACCAGCTaGCCGCCATCACCGCAGCGG +
Preference number: 2 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGSHSTS*PPSPQR
Trigger: CCGCTGCGGTGATGGCGGGCAGCTGGTGCTGTGTGA...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR GCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGCGAGGCACGCACACCTaGCAGGCAGGCCTCCACCCC +
Preference number: 2 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWRGTHT*QAGLHP
Trigger: GGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCG...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp CACCGCCCCTGGATCCGGCCAAGCGGCCGCCTGGCGCTATTTGCCCTCTGTGACGTCTGCACTTTCGTATaGGGACTCCGAGGGCTCGTC +
Preference number: 2 (lower is better)
Translates to: HRPWIRPSGRLALFALCDVCTFV*GLRGLV
Trigger: GACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGAC...GTCACAGAGGGCAAATAGCGCCAGGCGGCCGCTTGGCCGGATCCAGGGGCGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR-3UTR CCA 90 bp GCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTACGTTGACGTGGGCGTaGTGTCGCTTCCCCTTCCGA +
Preference number: 2 (lower is better)
Translates to: AEDGSVVGRRSLPRRPVRTLTWA*CRFPFR
Trigger: TCGGAAGGGGAAGCGACACCACGCCCACGTCAACGT...ACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp ACTTCCCGAAGGGCCGCTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGCAGCTCACGTTGACGTaGGCGTGGTGTCGCTTCCCC +
Preference number: 2 (lower is better)
Translates to: TSRRAACQGPGRTGGRPWQLTLT*AWCRFP
Trigger: GGGGAAGCGACACCACGCCCACGTCAACGTGAGCTG...CCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGAAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGCCTGGCGGCTCGAGCTaGGTCCTCCGGGCCAGTTCA +
Preference number: 2 (lower is better)
Translates to: KHCEGDPASHGRVSPEERPGGSS*VLRASS
Trigger: TGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAGG...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCCTTGCAGTGCGTTTTTaGAGACTCTTCCGATCCCTC +
Preference number: 2 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGLAVRF*RLFRSL
Trigger: GAGGGATCGGAAGAGTCTTCAAAAACGCACTGCAAG...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCCAAATTCTCCCTTTCTaGTGTCCCTCTTGGCGACCA +
Preference number: 2 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGQILPF*CPSWRP
Trigger: TGGTCGCCAAGAGGGACATCAGAAAGGGAGAATTTG...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACAGCTCACGTTGACGTaGGCGTGGTGTCGCTTCCCC +
Preference number: 2 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEQLTLT*AWCRFP
Trigger: GGGGAAGCGACACCACGCCCACGTCAACGTGAGCTG...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp CAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCCCACGCTTGATGTGCTTGTATaGTGGGGGCTTGCGCTCGCT +
Preference number: 2 (lower is better)
Translates to: QCSGRRGTLQGHTPLNPTLDVLV*WGLALA
Trigger: AGCGAGCGCAAGCCCCCACCATACAAGCACATCAAG...CGTGGGGTTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp CACCGCCCCTGGATCCGGCCAAGCGGCCGCCTGGCGCTATTTGCCCTCTGTGACCTTGATGTGCTTGTATaGTGGGGGCTTGCGCTCGCT +
Preference number: 2 (lower is better)
Translates to: HRPWIRPSGRLALFALCDLDVLV*WGLALA
Trigger: AGCGAGCGCAAGCCCCCACCATACAAGCACATCAAG...GTCACAGAGGGCAAATAGCGCCAGGCGGCCGCTTGGCCGGATCCAGGGGCGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGCACACGAAACATGAGTaGATCCCTGAGGCACACTCG +
Preference number: 2 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWHTKHE*IPEAHS
Trigger: CGAGTGTGCCTCAGGGATTCACTCATGTTTCGTGTG...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR-3UTR TCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAAGAAGATAGGCCCAGGTaGGAAGTAGGCCCAACCCGG +
Preference number: 2 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEEDRPR*EVGPTR
Trigger: CCGGGTTGGGCCTACTTCTCACCTGGGCCTATCTTC...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR GCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTACTCCGGGCCAGTTCATaGTCGCCCTCTCCCGCAGGC +
Preference number: 2 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVLRASS*SPSPAG
Trigger: GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAG...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR GCA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGCGTGCAAAGCCCTGCTaGAGCTCTGGACAGCCCCCA +
Preference number: 2 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWRAKPC*SSGQPP
Trigger: TGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACG...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp AGCTGCCCGCCATCACCGCAGCGGAAGCACTCGTCCTCTGACTGCCTCTTCCCTACGTTGACGTGGGCGTaGTGTCGCTTCCCCTTCCGA +
Preference number: 2 (lower is better)
Translates to: SCPPSPQRKHSSSDCLFPTLTWA*CRFPFR
Trigger: TCGGAAGGGGAAGCGACACCACGCCCACGTCAACGT...AGGGAAGAGGCAGTCAGAGGACGAGTGCTTCCGCTGCGGTGATGGCGGGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp ACTTCCCGAAGGGCCGCTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGGATGTGCTTGTATGGTaGGGGCTTGCGCTCGCTCTC +
Preference number: 2 (lower is better)
Translates to: TSRRAACQGPGRTGGRPWDVLVW*GLALAL
Trigger: GAGAGCGAGCGCAAGCCCCCACCATACAAGCACATC...CCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACTTGGTCTCTGGGTACTaGCGCTTGGTGAAGCACTGG +
Preference number: 2 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYLVSGY*RLVKHW
Trigger: CCAGTGCTTCACCAAGCGCCAGTACCCAGAGACCAA...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGGAATCCACTGCAATTaGAGGCTCCACACCGGCAGA +
Preference number: 2 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYGIHCN*RLHTGR
Trigger: TCTGCCGGTGTGGAGCCTCCAATTGCAGTGGATTCC...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTCTGAGGATGGCTCAGTaGTGGGGAGGCGCTCCCTCC +
Preference number: 2 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTLRMAQ*WGGAPS
Trigger: GGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAG...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp CTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGGCCTCATGCACCATGGCAGAGACCTaGCCAGAAGTGCCGCCTTCT +
Preference number: 2 (lower is better)
Translates to: LSSPDSWAGLDPATLASCTMAET*PEVPPS
Trigger: AGAAGGCGGCACTTCTGGCCAGGTCTCTGCCATGGT...GCATGAGGCCAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR-3UTR TCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTACTCTTCCGATCCCTCTaGCCCCCTGGTAGCGGCTGC +
Preference number: 2 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVLFRSL*PPGSGC
Trigger: GCAGCCGCTACCAGGGGGTCAGAGGGATCGGAAGAG...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp CACCGCCCCTGGATCCGGCCAAGCGGCCGCCTGGCGCTATTTGCCCTCTGTGACGCAGAGGTGGCAAAATaGAGTCGAAGGTTTGCCACA +
Preference number: 2 (lower is better)
Translates to: HRPWIRPSGRLALFALCDAEVAK*SRRFAT
Trigger: TGTGGCAAACCTTCGACTTCATTTTGCCACCTCTGC...GTCACAGAGGGCAAATAGCGCCAGGCGGCCGCTTGGCCGGATCCAGGGGCGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTGCAGAGGTGGCAAAATaGAGTCGAAGGTTTGCCACA +
Preference number: 2 (lower is better)
Translates to: TYEARTPARQASTPRTAPAEVAK*SRRFAT
Trigger: TGTGGCAAACCTTCGACTTCATTTTGCCACCTCTGC...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGTCTTGGTGCTTCTaGCCGATGCCGCCCCTAAGT +
Preference number: 2 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDQSWCF*PMPPLS
Trigger: ACTTAGGGGCGGCATCGGTCAGAAGCACCAAGACTG...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp CTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGGCCTCATGCAGAAGTGCCGCCTTCTaGCTCAGCAAGAGTAAGGGG +
Preference number: 2 (lower is better)
Translates to: LSSPDSWAGLDPATLASCRSAAF*LSKSKG
Trigger: CCCCTTACTCTTGCTGAGTCAGAAGGCGGCACTTCT...GCATGAGGCCAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR-3UTR GCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTCAGCCCTGCAGTCATTaGAGAACCAGCTGCCGTCAG +
Preference number: 2 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPQPCSH*RTSCRQ
Trigger: CTGACGGCAGCTGGTTCTGCAATGACTGCAGGGCTG...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR GCA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACTCGTTCTCGTGTGCGTaGTTGATTCTCGCCATGCAC +
Preference number: 2 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYSFSCA*LILAMH
Trigger: GTGCATGGCGAGAATCAAGCACGCACACGAGAACGA...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR GCA 90 bp CGGAAGAAAGGCCGGCCTGAGGACGGACAGCTGGGTTCTCACTTCAGGTGCCTGTCAGACGGTCATCAGTaGAGACGCAGCGGACGCTGC +
Preference number: 2 (lower is better)
Translates to: RKKGRPEDGQLGSHFRCLSDGHQ*RRSGRC
Trigger: GCAGCGTCCGCTGCGTCTGCACTGATGACCGTCTGA...CAGGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR GCA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGTCAGACGGTCATCAGTaGAGACGCAGCGGACGCTGC +
Preference number: 2 (lower is better)
Translates to: KHCEGDPASHGRVSPEERSDGHQ*RRSGRC
Trigger: GCAGCGTCCGCTGCGTCTGCACTGATGACCGTCTGA...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR GCA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGTTCCGTGCAAAGCCCTaGTGCAGCTCTGGACAGCCC +
Preference number: 2 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWFRAKP*CSSGQP
Trigger: GGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAA...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAAGTCTGCACTTTCGTATaGGGACTCCGAGGGCTCGTC +
Preference number: 2 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEVCTFV*GLRGLV
Trigger: GACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGAC...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR-3UTR CCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTCGCTTGGTGAAGCACTaGTTCTGGCAGAACTCGCCC +
Preference number: 2 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPRLVKH*FWQNSP
Trigger: GGGCGAGTTCTGCCAGAACCAGTGCTTCACCAAGCG...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCCAGGAACGCTGAGCTaGGCTCAGACGGTCATCAGT +
Preference number: 2 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPPGTLS*AQTVIS
Trigger: ACTGATGACCGTCTGAGCCCAGCTCAGCGTTCCTGG...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCCAGGAACGCTGAGCTaGGCTCAGACGGTCATCAGT +
Preference number: 2 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDPGTLS*AQTVIS
Trigger: ACTGATGACCGTCTGAGCCCAGCTCAGCGTTCCTGG...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGAACCCACGGTCACAGCTaGGGGCGTGGTCAGCCCCAG +
Preference number: 2 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRTHGHS*GRGQPQ
Trigger: CTGGGGCTGACCACGCCCCCAGCTGTGACCGTGGGT...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGAAAAATGCGGACACCTaGGGCAGGACACCAGGCTGC +
Preference number: 2 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKKNADT*GRTPGC
Trigger: GCAGCCTGGTGTCCTGCCCCAGGTGTCCGCATTTTT...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp CGGAAGAAAGGCCGGCCTGAGGACGGACAGCTGGGTTCTCACTTCAGGTGCCTGGTTGGAGGCGATCACTaGGCATCCTGCTGCCAGACA +
Preference number: 2 (lower is better)
Translates to: RKKGRPEDGQLGSHFRCLVGGDH*ASCCQT
Trigger: TGTCTGGCAGCAGGATGCTCAGTGATCGCCTCCAAC...CAGGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGCGTCCGGGGTGCAGCTaGAGGCTGTCCCGTCCTGGT +
Preference number: 2 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWRPGCS*RLSRPG
Trigger: ACCAGGACGGGACAGCCTTCAGCTGCACCCCGGACG...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGCGCAGCGGACGCTGCTaGGGATGGCTCAGTGGTGGG +
Preference number: 2 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWRSGRC*GWLSGG
Trigger: CCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCG...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGGTAACGCTGAGGAGTaGGGCTGTTTGTCCAGGAAC +
Preference number: 2 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPGNAEE*GCLSRN
Trigger: GTTCCTGGACAAACAGCCTCACTCCTCAGCGTTACC...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTAGTGGGAGGGAACCTTaGCATTCGGAGAAATTCAAG +
Preference number: 2 (lower is better)
Translates to: TYEARTPARQASTPRTAPSGREP*HSEKFK
Trigger: CTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACT...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp CGGAAGAAAGGCCGGCCTGAGGACGGACAGCTGGGTTCTCACTTCAGGTGCCTGAGACCCACAGAGTGCTaGGATGGAAGCCACTCTGGG +
Preference number: 2 (lower is better)
Translates to: RKKGRPEDGQLGSHFRCLRPTEC*DGSHSG
Trigger: CCCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCT...CAGGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGCCCAGACGCAGTGACTaGTGTCAGCCATCAGAGGAG +
Preference number: 2 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWPRRSD*CQPSEE
Trigger: CTCCTCTGATGGCTGACATCAGTCACTGCGTCTGGG...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCACCACTGGCACAGTGCTaGGCAAACCCCCATCAGCCG +
Preference number: 2 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPPLAQC*ANPHQP
Trigger: CGGCTGATGGGGGTTTGCTCAGCACTGTGCCAGTGG...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAAGCTTCTTCCCAGCCCTaGAGTCATTGCAGAACCAGC +
Preference number: 2 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEASSQP*SHCRTS
Trigger: GCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAGC...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR GCA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGCCCTGCCATCACAGGTaGCACACACTCACATCAGGC +
Preference number: 2 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWPCHHR*HTLTSG
Trigger: GCCTGATGTGAGTGTGTGGCACCTGTGATGGCAGGG...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCACCACCACAGCCATGCTaGGGCACTGAGCTCCGAGCA +
Preference number: 2 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPPPQPC*GTELRA
Trigger: TGCTCGGAGCTCAGTGCCGCAGCATGGCTGTGGTGG...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp GGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTGGTGAACCTCCCTTCTaGCCTCCGGGAAAGCCCAAG +
Preference number: 2 (lower is better)
Translates to: GHVGKGTHGAPFSGCSRLGEPPF*PPGKPK
Trigger: CTTGGGCTTTCCCGGAGGCCAGAAGGGAGGTTCACC...AAGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR-3UTR CCA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGTTGGGGGAACATTTTTaGGATGGCAAACTTCTGCCG +
Preference number: 2 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAELGEHF*DGKLLP
Trigger: CGGCAGAAGTTTGCCATCCCAAAAATGTTCCCCCAA...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTACAGGTGGTAGGCCTTaGTGCAGAACTTGCGGTCAC +
Preference number: 2 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPTGGRP*CRTCGH
Trigger: GTGACCGCAAGTTCTGCACCAAGGCCTACCACCTGT...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGGAATTGGGGCAGAGGTaGCAAAATGAAGTCGAAGGT +
Preference number: 2 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAEELGQR*QNEVEG
Trigger: ACCTTCGACTTCATTTTGCCACCTCTGCCCCAATTC...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCACCTGGCGGCTCGAGCTaGGTCCTCCGGGCCAGTTCA +
Preference number: 2 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPPGGSS*VLRASS
Trigger: TGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAGG...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGTGTACGTCTGTGTCCTaGCGGCTCGAGCTGGGTCCT +
Preference number: 2 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWCTSVS*RLELGP
Trigger: AGGACCCAGCTCGAGCCGCCAGGACACAGACGTACA...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAACTGAGGATGGCTCAGTaGTGGGGAGGCGCTCCCTCC +
Preference number: 2 (lower is better)
Translates to: LRARKGATRRRVSSDPWELRMAQ*WGGAPS
Trigger: GGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAG...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCAGATGGAAGCCACTCTaGGTGGCAGGAGAGCTAGAC +
Preference number: 2 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPRWKPL*VAGELD
Trigger: GTCTAGCTCTCCTGCCACCCAGAGTGGCTTCCATCT...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACACAGAGTGCTGAGATaGAAGCCACTCTGGGTGGCA +
Preference number: 2 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEHRVLR*KPLWVA
Trigger: TGCCACCCAGAGTGGCTTCCATCTCAGCACTCTGTG...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp TGTGCTTGTATGGTGGGGGCTTGCGCTCGCTCTCCTGTGTTTCTCGGGCTTCCCGTTGGAGGCGATCACTaGGCATCCTGCTGCCAGACA +
Preference number: 2 (lower is better)
Translates to: CACMVGACARSPVFLGLPVGGDH*ASCCQT
Trigger: TGTCTGGCAGCAGGATGCTCAGTGATCGCCTCCAAC...GGGAAGCCCGAGAAACACAGGAGAGCGAGCGCAAGCCCCCACCATACAAGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp GGACAGGTGGTAGGCCTTGGTGCAGAACTTGCGGTCACACAGCACCAGCTGCCCAGTGGGCAGTGCAGATaGTGCTGTTGGAGGCGATCA +
Preference number: 2 (lower is better)
Translates to: GQVVGLGAELAVTQHQLPSGQCR*CCWRRS
Trigger: TGATCGCCTCCAACAGCATCATCTGCACTGCCCACT...GGGCAGCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTCCACACACGTCACAATaGTGCCAAGGACATTCCCAC +
Preference number: 2 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPPHTSQ*CQGHSH
Trigger: GTGGGAATGTCCTTGGCATCATTGTGACGTGTGTGG...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGTTTGTCCAGGAACGCTaGGCTGGGCTCAGACGGTCA +
Preference number: 2 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWFVQER*AGLRRS
Trigger: TGACCGTCTGAGCCCAGCTCAGCGTTCCTGGACAAA...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTAGACCCACAGAGTGCTaGGATGGAAGCCACTCTGGG +
Preference number: 2 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTRPTEC*DGSHSG
Trigger: CCCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCT...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp CGGAAGAAAGGCCGGCCTGAGGACGGACAGCTGGGTTCTCACTTCAGGTGCCTGGGCAGAGGGCACATGTaGTCAGCAGAGACTGCATCT +
Preference number: 2 (lower is better)
Translates to: RKKGRPEDGQLGSHFRCLGRGHM*SAETAS
Trigger: AGATGCAGTCTCTGCTGATCACATGTGCCCTCTGCC...CAGGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCATCCGCTCCTCTAGGATaGGCCCACTCCTGGCATCTG +
Preference number: 2 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPSAPLG*AHSWHL
Trigger: CAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGA...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCGGGATGGCAAACTTCTaGCGGCCACCATCTGTAGTT +
Preference number: 2 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPGMANF*RPPSVV
Trigger: AACTACAGATGGTGGCCGGCAGAAGTTTGCCATCCC...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR GCA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATCCCGCGGGACACACCTaGGGGTGGCACTCAAACATC +
Preference number: 2 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYPAGHT*GWHSNI
Trigger: GATGTTTGAGTGCCACCCGCAGGTGTGTCCCGCGGG...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR GCA 90 bp AATGATCACAATGGCAGTTTCGAGGAATCCAGGGTCAGTCCTCACACGGGCCTCCTCCGGGCCAGTTCATaGTCGCCCTCTCCCGCAGGC +
Preference number: 2 (lower is better)
Translates to: NDHNGSFEESRVSPHTGLLRASS*SPSPAG
Trigger: GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAG...GAGGCCCGTGTGAGGACTGACCCTGGATTCCTCGAAACTGCCATTGTGATCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR GCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTGCGGTCTCACGCCCTaGAAAGTCACTCCTTTCGCC +
Preference number: 2 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTCGLTP*KVTPFA
Trigger: GGCGAAAGGAGTGACTTTGCAGGGCGTGAGACCGCA...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR GCA 90 bp GCTATCAGACAGGAGCCTCTCCAGCGAGGGGAATCCGTGGCTTTACAGCCCTCCCCCTGCCATCACAGGTaGCACACACTCACATCAGGC +
Preference number: 2 (lower is better)
Translates to: AIRQEPLQRGESVALQPSPCHHR*HTLTSG
Trigger: GCCTGATGTGAGTGTGTGGCACCTGTGATGGCAGGG...GGAGGGCTGTAAAGCCACGGATTCCCCTCGCTGGAGAGGCTCCTGTCTGATAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATCCAAGGCAGGCGAGGTaGAAAGCTCCGCAGCAGGGT +
Preference number: 2 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYPRQAR*KAPQQG
Trigger: ACCCTGCTGCGGAGCTTTCCACCTCGCCTGCCTTGG...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR-3UTR CCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGAGGATGGCTCAGTGGTaGGGAGGCGCTCCCTCCCGA +
Preference number: 2 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWRMAQW*GGAPSR
Trigger: TCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCT...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTCCAGGAACGCTGAGCTaGGCTCAGACGGTCATCAGT +
Preference number: 2 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTPGTLS*AQTVIS
Trigger: ACTGATGACCGTCTGAGCCCAGCTCAGCGTTCCTGG...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGTCACTCCTTTCGCCATaGAGCTCAGGGCCGCATCAG +
Preference number: 2 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWSLLSP*SSGPHQ
Trigger: CTGATGCGGCCCTGAGCTCCATGGCGAAAGGAGTGA...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp CTCCGCTCCTCTAGGATGAGCCCACTCCTGGCATCTGAAGTGGGACAATGCTGCTGGACACACACACCATaGGCAAGCAAGGCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: LRSSRMSPLLASEVGQCCWTHTP*ASKARA
Trigger: GGCCCTGGCCTTGCTTGCCCATGGTGTGTGTGTCCA...GCAGCATTGTCCCACTTCAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp GGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAATGGGGAGGAGCCTGGTCTaGCCGACTGCAGACAGCAGG +
Preference number: 2 (lower is better)
Translates to: GQVAAAPNSRPALVKGKMGRSLV*PTADSR
Trigger: CCTGCTGTCTGCAGTCGGCCAGACCAGGCTCCTCCC...CATTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGCCACCAGGGCAAACTTaGTGTTGTAGCGTGCTCTCT +
Preference number: 2 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKPPGQT*CCSVLS
Trigger: AGAGAGCACGCTACAACACCAAGTTTGCCCTGGTGG...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR TCA 90 bp CGGGGTGCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGAGTGGGCAGTGCAGATaGTGCTGTTGGAGGCGATCA +
Preference number: 2 (lower is better)
Translates to: RGAAEGCPVLVLLTERIGSGQCR*CCWRRS
Trigger: TGATCGCCTCCAACAGCATCATCTGCACTGCCCACT...CCCAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTTCAGCTGCACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGCCACACACGTCACAATaGTGCCAAGGACATTCCCAC +
Preference number: 2 (lower is better)
Translates to: KHCEGDPASHGRVSPEERPHTSQ*CQGHSH
Trigger: GTGGGAATGTCCTTGGCATCATTGTGACGTGTGTGG...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGATCCAACCAAAAAGATaGGGCCTGTCGGGCTGTTGG +
Preference number: 2 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWIQPKR*GLSGCW
Trigger: CCAACAGCCCGACAGGCCTCATCTTTTTGGTTGGAT...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp AATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGCTCCGGGCCAGTTCATaGTCGCCCTCTCCCGCAGGC +
Preference number: 2 (lower is better)
Translates to: NKVVLEDGHCTRRGLDVKLRASS*SPSPAG
Trigger: GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAG...CTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR GCA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGCTCCGGGCCAGTTCATaGTCGCCCTCTCCCGCAGGC +
Preference number: 2 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSELRASS*SPSPAG
Trigger: GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAG...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR GCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCGGGCCACCCCTTCCGTaGAAAGCCCTGCTGCAGCTC +
Preference number: 2 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSGPPLP*KALLQL
Trigger: GAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCC...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp AACAGGGCCACCCCTTCCGTGCAAAGCCCTGCTGCAGCTCTGGACAGCCCCCAACACAGCCAAAGAATCTaGCGGGAATTAACTGTGGGC +
Preference number: 2 (lower is better)
Translates to: NRATPSVQSPAAALDSPQHSQRI*RELTVG
Trigger: GCCCACAGTTAATTCCCGGCAGATTCTTTGGCTGTG...TTGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCAGAGTTCACTTGCCCCTaGCCACCTTCCCAATGTCCC +
Preference number: 2 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPEFTCP*PPSQCP
Trigger: GGGACATTGGGAAGGTGGGCAGGGGCAAGTGAACTC...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGCACACAGTCACCCTCTaGCTTTCACGACATGAAAGG +
Preference number: 2 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKHTVTL*LSRHER
Trigger: CCTTTCATGTCGTGAAAGGCAGAGGGTGACTGTGTG...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGCCTGTCCAAGGACTCTaGACATCACACACAGTCACC +
Preference number: 2 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWPVQGL*TSHTVT
Trigger: GGTGACTGTGTGTGATGTGCAGAGTCCTTGGACAGG...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGTCCTTTCCTGTGGTGTaGTCAGCTCTTAACGTCTCC +
Preference number: 2 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKSFPVV*SALNVS
Trigger: GGAGACGTTAAGAGCTGAGCACACCACAGGAAAGGA...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCACCCTGCCATCACAGGTaGCACACACTCACATCAGGC +
Preference number: 2 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPPCHHR*HTLTSG
Trigger: GCCTGATGTGAGTGTGTGGCACCTGTGATGGCAGGG...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGCTGAGGCAGAAGAATTaGTGGAACCAAGGAGGCGGA +
Preference number: 2 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWLRQKN*WNQGGG
Trigger: TCCGCCTCCTTGGTTCCAGCAATTCTTCTGCCTCAG...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGTTCTCCCAAAGACTCTaGAGCAATGCCAGCCTCCTT +
Preference number: 2 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKFSQRL*SNASLL
Trigger: AAGGAGGCTGGCATTGCTGCAGAGTCTTTGGGAGAA...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR GCA 90 bp AACAGGGCCACCCCTTCCGTGCAAAGCCCTGCTGCAGCTCTGGACAGCCCCCAAGACCAAAAACTGGGATaGTGCATCTCCCTTCCTGCT +
Preference number: 2 (lower is better)
Translates to: NRATPSVQSPAAALDSPQDQKLG*CISLPA
Trigger: AGCAGGAAGGGAGATGCAGCATCCCAGTTTTTGGTC...TTGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR CCA 90 bp AACAAATTCTCCCTTTCTGATGTCCCTCTTGGCGACCAGGCCCCACCCTTTGCCCCAAGGCAGGCGAGGTaGAAAGCTCCGCAGCAGGGT +
Preference number: 2 (lower is better)
Translates to: NKFSLSDVPLGDQAPPFAPRQAR*KAPQQG
Trigger: ACCCTGCTGCGGAGCTTTCCACCTCGCCTGCCTTGG...GGCAAAGGGTGGGGCCTGGTCGCCAAGAGGGACATCAGAAAGGGAGAATTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR-3UTR CCA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGTGAAGCACTGGTTCTaGCAGAACTCGCCCGCGGGA +
Preference number: 2 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYVKHWF*QNSPAG
Trigger: TCCCGCGGGCGAGTTCTGCCAGAACCAGTGCTTCAC...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCCTGAGGATGGCTCAGTaGTGGGGAGGCGCTCCCTCC +
Preference number: 2 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLLRMAQ*WGGAPS
Trigger: GGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAG...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGAGATGGAAGCCACTCTaGGTGGCAGGAGAGCTAGAC +
Preference number: 2 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWRWKPL*VAGELD
Trigger: GTCTAGCTCTCCTGCCACCCAGAGTGGCTTCCATCT...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp CGGAAGAAAGGCCGGCCTGAGGACGGACAGCTGGGTTCTCACTTCAGGTGCCTGAGTGGGTGTCATACCTaGCCTAGACCAGTGCCCATA +
Preference number: 2 (lower is better)
Translates to: RKKGRPEDGQLGSHFRCLSGCHT*PRPVPI
Trigger: TATGGGCACTGGTCTAGGCCAGGTATGACACCCACT...CAGGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGAGGGCAAAGGCACACATaGTGCCCCCTTCTCAGGGTG +
Preference number: 2 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRGQRHT*CPLLRV
Trigger: CACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCC...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp AACAGGGCCACCCCTTCCGTGCAAAGCCCTGCTGCAGCTCTGGACAGCCCCCAACTTGGTCCGGGGCCTTaGATCAAAAGGGTTAAATGG +
Preference number: 2 (lower is better)
Translates to: NRATPSVQSPAAALDSPQLGPGP*IKRVKW
Trigger: CCATTTAACCCTTTTGATCCAAGGCCCCGGACCAAG...TTGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp CCGCCTTCTGACTCAGCAAGAGTAAGGGGCCTGTCCAACCCTTGCCTCACTACCACTGAGTGTGTACGATaGTACGCCACCTGCAGCAGC +
Preference number: 2 (lower is better)
Translates to: PPSDSARVRGLSNPCLTTTECVR*YATCSS
Trigger: GCTGCTGCAGGTGGCGTATCATCGTACACACTCAGT...GGTAGTGAGGCAAGGGTTGGACAGGCCCCTTACTCTTGCTGAGTCAGAAGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420906.6
3UTR-3UTR TCA 90 bp CGGGGTGCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGCACACGAAACATGAGTaGATCCCTGAGGCACACTCG +
Preference number: 2 (lower is better)
Translates to: RGAAEGCPVLVLLTERIGHTKHE*IPEAHS
Trigger: CGAGTGTGCCTCAGGGATTCACTCATGTTTCGTGTG...CCCAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTTCAGCTGCACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR-3UTR TCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGGAAGCACTCGTCCTCTaGCTGCCTCTTCCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWEALVL*LPLPFP
Trigger: GGGGAAGGGAAGAGGCAGTCAGAGGACGAGTGCTTC...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTCCACACACGTCACAATaGTGCCAAGGACATTCCCAC +
Preference number: 2 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTPHTSQ*CQGHSH
Trigger: GTGGGAATGTCCTTGGCATCATTGTGACGTGTGTGG...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCAGTGGGAGGGAACCTTaGCATTCGGAGAAATTCAAG +
Preference number: 2 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPSGREP*HSEKFK
Trigger: CTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACT...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTAGTGGGAGGGAACCTTaGCATTCGGAGAAATTCAAG +
Preference number: 2 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPSGREP*HSEKFK
Trigger: CTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACT...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp AACAGGGCCACCCCTTCCGTGCAAAGCCCTGCTGCAGCTCTGGACAGCCCCCAAACTCGCATGGTACTGTaGATAGCACACCTTCTGCTT +
Preference number: 2 (lower is better)
Translates to: NRATPSVQSPAAALDSPQTRMVL*IAHLLL
Trigger: AAGCAGAAGGTGTGCTATTCACAGTACCATGCGAGT...TTGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCTGTCCCACTGTGTCCTaGGCAGCGGCCATCCCACAG +
Preference number: 2 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSCPTVS*AAAIPQ
Trigger: CTGTGGGATGGCCGCTGCTCAGGACACAGTGGGACA...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCGCCATGCTGCGGCACTaGGCTCCGAGCAGCTTAGCT +
Preference number: 2 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSAMLRH*APSSLA
Trigger: AGCTAAGCTGCTCGGAGCTCAGTGCCGCAGCATGGC...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp AGCAGCCCCAGTCCCACCATCCGTGAACAGGTCTCGACCACCACTGAGTTGGTTCATCTGCACTGGCAGTaGGCACCAATGCTGCGCTTA +
Preference number: 2 (lower is better)
Translates to: SSPSPTIREQVSTTTELVHLHWQ*APMLRL
Trigger: TAAGCGCAGCATTGGTGCTCACTGCCAGTGCAGATG...AACCAACTCAGTGGTGGTCGAGACCTGTTCACGGATGGTGGGACTGGGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR-3UTR TCA 90 bp GGTTTGAGTCCCTGCAGAAAATCCCACTCGGAGGAGTGGTCGCTGAGGATTCAGATCAGGTGTGGTGTGTaGGTCGCCTTCCACCCCACC +
Preference number: 2 (lower is better)
Translates to: GLSPCRKSHSEEWSLRIQIRCGV*VAFHPT
Trigger: GGTGGGGTGGAAGGCGACTCACACACCACACCTGAT...CTGAATCCTCAGCGACCACTCCTCCGAGTGGGATTTTCTGCAGGGACTCAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR-3UTR TCA 90 bp GCTATCAGACAGGAGCCTCTCCAGCGAGGGGAATCCGTGGCTTTACAGCCCTCCCAGCAGACTCCACTGTaGCCTGAGCAGCTCTTCAAT +
Preference number: 2 (lower is better)
Translates to: AIRQEPLQRGESVALQPSQQTPL*PEQLFN
Trigger: ATTGAAGAGCTGCTCAGGTCACAGTGGAGTCTGCTG...GGAGGGCTGTAAAGCCACGGATTCCCCTCGCTGGAGAGGCTCCTGTCTGATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR TCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCTTGCTGCCTGGCTCTTaGGCGAGGAGGCTGCCTCCA +
Preference number: 2 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSLLPGS*ARRLPP
Trigger: TGGAGGCAGCCTCCTCGCTCAAGAGCCAGGCAGCAA...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR TCA 90 bp TCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGGCAGAGGTGGCAAAATGAAGGGCAGGAGGACAGCTTaGGCCCGAGAGGACAGCTTG +
Preference number: 2 (lower is better)
Translates to: SRPGAPYRTNWGRGGKMKGRRTA*AREDSL
Trigger: CAAGCTGTCCTCTCGGGCTCAAGCTGTCCTCCTGCC...CTTCATTTTGCCACCTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGACGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677559.1
3UTR-3UTR GCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGGGGATGGCAAACTTCTaGCGGCCACCATCTGTAGTT +
Preference number: 2 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWGMANF*RPPSVV
Trigger: AACTACAGATGGTGGCCGGCAGAAGTTTGCCATCCC...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR GCA 90 bp GTAGGACCGCCCGTCCGGGGTGCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTTTCAGCTTCTTGCAGTaGGTTTTTGAAGACTCTTCC +
Preference number: 2 (lower is better)
Translates to: VGPPVRGAAEGCPVLVLLFSFLQ*VFEDSS
Trigger: GGAAGAGTCTTCAAAAACGCACTGCAAGAAGCTGAA...AAGGAGCACCAGGACGGGACAGCCTTCAGCTGCACCCCGGACGGGCGGTCCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR GCA 90 bp GGACAGGTGGTAGGCCTTGGTGCAGAACTTGCGGTCACACAGCACCAGCTGCCCGATGTCGTTCTCGTGTaGGTGCTTGATTCTCGCCAT +
Preference number: 2 (lower is better)
Translates to: GQVVGLGAELAVTQHQLPDVVLV*VLDSRH
Trigger: ATGGCGAGAATCAAGCACGCACACGAGAACGACATC...GGGCAGCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR GCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTACTTCCCTTCCCCTTTTaGTCTGCGCCGCCTCGTTTT +
Preference number: 2 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVLPFPF*SAPPRF
Trigger: AAAACGAGGCGGCGCAGAGCAAAAGGGGAAGGGAAG...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR GCA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCATCAGACGGTCATCAGTaGAGACGCAGCGGACGCTGC +
Preference number: 2 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPSDGHQ*RRSGRC
Trigger: GCAGCGTCCGCTGCGTCTGCACTGATGACCGTCTGA...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR GCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCCGTGCAAAGCCCTGCTaGAGCTCTGGACAGCCCCCA +
Preference number: 2 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSRAKPC*SSGQPP
Trigger: TGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACG...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGTTCCGTGCAAAGCCCTaGTGCAGCTCTGGACAGCCC +
Preference number: 2 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKFRAKP*CSSGQP
Trigger: GGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAA...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp GCTATCAGACAGGAGCCTCTCCAGCGAGGGGAATCCGTGGCTTTACAGCCCTCCCTTACCATGCAAAAATaGGGACACCTGGGGCAGGAC +
Preference number: 2 (lower is better)
Translates to: AIRQEPLQRGESVALQPSLTMQK*GHLGQD
Trigger: GTCCTGCCCCAGGTGTCCGCATTTTTGCATGGTAAG...GGAGGGCTGTAAAGCCACGGATTCCCCTCGCTGGAGAGGCTCCTGTCTGATAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp GCTATCAGACAGGAGCCTCTCCAGCGAGGGGAATCCGTGGCTTTACAGCCCTCCTTATACTGGCTTCCATaGCGGGACACAGAGGAGGAC +
Preference number: 2 (lower is better)
Translates to: AIRQEPLQRGESVALQPSLYWLP*RDTEED
Trigger: GTCCTCCTCTGTGTCCCGGCATGGAAGCCAGTATAA...GGAGGGCTGTAAAGCCACGGATTCCCCTCGCTGGAGAGGCTCCTGTCTGATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGGTTGGAGAGACACCCTaGTGTAAGAATGTCCCAAAG +
Preference number: 2 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKVGETP*CKNVPK
Trigger: CTTTGGGACATTCTTACAGCAGGGTGTCTCTCCAAC...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCCCTGGTCTGGCCGACTaGAGACAGCAGGCTGTGCAC +
Preference number: 2 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSPGLAD*RQQAVH
Trigger: GTGCACAGCCTGCTGTCTGCAGTCGGCCAGACCAGG...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCACTTGAGCGAGGAGGCTaGCTCCATGGCCTTGTAAGA +
Preference number: 2 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPLERGG*LHGLVR
Trigger: TCTTACAAGGCCATGGAGGCAGCCTCCTCGCTCAAG...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR CCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTTCCGAGCAGTGAAGTaGGCAGTGCAGATGATGCTG +
Preference number: 2 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTFRAVK*AVQMML
Trigger: CAGCATCATCTGCACTGCCCACTTCACTGCTCGGAA...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGTATGGGCTAGCTGGCTaGCCACCCATGCAAAATTCA +
Preference number: 2 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWYGLAG*PPMQNS
Trigger: TGAATTTTGCATGGGTGGCCAGCCAGCTAGCCCATA...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR CAA 90 bp GAGCACCACTGCACACCACAGTCGTCTTCTAACCTGCACAGGCTTTaGTGTAGCCGTAGCCACATAGCCCCAAGCAGGTGGCAGCAAGGA +
Preference number: 2 (lower is better)
Translates to: EHHCTPQSSSNLHRL*CSRSHIAPSRWQQG
Trigger: TCCTTGCTGCCACCTGCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGACTGTGGTGTGCAGTGGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTACTCTTCCGATCCCTCTaGCCCCCTGGTAGCGGCTGC +
Preference number: 2 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLLFRSL*PPGSGC
Trigger: GCAGCCGCTACCAGGGGGTCAGAGGGATCGGAAGAG...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp CTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGTGCAGAACTTGCGGTCAAGGCTTATTCACCTTaGTGTGCTTGTATGGTGGGG +
Preference number: 2 (lower is better)
Translates to: LAKAQAGQVVGLGAELAVKAYSP*CACMVG
Trigger: CCCCACCATACAAGCACATCAAGGTGAATAAGCCTT...GACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGATCTCGTGTGCGTGCTTaGTTCTCGCCATGCACTCCT +
Preference number: 2 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRSRVRA*FSPCTP
Trigger: AGGAGTGCATGGCGAGAATCAAGCACGCACACGAGA...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACACGCAGCGGACGCTGCTaGGGATGGCTCAGTGGTGGG +
Preference number: 2 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTRSGRC*GWLSGG
Trigger: CCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCG...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGTTTGTCCAGGAACGCTaGGCTGGGCTCAGACGGTCA +
Preference number: 2 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWFVQER*AGLRRS
Trigger: TGACCGTCTGAGCCCAGCTCAGCGTTCCTGGACAAA...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGAGTGGCGACGGCGCTaGGAGCCAGAAAGGGGGCAA +
Preference number: 2 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLEWRRR*EPERGQ
Trigger: TTGCCCCCTTTCTGGCTCTCAGCGCCGTCGCCACTC...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGAACAGCCACCAGCCAGTaGAACTTCCAGTCAGTGCTC +
Preference number: 2 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRTATSQ*NFQSVL
Trigger: GAGCACTGACTGGAAGTTTCACTGGCTGGTGGCTGT...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGCACCTATGCGCTGGCTaGCTTCTAATGCATCTATCA +
Preference number: 2 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWHLCAG*LLMHLS
Trigger: TGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTG...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp GCCCCGCCCAGGTTGCCTAGGTCCCTGACCTTCCTGCACTGGAAGGCCTACACTGACCCATGTCTACAATaGGAAAAACAGCATCACGGA +
Preference number: 2 (lower is better)
Translates to: APPRLPRSLTFLHWKAYTDPCLQ*EKQHHG
Trigger: TCCGTGATGCTGTTTTTCTCATTGTAGACATGGGTC...AGTGTAGGCCTTCCAGTGCAGGAAGGTCAGGGACCTAGGCAACCTGGGCGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR-3UTR TCA 90 bp AGGTCTCGACCACCACTGAGTTGGTTTGAGTCCCTGCAGAAAATCCCACTCGGAGGTTGCCTAGGTCCCTaGCCTTCCTGCACTGGAAGG +
Preference number: 2 (lower is better)
Translates to: RSRPPLSWFESLQKIPLGGCLGP*PSCTGR
Trigger: CCTTCCAGTGCAGGAAGGTCAGGGACCTAGGCAACC...TCCGAGTGGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCGAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR-3UTR TCA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGTTCCCTATGTCGGGGTaGCTCTCCAGGGTCTCTGCA +
Preference number: 2 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKFPMSG*LSRVSA
Trigger: TGCAGAGACCCTGGAGAGTCACCCCGACATAGGGAA...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR GCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGAGCTTCTTCCCAGCCCTaGAGTCATTGCAGAACCAGC +
Preference number: 2 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRASSQP*SHCRTS
Trigger: GCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAGC...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR GCA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGTTATTCACCTTGATGTaGTTGTATGGTGGGGGCTTG +
Preference number: 2 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGLFTLM*LYGGGL
Trigger: CAAGCCCCCACCATACAAGCACATCAAGGTGAATAA...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR GCA 90 bp AATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGCCCGCGGGACACACCTaGGGGTGGCACTCAAACATC +
Preference number: 2 (lower is better)
Translates to: NKVVLEDGHCTRRGLDVKPAGHT*GWHSNI
Trigger: GATGTTTGAGTGCCACCCGCAGGTGTGTCCCGCGGG...CTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR GCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACACTCCGGGCCAGTTCATaGTCGCCCTCTCCCGCAGGC +
Preference number: 2 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTLRASS*SPSPAG
Trigger: GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAG...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR GCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGAGTTGTCACTTCCTGTaGTCTAAGCAGACTGCGGTC +
Preference number: 2 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWSCHFL*SKQTAV
Trigger: GACCGCAGTCTGCTTAGAGCACAGGAAGTGACAACT...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR GCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCGCACCTCTCAGTAGGTaGCCTGGCAGAGGGCACATG +
Preference number: 2 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLAPLSR*PGRGHM
Trigger: CATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGC...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR GCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGTCTTAACCGGCGAGTaGCCCTCAGAGGCCACGGCC +
Preference number: 2 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLVLTGE*PSEATA
Trigger: GGCCGTGGCCTCTGAGGGGCACTCGCCGGTTAAGAC...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR GCA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGGCCTTTTCCTTACCATaGAAAAATGCGGACACCTGG +
Preference number: 2 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWAFSLP*KNADTW
Trigger: CCAGGTGTCCGCATTTTTGCATGGTAAGGAAAAGGC...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGGAGTTCACTTGCCCCTaGCCACCTTCCCAATGTCCC +
Preference number: 2 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKEFTCP*PPSQCP
Trigger: GGGACATTGGGAAGGTGGGCAGGGGCAAGTGAACTC...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp GCTATCAGACAGGAGCCTCTCCAGCGAGGGGAATCCGTGGCTTTACAGCCCTCCGACTGTCCCTCTCACTaGAGAGTGCTGAGTTCACTT +
Preference number: 2 (lower is better)
Translates to: AIRQEPLQRGESVALQPSDCPSH*RVLSSL
Trigger: AAGTGAACTCAGCACTCTGCAGTGAGAGGGACAGTC...GGAGGGCTGTAAAGCCACGGATTCCCCTCGCTGGAGAGGCTCCTGTCTGATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCTCGGGGAGGATCCAATaGTCTCGGCTCGGCAACCAC +
Preference number: 2 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSSGRIQ*SRLGNH
Trigger: GTGGTTGCCGAGCCGAGAGCATTGGATCCTCCCCGA...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp AACTGTAAAGCAGCCCCAGTCCCACCATCCGTGAACAGGTCTCGACCACCACTGGGCCTGTCCAACCCTTaGCTCACTACCCTGTTCCAA +
Preference number: 2 (lower is better)
Translates to: NCKAAPVPPSVNRSRPPLGLSNP*LTTLFQ
Trigger: TTGGAACAGGGTAGTGAGGCAAGGGTTGGACAGGCC...CAGTGGTGGTCGAGACCTGTTCACGGATGGTGGGACTGGGGCTGCTTTACAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR-3UTR CCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCGGTGAACCTCCCTTCTaGCCTCCGGGAAAGCCCAAG +
Preference number: 2 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLGEPPF*PPGKPK
Trigger: CTTGGGCTTTCCCGGAGGCCAGAAGGGAGGTTCACC...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR-3UTR CCA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAACGTTGACGTGGGCGTaGTGTCGCTTCCCCTTCCGA +
Preference number: 2 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRTLTWA*CRFPFR
Trigger: TCGGAAGGGGAAGCGACACCACGCCCACGTCAACGT...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp AATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGTTCAGGCAGTCAGGGTaGAAGGCCGCTGGGCAGGAC +
Preference number: 2 (lower is better)
Translates to: NKVVLEDGHCTRRGLDVKFRQSG*KAAGQD
Trigger: GTCCTGCCCAGCGGCCTTCCACCCTGACTGCCTGAA...CTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACCAGGAACGCTGAGCTaGGCTCAGACGGTCATCAGT +
Preference number: 2 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLPGTLS*AQTVIS
Trigger: ACTGATGACCGTCTGAGCCCAGCTCAGCGTTCCTGG...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCACCTCAAGTTTTACACTaGAGAGCCACCTCCCCTCTC +
Preference number: 2 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPPQVLH*RATSPL
Trigger: GAGAGGGGAGGTGGCTCTCCAGTGTAAAACTTGAGG...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp CACAGGAGCAGCAAGCTTGCTCCTGACAGCATGGCTCTCACACAGCATCCTCCCCCTCAAGTTTTACACTaGAGAGCCACCTCCCCTCTC +
Preference number: 2 (lower is better)
Translates to: HRSSKLAPDSMALTQHPPPQVLH*RATSPL
Trigger: GAGAGGGGAGGTGGCTCTCCAGTGTAAAACTTGAGG...GGGAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp CTCCGCTCCTCTAGGATGAGCCCACTCCTGGCATCTGAAGTGGGACAATGCTGCTTGCTCCTGACAGCATaGCTCTCACACAGCATCCTC +
Preference number: 2 (lower is better)
Translates to: LRSSRMSPLLASEVGQCCLLLTA*LSHSIL
Trigger: GAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAA...GCAGCATTGTCCCACTTCAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGTTCCTGATCAGGGTCTaGGACCCACATACAGAATAT +
Preference number: 2 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKFLIRV*DPHTEY
Trigger: ATATTCTGTATGTGGGTCCCAGACCCTGATCAGGAA...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp CCGCCTTCTGACTCAGCAAGAGTAAGGGGCCTGTCCAACCCTTGCCTCACTACCACTCACACTGCAGCGTaGGCAGCTAAATGGCCTTCA +
Preference number: 2 (lower is better)
Translates to: PPSDSARVRGLSNPCLTTTHTAA*AAKWPS
Trigger: TGAAGGCCATTTAGCTGCCCACGCTGCAGTGTGAGT...GGTAGTGAGGCAAGGGTTGGACAGGCCCCTTACTCTTGCTGAGTCAGAAGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR-3UTR CCA 90 bp TTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCCTGAAGATGCTGCCGTaGAAGCCCGATTTCGCTTCT +
Preference number: 2 (lower is better)
Translates to: FVFRLHFRMGTPRARLPGLKMLP*KPDFAS
Trigger: AGAAGCGAAATCGGGCTTCCACGGCAGCATCTTCAG...GCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511904.1
3UTR CAA 90 bp GTGCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTACAGAACGAATaGGGGCAGAGGTGGCAAAATGAAGTCGAAGGTTTGCCACACACG +
Preference number: 2 (lower is better)
Translates to: VQLKAVPSWCSLQNE*GQRWQNEVEGLPHT
Trigger: CGTGTGTGGCAAACCTTCGACTTCATTTTGCCACCTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTTCAGCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp GGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAATGACTGAGTGTGTACGATaGTACGCCACCTGCAGCAGC +
Preference number: 2 (lower is better)
Translates to: GQVAAAPNSRPALVKGKMTECVR*YATCSS
Trigger: GCTGCTGCAGGTGGCGTATCATCGTACACACTCAGT...CATTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGTCTCGGGCTTCCCTCTaGAGCTTAATTTCACGAAAA +
Preference number: 2 (lower is better)
Translates to: KHCEGDPASHGRVSPEERSRASL*SLISRK
Trigger: TTTTCGTGAAATTAAGCTTCAGAGGGAAGCCCGAGA...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGCATGTAGAAGTGGGTaGTGTCGTTCTCGTGTGCGT +
Preference number: 2 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYACRSG*CRSRVR
Trigger: ACGCACACGAGAACGACATCACCCACTTCTACATGC...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGATTTGTCCAGGAACGCTaGGCTGGGCTCAGACGGTCA +
Preference number: 2 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRFVQER*AGLRRS
Trigger: TGACCGTCTGAGCCCAGCTCAGCGTTCCTGGACAAA...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGGGTAACGCTGAGGAGTaGGGCTGTTTGTCCAGGAAC +
Preference number: 2 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWGNAEE*GCLSRN
Trigger: GTTCCTGGACAAACAGCCTCACTCCTCAGCGTTACC...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAAGGGCCACACACCCCTaGACCCCACGCTTACAGGTC +
Preference number: 2 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLRATHP*TPRLQV
Trigger: GACCTGTAAGCGTGGGGTTCAGGGGTGTGTGGCCCT...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp AACAGGGCCACCCCTTCCGTGCAAAGCCCTGCTGCAGCTCTGGACAGCCCCCAAATGAAACATGAGGGCTaGTGCTCTATAGAAGCAACT +
Preference number: 2 (lower is better)
Translates to: NRATPSVQSPAAALDSPQMKHEG*CSIEAT
Trigger: AGTTGCTTCTATAGAGCATCAGCCCTCATGTTTCAT...TTGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp CTCCGCTCCTCTAGGATGAGCCCACTCCTGGCATCTGAAGTGGGACAATGCTGCCCCTGGTTATTCAGCTaGTGCCAATGTCATGCTGCT +
Preference number: 2 (lower is better)
Translates to: LRSSRMSPLLASEVGQCCPWLFS*CQCHAA
Trigger: AGCAGCATGACATTGGCATCAGCTGAATAACCAGGG...GCAGCATTGTCCCACTTCAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCACCCTGGTTATTCAGCTaGTGCCAATGTCATGCTGCT +
Preference number: 2 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPPWLFS*CQCHAA
Trigger: AGCAGCATGACATTGGCATCAGCTGAATAACCAGGG...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp CTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGGCCTCATGCAGCCTTCGATATACATaGCTTAGGATCAGGAATAAC +
Preference number: 2 (lower is better)
Translates to: LSSPDSWAGLDPATLASCSLRYT*LRIRNN
Trigger: GTTATTCCTGATCCTAAGTCATGTATATCGAAGGCT...GCATGAGGCCAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
3UTR-3UTR GCA 90 bp CCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTCCCAGCCCTGCACACAGAGCAGGAGGCTaGCCGGCTTCTCACACAGCT +
Preference number: 2 (lower is better)
Translates to: PKFHPNDILEVQLLPSPAHRAGG*PASHTA
Trigger: AGCTGTGTGAGAAGCCGGGCAGCCTCCTGCTCTGTG...TGCAGGGCTGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR-3UTR GCA 90 bp GCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGGCAGAGATGATATCCTGGAAGTaGAGCTTCTTCCCAGCCCTG +
Preference number: 2 (lower is better)
Translates to: AAEGCPVLVLLTERIGAEMISWK*SFFPAL
Trigger: CAGGGCTGGGAAGAAGCTGCACTTCCAGGATATCAT...CTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTTCAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR GCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGAGGGATGGCAAACTTCTaGCGGCCACCATCTGTAGTT +
Preference number: 2 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRGMANF*RPPSVV
Trigger: AACTACAGATGGTGGCCGGCAGAAGTTTGCCATCCC...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR GCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAATTCAGCTTCTTGCAGTaGGTTTTTGAAGACTCTTCC +
Preference number: 2 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEFSFLQ*VFEDSS
Trigger: GGAAGAGTCTTCAAAAACGCACTGCAAGAAGCTGAA...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR GCA 90 bp CTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGTGCAGAACTTGCGGTCTTATTCACCTTGATGTaGTTGTATGGTGGGGGCTTG +
Preference number: 2 (lower is better)
Translates to: LAKAQAGQVVGLGAELAVLFTLM*LYGGGL
Trigger: CAAGCCCCCACCATACAAGCACATCAAGGTGAATAA...GACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR GCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCCAAAGGCACACATGGTaGCCCCTTCTCAGGGTGCTC +
Preference number: 2 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLQRHTW*PLLRVL
Trigger: GAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTG...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR GCA 90 bp CACAGGAGCAGCAAGCTTGCTCCTGACAGCATGGCTCTCACACAGCATCCTCCCCACAGCCAAAGAATCTaGCGGGAATTAACTGTGGGC +
Preference number: 2 (lower is better)
Translates to: HRSSKLAPDSMALTQHPPHSQRI*RELTVG
Trigger: GCCCACAGTTAATTCCCGGCAGATTCTTTGGCTGTG...GGGAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp CTCCGCTCCTCTAGGATGAGCCCACTCCTGGCATCTGAAGTGGGACAATGCTGCCACACAGTCACCCTCTaGCTTTCACGACATGAAAGG +
Preference number: 2 (lower is better)
Translates to: LRSSRMSPLLASEVGQCCHTVTL*LSRHER
Trigger: CCTTTCATGTCGTGAAAGGCAGAGGGTGACTGTGTG...GCAGCATTGTCCCACTTCAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp GTCTGGAAGCAACAGGAATCAGGTGTGGTGTGTGAGTCGCCTTCCACCCCACCCGCTCAACTGACACTGTaGCCTTTCAGAACCAACGCA +
Preference number: 2 (lower is better)
Translates to: VWKQQESGVVCESPSTPPAQLTL*PFRTNA
Trigger: TGCGTTGGTTCTGAAAGGGCACAGTGTCAGTTGAGC...GGGTGGGGTGGAAGGCGACTCACACACCACACCTGATTCCTGTTGCTTCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR-3UTR GCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCAGCTCCTCCACTGACATaGTTGCAGCTTCTTCTGCTT +
Preference number: 2 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPAPPLT*LQLLLL
Trigger: AAGCAGAAGAAGCTGCAAGCATGTCAGTGGAGGAGC...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR CCA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGACCCAAATGATATCCTaGAAGTGCAGCTTCTTCCCA +
Preference number: 2 (lower is better)
Translates to: KHCEGDPASHGRVSPEERTQMIS*KCSFFP
Trigger: TGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGT...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCGATGTGCTTGTATGGTaGGGGCTTGCGCTCGCTCTC +
Preference number: 2 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLDVLVW*GLALAL
Trigger: GAGAGCGAGCGCAAGCCCCCACCATACAAGCACATC...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGACGCTTGGTGAAGCACTaGTTCTGGCAGAACTCGCCC +
Preference number: 2 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRRLVKH*FWQNSP
Trigger: GGGCGAGTTCTGCCAGAACCAGTGCTTCACCAAGCG...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp GCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGGCAGAGGATGATCTTGGTCTCTaGGTACTGGCGCTTGGTGAA +
Preference number: 2 (lower is better)
Translates to: AAEGCPVLVLLTERIGAEDDLGL*VLALGE
Trigger: TTCACCAAGCGCCAGTACCCAGAGACCAAGATCATC...CTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTTCAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGGAGAGTAGTTTCCTTTaGGGCCAGCGTCTATTATAC +
Preference number: 2 (lower is better)
Translates to: KHCEGDPASHGRVSPEERESSFL*GQRLLY
Trigger: GTATAATAGACGCTGGCCCCAAAGGAAACTACTCTC...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATAGCTTCTCACTAGGATaGAAAAGAAGCGTTTCTGAG +
Preference number: 2 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDSFSLG*KRSVSE
Trigger: CTCAGAAACGCTTCTTTTCCATCCTAGTGAGAAGCT...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCGCGCGAGCAAGTCAGTaGCTACACAGCTCGTTTCCC +
Preference number: 2 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLARASQ*LHSSFP
Trigger: GGGAAACGAGCTGTGTAGCCACTGACTTGCTCGCGC...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGGACACATCCCCCTGTaGGCGCACACGGGTGGGTAT +
Preference number: 2 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLGHIPL*AHTGGY
Trigger: ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCC...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp CACAGGAGCAGCAAGCTTGCTCCTGACAGCATGGCTCTCACACAGCATCCTCCCCTTGGTCCGGGGCCTTaGATCAAAAGGGTTAAATGG +
Preference number: 2 (lower is better)
Translates to: HRSSKLAPDSMALTQHPPLGPGP*IKRVKW
Trigger: CCATTTAACCCTTTTGATCCAAGGCCCCGGACCAAG...GGGAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp CACAGGAGCAGCAAGCTTGCTCCTGACAGCATGGCTCTCACACAGCATCCTCCCGGAGCACCTATGCGCTaGCTGACTTCTAATGCATCT +
Preference number: 2 (lower is better)
Translates to: HRSSKLAPDSMALTQHPPGAPMR*LTSNAS
Trigger: AGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCC...GGGAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp GCTATCAGACAGGAGCCTCTCCAGCGAGGGGAATCCGTGGCTTTACAGCCCTCCCCCTTTCAACTCAACTaGATCAAACGAGCCAAGGAC +
Preference number: 2 (lower is better)
Translates to: AIRQEPLQRGESVALQPSPFQLN*IKRAKD
Trigger: GTCCTTGGCTCGTTTGATCCAGTTGAGTTGAAAGGG...GGAGGGCTGTAAAGCCACGGATTCCCCTCGCTGGAGAGGCTCCTGTCTGATAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR CAA 90 bp TCTGGCCGACTGCAGACAGCAGGCTGTGCACTGTCTGCGAAGGACTaGAGGACAATGACAAAACTGCCCACAATACACCTGCTTCCACTG +
Preference number: 2 (lower is better)
Translates to: SGRLQTAGCALSAKD*RTMTKLPTIHLLPL
Trigger: CAGTGGAAGCAGGTGTATTGTGGGCAGTTTTGTCATTGTCCTCAAGTCCTTCGCAGACAGTGCACAGCCTGCTGTCTGCAGTCGGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp GATATCCTGGAAGTGCAGCTTCTTCCCAGCCCTGCAGTCATTGCAGAACCAGCTACTGAGTGTGTACGATaGTACGCCACCTGCAGCAGC +
Preference number: 2 (lower is better)
Translates to: DILEVQLLPSPAVIAEPATECVR*YATCSS
Trigger: GCTGCTGCAGGTGGCGTATCATCGTACACACTCAGT...AGCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAGCTGCACTTCCAGGATATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312087.10
3UTR-3UTR TCA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGTGGGCAGTGCAGATaGTGCTGTTGGAGGCGATCA +
Preference number: 2 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRSGQCR*CCWRRS
Trigger: TGATCGCCTCCAACAGCATCATCTGCACTGCCCACT...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGAAGCACTCGTCCTCTaGCTGCCTCTTCCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLEALVL*LPLPFP
Trigger: GGGGAAGGGAAGAGGCAGTCAGAGGACGAGTGCTTC...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp CAGGGCCGCATCAGTAAACACACACTTCAGTCGGTGGTGATTTGTGAAATAGGTGCTATTTGCCCTCTGTaGCTCTCCGCCAGCCCCTCC +
Preference number: 2 (lower is better)
Translates to: QGRISKHTLQSVVICEIGAICPL*LSASPS
Trigger: GGAGGGGCTGGCGGAGAGTCACAGAGGGCAAATAGC...ACCTATTTCACAAATCACCACCGACTGAAGTGTGTGTTTACTGATGCGGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACAAGGGCCACACACCCCTaGACCCCACGCTTACAGGTC +
Preference number: 2 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTRATHP*TPRLQV
Trigger: GACCTGTAAGCGTGGGGTTCAGGGGTGTGTGGCCCT...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGCCCACTCCTGGCATCTaGAGTGGGACAATGCTGCCA +
Preference number: 2 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKPTPGI*SGTMLP
Trigger: TGGCAGCATTGTCCCACTTCAGATGCCAGGAGTGGG...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp TCTCGACCACCACTGAGTTGGTTTGAGTCCCTGCAGAAAATCCCACTCGGAGGAAGAAGTGCCGCCTTCTaGCTCAGCAAGAGTAAGGGG +
Preference number: 2 (lower is better)
Translates to: SRPPLSWFESLQKIPLGGRSAAF*LSKSKG
Trigger: CCCCTTACTCTTGCTGAGTCAGAAGGCGGCACTTCT...TCCTCCGAGTGGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR-3UTR TCA 90 bp AGTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCAGCCGCAGAGCTCTATaGGCCCCGCCCAGGTTGCCT +
Preference number: 2 (lower is better)
Translates to: SVYDDTPPAAASWNITSFSRRAL*APPRLP
Trigger: AGGCAACCTGGGCGGGGCTCATAGAGCTCTGCGGCT...GAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420906.6
3UTR-3UTR TCA 90 bp CCCAATGGGTGTGTGTCAGTGTGGACCTCAAACAGCAATTCTCATGGTCACCTACAGTCCCACCATCCGTaGACAGGTCTCGACCACCAC +
Preference number: 2 (lower is better)
Translates to: PNGCVSVWTSNSNSHGHLQSHHP*TGLDHH
Trigger: GTGGTGGTCGAGACCTGTTCACGGATGGTGGGACTG...TAGGTGACCATGAGAATTGCTGTTTGAGGTCCACACTGACACACACCCATTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420906.6
3UTR-3UTR TCA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGCAGCAGCTTCTTCACTaGCTCCTGAGGATTCTGCCA +
Preference number: 2 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKQQLLH*LLRILP
Trigger: TGGCAGAATCCTCAGGAGTCAGTGAAGAAGCTGCTG...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR TCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCATGGCCGTTTTGTCAGTaGTTGTGTCTCTCTTCCGAA +
Preference number: 2 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPWPFCQ*LCLSSE
Trigger: TTCGGAAGAGAGACACAATCACTGACAAAACGGCCA...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR GCA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATATGATATCCTGGAAGTaGAGCTTCTTCCCAGCCCTG +
Preference number: 2 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYMISWK*SFFPAL
Trigger: CAGGGCTGGGAAGAAGCTGCACTTCCAGGATATCAT...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR GCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCCTGGAAGATGGGCACTaGACACGCCGGGGTTTAGAT +
Preference number: 2 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLLEDGH*TRRGLD
Trigger: ATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAG...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR GCA 90 bp GGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAATGGATTGTGCCACTTACTaGACTCCAGCCTGGCCAACA +
Preference number: 2 (lower is better)
Translates to: GQVAAAPNSRPALVKGKMDCATY*TPAWPT
Trigger: TGTTGGCCAGGCTGGAGTGCAGTAAGTGGCACAATC...CATTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp TCTCGACCACCACTGAGTTGGTTTGAGTCCCTGCAGAAAATCCCACTCGGAGGAAGACCTGGCCAGAAGTaGCGCCTTCTGACTCAGCAA +
Preference number: 2 (lower is better)
Translates to: SRPPLSWFESLQKIPLGGRPGQK*RLLTQQ
Trigger: TTGCTGAGTCAGAAGGCGGCACTTCTGGCCAGGTCT...TCCTCCGAGTGGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR-3UTR GCA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGTTACATCATTCTAAGTaGAGTACAGAGCAGCTGGGT +
Preference number: 2 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWLHHSK*STEQLG
Trigger: ACCCAGCTGCTCTGTACTGCACTTAGAATGATGTAA...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR CCA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAATTGGGTTTGAAGGGTTaGAAGCATGGCAGCTCACAC +
Preference number: 2 (lower is better)
Translates to: LRARKGATRRRVSSDPWELGLKG*KHGSSH
Trigger: GTGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAA...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR-3UTR CCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTACCCAAATGATATCCTaGAAGTGCAGCTTCTTCCCA +
Preference number: 2 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTTQMIS*KCSFFP
Trigger: TGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGT...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGAACATTTTTGGGATaGCAAACTTCTGCCGGCCAC +
Preference number: 2 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYGTFLG*QTSAGH
Trigger: GTGGCCGGCAGAAGTTTGCCATCCCAAAAATGTTCC...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAGGTCGTCGAGGTCTTTaGTCTATCCCCGAGGAATCC +
Preference number: 2 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRGRRGL*SIPEES
Trigger: GGATTCCTCGGGGATAGACCAAAGACCTCGACGACC...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp AATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGTCACTCCTTTCGCCATaGAGCTCAGGGCCGCATCAG +
Preference number: 2 (lower is better)
Translates to: NKVVLEDGHCTRRGLDVKSLLSP*SSGPHQ
Trigger: CTGATGCGGCCCTGAGCTCCATGGCGAAAGGAGTGA...CTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCCACAGAGTGCTGAGATaGAAGCCACTCTGGGTGGCA +
Preference number: 2 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLHRVLR*KPLWVA
Trigger: TGCCACCCAGAGTGGCTTCCATCTCAGCACTCTGTG...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTACCGGAAGGGATCTTTTaGGCAAGTGACAGCGGGGCC +
Preference number: 2 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLPEGIF*ASDSGA
Trigger: GGCCCCGCTGTCACTTGCCCAAAAGATCCCTTCCGG...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGAAAAATGCGGACACCTaGGGCAGGACACCAGGCTGC +
Preference number: 2 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKKNADT*GRTPGC
Trigger: GCAGCCTGGTGTCCTGCCCCAGGTGTCCGCATTTTT...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp CTCCGCTCCTCTAGGATGAGCCCACTCCTGGCATCTGAAGTGGGACAATGCTGCGAATTTCTGTACTCTTaGCAAGCCAATGGTCCTCCC +
Preference number: 2 (lower is better)
Translates to: LRSSRMSPLLASEVGQCCEFLYS*QANGPP
Trigger: GGGAGGACCATTGGCTTGCCAAGAGTACAGAAATTC...GCAGCATTGTCCCACTTCAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp CACAGGAGCAGCAAGCTTGCTCCTGACAGCATGGCTCTCACACAGCATCCTCCCGAATTTCTGTACTCTTaGCAAGCCAATGGTCCTCCC +
Preference number: 2 (lower is better)
Translates to: HRSSKLAPDSMALTQHPPEFLYS*QANGPP
Trigger: GGGAGGACCATTGGCTTGCCAAGAGTACAGAAATTC...GGGAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp AAACCAGGAGATGGTCCTCTCGGAAAACTCCGCTCCTCTAGGATGAGCCCACTCCTGAAGATGCTGCCGTaGAAGCCCGATTTCGCTTCT +
Preference number: 2 (lower is better)
Translates to: KPGDGPLGKLRSSRMSPLLKMLP*KPDFAS
Trigger: AGAAGCGAAATCGGGCTTCCACGGCAGCATCTTCAG...GAGTGGGCTCATCCTAGAGGAGCGGAGTTTTCCGAGAGGACCATCTCCTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR CCA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGTCCCTTCCTGCTTCGTaGCATGGAGACTGTGGTCTT +
Preference number: 2 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKSLPAS*HGDCGL
Trigger: AAGACCACAGTCTCCATGCCACGAAGCAGGAAGGGA...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR TCA 90 bp ATCCTGCAACATTTGAGCAGAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACTGAGTGTGTACGATaGTACGCCACCTGCAGCAGC +
Preference number: 2 (lower is better)
Translates to: ILQHLSRANRGTQPALSHTECVR*YATCSS
Trigger: GCTGCTGCAGGTGGCGTATCATCGTACACACTCAGT...ATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTCTGCTCAAATGTTGCAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGCTTGCAGTGCGTTTTTaGAGACTCTTCCGATCCCTC +
Preference number: 2 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWLAVRF*RLFRSL
Trigger: GAGGGATCGGAAGAGTCTTCAAAAACGCACTGCAAG...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAAGTCGGTGGTGATTTGTaGAATAGGTTTAGCAAAAAT +
Preference number: 2 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEVGGDL*NRFSKN
Trigger: ATTTTTGCTAAACCTATTTCACAAATCACCACCGAC...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp AATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGGGCAGAGGGCACATGTaGTCAGCAGAGACTGCATCT +
Preference number: 2 (lower is better)
Translates to: NKVVLEDGHCTRRGLDVKGRGHM*SAETAS
Trigger: AGATGCAGTCTCTGCTGATCACATGTGCCCTCTGCC...CTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCGATGCCAAGGAATCCTaGGGGATTGGGGCGGTTTTT +
Preference number: 2 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLDAKES*GIGAVF
Trigger: AAAAACCGCCCCAATCCCTCAGGATTCCTTGGCATC...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp GCTATCAGACAGGAGCCTCTCCAGCGAGGGGAATCCGTGGCTTTACAGCCCTCCAGTCTTTACTTTGGGTaGCTGCTTATTGAACCAGAG +
Preference number: 2 (lower is better)
Translates to: AIRQEPLQRGESVALQPSSLYFG*LLIEPE
Trigger: CTCTGGTTCAATAAGCAGTCACCCAAAGTAAAGACT...GGAGGGCTGTAAAGCCACGGATTCCCCTCGCTGGAGAGGCTCCTGTCTGATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp GCTATCAGACAGGAGCCTCTCCAGCGAGGGGAATCCGTGGCTTTACAGCCCTCCAATATGTGCACTACCTaGAGATGCCACCCTATTACA +
Preference number: 2 (lower is better)
Translates to: AIRQEPLQRGESVALQPSNMCTT*RCHPIT
Trigger: TGTAATAGGGTGGCATCTTCAGGTAGTGCACATATT...GGAGGGCTGTAAAGCCACGGATTCCCCTCGCTGGAGAGGCTCCTGTCTGATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp CTCCGCTCCTCTAGGATGAGCCCACTCCTGGCATCTGAAGTGGGACAATGCTGCAGATATATAAAGGCTTaGTGGCCCAATGGCTCTCAG +
Preference number: 2 (lower is better)
Translates to: LRSSRMSPLLASEVGQCCRYIKA*WPNGSQ
Trigger: CTGAGAGCCATTGGGCCATCAAGCCTTTATATATCT...GCAGCATTGTCCCACTTCAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGCAGCAAGCTTGCTCCTaGCAGCATGGCTCTCACACA +
Preference number: 2 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKQQACS*QHGSHT
Trigger: TGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTG...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp AACTGTAAAGCAGCCCCAGTCCCACCATCCGTGAACAGGTCTCGACCACCACTGCCAATGCTGCGCTTATaGAGTCTGAGCATTACTCAC +
Preference number: 2 (lower is better)
Translates to: NCKAAPVPPSVNRSRPPLPMLRL*SLSITH
Trigger: GTGAGTAATGCTCAGACTTCATAAGCGCAGCATTGG...CAGTGGTGGTCGAGACCTGTTCACGGATGGTGGGACTGGGGCTGCTTTACAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR-3UTR TCA 90 bp TCTCGACCACCACTGAGTTGGTTTGAGTCCCTGCAGAAAATCCCACTCGGAGGAAGTGTCATGTTACAATaGTGGCAGGCAGCAGCCCCA +
Preference number: 2 (lower is better)
Translates to: SRPPLSWFESLQKIPLGGSVMLQ*WQAAAP
Trigger: TGGGGCTGCTGCCTGCCATCATTGTAACATGACACT...TCCTCCGAGTGGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR-3UTR TCA 90 bp AGGTCTCGACCACCACTGAGTTGGTTTGAGTCCCTGCAGAAAATCCCACTCGGAATGAGTGGAAACAACTaGGGCACACCCCATCCTTCC +
Preference number: 2 (lower is better)
Translates to: RSRPPLSWFESLQKIPLGMSGNN*GTPHPS
Trigger: GGAAGGATGGGGTGTGCCTCAGTTGTTTCCACTCAT...TCCGAGTGGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCGAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR-3UTR TCA 90 bp CCCGGGCTGTCCGAGACCTCATTCTCAGTTAAGGATGCAGAAGGAGATGAACTTGCTAAACCCAAGAGCTaGAGATGCTGCCGTGGAAGC +
Preference number: 2 (lower is better)
Translates to: PGLSETSFSVKDAEGDELAKPKS*RCCRGS
Trigger: GCTTCCACGGCAGCATCTTCAGCTCTTGGGTTTAGC...AAGTTCATCTCCTTCTGCATCCTTAACTGAGAATGAGGTCTCGGACAGCCCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511904.1
3UTR-3UTR TCA 90 bp GTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACTGGTGTGGGCTCCCACCCACATAGAGAAAGGTaGACTTGGCTTTCCGCTCCT +
Preference number: 2 (lower is better)
Translates to: VQYRAAGFKSNLTGVGSHPHRER*TWLSAP
Trigger: AGGAGCGGAAAGCCAAGTTCACCTTTCTCTATGTGG...GTGGGAGCCCACACCAGTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR GCA 90 bp GCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGGCAGAGAGTTTGTGTTTCGTCTaGACTTTCGTATGGGGACTC +
Preference number: 2 (lower is better)
Translates to: AAEGCPVLVLLTERIGAESLCFV*TFVWGL
Trigger: GAGTCCCCATACGAAAGTGCAGACGAAACACAAACT...CTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTTCAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR-3UTR GCA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGGCTTCTTCCCAGCCCTaGAGTCATTGCAGAACCAGC +
Preference number: 2 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSEASSQP*SHCRTS
Trigger: GCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAGC...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR GCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTACAAAGGCACACATGGTaGCCCCTTCTCAGGGTGCTC +
Preference number: 2 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLQRHTW*PLLRVL
Trigger: GAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTG...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR GCA 90 bp CACAGGAGCAGCAAGCTTGCTCCTGACAGCATGGCTCTCACACAGCATCCTCCCATGCCAATGTCATGCTaGTCTTTGGACACCATTTGG +
Preference number: 2 (lower is better)
Translates to: HRSSKLAPDSMALTQHPPMPMSC*SLDTIW
Trigger: CCAAATGGTGTCCAAAGAGCAGCATGACATTGGCAT...GGGAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp GCTATCAGACAGGAGCCTCTCCAGCGAGGGGAATCCGTGGCTTTACAGCCCTCCATTCAGGACCTCTATTaGCAATATGTGCACTACCTG +
Preference number: 2 (lower is better)
Translates to: AIRQEPLQRGESVALQPSIQDLY*QYVHYL
Trigger: CAGGTAGTGCACATATTGGCAATAGAGGTCCTGAAT...GGAGGGCTGTAAAGCCACGGATTCCCCTCGCTGGAGAGGCTCCTGTCTGATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGAGAAATGAAGCAAGTTaGCAAAGTCATAACGACCTT +
Preference number: 2 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKRNEAS*QSHNDL
Trigger: AAGGTCGTTATGACTTTGGCAACTTGCTTCATTTCT...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCACCTGGATGGTCAGCATaGTTCAAAATATTACCCGAG +
Preference number: 2 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPPGWSA*FKILPE
Trigger: CTCGGGTAATATTTTGAAGCATGCTGACCATCCAGG...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp AGCAGCCCCAGTCCCACCATCCGTGAACAGGTCTCGACCACCACTGAGTTGGTTTGCTATCATGTACTCTaGAAGTCCAGAACACAGGAG +
Preference number: 2 (lower is better)
Translates to: SSPSPTIREQVSTTTELVCYHVL*KSRTQE
Trigger: CTCCTGTGTTCTGGACTTGCAGAGTACATGATAGCA...AACCAACTCAGTGGTGGTCGAGACCTGTTCACGGATGGTGGGACTGGGGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR-3UTR GCA 90 bp AACAGGTCTCGACCACCACTGAGTTGGTTTGAGTCCCTGCAGAAAATCCCACTCGGCCTGTCCAACCCTTaGCTCACTACCCTGTTCCAA +
Preference number: 2 (lower is better)
Translates to: NRSRPPLSWFESLQKIPLGLSNP*LTTLFQ
Trigger: TTGGAACAGGGTAGTGAGGCAAGGGTTGGACAGGCC...GAGTGGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCGAGACCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR-3UTR GCA 90 bp GCTATCAGACAGGAGCCTCTCCAGCGAGGGGAATCCGTGGCTTTACAGCCCTCCTTCTCTTCATGGGAATaGACTCTTCTCTCACAGACT +
Preference number: 2 (lower is better)
Translates to: AIRQEPLQRGESVALQPSFSSWE*TLLSQT
Trigger: AGTCTGTGAGAGAAGAGTGCATTCCCATGAAGAGAA...GGAGGGCTGTAAAGCCACGGATTCCCCTCGCTGGAGAGGCTCCTGTCTGATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR GCA 90 bp ATCCTGCAACATTTGAGCAGAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATCTGCATCTCCCTTCCTaGTTCGTGGCATGGAGACTG +
Preference number: 2 (lower is better)
Translates to: ILQHLSRANRGTQPALSHLHLPS*FVAWRL
Trigger: CAGTCTCCATGCCACGAAGCAGGAAGGGAGATGCAG...ATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTCTGCTCAAATGTTGCAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR GCA 90 bp GGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAATGCTCTTCCGAAGACTGTaGTTGTCCGTCCTGAGTCTT +
Preference number: 2 (lower is better)
Translates to: GQVAAAPNSRPALVKGKMLFRRL*LSVLSL
Trigger: AAGACTCAGGACGGACAAGCACAGTCTTCGGAAGAG...CATTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR CCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCAAGGATGGCTCAGTGGTaGGGAGGCGCTCCCTCCCGA +
Preference number: 2 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSRMAQW*GGAPSR
Trigger: TCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCT...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGGTTTCTAGCGACCCTTaGGAAAAGCCTACGCTACAC +
Preference number: 2 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWVSSDP*EKPTLH
Trigger: GTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAAC...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACACGTGGTCAGCCCCAGTaGCGAGAAACCCTGCAAGCT +
Preference number: 2 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTRGQPQ*RETLQA
Trigger: AGCTTGCAGGGTTTCTCGCCACTGGGGCTGACCACG...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGATTACAGTATCCCCTTaGTCCGGGGCCTTGGATCAA +
Preference number: 2 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKITVSP*SGALDQ
Trigger: TTGATCCAAGGCCCCGGACCAAGGGGATACTGTAAT...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp GCTATCAGACAGGAGCCTCTCCAGCGAGGGGAATCCGTGGCTTTACAGCCCTCCTGTCATGCTGCTCTTTaGACACCATTTGGTCATTTG +
Preference number: 2 (lower is better)
Translates to: AIRQEPLQRGESVALQPSCHAAL*TPFGHL
Trigger: CAAATGACCAAATGGTGTCCAAAGAGCAGCATGACA...GGAGGGCTGTAAAGCCACGGATTCCCCTCGCTGGAGAGGCTCCTGTCTGATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp GGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAATGTCCTGGCATCTGAAGTaGGACAATGCTGCCACACAT +
Preference number: 2 (lower is better)
Translates to: GQVAAAPNSRPALVKGKMSWHLK*DNAATH
Trigger: ATGTGTGGCAGCATTGTCCCACTTCAGATGCCAGGA...CATTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGGCCACCCTATTACAATaGAGTACTTACGTTTTTAGA +
Preference number: 2 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKATLLQ*STYVFR
Trigger: TCTAAAAACGTAAGTACTCCATTGTAATAGGGTGGC...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAGCAGAGGTGGCAAAATaGAGTCGAAGGTTTGCCACA +
Preference number: 2 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRAEVAK*SRRFAT
Trigger: TGTGGCAAACCTTCGACTTCATTTTGCCACCTCTGC...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp CAGGGCCGCATCAGTAAACACACACTTCAGTCGGTGGTGATTTGTGAAATAGGTTTTGTCCAGGAACGCTaGGCTGGGCTCAGACGGTCA +
Preference number: 2 (lower is better)
Translates to: QGRISKHTLQSVVICEIGFVQER*AGLRRS
Trigger: TGACCGTCTGAGCCCAGCTCAGCGTTCCTGGACAAA...ACCTATTTCACAAATCACCACCGACTGAAGTGTGTGTTTACTGATGCGGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp TGCTGTTTTGACGTAAGCATTGGTAGTCCCTTACCTGCCGGAAGGGATCTTTTGTTTGTCCAGGAACGCTaGGCTGGGCTCAGACGGTCA +
Preference number: 2 (lower is better)
Translates to: CCFDVSIGSPLPAGRDLLFVQER*AGLRRS
Trigger: TGACCGTCTGAGCCCAGCTCAGCGTTCCTGGACAAA...CAAAAGATCCCTTCCGGCAGGTAAGGGACTACCAATGCTTACGTCAAAACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp CGGAAGAAAGGCCGGCCTGAGGACGGACAGCTGGGTTCTCACTTCAGGTGCCTGGAAAAGAAGCGTTTCTaGGGAACAATTCACATTAGT +
Preference number: 2 (lower is better)
Translates to: RKKGRPEDGQLGSHFRCLEKKRF*GTIHIS
Trigger: ACTAATGTGAATTGTTCCTCAGAAACGCTTCTTTTC...CAGGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGGCAGAGGGCACATGTaGTCAGCAGAGACTGCATCT +
Preference number: 2 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLGRGHM*SAETAS
Trigger: AGATGCAGTCTCTGCTGATCACATGTGCCCTCTGCC...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGAGGAGCATAAATCTATaGGCCGATCCAGTATTTTCT +
Preference number: 2 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWRSINL*ADPVFS
Trigger: AGAAAATACTGGATCGGCTCATAGATTTATGCTCCT...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCAGAAGAAAGGCCGGCCTaGGGACGGACAGCTGGGTTC +
Preference number: 2 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSEERPA*GRTAGF
Trigger: GAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTC...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp CACAGGAGCAGCAAGCTTGCTCCTGACAGCATGGCTCTCACACAGCATCCTCCCATGAAACATGAGGGCTaGTGCTCTATAGAAGCAACT +
Preference number: 2 (lower is better)
Translates to: HRSSKLAPDSMALTQHPPMKHEG*CSIEAT
Trigger: AGTTGCTTCTATAGAGCATCAGCCCTCATGTTTCAT...GGGAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGCACCTTCTGCTTTTATaGGCTGAAGGGCAAGTAAGC +
Preference number: 2 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKHLLLL*AEGQVS
Trigger: GCTTACTTGCCCTTCAGCTCATAAAAGCAGAAGGTG...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp AAACCAGGAGATGGTCCTCTCGGAAAACTCCGCTCCTCTAGGATGAGCCCACTCCACCTTCTGCTTTTATaGGCTGAAGGGCAAGTAAGC +
Preference number: 2 (lower is better)
Translates to: KPGDGPLGKLRSSRMSPLHLLLL*AEGQVS
Trigger: GCTTACTTGCCCTTCAGCTCATAAAAGCAGAAGGTG...GAGTGGGCTCATCCTAGAGGAGCGGAGTTTTCCGAGAGGACCATCTCCTGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp GGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAATGACTCGCATGGTACTGTaGATAGCACACCTTCTGCTT +
Preference number: 2 (lower is better)
Translates to: GQVAAAPNSRPALVKGKMTRMVL*IAHLLL
Trigger: AAGCAGAAGGTGTGCTATTCACAGTACCATGCGAGT...CATTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp AAACCAGGAGATGGTCCTCTCGGAAAACTCCGCTCCTCTAGGATGAGCCCACTCCACCTATGCGCTGGCTaGCTTCTAATGCATCTATCA +
Preference number: 2 (lower is better)
Translates to: KPGDGPLGKLRSSRMSPLHLCAG*LLMHLS
Trigger: TGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTG...GAGTGGGCTCATCCTAGAGGAGCGGAGTTTTCCGAGAGGACCATCTCCTGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp AATTTTTGCATGAACACTGAGGAAAGGCCCAAAGATCCATCTAGAGCAGGTGGGTCCGCTCCTCTAGGATaGGCCCACTCCTGGCATCTG +
Preference number: 2 (lower is better)
Translates to: NFCMNTEERPKDPSRAGGSAPLG*AHSWHL
Trigger: CAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGA...CCCACCTGCTCTAGATGGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp GGTTTGAGTCCCTGCAGAAAATCCCACTCGGAGGAGTGGTCGCTGAGGATTCAGCCAATGCTGCGCTTATaGAGTCTGAGCATTACTCAC +
Preference number: 2 (lower is better)
Translates to: GLSPCRKSHSEEWSLRIQPMLRL*SLSITH
Trigger: GTGAGTAATGCTCAGACTTCATAAGCGCAGCATTGG...CTGAATCCTCAGCGACCACTCCTCCGAGTGGGATTTTCTGCAGGGACTCAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR-3UTR TCA 90 bp AGTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCGGTTGCCTAGGTCCCTaGCCTTCCTGCACTGGAAGG +
Preference number: 2 (lower is better)
Translates to: SVYDDTPPAAASWNITSFGCLGP*PSCTGR
Trigger: CCTTCCAGTGCAGGAAGGTCAGGGACCTAGGCAACC...GAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420906.6
3UTR-3UTR TCA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGTTCTTCACTGACTCCTaGGGATTCTGCCATTTCTCC +
Preference number: 2 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKFFTDS*GFCHFS
Trigger: GGAGAAATGGCAGAATCCTCAGGAGTCAGTGAAGAA...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR GCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACACAGCCCTGCAGTCATTaGAGAACCAGCTGCCGTCAG +
Preference number: 2 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTQPCSH*RTSCRQ
Trigger: CTGACGGCAGCTGGTTCTGCAATGACTGCAGGGCTG...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR GCA 90 bp AATGATCACAATGGCAGTTTCGAGGAATCCAGGGTCAGTCCTCACACGGGCCTCATGATATCCTGGAAGTaGAGCTTCTTCCCAGCCCTG +
Preference number: 2 (lower is better)
Translates to: NDHNGSFEESRVSPHTGLMISWK*SFFPAL
Trigger: CAGGGCTGGGAAGAAGCTGCACTTCCAGGATATCAT...GAGGCCCGTGTGAGGACTGACCCTGGATTCCTCGAAACTGCCATTGTGATCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR GCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTATGTATGGTGGGGGCTTaGGCTCGCTCTCCTGTGTTT +
Preference number: 2 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLCMVGA*ARSPVF
Trigger: AAACACAGGAGAGCGAGCGCAAGCCCCCACCATACA...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR GCA 90 bp TGCTGTTTTGACGTAAGCATTGGTAGTCCCTTACCTGCCGGAAGGGATCTTTTGTGCGGTCTCACGCCCTaGAAAGTCACTCCTTTCGCC +
Preference number: 2 (lower is better)
Translates to: CCFDVSIGSPLPAGRDLLCGLTP*KVTPFA
Trigger: GGCGAAAGGAGTGACTTTGCAGGGCGTGAGACCGCA...CAAAAGATCCCTTCCGGCAGGTAAGGGACTACCAATGCTTACGTCAAAACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR GCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCGTGATCAGCAGAGACTaGATCTTCCATCACCAGACC +
Preference number: 2 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLVISRD*IFHHQT
Trigger: GGTCTGGTGATGGAAGATGCAGTCTCTGCTGATCAC...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR GCA 90 bp GAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCATCTATCAGTTATGGGCTAGGCAGGACACCAGGCTaGTCCCCGACATTAAGACAA +
Preference number: 2 (lower is better)
Translates to: EGAPMRWLTSNASISYGLGRTPG*SPTLRQ
Trigger: TTGTCTTAATGTCGGGGAGCAGCCTGGTGTCCTGCC...TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGCTGGCTGGCCACCCATaGAAAATTCATCATGCTGTA +
Preference number: 2 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKLAGHP*KIHHAV
Trigger: TACAGCATGATGAATTTTGCATGGGTGGCCAGCCAG...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCACACCATTTGGTCATTTaGAGGGTTTTGCTTTCTCCA +
Preference number: 2 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPHHLVI*RVLLSP
Trigger: TGGAGAAAGCAAAACCCTGCAAATGACCAAATGGTG...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCGACTGTCCCTCTCACTaGAGAGTGCTGAGTTCACTT +
Preference number: 2 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSDCPSH*RVLSSL
Trigger: AAGTGAACTCAGCACTCTGCAGTGAGAGGGACAGTC...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp GCTATCAGACAGGAGCCTCTCCAGCGAGGGGAATCCGTGGCTTTACAGCCCTCCTTCACCTCTAGTGAATaGCTCAAGTTTTACACTGGA +
Preference number: 2 (lower is better)
Translates to: AIRQEPLQRGESVALQPSFTSSE*LKFYTG
Trigger: TCCAGTGTAAAACTTGAGGCATTCACTAGAGGTGAA...GGAGGGCTGTAAAGCCACGGATTCCCCTCGCTGGAGAGGCTCCTGTCTGATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGTCTGGGGTCAGCCTCTaGCGTCTTTTGAGGAGTACT +
Preference number: 2 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKSGVSL*RLLRST
Trigger: AGTACTCCTCAAAAGACGGCAGAGGCTGACCCCAGA...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR CCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGAAGGGTTGGAAGCATaGCAGCTCACACAGCTGTGG +
Preference number: 2 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLEGLEA*QLTQLW
Trigger: CCACAGCTGTGTGAGCTGCCATGCTTCCAACCCTTC...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR-3UTR CCA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGCTTGATGTGCTTGTATaGTGGGGGCTTGCGCTCGCT +
Preference number: 2 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLLDVLV*WGLALA
Trigger: AGCGAGCGCAAGCCCCCACCATACAAGCACATCAAG...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGTTGGTCTCTGGGTACTaGCGCTTGGTGAAGCACTGG +
Preference number: 2 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLLVSGY*RLVKHW
Trigger: CCAGTGCTTCACCAAGCGCCAGTACCCAGAGACCAA...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGGAATCCACTGCAATTaGAGGCTCCACACCGGCAGA +
Preference number: 2 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLGIHCN*RLHTGR
Trigger: TCTGCCGGTGTGGAGCCTCCAATTGCAGTGGATTCC...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATGGCCAAGCGGCCGCCTaGCGCTATTTGCCCTCTGTG +
Preference number: 2 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHGQAAA*RYLPSV
Trigger: CACAGAGGGCAAATAGCGCCAGGCGGCCGCTTGGCC...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATAGGATGGCTCAGTGGTaGGGAGGCGCTCCCTCCCGA +
Preference number: 2 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHRMAQW*GGAPSR
Trigger: TCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCT...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCAGGTAGTCCTGGAAGATaGGCACTGCACACGCCGGGG +
Preference number: 2 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSGSPGR*ALHTPG
Trigger: CCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACC...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp CTCCGCTCCTCTAGGATGAGCCCACTCCTGGCATCTGAAGTGGGACAATGCTGCTCTTTGGACACCATTTaGTCATTTGCAGGGTTTTGC +
Preference number: 2 (lower is better)
Translates to: LRSSRMSPLLASEVGQCCSLDTI*SFAGFC
Trigger: GCAAAACCCTGCAAATGACCAAATGGTGTCCAAAGA...GCAGCATTGTCCCACTTCAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp TTCATCTATGTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCACTCACACTGCAGCGTaGGCAGCTAAATGGCCTTCA +
Preference number: 2 (lower is better)
Translates to: FIYVFSRSGQLPRPGRLSTHTAA*AAKWPS
Trigger: TGAAGGCCATTTAGCTGCCCACGCTGCAGTGTGAGT...GCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGACATAGATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR CAA 90 bp CATTTCTCCCAAAGACTCTGCAGCAATGCCAGCCTCCTTGGCTACTaGAGGGTTGAGATGAAGCTGGTCCCCCACATAGAGAAAGGTGAA +
Preference number: 2 (lower is better)
Translates to: HFSQRLCSNASLLGY*RVEMKLVPHIEKGE
Trigger: TTCACCTTTCTCTATGTGGGGGACCAGCTTCATCTCAACCCTCAAGTAGCCAAGGAGGCTGGCATTGCTGCAGAGTCTTTGGGAGAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR TCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTGTCGGTGGTGATTTGTaGAATAGGTTTAGCAAAAAT +
Preference number: 2 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTVGGDL*NRFSKN
Trigger: ATTTTTGCTAAACCTATTTCACAAATCACCACCGAC...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACAACAGCCACCAGCCAGTaGAACTTCCAGTCAGTGCTC +
Preference number: 2 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTTATSQ*NFQSVL
Trigger: GAGCACTGACTGGAAGTTTCACTGGCTGGTGGCTGT...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp GGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAATGCTCTATAGAAGCAACTaGTGCAGAGGTTGGTGTACA +
Preference number: 2 (lower is better)
Translates to: GQVAAAPNSRPALVKGKMLYRSN*CRGWCT
Trigger: TGTACACCAACCTCTGCATCAGTTGCTTCTATAGAG...CATTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp GGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAATGTACTCAAGACAGCACTaGGATGTAACTACACCTGGA +
Preference number: 2 (lower is better)
Translates to: GQVAAAPNSRPALVKGKMYSRQH*DVTTPG
Trigger: TCCAGGTGTAGTTACATCTCAGTGCTGTCTTGAGTA...CATTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp AGGTCTCGACCACCACTGAGTTGGTTTGAGTCCCTGCAGAAAATCCCACTCGGATGCGCTTATGAAGTCTaGGCATTACTCACACTGCAG +
Preference number: 2 (lower is better)
Translates to: RSRPPLSWFESLQKIPLGCAYEV*ALLTLQ
Trigger: CTGCAGTGTGAGTAATGCTCAGACTTCATAAGCGCA...TCCGAGTGGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCGAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR-3UTR TCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCCCAAAGAACTGTACGTaGTACTGGCGTGCACTCTTT +
Preference number: 2 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSPKNCT*YWRALF
Trigger: AAAGAGTGCACGCCAGTATCACGTACAGTTCTTTGG...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR GCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCAGCACCTCTCAGTAGGTaGCCTGGCAGAGGGCACATG +
Preference number: 2 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSAPLSR*PGRGHM
Trigger: CATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGC...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR GCA 90 bp AATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGATCTGCTCCCCAAAGTaGACTGCAAAGCCGATTCTG +
Preference number: 2 (lower is better)
Translates to: NKVVLEDGHCTRRGLDVKICSPK*TAKPIL
Trigger: CAGAATCGGCTTTGCAGTGCACTTTGGGGAGCAGAT...CTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR GCA 90 bp GACCTCTATTGCCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGATTCCGTGCAAAGCCCTaGTGCAGCTCTGGACAGCCC +
Preference number: 2 (lower is better)
Translates to: DLYCQYVHYLKMPPYYNGFRAKP*CSSGQP
Trigger: GGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAA...TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp TGTGCACTACCTGAAGATGCCACCCTATTACAATGGAGTACTTACGTTTTTAGAGGGCCACCCCTTCCGTaGAAAGCCCTGCTGCAGCTC +
Preference number: 2 (lower is better)
Translates to: CALPEDATLLQWSTYVFRGPPLP*KALLQL
Trigger: GAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCC...TCTAAAAACGTAAGTACTCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGGAGGACCACTTTTCATaGCAAAGCAAAATTTATACT +
Preference number: 2 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWEDHFS*QSKIYT
Trigger: AGTATAAATTTTGCTTTGGCATGAAAAGTGGTCCTC...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp CTCCGCTCCTCTAGGATGAGCCCACTCCTGGCATCTGAAGTGGGACAATGCTGCTTTACTTTGGGTGACTaGTTATTGAACCAGAGCCAT +
Preference number: 2 (lower is better)
Translates to: LRSSRMSPLLASEVGQCCFTLGD*LLNQSH
Trigger: ATGGCTCTGGTTCAATAAGCAGTCACCCAAAGTAAA...GCAGCATTGTCCCACTTCAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGCTGATGCCAATGTCATaGTGCTCTTTGGACACCATT +
Preference number: 2 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKLMPMS*CSLDTI
Trigger: AATGGTGTCCAAAGAGCAGCATGACATTGGCATCAG...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp GGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAATGTACGTGATACTGGCGTaGACTCTTTTTCTGACCTCT +
Preference number: 2 (lower is better)
Translates to: GQVAAAPNSRPALVKGKMYVILA*TLFLTS
Trigger: AGAGGTCAGAAAAAGAGTGCACGCCAGTATCACGTA...CATTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR CCA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCAACCCAAATGATATCCTaGAAGTGCAGCTTCTTCCCA +
Preference number: 2 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPTQMIS*KCSFFP
Trigger: TGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGT...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATAGGATGGCTCAGTGGTaGGGAGGCGCTCCCTCCCGA +
Preference number: 2 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNRMAQW*GGAPSR
Trigger: TCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCT...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCAGCCCCTCAGGACACGTaGGCAAAGGCACACATGGTG +
Preference number: 2 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSAPQDT*AKAHMV
Trigger: CACCATGTGTGCCTTTGCCCACGTGTCCTGAGGGGC...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGTTTCTTAGGACACTTTaGGAGAAGTTAGAGTCTGAA +
Preference number: 2 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWFLRTL*EKLESE
Trigger: TTCAGACTCTAACTTCTCCCAAAGTGTCCTAAGAAA...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCATCCTCAGAACAAAGCTaGGCAGGGCCGAGAGCCAGC +
Preference number: 2 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSSSEQS*AGPRAS
Trigger: GCTGGCTCTCGGCCCTGCCCAGCTTTGTTCTGAGGA...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCGGAATCCTGAGGGATTaGGGCGGTTTTTGTGTTTTG +
Preference number: 2 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLGILRD*GGFCVL
Trigger: CAAAACACAAAAACCGCCCCAATCCCTCAGGATTCC...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp GCTATCAGACAGGAGCCTCTCCAGCGAGGGGAATCCGTGGCTTTACAGCCCTCCGCCACCCTATTACAATaGAGTACTTACGTTTTTAGA +
Preference number: 2 (lower is better)
Translates to: AIRQEPLQRGESVALQPSATLLQ*STYVFR
Trigger: TCTAAAAACGTAAGTACTCCATTGTAATAGGGTGGC...GGAGGGCTGTAAAGCCACGGATTCCCCTCGCTGGAGAGGCTCCTGTCTGATAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTCCACAGGGAGTGTGCTaGGGAGGAGCCTGGTCTGGC +
Preference number: 2 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTPQGVC*GGAWSG
Trigger: GCCAGACCAGGCTCCTCCCCAGCACACTCCCTGTGG...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGCTTGCAGTGCGTTTTTaGAGACTCTTCCGATCCCTC +
Preference number: 2 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLLAVRF*RLFRSL
Trigger: GAGGGATCGGAAGAGTCTTCAAAAACGCACTGCAAG...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp AATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGAGTGGGAGGGAACCTTaGCATTCGGAGAAATTCAAG +
Preference number: 2 (lower is better)
Translates to: NKVVLEDGHCTRRGLDVKSGREP*HSEKFK
Trigger: CTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACT...CTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR GCA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATCACAGAGCAGGAGGCTaGCCGGCTTCTCACACAGCT +
Preference number: 2 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHHRAGG*PASHTA
Trigger: AGCTGTGTGAGAAGCCGGGCAGCCTCCTGCTCTGTG...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR-3UTR GCA 90 bp CAGGGCCGCATCAGTAAACACACACTTCAGTCGGTGGTGATTTGTGAAATAGGTCATTGCAGAACCAGCTaGCGTCAGGCATCTCGATGT +
Preference number: 2 (lower is better)
Translates to: QGRISKHTLQSVVICEIGHCRTS*RQASRC
Trigger: ACATCGAGATGCCTGACGGCAGCTGGTTCTGCAATG...ACCTATTTCACAAATCACCACCGACTGAAGTGTGTGTTTACTGATGCGGCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR GCA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGTTCAGCTTCTTGCAGTaGGTTTTTGAAGACTCTTCC +
Preference number: 2 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGFSFLQ*VFEDSS
Trigger: GGAAGAGTCTTCAAAAACGCACTGCAAGAAGCTGAA...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR GCA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGCACCATTTGGTCATTTaGAGGGTTTTGCTTTCTCCA +
Preference number: 2 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKHHLVI*RVLLSP
Trigger: TGGAGAAAGCAAAACCCTGCAAATGACCAAATGGTG...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp AATTTTTGCATGAACACTGAGGAAAGGCCCAAAGATCCATCTAGAGCAGGTGGGGAAGTGGGACAATGCTaGCACACATGGGACTGTCCC +
Preference number: 2 (lower is better)
Translates to: NFCMNTEERPKDPSRAGGEVGQC*HTWDCP
Trigger: GGGACAGTCCCATGTGTGGCAGCATTGTCCCACTTC...CCCACCTGCTCTAGATGGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTCCTGGTCTGGCCGACTaGAGACAGCAGGCTGTGCAC +
Preference number: 2 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTPGLAD*RQQAVH
Trigger: GTGCACAGCCTGCTGTCTGCAGTCGGCCAGACCAGG...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp CCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTCCCAGCCCTGCAACACATACTCCTTTTTaGCAGTCACTCCTCGCTCAG +
Preference number: 2 (lower is better)
Translates to: PKFHPNDILEVQLLPSPATHTPF*QSLLAQ
Trigger: CTGAGCGAGGAGTGACTGCCAAAAAGGAGTATGTGT...TGCAGGGCTGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR-3UTR CCA 90 bp TCCTCGTCGATCAGCTCCCCAACGTACTCGTTAACAAATTCTCCCTTTCTGATGTTCCGAGCAGTGAAGTaGGCAGTGCAGATGATGCTG +
Preference number: 2 (lower is better)
Translates to: SSSISSPTYSLTNSPFLMFRAVK*AVQMML
Trigger: CAGCATCATCTGCACTGCCCACTTCACTGCTCGGAA...CATCAGAAAGGGAGAATTTGTTAACGAGTACGTTGGGGAGCTGATCGACGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATAGGGTGGAAGGCCGCTaGGCAGGACTCACAGCACAG +
Preference number: 2 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNRVEGR*AGLTAQ
Trigger: CTGTGCTGTGAGTCCTGCCCAGCGGCCTTCCACCCT...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCACCAGGAACGCTGAGCTaGGCTCAGACGGTCATCAGT +
Preference number: 2 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSPGTLS*AQTVIS
Trigger: ACTGATGACCGTCTGAGCCCAGCTCAGCGTTCCTGG...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAACAGCTCGTTTCCCCTaGGTCCTCTGTGTAGTTAAC +
Preference number: 2 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLTARFP*VLCVVN
Trigger: GTTAACTACACAGAGGACCCAGGGGAAACGAGCTGT...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp GGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAATGTGTCATGCTGCTCTTTaGACACCATTTGGTCATTTG +
Preference number: 2 (lower is better)
Translates to: GQVAAAPNSRPALVKGKMCHAAL*TPFGHL
Trigger: CAAATGACCAAATGGTGTCCAAAGAGCAGCATGACA...CATTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp GTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACTGGTGTGGGCTCCCACTGTCATGCTGCTCTTTaGACACCATTTGGTCATTTG +
Preference number: 2 (lower is better)
Translates to: VQYRAAGFKSNLTGVGSHCHAAL*TPFGHL
Trigger: CAAATGACCAAATGGTGTCCAAAGAGCAGCATGACA...GTGGGAGCCCACACCAGTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR CCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCAAGATGTAACTACACCTaGAGTCAGTATGCTGAAAAA +
Preference number: 2 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPRCNYT*SQYAEK
Trigger: TTTTTCAGCATACTGACTCCAGGTGTAGTTACATCT...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGCAGAAGACCAAAAACTaGGATGCTGCATCTCCCTTC +
Preference number: 2 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKQKTKN*DAASPF
Trigger: GAAGGGAGATGCAGCATCCCAGTTTTTGGTCTTCTG...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR TCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACTCAGACTTTTTGGATaGGACAGATACTTCAGTTTG +
Preference number: 2 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLLRLFG*DRYFSL
Trigger: CAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGAG...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR-3UTR TCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAAAAGCCTGGCTCCACTaGGTTATCAACGGGTATTGT +
Preference number: 2 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLKAWLH*VINGYC
Trigger: ACAATACCCGTTGATAACTCAGTGGAGCCAGGCTTT...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp GAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCATCTATCAGTTATGGGCTAACTCGCATGGTACTGTaGATAGCACACCTTCTGCTT +
Preference number: 2 (lower is better)
Translates to: EGAPMRWLTSNASISYGLTRMVL*IAHLLL
Trigger: AAGCAGAAGGTGTGCTATTCACAGTACCATGCGAGT...TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGAGATATATAAAGGCTTaGTGGCCCAATGGCTCTCAG +
Preference number: 2 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKRYIKA*WPNGSQ
Trigger: CTGAGAGCCATTGGGCCATCAAGCCTTTATATATCT...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGTTTTTGCATGAACACTaGGGAAAGGCCCAAAGATCC +
Preference number: 2 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKFLHEH*GKAQRS
Trigger: GGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAA...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp AGTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCATGAGTGGAAACAACTaGGGCACACCCCATCCTTCC +
Preference number: 2 (lower is better)
Translates to: SVYDDTPPAAASWNITSFMSGNN*GTPHPS
Trigger: GGAAGGATGGGGTGTGCCTCAGTTGTTTCCACTCAT...GAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420906.6
3UTR-3UTR TCA 90 bp GTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCTGCCTCTGCCGTCTTTTaGGGAGTACTCTTCCCTATG +
Preference number: 2 (lower is better)
Translates to: VCTMIRHLQQHPGILHHSASAVF*GVLFPM
Trigger: CATAGGGAAGAGTACTCCTCAAAAGACGGCAGAGGC...AGAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR TCA 90 bp AGTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCTTCAATCTCCTCACCTaGAGCATCTGGGTGCTCAGC +
Preference number: 2 (lower is better)
Translates to: SVYDDTPPAAASWNITSFFNLLT*SIWVLS
Trigger: GCTGAGCACCCAGATGCTTCAGGTGAGGAGATTGAA...GAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR GCA 90 bp CCATCTGTAGTTCCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTGGGCTGTCCGAGACCTaGAGCAGCATCCTGGAATAT +
Preference number: 2 (lower is better)
Translates to: PSVVPKFHPNDILEVQLLGLSET*SSILEY
Trigger: ATATTCCAGGATGCTGCTGCAGGTCTCGGACAGCCC...AAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGGAACTACAGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353275.9
3UTR-3UTR GCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAAGGGCCACCCCTTCCGTaGAAAGCCCTGCTGCAGCTC +
Preference number: 2 (lower is better)
Translates to: STTSTIYSISNEMHLERKGPPLP*KALLQL
Trigger: GAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCC...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGCTGATGCCAATGTCATaGTGCTCTTTGGACACCATT +
Preference number: 2 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKLMPMS*CSLDTI
Trigger: AATGGTGTCCAAAGAGCAGCATGACATTGGCATCAG...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp TGTGCACTACCTGAAGATGCCACCCTATTACAATGGAGTACTTACGTTTTTAGACCCAGCTCACAGCCCTaGCATCACAGGTGCCACACA +
Preference number: 2 (lower is better)
Translates to: CALPEDATLLQWSTYVFRPSSQP*HHRCHT
Trigger: TGTGTGGCACCTGTGATGGCAGGGCTGTGAGCTGGG...TCTAAAAACGTAAGTACTCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp GACCTCTATTGCCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGACATCAGAGGAGCCTCTaGTGCCAAGGCAACCCTTTC +
Preference number: 2 (lower is better)
Translates to: DLYCQYVHYLKMPPYYNGHQRSL*CQGNPF
Trigger: GAAAGGGTTGCCTTGGCAGCAGAGGCTCCTCTGATG...TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTATCCCACAGGGAGTGTaGTGGGGAGGAGCCTGGTCT +
Preference number: 2 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTIPQGV*WGGAWS
Trigger: AGACCAGGCTCCTCCCCAGCACACTCCCTGTGGGAT...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp TGTGTCCTCAGCTTCAGCATCTTCTGTAGGGTCCTGTATCCTCTTTGTGTGGTTCTTGGTGTTGTAGCGTaGTCTCTGCTTCTCACTCAG +
Preference number: 2 (lower is better)
Translates to: CVLSFSIFCRVLYPLCVVLGVVA*SLLLTQ
Trigger: CTGAGTGAGAAGCAGAGAGCACGCTACAACACCAAG...AACCACACAAAGAGGATACAGGACCCTACAGAAGATGCTGAAGCTGAGGACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR CCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTATTGGGGGAACATTTTTaGGATGGCAAACTTCTGCCG +
Preference number: 2 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLLGEHF*DGKLLP
Trigger: CGGCAGAAGTTTGCCATCCCAAAAATGTTCCCCCAA...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGTTGGGGGAACATTTTTaGGATGGCAAACTTCTGCCG +
Preference number: 2 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLLGEHF*DGKLLP
Trigger: CGGCAGAAGTTTGCCATCCCAAAAATGTTCCCCCAA...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCATTGGTCTCTGGGTACTaGCGCTTGGTGAAGCACTGG +
Preference number: 2 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSLVSGY*RLVKHW
Trigger: CCAGTGCTTCACCAAGCGCCAGTACCCAGAGACCAA...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCAATCTACATTGACCACTaGAATATGAACGTGTTTCTA +
Preference number: 2 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPIYIDH*NMNVFL
Trigger: TAGAAACACGTTCATATTCCAGTGGTCAATGTAGAT...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp GACCTCTATTGCCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGACAATGCTGCCACACATaGGACTGTCCCTCTCACTGC +
Preference number: 2 (lower is better)
Translates to: DLYCQYVHYLKMPPYYNGQCCHT*DCPSHC
Trigger: GCAGTGAGAGGGACAGTCCCATGTGTGGCAGCATTG...TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp AATTTTTGCATGAACACTGAGGAAAGGCCCAAAGATCCATCTAGAGCAGGTGGGCCTCAAGTTTTACACTaGAGAGCCACCTCCCCTCTC +
Preference number: 2 (lower is better)
Translates to: NFCMNTEERPKDPSRAGGPQVLH*RATSPL
Trigger: GAGAGGGGAGGTGGCTCTCCAGTGTAAAACTTGAGG...CCCACCTGCTCTAGATGGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp TCTCGACCACCACTGAGTTGGTTTGAGTCCCTGCAGAAAATCCCACTCGGAGGACACACCTACGTTCTGTaGCTATTTGTTGTTTTTGGC +
Preference number: 2 (lower is better)
Translates to: SRPPLSWFESLQKIPLGGHTYVL*LFVVFG
Trigger: GCCAAAAACAACAAATAGCCACAGAACGTAGGTGTG...TCCTCCGAGTGGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR-3UTR CCA 90 bp CCCAATGGGTGTGTGTCAGTGTGGACCTCAAACAGCAATTCTCATGGTCACCTACACTCCTCTAATGAGTaGAAACAACTGAGGCACACC +
Preference number: 2 (lower is better)
Translates to: PNGCVSVWTSNSNSHGHLHSSNE*KQLRHT
Trigger: GGTGTGCCTCAGTTGTTTCCACTCATTAGAGGAGTG...TAGGTGACCATGAGAATTGCTGTTTGAGGTCCACACTGACACACACCCATTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420906.6
3UTR-3UTR CCA 90 bp GAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCATCTATCAGTTATGGGCTATATCCAAGCTCTTTCTaGGGCGTCACCAAAGAACTG +
Preference number: 2 (lower is better)
Translates to: EGAPMRWLTSNASISYGLYPSSF*GVTKEL
Trigger: CAGTTCTTTGGTGACGCCCCAGAAAGAGCTTGGATA...TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR CCA 90 bp TTCAGTGGTTTACATGCATCAGACAGATTTTTCGTTGCTGCCTGGCTCTTGAGCAGGAGGCTGCCTCCATaGCCTTGTAAGAGCTTGTTC +
Preference number: 2 (lower is better)
Translates to: FSGLHASDRFFVAAWLLSRRLPP*PCKSLF
Trigger: GAACAAGCTCTTACAAGGCCATGGAGGCAGCCTCCT...GCTCAAGAGCCAGGCAGCAACGAAAAATCTGTCTGATGCATGTAAACCACTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR TCA 90 bp AATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGGCACTTAGGGATTTCTaGAATATCCGCTGTGTAGAT +
Preference number: 2 (lower is better)
Translates to: NKVVLEDGHCTRRGLDVKALRDF*NIRCVD
Trigger: ATCTACACAGCGGATATTTCAGAAATCCCTAAGTGC...CTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGGAAAAGAAGCGTTTCTaGGGAACAATTCACATTAGT +
Preference number: 2 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWEKKRF*GTIHIS
Trigger: ACTAATGTGAATTGTTCCTCAGAAACGCTTCTTTTC...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp AAACCAGGAGATGGTCCTCTCGGAAAACTCCGCTCCTCTAGGATGAGCCCACTCTTGACCACTGGAATATaGACGTGTTTCTATTATGAG +
Preference number: 2 (lower is better)
Translates to: KPGDGPLGKLRSSRMSPLLTTGI*TCFYYE
Trigger: CTCATAATAGAAACACGTTCATATTCCAGTGGTCAA...GAGTGGGCTCATCCTAGAGGAGCGGAGTTTTCCGAGAGGACCATCTCCTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp GGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAATGTTGACCACTGGAATATaGACGTGTTTCTATTATGAG +
Preference number: 2 (lower is better)
Translates to: GQVAAAPNSRPALVKGKMLTTGI*TCFYYE
Trigger: CTCATAATAGAAACACGTTCATATTCCAGTGGTCAA...CATTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTCCCACTCCTGGCATCTaGAGTGGGACAATGCTGCCA +
Preference number: 2 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTPTPGI*SGTMLP
Trigger: TGGCAGCATTGTCCCACTTCAGATGCCAGGAGTGGG...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCCATTTAATTTTTGCATaGACACTGAGGAAAGGCCCA +
Preference number: 2 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSHLIFA*TLRKGP
Trigger: TGGGCCTTTCCTCAGTGTTCATGCAAAAATTAAATG...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAACGTGCAAAGCCCTGCTaGAGCTCTGGACAGCCCCCA +
Preference number: 2 (lower is better)
Translates to: STTSTIYSISNEMHLERKRAKPC*SSGQPP
Trigger: TGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACG...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp TTTTGCTTTCTCCATAATATAGAGGGAGCACCTATGCGCTGGCTGACTTCTAATGAAGTGGGACAATGCTaGCACACATGGGACTGTCCC +
Preference number: 2 (lower is better)
Translates to: FCFLHNIEGAPMRWLTSNEVGQC*HTWDCP
Trigger: GGGACAGTCCCATGTGTGGCAGCATTGTCCCACTTC...ATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTCTATATTATGGAGAAAGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAGGCCAGGTGGCTGCTaGTCCCAATTCAAGGCCTGC +
Preference number: 2 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGRPGGC*SQFKAC
Trigger: GCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCCT...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp GTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCTGTTGGTTTGAGTCCCTaGAGAAAATCCCACTCGGAG +
Preference number: 2 (lower is better)
Translates to: VCTMIRHLQQHPGILHHSVGLSP*RKSHSE
Trigger: CTCCGAGTGGGATTTTCTGCAGGGACTCAAACCAAC...AGAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420906.6
3UTR-3UTR CCA 90 bp CCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTCCCAGCCCTGCACTCGCTCAGACTTTTTaGATGAGACAGATACTTCAG +
Preference number: 2 (lower is better)
Translates to: PKFHPNDILEVQLLPSPALAQTF*MRQILQ
Trigger: CTGAAGTATCTGTCTCATCCAAAAAGTCTGAGCGAG...TGCAGGGCTGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR-3UTR CCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACAGGAATCCTGAGGGATTaGGGCGGTTTTTGTGTTTTG +
Preference number: 2 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTGILRD*GGFCVL
Trigger: CAAAACACAAAAACCGCCCCAATCCCTCAGGATTCC...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp GACCTCTATTGCCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGATGCATCTATCAGTTATaGGCTAGCTGGCTGGCCACC +
Preference number: 2 (lower is better)
Translates to: DLYCQYVHYLKMPPYYNGCIYQL*ASWLAT
Trigger: GGTGGCCAGCCAGCTAGCCCATAACTGATAGATGCA...TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp TCTGCCTTTCACGACATGAAAGGTTGTGTCATGAAACCTCGCTTAAGTTTCCTACAATGCTGCCACACATaGGACTGTCCCTCTCACTGC +
Preference number: 2 (lower is better)
Translates to: SAFHDMKGCVMKPRLSFLQCCHT*DCPSHC
Trigger: GCAGTGAGAGGGACAGTCCCATGTGTGGCAGCATTG...TAGGAAACTTAAGCGAGGTTTCATGACACAACCTTTCATGTCGTGAAAGGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTACCCTACTCCTCTTCTaGGGTCAGCCTCTGCCGTCT +
Preference number: 2 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTTLLLF*GQPLPS
Trigger: AGACGGCAGAGGCTGACCCCAGAAGAGGAGTAGGGT...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR TCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCACAAATTCTCCCTTTCTaGTGTCCCTCTTGGCGACCA +
Preference number: 2 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSQILPF*CPSWRP
Trigger: TGGTCGCCAAGAGGGACATCAGAAAGGGAGAATTTG...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp ATCCTGCAACATTTGAGCAGAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATCGGATTAAATGGCCTTaGTTAGTTATCTTACCTTGG +
Preference number: 2 (lower is better)
Translates to: ILQHLSRANRGTQPALSHRIKWP*LVILPW
Trigger: CCAAGGTAAGATAACTAATCAAGGCCATTTAATCCG...ATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTCTGCTCAAATGTTGCAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCTTGACCACTGGAATATaGACGTGTTTCTATTATGAG +
Preference number: 2 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSLTTGI*TCFYYE
Trigger: CTCATAATAGAAACACGTTCATATTCCAGTGGTCAA...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp GTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCTCACCTTCTGCTTTTATaGGCTGAAGGGCAAGTAAGC +
Preference number: 2 (lower is better)
Translates to: VCTMIRHLQQHPGILHHSHLLLL*AEGQVS
Trigger: GCTTACTTGCCCTTCAGCTCATAAAAGCAGAAGGTG...AGAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR TCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGTGGGTGACTGCTTATTaGACCAGAGCCATTTTTATA +
Preference number: 2 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKWVTAY*TRAIFI
Trigger: TATAAAAATGGCTCTGGTTCAATAAGCAGTCACCCA...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp AATTTTTGCATGAACACTGAGGAAAGGCCCAAAGATCCATCTAGAGCAGGTGGGCACCTATGCGCTGGCTaGCTTCTAATGCATCTATCA +
Preference number: 2 (lower is better)
Translates to: NFCMNTEERPKDPSRAGGHLCAG*LLMHLS
Trigger: TGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTG...CCCACCTGCTCTAGATGGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGACCCACTCCTGGCATCTaGAGTGGGACAATGCTGCCA +
Preference number: 2 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGPTPGI*SGTMLP
Trigger: TGGCAGCATTGTCCCACTTCAGATGCCAGGAGTGGG...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGACCCAGACGCAGTGACTaGTGTCAGCCATCAGAGGAG +
Preference number: 2 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGPRRSD*CQPSEE
Trigger: CTCCTCTGATGGCTGACATCAGTCACTGCGTCTGGG...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp ACAAATGTGGACCTAACACGTAACCATGGAGTTCAAAGGTATCCAACCAAAAAGCTGGGGGTGAGTCTCTaGGAACAGAGGAAGTCTCCA +
Preference number: 2 (lower is better)
Translates to: TNVDLTRNHGVQRYPTKKLGVSL*EQRKSP
Trigger: TGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAG...CTTTTTGGTTGGATACCTTTGAACTCCATGGTTACGTGTTAGGTCCACATTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGATGAAGTCGAAGGTTTaGCACACACGTCACAATGAT +
Preference number: 2 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLMKSKV*HTRHND
Trigger: ATCATTGTGACGTGTGTGGCAAACCTTCGACTTCAT...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR GCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCACTCCCCAAAGTGCACTaGAAAGCCGATTCTGCTGTT +
Preference number: 2 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSLPKVH*KADSAV
Trigger: AACAGCAGAATCGGCTTTGCAGTGCACTTTGGGGAG...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR GCA 90 bp AAACCAGGAGATGGTCCTCTCGGAAAACTCCGCTCCTCTAGGATGAGCCCACTCGAGGACCACTTTTCATaGCAAAGCAAAATTTATACT +
Preference number: 2 (lower is better)
Translates to: KPGDGPLGKLRSSRMSPLEDHFS*QSKIYT
Trigger: AGTATAAATTTTGCTTTGGCATGAAAAGTGGTCCTC...GAGTGGGCTCATCCTAGAGGAGCGGAGTTTTCCGAGAGGACCATCTCCTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGTATTTCATCCTCGCATaGATAATGCAGTCAAGAGGA +
Preference number: 2 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKYFILA*IMQSRG
Trigger: TCCTCTTGACTGCATTATGCATGCGAGGATGAAATA...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp AATTTTTGCATGAACACTGAGGAAAGGCCCAAAGATCCATCTAGAGCAGGTGGGCTGGCTGGCCACCCATaGAAAATTCATCATGCTGTA +
Preference number: 2 (lower is better)
Translates to: NFCMNTEERPKDPSRAGGLAGHP*KIHHAV
Trigger: TACAGCATGATGAATTTTGCATGGGTGGCCAGCCAG...CCCACCTGCTCTAGATGGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAAGTGAGGCCAGGTGGCTaGTGCTCCCAATTCAAGGCC +
Preference number: 2 (lower is better)
Translates to: STTSTIYSISNEMHLERKVRPGG*CSQFKA
Trigger: GGCCTTGAATTGGGAGCAGCAGCCACCTGGCCTCAC...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp TCTCGACCACCACTGAGTTGGTTTGAGTCCCTGCAGAAAATCCCACTCGGAGGATGGCCTTCATACCAATaGCATGGTTATCGTTATTAT +
Preference number: 2 (lower is better)
Translates to: SRPPLSWFESLQKIPLGGWPSYQ*HGYRYY
Trigger: ATAATAACGATAACCATGGCATTGGTATGAAGGCCA...TCCTCCGAGTGGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR-3UTR CCA 90 bp AAACAGTCATCAACTACACTCATAGGATCAAGATATTTGGCAACTGACAGTCATTGTACGTCTGTGTCCTaGCGGCTCGAGCTGGGTCCT +
Preference number: 2 (lower is better)
Translates to: KQSSTTLIGSRYLATDSHCTSVS*RLELGP
Trigger: AGGACCCAGCTCGAGCCGCCAGGACACAGACGTACA...ATGACTGTCAGTTGCCAAATATCTTGATCCTATGAGTGTAGTTGATGACTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACATTTAGGTGCAGATGCTaGTTTCGGATGCCAAGGAAT +
Preference number: 2 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTFRCRC*FRMPRN
Trigger: ATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAA...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCTACTATATGCCTGGATaGTCAGCATGCTTCAAAATA +
Preference number: 2 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSYYMPG*SACFKI
Trigger: TATTTTGAAGCATGCTGACCATCCAGGCATATAGTA...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR CAA 90 bp TGGCACACATACTCCTTTTTGGCAGTCACTCCTCGCTCAGACTTTTaGGATGAGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTTCG +
Preference number: 2 (lower is better)
Translates to: WHTYSFLAVTPRSDF*DETDTSVCVSSALS
Trigger: CGAAAGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGAGCGAGGAGTGACTGCCAAAAAGGAGTATGTGTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR CAA 90 bp TTCGGATGCCAAGGAATCCTGAGGGATTGGGGCGGTTTTTGTGTTTaGCTTCACATTAATGATGGAGGATTGAAGCTGATGTTCAGGAAG +
Preference number: 2 (lower is better)
Translates to: FGCQGILRDWGGFCV*LHINDGGLKLMFRK
Trigger: CTTCCTGAACATCAGCTTCAATCCTCCATCATTAATGTGAAGCAAAACACAAAAACCGCCCCAATCCCTCAGGATTCCTTGGCATCCGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR CAA 90 bp CATGTGCCCCTGGTTATTCAGCTGATGCCAATGTCATGCTGCTCTTaGGACACCATTTGGTCATTTGCAGGGTTTTGCTTTCTCCATAAT +
Preference number: 2 (lower is better)
Translates to: HVPLVIQLMPMSCCS*DTIWSFAGFCFLHN
Trigger: ATTATGGAGAAAGCAAAACCCTGCAAATGACCAAATGGTGTCCAAAGAGCAGCATGACATTGGCATCAGCTGAATAACCAGGGGCACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAGAAAAGTGCAGGGACTaGGCGGACACAGACTCTGTC +
Preference number: 2 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGEKCRD*ADTDSV
Trigger: GACAGAGTCTGTGTCCGCTCAGTCCCTGCACTTTTC...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAGCTAAACCCAAGAGCTaGAGATGCTGCCGTGGAAGC +
Preference number: 2 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGAKPKS*RCCRGS
Trigger: GCTTCCACGGCAGCATCTTCAGCTCTTGGGTTTAGC...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR GCA 90 bp TCCACTGAGTTATCAACGGGTATTGTAGAGACATTCAAAGTTAGTGTTACTTGCCCTTGGTGCAGAACTTaGGGTCACACAGCACCAGCT +
Preference number: 2 (lower is better)
Translates to: STELSTGIVETFKVSVTCPWCRT*GHTAPA
Trigger: AGCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGG...GCAAGTAACACTAACTTTGAATGTCTCTACAATACCCGTTGATAACTCAGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR GCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATGCTGTCCCGTCCTGGTaGTCCTTACAGAACGAATTG +
Preference number: 2 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNAVPSW*SLQNEL
Trigger: CAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGC...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR GCA 90 bp ACAAATGTGGACCTAACACGTAACCATGGAGTTCAAAGGTATCCAACCAAAAAGCTTACCATGCAAAAATaGGGACACCTGGGGCAGGAC +
Preference number: 2 (lower is better)
Translates to: TNVDLTRNHGVQRYPTKKLTMQK*GHLGQD
Trigger: GTCCTGCCCCAGGTGTCCGCATTTTTGCATGGTAAG...CTTTTTGGTTGGATACCTTTGAACTCCATGGTTACGTGTTAGGTCCACATTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp GAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCATCTATCAGTTATGGGCTATATTTCATCCTCGCATaGATAATGCAGTCAAGAGGA +
Preference number: 2 (lower is better)
Translates to: EGAPMRWLTSNASISYGLYFILA*IMQSRG
Trigger: TCCTCTTGACTGCATTATGCATGCGAGGATGAAATA...TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCAGAGTTCACTTGCCCCTaGCCACCTTCCCAATGTCCC +
Preference number: 2 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSEFTCP*PPSQCP
Trigger: GGGACATTGGGAAGGTGGGCAGGGGCAAGTGAACTC...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAGTGCTGAGTTCACTTaGCCCTGCCCACCTTCCCAA +
Preference number: 2 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGSAEFT*PCPPSQ
Trigger: TTGGGAAGGTGGGCAGGGGCAAGTGAACTCAGCACT...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp TGTGCACTACCTGAAGATGCCACCCTATTACAATGGAGTACTTACGTTTTTAGATTATACTGGCTTCCATaGCGGGACACAGAGGAGGAC +
Preference number: 2 (lower is better)
Translates to: CALPEDATLLQWSTYVFRLYWLP*RDTEED
Trigger: GTCCTCCTCTGTGTCCCGGCATGGAAGCCAGTATAA...TCTAAAAACGTAAGTACTCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGACTTTACAGCCCTCCATaGACGTCTCAGGCCCAGACG +
Preference number: 2 (lower is better)
Translates to: FLKILYAWMVSMLQNITRLYSPP*TSQAQT
Trigger: CGTCTGGGCCTGAGACGTGCATGGAGGGCTGTAAAG...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp AGTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCTGCTATCATGTACTCTaGAAGTCCAGAACACAGGAG +
Preference number: 2 (lower is better)
Translates to: SVYDDTPPAAASWNITSFCYHVL*KSRTQE
Trigger: CTCCTGTGTTCTGGACTTGCAGAGTACATGATAGCA...GAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACACT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420906.6
3UTR-3UTR GCA 90 bp ACAAATGTGGACCTAACACGTAACCATGGAGTTCAAAGGTATCCAACCAAAAAGACTCTCCAGGGTCTCTaGAGAGCTACACAGTTTGGC +
Preference number: 2 (lower is better)
Translates to: TNVDLTRNHGVQRYPTKKTLQGL*RATQFG
Trigger: GCCAAACTGTGTAGCTCTGCAGAGACCCTGGAGAGT...CTTTTTGGTTGGATACCTTTGAACTCCATGGTTACGTGTTAGGTCCACATTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR GCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGACCTGAAGCATCTGGGTaGTCAGCTACCACCTCATCC +
Preference number: 2 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGPEASG*SATTSS
Trigger: GGATGAGGTGGTAGCTGAGCACCCAGATGCTTCAGG...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR CCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATAAGGCTGTCCCGTCCTaGTGCTCCTTACAGAACGAA +
Preference number: 2 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNKAVPS*CSLQNE
Trigger: TTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTT...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACAAGCTTCTCACTAGGATaGAAAAGAAGCGTTTCTGAG +
Preference number: 2 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTSFSLG*KRSVSE
Trigger: CTCAGAAACGCTTCTTTTCCATCCTAGTGAGAAGCT...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp TCTGCCTTTCACGACATGAAAGGTTGTGTCATGAAACCTCGCTTAAGTTTCCTACTTGGTCCGGGGCCTTaGATCAAAAGGGTTAAATGG +
Preference number: 2 (lower is better)
Translates to: SAFHDMKGCVMKPRLSFLLGPGP*IKRVKW
Trigger: CCATTTAACCCTTTTGATCCAAGGCCCCGGACCAAG...TAGGAAACTTAAGCGAGGTTTCATGACACAACCTTTCATGTCGTGAAAGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGAAAAAATGCGGACACCTaGGGCAGGACACCAGGCTGC +
Preference number: 2 (lower is better)
Translates to: FLKILYAWMVSMLQNITRKNADT*GRTPGC
Trigger: GCAGCCTGGTGTCCTGCCCCAGGTGTCCGCATTTTT...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTTGCATCTATCAGTTATaGGCTAGCTGGCTGGCCACC +
Preference number: 2 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTCIYQL*ASWLAT
Trigger: GGTGGCCAGCCAGCTAGCCCATAACTGATAGATGCA...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGACAATGCTGCCACACATaGGACTGTCCCTCTCACTGC +
Preference number: 2 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGQCCHT*DCPSHC
Trigger: GCAGTGAGAGGGACAGTCCCATGTGTGGCAGCATTG...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTCTCACATCAGGCTTCTaGCAAGAGCCTTCTCAGGAG +
Preference number: 2 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTLTSGF*QEPSQE
Trigger: CTCCTGAGAAGGCTCTTGCCAGAAGCCTGATGTGAG...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp AGTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCGGCAGCAGCCCCAAATaGCTTTATTTTGCTATCATG +
Preference number: 2 (lower is better)
Translates to: SVYDDTPPAAASWNITSFGSSPK*LYFAIM
Trigger: CATGATAGCAAAATAAAGCCATTTGGGGCTGCTGCC...GAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420906.6
3UTR-3UTR CCA 90 bp TGCTCTATAGAAGCAACTGATGCAGAGGTTGGTGTACATAACCTGATTACAGTACAGAGCTACACAGTTTaGCCCTCCGCCTTCTCTTCA +
Preference number: 2 (lower is better)
Translates to: CSIEATDAEVGVHNLITVQSYTV*PSAFSS
Trigger: TGAAGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTG...TACTGTAATCAGGTTATGTACACCAACCTCTGCATCAGTTGCTTCTATAGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR CCA 90 bp TATTACATCATTCTAAGTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACTCCTGCTTCGTGGCATaGAGACTGTGGTCTTCTTCC +
Preference number: 2 (lower is better)
Translates to: YYIILSAVQSSWVQIQLDSCFVA*RLWSSS
Trigger: GGAAGAAGACCACAGTCTCCATGCCACGAAGCAGGA...GTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCACTTAGAATGATGTAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR TCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAAACTGAGTGTGTACGATaGTACGCCACCTGCAGCAGC +
Preference number: 2 (lower is better)
Translates to: STTSTIYSISNEMHLERKTECVR*YATCSS
Trigger: GCTGCTGCAGGTGGCGTATCATCGTACACACTCAGT...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATAAGGCTTATTCACCTTaGTGTGCTTGTATGGTGGGG +
Preference number: 2 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHKAYSP*CACMVG
Trigger: CCCCACCATACAAGCACATCAAGGTGAATAAGCCTT...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGTCGGTGGTGATTTGTaGAATAGGTTTAGCAAAAAT +
Preference number: 2 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLVGGDL*NRFSKN
Trigger: ATTTTTGCTAAACCTATTTCACAAATCACCACCGAC...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp TGTGTCCTCAGCTTCAGCATCTTCTGTAGGGTCCTGTATCCTCTTTGTGTGGTTCGGATTAAATGGCCTTaGTTAGTTATCTTACCTTGG +
Preference number: 2 (lower is better)
Translates to: CVLSFSIFCRVLYPLCVVRIKWP*LVILPW
Trigger: CCAAGGTAAGATAACTAATCAAGGCCATTTAATCCG...AACCACACAAAGAGGATACAGGACCCTACAGAAGATGCTGAAGCTGAGGACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR TCA 90 bp GTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCTATGAAACATGAGGGCTaGTGCTCTATAGAAGCAACT +
Preference number: 2 (lower is better)
Translates to: VCTMIRHLQQHPGILHHSMKHEG*CSIEAT
Trigger: AGTTGCTTCTATAGAGCATCAGCCCTCATGTTTCAT...AGAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR TCA 90 bp GACCTCTATTGCCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGACCGACATTAAGACAATaGAACATGAGGGCTGATGCT +
Preference number: 2 (lower is better)
Translates to: DLYCQYVHYLKMPPYYNGPTLRQ*NMRADA
Trigger: AGCATCAGCCCTCATGTTTCATTGTCTTAATGTCGG...TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp AATTTTTGCATGAACACTGAGGAAAGGCCCAAAGATCCATCTAGAGCAGGTGGGAGTCTTTACTTTGGGTaGCTGCTTATTGAACCAGAG +
Preference number: 2 (lower is better)
Translates to: NFCMNTEERPKDPSRAGGSLYFG*LLIEPE
Trigger: CTCTGGTTCAATAAGCAGTCACCCAAAGTAAAGACT...CCCACCTGCTCTAGATGGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp GGACTTTTCAAGATGATATTACCAAACATAACGGAACCTAGTGAACACATTCCACGTGCACTCTTTTTCTaGCCTCTGGGGAGGAGAGAG +
Preference number: 2 (lower is better)
Translates to: GLFKMILPNITEPSEHIPRALFF*PLGRRE
Trigger: CTCTCTCCTCCCCAGAGGTCAGAAAAAGAGTGCACG...TGGAATGTGTTCACTAGGTTCCGTTATGTTTGGTAATATCATCTTGAAAAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR GCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCATTCTGTAAACTTCTCTaGAAGATGGATGTGTCCCCC +
Preference number: 2 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSFCKLL*KMDVSP
Trigger: GGGGGACACATCCATCTTGCAGAGAAGTTTACAGAA...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR GCA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCGGCAGGACACCAGGCTaGTCCCCGACATTAAGACAA +
Preference number: 2 (lower is better)
Translates to: TGNSNVLRLECITIILRFGRTPG*SPTLRQ
Trigger: TTGTCTTAATGTCGGGGAGCAGCCTGGTGTCCTGCC...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp TTTTGCTTTCTCCATAATATAGAGGGAGCACCTATGCGCTGGCTGACTTCTAATCTGGCTGGCCACCCATaGAAAATTCATCATGCTGTA +
Preference number: 2 (lower is better)
Translates to: FCFLHNIEGAPMRWLTSNLAGHP*KIHHAV
Trigger: TACAGCATGATGAATTTTGCATGGGTGGCCAGCCAG...ATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTCTATATTATGGAGAAAGCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAAAGTGCTGAGTTCACTTaGCCCTGCCCACCTTCCCAA +
Preference number: 2 (lower is better)
Translates to: STTSTIYSISNEMHLERKSAEFT*PCPPSQ
Trigger: TTGGGAAGGTGGGCAGGGGCAAGTGAACTCAGCACT...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCAGTGCTGAGTTCACTTaGCCCTGCCCACCTTCCCAA +
Preference number: 2 (lower is better)
Translates to: TGNSNVLRLECITIILRFSAEFT*PCPPSQ
Trigger: TTGGGAAGGTGGGCAGGGGCAAGTGAACTCAGCACT...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTGACTGTCCCTCTCACTaGAGAGTGCTGAGTTCACTT +
Preference number: 2 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTDCPSH*RVLSSL
Trigger: AAGTGAACTCAGCACTCTGCAGTGAGAGGGACAGTC...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp TATTACATCATTCTAAGTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACGCTCAACTGACACTGTaGCCTTTCAGAACCAACGCA +
Preference number: 2 (lower is better)
Translates to: YYIILSAVQSSWVQIQLDAQLTL*PFRTNA
Trigger: TGCGTTGGTTCTGAAAGGGCACAGTGTCAGTTGAGC...GTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCACTTAGAATGATGTAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420906.6
3UTR-3UTR CCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTATTTCTTAGGACACTTTaGGAGAAGTTAGAGTCTGAA +
Preference number: 2 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLFLRTL*EKLESE
Trigger: TTCAGACTCTAACTTCTCCCAAAGTGTCCTAAGAAA...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGATCTACATTGACCACTaGAATATGAACGTGTTTCTA +
Preference number: 2 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKIYIDH*NMNVFL
Trigger: TAGAAACACGTTCATATTCCAGTGGTCAATGTAGAT...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTATTACAGTATCCCCTTaGTCCGGGGCCTTGGATCAA +
Preference number: 2 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTITVSP*SGALDQ
Trigger: TTGATCCAAGGCCCCGGACCAAGGGGATACTGTAAT...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp ACAAATGTGGACCTAACACGTAACCATGGAGTTCAAAGGTATCCAACCAAAAAGATTACAGTATCCCCTTaGTCCGGGGCCTTGGATCAA +
Preference number: 2 (lower is better)
Translates to: TNVDLTRNHGVQRYPTKKITVSP*SGALDQ
Trigger: TTGATCCAAGGCCCCGGACCAAGGGGATACTGTAAT...CTTTTTGGTTGGATACCTTTGAACTCCATGGTTACGTGTTAGGTCCACATTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTTCCTGGCATCTGAAGTaGGACAATGCTGCCACACAT +
Preference number: 2 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTSWHLK*DNAATH
Trigger: ATGTGTGGCAGCATTGTCCCACTTCAGATGCCAGGA...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGACTCACATCAGGCTTCTaGCAAGAGCCTTCTCAGGAG +
Preference number: 2 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGLTSGF*QEPSQE
Trigger: CTCCTGAGAAGGCTCTTGCCAGAAGCCTGATGTGAG...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp TCTGCCTTTCACGACATGAAAGGTTGTGTCATGAAACCTCGCTTAAGTTTCCTACCGACATTAAGACAATaGAACATGAGGGCTGATGCT +
Preference number: 2 (lower is better)
Translates to: SAFHDMKGCVMKPRLSFLPTLRQ*NMRADA
Trigger: AGCATCAGCCCTCATGTTTCATTGTCTTAATGTCGG...TAGGAAACTTAAGCGAGGTTTCATGACACAACCTTTCATGTCGTGAAAGGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAAATCCAACCAAAAAGATaGGGCCTGTCGGGCTGTTGG +
Preference number: 2 (lower is better)
Translates to: STTSTIYSISNEMHLERKIQPKR*GLSGCW
Trigger: CCAACAGCCCGACAGGCCTCATCTTTTTGGTTGGAT...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp GGACTTTTCAAGATGATATTACCAAACATAACGGAACCTAGTGAACACATTCCAAGATGCCACCTTCTGTaGCTGCAAAGCGCTCACCTA +
Preference number: 2 (lower is better)
Translates to: GLFKMILPNITEPSEHIPRCHLL*LQSAHL
Trigger: TAGGTGAGCGCTTTGCAGTCACAGAAGGTGGCATCT...TGGAATGTGTTCACTAGGTTCCGTTATGTTTGGTAATATCATCTTGAAAAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp AGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGAAGGGACCCATGTCTACAATaGGAAAAACAGCATCACGGA +
Preference number: 2 (lower is better)
Translates to: RNMMHTMGSMHHLQNVGRDPCLQ*EKQHHG
Trigger: TCCGTGATGCTGTTTTTCTCATTGTAGACATGGGTC...CCTTCCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR-3UTR TCA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCAGACTCCACTGTGACCTaGGCAGCTCTTCAATCTCCT +
Preference number: 2 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSDSTVT*AALQSP
Trigger: AGGAGATTGAAGAGCTGCTCAGGTCACAGTGGAGTC...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR GCA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATAGTTTGTGTTTCGTCTaGACTTTCGTATGGGGACTC +
Preference number: 2 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHSLCFV*TFVWGL
Trigger: GAGTCCCCATACGAAAGTGCAGACGAAACACAAACT...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR-3UTR GCA 90 bp TGTGCACTACCTGAAGATGCCACCCTATTACAATGGAGTACTTACGTTTTTAGAGCCTTTTCCTTACCATaGAAAAATGCGGACACCTGG +
Preference number: 2 (lower is better)
Translates to: CALPEDATLLQWSTYVFRAFSLP*KNADTW
Trigger: CCAGGTGTCCGCATTTTTGCATGGTAAGGAAAAGGC...TCTAAAAACGTAAGTACTCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTGCCTTTTCCTTACCATaGAAAAATGCGGACACCTGG +
Preference number: 2 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTAFSLP*KNADTW
Trigger: CCAGGTGTCCGCATTTTTGCATGGTAAGGAAAAGGC...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp TTTTGCTTTCTCCATAATATAGAGGGAGCACCTATGCGCTGGCTGACTTCTAATCTGATGCCAATGTCATaGTGCTCTTTGGACACCATT +
Preference number: 2 (lower is better)
Translates to: FCFLHNIEGAPMRWLTSNLMPMS*CSLDTI
Trigger: AATGGTGTCCAAAGAGCAGCATGACATTGGCATCAG...ATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTCTATATTATGGAGAAAGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAACCTGTCCAAGGACTCTaGACATCACACACAGTCACC +
Preference number: 2 (lower is better)
Translates to: STTSTIYSISNEMHLERKPVQGL*TSHTVT
Trigger: GGTGACTGTGTGTGATGTGCAGAGTCCTTGGACAGG...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGATCCTTTCCTGTGGTGTaGTCAGCTCTTAACGTCTCC +
Preference number: 2 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGSFPVV*SALNVS
Trigger: GGAGACGTTAAGAGCTGAGCACACCACAGGAAAGGA...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCACAGGAAACCAGGAGATaGTCCTCTCGGAAAACTCCG +
Preference number: 2 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSQETRR*SSRKTP
Trigger: CGGAGTTTTCCGAGAGGACCATCTCCTGGTTTCCTG...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGATTTTTCGTTGCTGCCTaGCTCTTGAGCGAGGAGGCT +
Preference number: 2 (lower is better)
Translates to: FLKILYAWMVSMLQNITRFFVAA*LLSEEA
Trigger: AGCCTCCTCGCTCAAGAGCCAGGCAGCAACGAAAAA...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR TCA 90 bp TTTTGCTTTCTCCATAATATAGAGGGAGCACCTATGCGCTGGCTGACTTCTAATTCTGCTTTTATGAGCTaGAGGGCAAGTAAGCCTTTT +
Preference number: 2 (lower is better)
Translates to: FCFLHNIEGAPMRWLTSNSAFMS*RASKPF
Trigger: AAAAGGCTTACTTGCCCTTCAGCTCATAAAAGCAGA...ATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTCTATATTATGGAGAAAGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp TGTGCACTACCTGAAGATGCCACCCTATTACAATGGAGTACTTACGTTTTTAGATACTCAAGACAGCACTaGGATGTAACTACACCTGGA +
Preference number: 2 (lower is better)
Translates to: CALPEDATLLQWSTYVFRYSRQH*DVTTPG
Trigger: TCCAGGTGTAGTTACATCTCAGTGCTGTCTTGAGTA...TCTAAAAACGTAAGTACTCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp GGACTTTTCAAGATGATATTACCAAACATAACGGAACCTAGTGAACACATTCCAACGTCTCCAGCTACATaGGACTCTCCAAATGCCCAT +
Preference number: 2 (lower is better)
Translates to: GLFKMILPNITEPSEHIPTSPAT*DSPNAH
Trigger: ATGGGCATTTGGAGAGTCTCATGTAGCTGGAGACGT...TGGAATGTGTTCACTAGGTTCCGTTATGTTTGGTAATATCATCTTGAAAAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp TATAAGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGTGCGCTTATGAAGTCTaGGCATTACTCACACTGCAG +
Preference number: 2 (lower is better)
Translates to: YKEHDAHYGIYASPSKCRCAYEV*ALLTLQ
Trigger: CTGCAGTGTGAGTAATGCTCAGACTTCATAAGCGCA...CCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR-3UTR GCA 90 bp TTTTGCTTTCTCCATAATATAGAGGGAGCACCTATGCGCTGGCTGACTTCTAATCACCATTTGGTCATTTaGAGGGTTTTGCTTTCTCCA +
Preference number: 2 (lower is better)
Translates to: FCFLHNIEGAPMRWLTSNHHLVI*RVLLSP
Trigger: TGGAGAAAGCAAAACCCTGCAAATGACCAAATGGTG...ATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTCTATATTATGGAGAAAGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp GGACTTTTCAAGATGATATTACCAAACATAACGGAACCTAGTGAACACATTCCAAGGCTGTGCACTGTCTaGGAAGGACTTGAGGACAAT +
Preference number: 2 (lower is better)
Translates to: GLFKMILPNITEPSEHIPRLCTV*EGLEDN
Trigger: ATTGTCCTCAAGTCCTTCGCAGACAGTGCACAGCCT...TGGAATGTGTTCACTAGGTTCCGTTATGTTTGGTAATATCATCTTGAAAAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp AACAGCAATTCTCATGGTCACCTAACTCATATCAGAATCGGGCCCAGCAGTCAATGGCCTTCATACCAATaGCATGGTTATCGTTATTAT +
Preference number: 2 (lower is better)
Translates to: NSNSHGHLTHIRIGPSSQWPSYQ*HGYRYY
Trigger: ATAATAACGATAACCATGGCATTGGTATGAAGGCCA...TTGACTGCTGGGCCCGATTCTGATATGAGTTAGGTGACCATGAGAATTGCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420906.6
3UTR-3UTR GCA 90 bp AGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGAAGGGCTACACTGGCCTCATaGATTACTCTAAATCAAAGC +
Preference number: 2 (lower is better)
Translates to: RNMMHTMGSMHHLQNVGRATLAS*ITLNQS
Trigger: GCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGC...CCTTCCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
3UTR-3UTR GCA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGAAAGACTCTGCAGCAATaGCAGCCTCCTTGGCTACTT +
Preference number: 2 (lower is better)
Translates to: FLKILYAWMVSMLQNITRKTLQQ*QPPWLL
Trigger: AAGTAGCCAAGGAGGCTGGCATTGCTGCAGAGTCTT...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR CCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATGAGAGTAGTTTCCTTTaGGGCCAGCGTCTATTATAC +
Preference number: 2 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNESSFL*GQRLLY
Trigger: GTATAATAGACGCTGGCCCCAAAGGAAACTACTCTC...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CCA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCATATGGGCTAGCTGGCTaGCCACCCATGCAAAATTCA +
Preference number: 2 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSYGLAG*PPMQNS
Trigger: TGAATTTTGCATGGGTGGCCAGCCAGCTAGCCCATA...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCAGGAGCACCTATGCGCTaGCTGACTTCTAATGCATCT +
Preference number: 2 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSGAPMR*LTSNAS
Trigger: AGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCC...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp TTTTGCTTTCTCCATAATATAGAGGGAGCACCTATGCGCTGGCTGACTTCTAATTCTTTGGACACCATTTaGTCATTTGCAGGGTTTTGC +
Preference number: 2 (lower is better)
Translates to: FCFLHNIEGAPMRWLTSNSLDTI*SFAGFC
Trigger: GCAAAACCCTGCAAATGACCAAATGGTGTCCAAAGA...ATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTCTATATTATGGAGAAAGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCATCCTGGCATCTGAAGTaGGACAATGCTGCCACACAT +
Preference number: 2 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSSWHLK*DNAATH
Trigger: ATGTGTGGCAGCATTGTCCCACTTCAGATGCCAGGA...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGACAAATCCAACTTGACTaGTGTGGGCTCCCACAAAAG +
Preference number: 2 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGQIQLD*CGLPQK
Trigger: CTTTTGTGGGAGCCCACACCAGTCAAGTTGGATTTG...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR CCA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCATCTTTTTCTGACCTCTaGGGAGGAGAGAGGAAGGCA +
Preference number: 2 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSSFSDL*GGERKA
Trigger: TGCCTTCCTCTCTCCTCCCCAGAGGTCAGAAAAAGA...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR CCA 90 bp GACCTCTATTGCCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGAATTTCGCTTCTTCAGTaGTTTACATGCATCAGACAG +
Preference number: 2 (lower is better)
Translates to: DLYCQYVHYLKMPPYYNGISLLQ*FTCIRQ
Trigger: CTGTCTGATGCATGTAAACCACTGAAGAAGCGAAAT...TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR TCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCAGTCGGTGGTGATTTGTaGAATAGGTTTAGCAAAAAT +
Preference number: 2 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSVGGDL*NRFSKN
Trigger: ATTTTTGCTAAACCTATTTCACAAATCACCACCGAC...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR TCA 90 bp ACAAATGTGGACCTAACACGTAACCATGGAGTTCAAAGGTATCCAACCAAAAAGGGAATGCAGTCTCCTTaGTCTATTACAGGGACTTTT +
Preference number: 2 (lower is better)
Translates to: TNVDLTRNHGVQRYPTKKGMQSP*SITGTF
Trigger: AAAAGTCCCTGTAATAGATCAAGGAGACTGCATTCC...CTTTTTGGTTGGATACCTTTGAACTCCATGGTTACGTGTTAGGTCCACATTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp CTCCTCATAAACATGACAAAAACAGGACCCATGTCTACAATGAGAAAAACAGCAATATGTCAGCTCAACTaGCACTGTGCCCTTTCAGAA +
Preference number: 2 (lower is better)
Translates to: LLINMTKTGPMSTMRKTAICQLN*HCALSE
Trigger: TTCTGAAAGGGCACAGTGTCAGTTGAGCTGACATAT...TGCTGTTTTTCTCATTGTAGACATGGGTCCTGTTTTTGTCATGTTTATGAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR-3UTR TCA 90 bp AGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGAAGGAGCCTTCGATATACATaGCTTAGGATCAGGAATAAC +
Preference number: 2 (lower is better)
Translates to: RNMMHTMGSMHHLQNVGRSLRYT*LRIRNN
Trigger: GTTATTCCTGATCCTAAGTCATGTATATCGAAGGCT...CCTTCCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
3UTR-3UTR GCA 90 bp AATTTTTGCATGAACACTGAGGAAAGGCCCAAAGATCCATCTAGAGCAGGTGGGCCTAAGCATCTTACATaGGTTACATTACTTAATGGT +
Preference number: 2 (lower is better)
Translates to: NFCMNTEERPKDPSRAGGPKHLT*VTLLNG
Trigger: ACCATTAAGTAATGTAACGCATGTAAGATGCTTAGG...CCCACCTGCTCTAGATGGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp GTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCTCCTAAGCATCTTACATaGGTTACATTACTTAATGGT +
Preference number: 2 (lower is better)
Translates to: VCTMIRHLQQHPGILHHSPKHLT*VTLLNG
Trigger: ACCATTAAGTAATGTAACGCATGTAAGATGCTTAGG...AGAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACAC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR GCA 90 bp TTTTGCTTTCTCCATAATATAGAGGGAGCACCTATGCGCTGGCTGACTTCTAATTATTTCATCCTCGCATaGATAATGCAGTCAAGAGGA +
Preference number: 2 (lower is better)
Translates to: FCFLHNIEGAPMRWLTSNYFILA*IMQSRG
Trigger: TCCTCTTGACTGCATTATGCATGCGAGGATGAAATA...ATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTCTATATTATGGAGAAAGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp TCTGCCTTTCACGACATGAAAGGTTGTGTCATGAAACCTCGCTTAAGTTTCCTATTTACTTTGGGTGACTaGTTATTGAACCAGAGCCAT +
Preference number: 2 (lower is better)
Translates to: SAFHDMKGCVMKPRLSFLFTLGD*LLNQSH
Trigger: ATGGCTCTGGTTCAATAAGCAGTCACCCAAAGTAAA...TAGGAAACTTAAGCGAGGTTTCATGACACAACCTTTCATGTCGTGAAAGGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp TCTGCCTTTCACGACATGAAAGGTTGTGTCATGAAACCTCGCTTAAGTTTCCTATTCACCTCTAGTGAATaGCTCAAGTTTTACACTGGA +
Preference number: 2 (lower is better)
Translates to: SAFHDMKGCVMKPRLSFLFTSSE*LKFYTG
Trigger: TCCAGTGTAAAACTTGAGGCATTCACTAGAGGTGAA...TAGGAAACTTAAGCGAGGTTTCATGACACAACCTTTCATGTCGTGAAAGGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGAGTCCCAAAGGAAGCATaGTCCTTGCTCATCCAGTAT +
Preference number: 2 (lower is better)
Translates to: FLKILYAWMVSMLQNITRVPKEA*SLLIQY
Trigger: ATACTGGATGAGCAAGGAGCATGCTTCCTTTGGGAC...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGACTTCAGGGCAGGGAATaGAGTCTCCTTGATCTATTA +
Preference number: 2 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGLQGRE*SLLDLL
Trigger: TAATAGATCAAGGAGACTGCATTCCCTGCCCTGAAG...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATCTCGCTCAGACTTTTTaGATGAGACAGATACTTCAG +
Preference number: 2 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNLAQTF*MRQILQ
Trigger: CTGAAGTATCTGTCTCATCCAAAAAGTCTGAGCGAG...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR-3UTR CCA 90 bp GGACTTTTCAAGATGATATTACCAAACATAACGGAACCTAGTGAACACATTCCACTCTTGGCAAGCCAATaGTCCTCCCTAAGTTCTTTC +
Preference number: 2 (lower is better)
Translates to: GLFKMILPNITEPSEHIPLLASQ*SSLSSF
Trigger: GAAAGAACTTAGGGAGGACCATTGGCTTGCCAAGAG...TGGAATGTGTTCACTAGGTTCCGTTATGTTTGGTAATATCATCTTGAAAAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCGAATTTCTGTACTCTTaGCAAGCCAATGGTCCTCCC +
Preference number: 2 (lower is better)
Translates to: TGNSNVLRLECITIILRFEFLYS*QANGPP
Trigger: GGGAGGACCATTGGCTTGCCAAGAGTACAGAAATTC...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp GGACTTTTCAAGATGATATTACCAAACATAACGGAACCTAGTGAACACATTCCATGGAAATGCTTATACTaGCTTCCATGCCGGGACACA +
Preference number: 2 (lower is better)
Translates to: GLFKMILPNITEPSEHIPWKCLY*LPCRDT
Trigger: TGTGTCCCGGCATGGAAGCCAGTATAAGCATTTCCA...TGGAATGTGTTCACTAGGTTCCGTTATGTTTGGTAATATCATCTTGAAAAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp AGTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCACAGGCATTCAGCATTaGAAACATCACAAACATTTA +
Preference number: 2 (lower is better)
Translates to: SVYDDTPPAAASWNITSFTGIQH*KHHKHL
Trigger: TAAATGTTTGTGATGTTTCCAATGCTGAATGCCTGT...GAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420906.6
3UTR-3UTR CCA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCATCCGCCTTCTCTTCATaGGAATGCACTCTTCTCTCA +
Preference number: 2 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSSAFSS*ECTLLS
Trigger: TGAGAGAAGAGTGCATTCCCATGAAGAGAAGGCGGA...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR CAA 90 bp GGAGAGACACCCTGCTGTAAGAATGTCCCAAAGGAAGCATGCTCCTaGCTCATCCAGTATAGGAATCAGATGAATATAATACAAATAATT +
Preference number: 2 (lower is better)
Translates to: GETPCCKNVPKEACS*LIQYRNQMNIIQII
Trigger: AATTATTTGTATTATATTCATCTGATTCCTATACTGGATGAGCAAGGAGCATGCTTCCTTTGGGACATTCTTACAGCAGGGTGTCTCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp TGCTCTATAGAAGCAACTGATGCAGAGGTTGGTGTACATAACCTGATTACAGTACGGATTAAATGGCCTTaGTTAGTTATCTTACCTTGG +
Preference number: 2 (lower is better)
Translates to: CSIEATDAEVGVHNLITVRIKWP*LVILPW
Trigger: CCAAGGTAAGATAACTAATCAAGGCCATTTAATCCG...TACTGTAATCAGGTTATGTACACCAACCTCTGCATCAGTTGCTTCTATAGAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGATTGGTGTACATAACCTaGTTACAGTATCCCCTTGGT +
Preference number: 2 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGLVYIT*LQYPLG
Trigger: ACCAAGGGGATACTGTAATCAGGTTATGTACACCAA...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAACTCTATAGAAGCAACTaGTGCAGAGGTTGGTGTACA +
Preference number: 2 (lower is better)
Translates to: STTSTIYSISNEMHLERKLYRSN*CRGWCT
Trigger: TGTACACCAACCTCTGCATCAGTTGCTTCTATAGAG...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCCCGACATTAAGACAATaGAACATGAGGGCTGATGCT +
Preference number: 2 (lower is better)
Translates to: TGNSNVLRLECITIILRFPTLRQ*NMRADA
Trigger: AGCATCAGCCCTCATGTTTCATTGTCTTAATGTCGG...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGATCTGCTTTTATGAGCTaGAGGGCAAGTAAGCCTTTT +
Preference number: 2 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGSAFMS*RASKPF
Trigger: AAAAGGCTTACTTGCCCTTCAGCTCATAAAAGCAGA...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCAAGATATATAAAGGCTTaGTGGCCCAATGGCTCTCAG +
Preference number: 2 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSRYIKA*WPNGSQ
Trigger: CTGAGAGCCATTGGGCCATCAAGCCTTTATATATCT...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp TGTGCACTACCTGAAGATGCCACCCTATTACAATGGAGTACTTACGTTTTTAGACATTTAATTTTTGCATaGACACTGAGGAAAGGCCCA +
Preference number: 2 (lower is better)
Translates to: CALPEDATLLQWSTYVFRHLIFA*TLRKGP
Trigger: TGGGCCTTTCCTCAGTGTTCATGCAAAAATTAAATG...TCTAAAAACGTAAGTACTCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGATCCCTCATTTGGAAATaGTTATACTGGCTTCCATGC +
Preference number: 2 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGSLIWK*LYWLPC
Trigger: GCATGGAAGCCAGTATAAGCATTTCCAAATGAGGGA...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGAAGGAAGCATGCTCCTTaGTCATCCAGTATAGGAATC +
Preference number: 2 (lower is better)
Translates to: FLKILYAWMVSMLQNITRRKHAP*SSSIGI
Trigger: GATTCCTATACTGGATGAGCAAGGAGCATGCTTCCT...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp TTTTGCTTTCTCCATAATATAGAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCCACCCTATTACAATaGAGTACTTACGTTTTTAGA +
Preference number: 2 (lower is better)
Translates to: FCFLHNIEGAPMRWLTSNATLLQ*STYVFR
Trigger: TCTAAAAACGTAAGTACTCCATTGTAATAGGGTGGC...ATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTCTATATTATGGAGAAAGCAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp AAACAGTCATCAACTACACTCATAGGATCAAGATATTTGGCAACTGACAGTCATGCACTTAGGGATTTCTaGAATATCCGCTGTGTAGAT +
Preference number: 2 (lower is better)
Translates to: KQSSTTLIGSRYLATDSHALRDF*NIRCVD
Trigger: ATCTACACAGCGGATATTTCAGAAATCCCTAAGTGC...ATGACTGTCAGTTGCCAAATATCTTGATCCTATGAGTGTAGTTGATGACTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR TCA 90 bp GGACTTTTCAAGATGATATTACCAAACATAACGGAACCTAGTGAACACATTCCATTGGTGTACATAACCTaGTTACAGTATCCCCTTGGT +
Preference number: 2 (lower is better)
Translates to: GLFKMILPNITEPSEHIPLVYIT*LQYPLG
Trigger: ACCAAGGGGATACTGTAATCAGGTTATGTACACCAA...TGGAATGTGTTCACTAGGTTCCGTTATGTTTGGTAATATCATCTTGAAAAGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAATTGGTGTACATAACCTaGTTACAGTATCCCCTTGGT +
Preference number: 2 (lower is better)
Translates to: STTSTIYSISNEMHLERKLVYIT*LQYPLG
Trigger: ACCAAGGGGATACTGTAATCAGGTTATGTACACCAA...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGATCTGCTTTTATGAGCTaGAGGGCAAGTAAGCCTTTT +
Preference number: 2 (lower is better)
Translates to: FLKILYAWMVSMLQNITRSAFMS*RASKPF
Trigger: AAAAGGCTTACTTGCCCTTCAGCTCATAAAAGCAGA...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCAGTCTTTACTTTGGGTaGCTGCTTATTGAACCAGAG +
Preference number: 2 (lower is better)
Translates to: TGNSNVLRLECITIILRFSLYFG*LLIEPE
Trigger: CTCTGGTTCAATAAGCAGTCACCCAAAGTAAAGACT...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAAAATATGTGCACTACCTaGAGATGCCACCCTATTACA +
Preference number: 2 (lower is better)
Translates to: STTSTIYSISNEMHLERKNMCTT*RCHPIT
Trigger: TGTAATAGGGTGGCATCTTCAGGTAGTGCACATATT...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR TCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAAGGAATGCAGTCTCCTTaGTCTATTACAGGGACTTTT +
Preference number: 2 (lower is better)
Translates to: STTSTIYSISNEMHLERKGMQSP*SITGTF
Trigger: AAAAGTCCCTGTAATAGATCAAGGAGACTGCATTCC...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp TTTTGCTTTCTCCATAATATAGAGGGAGCACCTATGCGCTGGCTGACTTCTAATGAGGACCACTTTTCATaGCAAAGCAAAATTTATACT +
Preference number: 2 (lower is better)
Translates to: FCFLHNIEGAPMRWLTSNEDHFS*QSKIYT
Trigger: AGTATAAATTTTGCTTTGGCATGAAAAGTGGTCCTC...ATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTCTATATTATGGAGAAAGCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAAATTCAGGACCTCTATTaGCAATATGTGCACTACCTG +
Preference number: 2 (lower is better)
Translates to: STTSTIYSISNEMHLERKIQDLY*QYVHYL
Trigger: CAGGTAGTGCACATATTGGCAATAGAGGTCCTGAAT...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp TATTACATCATTCTAAGTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACCTTCAGTGGTTTACATaGATCAGACAGATTTTTCGT +
Preference number: 2 (lower is better)
Translates to: YYIILSAVQSSWVQIQLDLQWFT*IRQIFR
Trigger: ACGAAAAATCTGTCTGATGCATGTAAACCACTGAAG...GTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCACTTAGAATGATGTAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR GCA 90 bp ACAAATGTGGACCTAACACGTAACCATGGAGTTCAAAGGTATCCAACCAAAAAGCCTAAGCATCTTACATaGGTTACATTACTTAATGGT +
Preference number: 2 (lower is better)
Translates to: TNVDLTRNHGVQRYPTKKPKHLT*VTLLNG
Trigger: ACCATTAAGTAATGTAACGCATGTAAGATGCTTAGG...CTTTTTGGTTGGATACCTTTGAACTCCATGGTTACGTGTTAGGTCCACATTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR GCA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCATTTACTTTGGGTGACTaGTTATTGAACCAGAGCCAT +
Preference number: 2 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSFTLGD*LLNQSH
Trigger: ATGGCTCTGGTTCAATAAGCAGTCACCCAAAGTAAA...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCAAAAAGGGCTCTCACCTaGTCTGTATACAAAAGTCTA +
Preference number: 2 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSKRALT*SVYKSL
Trigger: TAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTT...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGATACTATATGCCTGGATaGTCAGCATGCTTCAAAATA +
Preference number: 2 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGYYMPG*SACFKI
Trigger: TATTTTGAAGCATGCTGACCATCCAGGCATATAGTA...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAAACTAGAAACTTCCTaGCTATCCCTAAATTCTAGG +
Preference number: 2 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGKLETS*LSLNSR
Trigger: CCTAGAATTTAGGGATAGCCAGGAAGTTTCTAGTTT...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAAGACTTTTCCCTCATTTaGAAATGCTTATACTGGCTT +
Preference number: 2 (lower is better)
Translates to: STTSTIYSISNEMHLERKDFSLI*KCLYWL
Trigger: AAGCCAGTATAAGCATTTCCAAATGAGGGAAAAGTC...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCATACTATATGCCTGGATaGTCAGCATGCTTCAAAATA +
Preference number: 2 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSYYMPG*SACFKI
Trigger: TATTTTGAAGCATGCTGACCATCCAGGCATATAGTA...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAAAAAATACTATATGCCTaGATGGTCAGCATGCTTCAA +
Preference number: 2 (lower is better)
Translates to: STTSTIYSISNEMHLERKKILYA*MVSMLQ
Trigger: TTGAAGCATGCTGACCATCCAGGCATATAGTATTTT...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
37% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CCA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGAATCTACATTGACCACTaGAATATGAACGTGTTTCTA +
Preference number: 2 (lower is better)
Translates to: FLKILYAWMVSMLQNITRIYIDH*NMNVFL
Trigger: TAGAAACACGTTCATATTCCAGTGGTCAATGTAGAT...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR CCA 72 bp CCCTGCACCGCCCCTGGATCCGGCCAAGCGGCCGCCTaGCGCTATTTGCCCTCTGTGACTCTCCGCCAGCCC +
Preference number: 3 (lower is better)
Translates to: PCTAPGSGQAAA*RYLPSVTLRQP
Trigger: GGGCTGGCGGAGAGTCACAGAGGGCAAATAGCGCCAGGCGGCCGCTTGGCCGGATCCAGGGGCGGTGCAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR CCA 72 bp GCAGGGCCGAGAGCCAGCCACACCCACGGTCACAGCTaGGGGCGTGGTCAGCCCCAGTGGCGAGAAACCCTG +
Preference number: 3 (lower is better)
Translates to: AGPRASHTHGHS*GRGQPQWRETL
Trigger: CAGGGTTTCTCGCCACTGGGGCTGACCACGCCCCCAGCTGTGACCGTGGGTGTGGCTGGCTCTCGGCCCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CAA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCAGGCAGGAGGACAGCTaGAGCCCGAGAGGACAGCTT +
Preference number: 3 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGRQEDS*SPRGQL
Trigger: AAGCTGTCCTCTCGGGCTCAAGCTGTCCTCCTGCCT...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677559.1
3UTR CCA 72 bp GCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTaGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATG +
Preference number: 3 (lower is better)
Translates to: ALPPEEACTSVS*RLELGPPGQFM
Trigger: CATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR CCA 72 bp CAGACGCAGCGGACGCTGCTGAGGATGGCTCAGTGGTaGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTC +
Preference number: 3 (lower is better)
Translates to: QTQRTLLRMAQW*GGAPSRGGLYV
Trigger: GACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCGTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR CCA 72 bp GTGCAGACGCAGCGGACGCTGCTGAGGATGGCTCAGTaGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTAC +
Preference number: 3 (lower is better)
Translates to: VQTQRTLLRMAQ*WGGAPSRGGLY
Trigger: GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCGTCTGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR CCA 72 bp AGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTaGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCC +
Preference number: 3 (lower is better)
Translates to: RRPVRLCPGGSS*VLRASSCSPSP
Trigger: GGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CAA 90 bp CAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCCCACGCCAGCCCTGCAGTCATaGCAGAACCAGCTGCCGTCA +
Preference number: 3 (lower is better)
Translates to: QCSGRRGTLQGHTPLNPTPALQS*QNQLPS
Trigger: TGACGGCAGCTGGTTCTGCAATGACTGCAGGGCTGG...CGTGGGGTTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR TCA 72 bp GGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTaGGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTT +
Preference number: 3 (lower is better)
Translates to: GPHPASPEWRRR*EPERGQREDEF
Trigger: AAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR CCA 72 bp GAGAGCCAGCCACACCCACGGTCACAGCTGGGGGCGTaGTCAGCCCCAGTGGCGAGAAACCCTGCAAGCTCA +
Preference number: 3 (lower is better)
Translates to: ESQPHPRSQLGA*SAPVARNPASS
Trigger: TGAGCTTGCAGGGTTTCTCGCCACTGGGGCTGACCACGCCCCCAGCTGTGACCGTGGGTGTGGCTGGCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CAA 90 bp CACCGCCCCTGGATCCGGCCAAGCGGCCGCCTGGCGCTATTTGCCCTCTGTGACGGGTCGTCGAGGTCTTaGGTCTATCCCCGAGGAATC +
Preference number: 3 (lower is better)
Translates to: HRPWIRPSGRLALFALCDGSSRS*VYPRGI
Trigger: GATTCCTCGGGGATAGACCAAAGACCTCGACGACCC...GTCACAGAGGGCAAATAGCGCCAGGCGGCCGCTTGGCCGGATCCAGGGGCGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR TCA 72 bp GCTCACAGCAGTAGGACCGCCCGTCCGGGGTGCAGCTaGAGGCTGTCCCGTCCTGGTGCTCCTTACAGAACG +
Preference number: 3 (lower is better)
Translates to: AHSSRTARPGCS*RLSRPGAPYRT
Trigger: CGTTCTGTAAGGAGCACCAGGACGGGACAGCCTTCAGCTGCACCCCGGACGGGCGGTCCTACTGCTGTGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR GCA 72 bp TGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGTaGAGAACTTGCGGTCACACAGCACCAGCTGCCCGC +
Preference number: 3 (lower is better)
Translates to: CQGPGRTGGRPW*RTCGHTAPAAR
Trigger: GCGGGCAGCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR GCA 72 bp GGAAAGCACTACTCCCACCCTGTCTTAACCGGCGAGTaGCCCTCAGAGGCCACGGCCGCGCGAGCAAGTCAG +
Preference number: 3 (lower is better)
Translates to: GKHYSHPVLTGE*PSEATAARASQ
Trigger: CTGACTTGCTCGCGCGGCCGTGGCCTCTGAGGGGCACTCGCCGGTTAAGACAGGGTGGGAGTAGTGCTTTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR CCA 72 bp CCTTCTGGCCTCCGGGAAAGCCCAAGGCAGGCGAGGTaGAAAGCTCCGCAGCAGGGTCCTTCACAGAGCAGG +
Preference number: 3 (lower is better)
Translates to: PSGLRESPRQAR*KAPQQGPSQSR
Trigger: CCTGCTCTGTGAAGGACCCTGCTGCGGAGCTTTCCACCTCGCCTGCCTTGGGCTTTCCCGGAGGCCAGAAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR CCA 72 bp CGCCCGTCCGGGGTGCAGCTGAAGGCTGTCCCGTCCTaGTGCTCCTTACAGAACGAATTGGGGCAGAGGTGG +
Preference number: 3 (lower is better)
Translates to: RPSGVQLKAVPS*CSLQNELGQRW
Trigger: CCACCTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTTCAGCTGCACCCCGGACGGGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CAA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTTCCCGAAGGGCCGCTaGCCAAGGCCCAGGCAGGAC +
Preference number: 3 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTFPKGR*PRPRQD
Trigger: GTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGAA...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR TCA 72 bp AGCCATGGACGGGTGTCGCCGGAAGAAAGGCCGGCCTaGGGACGGACAGCTGGGTTCTCACTTCAGGTGCCT +
Preference number: 3 (lower is better)
Translates to: SHGRVSPEERPA*GRTAGFSLQVP
Trigger: AGGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTCCGGCGACACCCGTCCATGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR TCA 72 bp CCAGCCGCAGGCTCCACCTCCACGCACCAGGTGACGTaGCTCACTCGGAGAAGCCATTTGTGGAGGTGGCAC +
Preference number: 3 (lower is better)
Translates to: PAAGSTSTHQVT*LTRRSHLWRWH
Trigger: GTGCCACCTCCACAAATGGCTTCTCCGAGTGAGTCACGTCACCTGGTGCGTGGAGGTGGAGCCTGCGGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR TCA 72 bp TCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTaGGCTCCCCTGACTCATGGGCAGGCCTCGACCCCG +
Preference number: 3 (lower is better)
Translates to: SQGQDNCLGQGD*APLTHGQASTP
Trigger: CGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
3UTR GCA 72 bp GCCTTGGTGCAGAACTTGCGGTCACACAGCACCAGCTaGCCGCCATCACCGCAGCGGAAGCACTCGTCCTCT +
Preference number: 3 (lower is better)
Translates to: ALVQNLRSHSTS*PPSPQRKHSSS
Trigger: AGAGGACGAGTGCTTCCGCTGCGGTGATGGCGGGCAGCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR CCA 72 bp GCTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTaGTGCAGAACTTGCGGTCACACAGCACCAGCTGCC +
Preference number: 3 (lower is better)
Translates to: ACQGPGRTGGRP*CRTCGHTAPAA
Trigger: GGCAGCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CAA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCTCTTGCAGTGCGTTTTaGAAGACTCTTCCGATCCCT +
Preference number: 3 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGSCSAF*KTLPIP
Trigger: AGGGATCGGAAGAGTCTTCAAAAACGCACTGCAAGA...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CAA 90 bp ACTTCCCGAAGGGCCGCTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGTTGTATGGTGGGGGCTaGCGCTCGCTCTCCTGTGTT +
Preference number: 3 (lower is better)
Translates to: TSRRAACQGPGRTGGRPWLYGGG*RSLSCV
Trigger: AACACAGGAGAGCGAGCGCAAGCCCCCACCATACAA...CCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CAA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGTCTGTCTTGATGATCTaGGTCTCTGGGTACTGGCGC +
Preference number: 3 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAESVLMI*VSGYWR
Trigger: GCGCCAGTACCCAGAGACCAAGATCATCAAGACAGA...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CAA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCGGGGGCTTCTCAGTCTaGGTGCTTCTGACCGATGCC +
Preference number: 3 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPGGFSV*VLLTDA
Trigger: GGCATCGGTCAGAAGCACCAAGACTGAGAAGCCCCC...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CAA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGCACACATACTCCTTTTaGGCAGTCACTCCTCGCTCA +
Preference number: 3 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWHTYSF*AVTPRS
Trigger: TGAGCGAGGAGTGACTGCCAAAAAGGAGTATGTGTG...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR-3UTR CAA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACCTTGGGTTTGAAGGGTaGGAAGCATGGCAGCTCACA +
Preference number: 3 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYLGFEG*EAWQLT
Trigger: TGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAAG...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR TCA 72 bp GGGACCCTGATGGGAGAAGGGACAGCCACCAGCCAGTaGAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGAC +
Preference number: 3 (lower is better)
Translates to: GTLMGEGTATSQ*NFQSVLREAWD
Trigger: GTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTCACTGGCTGGTGGCTGTCCCTTCTCCCATCAGGGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR GCA 72 bp CCGTCCGGGGTGCAGCTGAAGGCTGTCCCGTCCTGGTaGTCCTTACAGAACGAATTGGGGCAGAGGTGGCAA +
Preference number: 3 (lower is better)
Translates to: PSGVQLKAVPSW*SLQNELGQRWQ
Trigger: TTGCCACCTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTTCAGCTGCACCCCGGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR CCA 72 bp GAGCACACGAAGCACCAGCTCACGTTGACGTGGGCGTaGTGTCGCTTCCCCTTCCGAGCAGTGAAGTGGGCA +
Preference number: 3 (lower is better)
Translates to: EHTKHQLTLTWA*CRFPFRAVKWA
Trigger: TGCCCACTTCACTGCTCGGAAGGGGAAGCGACACCACGCCCACGTCAACGTGAGCTGGTGCTTCGTGTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR CCA 72 bp ATCCCACTCGGAGGAGTGGTCGCTGAGGATTCAGAGTaGCAAGCCGCAGAGCTCTATGAGCCCCGCCCAGGT +
Preference number: 3 (lower is better)
Translates to: IPLGGVVAEDSE*QAAELYEPRPG
Trigger: ACCTGGGCGGGGCTCATAGAGCTCTGCGGCTTGCCACTCTGAATCCTCAGCGACCACTCCTCCGAGTGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR-3UTR CAA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTTTTGGGGGAACATTTTaGGGATGGCAAACTTCTGCC +
Preference number: 3 (lower is better)
Translates to: TYEARTPARQASTPRTAPFGGTF*GWQTSA
Trigger: GGCAGAAGTTTGCCATCCCAAAAATGTTCCCCCAAA...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CAA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTTTCACCTTGATGTGCTaGTATGGTGGGGGCTTGCGC +
Preference number: 3 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPFTLMC*YGGGLR
Trigger: GCGCAAGCCCCCACCATACAAGCACATCAAGGTGAA...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CAA 90 bp CGGGGTGCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGTTTCTGATGTCCCTCTaGGCGACCAGGCCCCACCCT +
Preference number: 3 (lower is better)
Translates to: RGAAEGCPVLVLLTERIGFLMSL*ATRPHP
Trigger: AGGGTGGGGCCTGGTCGCCAAGAGGGACATCAGAAA...CCCAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTTCAGCTGCACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CAA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGAGGAATCCACTGCAATaGGAGGCTCCACACCGGCAG +
Preference number: 3 (lower is better)
Translates to: KHCEGDPASHGRVSPEERRNPLQ*EAPHRQ
Trigger: CTGCCGGTGTGGAGCCTCCAATTGCAGTGGATTCCT...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CAA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGTTCCCGAAGGGCCGCTaGCCAAGGCCCAGGCAGGAC +
Preference number: 3 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWFPKGR*PRPRQD
Trigger: GTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGAA...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR CCA 72 bp ACCCAGCACTTGTTCTGGCAGCCTCACACACACCTCTaGACACACACACCATGGGCAAGCAAGGCCAGGGCC +
Preference number: 3 (lower is better)
Translates to: TQHLFWQPHTHL*THTPWASKARA
Trigger: GGCCCTGGCCTTGCTTGCCCATGGTGTGTGTGTCCAGAGGTGTGTGTGAGGCTGCCAGAACAAGTGCTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR CCA 72 bp CTATCAGACAGGAGCCTCTCCAGCGAGGGGAATCCGTaGCTTTACAGCCCTCCATGCACGTCTCAGGCCCAG +
Preference number: 3 (lower is better)
Translates to: LSDRSLSSEGNP*LYSPPCTSQAQ
Trigger: CTGGGCCTGAGACGTGCATGGAGGGCTGTAAAGCCACGGATTCCCCTCGCTGGAGAGGCTCCTGTCTGATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGGGGCTGTCCGAGACCTaGGTCTTAAAATTTGTTATC +
Preference number: 3 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAEGLSET*VLKFVI
Trigger: GATAACAAATTTTAAGACCAAGGTCTCGGACAGCCC...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312087.10
3UTR-3UTR CAA 90 bp CGGAAGAAAGGCCGGCCTGAGGACGGACAGCTGGGTTCTCACTTCAGGTGCCTGTTCTCGTGTGCGTGCTaGATTCTCGCCATGCACTCC +
Preference number: 3 (lower is better)
Translates to: RKKGRPEDGQLGSHFRCLFSCAC*ILAMHS
Trigger: GGAGTGCATGGCGAGAATCAAGCACGCACACGAGAA...CAGGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CAA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGAGCCTCCTTGGCTACTaGAGGGTTGAGATGAAGCTG +
Preference number: 3 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKSLLGY*RVEMKL
Trigger: CAGCTTCATCTCAACCCTCAAGTAGCCAAGGAGGCT...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR TCA 72 bp GTGGGCAGTGCAGATGATGCTGTTGGAGGCGATCACTaGGCATCCTGCTGCCAGACAAGCATCCCCGCTGTG +
Preference number: 3 (lower is better)
Translates to: VGSADDAVGGDH*ASCCQTSIPAV
Trigger: CACAGCGGGGATGCTTGTCTGGCAGCAGGATGCTCAGTGATCGCCTCCAACAGCATCATCTGCACTGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR TCA 72 bp GCCACACATGGGACTGTCCCTCTCACTGCAGAGTGCTaGGTTCACTTGCCCCTGCCCACCTTCCCAATGTCC +
Preference number: 3 (lower is better)
Translates to: ATHGTVPLTAEC*VHLPLPTFPMS
Trigger: GGACATTGGGAAGGTGGGCAGGGGCAAGTGAACTCAGCACTCTGCAGTGAGAGGGACAGTCCCATGTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR TCA 72 bp TTACTCCAGCCGCAGGCTCCACCTCCACGCACCAGGTaGCGTGACTCACTCGGAGAAGCCATTTGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: LLQPQAPPPRTR*RDSLGEAICGG
Trigger: ACCTCCACAAATGGCTTCTCCGAGTGAGTCACGTCACCTGGTGCGTGGAGGTGGAGCCTGCGGCTGGAGTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR TCA 72 bp GACCATGGCAGAGACCTGGCCAGAAGTGCCGCCTTCTaGCTCAGCAAGAGTAAGGGGCCTGTCCAACCCTTG +
Preference number: 3 (lower is better)
Translates to: DHGRDLARSAAF*LSKSKGPVQPL
Trigger: CAAGGGTTGGACAGGCCCCTTACTCTTGCTGAGTCAGAAGGCGGCACTTCTGGCCAGGTCTCTGCCATGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR GCA 72 bp AGCGCCCTACGGGGCTCCCTAAGTTGTCACTTCCTGTaGTCTAAGCAGACTGCGGTCTCACGCCCTGCAAAG +
Preference number: 3 (lower is better)
Translates to: SALRGSLSCHFL*SKQTAVSRPAK
Trigger: CTTTGCAGGGCGTGAGACCGCAGTCTGCTTAGAGCACAGGAAGTGACAACTTAGGGAGCCCCGTAGGGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR GCA 72 bp CCCCTGTGGGCGCACACGGGTGGGTATGGGTTTAGGTaGAGATGCTGGTTTCGGATGCCAAGGAATCCTGAG +
Preference number: 3 (lower is better)
Translates to: PLWAHTGGYGFR*RCWFRMPRNPE
Trigger: CTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCCATACCCACCCGTGTGCGCCCACAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR GCA 72 bp ACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTaGGAAGGGGACCCAGCCAGCCATGGACGGGTGTCG +
Preference number: 3 (lower is better)
Translates to: TRRGLDVKTDKH*EGDPASHGRVS
Trigger: CGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR CCA 72 bp TGGGCGTGGTGTCGCTTCCCCTTCCGAGCAGTGAAGTaGGCAGTGCAGATGATGCTGTTGGAGGCGATCACT +
Preference number: 3 (lower is better)
Translates to: WAWCRFPFRAVK*AVQMMLLEAIT
Trigger: AGTGATCGCCTCCAACAGCATCATCTGCACTGCCCACTTCACTGCTCGGAAGGGGAAGCGACACCACGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR CCA 72 bp CACACCCCATCCTTCCTGGGGACCATGGCAGAGACCTaGCCAGAAGTGCCGCCTTCTGACTCAGCAAGAGTA +
Preference number: 3 (lower is better)
Translates to: HTPSFLGTMAET*PEVPPSDSARV
Trigger: TACTCTTGCTGAGTCAGAAGGCGGCACTTCTGGCCAGGTCTCTGCCATGGTCCCCAGGAAGGATGGGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR-3UTR CAA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGCTTGGGTTTGAAGGGTaGGAAGCATGGCAGCTCACA +
Preference number: 3 (lower is better)
Translates to: KHCEGDPASHGRVSPEERLGFEG*EAWQLT
Trigger: TGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAAG...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR-3UTR CAA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAATACCTTTTGACGGCCTaGGGTTTGAAGGGTTGGAAG +
Preference number: 3 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEYLLTA*GLKGWK
Trigger: CTTCCAACCCTTCAAACCCAAGGCCGTCAAAAGGTA...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR-3UTR CAA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGCCTTTGCCATCTGTCTaGATGATCTTGGTCTCTGGG +
Preference number: 3 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGPLPSV*MILVSG
Trigger: CCCAGAGACCAAGATCATCAAGACAGATGGCAAAGG...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CAA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAATTTCTGATGTCCCTCTaGGCGACCAGGCCCCACCCT +
Preference number: 3 (lower is better)
Translates to: LRARKGATRRRVSSDPWEFLMSL*ATRPHP
Trigger: AGGGTGGGGCCTGGTCGCCAAGAGGGACATCAGAAA...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CAA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTAAGGAATCCACTGCAATaGGAGGCTCCACACCGGCAG +
Preference number: 3 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVRNPLQ*EAPHRQ
Trigger: CTGCCGGTGTGGAGCCTCCAATTGCAGTGGATTCCT...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CAA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGACGTGTGCTGTTAGTTaGTTTCTGAGGGTAGCGACG +
Preference number: 3 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKTCAVS*FLRVAT
Trigger: CGTCGCTACCCTCAGAAACAAACTAACAGCACACGT...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp CACAGGAGCAGCAAGCTTGCTCCTGACAGCATGGCTCTCACACAGCATCCTCCCGCAGAGCTACACAGTTaGGCCCTCCGCCTTCTCTTC +
Preference number: 3 (lower is better)
Translates to: HRSSKLAPDSMALTQHPPAELHS*ALRLLF
Trigger: GAAGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTGC...GGGAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR CAA 90 bp ACTTCCCGAAGGGCCGCTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGCCTCGCTCAGACTTTTaGGATGAGACAGATACTTCA +
Preference number: 3 (lower is better)
Translates to: TSRRAACQGPGRTGGRPWPRSDF*DETDTS
Trigger: TGAAGTATCTGTCTCATCCAAAAAGTCTGAGCGAGG...CCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR-3UTR CAA 90 bp GCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGGCAGAGTTCACCTTGATGTGCTaGTATGGTGGGGGCTTGCGC +
Preference number: 3 (lower is better)
Translates to: AAEGCPVLVLLTERIGAEFTLMC*YGGGLR
Trigger: GCGCAAGCCCCCACCATACAAGCACATCAAGGTGAA...CTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTTCAGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CAA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCAGCCTTGGTGCAGAACTaGCGGTCACACAGCACCAGC +
Preference number: 3 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPALVQN*RSHSTS
Trigger: GCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGGC...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CAA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCAGATTACAGTATCCCCTaGGTCCGGGGCCTTGGATCA +
Preference number: 3 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPDYSIP*VRGLGS
Trigger: TGATCCAAGGCCCCGGACCAAGGGGATACTGTAATC...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCATGCAGTGAGCCGAGATaGTGCCACTTACTGCACTCC +
Preference number: 3 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPCSEPR*CHLLHS
Trigger: GGAGTGCAGTAAGTGGCACAATCTCGGCTCACTGCA...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGCTGTCTGCGAAGGACTaGAGGACAATGACAAAACTG +
Preference number: 3 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKLSAKD*RTMTKL
Trigger: CAGTTTTGTCATTGTCCTCAAGTCCTTCGCAGACAG...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR GCA 72 bp GGACAATGCTGCCACACATGGGACTGTCCCTCTCACTaGAGAGTGCTGAGTTCACTTGCCCCTGCCCACCTT +
Preference number: 3 (lower is better)
Translates to: GQCCHTWDCPSH*RVLSSLAPAHL
Trigger: AAGGTGGGCAGGGGCAAGTGAACTCAGCACTCTGCAGTGAGAGGGACAGTCCCATGTGTGGCAGCATTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR CCA 72 bp CCTTTTGACGGCCTTGGGTTTGAAGGGTTGGAAGCATaGCAGCTCACACAGCTGTGGAGGGGGCAGCGGAAA +
Preference number: 3 (lower is better)
Translates to: PFDGLGFEGLEA*QLTQLWRGQRK
Trigger: TTTCCGCTGCCCCCTCCACAGCTGTGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAAGGCCGTCAAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR CCA 72 bp GCGCACACGGGTGGGTATGGGTTTAGGTGCAGATGCTaGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGG +
Preference number: 3 (lower is better)
Translates to: AHTGGYGFRCRC*FRMPRNPEGLG
Trigger: CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCCATACCCACCCGTGTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR CCA 72 bp GGTTTGAGTCCCTGCAGAAAATCCCACTCGGAGGAGTaGTCGCTGAGGATTCAGAGTGGCAAGCCGCAGAGC +
Preference number: 3 (lower is better)
Translates to: GLSPCRKSHSEE*SLRIQSGKPQS
Trigger: GCTCTGCGGCTTGCCACTCTGAATCCTCAGCGACCACTCCTCCGAGTGGGATTTTCTGCAGGGACTCAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR CCA 72 bp ACTGGGATGCTGCATCTCCCTTCCTGCTTCGTGGCATaGAGACTGTGGTCTTCTTCCTCCCAGGAGGAGACC +
Preference number: 3 (lower is better)
Translates to: TGMLHLPSCFVA*RLWSSSSQEET
Trigger: GGTCTCCTCCTGGGAGGAAGAAGACCACAGTCTCCATGCCACGAAGCAGGAAGGGAGATGCAGCATCCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR CAA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTCCTCGCTCAGACTTTTaGGATGAGACAGATACTTCA +
Preference number: 3 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPPRSDF*DETDTS
Trigger: TGAAGTATCTGTCTCATCCAAAAAGTCTGAGCGAGG...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR-3UTR CAA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGGGGTCGTCGAGGTCTTaGGTCTATCCCCGAGGAATC +
Preference number: 3 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWGSSRS*VYPRGI
Trigger: GATTCCTCGGGGATAGACCAAAGACCTCGACGACCC...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CAA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCAACTCGGAGAAGCCATTaGTGGAGGTGGCACATTCAC +
Preference number: 3 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPTRRSH*WRWHIH
Trigger: GTGAATGTGCCACCTCCACAAATGGCTTCTCCGAGT...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp TCTCGACCACCACTGAGTTGGTTTGAGTCCCTGCAGAAAATCCCACTCGGAGGAGGGCCTGTCCAACCCTaGCCTCACTACCCTGTTCCA +
Preference number: 3 (lower is better)
Translates to: SRPPLSWFESLQKIPLGGGPVQP*PHYPVP
Trigger: TGGAACAGGGTAGTGAGGCAAGGGTTGGACAGGCCC...TCCTCCGAGTGGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR TCA 72 bp TTGTTTCCCGCGTCCACCACAGCCATGCTGCGGCACTaGGCTCCGAGCAGCTTAGCTCCTGACTTTTCAAAG +
Preference number: 3 (lower is better)
Translates to: LFPASTTAMLRH*APSSLAPDFSK
Trigger: CTTTGAAAAGTCAGGAGCTAAGCTGCTCGGAGCTCAGTGCCGCAGCATGGCTGTGGTGGACGCGGGAAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR GCA 72 bp CCTGGAAGTGCAGCTTCTTCCCAGCCCTGCAGTCATTaGAGAACCAGCTGCCGTCAGGCATCTCGATGTTCA +
Preference number: 3 (lower is better)
Translates to: PGSAASSQPCSH*RTSCRQASRCS
Trigger: TGAACATCGAGATGCCTGACGGCAGCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAGCTGCACTTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR GCA 72 bp GTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTaGATCTTCCATCACCAGACCCACAGAGTGCTGAGA +
Preference number: 3 (lower is better)
Translates to: VPWQRAHVISRD*IFHHQTHRVLR
Trigger: TCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR GCA 72 bp TGGGCGCACACGGGTGGGTATGGGTTTAGGTGCAGATaGTGGTTTCGGATGCCAAGGAATCCTGAGGGATTG +
Preference number: 3 (lower is better)
Translates to: WAHTGGYGFRCR*WFRMPRNPEGL
Trigger: CAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCCATACCCACCCGTGTGCGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR GCA 72 bp ATGAGCCCACTCCTGGCATCTGAAGTGGGACAATGCTaGCACACATGGGACTGTCCCTCTCACTGCAGAGTG +
Preference number: 3 (lower is better)
Translates to: MSPLLASEVGQC*HTWDCPSHCRV
Trigger: CACTCTGCAGTGAGAGGGACAGTCCCATGTGTGGCAGCATTGTCCCACTTCAGATGCCAGGAGTGGGCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR GCA 72 bp GTCTGGCCGACTGCAGACAGCAGGCTGTGCACTGTCTaGGAAGGACTTGAGGACAATGACAAAACTGCCCAC +
Preference number: 3 (lower is better)
Translates to: VWPTADSRLCTV*EGLEDNDKTAH
Trigger: GTGGGCAGTTTTGTCATTGTCCTCAAGTCCTTCGCAGACAGTGCACAGCCTGCTGTCTGCAGTCGGCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR GCA 72 bp AGGAGCCTGGTCTGGCCGACTGCAGACAGCAGGCTGTaGACTGTCTGCGAAGGACTTGAGGACAATGACAAA +
Preference number: 3 (lower is better)
Translates to: RSLVWPTADSRL*TVCEGLEDNDK
Trigger: TTTGTCATTGTCCTCAAGTCCTTCGCAGACAGTGCACAGCCTGCTGTCTGCAGTCGGCCAGACCAGGCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR GCA 72 bp ACTCTTCCCTATGTCGGGGTGACTCTCCAGGGTCTCTaGAGAGCTACACAGTTTGGCCCTCCGCCTTCTCTT +
Preference number: 3 (lower is better)
Translates to: TLPYVGVTLQGL*RATQFGPPPSL
Trigger: AAGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTGCAGAGACCCTGGAGAGTCACCCCGACATAGGGAAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR GCA 72 bp AGGAGGAGACCCTACTCCTCTTCTGGGGTCAGCCTCTaGCGTCTTTTGAGGAGTACTCTTCCCTATGTCGGG +
Preference number: 3 (lower is better)
Translates to: RRRPYSSSGVSL*RLLRSTLPYVG
Trigger: CCCGACATAGGGAAGAGTACTCCTCAAAAGACGGCAGAGGCTGACCCCAGAAGAGGAGTAGGGTCTCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR CCA 72 bp CGCGAGCAAGTCAGTGGCTACACAGCTCGTTTCCCCTaGGTCCTCTGTGTAGTTAACTTTGCTGGGGACCCT +
Preference number: 3 (lower is better)
Translates to: REQVSGYTARFP*VLCVVNFAGDP
Trigger: AGGGTCCCCAGCAAAGTTAACTACACAGAGGACCCAGGGGAAACGAGCTGTGTAGCCACTGACTTGCTCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR CCA 72 bp CACATTTTAAGCTGCCCATTCGGACACATCCCCCTGTaGGCGCACACGGGTGGGTATGGGTTTAGGTGCAGA +
Preference number: 3 (lower is better)
Translates to: HILSCPFGHIPL*AHTGGYGFRCR
Trigger: TCTGCACCTAAACCCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR CCA 72 bp CTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCAGGTaGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGT +
Preference number: 3 (lower is better)
Translates to: LLCSRSHIAPSR*QQGPSVTCGQS
Trigger: ACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCTTGGGGCTATGTGGCTACGGCTACACAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR CCA 72 bp CCGCCCAGGTTGCCTAGGTCCCTGACCTTCCTGCACTaGAAGGCCTACACTCCTCTAATGAGTGGAAACAAC +
Preference number: 3 (lower is better)
Translates to: PPRLPRSLTFLH*KAYTPLMSGNN
Trigger: GTTGTTTCCACTCATTAGAGGAGTGTAGGCCTTCCAGTGCAGGAAGGTCAGGGACCTAGGCAACCTGGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR-3UTR CAA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAAAGCACCAGCTCACGTaGACGTGGGCGTGGTGTCGC +
Preference number: 3 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLKHQLT*TWAWCR
Trigger: GCGACACCACGCCCACGTCAACGTGAGCTGGTGCTT...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CAA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGGTAACACAGCTTAGATaGCTCCTAGACCATCTTTGG +
Preference number: 3 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWVTQLR*LLDHLW
Trigger: CCAAAGATGGTCTAGGAGCAATCTAAGCTGTGTTAC...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCAAACCTGCACAGGCTTTaGTGTAGCCGTAGCCACATA +
Preference number: 3 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPNLHRL*CSRSHI
Trigger: TATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTT...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR TCA 72 bp TCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTaGGGCTGTTTGTCCAGGAACGCTGAGCTGGGCTCA +
Preference number: 3 (lower is better)
Translates to: SEKFKCGGNAEE*GCLSRNAELGS
Trigger: TGAGCCCAGCTCAGCGTTCCTGGACAAACAGCCTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR TCA 72 bp GATAAGAACCTAGCGAGTTCAGAAGATAGGCCCAGGTaGGAAGTAGGCCCAACCCGGCCAGGCCTCGAAAGT +
Preference number: 3 (lower is better)
Translates to: DKNLASSEDRPR*EVGPTRPGLES
Trigger: ACTTTCGAGGCCTGGCCGGGTTGGGCCTACTTCTCACCTGGGCCTATCTTCTGAACTCGCTAGGTTCTTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR TCA 72 bp GAGATGGTCCTCTCGGAAAACTCCGCTCCTCTAGGATaGGCCCACTCCTGGCATCTGAAGTGGGACAATGCT +
Preference number: 3 (lower is better)
Translates to: EMVLSENSAPLG*AHSWHLKWDNA
Trigger: AGCATTGTCCCACTTCAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGAGTTTTCCGAGAGGACCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR TCA 72 bp AATATCCTATCAACCCAACTTTGTCCCACTGTGTCCTaGGCAGCGGCCATCCCACAGGGAGTGTGCTGGGGA +
Preference number: 3 (lower is better)
Translates to: NILSTQLCPTVS*AAAIPQGVCWG
Trigger: TCCCCAGCACACTCCCTGTGGGATGGCCGCTGCTCAGGACACAGTGGGACAAAGTTGGGTTGATAGGATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR CCA 72 bp AGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATaGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGA +
Preference number: 3 (lower is better)
Translates to: RYFSLCFVCTFV*GLRGLVSRAVR
Trigger: TCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
3UTR CCA 72 bp CTTCCTGCACTGGAAGGCCTACACTCCTCTAATGAGTaGAAACAACTGAGGCACACCCCATCCTTCCTGGGG +
Preference number: 3 (lower is better)
Translates to: LPALEGLHSSNE*KQLRHTPSFLG
Trigger: CCCCAGGAAGGATGGGGTGTGCCTCAGTTGTTTCCACTCATTAGAGGAGTGTAGGCCTTCCAGTGCAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR CCA 72 bp CCACCATCCGTGAACAGGTCTCGACCACCACTGAGTTaGTTTGAGTCCCTGCAGAAAATCCCACTCGGAGGA +
Preference number: 3 (lower is better)
Translates to: PPSVNRSRPPLS*FESLQKIPLGG
Trigger: TCCTCCGAGTGGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCGAGACCTGTTCACGGATGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR CCA 72 bp GGTGACTCTCCAGGGTCTCTGCAGAGCTACACAGTTTaGCCCTCCGCCTTCTCTTCATGGGAATGCACTCTT +
Preference number: 3 (lower is better)
Translates to: GDSPGSLQSYTV*PSAFSSWECTL
Trigger: AAGAGTGCATTCCCATGAAGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTGCAGAGACCCTGGAGAGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR CCA 72 bp TCTTCTTCCTCCCAGGAGGAGACCCTACTCCTCTTCTaGGGTCAGCCTCTGCCGTCTTTTGAGGAGTACTCT +
Preference number: 3 (lower is better)
Translates to: SSSSQEETLLLF*GQPLPSFEEYS
Trigger: AGAGTACTCCTCAAAAGACGGCAGAGGCTGACCCCAGAAGAGGAGTAGGGTCTCCTCCTGGGAGGAAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR CCA 72 bp CAAAAACTGGGATGCTGCATCTCCCTTCCTGCTTCGTaGCATGGAGACTGTGGTCTTCTTCCTCCCAGGAGG +
Preference number: 3 (lower is better)
Translates to: QKLGCCISLPAS*HGDCGLLPPRR
Trigger: CCTCCTGGGAGGAAGAAGACCACAGTCTCCATGCCACGAAGCAGGAAGGGAGATGCAGCATCCCAGTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR CAA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGCGCGTAAACTACACGTaGAAAGTGGACGTGTTATTG +
Preference number: 3 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWRVNYT*KVDVLL
Trigger: CAATAACACGTCCACTTTCAACGTGTAGTTTACGCG...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CAA 90 bp AACAGGGCCACCCCTTCCGTGCAAAGCCCTGCTGCAGCTCTGGACAGCCCCCAAGATAGAGTCTTTACTTaGGGTGACTGCTTATTGAAC +
Preference number: 3 (lower is better)
Translates to: NRATPSVQSPAAALDSPQDRVFT*GDCLLN
Trigger: GTTCAATAAGCAGTCACCCAAAGTAAAGACTCTATC...TTGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp GGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAATGCCTATCAACCCAACTTaGTCCCACTGTGTCCTGAGC +
Preference number: 3 (lower is better)
Translates to: GQVAAAPNSRPALVKGKMPINPT*SHCVLS
Trigger: GCTCAGGACACAGTGGGACAAAGTTGGGTTGATAGG...CATTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp GGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGAGACCTCATTCTCAGTTAAGGGAAGGAGATGAACTTTaGCTAAACCCAAGAGCTGAA +
Preference number: 3 (lower is better)
Translates to: GTPRARLPGCPRPHSQLREGDEL*LNPRAE
Trigger: TTCAGCTCTTGGGTTTAGCAAAAGTTCATCTCCTTC...CCTTAACTGAGAATGAGGTCTCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511904.1
3UTR-3UTR CAA 90 bp CTCCGCTCCTCTAGGATGAGCCCACTCCTGGCATCTGAAGTGGGACAATGCTGCTCTTCTCTCACAGACTaGGGGTTTTCAGCAGCTTCT +
Preference number: 3 (lower is better)
Translates to: LRSSRMSPLLASEVGQCCSSLTD*GFSAAS
Trigger: AGAAGCTGCTGAAAACCCCAAGTCTGTGAGAGAAGA...GCAGCATTGTCCCACTTCAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR TCA 72 bp CCGGCCACCATCTGTAGTTCCCAAGTTTCACCCAAATaGTATCCTGGAAGTGCAGCTTCTTCCCAGCCCTGC +
Preference number: 3 (lower is better)
Translates to: PATICSSQVSPK*YPGSAASSQPC
Trigger: GCAGGGCTGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGGAACTACAGATGGTGGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR TCA 72 bp CTAGGTCTGGAAGCAACAGGAATCAGGTGTGGTGTGTaGGTCGCCTTCCACCCCACCCAGTATATGTCAGCT +
Preference number: 3 (lower is better)
Translates to: LGLEATGIRCGV*VAFHPTQYMSA
Trigger: AGCTGACATATACTGGGTGGGGTGGAAGGCGACTCACACACCACACCTGATTCCTGTTGCTTCCAGACCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR TCA 72 bp ATCCGTGAACAGGTCTCGACCACCACTGAGTTGGTTTaGGTCCCTGCAGAAAATCCCACTCGGAGGAGTGGT +
Preference number: 3 (lower is better)
Translates to: IREQVSTTTELV*VPAENPTRRSG
Trigger: ACCACTCCTCCGAGTGGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCGAGACCTGTTCACGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR GCA 72 bp AGTGAGCATGTAGAAGTGGGTGATGTCGTTCTCGTGTaGGTGCTTGATTCTCGCCATGCACTCCTCCTCGTC +
Preference number: 3 (lower is better)
Translates to: SEHVEVGDVVLV*VLDSRHALLLV
Trigger: GACGAGGAGGAGTGCATGGCGAGAATCAAGCACGCACACGAGAACGACATCACCCACTTCTACATGCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR GCA 72 bp CTGTATGAGCCGCAGTCAGATGCCACCTTCTGTGACTaGAAAGCGCTCACCTACTCTTCAGAGTGGCGTCAT +
Preference number: 3 (lower is better)
Translates to: LYEPQSDATFCD*KALTYSSEWRH
Trigger: ATGACGCCACTCTGAAGAGTAGGTGAGCGCTTTGCAGTCACAGAAGGTGGCATCTGACTGCGGCTCATACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR CCA 72 bp CTAGTGAACACATTCCAGCCAACTGCTAAAAGCACGTaGCCCTTCAGGGTGACCTGTATGAGCCGCAGTCAG +
Preference number: 3 (lower is better)
Translates to: LVNTFQPTAKST*PFRVTCMSRSQ
Trigger: CTGACTGCGGCTCATACAGGTCACCCTGAAGGGCCACGTGCTTTTAGCAGTTGGCTGGAATGTGTTCACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp TCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGGCAGAGGTGGCAAAATGAAGGTGCAGATGATGCTGTaGGAGGCGATCACTGAGCAT +
Preference number: 3 (lower is better)
Translates to: SRPGAPYRTNWGRGGKMKVQMML*EAITEH
Trigger: ATGCTCAGTGATCGCCTCCAACAGCATCATCTGCAC...CTTCATTTTGCCACCTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGACGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CAA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGATTTGGGGGAACATTTTaGGGATGGCAAACTTCTGCC +
Preference number: 3 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRFGGTF*GWQTSA
Trigger: GGCAGAAGTTTGCCATCCCAAAAATGTTCCCCCAAA...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CAA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGCCTTTGCCATCTGTCTaGATGATCTTGGTCTCTGGG +
Preference number: 3 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGPLPSV*MILVSG
Trigger: CCCAGAGACCAAGATCATCAAGACAGATGGCAAAGG...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CAA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCAACACCATTTGGTCATTaGCAGGGTTTTGCTTTCTCC +
Preference number: 3 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPTPFGH*QGFAFS
Trigger: GGAGAAAGCAAAACCCTGCAAATGACCAAATGGTGT...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp CTCCGCTCCTCTAGGATGAGCCCACTCCTGGCATCTGAAGTGGGACAATGCTGCACACCATTTGGTCATTaGCAGGGTTTTGCTTTCTCC +
Preference number: 3 (lower is better)
Translates to: LRSSRMSPLLASEVGQCCTPFGH*QGFAFS
Trigger: GGAGAAAGCAAAACCCTGCAAATGACCAAATGGTGT...GCAGCATTGTCCCACTTCAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp GCTATCAGACAGGAGCCTCTCCAGCGAGGGGAATCCGTGGCTTTACAGCCCTCCATGTCATGCTGCTCTTaGGACACCATTTGGTCATTT +
Preference number: 3 (lower is better)
Translates to: AIRQEPLQRGESVALQPSMSCCS*DTIWSF
Trigger: AAATGACCAAATGGTGTCCAAAGAGCAGCATGACAT...GGAGGGCTGTAAAGCCACGGATTCCCCTCGCTGGAGAGGCTCCTGTCTGATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCATCACGACATGAAAGGTaGTGTCATGAAACCTCGCTT +
Preference number: 3 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPSRHER*CHETSL
Trigger: AAGCGAGGTTTCATGACACAACCTTTCATGTCGTGA...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCAAAGGAAGCATGCTCCTaGCTCATCCAGTATAGGAAT +
Preference number: 3 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPKEACS*LIQYRN
Trigger: ATTCCTATACTGGATGAGCAAGGAGCATGCTTCCTT...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR TCA 72 bp TCGCCTTCCACCCCACCCAGTATATGTCAGCTCAACTaGCACTGTGCCCTTTCAGAACCAACGCAGACTTAC +
Preference number: 3 (lower is better)
Translates to: SPSTPPSICQLN*HCALSEPTQTY
Trigger: GTAAGTCTGCGTTGGTTCTGAAAGGGCACAGTGTCAGTTGAGCTGACATATACTGGGTGGGGTGGAAGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR GCA 72 bp GTGGGTATGGGTTTAGGTGCAGATGCTGGTTTCGGATaGCAAGGAATCCTGAGGGATTGGGGCGGTTTTTGT +
Preference number: 3 (lower is better)
Translates to: VGMGLGADAGFG*QGILRDWGGFC
Trigger: ACAAAAACCGCCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCCATACCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CAA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTAGACAGATACTTCAGTTaGTGTTTCGTCTGCACTTTC +
Preference number: 3 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVDRYFS*CFVCTF
Trigger: GAAAGTGCAGACGAAACACAAACTGAAGTATCTGTC...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR-3UTR CAA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGACACACATACTCCTTTTaGGCAGTCACTCCTCGCTCA +
Preference number: 3 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRHTYSF*AVTPRS
Trigger: TGAGCGAGGAGTGACTGCCAAAAAGGAGTATGTGTG...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR-3UTR CAA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCATCTTGCAGTGCGTTTTaGAAGACTCTTCCGATCCCT +
Preference number: 3 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPSCSAF*KTLPIP
Trigger: AGGGATCGGAAGAGTCTTCAAAAACGCACTGCAAGA...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CAA 90 bp AACAAATTCTCCCTTTCTGATGTCCCTCTTGGCGACCAGGCCCCACCCTTTGCCACGAGCTTCAGCTTCTaGCAGTGCGTTTTTGAAGAC +
Preference number: 3 (lower is better)
Translates to: NKFSLSDVPLGDQAPPFATSFSF*QCVFED
Trigger: GTCTTCAAAAACGCACTGCAAGAAGCTGAAGCTCGT...GGCAAAGGGTGGGGCCTGGTCGCCAAGAGGGACATCAGAAAGGGAGAATTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CAA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGTCTGTGGGCTTGCAGTaGCACTTAGGGATTTCTGAA +
Preference number: 3 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWSVGLQ*HLGISE
Trigger: TTCAGAAATCCCTAAGTGCAACTGCAAGCCCACAGA...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CAA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGACGCGTAAACTACACGTaGAAAGTGGACGTGTTATTG +
Preference number: 3 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRRVNYT*KVDVLL
Trigger: CAATAACACGTCCACTTTCAACGTGTAGTTTACGCG...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CAA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGTTCCTGCCTCTTATGTaGGAAATTAGTGTAGTATCT +
Preference number: 3 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWFLPLM*EISVVS
Trigger: AGATACTACACTAATTTCCAACATAAGAGGCAGGAA...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp CAGGGCCGCATCAGTAAACACACACTTCAGTCGGTGGTGATTTGTGAAATAGGTTTGACGGCCTTGGGTTaGAAGGGTTGGAAGCATGGC +
Preference number: 3 (lower is better)
Translates to: QGRISKHTLQSVVICEIGLTALG*KGWKHG
Trigger: GCCATGCTTCCAACCCTTCAAACCCAAGGCCGTCAA...ACCTATTTCACAAATCACCACCGACTGAAGTGTGTGTTTACTGATGCGGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR-3UTR CAA 90 bp TGCTGTTTTGACGTAAGCATTGGTAGTCCCTTACCTGCCGGAAGGGATCTTTTGTTCTCGTGTGCGTGCTaGATTCTCGCCATGCACTCC +
Preference number: 3 (lower is better)
Translates to: CCFDVSIGSPLPAGRDLLFSCAC*ILAMHS
Trigger: GGAGTGCATGGCGAGAATCAAGCACGCACACGAGAA...CAAAAGATCCCTTCCGGCAGGTAAGGGACTACCAATGCTTACGTCAAAACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CAA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGACGTGTGCTGTTAGTTaGTTTCTGAGGGTAGCGACG +
Preference number: 3 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKTCAVS*FLRVAT
Trigger: CGTCGCTACCCTCAGAAACAAACTAACAGCACACGT...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR TCA 72 bp CAAGCTCAGGGCCGCTACCCCAAAGCCTGGCTCCACTaGGTTATCAACGGGTATTGTAGAGACATTCAAAGT +
Preference number: 3 (lower is better)
Translates to: QAQGRYPKAWLH*VINGYCRDIQS
Trigger: ACTTTGAATGTCTCTACAATACCCGTTGATAACTCAGTGGAGCCAGGCTTTGGGGTAGCGGCCCTGAGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR TCA 72 bp ACTGGCAGTGAGCACCAATGCTGCGCTTATGAAGTCTaGGCATTACTCACACTGCAGCGTGGGCAGCTAAAT +
Preference number: 3 (lower is better)
Translates to: TGSEHQCCAYEV*ALLTLQRGQLN
Trigger: ATTTAGCTGCCCACGCTGCAGTGTGAGTAATGCTCAGACTTCATAAGCGCAGCATTGGTGCTCACTGCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR TCA 72 bp TTGTGTCTCTCTTCCGAAGACTGTGCTTGTCCGTCCTaGGTCTTTTCCTGGGTGTGTCCTCAGCTTCAGCAT +
Preference number: 3 (lower is better)
Translates to: LCLSSEDCACPS*VFSWVCPQLQH
Trigger: ATGCTGAAGCTGAGGACACACCCAGGAAAAGACTCAGGACGGACAAGCACAGTCTTCGGAAGAGAGACACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR CCA 72 bp CCGGCTTCTCACACAGCTGGCACACATACTCCTTTTTaGCAGTCACTCCTCGCTCAGACTTTTTGGATGAGA +
Preference number: 3 (lower is better)
Translates to: PASHTAGTHTPF*QSLLAQTFWMR
Trigger: TCTCATCCAAAAAGTCTGAGCGAGGAGTGACTGCCAAAAAGGAGTATGTGTGCCAGCTGTGTGAGAAGCCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR CCA 72 bp TCCTGGTGCTCCTTACAGAACGAATTGGGGCAGAGGTaGCAAAATGAAGTCGAAGGTTTGCCACACACGTCA +
Preference number: 3 (lower is better)
Translates to: SWCSLQNELGQR*QNEVEGLPHTS
Trigger: TGACGTGTGTGGCAAACCTTCGACTTCATTTTGCCACCTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR CCA 72 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTaGGAAAAGCCTACGCTACACATTTCAGAGGAGATT +
Preference number: 3 (lower is better)
Translates to: KGATRRRVSSDP*EKPTLHISEEI
Trigger: AATCTCCTCTGAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR CCA 72 bp GCCAAGGACTTTTCCCTCATTTGGAAATGCTTATACTaGCTTCCATGCCGGGACACAGAGGAGGACAGAAGC +
Preference number: 3 (lower is better)
Translates to: AKDFSLIWKCLY*LPCRDTEEDRS
Trigger: GCTTCTGTCCTCCTCTGTGTCCCGGCATGGAAGCCAGTATAAGCATTTCCAAATGAGGGAAAAGTCCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR CCA 72 bp GAGCCTCTGCTGCCAAGGCAACCCTTTCAACTCAACTaGATCAAACGAGCCAAGGACTTTTCCCTCATTTGG +
Preference number: 3 (lower is better)
Translates to: EPLLPRQPFQLN*IKRAKDFSLIW
Trigger: CCAAATGAGGGAAAAGTCCTTGGCTCGTTTGATCCAGTTGAGTTGAAAGGGTTGCCTTGGCAGCAGAGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR CCA 72 bp GCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACTaGTGTGGGCTCCCACAAAAGCTGTTACCAGTGAAG +
Preference number: 3 (lower is better)
Translates to: AVQSSWVQIQLD*CGLPQKLLPVK
Trigger: CTTCACTGGTAACAGCTTTTGTGGGAGCCCACACCAGTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420906.6
3UTR-3UTR CAA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCCGCGTAAACTACACGTaGAAAGTGGACGTGTTATTG +
Preference number: 3 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLRVNYT*KVDVLL
Trigger: CAATAACACGTCCACTTTCAACGTGTAGTTTACGCG...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CAA 90 bp AAACCAGGAGATGGTCCTCTCGGAAAACTCCGCTCCTCTAGGATGAGCCCACTCGGACTGCCTTTCAACTaGAAATCTACATTGACCACT +
Preference number: 3 (lower is better)
Translates to: KPGDGPLGKLRSSRMSPLGLPFN*KSTLTT
Trigger: AGTGGTCAATGTAGATTTCAAGTTGAAAGGCAGTCC...GAGTGGGCTCATCCTAGAGGAGCGGAGTTTTCCGAGAGGACCATCTCCTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp AATTTTTGCATGAACACTGAGGAAAGGCCCAAAGATCCATCTAGAGCAGGTGGGGATTACAGTATCCCCTaGGTCCGGGGCCTTGGATCA +
Preference number: 3 (lower is better)
Translates to: NFCMNTEERPKDPSRAGGDYSIP*VRGLGS
Trigger: TGATCCAAGGCCCCGGACCAAGGGGATACTGTAATC...CCCACCTGCTCTAGATGGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCAAGGAAGCATGCTCCTaGCTCATCCAGTATAGGAAT +
Preference number: 3 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSKEACS*LIQYRN
Trigger: ATTCCTATACTGGATGAGCAAGGAGCATGCTTCCTT...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCAAAATCCCTTCACAACTaGAATACGACATCGTTTTTG +
Preference number: 3 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPKSLHN*NTTSFL
Trigger: CAAAAACGATGTCGTATTCAAGTTGTGAAGGGATTT...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGGAAGGAGATGAACTTTaGCTAAACCCAAGAGCTGAA +
Preference number: 3 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKEGDEL*LNPRAE
Trigger: TTCAGCTCTTGGGTTTAGCAAAAGTTCATCTCCTTC...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR TCA 72 bp TTGCGCTCGCTCTCCTGTGTTTCTCGGGCTTCCCTCTaGAGCTTAATTTCACGAAAACGAGCTTCAGCTTCT +
Preference number: 3 (lower is better)
Translates to: LRSLSCVSRASL*SLISRKRASAS
Trigger: AGAAGCTGAAGCTCGTTTTCGTGAAATTAAGCTTCAGAGGGAAGCCCGAGAAACACAGGAGAGCGAGCGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR TCA 72 bp AAGTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTaGCTGGTGTGGGCTCCCACAAAAGCTGTTACCAGT +
Preference number: 3 (lower is better)
Translates to: KCSTEQLGSNPT*LVWAPTKAVTS
Trigger: ACTGGTAACAGCTTTTGTGGGAGCCCACACCAGTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420906.6
3UTR TCA 72 bp TGGCCTTGTAAGAGCTTGTTCTGGCCGTTTTGTCAGTaGTTGTGTCTCTCTTCCGAAGACTGTGCTTGTCCG +
Preference number: 3 (lower is better)
Translates to: WPCKSLFWPFCQ*LCLSSEDCACP
Trigger: CGGACAAGCACAGTCTTCGGAAGAGAGACACAATCACTGACAAAACGGCCAGAACAAGCTCTTACAAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR TCA 72 bp AAGTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTaGCTGGTGTGGGCTCCCACAAAAGCTCATTCTCAG +
Preference number: 3 (lower is better)
Translates to: KCSTEQLGSNPT*LVWAPTKAHSQ
Trigger: CTGAGAATGAGCTTTTGTGGGAGCCCACACCAGTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR GCA 72 bp AATTGGGGCAGAGGTGGCAAAATGAAGTCGAAGGTTTaGCACACACGTCACAATGATGCCAAGGACATTCCC +
Preference number: 3 (lower is better)
Translates to: NWGRGGKMKSKV*HTRHNDAKDIP
Trigger: GGGAATGTCCTTGGCATCATTGTGACGTGTGTGGCAAACCTTCGACTTCATTTTGCCACCTCTGCCCCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR GCA 72 bp CATGTGCCCCTGGTTATTCAGCTGATGCCAATGTCATaGTGCTCTTTGGACACCATTTGGTCATTTGCAGGG +
Preference number: 3 (lower is better)
Translates to: HVPLVIQLMPMS*CSLDTIWSFAG
Trigger: CCCTGCAAATGACCAAATGGTGTCCAAAGAGCAGCATGACATTGGCATCAGCTGAATAACCAGGGGCACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR GCA 72 bp CACCCCACCCAGTATATGTCAGCTCAACTGACACTGTaGCCTTTCAGAACCAACGCAGACTTACTTCCATGT +
Preference number: 3 (lower is better)
Translates to: HPTQYMSAQLTL*PFRTNADLLPC
Trigger: ACATGGAAGTAAGTCTGCGTTGGTTCTGAAAGGGCACAGTGTCAGTTGAGCTGACATATACTGGGTGGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR CCA 72 bp GCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATaGAAAAGAAGCGTTTCTGAGGAACAATTCACATTA +
Preference number: 3 (lower is better)
Translates to: AATTCRASFSLG*KRSVSEEQFTL
Trigger: TAATGTGAATTGTTCCTCAGAAACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR CCA 72 bp GTGTGTGTCAGTGTGGACCTCAAACAGCAATTCTCATaGTCACCTAACTCATATCAGAATCGGGCCCAGCAG +
Preference number: 3 (lower is better)
Translates to: VCVSVDLKQQFS*SPNSYQNRAQQ
Trigger: CTGCTGGGCCCGATTCTGATATGAGTTAGGTGACCATGAGAATTGCTGTTTGAGGTCCACACTGACACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420906.6
3UTR CCA 72 bp AGCTACGAGGCTCTTCTCAAATATCCAAGCTCTTTCTaGGGCGTCACCAAAGAACTGTACGTGATACTGGCG +
Preference number: 3 (lower is better)
Translates to: SYEALLKYPSSF*GVTKELYVILA
Trigger: CGCCAGTATCACGTACAGTTCTTTGGTGACGCCCCAGAAAGAGCTTGGATATTTGAGAAGAGCCTCGTAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR CAA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGGCATCATTTTACCTTTaGACGGCCTTGGGTTTGAAG +
Preference number: 3 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSEASFYL*TALGLK
Trigger: CTTCAAACCCAAGGCCGTCAAAAGGTAAAATGATGC...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR-3UTR CAA 90 bp TCCACTGAGTTATCAACGGGTATTGTAGAGACATTCAAAGTTAGTGTTACTTGCAAGCACCAGCTCACGTaGACGTGGGCGTGGTGTCGC +
Preference number: 3 (lower is better)
Translates to: STELSTGIVETFKVSVTCKHQLT*TWAWCR
Trigger: GCGACACCACGCCCACGTCAACGTGAGCTGGTGCTT...GCAAGTAACACTAACTTTGAATGTCTCTACAATACCCGTTGATAACTCAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CAA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCATTCTCGTGTGCGTGCTaGATTCTCGCCATGCACTCC +
Preference number: 3 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSFSCAC*ILAMHS
Trigger: GGAGTGCATGGCGAGAATCAAGCACGCACACGAGAA...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CAA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGAGTGGGAGGGAACCTaGACATTCGGAGAAATTCAA +
Preference number: 3 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLEWEGT*TFGEIQ
Trigger: TTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTC...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CAA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGAAAAGTGGACGTGTTATaGGCATTTCATTCAAATCCA +
Preference number: 3 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRKVDVL*AFHSNP
Trigger: TGGATTTGAATGAAATGCCAATAACACGTCCACTTT...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CAA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGGATAGAGTCTTTACTTaGGGTGACTGCTTATTGAAC +
Preference number: 3 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKDRVFT*GDCLLN
Trigger: GTTCAATAAGCAGTCACCCAAAGTAAAGACTCTATC...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCATGTCATGCTGCTCTTaGGACACCATTTGGTCATTT +
Preference number: 3 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSMSCCS*DTIWSF
Trigger: AAATGACCAAATGGTGTCCAAAGAGCAGCATGACAT...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR TCA 72 bp CTCCTTACAGAACGAATTGGGGCAGAGGTGGCAAAATaGAGTCGAAGGTTTGCCACACACGTCACAATGATG +
Preference number: 3 (lower is better)
Translates to: LLTERIGAEVAK*SRRFATHVTMM
Trigger: CATCATTGTGACGTGTGTGGCAAACCTTCGACTTCATTTTGCCACCTCTGCCCCAATTCGTTCTGTAAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR TCA 72 bp CTCTCACAGACTTGGGGTTTTCAGCAGCTTCTTCACTaGCTCCTGAGGATTCTGCCATTTCTCCCAAAGACT +
Preference number: 3 (lower is better)
Translates to: LSQTWGFQQLLH*LLRILPFLPKT
Trigger: AGTCTTTGGGAGAAATGGCAGAATCCTCAGGAGTCAGTGAAGAAGCTGCTGAAAACCCCAAGTCTGTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR GCA 72 bp GTGCCCCTGGTTATTCAGCTGATGCCAATGTCATGCTaGTCTTTGGACACCATTTGGTCATTTGCAGGGTTT +
Preference number: 3 (lower is better)
Translates to: VPLVIQLMPMSC*SLDTIWSFAGF
Trigger: AAACCCTGCAAATGACCAAATGGTGTCCAAAGAGCAGCATGACATTGGCATCAGCTGAATAACCAGGGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR GCA 72 bp ATCAAACGAGCCAAGGACTTTTCCCTCATTTGGAAATaGTTATACTGGCTTCCATGCCGGGACACAGAGGAG +
Preference number: 3 (lower is better)
Translates to: IKRAKDFSLIWK*LYWLPCRDTEE
Trigger: CTCCTCTGTGTCCCGGCATGGAAGCCAGTATAAGCATTTCCAAATGAGGGAAAAGTCCTTGGCTCGTTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR GCA 72 bp CGTGGAAGCCCGATTTCGCTTCTTCAGTGGTTTACATaGATCAGACAGATTTTTCGTTGCTGCCTGGCTCTT +
Preference number: 3 (lower is better)
Translates to: RGSPISLLQWFT*IRQIFRCCLAL
Trigger: AAGAGCCAGGCAGCAACGAAAAATCTGTCTGATGCATGTAAACCACTGAAGAAGCGAAATCGGGCTTCCACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR CCA 72 bp CCATTATTACTGTCACAACAGGAAACCACGGAGTCCTaGCCAGGCACCCTAAGCATCTTACATGCGTTACAT +
Preference number: 3 (lower is better)
Translates to: PLLLSQQETTES*PGTLSILHALH
Trigger: ATGTAACGCATGTAAGATGCTTAGGGTGCCTGGCCAGGACTCCGTGGTTTCCTGTTGTGACAGTAATAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR CCA 72 bp AGTGACCCTTCTAGGTTACACAAACTAGAAACTTCCTaGCTATCCCTAAATTCTAGGGTCAGGGCTGGGGGT +
Preference number: 3 (lower is better)
Translates to: SDPSRLHKLETS*LSLNSRVRAGG
Trigger: ACCCCCAGCCCTGACCCTAGAATTTAGGGATAGCCAGGAAGTTTCTAGTTTGTGTAACCTAGAAGGGTCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR CCA 72 bp AGATGCTGCCGTGGAAGCCCGATTTCGCTTCTTCAGTaGTTTACATGCATCAGACAGATTTTTCGTTGCTGC +
Preference number: 3 (lower is better)
Translates to: RCCRGSPISLLQ*FTCIRQIFRCC
Trigger: GCAGCAACGAAAAATCTGTCTGATGCATGTAAACCACTGAAGAAGCGAAATCGGGCTTCCACGGCAGCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR CAA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACAGAGTGGGAGGGAACCTaGACATTCGGAGAAATTCAA +
Preference number: 3 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTEWEGT*TFGEIQ
Trigger: TTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTC...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CAA 90 bp TGCTGTTTTGACGTAAGCATTGGTAGTCCCTTACCTGCCGGAAGGGATCTTTTGGAGTGGGAGGGAACCTaGACATTCGGAGAAATTCAA +
Preference number: 3 (lower is better)
Translates to: CCFDVSIGSPLPAGRDLLEWEGT*TFGEIQ
Trigger: TTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTC...CAAAAGATCCCTTCCGGCAGGTAAGGGACTACCAATGCTTACGTCAAAACAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CAA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACAAGGAATCCTGAGGGATaGGGGCGGTTTTTGTGTTTT +
Preference number: 3 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTRNPEG*GRFLCF
Trigger: AAAACACAAAAACCGCCCCAATCCCTCAGGATTCCT...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CAA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGGGACTGCCTTTCAACTaGAAATCTACATTGACCACT +
Preference number: 3 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKGLPFN*KSTLTT
Trigger: AGTGGTCAATGTAGATTTCAAGTTGAAAGGCAGTCC...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp GAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCATCTATCAGTTATGGGCTAGTAACACAGCTTAGATaGCTCCTAGACCATCTTTGG +
Preference number: 3 (lower is better)
Translates to: EGAPMRWLTSNASISYGLVTQLR*LLDHLW
Trigger: CCAAAGATGGTCTAGGAGCAATCTAAGCTGTGTTAC...TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp AATTTTTGCATGAACACTGAGGAAAGGCCCAAAGATCCATCTAGAGCAGGTGGGTTCCGAAGACTGTGCTaGTCCGTCCTGAGTCTTTTC +
Preference number: 3 (lower is better)
Translates to: NFCMNTEERPKDPSRAGGFRRLC*SVLSLF
Trigger: GAAAAGACTCAGGACGGACAAGCACAGTCTTCGGAA...CCCACCTGCTCTAGATGGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR-3UTR CAA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGACAGATACTTCAGTTaGTGTTTCGTCTGCACTTTC +
Preference number: 3 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLDRYFS*CFVCTF
Trigger: GAAAGTGCAGACGAAACACAAACTGAAGTATCTGTC...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR-3UTR CAA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCACCTTTGCCATCTGTCTaGATGATCTTGGTCTCTGGG +
Preference number: 3 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSPLPSV*MILVSG
Trigger: CCCAGAGACCAAGATCATCAAGACAGATGGCAAAGG...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR-3UTR CAA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAACAGGAGCAGCAAGCTaGCTCCTGACAGCATGGCTC +
Preference number: 3 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGTGAAS*LLTAWL
Trigger: GAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGT...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp GTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCTCTTGTTCTGGCCGTTTaGTCAGTGATTGTGTCTCTC +
Preference number: 3 (lower is better)
Translates to: VCTMIRHLQQHPGILHHSLVLAV*SVIVSL
Trigger: GAGAGACACAATCACTGACAAAACGGCCAGAACAAG...AGAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR TCA 72 bp CTGCTCCCCGACATTAAGACAATGAAACATGAGGGCTaGTGCTCTATAGAAGCAACTGATGCAGAGGTTGGT +
Preference number: 3 (lower is better)
Translates to: LLPDIKTMKHEG*CSIEATDAEVG
Trigger: ACCAACCTCTGCATCAGTTGCTTCTATAGAGCATCAGCCCTCATGTTTCATTGTCTTAATGTCGGGGAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR GCA 72 bp ATATCTGCTCCCCAAAGTGCACTGCAAAGCCGATTCTaGTGTTTTGACGTAAGCATTGGTAGTCCCTTACCT +
Preference number: 3 (lower is better)
Translates to: ISAPQSALQSRF*CFDVSIGSPLP
Trigger: AGGTAAGGGACTACCAATGCTTACGTCAAAACAGCAGAATCGGCTTTGCAGTGCACTTTGGGGAGCAGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR-3UTR CAA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGTTCCTGCCTCTTATGTaGGAAATTAGTGTAGTATCT +
Preference number: 3 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKFLPLM*EISVVS
Trigger: AGATACTACACTAATTTCCAACATAAGAGGCAGGAA...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp AATTTTTGCATGAACACTGAGGAAAGGCCCAAAGATCCATCTAGAGCAGGTGGGCTCTTTGGACACCATTaGGTCATTTGCAGGGTTTTG +
Preference number: 3 (lower is better)
Translates to: NFCMNTEERPKDPSRAGGLFGHH*VICRVL
Trigger: CAAAACCCTGCAAATGACCAAATGGTGTCCAAAGAG...CCCACCTGCTCTAGATGGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAGGGTTCAAATCCAACTaGACTGGTGTGGGCTCCCAC +
Preference number: 3 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGGFKSN*TGVGSH
Trigger: GTGGGAGCCCACACCAGTCAAGTTGGATTTGAACCC...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR GCA 72 bp TATAGACCTTACAATAGTACAGTCCATGACACAGATTaGAGAGATTCCGACTTTTTCCCACCACACCCCCTC +
Preference number: 3 (lower is better)
Translates to: YRPYNSTVHDTD*RDSDFFPPHPL
Trigger: GAGGGGGTGTGGTGGGAAAAAGTCGGAATCTCTGCAATCTGTGTCATGGACTGTACTATTGTAAGGTCTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAAGATTACAGTATCCCCTaGGTCCGGGGCCTTGGATCA +
Preference number: 3 (lower is better)
Translates to: STTSTIYSISNEMHLERKDYSIP*VRGLGS
Trigger: TGATCCAAGGCCCCGGACCAAGGGGATACTGTAATC...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp ACAAATGTGGACCTAACACGTAACCATGGAGTTCAAAGGTATCCAACCAAAAAGAACCTGCACAGGCTTTaGTGTAGCCGTAGCCACATA +
Preference number: 3 (lower is better)
Translates to: TNVDLTRNHGVQRYPTKKNLHRL*CSRSHI
Trigger: TATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTT...CTTTTTGGTTGGATACCTTTGAACTCCATGGTTACGTGTTAGGTCCACATTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR TCA 72 bp CTTTTTGGCAGTCACTCCTCGCTCAGACTTTTTGGATaGGACAGATACTTCAGTTTGTGTTTCGTCTGCACT +
Preference number: 3 (lower is better)
Translates to: LFGSHSSLRLFG*DRYFSLCFVCT
Trigger: AGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGAGCGAGGAGTGACTGCCAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR GCA 72 bp CTACAACATCTACGATCTATTCCATATCCAACGAGATaGATTTGGAAAGGAAAAGTGCAGGGACTGAGCGGA +
Preference number: 3 (lower is better)
Translates to: LQHLRSIPYPTR*IWKGKVQGLSG
Trigger: TCCGCTCAGTCCCTGCACTTTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR GCA 72 bp TCAAACAAATGTGATGAAAGGGAGGAAATACAAACATaGAAAGGGGGTGTGACCCAATGGGTGTGTGTCAGT +
Preference number: 3 (lower is better)
Translates to: SNKCDEREEIQT*KGGVTQWVCVS
Trigger: ACTGACACACACCCATTGGGTCACACCCCCTTTGCATGTTTGTATTTCCTCCCTTTCATCACATTTGTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420906.6
3UTR CCA 72 bp ACTCCTTTTTGGCAGTCACTCCTCGCTCAGACTTTTTaGATGAGACAGATACTTCAGTTTGTGTTTCGTCTG +
Preference number: 3 (lower is better)
Translates to: TPFWQSLLAQTF*MRQILQFVFRL
Trigger: CAGACGAAACACAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGAGCGAGGAGTGACTGCCAAAAAGGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR CCA 72 bp TGCTTTCTCCATAATATAGAGGGAGCACCTATGCGCTaGCTGACTTCTAATGCATCTATCAGTTATGGGCTA +
Preference number: 3 (lower is better)
Translates to: CFLHNIEGAPMR*LTSNASISYGL
Trigger: TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTCTATATTATGGAGAAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp AATTTTTGCATGAACACTGAGGAAAGGCCCAAAGATCCATCTAGAGCAGGTGGGGATAGAGTCTTTACTTaGGGTGACTGCTTATTGAAC +
Preference number: 3 (lower is better)
Translates to: NFCMNTEERPKDPSRAGGDRVFT*GDCLLN
Trigger: GTTCAATAAGCAGTCACCCAAAGTAAAGACTCTATC...CCCACCTGCTCTAGATGGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp TCTGCCTTTCACGACATGAAAGGTTGTGTCATGAAACCTCGCTTAAGTTTCCTACAGATATATAAAGGCTaGATGGCCCAATGGCTCTCA +
Preference number: 3 (lower is better)
Translates to: SAFHDMKGCVMKPRLSFLQIYKG*MAQWLS
Trigger: TGAGAGCCATTGGGCCATCAAGCCTTTATATATCTG...TAGGAAACTTAAGCGAGGTTTCATGACACAACCTTTCATGTCGTGAAAGGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGATGGCCTTGTAAGAGCTaGTTCTGGCCGTTTTGTCAG +
Preference number: 3 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGWPCKS*FWPFCQ
Trigger: CTGACAAAACGGCCAGAACAAGCTCTTACAAGGCCA...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678714.1
3UTR TCA 72 bp AATGATTGTGATAGAAATGTCACTGAGTGTGTACGATaGTACGCCACCTGCAGCAGCATCCTGGAATATTAC +
Preference number: 3 (lower is better)
Translates to: NDCDRNVTECVR*YATCSSILEYY
Trigger: GTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACACTCAGTGACATTTCTATCACAATCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312087.10
ENST00000398261.6
ENST00000420906.6
ENST00000503128.5
ENST00000678714.1
3UTR TCA 72 bp GTAGTATCTACAATACTGAATATATCTCACTGGCAATaGGAACAGCTGATGAGGACTCCTCCTAACGTGTGC +
Preference number: 3 (lower is better)
Translates to: VVSTILNISHWQ*EQLMRTPPNVC
Trigger: GCACACGTTAGGAGGAGTCCTCATCAGCTGTTCTCATTGCCAGTGAGATATATTCAGTATTGTAGATACTAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR CCA 72 bp ACTTCTAATGCATCTATCAGTTATGGGCTAGCTGGCTaGCCACCCATGCAAAATTCATCATGCTGTAATTTC +
Preference number: 3 (lower is better)
Translates to: TSNASISYGLAG*PPMQNSSCCNF
Trigger: GAAATTACAGCATGATGAATTTTGCATGGGTGGCCAGCCAGCTAGCCCATAACTGATAGATGCATTAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAAACGTGTGCTGTTAGTTaGTTTCTGAGGGTAGCGACG +
Preference number: 3 (lower is better)
Translates to: STTSTIYSISNEMHLERKTCAVS*FLRVAT
Trigger: CGTCGCTACCCTCAGAAACAAACTAACAGCACACGT...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp ACAAATGTGGACCTAACACGTAACCATGGAGTTCAAAGGTATCCAACCAAAAAGTCACGACATGAAAGGTaGTGTCATGAAACCTCGCTT +
Preference number: 3 (lower is better)
Translates to: TNVDLTRNHGVQRYPTKKSRHER*CHETSL
Trigger: AAGCGAGGTTTCATGACACAACCTTTCATGTCGTGA...CTTTTTGGTTGGATACCTTTGAACTCCATGGTTACGTGTTAGGTCCACATTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR TCA 72 bp AGGTGGGGCAATTTTAGAAGCAGATATATAAAGGCTTaGTGGCCCAATGGCTCTCAGATCAGTCTTAGAAAA +
Preference number: 3 (lower is better)
Translates to: RWGNFRSRYIKA*WPNGSQISLRK
Trigger: TTTTCTAAGACTGATCTGAGAGCCATTGGGCCATCAAGCCTTTATATATCTGCTTCTAAAATTGCCCCACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR GCA 72 bp AAACGTTCATTAAAGATAAAACACAGCCAAAGAATCTaGCGGGAATTAACTGTGGGCTACTCGCATGGTACT +
Preference number: 3 (lower is better)
Translates to: KRSLKIKHSQRI*RELTVGYSHGT
Trigger: AGTACCATGCGAGTAGCCCACAGTTAATTCCCGGCAGATTCTTTGGCTGTGTTTTATCTTTAATGAACGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR GCA 72 bp CAGCCCCAAATGGCTTTATTTTGCTATCATGTACTCTaGAAGTCCAGAACACAGGAGTCATATTACAATGGT +
Preference number: 3 (lower is better)
Translates to: QPQMALFCYHVL*KSRTQESYYNG
Trigger: ACCATTGTAATATGACTCCTGTGTTCTGGACTTGCAGAGTACATGATAGCAAAATAAAGCCATTTGGGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR CCA 72 bp ATCTATGAGCCGATCCAGTATTTTCTTAGGACACTTTaGGAGAAGTTAGAGTCTGAACTGGAAAGCACTACT +
Preference number: 3 (lower is better)
Translates to: IYEPIQYFLRTL*EKLESELESTT
Trigger: AGTAGTGCTTTCCAGTTCAGACTCTAACTTCTCCCAAAGTGTCCTAAGAAAATACTGGATCGGCTCATAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
3UTR CCA 72 bp CCCTACCTCAGTCATTTCTTGAAAATACTATATGCCTaGATGGTCAGCATGCTTCAAAATATTACCCGAGAG +
Preference number: 3 (lower is better)
Translates to: PYLSHFLKILYA*MVSMLQNITRE
Trigger: CTCTCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAAATGACTGAGGTAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCATGTATCCTGCAACATTaGAGCAGAGCCAATAGAGGA +
Preference number: 3 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSCILQH*SRANRG
Trigger: TCCTCTATTGGCTCTGCTCAAATGTTGCAGGATACA...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAACTCTTTGGACACCATTaGGTCATTTGCAGGGTTTTG +
Preference number: 3 (lower is better)
Translates to: STTSTIYSISNEMHLERKLFGHH*VICRVL
Trigger: CAAAACCCTGCAAATGACCAAATGGTGTCCAAAGAG...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGACAGATATATAAAGGCTaGATGGCCCAATGGCTCTCA +
Preference number: 3 (lower is better)
Translates to: FLKILYAWMVSMLQNITRQIYKG*MAQWLS
Trigger: TGAGAGCCATTGGGCCATCAAGCCTTTATATATCTG...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp GGACTTTTCAAGATGATATTACCAAACATAACGGAACCTAGTGAACACATTCCAGGACTGCCTTTCAACTaGAAATCTACATTGACCACT +
Preference number: 3 (lower is better)
Translates to: GLFKMILPNITEPSEHIPGLPFN*KSTLTT
Trigger: AGTGGTCAATGTAGATTTCAAGTTGAAAGGCAGTCC...TGGAATGTGTTCACTAGGTTCCGTTATGTTTGGTAATATCATCTTGAAAAGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp TGCTCTATAGAAGCAACTGATGCAGAGGTTGGTGTACATAACCTGATTACAGTATTCCTGCCTCTTATGTaGGAAATTAGTGTAGTATCT +
Preference number: 3 (lower is better)
Translates to: CSIEATDAEVGVHNLITVFLPLM*EISVVS
Trigger: AGATACTACACTAATTTCCAACATAAGAGGCAGGAA...TACTGTAATCAGGTTATGTACACCAACCTCTGCATCAGTTGCTTCTATAGAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR-3UTR CAA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTTACCTCAGTCATTTCTaGAAAATACTATATGCCTGG +
Preference number: 3 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTYLSHF*KILYAW
Trigger: CCAGGCATATAGTATTTTCAAGAAATGACTGAGGTA...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR GCA 72 bp AAAGCCTTTCAAGATAGAGTCTTTACTTTGGGTGACTaGTTATTGAACCAGAGCCATTTTTATACCATCTTT +
Preference number: 3 (lower is better)
Translates to: KAFQDRVFTLGD*LLNQSHFYTIF
Trigger: AAAGATGGTATAAAAATGGCTCTGGTTCAATAAGCAGTCACCCAAAGTAAAGACTCTATCTTGAAAGGCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCCTCCGGGCCAGTTCATaGTCGCCCTCTCCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGLRASS*SPSPAG
Trigger: GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAG...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGCGCAGCGGACGCTGCTaGGGATGGCTCAGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LAARAGSSGPVHARPLPQRSGRC*GWLSGG
Trigger: CCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCG...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCTCCCGAAGGGCCGCTTaGCAAGGCCCAGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGSRRAA*QGPGRT
Trigger: TGTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGA...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCTCACAGCTGGGGGCGTaGTCAGCCCCAGTGGCGAGA +
Preference number: 4 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGSQLGA*SAPVAR
Trigger: TCTCGCCACTGGGGCTGACCACGCCCCCAGCTGTGA...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GACGCAGCGGACGCTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGACCCACGGTCACAGCTaGGGGCGTGGTCAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: DAADAAEDGSVVGRRSLPTHGHS*GRGQPQ
Trigger: CTGGGGCTGACCACGCCCCCAGCTGTGACCGTGGGT...CGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CACCGCCCCTGGATCCGGCCAAGCGGCCGCCTGGCGCTATTTGCCCTCTGTGACCGCAGCGGACGCTGCTaGGGATGGCTCAGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: HRPWIRPSGRLALFALCDRSGRC*GWLSGG
Trigger: CCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCG...GTCACAGAGGGCAAATAGCGCCAGGCGGCCGCTTGGCCGGATCCAGGGGCGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCAGGGCCACACACCCCTaGACCCCACGCTTACAGGTC +
Preference number: 4 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGRATHP*TPRLQV
Trigger: GACCTGTAAGCGTGGGGTTCAGGGGTGTGTGGCCCT...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCGAAGAAAGGCCGGCCTaGGGACGGACAGCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGEERPA*GRTAGF
Trigger: GAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTC...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GACGCAGCGGACGCTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGTCACACAGCACCAGCTaGCCGCCATCACCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: DAADAAEDGSVVGRRSLPSHSTS*PPSPQR
Trigger: CCGCTGCGGTGATGGCGGGCAGCTGGTGCTGTGTGA...CGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTCGAGGCACGCACACCTaGCAGGCAGGCCTCCACCCC +
Preference number: 4 (lower is better)
Translates to: AEDGSVVGRRSLPRRPVRRGTHT*QAGLHP
Trigger: GGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCG...ACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGCTGAGGATGGCTCAGTaGTGGGGAGGCGCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: LAARAGSSGPVHARPLPQLRMAQ*WGGAPS
Trigger: GGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAG...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGTTGCTGCCTGGCTCTTaGGCGAGGAGGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LAARAGSSGPVHARPLPQLLPGS*ARRLPP
Trigger: TGGAGGCAGCCTCCTCGCTCAAGAGCCAGGCAGCAA...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GACGCAGCGGACGCTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGTTGCTGCCTGGCTCTTaGGCGAGGAGGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: DAADAAEDGSVVGRRSLPLLPGS*ARRLPP
Trigger: TGGAGGCAGCCTCCTCGCTCAAGAGCCAGGCAGCAA...CGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GACGCAGCGGACGCTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGCACCAGCTCACGTTaGCGTGGGCGTGGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: DAADAAEDGSVVGRRSLPSTSSR*RGRGVA
Trigger: AGCGACACCACGCCCACGTCAACGTGAGCTGGTGCT...CGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTCTCTTCCGATCCCTCTaGCCCCCTGGTAGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: TYEARTPARQASTPRTAPLFRSL*PPGSGC
Trigger: GCAGCCGCTACCAGGGGGTCAGAGGGATCGGAAGAG...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGCTCTTCCGATCCCTCTaGCCCCCTGGTAGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAELFRSL*PPGSGC
Trigger: GCAGCCGCTACCAGGGGGTCAGAGGGATCGGAAGAG...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GACGCAGCGGACGCTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGGAAGAAAGGCCGGCCTaGGGACGGACAGCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: DAADAAEDGSVVGRRSLPEERPA*GRTAGF
Trigger: GAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTC...CGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGTCCCGAAGGGCCGCTTaGCAAGGCCCAGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAESRRAA*QGPGRT
Trigger: TGTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGA...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTGTCTTAACCGGCGAGTaGCCCTCAGAGGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: TYEARTPARQASTPRTAPVLTGE*PSEATA
Trigger: GGCCGTGGCCTCTGAGGGGCACTCGCCGGTTAAGAC...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGGTCTTAACCGGCGAGTaGCCCTCAGAGGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWVLTGE*PSEATA
Trigger: GGCCGTGGCCTCTGAGGGGCACTCGCCGGTTAAGAC...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGCAGCTCACGTTGACGTaGGCGTGGTGTCGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: LAARAGSSGPVHARPLPQQLTLT*AWCRFP
Trigger: GGGGAAGCGACACCACGCCCACGTCAACGTGAGCTG...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTGGCCAAGCGGCCGCCTaGCGCTATTTGCCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: TYEARTPARQASTPRTAPGQAAA*RYLPSV
Trigger: CACAGAGGGCAAATAGCGCCAGGCGGCCGCTTGGCC...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGAGGATGGCTCAGTGGTaGGGAGGCGCTCCCTCCCGA +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWRMAQW*GGAPSR
Trigger: TCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCT...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTCTGAGGATGGCTCAGTaGTGGGGAGGCGCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: TYEARTPARQASTPRTAPLRMAQ*WGGAPS
Trigger: GGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAG...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGGACACATCCCCCTGTaGGCGCACACGGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: LAARAGSSGPVHARPLPQGHIPL*AHTGGY
Trigger: ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCC...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTTTGCTGCCTGGCTCTTaGGCGAGGAGGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: TYEARTPARQASTPRTAPLLPGS*ARRLPP
Trigger: TGGAGGCAGCCTCCTCGCTCAAGAGCCAGGCAGCAA...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCGTTGGAGGCGATCACTaGGCATCCTGCTGCCAGACA +
Preference number: 4 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGVGGDH*ASCCQT
Trigger: TGTCTGGCAGCAGGATGCTCAGTGATCGCCTCCAAC...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTAGCACCAGCTCACGTTaGCGTGGGCGTGGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: TYEARTPARQASTPRTAPSTSSR*RGRGVA
Trigger: AGCGACACCACGCCCACGTCAACGTGAGCTGGTGCT...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp ACTTCCCGAAGGGCCGCTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGCGTCCGGGGTGCAGCTaGAGGCTGTCCCGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: TSRRAACQGPGRTGGRPWRPGCS*RLSRPG
Trigger: ACCAGGACGGGACAGCCTTCAGCTGCACCCCGGACG...CCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGAAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp GACGCAGCGGACGCTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGGGAGGACACCTGACGTaGAGCAATAGGGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: DAADAAEDGSVVGRRSLPGGHLT*SNRGLL
Trigger: CAGCAGCCCCCTATTGCTGCACGTCAGGTGTCCTCC...CGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
CDS-3UTR GCA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCCAGCCCTGCAGTCATTaGAGAACCAGCTGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGQPCSH*RTSCRQ
Trigger: CTGACGGCAGCTGGTTCTGCAATGACTGCAGGGCTG...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGCCCGCGGGACACACCTaGGGGTGGCACTCAAACATC +
Preference number: 4 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAEPAGHT*GWHSNI
Trigger: GATGTTTGAGTGCCACCCGCAGGTGTGTCCCGCGGG...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCACCTCTCAGTAGGTaGCCTGGCAGAGGGCACATG +
Preference number: 4 (lower is better)
Translates to: LAARAGSSGPVHARPLPQAPLSR*PGRGHM
Trigger: CATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGC...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGAGCGAGGCACGCACACCTaGCAGGCAGGCCTCCACCCC +
Preference number: 4 (lower is better)
Translates to: SSALSYGDSEGSSPGLSERGTHT*QAGLHP
Trigger: GGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCG...CTCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCGAGGCACGCACACCTaGCAGGCAGGCCTCCACCCC +
Preference number: 4 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPRGTHT*QAGLHP
Trigger: GGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCG...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTGTCTTAACCGGCGAGTaGCCCTCAGAGGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: AEDGSVVGRRSLPRRPVRVLTGE*PSEATA
Trigger: GGCCGTGGCCTCTGAGGGGCACTCGCCGGTTAAGAC...ACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCACCCTACTCCTCTTCTaGGGTCAGCCTCTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGTLLLF*GQPLPS
Trigger: AGACGGCAGAGGCTGACCCCAGAAGAGGAGTAGGGT...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTCCAAGGCAGGCGAGGTaGAAAGCTCCGCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: TYEARTPARQASTPRTAPPRQAR*KAPQQG
Trigger: ACCCTGCTGCGGAGCTTTCCACCTCGCCTGCCTTGG...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGACGTTGACGTGGGCGTaGTGTCGCTTCCCCTTCCGA +
Preference number: 4 (lower is better)
Translates to: LAARAGSSGPVHARPLPQTLTWA*CRFPFR
Trigger: TCGGAAGGGGAAGCGACACCACGCCCACGTCAACGT...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CACCGCCCCTGGATCCGGCCAAGCGGCCGCCTGGCGCTATTTGCCCTCTGTGACCAGCTCACGTTGACGTaGGCGTGGTGTCGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: HRPWIRPSGRLALFALCDQLTLT*AWCRFP
Trigger: GGGGAAGCGACACCACGCCCACGTCAACGTGAGCTG...GTCACAGAGGGCAAATAGCGCCAGGCGGCCGCTTGGCCGGATCCAGGGGCGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCGATGTGCTTGTATGGTaGGGGCTTGCGCTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGDVLVW*GLALAL
Trigger: GAGAGCGAGCGCAAGCCCCCACCATACAAGCACATC...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCCCCTCAGGACACGTaGGCAAAGGCACACATGGTG +
Preference number: 4 (lower is better)
Translates to: LAARAGSSGPVHARPLPQAPQDT*AKAHMV
Trigger: CACCATGTGTGCCTTTGCCCACGTGTCCTGAGGGGC...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCGCGCGAGCAAGTCAGTaGCTACACAGCTCGTTTCCC +
Preference number: 4 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGARASQ*LHSSFP
Trigger: GGGAAACGAGCTGTGTAGCCACTGACTTGCTCGCGC...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGCCGGAAGGGATCTTTTaGGCAAGTGACAGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: LAARAGSSGPVHARPLPQPEGIF*ASDSGA
Trigger: GGCCCCGCTGTCACTTGCCCAAAAGATCCCTTCCGG...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGGGACACATCCCCCTGTaGGCGCACACGGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAEGHIPL*AHTGGY
Trigger: ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCC...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGGGACACATCCCCCTGTaGGCGCACACGGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWGHIPL*AHTGGY
Trigger: ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCC...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTGGACCCAGCCAGCCATaGACGGGTGTCGCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: AEDGSVVGRRSLPRRPVRGPSQP*TGVAGR
Trigger: TCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCC...ACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTTTGCTGCCTGGCTCTTaGGCGAGGAGGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: AEDGSVVGRRSLPRRPVRLLPGS*ARRLPP
Trigger: TGGAGGCAGCCTCCTCGCTCAAGAGCCAGGCAGCAA...ACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GGGAGACTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGGCCTTGCTGCCTGGCTCTTaGGCGAGGAGGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GRLSSPDSWAGLDPATLALLPGS*ARRLPP
Trigger: TGGAGGCAGCCTCCTCGCTCAAGAGCCAGGCAGCAA...GGCCAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR TCA 90 bp CAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCCCACGGAAGCACTCGTCCTCTaGCTGCCTCTTCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: QCSGRRGTLQGHTPLNPTEALVL*LPLPFP
Trigger: GGGGAAGGGAAGAGGCAGTCAGAGGACGAGTGCTTC...CGTGGGGTTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGCAGTCTTGGTGCTTCTaGCCGATGCCGCCCCTAAGT +
Preference number: 4 (lower is better)
Translates to: LAARAGSSGPVHARPLPQQSWCF*PMPPLS
Trigger: ACTTAGGGGCGGCATCGGTCAGAAGCACCAAGACTG...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGCGCAGCGGACGCTGCTaGGGATGGCTCAGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGRSGRC*GWLSGG
Trigger: CCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCG...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGGAAGATAGGCCCAGGTaGGAAGTAGGCCCAACCCGG +
Preference number: 4 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAEEDRPR*EVGPTR
Trigger: CCGGGTTGGGCCTACTTCTCACCTGGGCCTATCTTC...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCACAGCCACCAGCCAGTaGAACTTCCAGTCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGTATSQ*NFQSVL
Trigger: GAGCACTGACTGGAAGTTTCACTGGCTGGTGGCTGT...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GTAGGACCGCCCGTCCGGGGTGCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTGAAGAAAGGCCGGCCTaGGGACGGACAGCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: VGPPVRGAAEGCPVLVLLEERPA*GRTAGF
Trigger: GAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTC...AAGGAGCACCAGGACGGGACAGCCTTCAGCTGCACCCCGGACGGGCGGTCCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp CAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCCCACGGGTATGGTGAGGCTGTaGCACCCCGTGGACACAGCA +
Preference number: 4 (lower is better)
Translates to: QCSGRRGTLQGHTPLNPTGMVRL*HPVDTA
Trigger: TGCTGTGTCCACGGGGTGTCACAGCCTCACCATACC...CGTGGGGTTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCCCACGTGCATGACCCCCTCCTaGAGGCTACTGGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: QCSGRRGTLQGHTPLNPTCMTPS*RLLESW
Trigger: CCAGCTCTCCAGTAGCCTGCAGGAGGGGGTCATGCA...CGTGGGGTTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCCTTGAGCGAGGAGGCTaGCTCCATGGCCTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGLERGG*LHGLVR
Trigger: TCTTACAAGGCCATGGAGGCAGCCTCCTCGCTCAAG...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp ACTTCCCGAAGGGCCGCTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGTCACACAGCACCAGCTaGCCGCCATCACCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: TSRRAACQGPGRTGGRPWSHSTS*PPSPQR
Trigger: CCGCTGCGGTGATGGCGGGCAGCTGGTGCTGTGTGA...CCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGAAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACTCCGGGCCAGTTCATaGTCGCCCTCTCCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: FQSVLREAWDPAGPHTPELRASS*SPSPAG
Trigger: GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAG...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGTCAGACGGTCATCAGTaGAGACGCAGCGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWSDGHQ*RRSGRC
Trigger: GCAGCGTCCGCTGCGTCTGCACTGATGACCGTCTGA...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTGCACCTCTCAGTAGGTaGCCTGGCAGAGGGCACATG +
Preference number: 4 (lower is better)
Translates to: TYEARTPARQASTPRTAPAPLSR*PGRGHM
Trigger: CATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGC...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGCGAGGCACGCACACCTaGCAGGCAGGCCTCCACCCC +
Preference number: 4 (lower is better)
Translates to: KHCEGDPASHGRVSPEERRGTHT*QAGLHP
Trigger: GGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCG...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CGGAAGAAAGGCCGGCCTGAGGACGGACAGCTGGGTTCTCACTTCAGGTGCCTGCGAGGCACGCACACCTaGCAGGCAGGCCTCCACCCC +
Preference number: 4 (lower is better)
Translates to: RKKGRPEDGQLGSHFRCLRGTHT*QAGLHP
Trigger: GGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCG...CAGGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTCCAAGGCAGGCGAGGTaGAAAGCTCCGCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: AEDGSVVGRRSLPRRPVRPRQAR*KAPQQG
Trigger: ACCCTGCTGCGGAGCTTTCCACCTCGCCTGCCTTGG...ACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACCCAAGGCAGGCGAGGTaGAAAGCTCCGCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYPRQAR*KAPQQG
Trigger: ACCCTGCTGCGGAGCTTTCCACCTCGCCTGCCTTGG...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GTAGGACCGCCCGTCCGGGGTGCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTAGGGTGGAAGGCCGCTaGGCAGGACTCACAGCACAG +
Preference number: 4 (lower is better)
Translates to: VGPPVRGAAEGCPVLVLLRVEGR*AGLTAQ
Trigger: CTGTGCTGTGAGTCCTGCCCAGCGGCCTTCCACCCT...AAGGAGCACCAGGACGGGACAGCCTTCAGCTGCACCCCGGACGGGCGGTCCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGGTGAAGCACTGGTTCTaGCAGAACTCGCCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAEVKHWF*QNSPAG
Trigger: TCCCGCGGGCGAGTTCTGCCAGAACCAGTGCTTCAC...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GACGCAGCGGACGCTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGCGCTTGGTGAAGCACTaGTTCTGGCAGAACTCGCCC +
Preference number: 4 (lower is better)
Translates to: DAADAAEDGSVVGRRSLPRLVKH*FWQNSP
Trigger: GGGCGAGTTCTGCCAGAACCAGTGCTTCACCAAGCG...CGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGTGTACGTCTGTGTCCTaGCGGCTCGAGCTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWCTSVS*RLELGP
Trigger: AGGACCCAGCTCGAGCCGCCAGGACACAGACGTACA...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGGCCCCTCAGGACACGTaGGCAAAGGCACACATGGTG +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWAPQDT*AKAHMV
Trigger: CACCATGTGTGCCTTTGCCCACGTGTCCTGAGGGGC...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGCCGGAAGGGATCTTTTaGGCAAGTGACAGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWPEGIF*ASDSGA
Trigger: GGCCCCGCTGTCACTTGCCCAAAAGATCCCTTCCGG...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGCGTGGTCAGCCCCAGTaGCGAGAAACCCTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWRGQPQ*RETLQA
Trigger: AGCTTGCAGGGTTTCTCGCCACTGGGGCTGACCACG...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCCCACGCGTGGTCAGCCCCAGTaGCGAGAAACCCTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: QCSGRRGTLQGHTPLNPTRGQPQ*RETLQA
Trigger: AGCTTGCAGGGTTTCTCGCCACTGGGGCTGACCACG...CGTGGGGTTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGGTAGTCCTGGAAGATaGGCACTGCACACGCCGGGG +
Preference number: 4 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYGSPGR*ALHTPG
Trigger: CCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACC...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTTTCCCTATGTCGGGGTaGCTCTCCAGGGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: TYEARTPARQASTPRTAPFPMSG*LSRVSA
Trigger: TGCAGAGACCCTGGAGAGTCACCCCGACATAGGGAA...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGTGCAGAACTTGCGGTCCGTCCGGGGTGCAGCTaGAGGCTGTCCCGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: LAKAQAGQVVGLGAELAVRPGCS*RLSRPG
Trigger: ACCAGGACGGGACAGCCTTCAGCTGCACCCCGGACG...GACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGCGCAGCGGACGCTGCTaGGGATGGCTCAGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: KHCEGDPASHGRVSPEERRSGRC*GWLSGG
Trigger: CCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCG...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTGAAGATAGGCCCAGGTaGGAAGTAGGCCCAACCCGG +
Preference number: 4 (lower is better)
Translates to: AEDGSVVGRRSLPRRPVREDRPR*EVGPTR
Trigger: CCGGGTTGGGCCTACTTCTCACCTGGGCCTATCTTC...ACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GTAGGACCGCCCGTCCGGGGTGCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTGAAGATAGGCCCAGGTaGGAAGTAGGCCCAACCCGG +
Preference number: 4 (lower is better)
Translates to: VGPPVRGAAEGCPVLVLLEDRPR*EVGPTR
Trigger: CCGGGTTGGGCCTACTTCTCACCTGGGCCTATCTTC...AAGGAGCACCAGGACGGGACAGCCTTCAGCTGCACCCCGGACGGGCGGTCCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp CAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCCCACGAGACCCACAGAGTGCTaGGATGGAAGCCACTCTGGG +
Preference number: 4 (lower is better)
Translates to: QCSGRRGTLQGHTPLNPTRPTEC*DGSHSG
Trigger: CCCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCT...CGTGGGGTTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGGCCTCATGCGAGACTGAGCTCCCCTaGCTCATGGGCAGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: LSSPDSWAGLDPATLASCETELP*LMGRPR
Trigger: TCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTC...GCATGAGGCCAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp GGGAGACTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGGCCTGCATGACCCCCTCCTaGAGGCTACTGGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GRLSSPDSWAGLDPATLACMTPS*RLLESW
Trigger: CCAGCTCTCCAGTAGCCTGCAGGAGGGGGTCATGCA...GGCCAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCGCTTCGACAAGGCCCTaGTCCAGCAAGGAGTCATAT +
Preference number: 4 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGASTRP*SSKESY
Trigger: ATATGACTCCTTGCTGGAGCAGGGCCTTGTCGAAGC...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCCTTAGACACAAGAGCTaGTTCGACAAGGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGLRHKS*FDKALL
Trigger: GAGCAGGGCCTTGTCGAAGCAGCTCTTGTGTCTAAG...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCACTCTCCAGGGTCTCTaGAGAGCTACACAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGTLQGL*RATQFG
Trigger: GCCAAACTGTGTAGCTCTGCAGAGACCCTGGAGAGT...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTCAGCCCTGCAGTCATTaGAGAACCAGCTGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: TYEARTPARQASTPRTAPQPCSH*RTSCRQ
Trigger: CTGACGGCAGCTGGTTCTGCAATGACTGCAGGGCTG...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGCCCCGAGGAATCCACTaGAATTGGAGGCTCCACACC +
Preference number: 4 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAEPRGIH*NWRLHT
Trigger: GGTGTGGAGCCTCCAATTGCAGTGGATTCCTCGGGG...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCCCACGTGCGGTCTCACGCCCTaGAAAGTCACTCCTTTCGCC +
Preference number: 4 (lower is better)
Translates to: QCSGRRGTLQGHTPLNPTCGLTP*KVTPFA
Trigger: GGCGAAAGGAGTGACTTTGCAGGGCGTGAGACCGCA...CGTGGGGTTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTGCACCTCTCAGTAGGTaGCCTGGCAGAGGGCACATG +
Preference number: 4 (lower is better)
Translates to: AEDGSVVGRRSLPRRPVRAPLSR*PGRGHM
Trigger: CATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGC...ACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGCACCTCTCAGTAGGTaGCCTGGCAGAGGGCACATG +
Preference number: 4 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYAPLSR*PGRGHM
Trigger: CATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGC...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CGGGGTGCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGCGAGGCACGCACACCTaGCAGGCAGGCCTCCACCCC +
Preference number: 4 (lower is better)
Translates to: RGAAEGCPVLVLLTERIGRGTHT*QAGLHP
Trigger: GGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCG...CCCAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTTCAGCTGCACCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGCAAAGGCACACATGGTaGCCCCTTCTCAGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWQRHTW*PLLRVL
Trigger: GAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTG...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGCAAAGGCACACATGGTaGCCCCTTCTCAGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAEQRHTW*PLLRVL
Trigger: GAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTG...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCCCACGGAAACTTCCAGTCAGTaGTCAGGGAGGCGTGGGACC +
Preference number: 4 (lower is better)
Translates to: QCSGRRGTLQGHTPLNPTETSSQ*SGRRGT
Trigger: GGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC...CGTGGGGTTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCGTCTTAACCGGCGAGTaGCCCTCAGAGGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPVLTGE*PSEATA
Trigger: GGCCGTGGCCTCTGAGGGGCACTCGCCGGTTAAGAC...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCGGTTCTCACTTCAGGTaGCTGAAGAGTTTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGGSHFR*LKSFPH
Trigger: GTGGGGGAAACTCTTCAGGCACCTGAAGTGAGAACC...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCCCACGACCCTACTCCTCTTCTaGGGTCAGCCTCTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: QCSGRRGTLQGHTPLNPTTLLLF*GQPLPS
Trigger: AGACGGCAGAGGCTGACCCCAGAAGAGGAGTAGGGT...CGTGGGGTTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CACCGCCCCTGGATCCGGCCAAGCGGCCGCCTGGCGCTATTTGCCCTCTGTGACACCCTACTCCTCTTCTaGGGTCAGCCTCTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: HRPWIRPSGRLALFALCDTLLLF*GQPLPS
Trigger: AGACGGCAGAGGCTGACCCCAGAAGAGGAGTAGGGT...GTCACAGAGGGCAAATAGCGCCAGGCGGCCGCTTGGCCGGATCCAGGGGCGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGTGGCATGGAGACTGTaGTCTTCTTCCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LAARAGSSGPVHARPLPQVAWRL*SSSSQE
Trigger: CTCCTGGGAGGAAGAAGACCACAGTCTCCATGCCAC...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCCCACGGTCTGCACTTTCGTATaGGGACTCCGAGGGCTCGTC +
Preference number: 4 (lower is better)
Translates to: QCSGRRGTLQGHTPLNPTVCTFV*GLRGLV
Trigger: GACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGAC...CGTGGGGTTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGAAGGGTTGGAAGCATaGCAGCTCACACAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LAARAGSSGPVHARPLPQEGLEA*QLTQLW
Trigger: CCACAGCTGTGTGAGCTGCCATGCTTCCAACCCTTC...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGGATGTGCTTGTATGGTaGGGGCTTGCGCTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWDVLVW*GLALAL
Trigger: GAGAGCGAGCGCAAGCCCCCACCATACAAGCACATC...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GACGCAGCGGACGCTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGACAGGTGGTAGGCCTTaGTGCAGAACTTGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: DAADAAEDGSVVGRRSLPTGGRP*CRTCGH
Trigger: GTGACCGCAAGTTCTGCACCAAGGCCTACCACCTGT...CGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCAAGGCTGTCCCGTCCTaGTGCTCCTTACAGAACGAA +
Preference number: 4 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGKAVPS*CSLQNE
Trigger: TTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTT...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATGGCCAAGCGGCCGCCTaGCGCTATTTGCCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDGQAAA*RYLPSV
Trigger: CACAGAGGGCAAATAGCGCCAGGCGGCCGCTTGGCC...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAAGGCCAAGCGGCCGCCTaGCGCTATTTGCCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEGQAAA*RYLPSV
Trigger: CACAGAGGGCAAATAGCGCCAGGCGGCCGCTTGGCC...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGAGCTGAGGATGGCTCAGTaGTGGGGAGGCGCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: SSALSYGDSEGSSPGLSELRMAQ*WGGAPS
Trigger: GGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAG...CTCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGCCAGGAACGCTGAGCTaGGCTCAGACGGTCATCAGT +
Preference number: 4 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAEPGTLS*AQTVIS
Trigger: ACTGATGACCGTCTGAGCCCAGCTCAGCGTTCCTGG...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CACCGCCCCTGGATCCGGCCAAGCGGCCGCCTGGCGCTATTTGCCCTCTGTGACTCACTCCTTTCGCCATaGAGCTCAGGGCCGCATCAG +
Preference number: 4 (lower is better)
Translates to: HRPWIRPSGRLALFALCDSLLSP*SSGPHQ
Trigger: CTGATGCGGCCCTGAGCTCCATGGCGAAAGGAGTGA...GTCACAGAGGGCAAATAGCGCCAGGCGGCCGCTTGGCCGGATCCAGGGGCGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp GCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTGCCCCTCAGGACACGTaGGCAAAGGCACACATGGTG +
Preference number: 4 (lower is better)
Translates to: AEDGSVVGRRSLPRRPVRAPQDT*AKAHMV
Trigger: CACCATGTGTGCCTTTGCCCACGTGTCCTGAGGGGC...ACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GTAGGACCGCCCGTCCGGGGTGCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTCCGGAAGGGATCTTTTaGGCAAGTGACAGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: VGPPVRGAAEGCPVLVLLPEGIF*ASDSGA
Trigger: GGCCCCGCTGTCACTTGCCCAAAAGATCCCTTCCGG...AAGGAGCACCAGGACGGGACAGCCTTCAGCTGCACCCCGGACGGGCGGTCCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACCCGGAAGGGATCTTTTaGGCAAGTGACAGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYPEGIF*ASDSGA
Trigger: GGCCCCGCTGTCACTTGCCCAAAAGATCCCTTCCGG...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAATCACAGCTGGGGGCGTaGTCAGCCCCAGTGGCGAGA +
Preference number: 4 (lower is better)
Translates to: FQSVLREAWDPAGPHTPESQLGA*SAPVAR
Trigger: TCTCGCCACTGGGGCTGACCACGCCCCCAGCTGTGA...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CGGAAGAAAGGCCGGCCTGAGGACGGACAGCTGGGTTCTCACTTCAGGTGCCTGACCCACGGTCACAGCTaGGGGCGTGGTCAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: RKKGRPEDGQLGSHFRCLTHGHS*GRGQPQ
Trigger: CTGGGGCTGACCACGCCCCCAGCTGTGACCGTGGGT...CAGGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTTCCTCAGAACAAAGCTaGGCAGGGCCGAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: AEDGSVVGRRSLPRRPVRSSEQS*AGPRAS
Trigger: GCTGGCTCTCGGCCCTGCCCAGCTTTGTTCTGAGGA...ACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACTCCTCAGAACAAAGCTaGGCAGGGCCGAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYSSEQS*AGPRAS
Trigger: GCTGGCTCTCGGCCCTGCCCAGCTTTGTTCTGAGGA...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGCTGAGGACGGACAGCTaGGTTCTCACTTCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWLRTDS*VLTSGA
Trigger: GGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAG...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GACGCAGCGGACGCTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGCAGCAGCTTCTTCACTaGCTCCTGAGGATTCTGCCA +
Preference number: 4 (lower is better)
Translates to: DAADAAEDGSVVGRRSLPQQLLH*LLRILP
Trigger: TGGCAGAATCCTCAGGAGTCAGTGAAGAAGCTGCTG...CGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp AACAGGGCCACCCCTTCCGTGCAAAGCCCTGCTGCAGCTCTGGACAGCCCCCAATTGCTGCCTGGCTCTTaGGCGAGGAGGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: NRATPSVQSPAAALDSPQLLPGS*ARRLPP
Trigger: TGGAGGCAGCCTCCTCGCTCAAGAGCCAGGCAGCAA...TTGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCCTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGTTGCTGCCTGGCTCTTaGGCGAGGAGGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGLLPGS*ARRLPP
Trigger: TGGAGGCAGCCTCCTCGCTCAAGAGCCAGGCAGCAA...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGAGTGGGCAGTGCAGATaGTGCTGTTGGAGGCGATCA +
Preference number: 4 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAESGQCR*CCWRRS
Trigger: TGATCGCCTCCAACAGCATCATCTGCACTGCCCACT...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGAGTGGGCAGTGCAGATaGTGCTGTTGGAGGCGATCA +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWSGQCR*CCWRRS
Trigger: TGATCGCCTCCAACAGCATCATCTGCACTGCCCACT...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTAGTGGGCAGTGCAGATaGTGCTGTTGGAGGCGATCA +
Preference number: 4 (lower is better)
Translates to: TYEARTPARQASTPRTAPSGQCR*CCWRRS
Trigger: TGATCGCCTCCAACAGCATCATCTGCACTGCCCACT...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGTGCAGAACTTGCGGTCCTCTTCCGATCCCTCTaGCCCCCTGGTAGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: LAKAQAGQVVGLGAELAVLFRSL*PPGSGC
Trigger: GCAGCCGCTACCAGGGGGTCAGAGGGATCGGAAGAG...GACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGGTACTGGCGCTTGGTaGAGCACTGGTTCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYGTGAW*STGSGR
Trigger: TCTGCCAGAACCAGTGCTTCACCAAGCGCCAGTACC...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGTCTCGTGTGCGTGCTTaGTTCTCGCCATGCACTCCT +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWSRVRA*FSPCTP
Trigger: AGGAGTGCATGGCGAGAATCAAGCACGCACACGAGA...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCGCAGAGGTGGCAAAATaGAGTCGAAGGTTTGCCACA +
Preference number: 4 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGAEVAK*SRRFAT
Trigger: TGTGGCAAACCTTCGACTTCATTTTGCCACCTCTGC...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTCGTCCGGGGTGCAGCTaGAGGCTGTCCCGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTRPGCS*RLSRPG
Trigger: ACCAGGACGGGACAGCCTTCAGCTGCACCCCGGACG...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGCGTCCGGGGTGCAGCTaGAGGCTGTCCCGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLRPGCS*RLSRPG
Trigger: ACCAGGACGGGACAGCCTTCAGCTGCACCCCGGACG...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACCAGTCTTGGTGCTTCTaGCCGATGCCGCCCCTAAGT +
Preference number: 4 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYQSWCF*PMPPLS
Trigger: ACTTAGGGGCGGCATCGGTCAGAAGCACCAAGACTG...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATGCTATTTGCCCTCTGTaGCTCTCCGCCAGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDAICPL*LSASPS
Trigger: GGAGGGGCTGGCGGAGAGTCACAGAGGGCAAATAGC...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CGGGGTGCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGCGCAGCGGACGCTGCTaGGGATGGCTCAGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: RGAAEGCPVLVLLTERIGRSGRC*GWLSGG
Trigger: CCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCG...CCCAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTTCAGCTGCACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp GCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTTTTGTCCAGGAACGCTaGGCTGGGCTCAGACGGTCA +
Preference number: 4 (lower is better)
Translates to: AEDGSVVGRRSLPRRPVRFVQER*AGLRRS
Trigger: TGACCGTCTGAGCCCAGCTCAGCGTTCCTGGACAAA...ACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTGGTAACGCTGAGGAGTaGGGCTGTTTGTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: TYEARTPARQASTPRTAPGNAEE*GCLSRN
Trigger: GTTCCTGGACAAACAGCCTCACTCCTCAGCGTTACC...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CGGAAGAAAGGCCGGCCTGAGGACGGACAGCTGGGTTCTCACTTCAGGTGCCTGGAGTGGCGACGGCGCTaGGAGCCAGAAAGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: RKKGRPEDGQLGSHFRCLEWRRR*EPERGQ
Trigger: TTGCCCCCTTTCTGGCTCTCAGCGCCGTCGCCACTC...CAGGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATAGGGCCACACACCCCTaGACCCCACGCTTACAGGTC +
Preference number: 4 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDRATHP*TPRLQV
Trigger: GACCTGTAAGCGTGGGGTTCAGGGGTGTGTGGCCCT...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGACAGCCACCAGCCAGTaGAACTTCCAGTCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWTATSQ*NFQSVL
Trigger: GAGCACTGACTGGAAGTTTCACTGGCTGGTGGCTGT...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTACAGCCACCAGCCAGTaGAACTTCCAGTCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: TYEARTPARQASTPRTAPTATSQ*NFQSVL
Trigger: GAGCACTGACTGGAAGTTTCACTGGCTGGTGGCTGT...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CACCGCCCCTGGATCCGGCCAAGCGGCCGCCTGGCGCTATTTGCCCTCTGTGACACAGCCACCAGCCAGTaGAACTTCCAGTCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: HRPWIRPSGRLALFALCDTATSQ*NFQSVL
Trigger: GAGCACTGACTGGAAGTTTCACTGGCTGGTGGCTGT...GTCACAGAGGGCAAATAGCGCCAGGCGGCCGCTTGGCCGGATCCAGGGGCGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAAGAAAGGCCGGCCTaGGGACGGACAGCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPEERPA*GRTAGF
Trigger: GAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTC...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGTGTCCCACTGTGTCCTaGGCAGCGGCCATCCCACAG +
Preference number: 4 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKCPTVS*AAAIPQ
Trigger: CTGTGGGATGGCCGCTGCTCAGGACACAGTGGGACA...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GGGAGACTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGGCCGGTCTCGACCACCACTaGGTTGGTTTGAGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: GRLSSPDSWAGLDPATLAGLDHH*VGLSPC
Trigger: GCAGGGACTCAAACCAACTCAGTGGTGGTCGAGACC...GGCCAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGGGGGCTGCTGGTGTCTaGAACCCGCAGTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGGAAGV*NPQSPQ
Trigger: CTGTGGAGACTGCGGGTTGCAGACACCAGCAGCCCC...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
CDS-3UTR GCA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGAACACTCTGATGGGTTaGGGTCATGGATGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LAARAGSSGPVHARPLPQNTLMG*GHGCCC
Trigger: GCAGCAGCATCCATGACCGCAACCCATCAGAGTGTT...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
CDS-3UTR GCA 90 bp GACGCAGCGGACGCTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAACACTCTGATGGGTTaGGGTCATGGATGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: DAADAAEDGSVVGRRSLPNTLMG*GHGCCC
Trigger: GCAGCAGCATCCATGACCGCAACCCATCAGAGTGTT...CGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
CDS-3UTR GCA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGGCTTCTTCCCAGCCCTaGAGTCATTGCAGAACCAGC +
Preference number: 4 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAEASSQP*SHCRTS
Trigger: GCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAGC...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGTGTATGGTGGGGGCTTaGGCTCGCTCTCCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAECMVGA*ARSPVF
Trigger: AAACACAGGAGAGCGAGCGCAAGCCCCCACCATACA...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AGCTGCCCGCCATCACCGCAGCGGAAGCACTCGTCCTCTGACTGCCTCTTCCCTCCCGCGGGACACACCTaGGGGTGGCACTCAAACATC +
Preference number: 4 (lower is better)
Translates to: SCPPSPQRKHSSSDCLFPPAGHT*GWHSNI
Trigger: GATGTTTGAGTGCCACCCGCAGGTGTGTCCCGCGGG...AGGGAAGAGGCAGTCAGAGGACGAGTGCTTCCGCTGCGGTGATGGCGGGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp CAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCCCACGCCTTGGTGCAGAACTTaGGGTCACACAGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: QCSGRRGTLQGHTPLNPTPWCRT*GHTAPA
Trigger: AGCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGG...CGTGGGGTTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGTCCCGAAGGGCCGCTTaGCAAGGCCCAGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: KHCEGDPASHGRVSPEERSRRAA*QGPGRT
Trigger: TGTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGA...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGCCCCCTTCTCAGGGTaGTCCAGACTTCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPAPFSG*SRLPRV
Trigger: GACCCTGGGAAGTCTGGAGCACCCTGAGAAGGGGGC...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATGCCCCCTTCTCAGGGTaGTCCAGACTTCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDAPFSG*SRLPRV
Trigger: GACCCTGGGAAGTCTGGAGCACCCTGAGAAGGGGGC...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCGATGCTGGTTTCGGATaGCAAGGAATCCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGDAGFG*QGILRD
Trigger: ATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATC...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCGACCACATTTTAAGCTaGCCATTCGGACACATCCCC +
Preference number: 4 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGDHILS*PFGHIP
Trigger: GGGGATGTGTCCGAATGGGCAGCTTAAAATGTGGTC...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGAAGACAGACAAACACTaGGAAGGGGACCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWKTDKH*EGDPAS
Trigger: GCTGGCTGGGTCCCCTTCGCAGTGTTTGTCTGTCTT...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGCTGGAAGATGGGCACTaGACACGCCGGGGTTTAGAT +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWLEDGH*TRRGLD
Trigger: ATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAG...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGCCTGGTCTGGCCGACTaGAGACAGCAGGCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKPGLAD*RQQAVH
Trigger: GTGCACAGCCTGCTGTCTGCAGTCGGCCAGACCAGG...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGAGGCTACTGGAGAGCTaGGCTTTGCTGAGGAACACA +
Preference number: 4 (lower is better)
Translates to: LAARAGSSGPVHARPLPQRLLES*ALLRNT
Trigger: TGTGTTCCTCAGCAAAGCCCAGCTCTCCAGTAGCCT...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCCCACGAAGGGCAGGGCGTCGTaGCCGTTAAACTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: QCSGRRGTLQGHTPLNPTKGRAS*PLNFCM
Trigger: CATGCAGAAGTTTAACGGCCACGACGCCCTGCCCTT...CGTGGGGTTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCCCACGGTGGCATGGAGACTGTaGTCTTCTTCCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: QCSGRRGTLQGHTPLNPTVAWRL*SSSSQE
Trigger: CTCCTGGGAGGAAGAAGACCACAGTCTCCATGCCAC...CGTGGGGTTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGAGGAGGCTGCCTCCATaGCCTTGTAAGAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: LAARAGSSGPVHARPLPQRRLPP*PCKSLF
Trigger: GAACAAGCTCTTACAAGGCCATGGAGGCAGCCTCCT...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGTTTTTCGTTGCTGCCTaGCTCTTGAGCGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LAARAGSSGPVHARPLPQFFVAA*LLSEEA
Trigger: AGCCTCCTCGCTCAAGAGCCAGGCAGCAACGAAAAA...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTCCAAGGCAGGCGAGGTaGAAAGCTCCGCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPPRQAR*KAPQQG
Trigger: ACCCTGCTGCGGAGCTTTCCACCTCGCCTGCCTTGG...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGGAAGGGTTGGAAGCATaGCAGCTCACACAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAEEGLEA*QLTQLW
Trigger: CCACAGCTGTGTGAGCTGCCATGCTTCCAACCCTTC...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTAGGGTGGAAGGCCGCTaGGCAGGACTCACAGCACAG +
Preference number: 4 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPRVEGR*AGLTAQ
Trigger: CTGTGCTGTGAGTCCTGCCCAGCGGCCTTCCACCCT...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp ACTTCCCGAAGGGCCGCTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGGTGAAGCACTGGTTCTaGCAGAACTCGCCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: TSRRAACQGPGRTGGRPWVKHWF*QNSPAG
Trigger: TCCCGCGGGCGAGTTCTGCCAGAACCAGTGCTTCAC...CCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGAAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp CACCGCCCCTGGATCCGGCCAAGCGGCCGCCTGGCGCTATTTGCCCTCTGTGACGGAATCCACTGCAATTaGAGGCTCCACACCGGCAGA +
Preference number: 4 (lower is better)
Translates to: HRPWIRPSGRLALFALCDGIHCN*RLHTGR
Trigger: TCTGCCGGTGTGGAGCCTCCAATTGCAGTGGATTCC...GTCACAGAGGGCAAATAGCGCCAGGCGGCCGCTTGGCCGGATCCAGGGGCGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCGTTTCTAGCGACCCTTaGGAAAAGCCTACGCTACAC +
Preference number: 4 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGVSSDP*EKPTLH
Trigger: GTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAAC...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTTCACTCCTTTCGCCATaGAGCTCAGGGCCGCATCAG +
Preference number: 4 (lower is better)
Translates to: AEDGSVVGRRSLPRRPVRSLLSP*SSGPHQ
Trigger: CTGATGCGGCCCTGAGCTCCATGGCGAAAGGAGTGA...ACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GAAAGCCCAAGGCAGGCGAGGTGGAAAGCTCCGCAGCAGGGTCCTTCACAGAGCTCACAGCTGGGGGCGTaGTCAGCCCCAGTGGCGAGA +
Preference number: 4 (lower is better)
Translates to: ESPRQARWKAPQQGPSQSSQLGA*SAPVAR
Trigger: TCTCGCCACTGGGGCTGACCACGCCCCCAGCTGTGA...GCTCTGTGAAGGACCCTGCTGCGGAGCTTTCCACCTCGCCTGCCTTGGGCTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGTCACAGCTGGGGGCGTaGTCAGCCCCAGTGGCGAGA +
Preference number: 4 (lower is better)
Translates to: KHCEGDPASHGRVSPEERSQLGA*SAPVAR
Trigger: TCTCGCCACTGGGGCTGACCACGCCCCCAGCTGTGA...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGACCCACGGTCACAGCTaGGGGCGTGGTCAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWTHGHS*GRGQPQ
Trigger: CTGGGGCTGACCACGCCCCCAGCTGTGACCGTGGGT...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTACCCACGGTCACAGCTaGGGGCGTGGTCAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GHVGKGTHGAPFSGCSRLTHGHS*GRGQPQ
Trigger: CTGGGGCTGACCACGCCCCCAGCTGTGACCGTGGGT...AAGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCGGACACATCCCCCTGTaGGCGCACACGGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPGHIPL*AHTGGY
Trigger: ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCC...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGGGACCCAGCCAGCCATaGACGGGTGTCGCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: KHCEGDPASHGRVSPEERGPSQP*TGVAGR
Trigger: TCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCC...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGGGGAGGAGCCTGGTCTaGCCGACTGCAGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWGRSLV*PTADSR
Trigger: CCTGCTGTCTGCAGTCGGCCAGACCAGGCTCCTCCC...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGCCACAGGGAGTGTGCTaGGGAGGAGCCTGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWPQGVC*GGAWSG
Trigger: GCCAGACCAGGCTCCTCCCCAGCACACTCCCTGTGG...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGCAGCAGACTCCACTGTaGCCTGAGCAGCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAEQQTPL*PEQLFN
Trigger: ATTGAAGAGCTGCTCAGGTCACAGTGGAGTCTGCTG...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GGGAGACTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGGCCGCTAAACCCAAGAGCTaGAGATGCTGCCGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: GRLSSPDSWAGLDPATLAAKPKS*RCCRGS
Trigger: GCTTCCACGGCAGCATCTTCAGCTCTTGGGTTTAGC...GGCCAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR TCA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGCACACGAAACATGAGTaGATCCCTGAGGCACACTCG +
Preference number: 4 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAEHTKHE*IPEAHS
Trigger: CGAGTGTGCCTCAGGGATTCACTCATGTTTCGTGTG...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTAGTGGGCAGTGCAGATaGTGCTGTTGGAGGCGATCA +
Preference number: 4 (lower is better)
Translates to: AEDGSVVGRRSLPRRPVRSGQCR*CCWRRS
Trigger: TGATCGCCTCCAACAGCATCATCTGCACTGCCCACT...ACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCCCACGCCACACACGTCACAATaGTGCCAAGGACATTCCCAC +
Preference number: 4 (lower is better)
Translates to: QCSGRRGTLQGHTPLNPTPHTSQ*CQGHSH
Trigger: GTGGGAATGTCCTTGGCATCATTGTGACGTGTGTGG...CGTGGGGTTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGGAAGATAGGCCCAGGTaGGAAGTAGGCCCAACCCGG +
Preference number: 4 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGEDRPR*EVGPTR
Trigger: CCGGGTTGGGCCTACTTCTCACCTGGGCCTATCTTC...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGAAAAGCACCTGCTGCTaGATGTTCTCTCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWKSTCC*MFSPSL
Trigger: GAGGGAGGGAGAGAACATTCAGCAGCAGGTGCTTTT...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCCCACGAAAAGCACCTGCTGCTaGATGTTCTCTCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: QCSGRRGTLQGHTPLNPTKSTCC*MFSPSL
Trigger: GAGGGAGGGAGAGAACATTCAGCAGCAGGTGCTTTT...CGTGGGGTTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCAGGGCCACACACCCCTaGACCCCACGCTTACAGGTC +
Preference number: 4 (lower is better)
Translates to: VSSALSYGDSEGSSPGLSRATHP*TPRLQV
Trigger: GACCTGTAAGCGTGGGGTTCAGGGGTGTGTGGCCCT...GGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR TCA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGAGGGCCACACACCCCTaGACCCCACGCTTACAGGTC +
Preference number: 4 (lower is better)
Translates to: KHCEGDPASHGRVSPEERRATHP*TPRLQV
Trigger: GACCTGTAAGCGTGGGGTTCAGGGGTGTGTGGCCCT...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGGGTATGGTGAGGCTGTaGCACCCCGTGGACACAGCA +
Preference number: 4 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGGMVRL*HPVDTA
Trigger: TGCTGTGTCCACGGGGTGTCACAGCCTCACCATACC...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATGGTATGGTGAGGCTGTaGCACCCCGTGGACACAGCA +
Preference number: 4 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDGMVRL*HPVDTA
Trigger: TGCTGTGTCCACGGGGTGTCACAGCCTCACCATACC...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCTCAACAGGGTATGGTaGGGCTGTGACACCCCGTGG +
Preference number: 4 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDLNRVW*GCDTPW
Trigger: CCACGGGGTGTCACAGCCTCACCATACCCTGTTGAG...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp AACAGGGCCACCCCTTCCGTGCAAAGCCCTGCTGCAGCTCTGGACAGCCCCCAACCTCCACGCACCAGGTaGCGTGACTCACTCGGAGAA +
Preference number: 4 (lower is better)
Translates to: NRATPSVQSPAAALDSPQPPRTR*RDSLGE
Trigger: TTCTCCGAGTGAGTCACGTCACCTGGTGCGTGGAGG...TTGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCCTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp CGGAAGAAAGGCCGGCCTGAGGACGGACAGCTGGGTTCTCACTTCAGGTGCCTGGGCAGGAGGACAGCTTaGGCCCGAGAGGACAGCTTG +
Preference number: 4 (lower is better)
Translates to: RKKGRPEDGQLGSHFRCLGRRTA*AREDSL
Trigger: CAAGCTGTCCTCTCGGGCTCAAGCTGTCCTCCTGCC...CAGGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677559.1
CDS-3UTR GCA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCGCCGAGGATTTCTGGTaGCTGCTTCATCTTTATGCA +
Preference number: 4 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGAEDFW*LLHLYA
Trigger: TGCATAAAGATGAAGCAGGCACCAGAAATCCTCGGC...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTTCTTCCCGTTGGCACTaGCGAGGATTTCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: AEDGSVVGRRSLPRRPVRSSRWH*RGFLVP
Trigger: AGGCACCAGAAATCCTCGGCAGTGCCAACGGGAAGA...ACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTTGCATGACCCCCTCCTaGAGGCTACTGGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPCMTPS*RLLESW
Trigger: CCAGCTCTCCAGTAGCCTGCAGGAGGGGGTCATGCA...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GACGCAGCGGACGCTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGCAGTTTGGCATCGTGTaGGCCGGGTTCTCCATTAAA +
Preference number: 4 (lower is better)
Translates to: DAADAAEDGSVVGRRSLPQFGIV*AGFSIK
Trigger: TTTAATGGAGAACCCGGCGCACACGATGCCAAACTG...CGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CACCGCCCCTGGATCCGGCCAAGCGGCCGCCTGGCGCTATTTGCCCTCTGTGACGCTTCGACAAGGCCCTaGTCCAGCAAGGAGTCATAT +
Preference number: 4 (lower is better)
Translates to: HRPWIRPSGRLALFALCDASTRP*SSKESY
Trigger: ATATGACTCCTTGCTGGAGCAGGGCCTTGTCGAAGC...GTCACAGAGGGCAAATAGCGCCAGGCGGCCGCTTGGCCGGATCCAGGGGCGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp CAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCCCACGGCTTCGACAAGGCCCTaGTCCAGCAAGGAGTCATAT +
Preference number: 4 (lower is better)
Translates to: QCSGRRGTLQGHTPLNPTASTRP*SSKESY
Trigger: ATATGACTCCTTGCTGGAGCAGGGCCTTGTCGAAGC...CGTGGGGTTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGCTTAGACACAAGAGCTaGTTCGACAAGGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWLRHKS*FDKALL
Trigger: GAGCAGGGCCTTGTCGAAGCAGCTCTTGTGTCTAAG...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGATCTGCAGAAACCATaGAAGGCCACCAAGGGTAAC +
Preference number: 4 (lower is better)
Translates to: LAARAGSSGPVHARPLPQDLQKP*KATKGN
Trigger: GTTACCCTTGGTGGCCTTGCATGGTTTCTGCAGATC...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGAAGACTCTGCAGCAATaGCAGCCTCCTTGGCTACTT +
Preference number: 4 (lower is better)
Translates to: LAARAGSSGPVHARPLPQKTLQQ*QPPWLL
Trigger: AAGTAGCCAAGGAGGCTGGCATTGCTGCAGAGTCTT...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GACGCAGCGGACGCTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAAGACTCTGCAGCAATaGCAGCCTCCTTGGCTACTT +
Preference number: 4 (lower is better)
Translates to: DAADAAEDGSVVGRRSLPKTLQQ*QPPWLL
Trigger: AAGTAGCCAAGGAGGCTGGCATTGCTGCAGAGTCTT...CGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGTCTGGGGTCAGCCTCTaGCGTCTTTTGAGGAGTACT +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWSGVSL*RLLRST
Trigger: AGTACTCCTCAAAAGACGGCAGAGGCTGACCCCAGA...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACACAGAGCAGGAGGCTaGCCGGCTTCTCACACAGCT +
Preference number: 4 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEHRAGG*PASHTA
Trigger: AGCTGTGTGAGAAGCCGGGCAGCCTCCTGCTCTGTG...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTGCTTCTTCCCAGCCCTaGAGTCATTGCAGAACCAGC +
Preference number: 4 (lower is better)
Translates to: AEDGSVVGRRSLPRRPVRASSQP*SHCRTS
Trigger: GCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAGC...ACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTGGGATGGCAAACTTCTaGCGGCCACCATCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: TYEARTPARQASTPRTAPGMANF*RPPSVV
Trigger: AACTACAGATGGTGGCCGGCAGAAGTTTGCCATCCC...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCCCACGGGGATGGCAAACTTCTaGCGGCCACCATCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: QCSGRRGTLQGHTPLNPTGMANF*RPPSVV
Trigger: AACTACAGATGGTGGCCGGCAGAAGTTTGCCATCCC...CGTGGGGTTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGTGCAGAACTTGCGGTCCCCGCGGGACACACCTaGGGGTGGCACTCAAACATC +
Preference number: 4 (lower is better)
Translates to: LAKAQAGQVVGLGAELAVPAGHT*GWHSNI
Trigger: GATGTTTGAGTGCCACCCGCAGGTGTGTCCCGCGGG...GACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGATGTCGTTCTCGTGTaGGTGCTTGATTCTCGCCAT +
Preference number: 4 (lower is better)
Translates to: LAARAGSSGPVHARPLPQDVVLV*VLDSRH
Trigger: ATGGCGAGAATCAAGCACGCACACGAGAACGACATC...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGTCACACAGCACCAGCTaGCCGCCATCACCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWSHSTS*PPSPQR
Trigger: CCGCTGCGGTGATGGCGGGCAGCTGGTGCTGTGTGA...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTCACACAGCACCAGCTaGCCGCCATCACCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTSHSTS*PPSPQR
Trigger: CCGCTGCGGTGATGGCGGGCAGCTGGTGCTGTGTGA...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTGCTGTCCCGTCCTGGTaGTCCTTACAGAACGAATTG +
Preference number: 4 (lower is better)
Translates to: TYEARTPARQASTPRTAPAVPSW*SLQNEL
Trigger: CAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGC...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATTCAGACGGTCATCAGTaGAGACGCAGCGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDSDGHQ*RRSGRC
Trigger: GCAGCGTCCGCTGCGTCTGCACTGATGACCGTCTGA...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGAGTTGTCACTTCCTGTaGTCTAAGCAGACTGCGGTC +
Preference number: 4 (lower is better)
Translates to: LAARAGSSGPVHARPLPQSCHFL*SKQTAV
Trigger: GACCGCAGTCTGCTTAGAGCACAGGAAGTGACAACT...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGATGCTGGTTTCGGATaGCAAGGAATCCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: LAARAGSSGPVHARPLPQDAGFG*QGILRD
Trigger: ATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATC...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACAAGACAGACAAACACTaGGAAGGGGACCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYKTDKH*EGDPAS
Trigger: GCTGGCTGGGTCCCCTTCGCAGTGTTTGTCTGTCTT...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACCTGGAAGATGGGCACTaGACACGCCGGGGTTTAGAT +
Preference number: 4 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYLEDGH*TRRGLD
Trigger: ATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAG...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACAAGGGCAGGGCGTCGTaGCCGTTAAACTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYKGRAS*PLNFCM
Trigger: CATGCAGAAGTTTAACGGCCACGACGCCCTGCCCTT...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGTTTCAGCTTGTCGGCTaGAATAAAGGGCAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWFQLVG*NKGQGV
Trigger: GACGCCCTGCCCTTTATTCCAGCCGACAAGCTGAAA...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GGGAGACTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGGCCGTGGCATGGAGACTGTaGTCTTCTTCCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GRLSSPDSWAGLDPATLAVAWRL*SSSSQE
Trigger: CTCCTGGGAGGAAGAAGACCACAGTCTCCATGCCAC...GGCCAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTTCCTGCTTCGTGGCATaGAGACTGTGGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: TYEARTPARQASTPRTAPSCFVA*RLWSSS
Trigger: GGAAGAAGACCACAGTCTCCATGCCACGAAGCAGGA...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGTCCCTTCCTGCTTCGTaGCATGGAGACTGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAESLPAS*HGDCGL
Trigger: AAGACCACAGTCTCCATGCCACGAAGCAGGAAGGGA...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGCCACCAGGGCAAACTTaGTGTTGTAGCGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAEPPGQT*CCSVLS
Trigger: AGAGAGCACGCTACAACACCAAGTTTGCCCTGGTGG...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCCCACGCCACCAGGGCAAACTTaGTGTTGTAGCGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: QCSGRRGTLQGHTPLNPTPPGQT*CCSVLS
Trigger: AGAGAGCACGCTACAACACCAAGTTTGCCCTGGTGG...CGTGGGGTTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCCCACGAGGAGGCTGCCTCCATaGCCTTGTAAGAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: QCSGRRGTLQGHTPLNPTRRLPP*PCKSLF
Trigger: GAACAAGCTCTTACAAGGCCATGGAGGCAGCCTCCT...CGTGGGGTTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGGTGAACCTCCCTTCTaGCCTCCGGGAAAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPGEPPF*PPGKPK
Trigger: CTTGGGCTTTCCCGGAGGCCAGAAGGGAGGTTCACC...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGTTGGGTTTGAAGGGTTaGAAGCATGGCAGCTCACAC +
Preference number: 4 (lower is better)
Translates to: LAARAGSSGPVHARPLPQLGLKG*KHGSSH
Trigger: GTGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAA...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCACGTTGACGTGGGCGTaGTGTCGCTTCCCCTTCCGA +
Preference number: 4 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPTLTWA*CRFPFR
Trigger: TCGGAAGGGGAAGCGACACCACGCCCACGTCAACGT...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGTTCAGGCAGTCAGGGTaGAAGGCCGCTGGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: KHCEGDPASHGRVSPEERFRQSG*KAAGQD
Trigger: GTCCTGCCCAGCGGCCTTCCACCCTGACTGCCTGAA...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTTGATGTGCTTGTATaGTGGGGGCTTGCGCTCGCT +
Preference number: 4 (lower is better)
Translates to: AEDGSVVGRRSLPRRPVRLDVLV*WGLALA
Trigger: AGCGAGCGCAAGCCCCCACCATACAAGCACATCAAG...ACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGGTGAAGCACTGGTTCTaGCAGAACTCGCCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGVKHWF*QNSPAG
Trigger: TCCCGCGGGCGAGTTCTGCCAGAACCAGTGCTTCAC...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTGGAATCCACTGCAATTaGAGGCTCCACACCGGCAGA +
Preference number: 4 (lower is better)
Translates to: AEDGSVVGRRSLPRRPVRGIHCN*RLHTGR
Trigger: TCTGCCGGTGTGGAGCCTCCAATTGCAGTGGATTCC...ACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGGTCGTCGAGGTCTTTaGTCTATCCCCGAGGAATCC +
Preference number: 4 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYGRRGL*SIPEES
Trigger: GGATTCCTCGGGGATAGACCAAAGACCTCGACGACC...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCTGTACGTCTGTGTCCTaGCGGCTCGAGCTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPCTSVS*RLELGP
Trigger: AGGACCCAGCTCGAGCCGCCAGGACACAGACGTACA...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAATGTACGTCTGTGTCCTaGCGGCTCGAGCTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: FQSVLREAWDPAGPHTPECTSVS*RLELGP
Trigger: AGGACCCAGCTCGAGCCGCCAGGACACAGACGTACA...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTAGATGGAAGCCACTCTaGGTGGCAGGAGAGCTAGAC +
Preference number: 4 (lower is better)
Translates to: AEDGSVVGRRSLPRRPVRRWKPL*VAGELD
Trigger: GTCTAGCTCTCCTGCCACCCAGAGTGGCTTCCATCT...ACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGAGACCGGGCAAAGGCACACATaGTGCCCCCTTCTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SALSYGDSEGSSPGLSETGQRHT*CPLLRV
Trigger: CACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCC...GGTCTCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGGGCAAAGGCACACATaGTGCCCCCTTCTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPGQRHT*CPLLRV
Trigger: CACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCC...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGCCCCTCAGGACACGTaGGCAAAGGCACACATGGTG +
Preference number: 4 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPAPQDT*AKAHMV
Trigger: CACCATGTGTGCCTTTGCCCACGTGTCCTGAGGGGC...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCGCCCCTCAGGACACGTaGGCAAAGGCACACATGGTG +
Preference number: 4 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPAPQDT*AKAHMV
Trigger: CACCATGTGTGCCTTTGCCCACGTGTCCTGAGGGGC...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGAGACCGTGGTCAGCCCCAGTaGCGAGAAACCCTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: VCTFVWGLRGLVSRAVRDRGQPQ*RETLQA
Trigger: AGCTTGCAGGGTTTCTCGCCACTGGGGCTGACCACG...GTCTCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGGGACACATCCCCCTGTaGGCGCACACGGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: KHCEGDPASHGRVSPEERGHIPL*AHTGGY
Trigger: ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCC...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTGGACCCAGCCAGCCATaGACGGGTGTCGCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: GHVGKGTHGAPFSGCSRLGPSQP*TGVAGR
Trigger: TCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCC...AAGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GGACAGGTGGTAGGCCTTGGTGCAGAACTTGCGGTCACACAGCACCAGCTGCCCGGTAGTCCTGGAAGATaGGCACTGCACACGCCGGGG +
Preference number: 4 (lower is better)
Translates to: GQVVGLGAELAVTQHQLPGSPGR*ALHTPG
Trigger: CCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACC...GGGCAGCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGGCTGTGACACCCCGTaGACACAGCATTTTACTCTA +
Preference number: 4 (lower is better)
Translates to: LAARAGSSGPVHARPLPQGCDTP*TQHFTL
Trigger: TAGAGTAAAATGCTGTGTCCACGGGGTGTCACAGCC...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AACAGGGCCACCCCTTCCGTGCAAAGCCCTGCTGCAGCTCTGGACAGCCCCCAATGGACACACACACCATaGGCAAGCAAGGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: NRATPSVQSPAAALDSPQWTHTP*ASKARA
Trigger: GGCCCTGGCCTTGCTTGCCCATGGTGTGTGTGTCCA...TTGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCCTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATTTCCCTATGTCGGGGTaGCTCTCCAGGGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDFPMSG*LSRVSA
Trigger: TGCAGAGACCCTGGAGAGTCACCCCGACATAGGGAA...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp AACAGGGCCACCCCTTCCGTGCAAAGCCCTGCTGCAGCTCTGGACAGCCCCCAATTCCCTATGTCGGGGTaGCTCTCCAGGGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: NRATPSVQSPAAALDSPQFPMSG*LSRVSA
Trigger: TGCAGAGACCCTGGAGAGTCACCCCGACATAGGGAA...TTGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGACTCCACTGTGACCTaGGCAGCTCTTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYDSTVT*AALQSP
Trigger: AGGAGATTGAAGAGCTGCTCAGGTCACAGTGGAGTC...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTCACACGAAACATGAGTaGATCCCTGAGGCACACTCG +
Preference number: 4 (lower is better)
Translates to: AEDGSVVGRRSLPRRPVRHTKHE*IPEAHS
Trigger: CGAGTGTGCCTCAGGGATTCACTCATGTTTCGTGTG...ACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp TCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGAGGTTGGAGGCGATCACTaGGCATCCTGCTGCCAGACA +
Preference number: 4 (lower is better)
Translates to: SSALSYGDSEGSSPGLSEVGGDH*ASCCQT
Trigger: TGTCTGGCAGCAGGATGCTCAGTGATCGCCTCCAAC...CTCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR TCA 90 bp AGCTGCCCGCCATCACCGCAGCGGAAGCACTCGTCCTCTGACTGCCTCTTCCCTGTTGGAGGCGATCACTaGGCATCCTGCTGCCAGACA +
Preference number: 4 (lower is better)
Translates to: SCPPSPQRKHSSSDCLFPVGGDH*ASCCQT
Trigger: TGTCTGGCAGCAGGATGCTCAGTGATCGCCTCCAAC...AGGGAAGAGGCAGTCAGAGGACGAGTGCTTCCGCTGCGGTGATGGCGGGCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGAGCACCAGCTCACGTTaGCGTGGGCGTGGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWSTSSR*RGRGVA
Trigger: AGCGACACCACGCCCACGTCAACGTGAGCTGGTGCT...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp AGCTGCCCGCCATCACCGCAGCGGAAGCACTCGTCCTCTGACTGCCTCTTCCCTGGTACTGGCGCTTGGTaGAGCACTGGTTCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: SCPPSPQRKHSSSDCLFPGTGAW*STGSGR
Trigger: TCTGCCAGAACCAGTGCTTCACCAAGCGCCAGTACC...AGGGAAGAGGCAGTCAGAGGACGAGTGCTTCCGCTGCGGTGATGGCGGGCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAAGGTACTGGCGCTTGGTaGAGCACTGGTTCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEGTGAW*STGSGR
Trigger: TCTGCCAGAACCAGTGCTTCACCAAGCGCCAGTACC...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGGCTATTTGCCCTCTGTaGCTCTCCGCCAGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWAICPL*LSASPS
Trigger: GGAGGGGCTGGCGGAGAGTCACAGAGGGCAAATAGC...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAATTTGTCCAGGAACGCTaGGCTGGGCTCAGACGGTCA +
Preference number: 4 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEFVQER*AGLRRS
Trigger: TGACCGTCTGAGCCCAGCTCAGCGTTCCTGGACAAA...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGAGGGCCACACACCCCTaGACCCCACGCTTACAGGTC +
Preference number: 4 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLRATHP*TPRLQV
Trigger: GACCTGTAAGCGTGGGGTTCAGGGGTGTGTGGCCCT...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GACGCAGCGGACGCTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGGGAGAAGTTAGAGTCTaGACTGGAAAGCACTACTCC +
Preference number: 4 (lower is better)
Translates to: DAADAAEDGSVVGRRSLPGEVRV*TGKHYS
Trigger: GGAGTAGTGCTTTCCAGTTCAGACTCTAACTTCTCC...CGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp AACAGGGCCACCCCTTCCGTGCAAAGCCCTGCTGCAGCTCTGGACAGCCCCCAACCCACTCCTGGCATCTaGAGTGGGACAATGCTGCCA +
Preference number: 4 (lower is better)
Translates to: NRATPSVQSPAAALDSPQPTPGI*SGTMLP
Trigger: TGGCAGCATTGTCCCACTTCAGATGCCAGGAGTGGG...TTGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp AACAGGGCCACCCCTTCCGTGCAAAGCCCTGCTGCAGCTCTGGACAGCCCCCAAACGCACCAGGTGACGTaGCTCACTCGGAGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: NRATPSVQSPAAALDSPQTHQVT*LTRRSH
Trigger: ATGGCTTCTCCGAGTGAGTCACGTCACCTGGTGCGT...TTGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GTCTGGAAGCAACAGGAATCAGGTGTGGTGTGTGAGTCGCCTTCCACCCCACCCAGCCGCAGAGCTCTATaGGCCCCGCCCAGGTTGCCT +
Preference number: 4 (lower is better)
Translates to: VWKQQESGVVCESPSTPPSRRAL*APPRLP
Trigger: AGGCAACCTGGGCGGGGCTCATAGAGCTCTGCGGCT...GGGTGGGGTGGAAGGCGACTCACACACCACACCTGATTCCTGTTGCTTCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp GTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGCAGCAATAGGGGGCTaGTGGTGTCTGCAACCCGCA +
Preference number: 4 (lower is better)
Translates to: VSSALSYGDSEGSSPGLSAAIGG*WCLQPA
Trigger: TGCGGGTTGCAGACACCAGCAGCCCCCTATTGCTGC...GGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGCTTCGACAAGGCCCTaGTCCAGCAAGGAGTCATAT +
Preference number: 4 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYASTRP*SSKESY
Trigger: ATATGACTCCTTGCTGGAGCAGGGCCTTGTCGAAGC...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GTAGGACCGCCCGTCCGGGGTGCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTCTTAGACACAAGAGCTaGTTCGACAAGGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: VGPPVRGAAEGCPVLVLLLRHKS*FDKALL
Trigger: GAGCAGGGCCTTGTCGAAGCAGCTCTTGTGTCTAAG...AAGGAGCACCAGGACGGGACAGCCTTCAGCTGCACCCCGGACGGGCGGTCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGGATCTGCAGAAACCATaGAAGGCCACCAAGGGTAAC +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWDLQKP*KATKGN
Trigger: GTTACCCTTGGTGGCCTTGCATGGTTTCTGCAGATC...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGGCCTCATGCCTGCATCTCCCTTCCTaGTTCGTGGCATGGAGACTG +
Preference number: 4 (lower is better)
Translates to: LSSPDSWAGLDPATLASCLHLPS*FVAWRL
Trigger: CAGTCTCCATGCCACGAAGCAGGAAGGGAGATGCAG...GCATGAGGCCAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGCTTGGTGTTGTAGCGTaGTCTCTGCTTCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAELGVVA*SLLLTQ
Trigger: CTGAGTGAGAAGCAGAGAGCACGCTACAACACCAAG...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGCTCTTCCGAAGACTGTaGTTGTCCGTCCTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWLFRRL*LSVLSL
Trigger: AAGACTCAGGACGGACAAGCACAGTCTTCGGAAGAG...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CCAGGGAGACTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGCTTGAGCGAGGAGGCTaGCTCCATGGCCTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: PGRLSSPDSWAGLDPATLLERGG*LHGLVR
Trigger: TCTTACAAGGCCATGGAGGCAGCCTCCTCGCTCAAG...CAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp ACTTCCCGAAGGGCCGCTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGGCTTCTTCCCAGCCCTaGAGTCATTGCAGAACCAGC +
Preference number: 4 (lower is better)
Translates to: TSRRAACQGPGRTGGRPWASSQP*SHCRTS
Trigger: GCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAGC...CCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCCCCGAGGAATCCACTaGAATTGGAGGCTCCACACC +
Preference number: 4 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDPRGIH*NWRLHT
Trigger: GGTGTGGAGCCTCCAATTGCAGTGGATTCCTCGGGG...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGGCAGAGTCCCGAAGGGCCGCTTaGCAAGGCCCAGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: AAEGCPVLVLLTERIGAESRRAA*QGPGRT
Trigger: TGTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGA...CTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTTCAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCACTCCGGGCCAGTTCATaGTCGCCCTCTCCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: CGDTARPVPRTTFQVRASLRASS*SPSPAG
Trigger: GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAG...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGATCAGACGGTCATCAGTaGAGACGCAGCGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: FVCTFVWGLRGLVSRAVRSDGHQ*RRSGRC
Trigger: GCAGCGTCCGCTGCGTCTGCACTGATGACCGTCTGA...TCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGTGCGGTCTCACGCCCTaGAAAGTCACTCCTTTCGCC +
Preference number: 4 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGCGLTP*KVTPFA
Trigger: GGCGAAAGGAGTGACTTTGCAGGGCGTGAGACCGCA...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTTGCGGTCTCACGCCCTaGAAAGTCACTCCTTTCGCC +
Preference number: 4 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPCGLTP*KVTPFA
Trigger: GGCGAAAGGAGTGACTTTGCAGGGCGTGAGACCGCA...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAATGCGGTCTCACGCCCTaGAAAGTCACTCCTTTCGCC +
Preference number: 4 (lower is better)
Translates to: FQSVLREAWDPAGPHTPECGLTP*KVTPFA
Trigger: GGCGAAAGGAGTGACTTTGCAGGGCGTGAGACCGCA...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CACCGCCCCTGGATCCGGCCAAGCGGCCGCCTGGCGCTATTTGCCCTCTGTGACAGTTGTCACTTCCTGTaGTCTAAGCAGACTGCGGTC +
Preference number: 4 (lower is better)
Translates to: HRPWIRPSGRLALFALCDSCHFL*SKQTAV
Trigger: GACCGCAGTCTGCTTAGAGCACAGGAAGTGACAACT...GTCACAGAGGGCAAATAGCGCCAGGCGGCCGCTTGGCCGGATCCAGGGGCGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTAGTTGTCACTTCCTGTaGTCTAAGCAGACTGCGGTC +
Preference number: 4 (lower is better)
Translates to: TYEARTPARQASTPRTAPSCHFL*SKQTAV
Trigger: GACCGCAGTCTGCTTAGAGCACAGGAAGTGACAACT...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGCGAGGCACGCACACCTaGCAGGCAGGCCTCCACCCC +
Preference number: 4 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGRGTHT*QAGLHP
Trigger: GGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCG...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAAGAAACTTCCAGTCAGTaGTCAGGGAGGCGTGGGACC +
Preference number: 4 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEETSSQ*SGRRGT
Trigger: GGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTAGTCTTAACCGGCGAGTaGCCCTCAGAGGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVVLTGE*PSEATA
Trigger: GGCCGTGGCCTCTGAGGGGCACTCGCCGGTTAAGAC...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CACCGCCCCTGGATCCGGCCAAGCGGCCGCCTGGCGCTATTTGCCCTCTGTGACCTCCCCAAAGTGCACTaGAAAGCCGATTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: HRPWIRPSGRLALFALCDLPKVH*KADSAV
Trigger: AACAGCAGAATCGGCTTTGCAGTGCACTTTGGGGAG...GTCACAGAGGGCAAATAGCGCCAGGCGGCCGCTTGGCCGGATCCAGGGGCGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTCTCCCCAAAGTGCACTaGAAAGCCGATTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: TYEARTPARQASTPRTAPLPKVH*KADSAV
Trigger: AACAGCAGAATCGGCTTTGCAGTGCACTTTGGGGAG...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGCTCCCCAAAGTGCACTaGAAAGCCGATTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAELPKVH*KADSAV
Trigger: AACAGCAGAATCGGCTTTGCAGTGCACTTTGGGGAG...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGGATGCTGGTTTCGGATaGCAAGGAATCCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWDAGFG*QGILRD
Trigger: ATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATC...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTGGGTTTAGGTGCAGATaGTGGTTTCGGATGCCAAGG +
Preference number: 4 (lower is better)
Translates to: AEDGSVVGRRSLPRRPVRGFRCR*WFRMPR
Trigger: CCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC...ACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGGGGTATGGGTTTAGGTaGAGATGCTGGTTTCGGATG +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWGYGFR*RCWFRM
Trigger: CATCCGAAACCAGCATCTGCACCTAAACCCATACCC...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCCCACGGACCACATTTTAAGCTaGCCATTCGGACACATCCCC +
Preference number: 4 (lower is better)
Translates to: QCSGRRGTLQGHTPLNPTDHILS*PFGHIP
Trigger: GGGGATGTGTCCGAATGGGCAGCTTAAAATGTGGTC...CGTGGGGTTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTGGTTCTCACTTCAGGTaGCTGAAGAGTTTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: AEDGSVVGRRSLPRRPVRGSHFR*LKSFPH
Trigger: GTGGGGGAAACTCTTCAGGCACCTGAAGTGAGAACC...ACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CTCCGCTCCTCTAGGATGAGCCCACTCCTGGCATCTGAAGTGGGACAATGCTGCGGGCCACCCCTTCCGTaGAAAGCCCTGCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LRSSRMSPLLASEVGQCCGPPLP*KALLQL
Trigger: GAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCC...GCAGCATTGTCCCACTTCAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCAGGGCCACCCCTTCCGTaGAAAGCCCTGCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPGPPLP*KALLQL
Trigger: GAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCC...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGCTTTACAGCCCTCCATaGACGTCTCAGGCCCAGACG +
Preference number: 4 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKLYSPP*TSQAQT
Trigger: CGTCTGGGCCTGAGACGTGCATGGAGGGCTGTAAAG...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGATCCCACAGGGAGTGTaGTGGGGAGGAGCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWIPQGV*WGGAWS
Trigger: AGACCAGGCTCCTCCCCAGCACACTCCCTGTGGGAT...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGCTTAGAACACTGCGGTaGGTCGCATCCTCGGCGGGC +
Preference number: 4 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWLRTLR*VASSAG
Trigger: GCCCGCCGAGGATGCGACGCACCGCAGTGTTCTAAG...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508803.6
CDS-3UTR CCA 90 bp GACGCAGCGGACGCTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGGGTAACCCGACACTTTaGACCACACCAAATCACCAA +
Preference number: 4 (lower is better)
Translates to: DAADAAEDGSVVGRRSLPGNPTL*TTPNHQ
Trigger: TTGGTGATTTGGTGTGGTCCAAAGTGTCGGGTTACC...CGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTACCCTACTCCTCTTCTaGGGTCAGCCTCTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPTLLLF*GQPLPS
Trigger: AGACGGCAGAGGCTGACCCCAGAAGAGGAGTAGGGT...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACTCCCTTCCTGCTTCGTaGCATGGAGACTGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYSLPAS*HGDCGL
Trigger: AAGACCACAGTCTCCATGCCACGAAGCAGGAAGGGA...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GGGAGACTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGGCCTCCCTTCCTGCTTCGTaGCATGGAGACTGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: GRLSSPDSWAGLDPATLASLPAS*HGDCGL
Trigger: AAGACCACAGTCTCCATGCCACGAAGCAGGAAGGGA...GGCCAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGTTCAGGCAGTCAGGGTaGAAGGCCGCTGGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWFRQSG*KAAGQD
Trigger: GTCCTGCCCAGCGGCCTTCCACCCTGACTGCCTGAA...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTTCAGGCAGTCAGGGTaGAAGGCCGCTGGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTFRQSG*KAAGQD
Trigger: GTCCTGCCCAGCGGCCTTCCACCCTGACTGCCTGAA...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTGGAACATTTTTGGGATaGCAAACTTCTGCCGGCCAC +
Preference number: 4 (lower is better)
Translates to: TYEARTPARQASTPRTAPGTFLG*QTSAGH
Trigger: GTGGCCGGCAGAAGTTTGCCATCCCAAAAATGTTCC...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGATGTGCTTGTATGGTaGGGGCTTGCGCTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPDVLVW*GLALAL
Trigger: GAGAGCGAGCGCAAGCCCCCACCATACAAGCACATC...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCGCTTGGTGAAGCACTaGTTCTGGCAGAACTCGCCC +
Preference number: 4 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPRLVKH*FWQNSP
Trigger: GGGCGAGTTCTGCCAGAACCAGTGCTTCACCAAGCG...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACGCTTGGTGAAGCACTaGTTCTGGCAGAACTCGCCC +
Preference number: 4 (lower is better)
Translates to: FQSVLREAWDPAGPHTPERLVKH*FWQNSP
Trigger: GGGCGAGTTCTGCCAGAACCAGTGCTTCACCAAGCG...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAACCTGGCGGCTCGAGCTaGGTCCTCCGGGCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: LRARKGATRRRVSSDPWEPGGSS*VLRASS
Trigger: TGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAGG...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGACCTGGCGGCTCGAGCTaGGTCCTCCGGGCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRPGGSS*VLRASS
Trigger: TGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAGG...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTAAGGATGGCTCAGTGGTaGGGAGGCGCTCCCTCCCGA +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVRMAQW*GGAPSR
Trigger: TCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCT...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp ACTTCCCGAAGGGCCGCTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGAGATGGAAGCCACTCTaGGTGGCAGGAGAGCTAGAC +
Preference number: 4 (lower is better)
Translates to: TSRRAACQGPGRTGGRPWRWKPL*VAGELD
Trigger: GTCTAGCTCTCCTGCCACCCAGAGTGGCTTCCATCT...CCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACAGTGGGTGTCATACCTaGCCTAGACCAGTGCCCATA +
Preference number: 4 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYSGCHT*PRPVPI
Trigger: TATGGGCACTGGTCTAGGCCAGGTATGACACCCACT...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATACCCACGGTCACAGCTaGGGGCGTGGTCAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYTHGHS*GRGQPQ
Trigger: CTGGGGCTGACCACGCCCCCAGCTGTGACCGTGGGT...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGAGACCTGAGGACGGACAGCTaGGTTCTCACTTCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: VCTFVWGLRGLVSRAVRDLRTDS*VLTSGA
Trigger: GGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAG...GTCTCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTAGGACCCAGCCAGCCATaGACGGGTGTCGCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVGPSQP*TGVAGR
Trigger: TCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCC...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGGGTAGTCCTGGAAGATaGGCACTGCACACGCCGGGG +
Preference number: 4 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLGSPGR*ALHTPG
Trigger: CCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACC...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AACAGGGCCACCCCTTCCGTGCAAAGCCCTGCTGCAGCTCTGGACAGCCCCCAAAGCGAGGGGAATCCGTaGCTTTACAGCCCTCCATGC +
Preference number: 4 (lower is better)
Translates to: NRATPSVQSPAAALDSPQSEGNP*LYSPPC
Trigger: GCATGGAGGGCTGTAAAGCCACGGATTCCCCTCGCT...TTGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp CCAGGGAGACTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGGCCTCTGCCGTCTTTTaGGGAGTACTCTTCCCTATG +
Preference number: 4 (lower is better)
Translates to: PGRLSSPDSWAGLDPATLASAVF*GVLFPM
Trigger: CATAGGGAAGAGTACTCCTCAAAAGACGGCAGAGGC...CAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR TCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCATTGCTGCCTGGCTCTTaGGCGAGGAGGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPLLPGS*ARRLPP
Trigger: TGGAGGCAGCCTCCTCGCTCAAGAGCCAGGCAGCAA...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGAGGCTAAACCCAAGAGCTaGAGATGCTGCCGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: SSALSYGDSEGSSPGLSEAKPKS*RCCRGS
Trigger: GCTTCCACGGCAGCATCTTCAGCTCTTGGGTTTAGC...CTCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR TCA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATGCTAAACCCAAGAGCTaGAGATGCTGCCGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDAKPKS*RCCRGS
Trigger: GCTTCCACGGCAGCATCTTCAGCTCTTGGGTTTAGC...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCAGTGGGCAGTGCAGATaGTGCTGTTGGAGGCGATCA +
Preference number: 4 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPSGQCR*CCWRRS
Trigger: TGATCGCCTCCAACAGCATCATCTGCACTGCCCACT...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGAAGGCTTATTCACCTTaGTGTGCTTGTATGGTGGGG +
Preference number: 4 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAEKAYSP*CACMVG
Trigger: CCCCACCATACAAGCACATCAAGGTGAATAAGCCTT...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCGCACTTAGGGATTTCTaGAATATCCGCTGTGTAGAT +
Preference number: 4 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGALRDF*NIRCVD
Trigger: ATCTACACAGCGGATATTTCAGAAATCCCTAAGTGC...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATTCTCGTGTGCGTGCTTaGTTCTCGCCATGCACTCCT +
Preference number: 4 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDSRVRA*FSPCTP
Trigger: AGGAGTGCATGGCGAGAATCAAGCACGCACACGAGA...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAATCTCGTGTGCGTGCTTaGTTCTCGCCATGCACTCCT +
Preference number: 4 (lower is better)
Translates to: FQSVLREAWDPAGPHTPESRVRA*FSPCTP
Trigger: AGGAGTGCATGGCGAGAATCAAGCACGCACACGAGA...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTGCAGAGGTGGCAAAATaGAGTCGAAGGTTTGCCACA +
Preference number: 4 (lower is better)
Translates to: AEDGSVVGRRSLPRRPVRAEVAK*SRRFAT
Trigger: TGTGGCAAACCTTCGACTTCATTTTGCCACCTCTGC...ACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACGTCCGGGGTGCAGCTaGAGGCTGTCCCGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLRPGCS*RLSRPG
Trigger: ACCAGGACGGGACAGCCTTCAGCTGCACCCCGGACG...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CGGAAGAAAGGCCGGCCTGAGGACGGACAGCTGGGTTCTCACTTCAGGTGCCTGCAGTCTTGGTGCTTCTaGCCGATGCCGCCCCTAAGT +
Preference number: 4 (lower is better)
Translates to: RKKGRPEDGQLGSHFRCLQSWCF*PMPPLS
Trigger: ACTTAGGGGCGGCATCGGTCAGAAGCACCAAGACTG...CAGGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp AAGCACCAGCTCACGTTGACGTGGGCGTGGTGTCGCTTCCCCTTCCGAGCAGTGCAGTCTTGGTGCTTCTaGCCGATGCCGCCCCTAAGT +
Preference number: 4 (lower is better)
Translates to: KHQLTLTWAWCRFPFRAVQSWCF*PMPPLS
Trigger: ACTTAGGGGCGGCATCGGTCAGAAGCACCAAGACTG...CACTGCTCGGAAGGGGAAGCGACACCACGCCCACGTCAACGTGAGCTGGTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp CATTGCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTCGCAGCGGACGCTGCTaGGGATGGCTCAGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: HCCHHLQGQLLTRMEKKRRSGRC*GWLSGG
Trigger: CCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCG...ACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp AAGCACCAGCTCACGTTGACGTGGGCGTGGTGTCGCTTCCCCTTCCGAGCAGTGTTTGTCCAGGAACGCTaGGCTGGGCTCAGACGGTCA +
Preference number: 4 (lower is better)
Translates to: KHQLTLTWAWCRFPFRAVFVQER*AGLRRS
Trigger: TGACCGTCTGAGCCCAGCTCAGCGTTCCTGGACAAA...CACTGCTCGGAAGGGGAAGCGACACCACGCCCACGTCAACGTGAGCTGGTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp CGGAAGAAAGGCCGGCCTGAGGACGGACAGCTGGGTTCTCACTTCAGGTGCCTGTTTGTCCAGGAACGCTaGGCTGGGCTCAGACGGTCA +
Preference number: 4 (lower is better)
Translates to: RKKGRPEDGQLGSHFRCLFVQER*AGLRRS
Trigger: TGACCGTCTGAGCCCAGCTCAGCGTTCCTGGACAAA...CAGGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGGGTAACGCTGAGGAGTaGGGCTGTTTGTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGGNAEE*GCLSRN
Trigger: GTTCCTGGACAAACAGCCTCACTCCTCAGCGTTACC...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGAGTGGGAGGGAACCTTaGCATTCGGAGAAATTCAAG +
Preference number: 4 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAESGREP*HSEKFK
Trigger: CTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACT...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCAGAGTGGCGACGGCGCTaGGAGCCAGAAAGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: CGDTARPVPRTTFQVRASEWRRR*EPERGQ
Trigger: TTGCCCCCTTTCTGGCTCTCAGCGCCGTCGCCACTC...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAAACAGCCACCAGCCAGTaGAACTTCCAGTCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: FQSVLREAWDPAGPHTPETATSQ*NFQSVL
Trigger: GAGCACTGACTGGAAGTTTCACTGGCTGGTGGCTGT...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGACAGCCACCAGCCAGTaGAACTTCCAGTCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGTATSQ*NFQSVL
Trigger: GAGCACTGACTGGAAGTTTCACTGGCTGGTGGCTGT...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTAAAGCCTGGCTCCACTaGGTTATCAACGGGTATTGT +
Preference number: 4 (lower is better)
Translates to: TYEARTPARQASTPRTAPKAWLH*VINGYC
Trigger: ACAATACCCGTTGATAACTCAGTGGAGCCAGGCTTT...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGCTCAACAGGGTATGGTaGGGCTGTGACACCCCGTGG +
Preference number: 4 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLLNRVW*GCDTPW
Trigger: CCACGGGGTGTCACAGCCTCACCATACCCTGTTGAG...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CTCCGCTCCTCTAGGATGAGCCCACTCCTGGCATCTGAAGTGGGACAATGCTGCGCCATGCTGCGGCACTaGGCTCCGAGCAGCTTAGCT +
Preference number: 4 (lower is better)
Translates to: LRSSRMSPLLASEVGQCCAMLRH*APSSLA
Trigger: AGCTAAGCTGCTCGGAGCTCAGTGCCGCAGCATGGC...GCAGCATTGTCCCACTTCAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCTCCCCTGACCTAGGCCAGGGAGACTaGGCTCCCCTGACTCATGGG +
Preference number: 4 (lower is better)
Translates to: VFSRSGQLPRPGRLSSPDLGQGD*APLTHG
Trigger: CCCATGAGTCAGGGGAGCTCAGTCTCCCTGGCCTAG...GTCAGGGGAGCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGGCAGCAATAGGGGGCTaGTGGTGTCTGCAACCCGCA +
Preference number: 4 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLAAIGG*WCLQPA
Trigger: TGCGGGTTGCAGACACCAGCAGCCCCCTATTGCTGC...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
CDS-3UTR GCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGGGAGGACACCTGACGTaGAGCAATAGGGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWGGHLT*SNRGLL
Trigger: CAGCAGCCCCCTATTGCTGCACGTCAGGTGTCCTCC...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
CDS-3UTR GCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAAGGTCATGGATGCTGCTaGATCTCCTGCAACGCACAG +
Preference number: 4 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEGHGCC*ISCNAQ
Trigger: CTGTGCGTTGCAGGAGATGCAGCAGCATCCATGACC...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
CDS-3UTR GCA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATGGTCATGGATGCTGCTaGATCTCCTGCAACGCACAG +
Preference number: 4 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDGHGCC*ISCNAQ
Trigger: CTGTGCGTTGCAGGAGATGCAGCAGCATCCATGACC...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
CDS-3UTR GCA 90 bp AACAGGGCCACCCCTTCCGTGCAAAGCCCTGCTGCAGCTCTGGACAGCCCCCAATGCGGTCATGGATGCTaGTGCATCTCCTGCAACGCA +
Preference number: 4 (lower is better)
Translates to: NRATPSVQSPAAALDSPQCGHGC*CISCNA
Trigger: TGCGTTGCAGGAGATGCAGCAGCATCCATGACCGCA...TTGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503128.5
CDS-3UTR GCA 90 bp CTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGGCCTCATGCAACACTCTGATGGGTTaGGGTCATGGATGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LSSPDSWAGLDPATLASCNTLMG*GHGCCC
Trigger: GCAGCAGCATCCATGACCGCAACCCATCAGAGTGTT...GCATGAGGCCAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420906.6
CDS-3UTR GCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGGCCGAGGATTTCTGGTaGCTGCTTCATCTTTATGCA +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWAEDFW*LLHLYA
Trigger: TGCATAAAGATGAAGCAGGCACCAGAAATCCTCGGC...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGGCCGAGGATTTCTGGTaGCTGCTTCATCTTTATGCA +
Preference number: 4 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAEAEDFW*LLHLYA
Trigger: TGCATAAAGATGAAGCAGGCACCAGAAATCCTCGGC...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATTCTTCCCGTTGGCACTaGCGAGGATTTCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDSSRWH*RGFLVP
Trigger: AGGCACCAGAAATCCTCGGCAGTGCCAACGGGAAGA...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTTCTTCCCGTTGGCACTaGCGAGGATTTCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPSSRWH*RGFLVP
Trigger: AGGCACCAGAAATCCTCGGCAGTGCCAACGGGAAGA...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTGCATGACCCCCTCCTaGAGGCTACTGGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTCMTPS*RLLESW
Trigger: CCAGCTCTCCAGTAGCCTGCAGGAGGGGGTCATGCA...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GCTATCAGACAGGAGCCTCTCCAGCGAGGGGAATCCGTGGCTTTACAGCCCTCCTGCATGACCCCCTCCTaGAGGCTACTGGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: AIRQEPLQRGESVALQPSCMTPS*RLLESW
Trigger: CCAGCTCTCCAGTAGCCTGCAGGAGGGGGTCATGCA...GGAGGGCTGTAAAGCCACGGATTCCCCTCGCTGGAGAGGCTCCTGTCTGATAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTTGGCCGTTAAACTTCTaGATGACCCCCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPWPLNF*MTPSCR
Trigger: CCTGCAGGAGGGGGTCATGCAGAAGTTTAACGGCCA...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GGGAGACTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGGCCCAGTTTGGCATCGTGTaGGCCGGGTTCTCCATTAAA +
Preference number: 4 (lower is better)
Translates to: GRLSSPDSWAGLDPATLAQFGIV*AGFSIK
Trigger: TTTAATGGAGAACCCGGCGCACACGATGCCAAACTG...GGCCAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp CCAGGGAGACTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGGCTTCGACAAGGCCCTaGTCCAGCAAGGAGTCATAT +
Preference number: 4 (lower is better)
Translates to: PGRLSSPDSWAGLDPATLASTRP*SSKESY
Trigger: ATATGACTCCTTGCTGGAGCAGGGCCTTGTCGAAGC...CAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGATCTGCAGAAACCATaGAAGGCCACCAAGGGTAAC +
Preference number: 4 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYDLQKP*KATKGN
Trigger: GTTACCCTTGGTGGCCTTGCATGGTTTCTGCAGATC...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GTAGGACCGCCCGTCCGGGGTGCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTGCTCCTCCACTGACATaGTTGCAGCTTCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: VGPPVRGAAEGCPVLVLLAPPLT*LQLLLL
Trigger: AAGCAGAAGAAGCTGCAAGCATGTCAGTGGAGGAGC...AAGGAGCACCAGGACGGGACAGCCTTCAGCTGCACCCCGGACGGGCGGTCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACTTCTCCCAAAGACTCTaGAGCAATGCCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYFSQRL*SNASLL
Trigger: AAGGAGGCTGGCATTGCTGCAGAGTCTTTGGGAGAA...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGACCAAAAACTGGGATaGTGCATCTCCCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYDQKLG*CISLPA
Trigger: AGCAGGAAGGGAGATGCAGCATCCCAGTTTTTGGTC...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GGGAGACTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGGCCCTTGGTGTTGTAGCGTaGTCTCTGCTTCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: GRLSSPDSWAGLDPATLALGVVA*SLLLTQ
Trigger: CTGAGTGAGAAGCAGAGAGCACGCTACAACACCAAG...GGCCAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGAGTTTGTGTTTCGTCTaGACTTTCGTATGGGGACTC +
Preference number: 4 (lower is better)
Translates to: LAARAGSSGPVHARPLPQSLCFV*TFVWGL
Trigger: GAGTCCCCATACGAAAGTGCAGACGAAACACAAACT...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTCACAGAGCAGGAGGCTaGCCGGCTTCTCACACAGCT +
Preference number: 4 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTHRAGG*PASHTA
Trigger: AGCTGTGTGAGAAGCCGGGCAGCCTCCTGCTCTGTG...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTCACAGAGCAGGAGGCTaGCCGGCTTCTCACACAGCT +
Preference number: 4 (lower is better)
Translates to: GHVGKGTHGAPFSGCSRLHRAGG*PASHTA
Trigger: AGCTGTGTGAGAAGCCGGGCAGCCTCCTGCTCTGTG...AAGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CGGGGTGCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGCACAGAGCAGGAGGCTaGCCGGCTTCTCACACAGCT +
Preference number: 4 (lower is better)
Translates to: RGAAEGCPVLVLLTERIGHRAGG*PASHTA
Trigger: AGCTGTGTGAGAAGCCGGGCAGCCTCCTGCTCTGTG...CCCAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTTCAGCTGCACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp CTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGTGCAGAACTTGCGGTCCAGCCCTGCAGTCATTaGAGAACCAGCTGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: LAKAQAGQVVGLGAELAVQPCSH*RTSCRQ
Trigger: CTGACGGCAGCTGGTTCTGCAATGACTGCAGGGCTG...GACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCGCTTCTTCCCAGCCCTaGAGTCATTGCAGAACCAGC +
Preference number: 4 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPASSQP*SHCRTS
Trigger: GCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAGC...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTTGTATGGTGGGGGCTTaGGCTCGCTCTCCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPCMVGA*ARSPVF
Trigger: AAACACAGGAGAGCGAGCGCAAGCCCCCACCATACA...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATTGTATGGTGGGGGCTTaGGCTCGCTCTCCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDCMVGA*ARSPVF
Trigger: AAACACAGGAGAGCGAGCGCAAGCCCCCACCATACA...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTACCCGCGGGACACACCTaGGGGTGGCACTCAAACATC +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVPAGHT*GWHSNI
Trigger: GATGTTTGAGTGCCACCCGCAGGTGTGTCCCGCGGG...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGTGCAGAACTTGCGGTCCCCCGAGGAATCCACTaGAATTGGAGGCTCCACACC +
Preference number: 4 (lower is better)
Translates to: LAKAQAGQVVGLGAELAVPRGIH*NWRLHT
Trigger: GGTGTGGAGCCTCCAATTGCAGTGGATTCCTCGGGG...GACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGATCACACAGCACCAGCTaGCCGCCATCACCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRSHSTS*PPSPQR
Trigger: CCGCTGCGGTGATGGCGGGCAGCTGGTGCTGTGTGA...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTCCTTGGTGCAGAACTTaGGGTCACACAGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPPWCRT*GHTAPA
Trigger: AGCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGG...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACTCCGGGCCAGTTCATaGTCGCCCTCTCCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLLRASS*SPSPAG
Trigger: GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAG...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTCAGACGGTCATCAGTaGAGACGCAGCGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTSDGHQ*RRSGRC
Trigger: GCAGCGTCCGCTGCGTCTGCACTGATGACCGTCTGA...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACAGTTGTCACTTCCTGTaGTCTAAGCAGACTGCGGTC +
Preference number: 4 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYSCHFL*SKQTAV
Trigger: GACCGCAGTCTGCTTAGAGCACAGGAAGTGACAACT...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCCAGGTCCAAAGACACTaGAGTTTTTACCAAGGCATA +
Preference number: 4 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGQVQRH*SFYQGI
Trigger: TATGCCTTGGTAAAAACTGCAGTGTCTTTGGACCTG...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGGAAACTTCCAGTCAGTaGTCAGGGAGGCGTGGGACC +
Preference number: 4 (lower is better)
Translates to: KHCEGDPASHGRVSPEERETSSQ*SGRRGT
Trigger: GGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGAGACAAGACAGACAAACACTaGGAAGGGGACCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: VCTFVWGLRGLVSRAVRDKTDKH*EGDPAS
Trigger: GCTGGCTGGGTCCCCTTCGCAGTGTTTGTCTGTCTT...GTCTCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCTGGAAGATGGGCACTaGACACGCCGGGGTTTAGAT +
Preference number: 4 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDLEDGH*TRRGLD
Trigger: ATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAG...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AACAGGGCCACCCCTTCCGTGCAAAGCCCTGCTGCAGCTCTGGACAGCCCCCAAAGTGCTGAGTTCACTTaGCCCTGCCCACCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: NRATPSVQSPAAALDSPQSAEFT*PCPPSQ
Trigger: TTGGGAAGGTGGGCAGGGGCAAGTGAACTCAGCACT...TTGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTGCAATTCCAACACTTTaGGAGGACGAGGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: AEDGSVVGRRSLPRRPVRAIPTL*EDEAGR
Trigger: TCTACCTGCCTCGTCCTCCCAAAGTGTTGGAATTGC...ACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382895.7
CDS-3UTR CCA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGACTGCCGAGGATTTCTaGTGCCTGCTTCATCTTTAT +
Preference number: 4 (lower is better)
Translates to: LAARAGSSGPVHARPLPQTAEDF*CLLHLY
Trigger: ATAAAGATGAAGCAGGCACCAGAAATCCTCGGCAGT...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCTCGGAGTCTTCCCGTTaGCACTGCCGAGGATTTCTG +
Preference number: 4 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPSESSR*HCRGFL
Trigger: CAGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGA...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AACAGGGCCACCCCTTCCGTGCAAAGCCCTGCTGCAGCTCTGGACAGCCCCCAATCGGAGTCTTCCCGTTaGCACTGCCGAGGATTTCTG +
Preference number: 4 (lower is better)
Translates to: NRATPSVQSPAAALDSPQSESSR*HCRGFL
Trigger: CAGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGA...TTGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp CCAGGGAGACTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGAGGCTACTGGAGAGCTaGGCTTTGCTGAGGAACACA +
Preference number: 4 (lower is better)
Translates to: PGRLSSPDSWAGLDPATLRLLES*ALLRNT
Trigger: TGTGTTCCTCAGCAAAGCCCAGCTCTCCAGTAGCCT...CAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGAAGGGCAGGGCGTCGTaGCCGTTAAACTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKKGRAS*PLNFCM
Trigger: CATGCAGAAGTTTAACGGCCACGACGCCCTGCCCTT...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp CCAGGGAGACTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGTTTCAGCTTGTCGGCTaGAATAAAGGGCAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: PGRLSSPDSWAGLDPATLFQLVG*NKGQGV
Trigger: GACGCCCTGCCCTTTATTCCAGCCGACAAGCTGAAA...CAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTTCCGCCTTCTCTTCATaGGAATGCACTCTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: TYEARTPARQASTPRTAPSAFSS*ECTLLS
Trigger: TGAGAGAAGAGTGCATTCCCATGAAGAGAAGGCGGA...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AAGCACCAGCTCACGTTGACGTGGGCGTGGTGTCGCTTCCCCTTCCGAGCAGTGACCCTACTCCTCTTCTaGGGTCAGCCTCTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: KHQLTLTWAWCRFPFRAVTLLLF*GQPLPS
Trigger: AGACGGCAGAGGCTGACCCCAGAAGAGGAGTAGGGT...CACTGCTCGGAAGGGGAAGCGACACCACGCCCACGTCAACGTGAGCTGGTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAAGTGGCATGGAGACTGTaGTCTTCTTCCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEVAWRL*SSSSQE
Trigger: CTCCTGGGAGGAAGAAGACCACAGTCTCCATGCCAC...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CCAGGGAGACTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGTCCTGCTTCGTGGCATaGAGACTGTGGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PGRLSSPDSWAGLDPATLSCFVA*RLWSSS
Trigger: GGAAGAAGACCACAGTCTCCATGCCACGAAGCAGGA...CAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTCAGAAGACCAAAAACTaGGATGCTGCATCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: TYEARTPARQASTPRTAPQKTKN*DAASPF
Trigger: GAAGGGAGATGCAGCATCCCAGTTTTTGGTCTTCTG...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGCAGAAGACCAAAAACTaGGATGCTGCATCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWQKTKN*DAASPF
Trigger: GAAGGGAGATGCAGCATCCCAGTTTTTGGTCTTCTG...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CGGAAGAAAGGCCGGCCTGAGGACGGACAGCTGGGTTCTCACTTCAGGTGCCTGGTCTGCACTTTCGTATaGGGACTCCGAGGGCTCGTC +
Preference number: 4 (lower is better)
Translates to: RKKGRPEDGQLGSHFRCLVCTFV*GLRGLV
Trigger: GACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGAC...CAGGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTACACATACTCCTTTTTaGCAGTCACTCCTCGCTCAG +
Preference number: 4 (lower is better)
Translates to: TYEARTPARQASTPRTAPTHTPF*QSLLAQ
Trigger: CTGAGCGAGGAGTGACTGCCAAAAAGGAGTATGTGT...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGACACATACTCCTTTTTaGCAGTCACTCCTCGCTCAG +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWTHTPF*QSLLAQ
Trigger: CTGAGCGAGGAGTGACTGCCAAAAAGGAGTATGTGT...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAAGAAGGGTTGGAAGCATaGCAGCTCACACAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEEGLEA*QLTQLW
Trigger: CCACAGCTGTGTGAGCTGCCATGCTTCCAACCCTTC...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGGAAGGGTTGGAAGCATaGCAGCTCACACAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGEGLEA*QLTQLW
Trigger: CCACAGCTGTGTGAGCTGCCATGCTTCCAACCCTTC...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTACGTTGACGTGGGCGTaGTGTCGCTTCCCCTTCCGA +
Preference number: 4 (lower is better)
Translates to: GHVGKGTHGAPFSGCSRLTLTWA*CRFPFR
Trigger: TCGGAAGGGGAAGCGACACCACGCCCACGTCAACGT...AAGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTACAGCTCACGTTGACGTaGGCGTGGTGTCGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVQLTLT*AWCRFP
Trigger: GGGGAAGCGACACCACGCCCACGTCAACGTGAGCTG...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGACCCAAATGATATCCTaGAAGTGCAGCTTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LAARAGSSGPVHARPLPQTQMIS*KCSFFP
Trigger: TGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGT...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATGGTCGTCGAGGTCTTTaGTCTATCCCCGAGGAATCC +
Preference number: 4 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDGRRGL*SIPEES
Trigger: GGATTCCTCGGGGATAGACCAAAGACCTCGACGACC...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGGGTCGTCGAGGTCTTTaGTCTATCCCCGAGGAATCC +
Preference number: 4 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGGRRGL*SIPEES
Trigger: GGATTCCTCGGGGATAGACCAAAGACCTCGACGACC...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGAGACAGGTGGTAGGCCTTaGTGCAGAACTTGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: SSALSYGDSEGSSPGLSETGGRP*CRTCGH
Trigger: GTGACCGCAAGTTCTGCACCAAGGCCTACCACCTGT...CTCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCACAGGTGGTAGGCCTTaGTGCAGAACTTGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPTGGRP*CRTCGH
Trigger: GTGACCGCAAGTTCTGCACCAAGGCCTACCACCTGT...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGAGGCCAAGCGGCCGCCTaGCGCTATTTGCCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRGQAAA*RYLPSV
Trigger: CACAGAGGGCAAATAGCGCCAGGCGGCCGCTTGGCC...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGCCTGGCGGCTCGAGCTaGGTCCTCCGGGCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWPGGSS*VLRASS
Trigger: TGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAGG...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTGTACGTCTGTGTCCTaGCGGCTCGAGCTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTCTSVS*RLELGP
Trigger: AGGACCCAGCTCGAGCCGCCAGGACACAGACGTACA...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGTGTACGTCTGTGTCCTaGCGGCTCGAGCTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLCTSVS*RLELGP
Trigger: AGGACCCAGCTCGAGCCGCCAGGACACAGACGTACA...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAGGATGGCTCAGTGGTaGGGAGGCGCTCCCTCCCGA +
Preference number: 4 (lower is better)
Translates to: LRARKGATRRRVSSDPWERMAQW*GGAPSR
Trigger: TCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCT...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTTTCTAGCGACCCTTaGGAAAAGCCTACGCTACAC +
Preference number: 4 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYVSSDP*EKPTLH
Trigger: GTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAAC...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGAGAGATGGAAGCCACTCTaGGTGGCAGGAGAGCTAGAC +
Preference number: 4 (lower is better)
Translates to: SSALSYGDSEGSSPGLSERWKPL*VAGELD
Trigger: GTCTAGCTCTCCTGCCACCCAGAGTGGCTTCCATCT...CTCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTCACAGAGTGCTGAGATaGAAGCCACTCTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPHRVLR*KPLWVA
Trigger: TGCCACCCAGAGTGGCTTCCATCTCAGCACTCTGTG...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGGCCCCTCAGGACACGTaGGCAAAGGCACACATGGTG +
Preference number: 4 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLAPQDT*AKAHMV
Trigger: CACCATGTGTGCCTTTGCCCACGTGTCCTGAGGGGC...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GTAGGACCGCCCGTCCGGGGTGCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTACAGCTCGTTTCCCCTaGGTCCTCTGTGTAGTTAAC +
Preference number: 4 (lower is better)
Translates to: VGPPVRGAAEGCPVLVLLTARFP*VLCVVN
Trigger: GTTAACTACACAGAGGACCCAGGGGAAACGAGCTGT...AAGGAGCACCAGGACGGGACAGCCTTCAGCTGCACCCCGGACGGGCGGTCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGCGTGGTCAGCCCCAGTaGCGAGAAACCCTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWRGQPQ*RETLQA
Trigger: AGCTTGCAGGGTTTCTCGCCACTGGGGCTGACCACG...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATTCACAGCTGGGGGCGTaGTCAGCCCCAGTGGCGAGA +
Preference number: 4 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYSQLGA*SAPVAR
Trigger: TCTCGCCACTGGGGCTGACCACGCCCCCAGCTGTGA...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTTCCTCAGAACAAAGCTaGGCAGGGCCGAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GHVGKGTHGAPFSGCSRLSSEQS*AGPRAS
Trigger: GCTGGCTCTCGGCCCTGCCCAGCTTTGTTCTGAGGA...AAGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGTCCTCAGAACAAAGCTaGGCAGGGCCGAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLSSEQS*AGPRAS
Trigger: GCTGGCTCTCGGCCCTGCCCAGCTTTGTTCTGAGGA...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GACGCAGCGGACGCTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGTTTAGGTGCAGATGCTaGTTTCGGATGCCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: DAADAAEDGSVVGRRSLPFRCRC*FRMPRN
Trigger: ATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAA...CGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGAAAAATGCGGACACCTaGGGCAGGACACCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWKNADT*GRTPGC
Trigger: GCAGCCTGGTGTCCTGCCCCAGGTGTCCGCATTTTT...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCATGCTGGGGAGGAGCCTaGTCTGGCCGACTGCAGACA +
Preference number: 4 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPCWGGA*SGRLQT
Trigger: TGTCTGCAGTCGGCCAGACCAGGCTCCTCCCCAGCA...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp CTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGGCCTCATGCCTGACCTTCCTGCACTaGAAGGCCTACACTCCTCTA +
Preference number: 4 (lower is better)
Translates to: LSSPDSWAGLDPATLASCLTFLH*KAYTPL
Trigger: TAGAGGAGTGTAGGCCTTCCAGTGCAGGAAGGTCAG...GCATGAGGCCAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp CCCTGCAGAAAATCCCACTCGGAGGAGTGGTCGCTGAGGATTCAGAGTGGCAAGAGCTCCCCTGACTCATaGGCAGGCCTCGACCCCGCT +
Preference number: 4 (lower is better)
Translates to: PCRKSHSEEWSLRIQSGKSSPDS*AGLDPA
Trigger: AGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCT...CTTGCCACTCTGAATCCTCAGCGACCACTCCTCCGAGTGGGATTTTCTGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGTTGTCCATTTTCTTCTaGCTGAGACACATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWLSIFF*LRHISS
Trigger: GCTGCTGATGTGTCTCAGTCAGAAGAAAATGGACAA...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGGCCTCATGCCCACATAGAGAAAGGTaGACTTGGCTTTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: LSSPDSWAGLDPATLASCPHRER*TWLSAP
Trigger: AGGAGCGGAAAGCCAAGTTCACCTTTCTCTATGTGG...GCATGAGGCCAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR TCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGCCTCTGCCGTCTTTTaGGGAGTACTCTTCCCTATG +
Preference number: 4 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPASAVF*GVLFPM
Trigger: CATAGGGAAGAGTACTCCTCAAAAGACGGCAGAGGC...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp AACAGGGCCACCCCTTCCGTGCAAAGCCCTGCTGCAGCTCTGGACAGCCCCCAAGCCTCTGCCGTCTTTTaGGGAGTACTCTTCCCTATG +
Preference number: 4 (lower is better)
Translates to: NRATPSVQSPAAALDSPQASAVF*GVLFPM
Trigger: CATAGGGAAGAGTACTCCTCAAAAGACGGCAGAGGC...TTGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp AGCTGCCCGCCATCACCGCAGCGGAAGCACTCGTCCTCTGACTGCCTCTTCCCTGACTCCACTGTGACCTaGGCAGCTCTTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: SCPPSPQRKHSSSDCLFPDSTVT*AALQSP
Trigger: AGGAGATTGAAGAGCTGCTCAGGTCACAGTGGAGTC...AGGGAAGAGGCAGTCAGAGGACGAGTGCTTCCGCTGCGGTGATGGCGGGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGGACTCCACTGTGACCTaGGCAGCTCTTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKDSTVT*AALQSP
Trigger: AGGAGATTGAAGAGCTGCTCAGGTCACAGTGGAGTC...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCAGCAGACTCCACTGTaGCCTGAGCAGCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPQQTPL*PEQLFN
Trigger: ATTGAAGAGCTGCTCAGGTCACAGTGGAGTCTGCTG...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACTGGCCGTTTTGTCAGTaGTTGTGTCTCTCTTCCGAA +
Preference number: 4 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYWPFCQ*LCLSSE
Trigger: TTCGGAAGAGAGACACAATCACTGACAAAACGGCCA...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGGCTAAACCCAAGAGCTaGAGATGCTGCCGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: KHCEGDPASHGRVSPEERAKPKS*RCCRGS
Trigger: GCTTCCACGGCAGCATCTTCAGCTCTTGGGTTTAGC...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGGGTTCAAATCCAACTTaGCTGGTGTGGGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKGSNPT*LVWAPT
Trigger: TGTGGGAGCCCACACCAGTCAAGTTGGATTTGAACC...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp AAGCACCAGCTCACGTTGACGTGGGCGTGGTGTCGCTTCCCCTTCCGAGCAGTGACTGAGTGTGTACGATaGTACGCCACCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KHQLTLTWAWCRFPFRAVTECVR*YATCSS
Trigger: GCTGCTGCAGGTGGCGTATCATCGTACACACTCAGT...CACTGCTCGGAAGGGGAAGCGACACCACGCCCACGTCAACGTGAGCTGGTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312087.10
CDS-3UTR TCA 90 bp GTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGAGACCACACGAAACATGAGTaGATCCCTGAGGCACACTCG +
Preference number: 4 (lower is better)
Translates to: VCTFVWGLRGLVSRAVRDHTKHE*IPEAHS
Trigger: CGAGTGTGCCTCAGGGATTCACTCATGTTTCGTGTG...GTCTCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR TCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTTCTCGGGCTTCCCTCTaGAGCTTAATTTCACGAAAA +
Preference number: 4 (lower is better)
Translates to: TYEARTPARQASTPRTAPSRASL*SLISRK
Trigger: TTTTCGTGAAATTAAGCTTCAGAGGGAAGCCCGAGA...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GACGCAGCGGACGCTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGGCACTTAGGGATTTCTaGAATATCCGCTGTGTAGAT +
Preference number: 4 (lower is better)
Translates to: DAADAAEDGSVVGRRSLPALRDF*NIRCVD
Trigger: ATCTACACAGCGGATATTTCAGAAATCCCTAAGTGC...CGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GGACAGGTGGTAGGCCTTGGTGCAGAACTTGCGGTCACACAGCACCAGCTGCCCTCTCGTGTGCGTGCTTaGTTCTCGCCATGCACTCCT +
Preference number: 4 (lower is better)
Translates to: GQVVGLGAELAVTQHQLPSRVRA*FSPCTP
Trigger: AGGAGTGCATGGCGAGAATCAAGCACGCACACGAGA...GGGCAGCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCCACACACGTCACAATaGTGCCAAGGACATTCCCAC +
Preference number: 4 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPPHTSQ*CQGHSH
Trigger: GTGGGAATGTCCTTGGCATCATTGTGACGTGTGTGG...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCACACACGTCACAATaGTGCCAAGGACATTCCCAC +
Preference number: 4 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEPHTSQ*CQGHSH
Trigger: GTGGGAATGTCCTTGGCATCATTGTGACGTGTGTGG...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCAGCTATTTGCCCTCTGTaGCTCTCCGCCAGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: CGDTARPVPRTTFQVRASAICPL*LSASPS
Trigger: GGAGGGGCTGGCGGAGAGTCACAGAGGGCAAATAGC...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GGACAGGTGGTAGGCCTTGGTGCAGAACTTGCGGTCACACAGCACCAGCTGCCCGGTAACGCTGAGGAGTaGGGCTGTTTGTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GQVVGLGAELAVTQHQLPGNAEE*GCLSRN
Trigger: GTTCCTGGACAAACAGCCTCACTCCTCAGCGTTACC...GGGCAGCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp CTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGTGCAGAACTTGCGGTCGGCAGAGGGCACATGTaGTCAGCAGAGACTGCATCT +
Preference number: 4 (lower is better)
Translates to: LAKAQAGQVVGLGAELAVGRGHM*SAETAS
Trigger: AGATGCAGTCTCTGCTGATCACATGTGCCCTCTGCC...GACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAAAAAAGCACCTGCTGCTaGATGTTCTCTCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEKSTCC*MFSPSL
Trigger: GAGGGAGGGAGAGAACATTCAGCAGCAGGTGCTTTT...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCAGGAGCATAAATCTATaGGCCGATCCAGTATTTTCT +
Preference number: 4 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGRSINL*ADPVFS
Trigger: AGAAAATACTGGATCGGCTCATAGATTTATGCTCCT...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAAGATGCCAAGGAATCCTaGGGGATTGGGGCGGTTTTT +
Preference number: 4 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEDAKES*GIGAVF
Trigger: AAAAACCGCCCCAATCCCTCAGGATTCCTTGGCATC...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAGAAGAAAGGCCGGCCTaGGGACGGACAGCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: LRARKGATRRRVSSDPWEEERPA*GRTAGF
Trigger: GAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTC...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGAGAAGAAAGGCCGGCCTaGGGACGGACAGCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPREERPA*GRTAGF
Trigger: GAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTC...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGAACTATCAAACCTGGTaGCAGCACCCAGTATTCCTA +
Preference number: 4 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAENYQTW*QHPVFL
Trigger: TAGGAATACTGGGTGCTGTCACCAGGTTTGATAGTT...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GGTGACTCTCCAGGGTCTCTGCAGAGCTACACAGTTTGGCCCTCCGCCTTCTCTCCTCCACGCACCAGGTaGCGTGACTCACTCGGAGAA +
Preference number: 4 (lower is better)
Translates to: GDSPGSLQSYTVWPSAFSPPRTR*RDSLGE
Trigger: TTCTCCGAGTGAGTCACGTCACCTGGTGCGTGGAGG...AGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTGCAGAGACCCTGGAGAGTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR TCA 90 bp GTCTGGAAGCAACAGGAATCAGGTGTGGTGTGTGAGTCGCCTTCCACCCCACCCGGTTGCCTAGGTCCCTaGCCTTCCTGCACTGGAAGG +
Preference number: 4 (lower is better)
Translates to: VWKQQESGVVCESPSTPPGCLGP*PSCTGR
Trigger: CCTTCCAGTGCAGGAAGGTCAGGGACCTAGGCAACC...GGGTGGGGTGGAAGGCGACTCACACACCACACCTGATTCCTGTTGCTTCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp CCCTGCAGAAAATCCCACTCGGAGGAGTGGTCGCTGAGGATTCAGAGTGGCAAGCTAGGCCAGGGAGACTaGGCTCCCCTGACTCATGGG +
Preference number: 4 (lower is better)
Translates to: PCRKSHSEEWSLRIQSGKLGQGD*APLTHG
Trigger: CCCATGAGTCAGGGGAGCTCAGTCTCCCTGGCCTAG...CTTGCCACTCTGAATCCTCAGCGACCACTCCTCCGAGTGGGATTTTCTGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp CCGCCTTCTGACTCAGCAAGAGTAAGGGGCCTGTCCAACCCTTGCCTCACTACCGGAGGACACCTGACGTaGAGCAATAGGGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PPSDSARVRGLSNPCLTTGGHLT*SNRGLL
Trigger: CAGCAGCCCCCTATTGCTGCACGTCAGGTGTCCTCC...GGTAGTGAGGCAAGGGTTGGACAGGCCCCTTACTCTTGCTGAGTCAGAAGGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420906.6
CDS-3UTR GCA 90 bp GGACAGGTGGTAGGCCTTGGTGCAGAACTTGCGGTCACACAGCACCAGCTGCCCTCTTCCCGTTGGCACTaGCGAGGATTTCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: GQVVGLGAELAVTQHQLPSSRWH*RGFLVP
Trigger: AGGCACCAGAAATCCTCGGCAGTGCCAACGGGAAGA...GGGCAGCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGTCTTCCCGTTGGCACTaGCGAGGATTTCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWSSRWH*RGFLVP
Trigger: AGGCACCAGAAATCCTCGGCAGTGCCAACGGGAAGA...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGCATGACCCCCTCCTaGAGGCTACTGGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVCMTPS*RLLESW
Trigger: CCAGCTCTCCAGTAGCCTGCAGGAGGGGGTCATGCA...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAAGCTTCGACAAGGCCCTaGTCCAGCAAGGAGTCATAT +
Preference number: 4 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEASTRP*SSKESY
Trigger: ATATGACTCCTTGCTGGAGCAGGGCCTTGTCGAAGC...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGCTTAGACACAAGAGCTaGTTCGACAAGGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGLRHKS*FDKALL
Trigger: GAGCAGGGCCTTGTCGAAGCAGCTCTTGTGTCTAAG...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGAGTCTGGGGTCAGCCTCTaGCGTCTTTTGAGGAGTACT +
Preference number: 4 (lower is better)
Translates to: SSALSYGDSEGSSPGLSESGVSL*RLLRST
Trigger: AGTACTCCTCAAAAGACGGCAGAGGCTGACCCCAGA...CTCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR GCA 90 bp AACAGGGCCACCCCTTCCGTGCAAAGCCCTGCTGCAGCTCTGGACAGCCCCCAATCTGGGGTCAGCCTCTaGCGTCTTTTGAGGAGTACT +
Preference number: 4 (lower is better)
Translates to: NRATPSVQSPAAALDSPQSGVSL*RLLRST
Trigger: AGTACTCCTCAAAAGACGGCAGAGGCTGACCCCAGA...TTGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCTCTGGGGTCAGCCTCTaGCGTCTTTTGAGGAGTACT +
Preference number: 4 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPSGVSL*RLLRST
Trigger: AGTACTCCTCAAAAGACGGCAGAGGCTGACCCCAGA...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGTGCAGAACTTGCGGTCCTGCATCTCCCTTCCTaGTTCGTGGCATGGAGACTG +
Preference number: 4 (lower is better)
Translates to: LAKAQAGQVVGLGAELAVLHLPS*FVAWRL
Trigger: CAGTCTCCATGCCACGAAGCAGGAAGGGAGATGCAG...GACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGCTTGAGCGAGGAGGCTaGCTCCATGGCCTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: KHCEGDPASHGRVSPEERLERGG*LHGLVR
Trigger: TCTTACAAGGCCATGGAGGCAGCCTCCTCGCTCAAG...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACATTGCAGAACCAGCTaGCGTCAGGCATCTCGATGT +
Preference number: 4 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEHCRTS*RQASRC
Trigger: ACATCGAGATGCCTGACGGCAGCTGGTTCTGCAATG...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCATTGCAGAACCAGCTaGCGTCAGGCATCTCGATGT +
Preference number: 4 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDHCRTS*RQASRC
Trigger: ACATCGAGATGCCTGACGGCAGCTGGTTCTGCAATG...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAAGGGATGGCAAACTTCTaGCGGCCACCATCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEGMANF*RPPSVV
Trigger: AACTACAGATGGTGGCCGGCAGAAGTTTGCCATCCC...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCCCACGTTATTCACCTTGATGTaGTTGTATGGTGGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: QCSGRRGTLQGHTPLNPTLFTLM*LYGGGL
Trigger: CAAGCCCCCACCATACAAGCACATCAAGGTGAATAA...CGTGGGGTTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTTCGTTCTCGTGTGCGTaGTTGATTCTCGCCATGCAC +
Preference number: 4 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPSFSCA*LILAMH
Trigger: GTGCATGGCGAGAATCAAGCACGCACACGAGAACGA...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTCCCCGAGGAATCCACTaGAATTGGAGGCTCCACACC +
Preference number: 4 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTPRGIH*NWRLHT
Trigger: GGTGTGGAGCCTCCAATTGCAGTGGATTCCTCGGGG...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CGGGGTGCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGCCCCGAGGAATCCACTaGAATTGGAGGCTCCACACC +
Preference number: 4 (lower is better)
Translates to: RGAAEGCPVLVLLTERIGPRGIH*NWRLHT
Trigger: GGTGTGGAGCCTCCAATTGCAGTGGATTCCTCGGGG...CCCAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTTCAGCTGCACCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp CATTGCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTTCACACAGCACCAGCTaGCCGCCATCACCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: HCCHHLQGQLLTRMEKKRSHSTS*PPSPQR
Trigger: CCGCTGCGGTGATGGCGGGCAGCTGGTGCTGTGTGA...ACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGGGTGGTAGGCCTTGGTaGAGAACTTGCGGTCACACA +
Preference number: 4 (lower is better)
Translates to: KHCEGDPASHGRVSPEERGGRPW*RTCGHT
Trigger: TGTGTGACCGCAAGTTCTGCACCAAGGCCTACCACC...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGTCCCGAAGGGCCGCTTaGCAAGGCCCAGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWSRRAA*QGPGRT
Trigger: TGTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGA...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCCTCCGGGCCAGTTCATaGTCGCCCTCTCCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLLRASS*SPSPAG
Trigger: GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAG...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATCAGACGGTCATCAGTaGAGACGCAGCGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVSDGHQ*RRSGRC
Trigger: GCAGCGTCCGCTGCGTCTGCACTGATGACCGTCTGA...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGAGCCCCCTTCTCAGGGTaGTCCAGACTTCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRAPFSG*SRLPRV
Trigger: GACCCTGGGAAGTCTGGAGCACCCTGAGAAGGGGGC...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TGTGCTTGTATGGTGGGGGCTTGCGCTCGCTCTCCTGTGTTTCTCGGGCTTCCCCAAAGGCACACATGGTaGCCCCTTCTCAGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: CACMVGACARSPVFLGLPQRHTW*PLLRVL
Trigger: GAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTG...GGGAAGCCCGAGAAACACAGGAGAGCGAGCGCAAGCCCCCACCATACAAGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTTTCTGTAAACTTCTCTaGAAGATGGATGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: TYEARTPARQASTPRTAPFCKLL*KMDVSP
Trigger: GGGGGACACATCCATCTTGCAGAGAAGTTTACAGAA...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATGGGTTTAGGTGCAGATaGTGGTTTCGGATGCCAAGG +
Preference number: 4 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDGFRCR*WFRMPR
Trigger: CCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AGCTGCCCGCCATCACCGCAGCGGAAGCACTCGTCCTCTGACTGCCTCTTCCCTGGGTTTAGGTGCAGATaGTGGTTTCGGATGCCAAGG +
Preference number: 4 (lower is better)
Translates to: SCPPSPQRKHSSSDCLFPGFRCR*WFRMPR
Trigger: CCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC...AGGGAAGAGGCAGTCAGAGGACGAGTGCTTCCGCTGCGGTGATGGCGGGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATGGTTCTCACTTCAGGTaGCTGAAGAGTTTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDGSHFR*LKSFPH
Trigger: GTGGGGGAAACTCTTCAGGCACCTGAAGTGAGAACC...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGGGCAGGACACCAGGCTaGTCCCCGACATTAAGACAA +
Preference number: 4 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWGRTPG*SPTLRQ
Trigger: TTGTCTTAATGTCGGGGAGCAGCCTGGTGTCCTGCC...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp CACAGGAGCAGCAAGCTTGCTCCTGACAGCATGGCTCTCACACAGCATCCTCCCCCCAGCTCACAGCCCTaGCATCACAGGTGCCACACA +
Preference number: 4 (lower is better)
Translates to: HRSSKLAPDSMALTQHPPPSSQP*HHRCHT
Trigger: TGTGTGGCACCTGTGATGGCAGGGCTGTGAGCTGGG...GGGAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AACAGGGCCACCCCTTCCGTGCAAAGCCCTGCTGCAGCTCTGGACAGCCCCCAAGATTGTGCCACTTACTaGACTCCAGCCTGGCCAACA +
Preference number: 4 (lower is better)
Translates to: NRATPSVQSPAAALDSPQDCATY*TPAWPT
Trigger: TGTTGGCCAGGCTGGAGTGCAGTAAGTGGCACAATC...TTGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp CACAGGAGCAGCAAGCTTGCTCCTGACAGCATGGCTCTCACACAGCATCCTCCCGTGAGGCCAGGTGGCTaGTGCTCCCAATTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: HRSSKLAPDSMALTQHPPVRPGG*CSQFKA
Trigger: GGCCTTGAATTGGGAGCAGCAGCCACCTGGCCTCAC...GGGAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp CCCTGCAGAAAATCCCACTCGGAGGAGTGGTCGCTGAGGATTCAGAGTGGCAAGCTTAGAACACTGCGGTaGGTCGCATCCTCGGCGGGC +
Preference number: 4 (lower is better)
Translates to: PCRKSHSEEWSLRIQSGKLRTLR*VASSAG
Trigger: GCCCGCCGAGGATGCGACGCACCGCAGTGTTCTAAG...CTTGCCACTCTGAATCCTCAGCGACCACTCCTCCGAGTGGGATTTTCTGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514045.5
CDS-3UTR CCA 90 bp CAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCCCACGACTGCCGAGGATTTCTaGTGCCTGCTTCATCTTTAT +
Preference number: 4 (lower is better)
Translates to: QCSGRRGTLQGHTPLNPTTAEDF*CLLHLY
Trigger: ATAAAGATGAAGCAGGCACCAGAAATCCTCGGCAGT...CGTGGGGTTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGAGGCTACTGGAGAGCTaGGCTTTGCTGAGGAACACA +
Preference number: 4 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGRLLES*ALLRNT
Trigger: TGTGTTCCTCAGCAAAGCCCAGCTCTCCAGTAGCCT...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGATAGCTGTGAAGGAGTaGATCTGCAGAAACCATGCA +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWIAVKE*ICRNHA
Trigger: TGCATGGTTTCTGCAGATCCACTCCTTCACAGCTAT...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTTATCCAAGCTCTTTCTaGGGCGTCACCAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: AEDGSVVGRRSLPRRPVRYPSSF*GVTKEL
Trigger: CAGTTCTTTGGTGACGCCCCAGAAAGAGCTTGGATA...ACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCAGAGCTACACAGTTTaGCCCTCCGCCTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPQSYTV*PSAFSS
Trigger: TGAAGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTG...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AACAGGGCCACCCCTTCCGTGCAAAGCCCTGCTGCAGCTCTGGACAGCCCCCAACAGAGCTACACAGTTTaGCCCTCCGCCTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: NRATPSVQSPAAALDSPQQSYTV*PSAFSS
Trigger: TGAAGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTG...TTGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGAGACCTCATTCTCAGTTAAGGGTGGCATGGAGACTGTaGTCTTCTTCCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GTPRARLPGCPRPHSQLRVAWRL*SSSSQE
Trigger: CTCCTGGGAGGAAGAAGACCACAGTCTCCATGCCAC...CCTTAACTGAGAATGAGGTCTCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511904.1
CDS-3UTR CCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTTCCTGCTTCGTGGCATaGAGACTGTGGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPSCFVA*RLWSSS
Trigger: GGAAGAAGACCACAGTCTCCATGCCACGAAGCAGGA...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AACAGGGCCACCCCTTCCGTGCAAAGCCCTGCTGCAGCTCTGGACAGCCCCCAATCCTGCTTCGTGGCATaGAGACTGTGGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: NRATPSVQSPAAALDSPQSCFVA*RLWSSS
Trigger: GGAAGAAGACCACAGTCTCCATGCCACGAAGCAGGA...TTGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGAGACCTCCTGCTTCGTGGCATaGAGACTGTGGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SALSYGDSEGSSPGLSETSCFVA*RLWSSS
Trigger: GGAAGAAGACCACAGTCTCCATGCCACGAAGCAGGA...GGTCTCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR CCA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCTCCCTTCCTGCTTCGTaGCATGGAGACTGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPSLPAS*HGDCGL
Trigger: AAGACCACAGTCTCCATGCCACGAAGCAGGAAGGGA...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGTCCCTTCCTGCTTCGTaGCATGGAGACTGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKSLPAS*HGDCGL
Trigger: AAGACCACAGTCTCCATGCCACGAAGCAGGAAGGGA...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCAGGAGGCTGCCTCCATaGCCTTGTAAGAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPRRLPP*PCKSLF
Trigger: GAACAAGCTCTTACAAGGCCATGGAGGCAGCCTCCT...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGAGGAGGCTGCCTCCATaGCCTTGTAAGAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGRRLPP*PCKSLF
Trigger: GAACAAGCTCTTACAAGGCCATGGAGGCAGCCTCCT...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GACGCAGCGGACGCTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGCTCGCTCAGACTTTTTaGATGAGACAGATACTTCAG +
Preference number: 4 (lower is better)
Translates to: DAADAAEDGSVVGRRSLPLAQTF*MRQILQ
Trigger: CTGAAGTATCTGTCTCATCCAAAAAGTCTGAGCGAG...CGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCACCAAGGCAGGCGAGGTaGAAAGCTCCGCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: CGDTARPVPRTTFQVRASPRQAR*KAPQQG
Trigger: ACCCTGCTGCGGAGCTTTCCACCTCGCCTGCCTTGG...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGTTCCGAGCAGTGAAGTaGGCAGTGCAGATGATGCTG +
Preference number: 4 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGFRAVK*AVQMML
Trigger: CAGCATCATCTGCACTGCCCACTTCACTGCTCGGAA...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGACCCAAATGATATCCTaGAAGTGCAGCTTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAETQMIS*KCSFFP
Trigger: TGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGT...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GGACAGGTGGTAGGCCTTGGTGCAGAACTTGCGGTCACACAGCACCAGCTGCCCGGAATCCACTGCAATTaGAGGCTCCACACCGGCAGA +
Preference number: 4 (lower is better)
Translates to: GQVVGLGAELAVTQHQLPGIHCN*RLHTGR
Trigger: TCTGCCGGTGTGGAGCCTCCAATTGCAGTGGATTCC...GGGCAGCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp CTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGTGCAGAACTTGCGGTCGGTCGTCGAGGTCTTTaGTCTATCCCCGAGGAATCC +
Preference number: 4 (lower is better)
Translates to: LAKAQAGQVVGLGAELAVGRRGL*SIPEES
Trigger: GGATTCCTCGGGGATAGACCAAAGACCTCGACGACC...GACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp TTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGAGGTCGTCGAGGTCTTTaGTCTATCCCCGAGGAATCC +
Preference number: 4 (lower is better)
Translates to: FVCTFVWGLRGLVSRAVRGRRGL*SIPEES
Trigger: GGATTCCTCGGGGATAGACCAAAGACCTCGACGACC...TCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGGGTCGTCGAGGTCTTTaGTCTATCCCCGAGGAATCC +
Preference number: 4 (lower is better)
Translates to: KHCEGDPASHGRVSPEERGRRGL*SIPEES
Trigger: GGATTCCTCGGGGATAGACCAAAGACCTCGACGACC...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGTACGTCTGTGTCCTaGCGGCTCGAGCTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVCTSVS*RLELGP
Trigger: AGGACCCAGCTCGAGCCGCCAGGACACAGACGTACA...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTAAGGATGGCTCAGTGGTaGGGAGGCGCTCCCTCCCGA +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLRMAQW*GGAPSR
Trigger: TCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCT...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CATTGCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTCTGAGGATGGCTCAGTaGTGGGGAGGCGCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: HCCHHLQGQLLTRMEKKRLRMAQ*WGGAPS
Trigger: GGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAG...ACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCACTGAGGATGGCTCAGTaGTGGGGAGGCGCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPLRMAQ*WGGAPS
Trigger: GGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAG...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGCTGAGGATGGCTCAGTaGTGGGGAGGCGCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWLRMAQ*WGGAPS
Trigger: GGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAG...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGCCAGGAACGCTGAGCTaGGCTCAGACGGTCATCAGT +
Preference number: 4 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWPGTLS*AQTVIS
Trigger: ACTGATGACCGTCTGAGCCCAGCTCAGCGTTCCTGG...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CGGGGTGCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGCCAGGAACGCTGAGCTaGGCTCAGACGGTCATCAGT +
Preference number: 4 (lower is better)
Translates to: RGAAEGCPVLVLLTERIGPGTLS*AQTVIS
Trigger: ACTGATGACCGTCTGAGCCCAGCTCAGCGTTCCTGG...CCCAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTTCAGCTGCACCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGTCACTCCTTTCGCCATaGAGCTCAGGGCCGCATCAG +
Preference number: 4 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLSLLSP*SSGPHQ
Trigger: CTGATGCGGCCCTGAGCTCCATGGCGAAAGGAGTGA...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGTGCAGAACTTGCGGTCCACAGAGTGCTGAGATaGAAGCCACTCTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LAKAQAGQVVGLGAELAVHRVLR*KPLWVA
Trigger: TGCCACCCAGAGTGGCTTCCATCTCAGCACTCTGTG...GACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGCACAGAGTGCTGAGATaGAAGCCACTCTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: KHCEGDPASHGRVSPEERHRVLR*KPLWVA
Trigger: TGCCACCCAGAGTGGCTTCCATCTCAGCACTCTGTG...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGTCACAGCTGGGGGCGTaGTCAGCCCCAGTGGCGAGA +
Preference number: 4 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGSQLGA*SAPVAR
Trigger: TCTCGCCACTGGGGCTGACCACGCCCCCAGCTGTGA...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AATGATCACAATGGCAGTTTCGAGGAATCCAGGGTCAGTCCTCACACGGGCCTCACCCACGGTCACAGCTaGGGGCGTGGTCAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: NDHNGSFEESRVSPHTGLTHGHS*GRGQPQ
Trigger: CTGGGGCTGACCACGCCCCCAGCTGTGACCGTGGGT...GAGGCCCGTGTGAGGACTGACCCTGGATTCCTCGAAACTGCCATTGTGATCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATCCTCAGAACAAAGCTaGGCAGGGCCGAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVSSEQS*AGPRAS
Trigger: GCTGGCTCTCGGCCCTGCCCAGCTTTGTTCTGAGGA...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGTAGTCCTGGAAGATaGGCACTGCACACGCCGGGG +
Preference number: 4 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYGSPGR*ALHTPG
Trigger: CCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACC...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AACAGGGCCACCCCTTCCGTGCAAAGCCCTGCTGCAGCTCTGGACAGCCCCCAATGCATCTATCAGTTATaGGCTAGCTGGCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: NRATPSVQSPAAALDSPQCIYQL*ASWLAT
Trigger: GGTGGCCAGCCAGCTAGCCCATAACTGATAGATGCA...TTGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp CACAGGAGCAGCAAGCTTGCTCCTGACAGCATGGCTCTCACACAGCATCCTCCCTGGACACACACACCATaGGCAAGCAAGGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: HRSSKLAPDSMALTQHPPWTHTP*ASKARA
Trigger: GGCCCTGGCCTTGCTTGCCCATGGTGTGTGTGTCCA...GGGAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AAACCAGGAGATGGTCCTCTCGGAAAACTCCGCTCCTCTAGGATGAGCCCACTCGGGAGGAGCCTGGTCTaGCCGACTGCAGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: KPGDGPLGKLRSSRMSPLGRSLV*PTADSR
Trigger: CCTGCTGTCTGCAGTCGGCCAGACCAGGCTCCTCCC...GAGTGGGCTCATCCTAGAGGAGCGGAGTTTTCCGAGAGGACCATCTCCTGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAATGCCACAGGGAGTGTGCTaGGGAGGAGCCTGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: GQVAAAPNSRPALVKGKMPQGVC*GGAWSG
Trigger: GCCAGACCAGGCTCCTCCCCAGCACACTCCCTGTGG...CATTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AACAGGGCCACCCCTTCCGTGCAAAGCCCTGCTGCAGCTCTGGACAGCCCCCAACGGAGAAGCCATTTGTaGAGGTGGCACATTCACCTG +
Preference number: 4 (lower is better)
Translates to: NRATPSVQSPAAALDSPQRRSHL*RWHIHL
Trigger: CAGGTGAATGTGCCACCTCCACAAATGGCTTCTCCG...TTGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp AGCTGCCCGCCATCACCGCAGCGGAAGCACTCGTCCTCTGACTGCCTCTTCCCTCCACATAGAGAAAGGTaGACTTGGCTTTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: SCPPSPQRKHSSSDCLFPPHRER*TWLSAP
Trigger: AGGAGCGGAAAGCCAAGTTCACCTTTCTCTATGTGG...AGGGAAGAGGCAGTCAGAGGACGAGTGCTTCCGCTGCGGTGATGGCGGGCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp CTCCGCTCCTCTAGGATGAGCCCACTCCTGGCATCTGAAGTGGGACAATGCTGCTTCCCTATGTCGGGGTaGCTCTCCAGGGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LRSSRMSPLLASEVGQCCFPMSG*LSRVSA
Trigger: TGCAGAGACCCTGGAGAGTCACCCCGACATAGGGAA...GCAGCATTGTCCCACTTCAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GAAAGCCCAAGGCAGGCGAGGTGGAAAGCTCCGCAGCAGGGTCCTTCACAGAGCGCCTCTGCCGTCTTTTaGGGAGTACTCTTCCCTATG +
Preference number: 4 (lower is better)
Translates to: ESPRQARWKAPQQGPSQSASAVF*GVLFPM
Trigger: CATAGGGAAGAGTACTCCTCAAAAGACGGCAGAGGC...GCTCTGTGAAGGACCCTGCTGCGGAGCTTTCCACCTCGCCTGCCTTGGGCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR TCA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGGACTCCACTGTGACCTaGGCAGCTCTTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: KHCEGDPASHGRVSPEERDSTVT*AALQSP
Trigger: AGGAGATTGAAGAGCTGCTCAGGTCACAGTGGAGTC...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTATTGCTGCCTGGCTCTTaGGCGAGGAGGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLLLPGS*ARRLPP
Trigger: TGGAGGCAGCCTCCTCGCTCAAGAGCCAGGCAGCAA...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGGCTAAACCCAAGAGCTaGAGATGCTGCCGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLAKPKS*RCCRGS
Trigger: GCTTCCACGGCAGCATCTTCAGCTCTTGGGTTTAGC...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CGGAAGAAAGGCCGGCCTGAGGACGGACAGCTGGGTTCTCACTTCAGGTGCCTGGGTTCAAATCCAACTTaGCTGGTGTGGGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: RKKGRPEDGQLGSHFRCLGSNPT*LVWAPT
Trigger: TGTGGGAGCCCACACCAGTCAAGTTGGATTTGAACC...CAGGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR TCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTAAGCACCAGCTCACGTTaGCGTGGGCGTGGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLSTSSR*RGRGVA
Trigger: AGCGACACCACGCCCACGTCAACGTGAGCTGGTGCT...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp AACAAATTCTCCCTTTCTGATGTCCCTCTTGGCGACCAGGCCCCACCCTTTGCCAGCACCAGCTCACGTTaGCGTGGGCGTGGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: NKFSLSDVPLGDQAPPFASTSSR*RGRGVA
Trigger: AGCGACACCACGCCCACGTCAACGTGAGCTGGTGCT...GGCAAAGGGTGGGGCCTGGTCGCCAAGAGGGACATCAGAAAGGGAGAATTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGAAGCACTCGTCCTCTaGCTGCCTCTTCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYEALVL*LPLPFP
Trigger: GGGGAAGGGAAGAGGCAGTCAGAGGACGAGTGCTTC...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAGAAGCACTCGTCCTCTaGCTGCCTCTTCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: LRARKGATRRRVSSDPWEEALVL*LPLPFP
Trigger: GGGGAAGGGAAGAGGCAGTCAGAGGACGAGTGCTTC...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCAGAAGCACTCGTCCTCTaGCTGCCTCTTCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: CGDTARPVPRTTFQVRASEALVL*LPLPFP
Trigger: GGGGAAGGGAAGAGGCAGTCAGAGGACGAGTGCTTC...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGAGACGCAGAGGTGGCAAAATaGAGTCGAAGGTTTGCCACA +
Preference number: 4 (lower is better)
Translates to: VCTFVWGLRGLVSRAVRDAEVAK*SRRFAT
Trigger: TGTGGCAAACCTTCGACTTCATTTTGCCACCTCTGC...GTCTCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR TCA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAGAGTGGCGACGGCGCTaGGAGCCAGAAAGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: RWALHTPGFRCQDRQTLREWRRR*EPERGQ
Trigger: TTGCCCCCTTTCTGGCTCTCAGCGCCGTCGCCACTC...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGGCAGAGGTGGCAAAATGAAGGAGTGGCGACGGCGCTaGGAGCCAGAAAGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: SRPGAPYRTNWGRGGKMKEWRRR*EPERGQ
Trigger: TTGCCCCCTTTCTGGCTCTCAGCGCCGTCGCCACTC...CTTCATTTTGCCACCTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGACGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCGAAAAGAAGCGTTTCTaGGGAACAATTCACATTAGT +
Preference number: 4 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGEKKRF*GTIHIS
Trigger: ACTAATGTGAATTGTTCCTCAGAAACGCTTCTTTTC...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAGAAGATAGGCCCAGGTaGGAAGTAGGCCCAACCCGG +
Preference number: 4 (lower is better)
Translates to: LRARKGATRRRVSSDPWEEDRPR*EVGPTR
Trigger: CCGGGTTGGGCCTACTTCTCACCTGGGCCTATCTTC...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTAAGACCCACAGAGTGCTaGGATGGAAGCCACTCTGGG +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVRPTEC*DGSHSG
Trigger: CCCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCT...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACGAAGAAAGGCCGGCCTaGGGACGGACAGCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDEERPA*GRTAGF
Trigger: GAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTC...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGACTCAACAGGGTATGGTaGGGCTGTGACACCCCGTGG +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRLNRVW*GCDTPW
Trigger: CCACGGGGTGTCACAGCCTCACCATACCCTGTTGAG...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp AAACCAGGAGATGGTCCTCTCGGAAAACTCCGCTCCTCTAGGATGAGCCCACTCGCCATGCTGCGGCACTaGGCTCCGAGCAGCTTAGCT +
Preference number: 4 (lower is better)
Translates to: KPGDGPLGKLRSSRMSPLAMLRH*APSSLA
Trigger: AGCTAAGCTGCTCGGAGCTCAGTGCCGCAGCATGGC...GAGTGGGCTCATCCTAGAGGAGCGGAGTTTTCCGAGAGGACCATCTCCTGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp CCCTGCAGAAAATCCCACTCGGAGGAGTGGTCGCTGAGGATTCAGAGTGGCAAGGGTTGCCTAGGTCCCTaGCCTTCCTGCACTGGAAGG +
Preference number: 4 (lower is better)
Translates to: PCRKSHSEEWSLRIQSGKGCLGP*PSCTGR
Trigger: CCTTCCAGTGCAGGAAGGTCAGGGACCTAGGCAACC...CTTGCCACTCTGAATCCTCAGCGACCACTCCTCCGAGTGGGATTTTCTGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp GAGCCTAGGTCTGGAAGCAACAGGAATCAGGTGTGGTGTGTGAGTCGCCTTCCAGAGACTGAGCTCCCCTaGCTCATGGGCAGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: EPRSGSNRNQVWCVSRLPETELP*LMGRPR
Trigger: TCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTC...TGGAAGGCGACTCACACACCACACCTGATTCCTGTTGCTTCCAGACCTAGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp GGTTTGAGTCCCTGCAGAAAATCCCACTCGGAGGAGTGGTCGCTGAGGATTCAGGAGACTGAGCTCCCCTaGCTCATGGGCAGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: GLSPCRKSHSEEWSLRIQETELP*LMGRPR
Trigger: TCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTC...CTGAATCCTCAGCGACCACTCCTCCGAGTGGGATTTTCTGCAGGGACTCAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGAGCAGCAATAGGGGGCTaGTGGTGTCTGCAACCCGCA +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRAAIGG*WCLQPA
Trigger: TGCGGGTTGCAGACACCAGCAGCCCCCTATTGCTGC...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
CDS-3UTR GCA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCAGGAGGACACCTGACGTaGAGCAATAGGGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CGDTARPVPRTTFQVRASGGHLT*SNRGLL
Trigger: CAGCAGCCCCCTATTGCTGCACGTCAGGTGTCCTCC...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
CDS-3UTR GCA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACCGCGCAACAGGGCTATaGGGCCCGAGATGTCCACAG +
Preference number: 4 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDRATGL*GPRCPQ
Trigger: CTGTGGACATCTCGGGCCGCATAGCCCTGTTGCGCG...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
CDS-3UTR GCA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCCCTGCTTCATCTTTATaGACTTTACAACACTCTGAA +
Preference number: 4 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGPASSL*TLQHSE
Trigger: TTCAGAGTGTTGTAAAGTGCATAAAGATGAAGCAGG...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGAGGATTTCTGGTGCCTaGTTCATCTTTATGCACTTT +
Preference number: 4 (lower is better)
Translates to: LAARAGSSGPVHARPLPQRISGA*FIFMHF
Trigger: AAAGTGCATAAAGATGAAGCAGGCACCAGAAATCCT...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTGGCCGTTAAACTTCTaGATGACCCCCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTWPLNF*MTPSCR
Trigger: CCTGCAGGAGGGGGTCATGCAGAAGTTTAACGGCCA...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGTTTGGCATCGTGTaGGCCGGGTTCTCCATTAAA +
Preference number: 4 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDQFGIV*AGFSIK
Trigger: TTTAATGGAGAACCCGGCGCACACGATGCCAAACTG...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GCCCCGCCCAGGTTGCCTAGGTCCCTGACCTTCCTGCACTGGAAGGCCTACACTCAGTTTGGCATCGTGTaGGCCGGGTTCTCCATTAAA +
Preference number: 4 (lower is better)
Translates to: APPRLPRSLTFLHWKAYTQFGIV*AGFSIK
Trigger: TTTAATGGAGAACCCGGCGCACACGATGCCAAACTG...AGTGTAGGCCTTCCAGTGCAGGAAGGTCAGGGACCTAGGCAACCTGGGCGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGGCTTCGACAAGGCCCTaGTCCAGCAAGGAGTCATAT +
Preference number: 4 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWASTRP*SSKESY
Trigger: ATATGACTCCTTGCTGGAGCAGGGCCTTGTCGAAGC...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGTACGTGATACTGGCGTaGACTCTTTTTCTGACCTTT +
Preference number: 4 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAEYVILA*TLFLTF
Trigger: AAAGGTCAGAAAAAGAGTGCACGCCAGTATCACGTA...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGCTCCTCCACTGACATaGTTGCAGCTTCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPAPPLT*LQLLLL
Trigger: AAGCAGAAGAAGCTGCAAGCATGTCAGTGGAGGAGC...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAAGCTCCTCCACTGACATaGTTGCAGCTTCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEAPPLT*LQLLLL
Trigger: AAGCAGAAGAAGCTGCAAGCATGTCAGTGGAGGAGC...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GAAAGCCCAAGGCAGGCGAGGTGGAAAGCTCCGCAGCAGGGTCCTTCACAGAGCACTCTCCAGGGTCTCTaGAGAGCTACACAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: ESPRQARWKAPQQGPSQSTLQGL*RATQFG
Trigger: GCCAAACTGTGTAGCTCTGCAGAGACCCTGGAGAGT...GCTCTGTGAAGGACCCTGCTGCGGAGCTTTCCACCTCGCCTGCCTTGGGCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGGACCAAAAACTGGGATaGTGCATCTCCCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKDQKLG*CISLPA
Trigger: AGCAGGAAGGGAGATGCAGCATCCCAGTTTTTGGTC...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGAGACCTTGGTGTTGTAGCGTaGTCTCTGCTTCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: VCTFVWGLRGLVSRAVRDLGVVA*SLLLTQ
Trigger: CTGAGTGAGAAGCAGAGAGCACGCTACAACACCAAG...GTCTCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR GCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTCTTGGTGTTGTAGCGTaGTCTCTGCTTCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPLGVVA*SLLLTQ
Trigger: CTGAGTGAGAAGCAGAGAGCACGCTACAACACCAAG...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGAGACCTCTTGGTGTTGTAGCGTaGTCTCTGCTTCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: LHFRMGTPRARLPGCPRPLGVVA*SLLLTQ
Trigger: CTGAGTGAGAAGCAGAGAGCACGCTACAACACCAAG...AGGTCTCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR GCA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGCTTGGTGTTGTAGCGTaGTCTCTGCTTCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGLGVVA*SLLLTQ
Trigger: CTGAGTGAGAAGCAGAGAGCACGCTACAACACCAAG...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GCCCCGCCCAGGTTGCCTAGGTCCCTGACCTTCCTGCACTGGAAGGCCTACACTCTCTTCCGAAGACTGTaGTTGTCCGTCCTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: APPRLPRSLTFLHWKAYTLFRRL*LSVLSL
Trigger: AAGACTCAGGACGGACAAGCACAGTCTTCGGAAGAG...AGTGTAGGCCTTCCAGTGCAGGAAGGTCAGGGACCTAGGCAACCTGGGCGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTCTCTTCCGAAGACTGTaGTTGTCCGTCCTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPLFRRL*LSVLSL
Trigger: AAGACTCAGGACGGACAAGCACAGTCTTCGGAAGAG...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACAGTTTGTGTTTCGTCTaGACTTTCGTATGGGGACTC +
Preference number: 4 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYSLCFV*TFVWGL
Trigger: GAGTCCCCATACGAAAGTGCAGACGAAACACAAACT...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GTAGGACCGCCCGTCCGGGGTGCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTAGTTTGTGTTTCGTCTaGACTTTCGTATGGGGACTC +
Preference number: 4 (lower is better)
Translates to: VGPPVRGAAEGCPVLVLLSLCFV*TFVWGL
Trigger: GAGTCCCCATACGAAAGTGCAGACGAAACACAAACT...AAGGAGCACCAGGACGGGACAGCCTTCAGCTGCACCCCGGACGGGCGGTCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGACACAGAGCAGGAGGCTaGCCGGCTTCTCACACAGCT +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRHRAGG*PASHTA
Trigger: AGCTGTGTGAGAAGCCGGGCAGCCTCCTGCTCTGTG...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CGGAAGAAAGGCCGGCCTGAGGACGGACAGCTGGGTTCTCACTTCAGGTGCCTGGGGATGGCAAACTTCTaGCGGCCACCATCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: RKKGRPEDGQLGSHFRCLGMANF*RPPSVV
Trigger: AACTACAGATGGTGGCCGGCAGAAGTTTGCCATCCC...CAGGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCCCACGTTCAGCTTCTTGCAGTaGGTTTTTGAAGACTCTTCC +
Preference number: 4 (lower is better)
Translates to: QCSGRRGTLQGHTPLNPTFSFLQ*VFEDSS
Trigger: GGAAGAGTCTTCAAAAACGCACTGCAAGAAGCTGAA...CGTGGGGTTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACTTATTCACCTTGATGTaGTTGTATGGTGGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYLFTLM*LYGGGL
Trigger: CAAGCCCCCACCATACAAGCACATCAAGGTGAATAA...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CATTGCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTCCCGCGGGACACACCTaGGGGTGGCACTCAAACATC +
Preference number: 4 (lower is better)
Translates to: HCCHHLQGQLLTRMEKKRPAGHT*GWHSNI
Trigger: GATGTTTGAGTGCCACCCGCAGGTGTGTCCCGCGGG...ACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTCCTTGGTGCAGAACTTaGGGTCACACAGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTPWCRT*GHTAPA
Trigger: AGCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGG...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTGGTGGTAGGCCTTGGTaGAGAACTTGCGGTCACACA +
Preference number: 4 (lower is better)
Translates to: GHVGKGTHGAPFSGCSRLGGRPW*RTCGHT
Trigger: TGTGTGACCGCAAGTTCTGCACCAAGGCCTACCACC...AAGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGGCTGTCCCGTCCTGGTaGTCCTTACAGAACGAATTG +
Preference number: 4 (lower is better)
Translates to: KHCEGDPASHGRVSPEERAVPSW*SLQNEL
Trigger: CAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGC...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CGGAAGAAAGGCCGGCCTGAGGACGGACAGCTGGGTTCTCACTTCAGGTGCCTGGCTGTCCCGTCCTGGTaGTCCTTACAGAACGAATTG +
Preference number: 4 (lower is better)
Translates to: RKKGRPEDGQLGSHFRCLAVPSW*SLQNEL
Trigger: CAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGC...CAGGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp ACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCTCCGGGCCAGTTCATaGTCGCCCTCTCCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: TSVCVSSALSYGDSEGSSLRASS*SPSPAG
Trigger: GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAG...AGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAAGTGATCAGCAGAGACTaGATCTTCCATCACCAGACC +
Preference number: 4 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEVISRD*IFHHQT
Trigger: GGTCTGGTGATGGAAGATGCAGTCTCTGCTGATCAC...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGGCCCCCTTCTCAGGGTaGTCCAGACTTCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWAPFSG*SRLPRV
Trigger: GACCCTGGGAAGTCTGGAGCACCCTGAGAAGGGGGC...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTCTGCAAAGCCGATTCTaGTGTTTTGACGTAAGCATT +
Preference number: 4 (lower is better)
Translates to: TYEARTPARQASTPRTAPLQSRF*CFDVSI
Trigger: AATGCTTACGTCAAAACAGCAGAATCGGCTTTGCAG...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGATCTGCTCCCCAAAGTaGACTGCAAAGCCGATTCTG +
Preference number: 4 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGICSPK*TAKPIL
Trigger: CAGAATCGGCTTTGCAGTGCACTTTGGGGAGCAGAT...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCGACCACATTTTAAGCTaGCCATTCGGACACATCCCC +
Preference number: 4 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPDHILS*PFGHIP
Trigger: GGGGATGTGTCCGAATGGGCAGCTTAAAATGTGGTC...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CACAGGAGCAGCAAGCTTGCTCCTGACAGCATGGCTCTCACACAGCATCCTCCCGAGTTCACTTGCCCCTaGCCACCTTCCCAATGTCCC +
Preference number: 4 (lower is better)
Translates to: HRSSKLAPDSMALTQHPPEFTCP*PPSQCP
Trigger: GGGACATTGGGAAGGTGGGCAGGGGCAAGTGAACTC...GGGAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GGTGACTCTCCAGGGTCTCTGCAGAGCTACACAGTTTGGCCCTCCGCCTTCTCTCTTTACAGCCCTCCATaGACGTCTCAGGCCCAGACG +
Preference number: 4 (lower is better)
Translates to: GDSPGSLQSYTVWPSAFSLYSPP*TSQAQT
Trigger: CGTCTGGGCCTGAGACGTGCATGGAGGGCTGTAAAG...AGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTGCAGAGACCCTGGAGAGTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR GCA 90 bp GGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAATGCCACCACAGCCATGCTaGGGCACTGAGCTCCGAGCA +
Preference number: 4 (lower is better)
Translates to: GQVAAAPNSRPALVKGKMPPQPC*GTELRA
Trigger: TGCTCGGAGCTCAGTGCCGCAGCATGGCTGTGGTGG...CATTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GCCCCGCCCAGGTTGCCTAGGTCCCTGACCTTCCTGCACTGGAAGGCCTACACTGCTCAACTGACACTGTaGCCTTTCAGAACCAACGCA +
Preference number: 4 (lower is better)
Translates to: APPRLPRSLTFLHWKAYTAQLTL*PFRTNA
Trigger: TGCGTTGGTTCTGAAAGGGCACAGTGTCAGTTGAGC...AGTGTAGGCCTTCCAGTGCAGGAAGGTCAGGGACCTAGGCAACCTGGGCGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp GGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTTCCACAGTACTGAGGTaGAGGACACCTGACGTGCAG +
Preference number: 4 (lower is better)
Translates to: GHVGKGTHGAPFSGCSRLSTVLR*RTPDVQ
Trigger: CTGCACGTCAGGTGTCCTCCACCTCAGTACTGTGGA...AAGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
CDS-3UTR CCA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACACTGCCGAGGATTTCTaGTGCCTGCTTCATCTTTAT +
Preference number: 4 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYTAEDF*CLLHLY
Trigger: ATAAAGATGAAGCAGGCACCAGAAATCCTCGGCAGT...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGAAGGGCAGGGCGTCGTaGCCGTTAAACTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLKGRAS*PLNFCM
Trigger: CATGCAGAAGTTTAACGGCCACGACGCCCTGCCCTT...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CGGAAGAAAGGCCGGCCTGAGGACGGACAGCTGGGTTCTCACTTCAGGTGCCTGTTTCAGCTTGTCGGCTaGAATAAAGGGCAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: RKKGRPEDGQLGSHFRCLFQLVG*NKGQGV
Trigger: GACGCCCTGCCCTTTATTCCAGCCGACAAGCTGAAA...CAGGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGACTCAAAACGCAGTTTaGCATCGTGTGCGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: KHCEGDPASHGRVSPEERTQNAV*HRVRRV
Trigger: AACCCGGCGCACACGATGCCAAACTGCGTTTTGAGT...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGACTCAAAACGCAGTTTaGCATCGTGTGCGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWTQNAV*HRVRRV
Trigger: AACCCGGCGCACACGATGCCAAACTGCGTTTTGAGT...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp CTCCGCTCCTCTAGGATGAGCCCACTCCTGGCATCTGAAGTGGGACAATGCTGCACCCTACTCCTCTTCTaGGGTCAGCCTCTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: LRSSRMSPLLASEVGQCCTLLLF*GQPLPS
Trigger: AGACGGCAGAGGCTGACCCCAGAAGAGGAGTAGGGT...GCAGCATTGTCCCACTTCAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGTCCCTTCCTGCTTCGTaGCATGGAGACTGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWSLPAS*HGDCGL
Trigger: AAGACCACAGTCTCCATGCCACGAAGCAGGAAGGGA...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp CCAGGGAGACTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGCAGAAGACCAAAAACTaGGATGCTGCATCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: PGRLSSPDSWAGLDPATLQKTKN*DAASPF
Trigger: GAAGGGAGATGCAGCATCCCAGTTTTTGGTCTTCTG...CAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp CGGAAGAAAGGCCGGCCTGAGGACGGACAGCTGGGTTCTCACTTCAGGTGCCTGTTTTTCGTTGCTGCCTaGCTCTTGAGCGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: RKKGRPEDGQLGSHFRCLFFVAA*LLSEEA
Trigger: AGCCTCCTCGCTCAAGAGCCAGGCAGCAACGAAAAA...CAGGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AAGCACCAGCTCACGTTGACGTGGGCGTGGTGTCGCTTCCCCTTCCGAGCAGTGCTGAAGATGCTGCCGTaGAAGCCCGATTTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: KHQLTLTWAWCRFPFRAVLKMLP*KPDFAS
Trigger: AGAAGCGAAATCGGGCTTCCACGGCAGCATCTTCAG...CACTGCTCGGAAGGGGAAGCGACACCACGCCCACGTCAACGTGAGCTGGTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAGGTGAACCTCCCTTCTaGCCTCCGGGAAAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: LRARKGATRRRVSSDPWEGEPPF*PPGKPK
Trigger: CTTGGGCTTTCCCGGAGGCCAGAAGGGAGGTTCACC...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACCAGCTCACGTTGACGTaGGCGTGGTGTCGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDQLTLT*AWCRFP
Trigger: GGGGAAGCGACACCACGCCCACGTCAACGTGAGCTG...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGAGGGTGGAAGGCCGCTaGGCAGGACTCACAGCACAG +
Preference number: 4 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGRVEGR*AGLTAQ
Trigger: CTGTGCTGTGAGTCCTGCCCAGCGGCCTTCCACCCT...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AACAAATTCTCCCTTTCTGATGTCCCTCTTGGCGACCAGGCCCCACCCTTTGCCTTCAGGCAGTCAGGGTaGAAGGCCGCTGGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: NKFSLSDVPLGDQAPPFAFRQSG*KAAGQD
Trigger: GTCCTGCCCAGCGGCCTTCCACCCTGACTGCCTGAA...GGCAAAGGGTGGGGCCTGGTCGCCAAGAGGGACATCAGAAAGGGAGAATTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp GCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTACCCAAATGATATCCTaGAAGTGCAGCTTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: AEDGSVVGRRSLPRRPVRTQMIS*KCSFFP
Trigger: TGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGT...ACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CGGGGTGCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGCTTGATGTGCTTGTATaGTGGGGGCTTGCGCTCGCT +
Preference number: 4 (lower is better)
Translates to: RGAAEGCPVLVLLTERIGLDVLV*WGLALA
Trigger: AGCGAGCGCAAGCCCCCACCATACAAGCACATCAAG...CCCAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTTCAGCTGCACCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGCTTGATGTGCTTGTATaGTGGGGGCTTGCGCTCGCT +
Preference number: 4 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWLDVLV*WGLALA
Trigger: AGCGAGCGCAAGCCCCCACCATACAAGCACATCAAG...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGAGTGAAGCACTGGTTCTaGCAGAACTCGCCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRVKHWF*QNSPAG
Trigger: TCCCGCGGGCGAGTTCTGCCAGAACCAGTGCTTCAC...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGATGATCTTGGTCTCTaGGTACTGGCGCTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPDDLGL*VLALGE
Trigger: TTCACCAAGCGCCAGTACCCAGAGACCAAGATCATC...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TGTGCTTGTATGGTGGGGGCTTGCGCTCGCTCTCCTGTGTTTCTCGGGCTTCCCGGAATCCACTGCAATTaGAGGCTCCACACCGGCAGA +
Preference number: 4 (lower is better)
Translates to: CACMVGACARSPVFLGLPGIHCN*RLHTGR
Trigger: TCTGCCGGTGTGGAGCCTCCAATTGCAGTGGATTCC...GGGAAGCCCGAGAAACACAGGAGAGCGAGCGCAAGCCCCCACCATACAAGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGACAGGTGGTAGGCCTTaGTGCAGAACTTGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLTGGRP*CRTCGH
Trigger: GTGACCGCAAGTTCTGCACCAAGGCCTACCACCTGT...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGACAGGTGGTAGGCCTTaGTGCAGAACTTGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWTGGRP*CRTCGH
Trigger: GTGACCGCAAGTTCTGCACCAAGGCCTACCACCTGT...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGAAGGCTGTCCCGTCCTaGTGCTCCTTACAGAACGAA +
Preference number: 4 (lower is better)
Translates to: KHCEGDPASHGRVSPEERKAVPS*CSLQNE
Trigger: TTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTT...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCGGCCAAGCGGCCGCCTaGCGCTATTTGCCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLGQAAA*RYLPSV
Trigger: CACAGAGGGCAAATAGCGCCAGGCGGCCGCTTGGCC...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGCCTGGCGGCTCGAGCTaGGTCCTCCGGGCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: NKVVLEDGHCTRRGLDVKPGGSS*VLRASS
Trigger: TGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAGG...CTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCCCAGGAACGCTGAGCTaGGCTCAGACGGTCATCAGT +
Preference number: 4 (lower is better)
Translates to: FVFRLHFRMGTPRARLPGPGTLS*AQTVIS
Trigger: ACTGATGACCGTCTGAGCCCAGCTCAGCGTTCCTGG...GCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGAGCTTCTCACTAGGATaGAAAAGAAGCGTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAESFSLG*KRSVSE
Trigger: CTCAGAAACGCTTCTTTTCCATCCTAGTGAGAAGCT...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATCACTCCTTTCGCCATaGAGCTCAGGGCCGCATCAG +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVSLLSP*SSGPHQ
Trigger: CTGATGCGGCCCTGAGCTCCATGGCGAAAGGAGTGA...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGCACAGAGTGCTGAGATaGAAGCCACTCTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWHRVLR*KPLWVA
Trigger: TGCCACCCAGAGTGGCTTCCATCTCAGCACTCTGTG...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGTGCAGAACTTGCGGTCAGTGGGTGTCATACCTaGCCTAGACCAGTGCCCATA +
Preference number: 4 (lower is better)
Translates to: LAKAQAGQVVGLGAELAVSGCHT*PRPVPI
Trigger: TATGGGCACTGGTCTAGGCCAGGTATGACACCCACT...GACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGAGTGGGTGTCATACCTaGCCTAGACCAGTGCCCATA +
Preference number: 4 (lower is better)
Translates to: KHCEGDPASHGRVSPEERSGCHT*PRPVPI
Trigger: TATGGGCACTGGTCTAGGCCAGGTATGACACCCACT...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGGCAAAGGCACACATaGTGCCCCCTTCTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYGQRHT*CPLLRV
Trigger: CACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCC...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCACAGCTCGTTTCCCCTaGGTCCTCTGTGTAGTTAAC +
Preference number: 4 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPTARFP*VLCVVN
Trigger: GTTAACTACACAGAGGACCCAGGGGAAACGAGCTGT...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGACGTGGTCAGCCCCAGTaGCGAGAAACCCTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRRGQPQ*RETLQA
Trigger: AGCTTGCAGGGTTTCTCGCCACTGGGGCTGACCACG...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TGGTGTCGCTTCCCCTTCCGAGCAGTGAAGTGGGCAGTGCAGATGATGCTGTTGTCCTCAGAACAAAGCTaGGCAGGGCCGAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: WCRFPFRAVKWAVQMMLLSSEQS*AGPRAS
Trigger: GCTGGCTCTCGGCCCTGCCCAGCTTTGTTCTGAGGA...CAACAGCATCATCTGCACTGCCCACTTCACTGCTCGGAAGGGGAAGCGACACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp ACTTCCCGAAGGGCCGCTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGGGAATCCTGAGGGATTaGGGCGGTTTTTGTGTTTTG +
Preference number: 4 (lower is better)
Translates to: TSRRAACQGPGRTGGRPWGILRD*GGFCVL
Trigger: CAAAACACAAAAACCGCCCCAATCCCTCAGGATTCC...CCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACGGACACATCCCCCTGTaGGCGCACACGGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDGHIPL*AHTGGY
Trigger: ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCC...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CATTGCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTGGTAGTCCTGGAAGATaGGCACTGCACACGCCGGGG +
Preference number: 4 (lower is better)
Translates to: HCCHHLQGQLLTRMEKKRGSPGR*ALHTPG
Trigger: CCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACC...ACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGGGCTGTGACACCCCGTaGACACAGCATTTTACTCTA +
Preference number: 4 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGGCDTP*TQHFTL
Trigger: TAGAGTAAAATGCTGTGTCCACGGGGTGTCACAGCC...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGCTATTTTCCCCCAACTaGCAAGTCTCAACTCTCTAT +
Preference number: 4 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAELFSPN*QVSTLY
Trigger: ATAGAGAGTTGAGACTTGCCAGTTGGGGGAAAATAG...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CTCCGCTCCTCTAGGATGAGCCCACTCCTGGCATCTGAAGTGGGACAATGCTGCAAAAATGCGGACACCTaGGGCAGGACACCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LRSSRMSPLLASEVGQCCKNADT*GRTPGC
Trigger: GCAGCCTGGTGTCCTGCCCCAGGTGTCCGCATTTTT...GCAGCATTGTCCCACTTCAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AAACCAGGAGATGGTCCTCTCGGAAAACTCCGCTCCTCTAGGATGAGCCCACTCTGCTGGGGAGGAGCCTaGTCTGGCCGACTGCAGACA +
Preference number: 4 (lower is better)
Translates to: KPGDGPLGKLRSSRMSPLCWGGA*SGRLQT
Trigger: TGTCTGCAGTCGGCCAGACCAGGCTCCTCCCCAGCA...GAGTGGGCTCATCCTAGAGGAGCGGAGTTTTCCGAGAGGACCATCTCCTGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GTCTGGAAGCAACAGGAATCAGGTGTGGTGTGTGAGTCGCCTTCCACCCCACCCACACCCCATCCTTCCTaGGGACCATGGCAGAGACCT +
Preference number: 4 (lower is better)
Translates to: VWKQQESGVVCESPSTPPTPHPS*GPWQRP
Trigger: AGGTCTCTGCCATGGTCCCCAGGAAGGATGGGGTGT...GGGTGGGGTGGAAGGCGACTCACACACCACACCTGATTCCTGTTGCTTCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp CCAGGGAGACTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGCACTCCTCTAATGAGTaGAAACAACTGAGGCACACC +
Preference number: 4 (lower is better)
Translates to: PGRLSSPDSWAGLDPATLHSSNE*KQLRHT
Trigger: GGTGTGCCTCAGTTGTTTCCACTCATTAGAGGAGTG...CAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGTCTTTTTCTGACCTCTaGGGAGGAGAGAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKSFSDL*GGERKA
Trigger: TGCCTTCCTCTCTCCTCCCCAGAGGTCAGAAAAAGA...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR TCA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCCATTTTCTTCTGACTaGGACACATCAGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDPFSSD*DTSAAL
Trigger: CAGTGCTGCTGATGTGTCTCAGTCAGAAGAAAATGG...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGCCAAAGAACTGTACGTaGTACTGGCGTGCACTCTTT +
Preference number: 4 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGPKNCT*YWRALF
Trigger: AAAGAGTGCACGCCAGTATCACGTACAGTTCTTTGG...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CGGAAGAAAGGCCGGCCTGAGGACGGACAGCTGGGTTCTCACTTCAGGTGCCTGCCACATAGAGAAAGGTaGACTTGGCTTTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: RKKGRPEDGQLGSHFRCLPHRER*TWLSAP
Trigger: AGGAGCGGAAAGCCAAGTTCACCTTTCTCTATGTGG...CAGGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGTTCTTCACTGACTCCTaGGGATTCTGCCATTTCTCC +
Preference number: 4 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKFFTDS*GFCHFS
Trigger: GGAGAAATGGCAGAATCCTCAGGAGTCAGTGAAGAA...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGTTCTTCACTGACTCCTaGGGATTCTGCCATTTCTCC +
Preference number: 4 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGFFTDS*GFCHFS
Trigger: GGAGAAATGGCAGAATCCTCAGGAGTCAGTGAAGAA...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGTTCCCTATGTCGGGGTaGCTCTCCAGGGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: QFVFRLHFRMGTPRARLPFPMSG*LSRVSA
Trigger: TGCAGAGACCCTGGAGAGTCACCCCGACATAGGGAA...CGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR TCA 90 bp AACTGTAAAGCAGCCCCAGTCCCACCATCCGTGAACAGGTCTCGACCACCACTGTTCCCTATGTCGGGGTaGCTCTCCAGGGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: NCKAAPVPPSVNRSRPPLFPMSG*LSRVSA
Trigger: TGCAGAGACCCTGGAGAGTCACCCCGACATAGGGAA...CAGTGGTGGTCGAGACCTGTTCACGGATGGTGGGACTGGGGCTGCTTTACAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGTTCAATCTCCTCACCTaGAGCATCTGGGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWFNLLT*SIWVLS
Trigger: GCTGAGCACCCAGATGCTTCAGGTGAGGAGATTGAA...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGCAGCAGACTCCACTGTaGCCTGAGCAGCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWQQTPL*PEQLFN
Trigger: ATTGAAGAGCTGCTCAGGTCACAGTGGAGTCTGCTG...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGAGACCTTGGCCGTTTTGTCAGTaGTTGTGTCTCTCTTCCGAA +
Preference number: 4 (lower is better)
Translates to: LHFRMGTPRARLPGCPRPWPFCQ*LCLSSE
Trigger: TTCGGAAGAGAGACACAATCACTGACAAAACGGCCA...AGGTCTCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR TCA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGTGGCCGTTTTGTCAGTaGTTGTGTCTCTCTTCCGAA +
Preference number: 4 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKWPFCQ*LCLSSE
Trigger: TTCGGAAGAGAGACACAATCACTGACAAAACGGCCA...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp CTCCGCTCCTCTAGGATGAGCCCACTCCTGGCATCTGAAGTGGGACAATGCTGCGCTAAACCCAAGAGCTaGAGATGCTGCCGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: LRSSRMSPLLASEVGQCCAKPKS*RCCRGS
Trigger: GCTTCCACGGCAGCATCTTCAGCTCTTGGGTTTAGC...GCAGCATTGTCCCACTTCAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp AGCAGCCCCAGTCCCACCATCCGTGAACAGGTCTCGACCACCACTGAGTTGGTTGCTAAACCCAAGAGCTaGAGATGCTGCCGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: SSPSPTIREQVSTTTELVAKPKS*RCCRGS
Trigger: GCTTCCACGGCAGCATCTTCAGCTCTTGGGTTTAGC...AACCAACTCAGTGGTGGTCGAGACCTGTTCACGGATGGTGGGACTGGGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCAACTGAGTGTGTACGATaGTACGCCACCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPTECVR*YATCSS
Trigger: GCTGCTGCAGGTGGCGTATCATCGTACACACTCAGT...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCAGCACCAGCTCACGTTaGCGTGGGCGTGGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLSTSSR*RGRGVA
Trigger: AGCGACACCACGCCCACGTCAACGTGAGCTGGTGCT...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp AATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGCTCTTCCGATCCCTCTaGCCCCCTGGTAGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: NKVVLEDGHCTRRGLDVKLFRSL*PPGSGC
Trigger: GCAGCCGCTACCAGGGGGTCAGAGGGATCGGAAGAG...CTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATAAGGCTTATTCACCTTaGTGTGCTTGTATGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDKAYSP*CACMVG
Trigger: CCCCACCATACAAGCACATCAAGGTGAATAAGCCTT...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGGCATGTAGAAGTGGGTaGTGTCGTTCTCGTGTGCGT +
Preference number: 4 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWACRSG*CRSRVR
Trigger: ACGCACACGAGAACGACATCACCCACTTCTACATGC...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCAGAAGCACTCGTCCTCTaGCTGCCTCTTCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPEALVL*LPLPFP
Trigger: GGGGAAGGGAAGAGGCAGTCAGAGGACGAGTGCTTC...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGCCACACACGTCACAATaGTGCCAAGGACATTCCCAC +
Preference number: 4 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLPHTSQ*CQGHSH
Trigger: GTGGGAATGTCCTTGGCATCATTGTGACGTGTGTGG...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGGCAGAGGTGGCAAAATGAAGGCTATTTGCCCTCTGTaGCTCTCCGCCAGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SRPGAPYRTNWGRGGKMKAICPL*LSASPS
Trigger: GGAGGGGCTGGCGGAGAGTCACAGAGGGCAAATAGC...CTTCATTTTGCCACCTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGACGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGATTTGTCCAGGAACGCTaGGCTGGGCTCAGACGGTCA +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRFVQER*AGLRRS
Trigger: TGACCGTCTGAGCCCAGCTCAGCGTTCCTGGACAAA...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GACGCAGCGGACGCTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGGAAAAGAAGCGTTTCTaGGGAACAATTCACATTAGT +
Preference number: 4 (lower is better)
Translates to: DAADAAEDGSVVGRRSLPEKKRF*GTIHIS
Trigger: ACTAATGTGAATTGTTCCTCAGAAACGCTTCTTTTC...CGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CTTCTTCCCAGCCCTGCAGTCATTGCAGAACCAGCTGCCGTCAGGCATCTCGATAGACCCACAGAGTGCTaGGATGGAAGCCACTCTGGG +
Preference number: 4 (lower is better)
Translates to: LLPSPAVIAEPAAVRHLDRPTEC*DGSHSG
Trigger: CCCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCT...ATCGAGATGCCTGACGGCAGCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCAAGACCCACAGAGTGCTaGGATGGAAGCCACTCTGGG +
Preference number: 4 (lower is better)
Translates to: CGDTARPVPRTTFQVRASRPTEC*DGSHSG
Trigger: CCCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCT...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGAAAAGCACCTGCTGCTaGATGTTCTCTCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWKSTCC*MFSPSL
Trigger: GAGGGAGGGAGAGAACATTCAGCAGCAGGTGCTTTT...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTAAAAGCACCTGCTGCTaGATGTTCTCTCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: GHVGKGTHGAPFSGCSRLKSTCC*MFSPSL
Trigger: GAGGGAGGGAGAGAACATTCAGCAGCAGGTGCTTTT...AAGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCAGGGCCACACACCCCTaGACCCCACGCTTACAGGTC +
Preference number: 4 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLRATHP*TPRLQV
Trigger: GACCTGTAAGCGTGGGGTTCAGGGGTGTGTGGCCCT...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAAGGAGAAGTTAGAGTCTaGACTGGAAAGCACTACTCC +
Preference number: 4 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEGEVRV*TGKHYS
Trigger: GGAGTAGTGCTTTCCAGTTCAGACTCTAACTTCTCC...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CATTGCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTCTCAACAGGGTATGGTaGGGCTGTGACACCCCGTGG +
Preference number: 4 (lower is better)
Translates to: HCCHHLQGQLLTRMEKKRLNRVW*GCDTPW
Trigger: CCACGGGGTGTCACAGCCTCACCATACCCTGTTGAG...ACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGCTCAACAGGGTATGGTaGGGCTGTGACACCCCGTGG +
Preference number: 4 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGLNRVW*GCDTPW
Trigger: CCACGGGGTGTCACAGCCTCACCATACCCTGTTGAG...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGTTTGTATTTAATTTCTaGCGGGGCATTTCACACCTC +
Preference number: 4 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAEFVFNF*RGISHL
Trigger: GAGGTGTGAAATGCCCCGTCAGAAATTAAATACAAA...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGCACCTATGCGCTGGCTaGCTTCTAATGCATCTATCA +
Preference number: 4 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKHLCAG*LLMHLS
Trigger: TGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTG...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCAGAAAAGTGCAGGGACTaGGCGGACACAGACTCTGTC +
Preference number: 4 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPEKCRD*ADTDSV
Trigger: GACAGAGTCTGTGTCCGCTCAGTCCCTGCACTTTTC...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAATGCCTCCACGCACCAGGTaGCGTGACTCACTCGGAGAA +
Preference number: 4 (lower is better)
Translates to: GQVAAAPNSRPALVKGKMPPRTR*RDSLGE
Trigger: TTCTCCGAGTGAGTCACGTCACCTGGTGCGTGGAGG...CATTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp AGGTTGCCTAGGTCCCTGACCTTCCTGCACTGGAAGGCCTACACTCCTCTAATGATCAGGTGTGGTGTGTaGGTCGCCTTCCACCCCACC +
Preference number: 4 (lower is better)
Translates to: RLPRSLTFLHWKAYTPLMIRCGV*VAFHPT
Trigger: GGTGGGGTGGAAGGCGACTCACACACCACACCTGAT...CATTAGAGGAGTGTAGGCCTTCCAGTGCAGGAAGGTCAGGGACCTAGGCAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp GATATCCTGGAAGTGCAGCTTCTTCCCAGCCCTGCAGTCATTGCAGAACCAGCTCGCGCAACAGGGCTATaGGGCCCGAGATGTCCACAG +
Preference number: 4 (lower is better)
Translates to: DILEVQLLPSPAVIAEPARATGL*GPRCPQ
Trigger: CTGTGGACATCTCGGGCCGCATAGCCCTGTTGCGCG...AGCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAGCTGCACTTCCAGGATATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp TCTCGACCACCACTGAGTTGGTTTGAGTCCCTGCAGAAAATCCCACTCGGAGGACGCGCAACAGGGCTATaGGGCCCGAGATGTCCACAG +
Preference number: 4 (lower is better)
Translates to: SRPPLSWFESLQKIPLGGRATGL*GPRCPQ
Trigger: CTGTGGACATCTCGGGCCGCATAGCCCTGTTGCGCG...TCCTCCGAGTGGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420906.6
CDS-3UTR GCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCCGCGCAACAGGGCTATaGGGCCCGAGATGTCCACAG +
Preference number: 4 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSRATGL*GPRCPQ
Trigger: CTGTGGACATCTCGGGCCGCATAGCCCTGTTGCGCG...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503128.5
CDS-3UTR GCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGCGGTCATGGATGCTaGTGCATCTCCTGCAACGCA +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVCGHGC*CISCNA
Trigger: TGCGTTGCAGGAGATGCAGCAGCATCCATGACCGCA...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
CDS-3UTR GCA 90 bp CAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCCCACGAGGATTTCTGGTGCCTaGTTCATCTTTATGCACTTT +
Preference number: 4 (lower is better)
Translates to: QCSGRRGTLQGHTPLNPTRISGA*FIFMHF
Trigger: AAAGTGCATAAAGATGAAGCAGGCACCAGAAATCCT...CGTGGGGTTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGCCGAGGATTTCTGGTaGCTGCTTCATCTTTATGCA +
Preference number: 4 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPAEDFW*LLHLYA
Trigger: TGCATAAAGATGAAGCAGGCACCAGAAATCCTCGGC...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGTGCATGACCCCCTCCTaGAGGCTACTGGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGCMTPS*RLLESW
Trigger: CCAGCTCTCCAGTAGCCTGCAGGAGGGGGTCATGCA...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGCAGTTTGGCATCGTGTaGGCCGGGTTCTCCATTAAA +
Preference number: 4 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWQFGIV*AGFSIK
Trigger: TTTAATGGAGAACCCGGCGCACACGATGCCAAACTG...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GCTATCAGACAGGAGCCTCTCCAGCGAGGGGAATCCGTGGCTTTACAGCCCTCCGCTTCGACAAGGCCCTaGTCCAGCAAGGAGTCATAT +
Preference number: 4 (lower is better)
Translates to: AIRQEPLQRGESVALQPSASTRP*SSKESY
Trigger: ATATGACTCCTTGCTGGAGCAGGGCCTTGTCGAAGC...GGAGGGCTGTAAAGCCACGGATTCCCCTCGCTGGAGAGGCTCCTGTCTGATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACTTCTCTTCATGGGAATaGACTCTTCTCTCACAGACT +
Preference number: 4 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYFSSWE*TLLSQT
Trigger: AGTCTGTGAGAGAAGAGTGCATTCCCATGAAGAGAA...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GGGAGACTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGGCCTTCTCTTCATGGGAATaGACTCTTCTCTCACAGACT +
Preference number: 4 (lower is better)
Translates to: GRLSSPDSWAGLDPATLAFSSWE*TLLSQT
Trigger: AGTCTGTGAGAGAAGAGTGCATTCCCATGAAGAGAA...GGCCAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGACTCTCCAGGGTCTCTaGAGAGCTACACAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLTLQGL*RATQFG
Trigger: GCCAAACTGTGTAGCTCTGCAGAGACCCTGGAGAGT...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTACTCTCCAGGGTCTCTaGAGAGCTACACAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTTLQGL*RATQFG
Trigger: GCCAAACTGTGTAGCTCTGCAGAGACCCTGGAGAGT...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CACAGGAGCAGCAAGCTTGCTCCTGACAGCATGGCTCTCACACAGCATCCTCCCCTGCATCTCCCTTCCTaGTTCGTGGCATGGAGACTG +
Preference number: 4 (lower is better)
Translates to: HRSSKLAPDSMALTQHPPLHLPS*FVAWRL
Trigger: CAGTCTCCATGCCACGAAGCAGGAAGGGAGATGCAG...GGGAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCTCCCCTGACCCTGAAGCATCTGGGTaGTCAGCTACCACCTCATCC +
Preference number: 4 (lower is better)
Translates to: VFSRSGQLPRPGRLSSPDPEASG*SATTSS
Trigger: GGATGAGGTGGTAGCTGAGCACCCAGATGCTTCAGG...GTCAGGGGAGCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp TTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCCTTGAGCGAGGAGGCTaGCTCCATGGCCTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: FVFRLHFRMGTPRARLPGLERGG*LHGLVR
Trigger: TCTTACAAGGCCATGGAGGCAGCCTCCTCGCTCAAG...GCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp AGCAGCCCCAGTCCCACCATCCGTGAACAGGTCTCGACCACCACTGAGTTGGTTCTTGAGCGAGGAGGCTaGCTCCATGGCCTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: SSPSPTIREQVSTTTELVLERGG*LHGLVR
Trigger: TCTTACAAGGCCATGGAGGCAGCCTCCTCGCTCAAG...AACCAACTCAGTGGTGGTCGAGACCTGTTCACGGATGGTGGGACTGGGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTACTTGAGCGAGGAGGCTaGCTCCATGGCCTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVLERGG*LHGLVR
Trigger: TCTTACAAGGCCATGGAGGCAGCCTCCTCGCTCAAG...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTCATTGCAGAACCAGCTaGCGTCAGGCATCTCGATGT +
Preference number: 4 (lower is better)
Translates to: GHVGKGTHGAPFSGCSRLHCRTS*RQASRC
Trigger: ACATCGAGATGCCTGACGGCAGCTGGTTCTGCAATG...AAGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGACCCCGAGGAATCCACTaGAATTGGAGGCTCCACACC +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRPRGIH*NWRLHT
Trigger: GGTGTGGAGCCTCCAATTGCAGTGGATTCCTCGGGG...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGGCTGTCCCGTCCTGGTaGTCCTTACAGAACGAATTG +
Preference number: 4 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWAVPSW*SLQNEL
Trigger: CAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGC...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGCTCCGGGCCAGTTCATaGTCGCCCTCTCCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLLRASS*SPSPAG
Trigger: GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAG...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGATCTTACAACACCATTaGTGCCACCACCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWILQHH*CHHLQG
Trigger: GCCCTGCAGGTGGTGGCAGCAATGGTGTTGTAAGAT...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GGACAGGTGGTAGGCCTTGGTGCAGAACTTGCGGTCACACAGCACCAGCTGCCCAGTTGTCACTTCCTGTaGTCTAAGCAGACTGCGGTC +
Preference number: 4 (lower is better)
Translates to: GQVVGLGAELAVTQHQLPSCHFL*SKQTAV
Trigger: GACCGCAGTCTGCTTAGAGCACAGGAAGTGACAACT...GGGCAGCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp GAAAGCCCAAGGCAGGCGAGGTGGAAAGCTCCGCAGCAGGGTCCTTCACAGAGCGTGATCAGCAGAGACTaGATCTTCCATCACCAGACC +
Preference number: 4 (lower is better)
Translates to: ESPRQARWKAPQQGPSQSVISRD*IFHHQT
Trigger: GGTCTGGTGATGGAAGATGCAGTCTCTGCTGATCAC...GCTCTGTGAAGGACCCTGCTGCGGAGCTTTCCACCTCGCCTGCCTTGGGCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGGCACCTCTCAGTAGGTaGCCTGGCAGAGGGCACATG +
Preference number: 4 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWAPLSR*PGRGHM
Trigger: CATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGC...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGGCACCTCTCAGTAGGTaGCCTGGCAGAGGGCACATG +
Preference number: 4 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGAPLSR*PGRGHM
Trigger: CATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGC...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACACGAGGCACGCACACCTaGCAGGCAGGCCTCCACCCC +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTRGTHT*QAGLHP
Trigger: GGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCG...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCGCCCCCTTCTCAGGGTaGTCCAGACTTCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLAPFSG*SRLPRV
Trigger: GACCCTGGGAAGTCTGGAGCACCCTGAGAAGGGGGC...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACCAGGTCCAAAGACACTaGAGTTTTTACCAAGGCATA +
Preference number: 4 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYQVQRH*SFYQGI
Trigger: TATGCCTTGGTAAAAACTGCAGTGTCTTTGGACCTG...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTCCCAGCCCTGCAGTCTTAACCGGCGAGTaGCCCTCAGAGGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: PKFHPNDILEVQLLPSPAVLTGE*PSEATA
Trigger: GGCCGTGGCCTCTGAGGGGCACTCGCCGGTTAAGAC...TGCAGGGCTGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp TTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGACTCCCCAAAGTGCACTaGAAAGCCGATTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: FVCTFVWGLRGLVSRAVRLPKVH*KADSAV
Trigger: AACAGCAGAATCGGCTTTGCAGTGCACTTTGGGGAG...TCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGATCTGCTCCCCAAAGTaGACTGCAAAGCCGATTCTG +
Preference number: 4 (lower is better)
Translates to: KHCEGDPASHGRVSPEERICSPK*TAKPIL
Trigger: CAGAATCGGCTTTGCAGTGCACTTTGGGGAGCAGAT...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CGGAAGAAAGGCCGGCCTGAGGACGGACAGCTGGGTTCTCACTTCAGGTGCCTGGACCACATTTTAAGCTaGCCATTCGGACACATCCCC +
Preference number: 4 (lower is better)
Translates to: RKKGRPEDGQLGSHFRCLDHILS*PFGHIP
Trigger: GGGGATGTGTCCGAATGGGCAGCTTAAAATGTGGTC...CAGGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGTGCAGAACTTGCGGTCGACCACATTTTAAGCTaGCCATTCGGACACATCCCC +
Preference number: 4 (lower is better)
Translates to: LAKAQAGQVVGLGAELAVDHILS*PFGHIP
Trigger: GGGGATGTGTCCGAATGGGCAGCTTAAAATGTGGTC...GACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp GCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGGCAGAGCTGGAAGATGGGCACTaGACACGCCGGGGTTTAGAT +
Preference number: 4 (lower is better)
Translates to: AAEGCPVLVLLTERIGAELEDGH*TRRGLD
Trigger: ATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAG...CTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTTCAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGGCCTTTTCCTTACCATaGAAAAATGCGGACACCTGG +
Preference number: 4 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKAFSLP*KNADTW
Trigger: CCAGGTGTCCGCATTTTTGCATGGTAAGGAAAAGGC...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCACATCAGAGGAGCCTCTaGTGCCAAGGCAACCCTTTC +
Preference number: 4 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPHQRSL*CQGNPF
Trigger: GAAAGGGTTGCCTTGGCAGCAGAGGCTCCTCTGATG...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp CACAGGAGCAGCAAGCTTGCTCCTGACAGCATGGCTCTCACACAGCATCCTCCCGCAGACAGCAGGCTGTaGACTGTCTGCGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: HRSSKLAPDSMALTQHPPADSRL*TVCEGL
Trigger: AAGTCCTTCGCAGACAGTGCACAGCCTGCTGTCTGC...GGGAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGAGGCCAGGTGGCTGCTaGTCCCAATTCAAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKRPGGC*SQFKAC
Trigger: GCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCCT...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGGTGAGGCCAGGTGGCTaGTGCTCCCAATTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKVRPGG*CSQFKA
Trigger: GGCCTTGAATTGGGAGCAGCAGCCACCTGGCCTCAC...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp CTCCGCTCCTCTAGGATGAGCCCACTCCTGGCATCTGAAGTGGGACAATGCTGCCTCCCAGAGCACCACTaGACACCACAGTCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LRSSRMSPLLASEVGQCCLPEHH*TPQSSS
Trigger: AGAAGACGACTGTGGTGTGCAGTGGTGCTCTGGGAG...GCAGCATTGTCCCACTTCAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGGCAATAGGGGGCTGCTaGTGTCTGCAACCCGCAGTC +
Preference number: 4 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWAIGGC*CLQPAV
Trigger: GACTGCGGGTTGCAGACACCAGCAGCCCCCTATTGC...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
CDS-3UTR CCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATCCACAGTACTGAGGTaGAGGACACCTGACGTGCAG +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVSTVLR*RTPDVQ
Trigger: CTGCACGTCAGGTGTCCTCCACCTCAGTACTGTGGA...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
CDS-3UTR CCA 90 bp CTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGGCCTCATGCACTGCCGAGGATTTCTaGTGCCTGCTTCATCTTTAT +
Preference number: 4 (lower is better)
Translates to: LSSPDSWAGLDPATLASCTAEDF*CLLHLY
Trigger: ATAAAGATGAAGCAGGCACCAGAAATCCTCGGCAGT...GCATGAGGCCAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp CTCCGCTCCTCTAGGATGAGCCCACTCCTGGCATCTGAAGTGGGACAATGCTGCTCGGAGTCTTCCCGTTaGCACTGCCGAGGATTTCTG +
Preference number: 4 (lower is better)
Translates to: LRSSRMSPLLASEVGQCCSESSR*HCRGFL
Trigger: CAGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGA...GCAGCATTGTCCCACTTCAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp CCGCCTTCTGACTCAGCAAGAGTAAGGGGCCTGTCCAACCCTTGCCTCACTACCTCGGAGTCTTCCCGTTaGCACTGCCGAGGATTTCTG +
Preference number: 4 (lower is better)
Translates to: PPSDSARVRGLSNPCLTTSESSR*HCRGFL
Trigger: CAGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGA...GGTAGTGAGGCAAGGGTTGGACAGGCCCCTTACTCTTGCTGAGTCAGAAGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCGGTAACCCGACACTTTaGACCACACCAAATCACCAA +
Preference number: 4 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPGNPTL*TTPNHQ
Trigger: TTGGTGATTTGGTGTGGTCCAAAGTGTCGGGTTACC...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAAGGTAACCCGACACTTTaGACCACACCAAATCACCAA +
Preference number: 4 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEGNPTL*TTPNHQ
Trigger: TTGGTGATTTGGTGTGGTCCAAAGTGTCGGGTTACC...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CCAGGGAGACTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGATAGCTGTGAAGGAGTaGATCTGCAGAAACCATGCA +
Preference number: 4 (lower is better)
Translates to: PGRLSSPDSWAGLDPATLIAVKE*ICRNHA
Trigger: TGCATGGTTTCTGCAGATCCACTCCTTCACAGCTAT...CAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTTCCGCCTTCTCTTCATaGGAATGCACTCTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPSAFSS*ECTLLS
Trigger: TGAGAGAAGAGTGCATTCCCATGAAGAGAAGGCGGA...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CCCTGCAGAAAATCCCACTCGGAGGAGTGGTCGCTGAGGATTCAGAGTGGCAAGACCCTACTCCTCTTCTaGGGTCAGCCTCTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: PCRKSHSEEWSLRIQSGKTLLLF*GQPLPS
Trigger: AGACGGCAGAGGCTGACCCCAGAAGAGGAGTAGGGT...CTTGCCACTCTGAATCCTCAGCGACCACTCCTCCGAGTGGGATTTTCTGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp CTCCGCTCCTCTAGGATGAGCCCACTCCTGGCATCTGAAGTGGGACAATGCTGCGTGGCATGGAGACTGTaGTCTTCTTCCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LRSSRMSPLLASEVGQCCVAWRL*SSSSQE
Trigger: CTCCTGGGAGGAAGAAGACCACAGTCTCCATGCCAC...GCAGCATTGTCCCACTTCAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGTCCTGCTTCGTGGCATaGAGACTGTGGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLSCFVA*RLWSSS
Trigger: GGAAGAAGACCACAGTCTCCATGCCACGAAGCAGGA...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTTCCTGCTTCGTGGCATaGAGACTGTGGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: GHVGKGTHGAPFSGCSRLSCFVA*RLWSSS
Trigger: GGAAGAAGACCACAGTCTCCATGCCACGAAGCAGGA...AAGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGTCTGCACTTTCGTATaGGGACTCCGAGGGCTCGTC +
Preference number: 4 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYVCTFV*GLRGLV
Trigger: GACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGAC...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGGGTGAACCTCCCTTCTaGCCTCCGGGAAAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWGEPPF*PPGKPK
Trigger: CTTGGGCTTTCCCGGAGGCCAGAAGGGAGGTTCACC...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGTTGGGTTTGAAGGGTTaGAAGCATGGCAGCTCACAC +
Preference number: 4 (lower is better)
Translates to: KHCEGDPASHGRVSPEERLGLKG*KHGSSH
Trigger: GTGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAA...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTTTCCGAGCAGTGAAGTaGGCAGTGCAGATGATGCTG +
Preference number: 4 (lower is better)
Translates to: GHVGKGTHGAPFSGCSRLFRAVK*AVQMML
Trigger: CAGCATCATCTGCACTGCCCACTTCACTGCTCGGAA...AAGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CGGGGTGCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGTTCCGAGCAGTGAAGTaGGCAGTGCAGATGATGCTG +
Preference number: 4 (lower is better)
Translates to: RGAAEGCPVLVLLTERIGFRAVK*AVQMML
Trigger: CAGCATCATCTGCACTGCCCACTTCACTGCTCGGAA...CCCAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTTCAGCTGCACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp TCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCACGTTGACGTGGGCGTaGTGTCGCTTCCCCTTCCGA +
Preference number: 4 (lower is better)
Translates to: SVCVSSALSYGDSEGSSPTLTWA*CRFPFR
Trigger: TCGGAAGGGGAAGCGACACCACGCCCACGTCAACGT...GGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGACGTTGACGTGGGCGTaGTGTCGCTTCCCCTTCCGA +
Preference number: 4 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWTLTWA*CRFPFR
Trigger: TCGGAAGGGGAAGCGACACCACGCCCACGTCAACGT...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGGCAGAGGTGGCAAAATGAAGCAGCTCACGTTGACGTaGGCGTGGTGTCGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SRPGAPYRTNWGRGGKMKQLTLT*AWCRFP
Trigger: GGGGAAGCGACACCACGCCCACGTCAACGTGAGCTG...CTTCATTTTGCCACCTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGACGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp AATGATCACAATGGCAGTTTCGAGGAATCCAGGGTCAGTCCTCACACGGGCCTCAGGGTGGAAGGCCGCTaGGCAGGACTCACAGCACAG +
Preference number: 4 (lower is better)
Translates to: NDHNGSFEESRVSPHTGLRVEGR*AGLTAQ
Trigger: CTGTGCTGTGAGTCCTGCCCAGCGGCCTTCCACCCT...GAGGCCCGTGTGAGGACTGACCCTGGATTCCTCGAAACTGCCATTGTGATCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTTTGGGGGAACATTTTTaGGATGGCAAACTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPLGEHF*DGKLLP
Trigger: CGGCAGAAGTTTGCCATCCCAAAAATGTTCCCCCAA...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCAGATGTGCTTGTATGGTaGGGGCTTGCGCTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: CGDTARPVPRTTFQVRASDVLVW*GLALAL
Trigger: GAGAGCGAGCGCAAGCCCCCACCATACAAGCACATC...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTAGTGAAGCACTGGTTCTaGCAGAACTCGCCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLVKHWF*QNSPAG
Trigger: TCCCGCGGGCGAGTTCTGCCAGAACCAGTGCTTCAC...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAACGCTTGGTGAAGCACTaGTTCTGGCAGAACTCGCCC +
Preference number: 4 (lower is better)
Translates to: LRARKGATRRRVSSDPWERLVKH*FWQNSP
Trigger: GGGCGAGTTCTGCCAGAACCAGTGCTTCACCAAGCG...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGGCAGAGTTGGTCTCTGGGTACTaGCGCTTGGTGAAGCACTGG +
Preference number: 4 (lower is better)
Translates to: AAEGCPVLVLLTERIGAELVSGY*RLVKHW
Trigger: CCAGTGCTTCACCAAGCGCCAGTACCCAGAGACCAA...CTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTTCAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp TTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGAGATGATCTTGGTCTCTaGGTACTGGCGCTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: FVCTFVWGLRGLVSRAVRDDLGL*VLALGE
Trigger: TTCACCAAGCGCCAGTACCCAGAGACCAAGATCATC...TCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp CGGAAGAAAGGCCGGCCTGAGGACGGACAGCTGGGTTCTCACTTCAGGTGCCTGGATGATCTTGGTCTCTaGGTACTGGCGCTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: RKKGRPEDGQLGSHFRCLDDLGL*VLALGE
Trigger: TTCACCAAGCGCCAGTACCCAGAGACCAAGATCATC...CAGGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TGTGCTTGTATGGTGGGGGCTTGCGCTCGCTCTCCTGTGTTTCTCGGGCTTCCCAAGGCTGTCCCGTCCTaGTGCTCCTTACAGAACGAA +
Preference number: 4 (lower is better)
Translates to: CACMVGACARSPVFLGLPKAVPS*CSLQNE
Trigger: TTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTT...GGGAAGCCCGAGAAACACAGGAGAGCGAGCGCAAGCCCCCACCATACAAGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTAAGGCTGTCCCGTCCTaGTGCTCCTTACAGAACGAA +
Preference number: 4 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTKAVPS*CSLQNE
Trigger: TTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTT...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCGGCCAAGCGGCCGCCTaGCGCTATTTGCCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: YFSLCFVCTFVWGLRGLVGQAAA*RYLPSV
Trigger: CACAGAGGGCAAATAGCGCCAGGCGGCCGCTTGGCC...GACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp AATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGGGCCAAGCGGCCGCCTaGCGCTATTTGCCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: NKVVLEDGHCTRRGLDVKGQAAA*RYLPSV
Trigger: CACAGAGGGCAAATAGCGCCAGGCGGCCGCTTGGCC...CTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CATTGCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTTGTACGTCTGTGTCCTaGCGGCTCGAGCTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: HCCHHLQGQLLTRMEKKRCTSVS*RLELGP
Trigger: AGGACCCAGCTCGAGCCGCCAGGACACAGACGTACA...ACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGATCACTCCTTTCGCCATaGAGCTCAGGGCCGCATCAG +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRSLLSP*SSGPHQ
Trigger: CTGATGCGGCCCTGAGCTCCATGGCGAAAGGAGTGA...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATTCACTCCTTTCGCCATaGAGCTCAGGGCCGCATCAG +
Preference number: 4 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYSLLSP*SSGPHQ
Trigger: CTGATGCGGCCCTGAGCTCCATGGCGAAAGGAGTGA...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTAAGATGGAAGCCACTCTaGGTGGCAGGAGAGCTAGAC +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVRWKPL*VAGELD
Trigger: GTCTAGCTCTCCTGCCACCCAGAGTGGCTTCCATCT...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTACACAGAGTGCTGAGATaGAAGCCACTCTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVHRVLR*KPLWVA
Trigger: TGCCACCCAGAGTGGCTTCCATCTCAGCACTCTGTG...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CATTGCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTGGGCAAAGGCACACATaGTGCCCCCTTCTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: HCCHHLQGQLLTRMEKKRGQRHT*CPLLRV
Trigger: CACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCC...ACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCAGGGCAAAGGCACACATaGTGCCCCCTTCTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPGQRHT*CPLLRV
Trigger: CACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCC...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGCGCGAGCAAGTCAGTaGCTACACAGCTCGTTTCCC +
Preference number: 4 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYARASQ*LHSSFP
Trigger: GGGAAACGAGCTGTGTAGCCACTGACTTGCTCGCGC...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGAGCGCGAGCAAGTCAGTaGCTACACAGCTCGTTTCCC +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRARASQ*LHSSFP
Trigger: GGGAAACGAGCTGTGTAGCCACTGACTTGCTCGCGC...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAGCGCGAGCAAGTCAGTaGCTACACAGCTCGTTTCCC +
Preference number: 4 (lower is better)
Translates to: LRARKGATRRRVSSDPWEARASQ*LHSSFP
Trigger: GGGAAACGAGCTGTGTAGCCACTGACTTGCTCGCGC...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCAACTCTAAGGTGTGTGTaGGGACACTGCCCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: CGDTARPVPRTTFQVRASTLRCV*GHCPAC
Trigger: ACAGGCCGGGCAGTGTCCCCACACACACCTTAGAGT...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGCCGGAAGGGATCTTTTaGGCAAGTGACAGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWPEGIF*ASDSGA
Trigger: GGCCCCGCTGTCACTTGCCCAAAAGATCCCTTCCGG...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCACGTGGTCAGCCCCAGTaGCGAGAAACCCTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPRGQPQ*RETLQA
Trigger: AGCTTGCAGGGTTTCTCGCCACTGGGGCTGACCACG...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGCGTGGTCAGCCCCAGTaGCGAGAAACCCTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGRGQPQ*RETLQA
Trigger: AGCTTGCAGGGTTTCTCGCCACTGGGGCTGACCACG...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCACAGCTGGGGGCGTaGTCAGCCCCAGTGGCGAGA +
Preference number: 4 (lower is better)
Translates to: YFSLCFVCTFVWGLRGLVSQLGA*SAPVAR
Trigger: TCTCGCCACTGGGGCTGACCACGCCCCCAGCTGTGA...GACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTATCCTCAGAACAAAGCTaGGCAGGGCCGAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLSSEQS*AGPRAS
Trigger: GCTGGCTCTCGGCCCTGCCCAGCTTTGTTCTGAGGA...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCGGAATCCTGAGGGATTaGGGCGGTTTTTGTGTTTTG +
Preference number: 4 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPGILRD*GGFCVL
Trigger: CAAAACACAAAAACCGCCCCAATCCCTCAGGATTCC...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCGGACACATCCCCCTGTaGGCGCACACGGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: LQFVFRLHFRMGTPRARLGHIPL*AHTGGY
Trigger: ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCC...GAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAACTGAGGACGGACAGCTaGGTTCTCACTTCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: LRARKGATRRRVSSDPWELRTDS*VLTSGA
Trigger: GGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAG...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AGAGTGGGAGGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGGGACCCAGCCAGCCATaGACGGGTGTCGCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: RVGGNLDIRRNSSVAVTLGPSQP*TGVAGR
Trigger: TCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCC...CAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCGGTAGTCCTGGAAGATaGGCACTGCACACGCCGGGG +
Preference number: 4 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLGSPGR*ALHTPG
Trigger: CCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACC...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GAAAGCCCAAGGCAGGCGAGGTGGAAAGCTCCGCAGCAGGGTCCTTCACAGAGCGGCTGTGACACCCCGTaGACACAGCATTTTACTCTA +
Preference number: 4 (lower is better)
Translates to: ESPRQARWKAPQQGPSQSGCDTP*TQHFTL
Trigger: TAGAGTAAAATGCTGTGTCCACGGGGTGTCACAGCC...GCTCTGTGAAGGACCCTGCTGCGGAGCTTTCCACCTCGCCTGCCTTGGGCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp GCTATCAGACAGGAGCCTCTCCAGCGAGGGGAATCCGTGGCTTTACAGCCCTCCCCTCAAGTTTTACACTaGAGAGCCACCTCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: AIRQEPLQRGESVALQPSPQVLH*RATSPL
Trigger: GAGAGGGGAGGTGGCTCTCCAGTGTAAAACTTGAGG...GGAGGGCTGTAAAGCCACGGATTCCCCTCGCTGGAGAGGCTCCTGTCTGATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCAATAGCCCCAAGCAGGTaGCAGCAAGGACCAAGTGTC +
Preference number: 4 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPIAPSR*QQGPSV
Trigger: GACACTTGGTCCTTGCTGCCACCTGCTTGGGGCTAT...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp CCAGGGAGACTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGGGCAGCAGCCCCAAATaGCTTTATTTTGCTATCATG +
Preference number: 4 (lower is better)
Translates to: PGRLSSPDSWAGLDPATLGSSPK*LYFAIM
Trigger: CATGATAGCAAAATAAAGCCATTTGGGGCTGCTGCC...CAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp AACTGTAAAGCAGCCCCAGTCCCACCATCCGTGAACAGGTCTCGACCACCACTGACACCCCATCCTTCCTaGGGACCATGGCAGAGACCT +
Preference number: 4 (lower is better)
Translates to: NCKAAPVPPSVNRSRPPLTPHPS*GPWQRP
Trigger: AGGTCTCTGCCATGGTCCCCAGGAAGGATGGGGTGT...CAGTGGTGGTCGAGACCTGTTCACGGATGGTGGGACTGGGGCTGCTTTACAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR CAA 72 bp ACTGAGCGGACACAGACTCTGTCAAGAACTTTCCCGTaGTTTCCCGCGTCCACCACAGCCATGCTGCGGCAC +
Preference number: 4 (lower is better)
Translates to: TERTQTLSRTFP*FPASTTAMLRH
Trigger: GTGCCGCAGCATGGCTGTGGTGGACGCGGGAAACAACGGGAAAGTTCTTGACAGAGTCTGTGTCCGCTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp CTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGTGCAGAACTTGCGGTCCACTTTACAACACTCTaGACAGAAAGGGGACTCTGC +
Preference number: 4 (lower is better)
Translates to: LAKAQAGQVVGLGAELAVHFTTL*TERGLC
Trigger: GCAGAGTCCCCTTTCTGTTCAGAGTGTTGTAAAGTG...GACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp CTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGTGCAGAACTTGCGGTCCCATTTTCTTCTGACTaGGACACATCAGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: LAKAQAGQVVGLGAELAVPFSSD*DTSAAL
Trigger: CAGTGCTGCTGATGTGTCTCAGTCAGAAGAAAATGG...GACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp CTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGAGACCTTTGTCCATTTTCTTCTaGCTGAGACACATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LHFRMGTPRARLPGCPRPLSIFF*LRHISS
Trigger: GCTGCTGATGTGTCTCAGTCAGAAGAAAATGGACAA...AGGTCTCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR TCA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGCCAAAGAACTGTACGTaGTACTGGCGTGCACTCTTT +
Preference number: 4 (lower is better)
Translates to: KHCEGDPASHGRVSPEERPKNCT*YWRALF
Trigger: AAAGAGTGCACGCCAGTATCACGTACAGTTCTTTGG...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTACAGCAGCTTCTTCACTaGCTCCTGAGGATTCTGCCA +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVQQLLH*LLRILP
Trigger: TGGCAGAATCCTCAGGAGTCAGTGAAGAAGCTGCTG...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGTTCCCTATGTCGGGGTaGCTCTCCAGGGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWFPMSG*LSRVSA
Trigger: TGCAGAGACCCTGGAGAGTCACCCCGACATAGGGAA...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GTCTGGAAGCAACAGGAATCAGGTGTGGTGTGTGAGTCGCCTTCCACCCCACCCGCCTCTGCCGTCTTTTaGGGAGTACTCTTCCCTATG +
Preference number: 4 (lower is better)
Translates to: VWKQQESGVVCESPSTPPASAVF*GVLFPM
Trigger: CATAGGGAAGAGTACTCCTCAAAAGACGGCAGAGGC...GGGTGGGGTGGAAGGCGACTCACACACCACACCTGATTCCTGTTGCTTCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp AGCAGCCCCAGTCCCACCATCCGTGAACAGGTCTCGACCACCACTGAGTTGGTTGCCTCTGCCGTCTTTTaGGGAGTACTCTTCCCTATG +
Preference number: 4 (lower is better)
Translates to: SSPSPTIREQVSTTTELVASAVF*GVLFPM
Trigger: CATAGGGAAGAGTACTCCTCAAAAGACGGCAGAGGC...AACCAACTCAGTGGTGGTCGAGACCTGTTCACGGATGGTGGGACTGGGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp GTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCTCCCCTGACTTCAATCTCCTCACCTaGAGCATCTGGGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: VFSRSGQLPRPGRLSSPDFNLLT*SIWVLS
Trigger: GCTGAGCACCCAGATGCTTCAGGTGAGGAGATTGAA...GTCAGGGGAGCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR TCA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGTTGCTGCCTGGCTCTTaGGCGAGGAGGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSELLPGS*ARRLPP
Trigger: TGGAGGCAGCCTCCTCGCTCAAGAGCCAGGCAGCAA...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp TTCATCTATGTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCTTGCTGCCTGGCTCTTaGGCGAGGAGGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: FIYVFSRSGQLPRPGRLSLLPGS*ARRLPP
Trigger: TGGAGGCAGCCTCCTCGCTCAAGAGCCAGGCAGCAA...GCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGACATAGATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR TCA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACGTTGGAGGCGATCACTaGGCATCCTGCTGCCAGACA +
Preference number: 4 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDVGGDH*ASCCQT
Trigger: TGTCTGGCAGCAGGATGCTCAGTGATCGCCTCCAAC...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTAGTTGGAGGCGATCACTaGGCATCCTGCTGCCAGACA +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLVGGDH*ASCCQT
Trigger: TGTCTGGCAGCAGGATGCTCAGTGATCGCCTCCAAC...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp ACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTAGCACCAGCTCACGTTaGCGTGGGCGTGGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: TSVCVSSALSYGDSEGSSSTSSR*RGRGVA
Trigger: AGCGACACCACGCCCACGTCAACGTGAGCTGGTGCT...AGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR TCA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCAGGTACTGGCGCTTGGTaGAGCACTGGTTCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPGTGAW*STGSGR
Trigger: TCTGCCAGAACCAGTGCTTCACCAAGCGCCAGTACC...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp AATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGGCTATTTGCCCTCTGTaGCTCTCCGCCAGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: NKVVLEDGHCTRRGLDVKAICPL*LSASPS
Trigger: GGAGGGGCTGGCGGAGAGTCACAGAGGGCAAATAGC...CTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TGCTGTTTTGACGTAAGCATTGGTAGTCCCTTACCTGCCGGAAGGGATCTTTTGCGCAGCGGACGCTGCTaGGGATGGCTCAGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: CCFDVSIGSPLPAGRDLLRSGRC*GWLSGG
Trigger: CCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCG...CAAAAGATCCCTTCCGGCAGGTAAGGGACTACCAATGCTTACGTCAAAACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CTTCTTCCCAGCCCTGCAGTCATTGCAGAACCAGCTGCCGTCAGGCATCTCGATGGTAACGCTGAGGAGTaGGGCTGTTTGTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: LLPSPAVIAEPAAVRHLDGNAEE*GCLSRN
Trigger: GTTCCTGGACAAACAGCCTCACTCCTCAGCGTTACC...ATCGAGATGCCTGACGGCAGCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp GTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCAGTGGGAGGGAACCTTaGCATTCGGAGAAATTCAAG +
Preference number: 4 (lower is better)
Translates to: VSSALSYGDSEGSSPGLSSGREP*HSEKFK
Trigger: CTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACT...GGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR TCA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGAGTGGCGACGGCGCTaGGAGCCAGAAAGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLEWRRR*EPERGQ
Trigger: TTGCCCCCTTTCTGGCTCTCAGCGCCGTCGCCACTC...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGGTCGGTGGTGATTTGTaGAATAGGTTTAGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWVGGDL*NRFSKN
Trigger: ATTTTTGCTAAACCTATTTCACAAATCACCACCGAC...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGGGAGAAGTTAGAGTCTaGACTGGAAAGCACTACTCC +
Preference number: 4 (lower is better)
Translates to: KHCEGDPASHGRVSPEERGEVRV*TGKHYS
Trigger: GGAGTAGTGCTTTCCAGTTCAGACTCTAACTTCTCC...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACAGGAGCATAAATCTATaGGCCGATCCAGTATTTTCT +
Preference number: 4 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYRSINL*ADPVFS
Trigger: AGAAAATACTGGATCGGCTCATAGATTTATGCTCCT...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp AATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGGAAGAAAGGCCGGCCTaGGGACGGACAGCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: NKVVLEDGHCTRRGLDVKEERPA*GRTAGF
Trigger: GAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTC...CTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAGGTATGGTGAGGCTGTaGCACCCCGTGGACACAGCA +
Preference number: 4 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRGMVRL*HPVDTA
Trigger: TGCTGTGTCCACGGGGTGTCACAGCCTCACCATACC...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp AATGATCACAATGGCAGTTTCGAGGAATCCAGGGTCAGTCCTCACACGGGCCTCGGTATGGTGAGGCTGTaGCACCCCGTGGACACAGCA +
Preference number: 4 (lower is better)
Translates to: NDHNGSFEESRVSPHTGLGMVRL*HPVDTA
Trigger: TGCTGTGTCCACGGGGTGTCACAGCCTCACCATACC...GAGGCCCGTGTGAGGACTGACCCTGGATTCCTCGAAACTGCCATTGTGATCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCGGTATGGTGAGGCTGTaGCACCCCGTGGACACAGCA +
Preference number: 4 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLGMVRL*HPVDTA
Trigger: TGCTGTGTCCACGGGGTGTCACAGCCTCACCATACC...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACTTTGTATTTAATTTCTaGCGGGGCATTTCACACCTC +
Preference number: 4 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYFVFNF*RGISHL
Trigger: GAGGTGTGAAATGCCCCGTCAGAAATTAAATACAAA...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCAAGATGCCACCTTCTGTaGCTGCAAAGCGCTCACCTA +
Preference number: 4 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPRCHLL*LQSAHL
Trigger: TAGGTGAGCGCTTTGCAGTCACAGAAGGTGGCATCT...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GGTGACTCTCCAGGGTCTCTGCAGAGCTACACAGTTTGGCCCTCCGCCTTCTCTAGATGCCACCTTCTGTaGCTGCAAAGCGCTCACCTA +
Preference number: 4 (lower is better)
Translates to: GDSPGSLQSYTVWPSAFSRCHLL*LQSAHL
Trigger: TAGGTGAGCGCTTTGCAGTCACAGAAGGTGGCATCT...AGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTGCAGAGACCCTGGAGAGTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR TCA 90 bp AACTGTAAAGCAGCCCCAGTCCCACCATCCGTGAACAGGTCTCGACCACCACTGAGAAGTGCCGCCTTCTaGCTCAGCAAGAGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: NCKAAPVPPSVNRSRPPLRSAAF*LSKSKG
Trigger: CCCCTTACTCTTGCTGAGTCAGAAGGCGGCACTTCT...CAGTGGTGGTCGAGACCTGTTCACGGATGGTGGGACTGGGGCTGCTTTACAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp CCGCCTTCTGACTCAGCAAGAGTAAGGGGCCTGTCCAACCCTTGCCTCACTACCATGAGTGGAAACAACTaGGGCACACCCCATCCTTCC +
Preference number: 4 (lower is better)
Translates to: PPSDSARVRGLSNPCLTTMSGNN*GTPHPS
Trigger: GGAAGGATGGGGTGTGCCTCAGTTGTTTCCACTCAT...GGTAGTGAGGCAAGGGTTGGACAGGCCCCTTACTCTTGCTGAGTCAGAAGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp GGCCTCGACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGACGGAGGAGTGGTCGCTaGGGATTCAGAGTGGCAAGC +
Preference number: 4 (lower is better)
Translates to: GLDPATLASCITLNQSLRRRSGR*GFRVAS
Trigger: GCTTGCCACTCTGAATCCTCAGCGACCACTCCTCCG...TCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTCGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp GGGAGACTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGGCCAGCCTTCGATATACATaGCTTAGGATCAGGAATAAC +
Preference number: 4 (lower is better)
Translates to: GRLSSPDSWAGLDPATLASLRYT*LRIRNN
Trigger: GTTATTCCTGATCCTAAGTCATGTATATCGAAGGCT...GGCCAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR TCA 90 bp CCCTGCAGAAAATCCCACTCGGAGGAGTGGTCGCTGAGGATTCAGAGTGGCAAGCATGCAAAGGGGGTGTaGCCCAATGGGTGTGTGTCA +
Preference number: 4 (lower is better)
Translates to: PCRKSHSEEWSLRIQSGKHAKGV*PNGCVS
Trigger: TGACACACACCCATTGGGTCACACCCCCTTTGCATG...CTTGCCACTCTGAATCCTCAGCGACCACTCCTCCGAGTGGGATTTTCTGCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420906.6
CDS-3UTR TCA 90 bp CATTGCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTGTGTCCTGTGTCCACTaGGACAGGACACCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: HCCHHLQGQLLTRMEKKRVSCVH*DRTPPN
Trigger: GTTTGGGGGTGTCCTGTCTCAGTGGACACAGGACAC...ACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677895.1
CDS-3UTR GCA 90 bp GACGCAGCGGACGCTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGGTGTCCAGAATTTTATaGCCAGGTAAATTATCATTC +
Preference number: 4 (lower is better)
Translates to: DAADAAEDGSVVGRRSLPVSRIL*PGKLSF
Trigger: GAATGATAATTTACCTGGGCATAAAATTCTGGACAC...CGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382895.7
CDS-3UTR GCA 90 bp CTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGGCCTCATGCACAGAAAGGGGACTCTaGTTGATGCTAAATTCCATC +
Preference number: 4 (lower is better)
Translates to: LSSPDSWAGLDPATLASCTERGL*LMLNSI
Trigger: GATGGAATTTAGCATCAAGCAGAGTCCCCTTTCTGT...GCATGAGGCCAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp AAGCACCAGCTCACGTTGACGTGGGCGTGGTGTCGCTTCCCCTTCCGAGCAGTGGCCGAGGATTTCTGGTaGCTGCTTCATCTTTATGCA +
Preference number: 4 (lower is better)
Translates to: KHQLTLTWAWCRFPFRAVAEDFW*LLHLYA
Trigger: TGCATAAAGATGAAGCAGGCACCAGAAATCCTCGGC...CACTGCTCGGAAGGGGAAGCGACACCACGCCCACGTCAACGTGAGCTGGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATTCTTCCCGTTGGCACTaGCGAGGATTTCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYSSRWH*RGFLVP
Trigger: AGGCACCAGAAATCCTCGGCAGTGCCAACGGGAAGA...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGATCTTCCCGTTGGCACTaGCGAGGATTTCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRSSRWH*RGFLVP
Trigger: AGGCACCAGAAATCCTCGGCAGTGCCAACGGGAAGA...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCTGCATGACCCCCTCCTaGAGGCTACTGGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSCMTPS*RLLESW
Trigger: CCAGCTCTCCAGTAGCCTGCAGGAGGGGGTCATGCA...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp CTTCTTCCCAGCCCTGCAGTCATTGCAGAACCAGCTGCCGTCAGGCATCTCGATTGGCCGTTAAACTTCTaGATGACCCCCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LLPSPAVIAEPAAVRHLDWPLNF*MTPSCR
Trigger: CCTGCAGGAGGGGGTCATGCAGAAGTTTAACGGCCA...ATCGAGATGCCTGACGGCAGCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp ACTTCCCGAAGGGCCGCTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGTACGTGATACTGGCGTaGACTCTTTTTCTGACCTTT +
Preference number: 4 (lower is better)
Translates to: TSRRAACQGPGRTGGRPWYVILA*TLFLTF
Trigger: AAAGGTCAGAAAAAGAGTGCACGCCAGTATCACGTA...CCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGGCTCCTCCACTGACATaGTTGCAGCTTCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLAPPLT*LQLLLL
Trigger: AAGCAGAAGAAGCTGCAAGCATGTCAGTGGAGGAGC...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGTTCTCCCAAAGACTCTaGAGCAATGCCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLFSQRL*SNASLL
Trigger: AAGGAGGCTGGCATTGCTGCAGAGTCTTTGGGAGAA...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp ACTTCCCGAAGGGCCGCTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGTTCTCTTCATGGGAATaGACTCTTCTCTCACAGACT +
Preference number: 4 (lower is better)
Translates to: TSRRAACQGPGRTGGRPWFSSWE*TLLSQT
Trigger: AGTCTGTGAGAGAAGAGTGCATTCCCATGAAGAGAA...CCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTAACTCTCCAGGGTCTCTaGAGAGCTACACAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVTLQGL*RATQFG
Trigger: GCCAAACTGTGTAGCTCTGCAGAGACCCTGGAGAGT...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGACTGCATCTCCCTTCCTaGTTCGTGGCATGGAGACTG +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRLHLPS*FVAWRL
Trigger: CAGTCTCCATGCCACGAAGCAGGAAGGGAGATGCAG...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGCTTGGTGTTGTAGCGTaGTCTCTGCTTCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLLGVVA*SLLLTQ
Trigger: CTGAGTGAGAAGCAGAGAGCACGCTACAACACCAAG...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCAGTTTGTGTTTCGTCTaGACTTTCGTATGGGGACTC +
Preference number: 4 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPSLCFV*TFVWGL
Trigger: GAGTCCCCATACGAAAGTGCAGACGAAACACAAACT...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AATGATCACAATGGCAGTTTCGAGGAATCCAGGGTCAGTCCTCACACGGGCCTCCACAGAGCAGGAGGCTaGCCGGCTTCTCACACAGCT +
Preference number: 4 (lower is better)
Translates to: NDHNGSFEESRVSPHTGLHRAGG*PASHTA
Trigger: AGCTGTGTGAGAAGCCGGGCAGCCTCCTGCTCTGTG...GAGGCCCGTGTGAGGACTGACCCTGGATTCCTCGAAACTGCCATTGTGATCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGATGATATCCTGGAAGTaGAGCTTCTTCCCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWMISWK*SFFPAL
Trigger: CAGGGCTGGGAAGAAGCTGCACTTCCAGGATATCAT...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp ACTTCCCGAAGGGCCGCTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGTTCAGCTTCTTGCAGTaGGTTTTTGAAGACTCTTCC +
Preference number: 4 (lower is better)
Translates to: TSRRAACQGPGRTGGRPWFSFLQ*VFEDSS
Trigger: GGAAGAGTCTTCAAAAACGCACTGCAAGAAGCTGAA...CCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAATTATTCACCTTGATGTaGTTGTATGGTGGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: FQSVLREAWDPAGPHTPELFTLM*LYGGGL
Trigger: CAAGCCCCCACCATACAAGCACATCAAGGTGAATAA...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CGGGGTGCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGGATGTCGTTCTCGTGTaGGTGCTTGATTCTCGCCAT +
Preference number: 4 (lower is better)
Translates to: RGAAEGCPVLVLLTERIGDVVLV*VLDSRH
Trigger: ATGGCGAGAATCAAGCACGCACACGAGAACGACATC...CCCAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTTCAGCTGCACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGACTTCCCTTCCCCTTTTaGTCTGCGCCGCCTCGTTTT +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRLPFPF*SAPPRF
Trigger: AAAACGAGGCGGCGCAGAGCAAAAGGGGAAGGGAAG...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCAGGTGGTAGGCCTTGGTaGAGAACTTGCGGTCACACA +
Preference number: 4 (lower is better)
Translates to: CGDTARPVPRTTFQVRASGGRPW*RTCGHT
Trigger: TGTGTGACCGCAAGTTCTGCACCAAGGCCTACCACC...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTAGCTGTCCCGTCCTGGTaGTCCTTACAGAACGAATTG +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVAVPSW*SLQNEL
Trigger: CAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGC...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTAGTTGTCACTTCCTGTaGTCTAAGCAGACTGCGGTC +
Preference number: 4 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTSCHFL*SKQTAV
Trigger: GACCGCAGTCTGCTTAGAGCACAGGAAGTGACAACT...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACAAAGGCACACATGGTaGCCCCTTCTCAGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLQRHTW*PLLRVL
Trigger: GAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTG...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCTTCTGTAAACTTCTCTaGAAGATGGATGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPFCKLL*KMDVSP
Trigger: GGGGGACACATCCATCTTGCAGAGAAGTTTACAGAA...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTATCTGCTCCCCAAAGTaGACTGCAAAGCCGATTCTG +
Preference number: 4 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTICSPK*TAKPIL
Trigger: CAGAATCGGCTTTGCAGTGCACTTTGGGGAGCAGAT...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TGTGCTTGTATGGTGGGGGCTTGCGCTCGCTCTCCTGTGTTTCTCGGGCTTCCCGGGTATGGGTTTAGGTaGAGATGCTGGTTTCGGATG +
Preference number: 4 (lower is better)
Translates to: CACMVGACARSPVFLGLPGYGFR*RCWFRM
Trigger: CATCCGAAACCAGCATCTGCACCTAAACCCATACCC...GGGAAGCCCGAGAAACACAGGAGAGCGAGCGCAAGCCCCCACCATACAAGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGGGGTATGGGTTTAGGTaGAGATGCTGGTTTCGGATG +
Preference number: 4 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLGYGFR*RCWFRM
Trigger: CATCCGAAACCAGCATCTGCACCTAAACCCATACCC...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTGACCACATTTTAAGCTaGCCATTCGGACACATCCCC +
Preference number: 4 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTDHILS*PFGHIP
Trigger: GGGGATGTGTCCGAATGGGCAGCTTAAAATGTGGTC...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GCTATCAGACAGGAGCCTCTCCAGCGAGGGGAATCCGTGGCTTTACAGCCCTCCCACACAGTCACCCTCTaGCTTTCACGACATGAAAGG +
Preference number: 4 (lower is better)
Translates to: AIRQEPLQRGESVALQPSHTVTL*LSRHER
Trigger: CCTTTCATGTCGTGAAAGGCAGAGGGTGACTGTGTG...GGAGGGCTGTAAAGCCACGGATTCCCCTCGCTGGAGAGGCTCCTGTCTGATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCACTGAGGCAGAAGAATTaGTGGAACCAAGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPLRQKN*WNQGGG
Trigger: TCCGCCTCCTTGGTTCCAGCAATTCTTCTGCCTCAG...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGAGGAAGCATGCTCCTTaGTCATCCAGTATAGGAATC +
Preference number: 4 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKRKHAP*SSSIGI
Trigger: GATTCCTATACTGGATGAGCAAGGAGCATGCTTCCT...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AACAGGGCCACCCCTTCCGTGCAAAGCCCTGCTGCAGCTCTGGACAGCCCCCAACCTGGATGGTCAGCATaGTTCAAAATATTACCCGAG +
Preference number: 4 (lower is better)
Translates to: NRATPSVQSPAAALDSPQPGWSA*FKILPE
Trigger: CTCGGGTAATATTTTGAAGCATGCTGACCATCCAGG...TTGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGTACGTGATACTGGCGTaGACTCTTTTTCTGACCTCT +
Preference number: 4 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKYVILA*TLFLTS
Trigger: AGAGGTCAGAAAAAGAGTGCACGCCAGTATCACGTA...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR CCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGATCGGAGTCTTCCCGTTaGCACTGCCGAGGATTTCTG +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRSESSR*HCRGFL
Trigger: CAGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGA...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATTCGGAGTCTTCCCGTTaGCACTGCCGAGGATTTCTG +
Preference number: 4 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYSESSR*HCRGFL
Trigger: CAGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGA...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGGGCAGGGCGTCGTaGCCGTTAAACTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: LRARKGATRRRVSSDPWEKGRAS*PLNFCM
Trigger: CATGCAGAAGTTTAACGGCCACGACGCCCTGCCCTT...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TGGTGTCGCTTCCCCTTCCGAGCAGTGAAGTGGGCAGTGCAGATGATGCTGTTGAAGGGCAGGGCGTCGTaGCCGTTAAACTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: WCRFPFRAVKWAVQMMLLKGRAS*PLNFCM
Trigger: CATGCAGAAGTTTAACGGCCACGACGCCCTGCCCTT...CAACAGCATCATCTGCACTGCCCACTTCACTGCTCGGAAGGGGAAGCGACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp GTCTGGAAGCAACAGGAATCAGGTGTGGTGTGTGAGTCGCCTTCCACCCCACCCTTTCAGCTTGTCGGCTaGAATAAAGGGCAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: VWKQQESGVVCESPSTPPFQLVG*NKGQGV
Trigger: GACGCCCTGCCCTTTATTCCAGCCGACAAGCTGAAA...GGGTGGGGTGGAAGGCGACTCACACACCACACCTGATTCCTGTTGCTTCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp CACAGGAGCAGCAAGCTTGCTCCTGACAGCATGGCTCTCACACAGCATCCTCCCACTCAAAACGCAGTTTaGCATCGTGTGCGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: HRSSKLAPDSMALTQHPPTQNAV*HRVRRV
Trigger: AACCCGGCGCACACGATGCCAAACTGCGTTTTGAGT...GGGAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp CCAGGGAGACTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGATCCCTTTCATTTCCTaGGACTCAAAACGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: PGRLSSPDSWAGLDPATLIPFIS*DSKRSL
Trigger: CAAACTGCGTTTTGAGTCCCAGGAAATGAAAGGGAT...CAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp CGGAAGAAAGGCCGGCCTGAGGACGGACAGCTGGGTTCTCACTTCAGGTGCCTGGGTAACCCGACACTTTaGACCACACCAAATCACCAA +
Preference number: 4 (lower is better)
Translates to: RKKGRPEDGQLGSHFRCLGNPTL*TTPNHQ
Trigger: TTGGTGATTTGGTGTGGTCCAAAGTGTCGGGTTACC...CAGGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTAACCCTACTCCTCTTCTaGGGTCAGCCTCTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLTLLLF*GQPLPS
Trigger: AGACGGCAGAGGCTGACCCCAGAAGAGGAGTAGGGT...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGAGTGGCATGGAGACTGTaGTCTTCTTCCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRVAWRL*SSSSQE
Trigger: CTCCTGGGAGGAAGAAGACCACAGTCTCCATGCCAC...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CACAGGAGCAGCAAGCTTGCTCCTGACAGCATGGCTCTCACACAGCATCCTCCCTCCTGCTTCGTGGCATaGAGACTGTGGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: HRSSKLAPDSMALTQHPPSCFVA*RLWSSS
Trigger: GGAAGAAGACCACAGTCTCCATGCCACGAAGCAGGA...GGGAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AGCAGCCCCAGTCCCACCATCCGTGAACAGGTCTCGACCACCACTGAGTTGGTTCCACCAGGGCAAACTTaGTGTTGTAGCGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SSPSPTIREQVSTTTELVPPGQT*CCSVLS
Trigger: AGAGAGCACGCTACAACACCAAGTTTGCCCTGGTGG...AACCAACTCAGTGGTGGTCGAGACCTGTTCACGGATGGTGGGACTGGGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATTTTTCGTTGCTGCCTaGCTCTTGAGCGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVFFVAA*LLSEEA
Trigger: AGCCTCCTCGCTCAAGAGCCAGGCAGCAACGAAAAA...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCATTTTTCGTTGCTGCCTaGCTCTTGAGCGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPFFVAA*LLSEEA
Trigger: AGCCTCCTCGCTCAAGAGCCAGGCAGCAACGAAAAA...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp CTCCGCTCCTCTAGGATGAGCCCACTCCTGGCATCTGAAGTGGGACAATGCTGCCTGAAGATGCTGCCGTaGAAGCCCGATTTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: LRSSRMSPLLASEVGQCCLKMLP*KPDFAS
Trigger: AGAAGCGAAATCGGGCTTCCACGGCAGCATCTTCAG...GCAGCATTGTCCCACTTCAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTACTGAAGATGCTGCCGTaGAAGCCCGATTTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVLKMLP*KPDFAS
Trigger: AGAAGCGAAATCGGGCTTCCACGGCAGCATCTTCAG...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CGTCTCCCGGGCTGTCCGAGACCTCATTCTCAGTTAAGGATGCAGAAGGAGATGGTCTGCACTTTCGTATaGGGACTCCGAGGGCTCGTC +
Preference number: 4 (lower is better)
Translates to: RLPGCPRPHSQLRMQKEMVCTFV*GLRGLV
Trigger: GACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGAC...CATCTCCTTCTGCATCCTTAACTGAGAATGAGGTCTCGGACAGCCCGGGAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511904.1
CDS-3UTR CCA 90 bp AATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGCCAAGGCAGGCGAGGTaGAAAGCTCCGCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: NKVVLEDGHCTRRGLDVKPRQAR*KAPQQG
Trigger: ACCCTGCTGCGGAGCTTTCCACCTCGCCTGCCTTGG...CTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCAGAAGGGTTGGAAGCATaGCAGCTCACACAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: CGDTARPVPRTTFQVRASEGLEA*QLTQLW
Trigger: CCACAGCTGTGTGAGCTGCCATGCTTCCAACCCTTC...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGGCAGAGTTCCGAGCAGTGAAGTaGGCAGTGCAGATGATGCTG +
Preference number: 4 (lower is better)
Translates to: AAEGCPVLVLLTERIGAEFRAVK*AVQMML
Trigger: CAGCATCATCTGCACTGCCCACTTCACTGCTCGGAA...CTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTTCAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp AGAGTGGGAGGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGGTGGAAGGCCGCTaGGCAGGACTCACAGCACAG +
Preference number: 4 (lower is better)
Translates to: RVGGNLDIRRNSSVAVTLRVEGR*AGLTAQ
Trigger: CTGTGCTGTGAGTCCTGCCCAGCGGCCTTCCACCCT...CAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGTTCAGGCAGTCAGGGTaGAAGGCCGCTGGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSEFRQSG*KAAGQD
Trigger: GTCCTGCCCAGCGGCCTTCCACCCTGACTGCCTGAA...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGACCCAAATGATATCCTaGAAGTGCAGCTTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGTQMIS*KCSFFP
Trigger: TGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGT...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTGGAACATTTTTGGGATaGCAAACTTCTGCCGGCCAC +
Preference number: 4 (lower is better)
Translates to: GHVGKGTHGAPFSGCSRLGTFLG*QTSAGH
Trigger: GTGGCCGGCAGAAGTTTGCCATCCCAAAAATGTTCC...AAGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGGATGTGCTTGTATGGTaGGGGCTTGCGCTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWDVLVW*GLALAL
Trigger: GAGAGCGAGCGCAAGCCCCCACCATACAAGCACATC...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AACAAATTCTCCCTTTCTGATGTCCCTCTTGGCGACCAGGCCCCACCCTTTGCCGATGTGCTTGTATGGTaGGGGCTTGCGCTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: NKFSLSDVPLGDQAPPFADVLVW*GLALAL
Trigger: GAGAGCGAGCGCAAGCCCCCACCATACAAGCACATC...GGCAAAGGGTGGGGCCTGGTCGCCAAGAGGGACATCAGAAAGGGAGAATTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAACTTGATGTGCTTGTATaGTGGGGGCTTGCGCTCGCT +
Preference number: 4 (lower is better)
Translates to: LRARKGATRRRVSSDPWELDVLV*WGLALA
Trigger: AGCGAGCGCAAGCCCCCACCATACAAGCACATCAAG...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GATATCCTGGAAGTGCAGCTTCTTCCCAGCCCTGCAGTCATTGCAGAACCAGCTGTGAAGCACTGGTTCTaGCAGAACTCGCCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: DILEVQLLPSPAVIAEPAVKHWF*QNSPAG
Trigger: TCCCGCGGGCGAGTTCTGCCAGAACCAGTGCTTCAC...AGCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAGCTGCACTTCCAGGATATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp TCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCCGCTTGGTGAAGCACTaGTTCTGGCAGAACTCGCCC +
Preference number: 4 (lower is better)
Translates to: SVCVSSALSYGDSEGSSPRLVKH*FWQNSP
Trigger: GGGCGAGTTCTGCCAGAACCAGTGCTTCACCAAGCG...GGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATTTGGTCTCTGGGTACTaGCGCTTGGTGAAGCACTGG +
Preference number: 4 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYLVSGY*RLVKHW
Trigger: CCAGTGCTTCACCAAGCGCCAGTACCCAGAGACCAA...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CGGAAGAAAGGCCGGCCTGAGGACGGACAGCTGGGTTCTCACTTCAGGTGCCTGGAATTGGGGCAGAGGTaGCAAAATGAAGTCGAAGGT +
Preference number: 4 (lower is better)
Translates to: RKKGRPEDGQLGSHFRCLELGQR*QNEVEG
Trigger: ACCTTCGACTTCATTTTGCCACCTCTGCCCCAATTC...CAGGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGGCCAAGCGGCCGCCTaGCGCTATTTGCCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLGQAAA*RYLPSV
Trigger: CACAGAGGGCAAATAGCGCCAGGCGGCCGCTTGGCC...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GGCTTCCCTCTGAAGCTTAATTTCACGAAAACGAGCTTCAGCTTCTTGCAGTGCCCTGGCGGCTCGAGCTaGGTCCTCCGGGCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: GFPLKLNFTKTSFSFLQCPGGSS*VLRASS
Trigger: TGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAGG...GCACTGCAAGAAGCTGAAGCTCGTTTTCGTGAAATTAAGCTTCAGAGGGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp GACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACACATTTCAGAGGAGAAGGATGGCTCAGTGGTaGGGAGGCGCTCCCTCCCGA +
Preference number: 4 (lower is better)
Translates to: DEFLATLGKSLRYTFQRRRMAQW*GGAPSR
Trigger: TCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCT...TCTCCTCTGAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGGTTTCTAGCGACCCTTaGGAAAAGCCTACGCTACAC +
Preference number: 4 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLVSSDP*EKPTLH
Trigger: GTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAAC...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CATTGCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTTCACTCCTTTCGCCATaGAGCTCAGGGCCGCATCAG +
Preference number: 4 (lower is better)
Translates to: HCCHHLQGQLLTRMEKKRSLLSP*SSGPHQ
Trigger: CTGATGCGGCCCTGAGCTCCATGGCGAAAGGAGTGA...ACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCACACAGAGTGCTGAGATaGAAGCCACTCTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: CGDTARPVPRTTFQVRASHRVLR*KPLWVA
Trigger: TGCCACCCAGAGTGGCTTCCATCTCAGCACTCTGTG...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCGGGCAAAGGCACACATaGTGCCCCCTTCTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLGQRHT*CPLLRV
Trigger: CACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCC...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGGCGCGAGCAAGTCAGTaGCTACACAGCTCGTTTCCC +
Preference number: 4 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGARASQ*LHSSFP
Trigger: GGGAAACGAGCTGTGTAGCCACTGACTTGCTCGCGC...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CACCGCCCCTGGATCCGGCCAAGCGGCCGCCTGGCGCTATTTGCCCTCTGTGACTTTCTTAGGACACTTTaGGAGAAGTTAGAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: HRPWIRPSGRLALFALCDFLRTL*EKLESE
Trigger: TTCAGACTCTAACTTCTCCCAAAGTGTCCTAAGAAA...GTCACAGAGGGCAAATAGCGCCAGGCGGCCGCTTGGCCGGATCCAGGGGCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTTTTCTTAGGACACTTTaGGAGAAGTTAGAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: TYEARTPARQASTPRTAPFLRTL*EKLESE
Trigger: TTCAGACTCTAACTTCTCCCAAAGTGTCCTAAGAAA...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGTTTCTTAGGACACTTTaGGAGAAGTTAGAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWFLRTL*EKLESE
Trigger: TTCAGACTCTAACTTCTCCCAAAGTGTCCTAAGAAA...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCAACTCTAAGGTGTGTGTaGGGACACTGCCCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPTLRCV*GHCPAC
Trigger: ACAGGCCGGGCAGTGTCCCCACACACACCTTAGAGT...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGACTCTAAGGTGTGTGTaGGGACACTGCCCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWTLRCV*GHCPAC
Trigger: ACAGGCCGGGCAGTGTCCCCACACACACCTTAGAGT...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACACTCTAAGGTGTGTGTaGGGACACTGCCCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDTLRCV*GHCPAC
Trigger: ACAGGCCGGGCAGTGTCCCCACACACACCTTAGAGT...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCCCGGAAGGGATCTTTTaGGCAAGTGACAGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLPEGIF*ASDSGA
Trigger: GGCCCCGCTGTCACTTGCCCAAAAGATCCCTTCCGG...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATTTTAGGTGCAGATGCTaGTTTCGGATGCCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDFRCRC*FRMPRN
Trigger: ATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAA...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CATTGCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTCTGAGGACGGACAGCTaGGTTCTCACTTCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: HCCHHLQGQLLTRMEKKRLRTDS*VLTSGA
Trigger: GGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAG...ACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACTGAGGACGGACAGCTaGGTTCTCACTTCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLLRTDS*VLTSGA
Trigger: GGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAG...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AACAAATTCTCCCTTTCTGATGTCCCTCTTGGCGACCAGGCCCCACCCTTTGCCCTGAGGACGGACAGCTaGGTTCTCACTTCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: NKFSLSDVPLGDQAPPFALRTDS*VLTSGA
Trigger: GGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAG...GGCAAAGGGTGGGGCCTGGTCGCCAAGAGGGACATCAGAAAGGGAGAATTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp GACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACACATTTCAGAGGAGAGGACCCAGCCAGCCATaGACGGGTGTCGCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: DEFLATLGKSLRYTFQRRGPSQP*TGVAGR
Trigger: TCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCC...TCTCCTCTGAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGGGTAGTCCTGGAAGATaGGCACTGCACACGCCGGGG +
Preference number: 4 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSEGSPGR*ALHTPG
Trigger: CCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACC...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGGGCTGTGACACCCCGTaGACACAGCATTTTACTCTA +
Preference number: 4 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLGCDTP*TQHFTL
Trigger: TAGAGTAAAATGCTGTGTCCACGGGGTGTCACAGCC...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GCTATCAGACAGGAGCCTCTCCAGCGAGGGGAATCCGTGGCTTTACAGCCCTCCTATGGGCTAGCTGGCTaGCCACCCATGCAAAATTCA +
Preference number: 4 (lower is better)
Translates to: AIRQEPLQRGESVALQPSYGLAG*PPMQNS
Trigger: TGAATTTTGCATGGGTGGCCAGCCAGCTAGCCCATA...GGAGGGCTGTAAAGCCACGGATTCCCCTCGCTGGAGAGGCTCCTGTCTGATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGCTCTTGGCAAGCCAATaGTCCTCCCTAAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWLLASQ*SSLSSF
Trigger: GAAAGAACTTAGGGAGGACCATTGGCTTGCCAAGAG...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp CCAGGGAGACTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGCACACCTACGTTCTGTaGCTATTTGTTGTTTTTGGC +
Preference number: 4 (lower is better)
Translates to: PGRLSSPDSWAGLDPATLHTYVL*LFVVFG
Trigger: GCCAAAAACAACAAATAGCCACAGAACGTAGGTGTG...CAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp GAGCCTAGGTCTGGAAGCAACAGGAATCAGGTGTGGTGTGTGAGTCGCCTTCCAACCATGGCAGAGACCTaGCCAGAAGTGCCGCCTTCT +
Preference number: 4 (lower is better)
Translates to: EPRSGSNRNQVWCVSRLPTMAET*PEVPPS
Trigger: AGAAGGCGGCACTTCTGGCCAGGTCTCTGCCATGGT...TGGAAGGCGACTCACACACCACACCTGATTCCTGTTGCTTCCAGACCTAGGCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp GTCTGGAAGCAACAGGAATCAGGTGTGGTGTGTGAGTCGCCTTCCACCCCACCCGCTGAGGATTCAGAGTaGCAAGCCGCAGAGCTCTAT +
Preference number: 4 (lower is better)
Translates to: VWKQQESGVVCESPSTPPAEDSE*QAAELY
Trigger: ATAGAGCTCTGCGGCTTGCCACTCTGAATCCTCAGC...GGGTGGGGTGGAAGGCGACTCACACACCACACCTGATTCCTGTTGCTTCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR CAA 72 bp TCCTGGAAGTGCAGCTTCTTCCCAGCCCTGCAGTCATaGCAGAACCAGCTGCCGTCAGGCATCTCGATGTTC +
Preference number: 4 (lower is better)
Translates to: SWKCSFFPALQS*QNQLPSGISMF
Trigger: GAACATCGAGATGCCTGACGGCAGCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAGCTGCACTTCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTCCATTTTCTTCTGACTaGGACACATCAGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTPFSSD*DTSAAL
Trigger: CAGTGCTGCTGATGTGTCTCAGTCAGAAGAAAATGG...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGTTGTCCATTTTCTTCTaGCTGAGACACATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KHCEGDPASHGRVSPEERLSIFF*LRHISS
Trigger: GCTGCTGATGTGTCTCAGTCAGAAGAAAATGGACAA...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGGCAGAGCCACATAGAGAAAGGTaGACTTGGCTTTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: AAEGCPVLVLLTERIGAEPHRER*TWLSAP
Trigger: AGGAGCGGAAAGCCAAGTTCACCTTTCTCTATGTGG...CTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTTCAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp CCGCCTTCTGACTCAGCAAGAGTAAGGGGCCTGTCCAACCCTTGCCTCACTACCCCACATAGAGAAAGGTaGACTTGGCTTTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: PPSDSARVRGLSNPCLTTPHRER*TWLSAP
Trigger: AGGAGCGGAAAGCCAAGTTCACCTTTCTCTATGTGG...GGTAGTGAGGCAAGGGTTGGACAGGCCCCTTACTCTTGCTGAGTCAGAAGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGTTCTTCACTGACTCCTaGGGATTCTGCCATTTCTCC +
Preference number: 4 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWFFTDS*GFCHFS
Trigger: GGAGAAATGGCAGAATCCTCAGGAGTCAGTGAAGAA...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATCAGCAGCTTCTTCACTaGCTCCTGAGGATTCTGCCA +
Preference number: 4 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYQQLLH*LLRILP
Trigger: TGGCAGAATCCTCAGGAGTCAGTGAAGAAGCTGCTG...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAACAGCAGCTTCTTCACTaGCTCCTGAGGATTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LRARKGATRRRVSSDPWEQQLLH*LLRILP
Trigger: TGGCAGAATCCTCAGGAGTCAGTGAAGAAGCTGCTG...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CCCTGCAGAAAATCCCACTCGGAGGAGTGGTCGCTGAGGATTCAGAGTGGCAAGCAGCAGCTTCTTCACTaGCTCCTGAGGATTCTGCCA +
Preference number: 4 (lower is better)
Translates to: PCRKSHSEEWSLRIQSGKQQLLH*LLRILP
Trigger: TGGCAGAATCCTCAGGAGTCAGTGAAGAAGCTGCTG...CTTGCCACTCTGAATCCTCAGCGACCACTCCTCCGAGTGGGATTTTCTGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp GCTGCCCGGCTTCTCACACAGCTGGCACACATACTCCTTTTTGGCAGTCACTCCCAGCAGACTCCACTGTaGCCTGAGCAGCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: AARLLTQLAHILLFGSHSQQTPL*PEQLFN
Trigger: ATTGAAGAGCTGCTCAGGTCACAGTGGAGTCTGCTG...GGAGTGACTGCCAAAAAGGAGTATGTGTGCCAGCTGTGTGAGAAGCCGGGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR TCA 90 bp TCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGCTAAACCCAAGAGCTaGAGATGCTGCCGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: SVCVSSALSYGDSEGSSPAKPKS*RCCRGS
Trigger: GCTTCCACGGCAGCATCTTCAGCTCTTGGGTTTAGC...GGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR TCA 90 bp GTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACTGGTGTGGGCTCCCACACTGAGTGTGTACGATaGTACGCCACCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VQYRAAGFKSNLTGVGSHTECVR*YATCSS
Trigger: GCTGCTGCAGGTGGCGTATCATCGTACACACTCAGT...GTGGGAGCCCACACCAGTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000678714.1
CDS-3UTR TCA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGAGTGGGCAGTGCAGATaGTGCTGTTGGAGGCGATCA +
Preference number: 4 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGSGQCR*CCWRRS
Trigger: TGATCGCCTCCAACAGCATCATCTGCACTGCCCACT...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp TCCTCGTCGATCAGCTCCCCAACGTACTCGTTAACAAATTCTCCCTTTCTGATGCTCTTCCGATCCCTCTaGCCCCCTGGTAGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: SSSISSPTYSLTNSPFLMLFRSL*PPGSGC
Trigger: GCAGCCGCTACCAGGGGGTCAGAGGGATCGGAAGAG...CATCAGAAAGGGAGAATTTGTTAACGAGTACGTTGGGGAGCTGATCGACGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACACTCTTCCGATCCCTCTaGCCCCCTGGTAGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTLFRSL*PPGSGC
Trigger: GCAGCCGCTACCAGGGGGTCAGAGGGATCGGAAGAG...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CAGGGCCGCATCAGTAAACACACACTTCAGTCGGTGGTGATTTGTGAAATAGGTCTCTTCCGATCCCTCTaGCCCCCTGGTAGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: QGRISKHTLQSVVICEIGLFRSL*PPGSGC
Trigger: GCAGCCGCTACCAGGGGGTCAGAGGGATCGGAAGAG...ACCTATTTCACAAATCACCACCGACTGAAGTGTGTGTTTACTGATGCGGCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCTCTCGGGCTTCCCTCTaGAGCTTAATTTCACGAAAA +
Preference number: 4 (lower is better)
Translates to: VSSALSYGDSEGSSPGLSSRASL*SLISRK
Trigger: TTTTCGTGAAATTAAGCTTCAGAGGGAAGCCCGAGA...GGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR TCA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCGCACTTAGGGATTTCTaGAATATCCGCTGTGTAGAT +
Preference number: 4 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPALRDF*NIRCVD
Trigger: ATCTACACAGCGGATATTTCAGAAATCCCTAAGTGC...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp AATGATCACAATGGCAGTTTCGAGGAATCCAGGGTCAGTCCTCACACGGGCCTCGGTACTGGCGCTTGGTaGAGCACTGGTTCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: NDHNGSFEESRVSPHTGLGTGAW*STGSGR
Trigger: TCTGCCAGAACCAGTGCTTCACCAAGCGCCAGTACC...GAGGCCCGTGTGAGGACTGACCCTGGATTCCTCGAAACTGCCATTGTGATCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTACAAATTCTCCCTTTCTaGTGTCCCTCTTGGCGACCA +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVQILPF*CPSWRP
Trigger: TGGTCGCCAAGAGGGACATCAGAAAGGGAGAATTTG...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp TGGTGTCGCTTCCCCTTCCGAGCAGTGAAGTGGGCAGTGCAGATGATGCTGTTGCCACACACGTCACAATaGTGCCAAGGACATTCCCAC +
Preference number: 4 (lower is better)
Translates to: WCRFPFRAVKWAVQMMLLPHTSQ*CQGHSH
Trigger: GTGGGAATGTCCTTGGCATCATTGTGACGTGTGTGG...CAACAGCATCATCTGCACTGCCCACTTCACTGCTCGGAAGGGGAAGCGACACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp AATGATCACAATGGCAGTTTCGAGGAATCCAGGGTCAGTCCTCACACGGGCCTCCAGTCTTGGTGCTTCTaGCCGATGCCGCCCCTAAGT +
Preference number: 4 (lower is better)
Translates to: NDHNGSFEESRVSPHTGLQSWCF*PMPPLS
Trigger: ACTTAGGGGCGGCATCGGTCAGAAGCACCAAGACTG...GAGGCCCGTGTGAGGACTGACCCTGGATTCCTCGAAACTGCCATTGTGATCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACACATTTCAGAGGAGAGCTATTTGCCCTCTGTaGCTCTCCGCCAGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: DEFLATLGKSLRYTFQRRAICPL*LSASPS
Trigger: GGAGGGGCTGGCGGAGAGTCACAGAGGGCAAATAGC...TCTCCTCTGAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACAGAGTGGCGACGGCGCTaGGAGCCAGAAAGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTEWRRR*EPERGQ
Trigger: TTGCCCCCTTTCTGGCTCTCAGCGCCGTCGCCACTC...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp AATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGGAAGATAGGCCCAGGTaGGAAGTAGGCCCAACCCGG +
Preference number: 4 (lower is better)
Translates to: NKVVLEDGHCTRRGLDVKEDRPR*EVGPTR
Trigger: CCGGGTTGGGCCTACTTCTCACCTGGGCCTATCTTC...CTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTAGGCAGAGGGCACATGTaGTCAGCAGAGACTGCATCT +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLGRGHM*SAETAS
Trigger: AGATGCAGTCTCTGCTGATCACATGTGCCCTCTGCC...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TGGTGTCGCTTCCCCTTCCGAGCAGTGAAGTGGGCAGTGCAGATGATGCTGTTGAAAAGCACCTGCTGCTaGATGTTCTCTCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: WCRFPFRAVKWAVQMMLLKSTCC*MFSPSL
Trigger: GAGGGAGGGAGAGAACATTCAGCAGCAGGTGCTTTT...CAACAGCATCATCTGCACTGCCCACTTCACTGCTCGGAAGGGGAAGCGACACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp CATTGCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTACAGCCACCAGCCAGTaGAACTTCCAGTCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: HCCHHLQGQLLTRMEKKRTATSQ*NFQSVL
Trigger: GAGCACTGACTGGAAGTTTCACTGGCTGGTGGCTGT...ACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTAACAGCCACCAGCCAGTaGAACTTCCAGTCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLTATSQ*NFQSVL
Trigger: GAGCACTGACTGGAAGTTTCACTGGCTGGTGGCTGT...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTGGAGAAGTTAGAGTCTaGACTGGAAAGCACTACTCC +
Preference number: 4 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTGEVRV*TGKHYS
Trigger: GGAGTAGTGCTTTCCAGTTCAGACTCTAACTTCTCC...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TGTGCTTGTATGGTGGGGGCTTGCGCTCGCTCTCCTGTGTTTCTCGGGCTTCCCAAAGCCTGGCTCCACTaGGTTATCAACGGGTATTGT +
Preference number: 4 (lower is better)
Translates to: CACMVGACARSPVFLGLPKAWLH*VINGYC
Trigger: ACAATACCCGTTGATAACTCAGTGGAGCCAGGCTTT...GGGAAGCCCGAGAAACACAGGAGAGCGAGCGCAAGCCCCCACCATACAAGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGAAAGCCTGGCTCCACTaGGTTATCAACGGGTATTGT +
Preference number: 4 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLKAWLH*VINGYC
Trigger: ACAATACCCGTTGATAACTCAGTGGAGCCAGGCTTT...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCAGATGCCAAGGAATCCTaGGGGATTGGGGCGGTTTTT +
Preference number: 4 (lower is better)
Translates to: CGDTARPVPRTTFQVRASDAKES*GIGAVF
Trigger: AAAAACCGCCCCAATCCCTCAGGATTCCTTGGCATC...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGTCTGCTTTTATGAGCTaGAGGGCAAGTAAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKSAFMS*RASKPF
Trigger: AAAAGGCTTACTTGCCCTTCAGCTCATAAAAGCAGA...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp AACAGGGCCACCCCTTCCGTGCAAAGCCCTGCTGCAGCTCTGGACAGCCCCCAATCTGCTTTTATGAGCTaGAGGGCAAGTAAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: NRATPSVQSPAAALDSPQSAFMS*RASKPF
Trigger: AAAAGGCTTACTTGCCCTTCAGCTCATAAAAGCAGA...TTGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp ATCCTGCAACATTTGAGCAGAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATTCCGCTCCTCTAGGATaGGCCCACTCCTGGCATCTG +
Preference number: 4 (lower is better)
Translates to: ILQHLSRANRGTQPALSHSAPLG*AHSWHL
Trigger: CAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGA...ATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTCTGCTCAAATGTTGCAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGTCCGCTCCTCTAGGATaGGCCCACTCCTGGCATCTG +
Preference number: 4 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKSAPLG*AHSWHL
Trigger: CAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGA...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCAACGTCTCCAGCTACATaGGACTCTCCAAATGCCCAT +
Preference number: 4 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPTSPAT*DSPNAH
Trigger: ATGGGCATTTGGAGAGTCTCATGTAGCTGGAGACGT...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCATCTATCAGTTATGGGCTACCACTGGCACAGTGCTaGGCAAACCCCCATCAGCCG +
Preference number: 4 (lower is better)
Translates to: EGAPMRWLTSNASISYGLPLAQC*ANPHQP
Trigger: CGGCTGATGGGGGTTTGCTCAGCACTGTGCCAGTGG...TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCATCTATCAGTTATGGGCTATGTCCCACTGTGTCCTaGGCAGCGGCCATCCCACAG +
Preference number: 4 (lower is better)
Translates to: EGAPMRWLTSNASISYGLCPTVS*AAAIPQ
Trigger: CTGTGGGATGGCCGCTGCTCAGGACACAGTGGGACA...TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCACGCACCAGGTGACGTaGCTCACTCGGAGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSTHQVT*LTRRSH
Trigger: ATGGCTTCTCCGAGTGAGTCACGTCACCTGGTGCGT...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TTCATCTATGTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCATCAGGTGTGGTGTGTaGGTCGCCTTCCACCCCACC +
Preference number: 4 (lower is better)
Translates to: FIYVFSRSGQLPRPGRLSIRCGV*VAFHPT
Trigger: GGTGGGGTGGAAGGCGACTCACACACCACACCTGAT...GCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGACATAGATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp CCCTGCAGAAAATCCCACTCGGAGGAGTGGTCGCTGAGGATTCAGAGTGGCAAGATGAGTGGAAACAACTaGGGCACACCCCATCCTTCC +
Preference number: 4 (lower is better)
Translates to: PCRKSHSEEWSLRIQSGKMSGNN*GTPHPS
Trigger: GGAAGGATGGGGTGTGCCTCAGTTGTTTCCACTCAT...CTTGCCACTCTGAATCCTCAGCGACCACTCCTCCGAGTGGGATTTTCTGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp TTACTCACACTGCAGCGTGGGCAGCTAAATGGCCTTCATACCAATGCCATGGTTCTAGGCCAGGGAGACTaGGCTCCCCTGACTCATGGG +
Preference number: 4 (lower is better)
Translates to: LLTLQRGQLNGLHTNAMVLGQGD*APLTHG
Trigger: CCCATGAGTCAGGGGAGCTCAGTCTCCCTGGCCTAG...AACCATGGCATTGGTATGAAGGCCATTTAGCTGCCCACGCTGCAGTGTGAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGCGTGCACTCTTTTTCTaGCCTCTGGGGAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKRALFF*PLGRRE
Trigger: CTCTCTCCTCCCCAGAGGTCAGAAAAAGAGTGCACG...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR GCA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGGTGTCCAGAATTTTATaGCCAGGTAAATTATCATTC +
Preference number: 4 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWVSRIL*PGKLSF
Trigger: GAATGATAATTTACCTGGGCATAAAATTCTGGACAC...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382895.7
CDS-3UTR GCA 90 bp AATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGGGAGGACACCTGACGTaGAGCAATAGGGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: NKVVLEDGHCTRRGLDVKGGHLT*SNRGLL
Trigger: CAGCAGCCCCCTATTGCTGCACGTCAGGTGTCCTCC...CTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
CDS-3UTR GCA 90 bp GTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACTGGTGTGGGCTCCCACTGCGGTCATGGATGCTaGTGCATCTCCTGCAACGCA +
Preference number: 4 (lower is better)
Translates to: VQYRAAGFKSNLTGVGSHCGHGC*CISCNA
Trigger: TGCGTTGCAGGAGATGCAGCAGCATCCATGACCGCA...GTGGGAGCCCACACCAGTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420906.6
CDS-3UTR GCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGAAACACTCTGATGGGTTaGGGTCATGGATGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRNTLMG*GHGCCC
Trigger: GCAGCAGCATCCATGACCGCAACCCATCAGAGTGTT...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
CDS-3UTR GCA 90 bp CCAGGGAGACTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGAGGATTTCTGGTGCCTaGTTCATCTTTATGCACTTT +
Preference number: 4 (lower is better)
Translates to: PGRLSSPDSWAGLDPATLRISGA*FIFMHF
Trigger: AAAGTGCATAAAGATGAAGCAGGCACCAGAAATCCT...CAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp TGTGCTTGTATGGTGGGGGCTTGCGCTCGCTCTCCTGTGTTTCTCGGGCTTCCCGCCGAGGATTTCTGGTaGCTGCTTCATCTTTATGCA +
Preference number: 4 (lower is better)
Translates to: CACMVGACARSPVFLGLPAEDFW*LLHLYA
Trigger: TGCATAAAGATGAAGCAGGCACCAGAAATCCTCGGC...GGGAAGCCCGAGAAACACAGGAGAGCGAGCGCAAGCCCCCACCATACAAGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGTGCATGACCCCCTCCTaGAGGCTACTGGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKCMTPS*RLLESW
Trigger: CCAGCTCTCCAGTAGCCTGCAGGAGGGGGTCATGCA...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTATGGCCGTTAAACTTCTaGATGACCCCCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLWPLNF*MTPSCR
Trigger: CCTGCAGGAGGGGGTCATGCAGAAGTTTAACGGCCA...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACTGGCCGTTAAACTTCTaGATGACCCCCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDWPLNF*MTPSCR
Trigger: CCTGCAGGAGGGGGTCATGCAGAAGTTTAACGGCCA...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GAGCCTAGGTCTGGAAGCAACAGGAATCAGGTGTGGTGTGTGAGTCGCCTTCCATGGCCGTTAAACTTCTaGATGACCCCCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: EPRSGSNRNQVWCVSRLPWPLNF*MTPSCR
Trigger: CCTGCAGGAGGGGGTCATGCAGAAGTTTAACGGCCA...TGGAAGGCGACTCACACACCACACCTGATTCCTGTTGCTTCCAGACCTAGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTACAGTTTGGCATCGTGTaGGCCGGGTTCTCCATTAAA +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVQFGIV*AGFSIK
Trigger: TTTAATGGAGAACCCGGCGCACACGATGCCAAACTG...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CCCTGCAGAAAATCCCACTCGGAGGAGTGGTCGCTGAGGATTCAGAGTGGCAAGGCTTCGACAAGGCCCTaGTCCAGCAAGGAGTCATAT +
Preference number: 4 (lower is better)
Translates to: PCRKSHSEEWSLRIQSGKASTRP*SSKESY
Trigger: ATATGACTCCTTGCTGGAGCAGGGCCTTGTCGAAGC...CTTGCCACTCTGAATCCTCAGCGACCACTCCTCCGAGTGGGATTTTCTGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATCTTAGACACAAGAGCTaGTTCGACAAGGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYLRHKS*FDKALL
Trigger: GAGCAGGGCCTTGTCGAAGCAGCTCTTGTGTCTAAG...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CCCTGCAGAAAATCCCACTCGGAGGAGTGGTCGCTGAGGATTCAGAGTGGCAAGCTTAGACACAAGAGCTaGTTCGACAAGGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PCRKSHSEEWSLRIQSGKLRHKS*FDKALL
Trigger: GAGCAGGGCCTTGTCGAAGCAGCTCTTGTGTCTAAG...CTTGCCACTCTGAATCCTCAGCGACCACTCCTCCGAGTGGGATTTTCTGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTAGATCTGCAGAAACCATaGAAGGCCACCAAGGGTAAC +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVDLQKP*KATKGN
Trigger: GTTACCCTTGGTGGCCTTGCATGGTTTCTGCAGATC...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCTCCCCTGACGATCTGCAGAAACCATaGAAGGCCACCAAGGGTAAC +
Preference number: 4 (lower is better)
Translates to: VFSRSGQLPRPGRLSSPDDLQKP*KATKGN
Trigger: GTTACCCTTGGTGGCCTTGCATGGTTTCTGCAGATC...GTCAGGGGAGCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp AGCAGCCCCAGTCCCACCATCCGTGAACAGGTCTCGACCACCACTGAGTTGGTTGATCTGCAGAAACCATaGAAGGCCACCAAGGGTAAC +
Preference number: 4 (lower is better)
Translates to: SSPSPTIREQVSTTTELVDLQKP*KATKGN
Trigger: GTTACCCTTGGTGGCCTTGCATGGTTTCTGCAGATC...AACCAACTCAGTGGTGGTCGAGACCTGTTCACGGATGGTGGGACTGGGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTAAAGACTCTGCAGCAATaGCAGCCTCCTTGGCTACTT +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVKTLQQ*QPPWLL
Trigger: AAGTAGCCAAGGAGGCTGGCATTGCTGCAGAGTCTT...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GTCTGGAAGCAACAGGAATCAGGTGTGGTGTGTGAGTCGCCTTCCACCCCACCCTTCTCCCAAAGACTCTaGAGCAATGCCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: VWKQQESGVVCESPSTPPFSQRL*SNASLL
Trigger: AAGGAGGCTGGCATTGCTGCAGAGTCTTTGGGAGAA...GGGTGGGGTGGAAGGCGACTCACACACCACACCTGATTCCTGTTGCTTCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp AACTGTAAAGCAGCCCCAGTCCCACCATCCGTGAACAGGTCTCGACCACCACTGACTCTCCAGGGTCTCTaGAGAGCTACACAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: NCKAAPVPPSVNRSRPPLTLQGL*RATQFG
Trigger: GCCAAACTGTGTAGCTCTGCAGAGACCCTGGAGAGT...CAGTGGTGGTCGAGACCTGTTCACGGATGGTGGGACTGGGGCTGCTTTACAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp CAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGTCTGGGGTCAGCCTCTaGCGTCTTTTGAGGAGTACT +
Preference number: 4 (lower is better)
Translates to: QFVFRLHFRMGTPRARLPSGVSL*RLLRST
Trigger: AGTACTCCTCAAAAGACGGCAGAGGCTGACCCCAGA...CGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR GCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGCCTGAAGCATCTGGGTaGTCAGCTACCACCTCATCC +
Preference number: 4 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWPEASG*SATTSS
Trigger: GGATGAGGTGGTAGCTGAGCACCCAGATGCTTCAGG...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACCCTGAAGCATCTGGGTaGTCAGCTACCACCTCATCC +
Preference number: 4 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDPEASG*SATTSS
Trigger: GGATGAGGTGGTAGCTGAGCACCCAGATGCTTCAGG...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGCCTGAAGCATCTGGGTaGTCAGCTACCACCTCATCC +
Preference number: 4 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGPEASG*SATTSS
Trigger: GGATGAGGTGGTAGCTGAGCACCCAGATGCTTCAGG...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCCCTGAAGCATCTGGGTaGTCAGCTACCACCTCATCC +
Preference number: 4 (lower is better)
Translates to: SVCVSSALSYGDSEGSSPPEASG*SATTSS
Trigger: GGATGAGGTGGTAGCTGAGCACCCAGATGCTTCAGG...GGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR GCA 90 bp GAGCCTAGGTCTGGAAGCAACAGGAATCAGGTGTGGTGTGTGAGTCGCCTTCCACCTGAAGCATCTGGGTaGTCAGCTACCACCTCATCC +
Preference number: 4 (lower is better)
Translates to: EPRSGSNRNQVWCVSRLPPEASG*SATTSS
Trigger: GGATGAGGTGGTAGCTGAGCACCCAGATGCTTCAGG...TGGAAGGCGACTCACACACCACACCTGATTCCTGTTGCTTCCAGACCTAGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCACTTGGTGTTGTAGCGTaGTCTCTGCTTCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPLGVVA*SLLLTQ
Trigger: CTGAGTGAGAAGCAGAGAGCACGCTACAACACCAAG...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp CCGCCTTCTGACTCAGCAAGAGTAAGGGGCCTGTCCAACCCTTGCCTCACTACCCTTGGTGTTGTAGCGTaGTCTCTGCTTCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: PPSDSARVRGLSNPCLTTLGVVA*SLLLTQ
Trigger: CTGAGTGAGAAGCAGAGAGCACGCTACAACACCAAG...GGTAGTGAGGCAAGGGTTGGACAGGCCCCTTACTCTTGCTGAGTCAGAAGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp CTCCGCTCCTCTAGGATGAGCCCACTCCTGGCATCTGAAGTGGGACAATGCTGCCTTGGTGTTGTAGCGTaGTCTCTGCTTCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: LRSSRMSPLLASEVGQCCLGVVA*SLLLTQ
Trigger: CTGAGTGAGAAGCAGAGAGCACGCTACAACACCAAG...GCAGCATTGTCCCACTTCAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCACTTGAGCGAGGAGGCTaGCTCCATGGCCTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPLERGG*LHGLVR
Trigger: TCTTACAAGGCCATGGAGGCAGCCTCCTCGCTCAAG...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACTGGTGTGGGCTCCCACCTTGAGCGAGGAGGCTaGCTCCATGGCCTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: VQYRAAGFKSNLTGVGSHLERGG*LHGLVR
Trigger: TCTTACAAGGCCATGGAGGCAGCCTCCTCGCTCAAG...GTGGGAGCCCACACCAGTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000678714.1
CDS-3UTR GCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGACATTGCAGAACCAGCTaGCGTCAGGCATCTCGATGT +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRHCRTS*RQASRC
Trigger: ACATCGAGATGCCTGACGGCAGCTGGTTCTGCAATG...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGACAGCCCTGCAGTCATTaGAGAACCAGCTGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRQPCSH*RTSCRQ
Trigger: CTGACGGCAGCTGGTTCTGCAATGACTGCAGGGCTG...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTAATGATATCCTGGAAGTaGAGCTTCTTCCCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVMISWK*SFFPAL
Trigger: CAGGGCTGGGAAGAAGCTGCACTTCCAGGATATCAT...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGAGACCTTCAGCTTCTTGCAGTaGGTTTTTGAAGACTCTTCC +
Preference number: 4 (lower is better)
Translates to: SALSYGDSEGSSPGLSETFSFLQ*VFEDSS
Trigger: GGAAGAGTCTTCAAAAACGCACTGCAAGAAGCTGAA...GGTCTCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATTTCAGCTTCTTGCAGTaGGTTTTTGAAGACTCTTCC +
Preference number: 4 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDFSFLQ*VFEDSS
Trigger: GGAAGAGTCTTCAAAAACGCACTGCAAGAAGCTGAA...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCTTATTCACCTTGATGTaGTTGTATGGTGGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: VSSALSYGDSEGSSPGLSLFTLM*LYGGGL
Trigger: CAAGCCCCCACCATACAAGCACATCAAGGTGAATAA...GGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCACTTCCCTTCCCCTTTTaGTCTGCGCCGCCTCGTTTT +
Preference number: 4 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPLPFPF*SAPPRF
Trigger: AAAACGAGGCGGCGCAGAGCAAAAGGGGAAGGGAAG...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGCTTCCCTTCCCCTTTTaGTCTGCGCCGCCTCGTTTT +
Preference number: 4 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGLPFPF*SAPPRF
Trigger: AAAACGAGGCGGCGCAGAGCAAAAGGGGAAGGGAAG...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGCCTTGGTGCAGAACTTaGGGTCACACAGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWPWCRT*GHTAPA
Trigger: AGCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGG...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GTAGTTCCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTCCCAGCTCCCGAAGGGCCGCTTaGCAAGGCCCAGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: VVPKFHPNDILEVQLLPSSRRAA*QGPGRT
Trigger: TGTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGA...GCTGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGGAACTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACATCCCGAAGGGCCGCTTaGCAAGGCCCAGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTSRRAA*QGPGRT
Trigger: TGTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGA...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGATCTTACAACACCATTaGTGCCACCACCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: QFVFRLHFRMGTPRARLPILQHH*CHHLQG
Trigger: GCCCTGCAGGTGGTGGCAGCAATGGTGTTGTAAGAT...CGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp AATGATCACAATGGCAGTTTCGAGGAATCCAGGGTCAGTCCTCACACGGGCCTCTGCGGTCTCACGCCCTaGAAAGTCACTCCTTTCGCC +
Preference number: 4 (lower is better)
Translates to: NDHNGSFEESRVSPHTGLCGLTP*KVTPFA
Trigger: GGCGAAAGGAGTGACTTTGCAGGGCGTGAGACCGCA...GAGGCCCGTGTGAGGACTGACCCTGGATTCCTCGAAACTGCCATTGTGATCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTCAGGTCCAAAGACACTaGAGTTTTTACCAAGGCATA +
Preference number: 4 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPQVQRH*SFYQGI
Trigger: TATGCCTTGGTAAAAACTGCAGTGTCTTTGGACCTG...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GATATCCTGGAAGTGCAGCTTCTTCCCAGCCCTGCAGTCATTGCAGAACCAGCTGAAACTTCCAGTCAGTaGTCAGGGAGGCGTGGGACC +
Preference number: 4 (lower is better)
Translates to: DILEVQLLPSPAVIAEPAETSSQ*SGRRGT
Trigger: GGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC...AGCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAGCTGCACTTCCAGGATATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTACTCCCCAAAGTGCACTaGAAAGCCGATTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVLPKVH*KADSAV
Trigger: AACAGCAGAATCGGCTTTGCAGTGCACTTTGGGGAG...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGAGGGTTTAGGTGCAGATaGTGGTTTCGGATGCCAAGG +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRGFRCR*WFRMPR
Trigger: CCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTAGGGTATGGGTTTAGGTaGAGATGCTGGTTTCGGATG +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVGYGFR*RCWFRM
Trigger: CATCCGAAACCAGCATCTGCACCTAAACCCATACCC...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGAGGTTCTCACTTCAGGTaGCTGAAGAGTTTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRGSHFR*LKSFPH
Trigger: GTGGGGGAAACTCTTCAGGCACCTGAAGTGAGAACC...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCAAAGACAGACAAACACTaGGAAGGGGACCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPKTDKH*EGDPAS
Trigger: GCTGGCTGGGTCCCCTTCGCAGTGTTTGTCTGTCTT...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAATGGAAGTGGGACAATGCTaGCACACATGGGACTGTCCC +
Preference number: 4 (lower is better)
Translates to: GQVAAAPNSRPALVKGKMEVGQC*HTWDCP
Trigger: GGGACAGTCCCATGTGTGGCAGCATTGTCCCACTTC...CATTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCACACACAGTCACCCTCTaGCTTTCACGACATGAAAGG +
Preference number: 4 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPHTVTL*LSRHER
Trigger: CCTTTCATGTCGTGAAAGGCAGAGGGTGACTGTGTG...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ATCCTGCAACATTTGAGCAGAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATCCCAGCTCACAGCCCTaGCATCACAGGTGCCACACA +
Preference number: 4 (lower is better)
Translates to: ILQHLSRANRGTQPALSHPSSQP*HHRCHT
Trigger: TGTGTGGCACCTGTGATGGCAGGGCTGTGAGCTGGG...ATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTCTGCTCAAATGTTGCAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAATGCATCAGAGGAGCCTCTaGTGCCAAGGCAACCCTTTC +
Preference number: 4 (lower is better)
Translates to: GQVAAAPNSRPALVKGKMHQRSL*CQGNPF
Trigger: GAAAGGGTTGCCTTGGCAGCAGAGGCTCCTCTGATG...CATTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCAAGGCTGTGCACTGTCTaGGAAGGACTTGAGGACAAT +
Preference number: 4 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPRLCTV*EGLEDN
Trigger: ATTGTCCTCAAGTCCTTCGCAGACAGTGCACAGCCT...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGTCGGGGAGGATCCAATaGTCTCGGCTCGGCAACCAC +
Preference number: 4 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKSGRIQ*SRLGNH
Trigger: GTGGTTGCCGAGCCGAGAGCATTGGATCCTCCCCGA...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GGGAGACTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGGCCTGGCCTTCATACCAATaGCATGGTTATCGTTATTAT +
Preference number: 4 (lower is better)
Translates to: GRLSSPDSWAGLDPATLAWPSYQ*HGYRYY
Trigger: ATAATAACGATAACCATGGCATTGGTATGAAGGCCA...GGCCAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp GAGCCTAGGTCTGGAAGCAACAGGAATCAGGTGTGGTGTGTGAGTCGCCTTCCAAGACCTGGCCAGAAGTaGCGCCTTCTGACTCAGCAA +
Preference number: 4 (lower is better)
Translates to: EPRSGSNRNQVWCVSRLPRPGQK*RLLTQQ
Trigger: TTGCTGAGTCAGAAGGCGGCACTTCTGGCCAGGTCT...TGGAAGGCGACTCACACACCACACCTGATTCCTGTTGCTTCCAGACCTAGGCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGTCCACAGTACTGAGGTaGAGGACACCTGACGTGCAG +
Preference number: 4 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWSTVLR*RTPDVQ
Trigger: CTGCACGTCAGGTGTCCTCCACCTCAGTACTGTGGA...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
CDS-3UTR CCA 90 bp GGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAATGTCCACAGTACTGAGGTaGAGGACACCTGACGTGCAG +
Preference number: 4 (lower is better)
Translates to: GQVAAAPNSRPALVKGKMSTVLR*RTPDVQ
Trigger: CTGCACGTCAGGTGTCCTCCACCTCAGTACTGTGGA...CATTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503128.5
CDS-3UTR CCA 90 bp CTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGGCCTCATGCTTGTATTTCAACAGGTaGTCTTTGTCTCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: LSSPDSWAGLDPATLASCLYFNR*SLSLPV
Trigger: CACTGGAAGAGACAAAGACCACCTGTTGAAATACAA...GCATGAGGCCAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGGGTAACCCGACACTTTaGACCACACCAAATCACCAA +
Preference number: 4 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWGNPTL*TTPNHQ
Trigger: TTGGTGATTTGGTGTGGTCCAAAGTGTCGGGTTACC...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCATAGCTGTGAAGGAGTaGATCTGCAGAAACCATGCA +
Preference number: 4 (lower is better)
Translates to: VSSALSYGDSEGSSPGLSIAVKE*ICRNHA
Trigger: TGCATGGTTTCTGCAGATCCACTCCTTCACAGCTAT...GGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGTATCCAAGCTCTTTCTaGGGCGTCACCAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWYPSSF*GVTKEL
Trigger: CAGTTCTTTGGTGACGCCCCAGAAAGAGCTTGGATA...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCACAGAGCTACACAGTTTaGCCCTCCGCCTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: CGDTARPVPRTTFQVRASQSYTV*PSAFSS
Trigger: TGAAGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTG...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CCCTGCAGAAAATCCCACTCGGAGGAGTGGTCGCTGAGGATTCAGAGTGGCAAGCAGAGCTACACAGTTTaGCCCTCCGCCTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: PCRKSHSEEWSLRIQSGKQSYTV*PSAFSS
Trigger: TGAAGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTG...CTTGCCACTCTGAATCCTCAGCGACCACTCCTCCGAGTGGGATTTTCTGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp CTCCCGGGCTGTCCGAGACCTCATTCTCAGTTAAGGATGCAGAAGGAGATGAACACCCTACTCCTCTTCTaGGGTCAGCCTCTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: LPGCPRPHSQLRMQKEMNTLLLF*GQPLPS
Trigger: AGACGGCAGAGGCTGACCCCAGAAGAGGAGTAGGGT...GTTCATCTCCTTCTGCATCCTTAACTGAGAATGAGGTCTCGGACAGCCCGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511904.1
CDS-3UTR CCA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGGTGGCATGGAGACTGTaGTCTTCTTCCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGVAWRL*SSSSQE
Trigger: CTCCTGGGAGGAAGAAGACCACAGTCTCCATGCCAC...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATTCCTGCTTCGTGGCATaGAGACTGTGGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYSCFVA*RLWSSS
Trigger: GGAAGAAGACCACAGTCTCCATGCCACGAAGCAGGA...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CCCTGCAGAAAATCCCACTCGGAGGAGTGGTCGCTGAGGATTCAGAGTGGCAAGTCCTGCTTCGTGGCATaGAGACTGTGGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PCRKSHSEEWSLRIQSGKSCFVA*RLWSSS
Trigger: GGAAGAAGACCACAGTCTCCATGCCACGAAGCAGGA...CTTGCCACTCTGAATCCTCAGCGACCACTCCTCCGAGTGGGATTTTCTGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATTCCCTTCCTGCTTCGTaGCATGGAGACTGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYSLPAS*HGDCGL
Trigger: AAGACCACAGTCTCCATGCCACGAAGCAGGAAGGGA...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGCAGAAGACCAAAAACTaGGATGCTGCATCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWQKTKN*DAASPF
Trigger: GAAGGGAGATGCAGCATCCCAGTTTTTGGTCTTCTG...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGCAGAAGACCAAAAACTaGGATGCTGCATCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLQKTKN*DAASPF
Trigger: GAAGGGAGATGCAGCATCCCAGTTTTTGGTCTTCTG...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTCAGAAGACCAAAAACTaGGATGCTGCATCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTQKTKN*DAASPF
Trigger: GAAGGGAGATGCAGCATCCCAGTTTTTGGTCTTCTG...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAACCACCAGGGCAAACTTaGTGTTGTAGCGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LRARKGATRRRVSSDPWEPPGQT*CCSVLS
Trigger: AGAGAGCACGCTACAACACCAAGTTTGCCCTGGTGG...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GCTATCAGACAGGAGCCTCTCCAGCGAGGGGAATCCGTGGCTTTACAGCCCTCCCAAATCCAACTTGACTaGTGTGGGCTCCCACAAAAG +
Preference number: 4 (lower is better)
Translates to: AIRQEPLQRGESVALQPSQIQLD*CGLPQK
Trigger: CTTTTGTGGGAGCCCACACCAGTCAAGTTGGATTTG...GGAGGGCTGTAAAGCCACGGATTCCCCTCGCTGGAGAGGCTCCTGTCTGATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCGTCTGCACTTTCGTATaGGGACTCCGAGGGCTCGTC +
Preference number: 4 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLVCTFV*GLRGLV
Trigger: GACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGAC...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AATGATCACAATGGCAGTTTCGAGGAATCCAGGGTCAGTCCTCACACGGGCCTCGTCTGCACTTTCGTATaGGGACTCCGAGGGCTCGTC +
Preference number: 4 (lower is better)
Translates to: NDHNGSFEESRVSPHTGLVCTFV*GLRGLV
Trigger: GACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGAC...GAGGCCCGTGTGAGGACTGACCCTGGATTCCTCGAAACTGCCATTGTGATCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACTCGCTCAGACTTTTTaGATGAGACAGATACTTCAG +
Preference number: 4 (lower is better)
Translates to: FQSVLREAWDPAGPHTPELAQTF*MRQILQ
Trigger: CTGAAGTATCTGTCTCATCCAAAAAGTCTGAGCGAG...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTACACATACTCCTTTTTaGCAGTCACTCCTCGCTCAG +
Preference number: 4 (lower is better)
Translates to: GHVGKGTHGAPFSGCSRLTHTPF*QSLLAQ
Trigger: CTGAGCGAGGAGTGACTGCCAAAAAGGAGTATGTGT...AAGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTCCCAGCCCTGCAGGTGAACCTCCCTTCTaGCCTCCGGGAAAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: PKFHPNDILEVQLLPSPAGEPPF*PPGKPK
Trigger: CTTGGGCTTTCCCGGAGGCCAGAAGGGAGGTTCACC...TGCAGGGCTGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGATTCCGAGCAGTGAAGTaGGCAGTGCAGATGATGCTG +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRFRAVK*AVQMML
Trigger: CAGCATCATCTGCACTGCCCACTTCACTGCTCGGAA...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCAGGGTGGAAGGCCGCTaGGCAGGACTCACAGCACAG +
Preference number: 4 (lower is better)
Translates to: RYFSLCFVCTFVWGLRGLRVEGR*AGLTAQ
Trigger: CTGTGCTGTGAGTCCTGCCCAGCGGCCTTCCACCCT...GAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGTTCAGGCAGTCAGGGTaGAAGGCCGCTGGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLFRQSG*KAAGQD
Trigger: GTCCTGCCCAGCGGCCTTCCACCCTGACTGCCTGAA...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGTTGGGGGAACATTTTTaGGATGGCAAACTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLLGEHF*DGKLLP
Trigger: CGGCAGAAGTTTGCCATCCCAAAAATGTTCCCCCAA...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTTGGGGGAACATTTTTaGGATGGCAAACTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTLGEHF*DGKLLP
Trigger: CGGCAGAAGTTTGCCATCCCAAAAATGTTCCCCCAA...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACTTGGTCTCTGGGTACTaGCGCTTGGTGAAGCACTGG +
Preference number: 4 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDLVSGY*RLVKHW
Trigger: CCAGTGCTTCACCAAGCGCCAGTACCCAGAGACCAA...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CATTGCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTTTGGTCTCTGGGTACTaGCGCTTGGTGAAGCACTGG +
Preference number: 4 (lower is better)
Translates to: HCCHHLQGQLLTRMEKKRLVSGY*RLVKHW
Trigger: CCAGTGCTTCACCAAGCGCCAGTACCCAGAGACCAA...ACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TGCTGTTTTGACGTAAGCATTGGTAGTCCCTTACCTGCCGGAAGGGATCTTTTGAGGATGGCTCAGTGGTaGGGAGGCGCTCCCTCCCGA +
Preference number: 4 (lower is better)
Translates to: CCFDVSIGSPLPAGRDLLRMAQW*GGAPSR
Trigger: TCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCT...CAAAAGATCCCTTCCGGCAGGTAAGGGACTACCAATGCTTACGTCAAAACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGCTGAGGATGGCTCAGTaGTGGGGAGGCGCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: RQILQFVFRLHFRMGTPRLRMAQ*WGGAPS
Trigger: GGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAG...CCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTATCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp CTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCAGGAACGCTGAGCTaGGCTCAGACGGTCATCAGT +
Preference number: 4 (lower is better)
Translates to: LQFVFRLHFRMGTPRARLPGTLS*AQTVIS
Trigger: ACTGATGACCGTCTGAGCCCAGCTCAGCGTTCCTGG...GAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAAAGCTTCTCACTAGGATaGAAAAGAAGCGTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: FQSVLREAWDPAGPHTPESFSLG*KRSVSE
Trigger: CTCAGAAACGCTTCTTTTCCATCCTAGTGAGAAGCT...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCAAGATGGAAGCCACTCTaGGTGGCAGGAGAGCTAGAC +
Preference number: 4 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPRWKPL*VAGELD
Trigger: GTCTAGCTCTCCTGCCACCCAGAGTGGCTTCCATCT...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGGCCCCTCAGGACACGTaGGCAAAGGCACACATGGTG +
Preference number: 4 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSEAPQDT*AKAHMV
Trigger: CACCATGTGTGCCTTTGCCCACGTGTCCTGAGGGGC...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAGCGCGAGCAAGTCAGTaGCTACACAGCTCGTTTCCC +
Preference number: 4 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRARASQ*LHSSFP
Trigger: GGGAAACGAGCTGTGTAGCCACTGACTTGCTCGCGC...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AATGATCACAATGGCAGTTTCGAGGAATCCAGGGTCAGTCCTCACACGGGCCTCACTCTAAGGTGTGTGTaGGGACACTGCCCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: NDHNGSFEESRVSPHTGLTLRCV*GHCPAC
Trigger: ACAGGCCGGGCAGTGTCCCCACACACACCTTAGAGT...GAGGCCCGTGTGAGGACTGACCCTGGATTCCTCGAAACTGCCATTGTGATCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CATGCACTCCTCCTCGTCGATCAGCTCCCCAACGTACTCGTTAACAAATTCTCCCCGGAAGGGATCTTTTaGGCAAGTGACAGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: HALLLVDQLPNVLVNKFSPEGIF*ASDSGA
Trigger: GGCCCCGCTGTCACTTGCCCAAAAGATCCCTTCCGG...GGAGAATTTGTTAACGAGTACGTTGGGGAGCTGATCGACGAGGAGGAGTGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp CAGGGCCGCATCAGTAAACACACACTTCAGTCGGTGGTGATTTGTGAAATAGGTTCACAGCTGGGGGCGTaGTCAGCCCCAGTGGCGAGA +
Preference number: 4 (lower is better)
Translates to: QGRISKHTLQSVVICEIGSQLGA*SAPVAR
Trigger: TCTCGCCACTGGGGCTGACCACGCCCCCAGCTGTGA...ACCTATTTCACAAATCACCACCGACTGAAGTGTGTGTTTACTGATGCGGCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCATATGGGCTAGCTGGCTaGCCACCCATGCAAAATTCA +
Preference number: 4 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPYGLAG*PPMQNS
Trigger: TGAATTTTGCATGGGTGGCCAGCCAGCTAGCCCATA...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCAGCGAGGGGAATCCGTaGCTTTACAGCCCTCCATGC +
Preference number: 4 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSSEGNP*LYSPPC
Trigger: GCATGGAGGGCTGTAAAGCCACGGATTCCCCTCGCT...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCAAGCCATTTGTGGAGGTaGCACATTCACCTGTACGGT +
Preference number: 4 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPSHLWR*HIHLYG
Trigger: ACCGTACAGGTGAATGTGCCACCTCCACAAATGGCT...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR CAA 72 bp TGCACACCACAGTCGTCTTCTAACCTGCACAGGCTTTaGTGTAGCCGTAGCCACATAGCCCCAAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: CTPQSSSNLHRL*CSRSHIAPSRW
Trigger: CCACCTGCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGACTGTGGTGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTTGTCCATTTTCTTCTaGCTGAGACACATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTLSIFF*LRHISS
Trigger: GCTGCTGATGTGTCTCAGTCAGAAGAAAATGGACAA...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp AGCAGCCCCAGTCCCACCATCCGTGAACAGGTCTCGACCACCACTGAGTTGGTTCCAAAGAACTGTACGTaGTACTGGCGTGCACTCTTT +
Preference number: 4 (lower is better)
Translates to: SSPSPTIREQVSTTTELVPKNCT*YWRALF
Trigger: AAAGAGTGCACGCCAGTATCACGTACAGTTCTTTGG...AACCAACTCAGTGGTGGTCGAGACCTGTTCACGGATGGTGGGACTGGGGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCACCAAAGAACTGTACGTaGTACTGGCGTGCACTCTTT +
Preference number: 4 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPPKNCT*YWRALF
Trigger: AAAGAGTGCACGCCAGTATCACGTACAGTTCTTTGG...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCTCCCCTGACCCAAAGAACTGTACGTaGTACTGGCGTGCACTCTTT +
Preference number: 4 (lower is better)
Translates to: VFSRSGQLPRPGRLSSPDPKNCT*YWRALF
Trigger: AAAGAGTGCACGCCAGTATCACGTACAGTTCTTTGG...GTCAGGGGAGCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR TCA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCACCACATAGAGAAAGGTaGACTTGGCTTTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: CGDTARPVPRTTFQVRASPHRER*TWLSAP
Trigger: AGGAGCGGAAAGCCAAGTTCACCTTTCTCTATGTGG...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp AATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGTTCCCTATGTCGGGGTaGCTCTCCAGGGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: NKVVLEDGHCTRRGLDVKFPMSG*LSRVSA
Trigger: TGCAGAGACCCTGGAGAGTCACCCCGACATAGGGAA...CTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp TACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTTCCCTATGTCGGGGTaGCTCTCCAGGGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: YFSLCFVCTFVWGLRGLVFPMSG*LSRVSA
Trigger: TGCAGAGACCCTGGAGAGTCACCCCGACATAGGGAA...GACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR TCA 90 bp AAACCAGGAGATGGTCCTCTCGGAAAACTCCGCTCCTCTAGGATGAGCCCACTCGCCTCTGCCGTCTTTTaGGGAGTACTCTTCCCTATG +
Preference number: 4 (lower is better)
Translates to: KPGDGPLGKLRSSRMSPLASAVF*GVLFPM
Trigger: CATAGGGAAGAGTACTCCTCAAAAGACGGCAGAGGC...GAGTGGGCTCATCCTAGAGGAGCGGAGTTTTCCGAGAGGACCATCTCCTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGGCCTCTGCCGTCTTTTaGGGAGTACTCTTCCCTATG +
Preference number: 4 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKASAVF*GVLFPM
Trigger: CATAGGGAAGAGTACTCCTCAAAAGACGGCAGAGGC...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTAGACTCCACTGTGACCTaGGCAGCTCTTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLDSTVT*AALQSP
Trigger: AGGAGATTGAAGAGCTGCTCAGGTCACAGTGGAGTC...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACAGCAGACTCCACTGTaGCCTGAGCAGCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLQQTPL*PEQLFN
Trigger: ATTGAAGAGCTGCTCAGGTCACAGTGGAGTCTGCTG...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp TTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGGCCGTTTTGTCAGTaGTTGTGTCTCTCTTCCGAA +
Preference number: 4 (lower is better)
Translates to: FVFRLHFRMGTPRARLPGWPFCQ*LCLSSE
Trigger: TTCGGAAGAGAGACACAATCACTGACAAAACGGCCA...GCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR TCA 90 bp CCGCCTTCTGACTCAGCAAGAGTAAGGGGCCTGTCCAACCCTTGCCTCACTACCTGGCCGTTTTGTCAGTaGTTGTGTCTCTCTTCCGAA +
Preference number: 4 (lower is better)
Translates to: PPSDSARVRGLSNPCLTTWPFCQ*LCLSSE
Trigger: TTCGGAAGAGAGACACAATCACTGACAAAACGGCCA...GGTAGTGAGGCAAGGGTTGGACAGGCCCCTTACTCTTGCTGAGTCAGAAGGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp TCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGGCAGAGGTGGCAAAATGAAGGCTAAACCCAAGAGCTaGAGATGCTGCCGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: SRPGAPYRTNWGRGGKMKAKPKS*RCCRGS
Trigger: GCTTCCACGGCAGCATCTTCAGCTCTTGGGTTTAGC...CTTCATTTTGCCACCTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGACGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp GTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACTGGTGTGGGCTCCCACGGTTCAAATCCAACTTaGCTGGTGTGGGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: VQYRAAGFKSNLTGVGSHGSNPT*LVWAPT
Trigger: TGTGGGAGCCCACACCAGTCAAGTTGGATTTGAACC...GTGGGAGCCCACACCAGTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000678714.1
CDS-3UTR TCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCACTGAGTGTGTACGATaGTACGCCACCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSTECVR*YATCSS
Trigger: GCTGCTGCAGGTGGCGTATCATCGTACACACTCAGT...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGCTCAGACTTTTTGGATaGGACAGATACTTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGLRLFG*DRYFSL
Trigger: CAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGAG...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACACACGAAACATGAGTaGATCCCTGAGGCACACTCG +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLHTKHE*IPEAHS
Trigger: CGAGTGTGCCTCAGGGATTCACTCATGTTTCGTGTG...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAACTTGCAGTGCGTTTTTaGAGACTCTTCCGATCCCTC +
Preference number: 4 (lower is better)
Translates to: LRARKGATRRRVSSDPWELAVRF*RLFRSL
Trigger: GAGGGATCGGAAGAGTCTTCAAAAACGCACTGCAAG...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCACTTGCAGTGCGTTTTTaGAGACTCTTCCGATCCCTC +
Preference number: 4 (lower is better)
Translates to: CGDTARPVPRTTFQVRASLAVRF*RLFRSL
Trigger: GAGGGATCGGAAGAGTCTTCAAAAACGCACTGCAAG...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGTCTCGGGCTTCCCTCTaGAGCTTAATTTCACGAAAA +
Preference number: 4 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWSRASL*SLISRK
Trigger: TTTTCGTGAAATTAAGCTTCAGAGGGAAGCCCGAGA...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTTCTCGGGCTTCCCTCTaGAGCTTAATTTCACGAAAA +
Preference number: 4 (lower is better)
Translates to: GHVGKGTHGAPFSGCSRLSRASL*SLISRK
Trigger: TTTTCGTGAAATTAAGCTTCAGAGGGAAGCCCGAGA...AAGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTAAAGGCTTATTCACCTTaGTGTGCTTGTATGGTGGGG +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVKAYSP*CACMVG
Trigger: CCCCACCATACAAGCACATCAAGGTGAATAAGCCTT...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACGCATGTAGAAGTGGGTaGTGTCGTTCTCGTGTGCGT +
Preference number: 4 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDACRSG*CRSRVR
Trigger: ACGCACACGAGAACGACATCACCCACTTCTACATGC...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCACCACACACGTCACAATaGTGCCAAGGACATTCCCAC +
Preference number: 4 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPPHTSQ*CQGHSH
Trigger: GTGGGAATGTCCTTGGCATCATTGTGACGTGTGTGG...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp AATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGAGACCCACAGAGTGCTaGGATGGAAGCCACTCTGGG +
Preference number: 4 (lower is better)
Translates to: NKVVLEDGHCTRRGLDVKRPTEC*DGSHSG
Trigger: CCCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCT...CTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGAGACCCACAGAGTGCTaGGATGGAAGCCACTCTGGG +
Preference number: 4 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSERPTEC*DGSHSG
Trigger: CCCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCT...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TGCTGTTTTGACGTAAGCATTGGTAGTCCCTTACCTGCCGGAAGGGATCTTTTGAGGGCCACACACCCCTaGACCCCACGCTTACAGGTC +
Preference number: 4 (lower is better)
Translates to: CCFDVSIGSPLPAGRDLLRATHP*TPRLQV
Trigger: GACCTGTAAGCGTGGGGTTCAGGGGTGTGTGGCCCT...CAAAAGATCCCTTCCGGCAGGTAAGGGACTACCAATGCTTACGTCAAAACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp AACAAATTCTCCCTTTCTGATGTCCCTCTTGGCGACCAGGCCCCACCCTTTGCCGATGCCAAGGAATCCTaGGGGATTGGGGCGGTTTTT +
Preference number: 4 (lower is better)
Translates to: NKFSLSDVPLGDQAPPFADAKES*GIGAVF
Trigger: AAAAACCGCCCCAATCCCTCAGGATTCCTTGGCATC...GGCAAAGGGTGGGGCCTGGTCGCCAAGAGGGACATCAGAAAGGGAGAATTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGGATGCCAAGGAATCCTaGGGGATTGGGGCGGTTTTT +
Preference number: 4 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGDAKES*GIGAVF
Trigger: AAAAACCGCCCCAATCCCTCAGGATTCCTTGGCATC...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGTTTGTATTTAATTTCTaGCGGGGCATTTCACACCTC +
Preference number: 4 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGFVFNF*RGISHL
Trigger: GAGGTGTGAAATGCCCCGTCAGAAATTAAATACAAA...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGAACTATCAAACCTGGTaGCAGCACCCAGTATTCCTA +
Preference number: 4 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWNYQTW*QHPVFL
Trigger: TAGGAATACTGGGTGCTGTCACCAGGTTTGATAGTT...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTAACTATCAAACCTGGTaGCAGCACCCAGTATTCCTA +
Preference number: 4 (lower is better)
Translates to: GHVGKGTHGAPFSGCSRLNYQTW*QHPVFL
Trigger: TAGGAATACTGGGTGCTGTCACCAGGTTTGATAGTT...AAGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCCAGCAAGCTTGCTCCTaGCAGCATGGCTCTCACACA +
Preference number: 4 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSQQACS*QHGSHT
Trigger: TGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTG...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGATCCAACCAAAAAGATaGGGCCTGTCGGGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKIQPKR*GLSGCW
Trigger: CCAACAGCCCGACAGGCCTCATCTTTTTGGTTGGAT...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp AAACCAGGAGATGGTCCTCTCGGAAAACTCCGCTCCTCTAGGATGAGCCCACTCATCCAACCAAAAAGATaGGGCCTGTCGGGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: KPGDGPLGKLRSSRMSPLIQPKR*GLSGCW
Trigger: CCAACAGCCCGACAGGCCTCATCTTTTTGGTTGGAT...GAGTGGGCTCATCCTAGAGGAGCGGAGTTTTCCGAGAGGACCATCTCCTGGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCCTGGGGGTGAGTCTCTaGGAACAGAGGAAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSLGVSL*EQRKSP
Trigger: TGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAG...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAATGAGATGCCACCTTCTGTaGCTGCAAAGCGCTCACCTA +
Preference number: 4 (lower is better)
Translates to: GQVAAAPNSRPALVKGKMRCHLL*LQSAHL
Trigger: TAGGTGAGCGCTTTGCAGTCACAGAAGGTGGCATCT...CATTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GGCCCCCAGTTATCATCTCCTCATAAACATGACAAAAACAGGACCCATGTCTACAGCCGCAGAGCTCTATaGGCCCCGCCCAGGTTGCCT +
Preference number: 4 (lower is better)
Translates to: GPQLSSPHKHDKNRTHVYSRRAL*APPRLP
Trigger: AGGCAACCTGGGCGGGGCTCATAGAGCTCTGCGGCT...GTAGACATGGGTCCTGTTTTTGTCATGTTTATGAGGAGATGATAACTGGGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCAGCAATAGGGGGCTaGTGGTGTCTGCAACCCGCA +
Preference number: 4 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLAAIGG*WCLQPA
Trigger: TGCGGGTTGCAGACACCAGCAGCCCCCTATTGCTGC...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
CDS-3UTR GCA 90 bp GAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCATCTATCAGTTATGGGCTAGCAGCAATAGGGGGCTaGTGGTGTCTGCAACCCGCA +
Preference number: 4 (lower is better)
Translates to: EGAPMRWLTSNASISYGLAAIGG*WCLQPA
Trigger: TGCGGGTTGCAGACACCAGCAGCCCCCTATTGCTGC...TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503128.5
CDS-3UTR GCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCTGCGGTCATGGATGCTaGTGCATCTCCTGCAACGCA +
Preference number: 4 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLCGHGC*CISCNA
Trigger: TGCGTTGCAGGAGATGCAGCAGCATCCATGACCGCA...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
CDS-3UTR GCA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCAAACACTCTGATGGGTTaGGGTCATGGATGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPNTLMG*GHGCCC
Trigger: GCAGCAGCATCCATGACCGCAACCCATCAGAGTGTT...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
CDS-3UTR GCA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGAACACTCTGATGGGTTaGGGTCATGGATGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKNTLMG*GHGCCC
Trigger: GCAGCAGCATCCATGACCGCAACCCATCAGAGTGTT...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503128.5
CDS-3UTR GCA 90 bp CGGAAGAAAGGCCGGCCTGAGGACGGACAGCTGGGTTCTCACTTCAGGTGCCTGACAGAAAGGGGACTCTaGTTGATGCTAAATTCCATC +
Preference number: 4 (lower is better)
Translates to: RKKGRPEDGQLGSHFRCLTERGL*LMLNSI
Trigger: GATGGAATTTAGCATCAAGCAGAGTCCCCTTTCTGT...CAGGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTAGGATTTCTGGTGCCTaGTTCATCTTTATGCACTTT +
Preference number: 4 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPRISGA*FIFMHF
Trigger: AAAGTGCATAAAGATGAAGCAGGCACCAGAAATCCT...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGAGGATTTCTGGTGCCTaGTTCATCTTTATGCACTTT +
Preference number: 4 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGRISGA*FIFMHF
Trigger: AAAGTGCATAAAGATGAAGCAGGCACCAGAAATCCT...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AATGATCACAATGGCAGTTTCGAGGAATCCAGGGTCAGTCCTCACACGGGCCTCTGGCCGTTAAACTTCTaGATGACCCCCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: NDHNGSFEESRVSPHTGLWPLNF*MTPSCR
Trigger: CCTGCAGGAGGGGGTCATGCAGAAGTTTAACGGCCA...GAGGCCCGTGTGAGGACTGACCCTGGATTCCTCGAAACTGCCATTGTGATCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGATGGCCGTTAAACTTCTaGATGACCCCCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRWPLNF*MTPSCR
Trigger: CCTGCAGGAGGGGGTCATGCAGAAGTTTAACGGCCA...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCAGCTTCGACAAGGCCCTaGTCCAGCAAGGAGTCATAT +
Preference number: 4 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPASTRP*SSKESY
Trigger: ATATGACTCCTTGCTGGAGCAGGGCCTTGTCGAAGC...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAGATCTGCAGAAACCATaGAAGGCCACCAAGGGTAAC +
Preference number: 4 (lower is better)
Translates to: LRARKGATRRRVSSDPWEDLQKP*KATKGN
Trigger: GTTACCCTTGGTGGCCTTGCATGGTTTCTGCAGATC...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGTACGTGATACTGGCGTaGACTCTTTTTCTGACCTTT +
Preference number: 4 (lower is better)
Translates to: KHCEGDPASHGRVSPEERYVILA*TLFLTF
Trigger: AAAGGTCAGAAAAAGAGTGCACGCCAGTATCACGTA...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CCCTGCAGAAAATCCCACTCGGAGGAGTGGTCGCTGAGGATTCAGAGTGGCAAGGCTCCTCCACTGACATaGTTGCAGCTTCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: PCRKSHSEEWSLRIQSGKAPPLT*LQLLLL
Trigger: AAGCAGAAGAAGCTGCAAGCATGTCAGTGGAGGAGC...CTTGCCACTCTGAATCCTCAGCGACCACTCCTCCGAGTGGGATTTTCTGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGAAAGACTCTGCAGCAATaGCAGCCTCCTTGGCTACTT +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRKTLQQ*QPPWLL
Trigger: AAGTAGCCAAGGAGGCTGGCATTGCTGCAGAGTCTT...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGTTCTCTTCATGGGAATaGACTCTTCTCTCACAGACT +
Preference number: 4 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWFSSWE*TLLSQT
Trigger: AGTCTGTGAGAGAAGAGTGCATTCCCATGAAGAGAA...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACACTCTCCAGGGTCTCTaGAGAGCTACACAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDTLQGL*RATQFG
Trigger: GCCAAACTGTGTAGCTCTGCAGAGACCCTGGAGAGT...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AAACCAGGAGATGGTCCTCTCGGAAAACTCCGCTCCTCTAGGATGAGCCCACTCTCTGGGGTCAGCCTCTaGCGTCTTTTGAGGAGTACT +
Preference number: 4 (lower is better)
Translates to: KPGDGPLGKLRSSRMSPLSGVSL*RLLRST
Trigger: AGTACTCCTCAAAAGACGGCAGAGGCTGACCCCAGA...GAGTGGGCTCATCCTAGAGGAGCGGAGTTTTCCGAGAGGACCATCTCCTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACTCTGGGGTCAGCCTCTaGCGTCTTTTGAGGAGTACT +
Preference number: 4 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDSGVSL*RLLRST
Trigger: AGTACTCCTCAAAAGACGGCAGAGGCTGACCCCAGA...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CTCCCGGGCTGTCCGAGACCTCATTCTCAGTTAAGGATGCAGAAGGAGATGAACCTGCATCTCCCTTCCTaGTTCGTGGCATGGAGACTG +
Preference number: 4 (lower is better)
Translates to: LPGCPRPHSQLRMQKEMNLHLPS*FVAWRL
Trigger: CAGTCTCCATGCCACGAAGCAGGAAGGGAGATGCAG...GTTCATCTCCTTCTGCATCCTTAACTGAGAATGAGGTCTCGGACAGCCCGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511904.1
CDS-3UTR GCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGAGACCAAAAACTGGGATaGTGCATCTCCCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRDQKLG*CISLPA
Trigger: AGCAGGAAGGGAGATGCAGCATCCCAGTTTTTGGTC...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCAGACCAAAAACTGGGATaGTGCATCTCCCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: CGDTARPVPRTTFQVRASDQKLG*CISLPA
Trigger: AGCAGGAAGGGAGATGCAGCATCCCAGTTTTTGGTC...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAACTCTTCCGAAGACTGTaGTTGTCCGTCCTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: LRARKGATRRRVSSDPWELFRRL*LSVLSL
Trigger: AAGACTCAGGACGGACAAGCACAGTCTTCGGAAGAG...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGAGTTTGTGTTTCGTCTaGACTTTCGTATGGGGACTC +
Preference number: 4 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWSLCFV*TFVWGL
Trigger: GAGTCCCCATACGAAAGTGCAGACGAAACACAAACT...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGCAGCCCTGCAGTCATTaGAGAACCAGCTGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSEQPCSH*RTSCRQ
Trigger: CTGACGGCAGCTGGTTCTGCAATGACTGCAGGGCTG...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGATGATATCCTGGAAGTaGAGCTTCTTCCCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: QFVFRLHFRMGTPRARLPMISWK*SFFPAL
Trigger: CAGGGCTGGGAAGAAGCTGCACTTCCAGGATATCAT...CGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGATGTATGGTGGGGGCTTaGGCTCGCTCTCCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRCMVGA*ARSPVF
Trigger: AAACACAGGAGAGCGAGCGCAAGCCCCCACCATACA...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCTGTATGGTGGGGGCTTaGGCTCGCTCTCCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLCMVGA*ARSPVF
Trigger: AAACACAGGAGAGCGAGCGCAAGCCCCCACCATACA...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGCCCGCGGGACACACCTaGGGGTGGCACTCAAACATC +
Preference number: 4 (lower is better)
Translates to: RQILQFVFRLHFRMGTPRPAGHT*GWHSNI
Trigger: GATGTTTGAGTGCCACCCGCAGGTGTGTCCCGCGGG...CCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTATCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGTCGTTCTCGTGTGCGTaGTTGATTCTCGCCATGCAC +
Preference number: 4 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWSFSCA*LILAMH
Trigger: GTGCATGGCGAGAATCAAGCACGCACACGAGAACGA...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGAGATGTCGTTCTCGTGTaGGTGCTTGATTCTCGCCAT +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRDVVLV*VLDSRH
Trigger: ATGGCGAGAATCAAGCACGCACACGAGAACGACATC...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AATGATCACAATGGCAGTTTCGAGGAATCCAGGGTCAGTCCTCACACGGGCCTCCTTCCCTTCCCCTTTTaGTCTGCGCCGCCTCGTTTT +
Preference number: 4 (lower is better)
Translates to: NDHNGSFEESRVSPHTGLLPFPF*SAPPRF
Trigger: AAAACGAGGCGGCGCAGAGCAAAAGGGGAAGGGAAG...GAGGCCCGTGTGAGGACTGACCCTGGATTCCTCGAAACTGCCATTGTGATCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGACTTCCCTTCCCCTTTTaGTCTGCGCCGCCTCGTTTT +
Preference number: 4 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRLPFPF*SAPPRF
Trigger: AAAACGAGGCGGCGCAGAGCAAAAGGGGAAGGGAAG...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AATGATCACAATGGCAGTTTCGAGGAATCCAGGGTCAGTCCTCACACGGGCCTCCCTTGGTGCAGAACTTaGGGTCACACAGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: NDHNGSFEESRVSPHTGLPWCRT*GHTAPA
Trigger: AGCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGG...GAGGCCCGTGTGAGGACTGACCCTGGATTCCTCGAAACTGCCATTGTGATCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACACATTTCAGAGGAGATCAGACGGTCATCAGTaGAGACGCAGCGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: DEFLATLGKSLRYTFQRRSDGHQ*RRSGRC
Trigger: GCAGCGTCCGCTGCGTCTGCACTGATGACCGTCTGA...TCTCCTCTGAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGATCTTACAACACCATTaGTGCCACCACCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGILQHH*CHHLQG
Trigger: GCCCTGCAGGTGGTGGCAGCAATGGTGTTGTAAGAT...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CATTGCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTATCTTACAACACCATTaGTGCCACCACCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: HCCHHLQGQLLTRMEKKRILQHH*CHHLQG
Trigger: GCCCTGCAGGTGGTGGCAGCAATGGTGTTGTAAGAT...ACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAGTTGTCACTTCCTGTaGTCTAAGCAGACTGCGGTC +
Preference number: 4 (lower is better)
Translates to: LRARKGATRRRVSSDPWESCHFL*SKQTAV
Trigger: GACCGCAGTCTGCTTAGAGCACAGGAAGTGACAACT...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCACTCCCCAAAGTGCACTaGAAAGCCGATTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: CGDTARPVPRTTFQVRASLPKVH*KADSAV
Trigger: AACAGCAGAATCGGCTTTGCAGTGCACTTTGGGGAG...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATCTCCCCAAAGTGCACTaGAAAGCCGATTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYLPKVH*KADSAV
Trigger: AACAGCAGAATCGGCTTTGCAGTGCACTTTGGGGAG...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GCTGCCCGGCTTCTCACACAGCTGGCACACATACTCCTTTTTGGCAGTCACTCCATCTGCTCCCCAAAGTaGACTGCAAAGCCGATTCTG +
Preference number: 4 (lower is better)
Translates to: AARLLTQLAHILLFGSHSICSPK*TAKPIL
Trigger: CAGAATCGGCTTTGCAGTGCACTTTGGGGAGCAGAT...GGAGTGACTGCCAAAAAGGAGTATGTGTGCCAGCTGTGTGAGAAGCCGGGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGAATCTGCTCCCCAAAGTaGACTGCAAAGCCGATTCTG +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRICSPK*TAKPIL
Trigger: CAGAATCGGCTTTGCAGTGCACTTTGGGGAGCAGAT...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGAGACCACATTTTAAGCTaGCCATTCGGACACATCCCC +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRDHILS*PFGHIP
Trigger: GGGGATGTGTCCGAATGGGCAGCTTAAAATGTGGTC...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGGGTTCTCACTTCAGGTaGCTGAAGAGTTTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGGSHFR*LKSFPH
Trigger: GTGGGGGAAACTCTTCAGGCACCTGAAGTGAGAACC...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AATGATCACAATGGCAGTTTCGAGGAATCCAGGGTCAGTCCTCACACGGGCCTCAAGACAGACAAACACTaGGAAGGGGACCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: NDHNGSFEESRVSPHTGLKTDKH*EGDPAS
Trigger: GCTGGCTGGGTCCCCTTCGCAGTGTTTGTCTGTCTT...GAGGCCCGTGTGAGGACTGACCCTGGATTCCTCGAAACTGCCATTGTGATCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GATATCCTGGAAGTGCAGCTTCTTCCCAGCCCTGCAGTCATTGCAGAACCAGCTCTGGAAGATGGGCACTaGACACGCCGGGGTTTAGAT +
Preference number: 4 (lower is better)
Translates to: DILEVQLLPSPAVIAEPALEDGH*TRRGLD
Trigger: ATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAG...AGCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAGCTGCACTTCCAGGATATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCGGGCTGTCCGAGACCTaGAGCAGCATCCTGGAATAT +
Preference number: 4 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLGLSET*SSILEY
Trigger: ATATTCCAGGATGCTGCTGCAGGTCTCGGACAGCCC...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000353275.9
CDS-3UTR GCA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGCTTACCATGCAAAAATaGGGACACCTGGGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKLTMQK*GHLGQD
Trigger: GTCCTGCCCCAGGTGTCCGCATTTTTGCATGGTAAG...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GCTATCAGACAGGAGCCTCTCCAGCGAGGGGAATCCGTGGCTTTACAGCCCTCCATGCCAATGTCATGCTaGTCTTTGGACACCATTTGG +
Preference number: 4 (lower is better)
Translates to: AIRQEPLQRGESVALQPSMPMSC*SLDTIW
Trigger: CCAAATGGTGTCCAAAGAGCAGCATGACATTGGCAT...GGAGGGCTGTAAAGCCACGGATTCCCCTCGCTGGAGAGGCTCCTGTCTGATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAATGCCTGTCCAAGGACTCTaGACATCACACACAGTCACC +
Preference number: 4 (lower is better)
Translates to: GQVAAAPNSRPALVKGKMPVQGL*TSHTVT
Trigger: GGTGACTGTGTGTGATGTGCAGAGTCCTTGGACAGG...CATTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AACAGGGCCACCCCTTCCGTGCAAAGCCCTGCTGCAGCTCTGGACAGCCCCCAACTTGAAAATACTATATaGCTGGATGGTCAGCATGCT +
Preference number: 4 (lower is better)
Translates to: NRATPSVQSPAAALDSPQLENTI*LDGQHA
Trigger: AGCATGCTGACCATCCAGGCATATAGTATTTTCAAG...TTGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCATCTATCAGTTATGGGCTATCGGGGAGGATCCAATaGTCTCGGCTCGGCAACCAC +
Preference number: 4 (lower is better)
Translates to: EGAPMRWLTSNASISYGLSGRIQ*SRLGNH
Trigger: GTGGTTGCCGAGCCGAGAGCATTGGATCCTCCCCGA...TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGGTCCATGACACAGATTaGAGAGATTCCGACTTTTTC +
Preference number: 4 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWVHDTD*RDSDFF
Trigger: GAAAAAGTCGGAATCTCTGCAATCTGTGTCATGGAC...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp CAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGTGCTTCCGAAGACTGTaGTTGTCCGTCCTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: QFVFRLHFRMGTPRARLPCFRRL*LSVLSL
Trigger: AAGACTCAGGACGGACAAGCACAGTCTTCGGAAGCA...CGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511904.1
CDS-3UTR CCA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGCAATTCCAACACTTTaGGAGGACGAGGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYAIPTL*EDEAGR
Trigger: TCTACCTGCCTCGTCCTCCCAAAGTGTTGGAATTGC...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382895.7
CDS-3UTR CCA 90 bp TCTCGACCACCACTGAGTTGGTTTGAGTCCCTGCAGAAAATCCCACTCGGAGGATCCACAGTACTGAGGTaGAGGACACCTGACGTGCAG +
Preference number: 4 (lower is better)
Translates to: SRPPLSWFESLQKIPLGGSTVLR*RTPDVQ
Trigger: CTGCACGTCAGGTGTCCTCCACCTCAGTACTGTGGA...TCCTCCGAGTGGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420906.6
CDS-3UTR CCA 90 bp GGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTACTGCCGAGGATTTCTaGTGCCTGCTTCATCTTTAT +
Preference number: 4 (lower is better)
Translates to: GHVGKGTHGAPFSGCSRLTAEDF*CLLHLY
Trigger: ATAAAGATGAAGCAGGCACCAGAAATCCTCGGCAGT...AAGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AAACCAGGAGATGGTCCTCTCGGAAAACTCCGCTCCTCTAGGATGAGCCCACTCAGGCTACTGGAGAGCTaGGCTTTGCTGAGGAACACA +
Preference number: 4 (lower is better)
Translates to: KPGDGPLGKLRSSRMSPLRLLES*ALLRNT
Trigger: TGTGTTCCTCAGCAAAGCCCAGCTCTCCAGTAGCCT...GAGTGGGCTCATCCTAGAGGAGCGGAGTTTTCCGAGAGGACCATCTCCTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GGCCTCGACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGAAAGGGCAGGGCGTCGTaGCCGTTAAACTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: GLDPATLASCITLNQSLRKGRAS*PLNFCM
Trigger: CATGCAGAAGTTTAACGGCCACGACGCCCTGCCCTT...TCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTCGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTATTTCAGCTTGTCGGCTaGAATAAAGGGCAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLFQLVG*NKGQGV
Trigger: GACGCCCTGCCCTTTATTCCAGCCGACAAGCTGAAA...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGACTCAAAACGCAGTTTaGCATCGTGTGCGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGTQNAV*HRVRRV
Trigger: AACCCGGCGCACACGATGCCAAACTGCGTTTTGAGT...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AGGTTGCCTAGGTCCCTGACCTTCCTGCACTGGAAGGCCTACACTCCTCTAATGACTCAAAACGCAGTTTaGCATCGTGTGCGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: RLPRSLTFLHWKAYTPLMTQNAV*HRVRRV
Trigger: AACCCGGCGCACACGATGCCAAACTGCGTTTTGAGT...CATTAGAGGAGTGTAGGCCTTCCAGTGCAGGAAGGTCAGGGACCTAGGCAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGACTCAAAACGCAGTTTaGCATCGTGTGCGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWTQNAV*HRVRRV
Trigger: AACCCGGCGCACACGATGCCAAACTGCGTTTTGAGT...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCAACTCAAAACGCAGTTTaGCATCGTGTGCGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPTQNAV*HRVRRV
Trigger: AACCCGGCGCACACGATGCCAAACTGCGTTTTGAGT...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGATCCCTTTCATTTCCTaGGACTCAAAACGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWIPFIS*DSKRSL
Trigger: CAAACTGCGTTTTGAGTCCCAGGAAATGAAAGGGAT...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCTTGTATTTCAACAGGTaGTCTTTGTCTCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPLYFNR*SLSLPV
Trigger: CACTGGAAGAGACAAAGACCACCTGTTGAAATACAA...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AGCAGCCCCAGTCCCACCATCCGTGAACAGGTCTCGACCACCACTGAGTTGGTTTATCCAAGCTCTTTCTaGGGCGTCACCAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: SSPSPTIREQVSTTTELVYPSSF*GVTKEL
Trigger: CAGTTCTTTGGTGACGCCCCAGAAAGAGCTTGGATA...AACCAACTCAGTGGTGGTCGAGACCTGTTCACGGATGGTGGGACTGGGGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCATATCCAAGCTCTTTCTaGGGCGTCACCAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPYPSSF*GVTKEL
Trigger: CAGTTCTTTGGTGACGCCCCAGAAAGAGCTTGGATA...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp CATGCACTCCTCCTCGTCGATCAGCTCCCCAACGTACTCGTTAACAAATTCTCCACCCTACTCCTCTTCTaGGGTCAGCCTCTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: HALLLVDQLPNVLVNKFSTLLLF*GQPLPS
Trigger: AGACGGCAGAGGCTGACCCCAGAAGAGGAGTAGGGT...GGAGAATTTGTTAACGAGTACGTTGGGGAGCTGATCGACGAGGAGGAGTGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp ATCCTGCAACATTTGAGCAGAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACCCTACTCCTCTTCTaGGGTCAGCCTCTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: ILQHLSRANRGTQPALSHTLLLF*GQPLPS
Trigger: AGACGGCAGAGGCTGACCCCAGAAGAGGAGTAGGGT...ATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTCTGCTCAAATGTTGCAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GGCCTCGACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGAGTGGCATGGAGACTGTaGTCTTCTTCCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GLDPATLASCITLNQSLRVAWRL*SSSSQE
Trigger: CTCCTGGGAGGAAGAAGACCACAGTCTCCATGCCAC...TCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTCGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGTCCCTTCCTGCTTCGTaGCATGGAGACTGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGSLPAS*HGDCGL
Trigger: AAGACCACAGTCTCCATGCCACGAAGCAGGAAGGGA...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTATCCCTTCCTGCTTCGTaGCATGGAGACTGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLSLPAS*HGDCGL
Trigger: AAGACCACAGTCTCCATGCCACGAAGCAGGAAGGGA...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCACCACCAGGGCAAACTTaGTGTTGTAGCGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPPPGQT*CCSVLS
Trigger: AGAGAGCACGCTACAACACCAAGTTTGCCCTGGTGG...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GGTTTGAGTCCCTGCAGAAAATCCCACTCGGAGGAGTGGTCGCTGAGGATTCAGCCACCAGGGCAAACTTaGTGTTGTAGCGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: GLSPCRKSHSEEWSLRIQPPGQT*CCSVLS
Trigger: AGAGAGCACGCTACAACACCAAGTTTGCCCTGGTGG...CTGAATCCTCAGCGACCACTCCTCCGAGTGGGATTTTCTGCAGGGACTCAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGCCACCAGGGCAAACTTaGTGTTGTAGCGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWPPGQT*CCSVLS
Trigger: AGAGAGCACGCTACAACACCAAGTTTGCCCTGGTGG...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACTGGTGTGGGCTCCCACAGGAGGCTGCCTCCATaGCCTTGTAAGAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: VQYRAAGFKSNLTGVGSHRRLPP*PCKSLF
Trigger: GAACAAGCTCTTACAAGGCCATGGAGGCAGCCTCCT...GTGGGAGCCCACACCAGTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000678714.1
CDS-3UTR CCA 90 bp GTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACTGGTGTGGGCTCCCACTTTTTCGTTGCTGCCTaGCTCTTGAGCGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: VQYRAAGFKSNLTGVGSHFFVAA*LLSEEA
Trigger: AGCCTCCTCGCTCAAGAGCCAGGCAGCAACGAAAAA...GTGGGAGCCCACACCAGTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000678714.1
CDS-3UTR CCA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACCTGAAGATGCTGCCGTaGAAGCCCGATTTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDLKMLP*KPDFAS
Trigger: AGAAGCGAAATCGGGCTTCCACGGCAGCATCTTCAG...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GGTTTGAGTCCCTGCAGAAAATCCCACTCGGAGGAGTGGTCGCTGAGGATTCAGCTGAAGATGCTGCCGTaGAAGCCCGATTTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: GLSPCRKSHSEEWSLRIQLKMLP*KPDFAS
Trigger: AGAAGCGAAATCGGGCTTCCACGGCAGCATCTTCAG...CTGAATCCTCAGCGACCACTCCTCCGAGTGGGATTTTCTGCAGGGACTCAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp GGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGAGACCTCATTCTCAGTTAAGGCTCGCTCAGACTTTTTaGATGAGACAGATACTTCAG +
Preference number: 4 (lower is better)
Translates to: GTPRARLPGCPRPHSQLRLAQTF*MRQILQ
Trigger: CTGAAGTATCTGTCTCATCCAAAAAGTCTGAGCGAG...CCTTAACTGAGAATGAGGTCTCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511904.1
CDS-3UTR CCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACACCAAGGCAGGCGAGGTaGAAAGCTCCGCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTPRQAR*KAPQQG
Trigger: ACCCTGCTGCGGAGCTTTCCACCTCGCCTGCCTTGG...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACACATTTCAGAGGAGAGGTGAACCTCCCTTCTaGCCTCCGGGAAAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: DEFLATLGKSLRYTFQRRGEPPF*PPGKPK
Trigger: CTTGGGCTTTCCCGGAGGCCAGAAGGGAGGTTCACC...TCTCCTCTGAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCATTGGGTTTGAAGGGTTaGAAGCATGGCAGCTCACAC +
Preference number: 4 (lower is better)
Translates to: CGDTARPVPRTTFQVRASLGLKG*KHGSSH
Trigger: GTGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAA...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGACGTTGACGTGGGCGTaGTGTCGCTTCCCCTTCCGA +
Preference number: 4 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLTLTWA*CRFPFR
Trigger: TCGGAAGGGGAAGCGACACCACGCCCACGTCAACGT...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACAAGGGTGGAAGGCCGCTaGGCAGGACTCACAGCACAG +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTRVEGR*AGLTAQ
Trigger: CTGTGCTGTGAGTCCTGCCCAGCGGCCTTCCACCCT...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATTGGGGGAACATTTTTaGGATGGCAAACTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVLGEHF*DGKLLP
Trigger: CGGCAGAAGTTTGCCATCCCAAAAATGTTCCCCCAA...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTGAAGCACTGGTTCTaGCAGAACTCGCCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: RYFSLCFVCTFVWGLRGLVKHWF*QNSPAG
Trigger: TCCCGCGGGCGAGTTCTGCCAGAACCAGTGCTTCAC...GAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp CTTCTTCCCAGCCCTGCAGTCATTGCAGAACCAGCTGCCGTCAGGCATCTCGATGATGATCTTGGTCTCTaGGTACTGGCGCTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: LLPSPAVIAEPAAVRHLDDDLGL*VLALGE
Trigger: TTCACCAAGCGCCAGTACCCAGAGACCAAGATCATC...ATCGAGATGCCTGACGGCAGCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp TGGTGTCGCTTCCCCTTCCGAGCAGTGAAGTGGGCAGTGCAGATGATGCTGTTGGATGATCTTGGTCTCTaGGTACTGGCGCTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: WCRFPFRAVKWAVQMMLLDDLGL*VLALGE
Trigger: TTCACCAAGCGCCAGTACCCAGAGACCAAGATCATC...CAACAGCATCATCTGCACTGCCCACTTCACTGCTCGGAAGGGGAAGCGACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp TGTGCTTGTATGGTGGGGGCTTGCGCTCGCTCTCCTGTGTTTCTCGGGCTTCCCGAGAGTAGTTTCCTTTaGGGCCAGCGTCTATTATAC +
Preference number: 4 (lower is better)
Translates to: CACMVGACARSPVFLGLPESSFL*GQRLLY
Trigger: GTATAATAGACGCTGGCCCCAAAGGAAACTACTCTC...GGGAAGCCCGAGAAACACAGGAGAGCGAGCGCAAGCCCCCACCATACAAGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCGGTCGTCGAGGTCTTTaGTCTATCCCCGAGGAATCC +
Preference number: 4 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLGRRGL*SIPEES
Trigger: GGATTCCTCGGGGATAGACCAAAGACCTCGACGACC...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTAGAATTGGGGCAGAGGTaGCAAAATGAAGTCGAAGGT +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVELGQR*QNEVEG
Trigger: ACCTTCGACTTCATTTTGCCACCTCTGCCCCAATTC...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACAAGGCTGTCCCGTCCTaGTGCTCCTTACAGAACGAA +
Preference number: 4 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDKAVPS*CSLQNE
Trigger: TTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTT...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCACCTGGCGGCTCGAGCTaGGTCCTCCGGGCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSPGGSS*VLRASS
Trigger: TGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAGG...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAGTTTCTAGCGACCCTTaGGAAAAGCCTACGCTACAC +
Preference number: 4 (lower is better)
Translates to: LRARKGATRRRVSSDPWEVSSDP*EKPTLH
Trigger: GTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAAC...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGACACAGAGTGCTGAGATaGAAGCCACTCTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRHRVLR*KPLWVA
Trigger: TGCCACCCAGAGTGGCTTCCATCTCAGCACTCTGTG...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCAAGTGGGTGTCATACCTaGCCTAGACCAGTGCCCATA +
Preference number: 4 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPSGCHT*PRPVPI
Trigger: TATGGGCACTGGTCTAGGCCAGGTATGACACCCACT...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGGGCAAAGGCACACATaGTGCCCCCTTCTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLGQRHT*CPLLRV
Trigger: CACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCC...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTATCCTCAGAACAAAGCTaGGCAGGGCCGAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLSSEQS*AGPRAS
Trigger: GCTGGCTCTCGGCCCTGCCCAGCTTTGTTCTGAGGA...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTTTTAGGTGCAGATGCTaGTTTCGGATGCCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: GHVGKGTHGAPFSGCSRLFRCRC*FRMPRN
Trigger: ATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAA...AAGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CGGGGTGCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGTTTAGGTGCAGATGCTaGTTTCGGATGCCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: RGAAEGCPVLVLLTERIGFRCRC*FRMPRN
Trigger: ATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAA...CCCAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTTCAGCTGCACCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp TGCTGTTTTGACGTAAGCATTGGTAGTCCCTTACCTGCCGGAAGGGATCTTTTGGGTAGTCCTGGAAGATaGGCACTGCACACGCCGGGG +
Preference number: 4 (lower is better)
Translates to: CCFDVSIGSPLPAGRDLLGSPGR*ALHTPG
Trigger: CCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACC...CAAAAGATCCCTTCCGGCAGGTAAGGGACTACCAATGCTTACGTCAAAACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCCAATGCTGCCACACATaGGACTGTCCCTCTCACTGC +
Preference number: 4 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSQCCHT*DCPSHC
Trigger: GCAGTGAGAGGGACAGTCCCATGTGTGGCAGCATTG...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGCAGGAAACCAGGAGATaGTCCTCTCGGAAAACTCCG +
Preference number: 4 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKQETRR*SSRKTP
Trigger: CGGAGTTTTCCGAGAGGACCATCTCCTGGTTTCCTG...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp CTCCGCTCCTCTAGGATGAGCCCACTCCTGGCATCTGAAGTGGGACAATGCTGCCCCTTTCAACTCAACTaGATCAAACGAGCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: LRSSRMSPLLASEVGQCCPFQLN*IKRAKD
Trigger: GTCCTTGGCTCGTTTGATCCAGTTGAGTTGAAAGGG...GCAGCATTGTCCCACTTCAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AACAGGGCCACCCCTTCCGTGCAAAGCCCTGCTGCAGCTCTGGACAGCCCCCAAAAAAGGGCTCTCACCTaGTCTGTATACAAAAGTCTA +
Preference number: 4 (lower is better)
Translates to: NRATPSVQSPAAALDSPQKRALT*SVYKSL
Trigger: TAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTT...TTGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCCTGTT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AGTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCCCACAGGGAGTGTGCTaGGGAGGAGCCTGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: SVYDDTPPAAASWNITSFPQGVC*GGAWSG
Trigger: GCCAGACCAGGCTCCTCCCCAGCACACTCCCTGTGG...GAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR CCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCATAGCCCCAAGCAGGTaGCAGCAAGGACCAAGTGTC +
Preference number: 4 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSIAPSR*QQGPSV
Trigger: GACACTTGGTCCTTGCTGCCACCTGCTTGGGGCTAT...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAATGACTGCTAAAAGCACGTaGCCCTTCAGGGTGACCTGT +
Preference number: 4 (lower is better)
Translates to: GQVAAAPNSRPALVKGKMTAKST*PFRVTC
Trigger: ACAGGTCACCCTGAAGGGCCACGTGCTTTTAGCAGT...CATTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AAACCAGGAGATGGTCCTCTCGGAAAACTCCGCTCCTCTAGGATGAGCCCACTCCGGAGAAGCCATTTGTaGAGGTGGCACATTCACCTG +
Preference number: 4 (lower is better)
Translates to: KPGDGPLGKLRSSRMSPLRRSHL*RWHIHL
Trigger: CAGGTGAATGTGCCACCTCCACAAATGGCTTCTCCG...GAGTGGGCTCATCCTAGAGGAGCGGAGTTTTCCGAGAGGACCATCTCCTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TTACTCACACTGCAGCGTGGGCAGCTAAATGGCCTTCATACCAATGCCATGGTTCCTTCCTGGGGACCATaGCAGAGACCTGGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LLTLQRGQLNGLHTNAMVPSWGP*QRPGQK
Trigger: CTTCTGGCCAGGTCTCTGCCATGGTCCCCAGGAAGG...AACCATGGCATTGGTATGAAGGCCATTTAGCTGCCCACGCTGCAGTGTGAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp GACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATATACAAGCTCCCCTGACTCATaGGCAGGCCTCGACCCCGCT +
Preference number: 4 (lower is better)
Translates to: DPATLASCITLNQSLRYTSSPDS*AGLDPA
Trigger: AGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCT...TGTATATCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
3UTR CAA 72 bp CAAAGACTCTGCAGCAATGCCAGCCTCCTTGGCTACTaGAGGGTTGAGATGAAGCTGGTCCCCCACATAGAG +
Preference number: 4 (lower is better)
Translates to: QRLCSNASLLGY*RVEMKLVPHIE
Trigger: CTCTATGTGGGGGACCAGCTTCATCTCAACCCTCAAGTAGCCAAGGAGGCTGGCATTGCTGCAGAGTCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR TCA 90 bp CTTCTTCCCAGCCCTGCAGTCATTGCAGAACCAGCTGCCGTCAGGCATCTCGATCCATTTTCTTCTGACTaGGACACATCAGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: LLPSPAVIAEPAAVRHLDPFSSD*DTSAAL
Trigger: CAGTGCTGCTGATGTGTCTCAGTCAGAAGAAAATGG...ATCGAGATGCCTGACGGCAGCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCACCATTTTCTTCTGACTaGGACACATCAGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: CGDTARPVPRTTFQVRASPFSSD*DTSAAL
Trigger: CAGTGCTGCTGATGTGTCTCAGTCAGAAGAAAATGG...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAACCATTTTCTTCTGACTaGGACACATCAGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: LRARKGATRRRVSSDPWEPFSSD*DTSAAL
Trigger: CAGTGCTGCTGATGTGTCTCAGTCAGAAGAAAATGG...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCTCCCCTGACTTGTCCATTTTCTTCTaGCTGAGACACATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VFSRSGQLPRPGRLSSPDLSIFF*LRHISS
Trigger: GCTGCTGATGTGTCTCAGTCAGAAGAAAATGGACAA...GTCAGGGGAGCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR TCA 90 bp GGTGACTCTCCAGGGTCTCTGCAGAGCTACACAGTTTGGCCCTCCGCCTTCTCTTTGTCCATTTTCTTCTaGCTGAGACACATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GDSPGSLQSYTVWPSAFSLSIFF*LRHISS
Trigger: GCTGCTGATGTGTCTCAGTCAGAAGAAAATGGACAA...AGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTGCAGAGACCCTGGAGAGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR TCA 90 bp AAACCAGGAGATGGTCCTCTCGGAAAACTCCGCTCCTCTAGGATGAGCCCACTCCCACATAGAGAAAGGTaGACTTGGCTTTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: KPGDGPLGKLRSSRMSPLPHRER*TWLSAP
Trigger: AGGAGCGGAAAGCCAAGTTCACCTTTCTCTATGTGG...GAGTGGGCTCATCCTAGAGGAGCGGAGTTTTCCGAGAGGACCATCTCCTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGATTCTTCACTGACTCCTaGGGATTCTGCCATTTCTCC +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRFFTDS*GFCHFS
Trigger: GGAGAAATGGCAGAATCCTCAGGAGTCAGTGAAGAA...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp AATGATCACAATGGCAGTTTCGAGGAATCCAGGGTCAGTCCTCACACGGGCCTCCAGCAGCTTCTTCACTaGCTCCTGAGGATTCTGCCA +
Preference number: 4 (lower is better)
Translates to: NDHNGSFEESRVSPHTGLQQLLH*LLRILP
Trigger: TGGCAGAATCCTCAGGAGTCAGTGAAGAAGCTGCTG...GAGGCCCGTGTGAGGACTGACCCTGGATTCCTCGAAACTGCCATTGTGATCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp TCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGGCAGAGGTGGCAAAATGAAGCAGCAGCTTCTTCACTaGCTCCTGAGGATTCTGCCA +
Preference number: 4 (lower is better)
Translates to: SRPGAPYRTNWGRGGKMKQQLLH*LLRILP
Trigger: TGGCAGAATCCTCAGGAGTCAGTGAAGAAGCTGCTG...CTTCATTTTGCCACCTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGACGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAGCCTCTGCCGTCTTTTaGGGAGTACTCTTCCCTATG +
Preference number: 4 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRASAVF*GVLFPM
Trigger: CATAGGGAAGAGTACTCCTCAAAAGACGGCAGAGGC...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CTCCCGGGCTGTCCGAGACCTCATTCTCAGTTAAGGATGCAGAAGGAGATGAACGCCTCTGCCGTCTTTTaGGGAGTACTCTTCCCTATG +
Preference number: 4 (lower is better)
Translates to: LPGCPRPHSQLRMQKEMNASAVF*GVLFPM
Trigger: CATAGGGAAGAGTACTCCTCAAAAGACGGCAGAGGC...GTTCATCTCCTTCTGCATCCTTAACTGAGAATGAGGTCTCGGACAGCCCGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511904.1
CDS-3UTR TCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCTTCAATCTCCTCACCTaGAGCATCTGGGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLFNLLT*SIWVLS
Trigger: GCTGAGCACCCAGATGCTTCAGGTGAGGAGATTGAA...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp AGGTCTCGACCACCACTGAGTTGGTTTGAGTCCCTGCAGAAAATCCCACTCGGAGACTCCACTGTGACCTaGGCAGCTCTTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: RSRPPLSWFESLQKIPLGDSTVT*AALQSP
Trigger: AGGAGATTGAAGAGCTGCTCAGGTCACAGTGGAGTC...TCCGAGTGGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCGAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp CTCCCGGGCTGTCCGAGACCTCATTCTCAGTTAAGGATGCAGAAGGAGATGAACGACTCCACTGTGACCTaGGCAGCTCTTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: LPGCPRPHSQLRMQKEMNDSTVT*AALQSP
Trigger: AGGAGATTGAAGAGCTGCTCAGGTCACAGTGGAGTC...GTTCATCTCCTTCTGCATCCTTAACTGAGAATGAGGTCTCGGACAGCCCGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511904.1
CDS-3UTR TCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCCAGCAGACTCCACTGTaGCCTGAGCAGCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSQQTPL*PEQLFN
Trigger: ATTGAAGAGCTGCTCAGGTCACAGTGGAGTCTGCTG...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp AATTTTTGCATGAACACTGAGGAAAGGCCCAAAGATCCATCTAGAGCAGGTGGGTTGCTGCCTGGCTCTTaGGCGAGGAGGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: NFCMNTEERPKDPSRAGGLLPGS*ARRLPP
Trigger: TGGAGGCAGCCTCCTCGCTCAAGAGCCAGGCAGCAA...CCCACCTGCTCTAGATGGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCGGTTCAAATCCAACTTaGCTGGTGTGGGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSGSNPT*LVWAPT
Trigger: TGTGGGAGCCCACACCAGTCAAGTTGGATTTGAACC...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGAGACCTTCTCAGACTTTTTGGATaGGACAGATACTTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: CTFVWGLRGLVSRAVRDLLRLFG*DRYFSL
Trigger: CAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGAG...AAGGTCTCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312087.10
CDS-3UTR TCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGTTGGAGGCGATCACTaGGCATCCTGCTGCCAGACA +
Preference number: 4 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLVGGDH*ASCCQT
Trigger: TGTCTGGCAGCAGGATGCTCAGTGATCGCCTCCAAC...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACTTGCAGTGCGTTTTTaGAGACTCTTCCGATCCCTC +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLLAVRF*RLFRSL
Trigger: GAGGGATCGGAAGAGTCTTCAAAAACGCACTGCAAG...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGCTTGCAGTGCGTTTTTaGAGACTCTTCCGATCCCTC +
Preference number: 4 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGLAVRF*RLFRSL
Trigger: GAGGGATCGGAAGAGTCTTCAAAAACGCACTGCAAG...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp TGTGCTTGTATGGTGGGGGCTTGCGCTCGCTCTCCTGTGTTTCTCGGGCTTCCCGCACTTAGGGATTTCTaGAATATCCGCTGTGTAGAT +
Preference number: 4 (lower is better)
Translates to: CACMVGACARSPVFLGLPALRDF*NIRCVD
Trigger: ATCTACACAGCGGATATTTCAGAAATCCCTAAGTGC...GGGAAGCCCGAGAAACACAGGAGAGCGAGCGCAAGCCCCCACCATACAAGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACAAATTCTCCCTTTCTaGTGTCCCTCTTGGCGACCA +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLQILPF*CPSWRP
Trigger: TGGTCGCCAAGAGGGACATCAGAAAGGGAGAATTTG...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACCAAATTCTCCCTTTCTaGTGTCCCTCTTGGCGACCA +
Preference number: 4 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDQILPF*CPSWRP
Trigger: TGGTCGCCAAGAGGGACATCAGAAAGGGAGAATTTG...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGTCTCGTGTGCGTGCTTaGTTCTCGCCATGCACTCCT +
Preference number: 4 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSESRVRA*FSPCTP
Trigger: AGGAGTGCATGGCGAGAATCAAGCACGCACACGAGA...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp AATGATCACAATGGCAGTTTCGAGGAATCCAGGGTCAGTCCTCACACGGGCCTCGCATGTAGAAGTGGGTaGTGTCGTTCTCGTGTGCGT +
Preference number: 4 (lower is better)
Translates to: NDHNGSFEESRVSPHTGLACRSG*CRSRVR
Trigger: ACGCACACGAGAACGACATCACCCACTTCTACATGC...GAGGCCCGTGTGAGGACTGACCCTGGATTCCTCGAAACTGCCATTGTGATCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GTAGTTCCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTCCCAGCGAAGCACTCGTCCTCTaGCTGCCTCTTCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: VVPKFHPNDILEVQLLPSEALVL*LPLPFP
Trigger: GGGGAAGGGAAGAGGCAGTCAGAGGACGAGTGCTTC...GCTGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGGAACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp GATATCCTGGAAGTGCAGCTTCTTCCCAGCCCTGCAGTCATTGCAGAACCAGCTCCACACACGTCACAATaGTGCCAAGGACATTCCCAC +
Preference number: 4 (lower is better)
Translates to: DILEVQLLPSPAVIAEPAPHTSQ*CQGHSH
Trigger: GTGGGAATGTCCTTGGCATCATTGTGACGTGTGTGG...AGCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAGCTGCACTTCCAGGATATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp CATTGCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTGCAGAGGTGGCAAAATaGAGTCGAAGGTTTGCCACA +
Preference number: 4 (lower is better)
Translates to: HCCHHLQGQLLTRMEKKRAEVAK*SRRFAT
Trigger: TGTGGCAAACCTTCGACTTCATTTTGCCACCTCTGC...ACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATCGTCCGGGGTGCAGCTaGAGGCTGTCCCGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHRPGCS*RLSRPG
Trigger: ACCAGGACGGGACAGCCTTCAGCTGCACCCCGGACG...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGCAGTCTTGGTGCTTCTaGCCGATGCCGCCCCTAAGT +
Preference number: 4 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLQSWCF*PMPPLS
Trigger: ACTTAGGGGCGGCATCGGTCAGAAGCACCAAGACTG...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGGGTAACGCTGAGGAGTaGGGCTGTTTGTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSEGNAEE*GCLSRN
Trigger: GTTCCTGGACAAACAGCCTCACTCCTCAGCGTTACC...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CCATCTGTAGTTCCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTGAGTGGCGACGGCGCTaGGAGCCAGAAAGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: PSVVPKFHPNDILEVQLLEWRRR*EPERGQ
Trigger: TTGCCCCCTTTCTGGCTCTCAGCGCCGTCGCCACTC...AAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGGAACTACAGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAAGAAAAGAAGCGTTTCTaGGGAACAATTCACATTAGT +
Preference number: 4 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEEKKRF*GTIHIS
Trigger: ACTAATGTGAATTGTTCCTCAGAAACGCTTCTTTTC...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp AGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCAGACCCACAGAGTGCTaGGATGGAAGCCACTCTGGG +
Preference number: 4 (lower is better)
Translates to: RYFSLCFVCTFVWGLRGLRPTEC*DGSHSG
Trigger: CCCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCT...GAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR TCA 90 bp AGAGTGGGAGGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGGGCAGAGGGCACATGTaGTCAGCAGAGACTGCATCT +
Preference number: 4 (lower is better)
Translates to: RVGGNLDIRRNSSVAVTLGRGHM*SAETAS
Trigger: AGATGCAGTCTCTGCTGATCACATGTGCCCTCTGCC...CAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGGGCAGAGGGCACATGTaGTCAGCAGAGACTGCATCT +
Preference number: 4 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSEGRGHM*SAETAS
Trigger: AGATGCAGTCTCTGCTGATCACATGTGCCCTCTGCC...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGAGAAGTTAGAGTCTaGACTGGAAAGCACTACTCC +
Preference number: 4 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYGEVRV*TGKHYS
Trigger: GGAGTAGTGCTTTCCAGTTCAGACTCTAACTTCTCC...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAGGAGAAGTTAGAGTCTaGACTGGAAAGCACTACTCC +
Preference number: 4 (lower is better)
Translates to: LRARKGATRRRVSSDPWEGEVRV*TGKHYS
Trigger: GGAGTAGTGCTTTCCAGTTCAGACTCTAACTTCTCC...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CTTCTTCCCAGCCCTGCAGTCATTGCAGAACCAGCTGCCGTCAGGCATCTCGATAAAGCCTGGCTCCACTaGGTTATCAACGGGTATTGT +
Preference number: 4 (lower is better)
Translates to: LLPSPAVIAEPAAVRHLDKAWLH*VINGYC
Trigger: ACAATACCCGTTGATAACTCAGTGGAGCCAGGCTTT...ATCGAGATGCCTGACGGCAGCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACAGGTATGGTGAGGCTGTaGCACCCCGTGGACACAGCA +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTGMVRL*HPVDTA
Trigger: TGCTGTGTCCACGGGGTGTCACAGCCTCACCATACC...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACACTCAACAGGGTATGGTaGGGCTGTGACACCCCGTGG +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTLNRVW*GCDTPW
Trigger: CCACGGGGTGTCACAGCCTCACCATACCCTGTTGAG...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GTAGTTCCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTCCCAGCCTCAACAGGGTATGGTaGGGCTGTGACACCCCGTGG +
Preference number: 4 (lower is better)
Translates to: VVPKFHPNDILEVQLLPSLNRVW*GCDTPW
Trigger: CCACGGGGTGTCACAGCCTCACCATACCCTGTTGAG...GCTGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGGAACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp GTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCTTTGTATTTAATTTCTaGCGGGGCATTTCACACCTC +
Preference number: 4 (lower is better)
Translates to: VSSALSYGDSEGSSPGLSFVFNF*RGISHL
Trigger: GAGGTGTGAAATGCCCCGTCAGAAATTAAATACAAA...GGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR TCA 90 bp CTCCGCTCCTCTAGGATGAGCCCACTCCTGGCATCTGAAGTGGGACAATGCTGCCCGACATTAAGACAATaGAACATGAGGGCTGATGCT +
Preference number: 4 (lower is better)
Translates to: LRSSRMSPLLASEVGQCCPTLRQ*NMRADA
Trigger: AGCATCAGCCCTCATGTTTCATTGTCTTAATGTCGG...GCAGCATTGTCCCACTTCAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCATCTATCAGTTATGGGCTACCCACTCCTGGCATCTaGAGTGGGACAATGCTGCCA +
Preference number: 4 (lower is better)
Translates to: EGAPMRWLTSNASISYGLPTPGI*SGTMLP
Trigger: TGGCAGCATTGTCCCACTTCAGATGCCAGGAGTGGG...TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp AAACCAGGAGATGGTCCTCTCGGAAAACTCCGCTCCTCTAGGATGAGCCCACTCACGTCTCCAGCTACATaGGACTCTCCAAATGCCCAT +
Preference number: 4 (lower is better)
Translates to: KPGDGPLGKLRSSRMSPLTSPAT*DSPNAH
Trigger: ATGGGCATTTGGAGAGTCTCATGTAGCTGGAGACGT...GAGTGGGCTCATCCTAGAGGAGCGGAGTTTTCCGAGAGGACCATCTCCTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCATCTATCAGTTATGGGCTACAGGCCCAGACGCAGTaGCTGATGTCAGCCATCAGA +
Preference number: 4 (lower is better)
Translates to: EGAPMRWLTSNASISYGLQAQTQ*LMSAIR
Trigger: TCTGATGGCTGACATCAGTCACTGCGTCTGGGCCTG...TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCTCCACTGGCACAGTGCTaGGCAAACCCCCATCAGCCG +
Preference number: 4 (lower is better)
Translates to: VCTMIRHLQQHPGILHHSPLAQC*ANPHQP
Trigger: CGGCTGATGGGGGTTTGCTCAGCACTGTGCCAGTGG...AGAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR TCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGATGAGGCTCATTTCCTaGTCAGGGTCTGGGACCCAC +
Preference number: 4 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKMRLIS*SGSGTH
Trigger: GTGGGTCCCAGACCCTGATCAGGAAATGAGCCTCAT...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TTCATCTATGTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCCATCTGCACTGGCAGTaGGCACCAATGCTGCGCTTA +
Preference number: 4 (lower is better)
Translates to: FIYVFSRSGQLPRPGRLSHLHWQ*APMLRL
Trigger: TAAGCGCAGCATTGGTGCTCACTGCCAGTGCAGATG...GCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGACATAGATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp AGCAGCCCCAGTCCCACCATCCGTGAACAGGTCTCGACCACCACTGAGTTGGTTGACCCATGTCTACAATaGGAAAAACAGCATCACGGA +
Preference number: 4 (lower is better)
Translates to: SSPSPTIREQVSTTTELVDPCLQ*EKQHHG
Trigger: TCCGTGATGCTGTTTTTCTCATTGTAGACATGGGTC...AACCAACTCAGTGGTGGTCGAGACCTGTTCACGGATGGTGGGACTGGGGCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp GTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCTCCCCTGACGACCCATGTCTACAATaGGAAAAACAGCATCACGGA +
Preference number: 4 (lower is better)
Translates to: VFSRSGQLPRPGRLSSPDDPCLQ*EKQHHG
Trigger: TCCGTGATGCTGTTTTTCTCATTGTAGACATGGGTC...GTCAGGGGAGCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp TTCATCTATGTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCGGTCATGGATGCTGCTaGATCTCCTGCAACGCACAG +
Preference number: 4 (lower is better)
Translates to: FIYVFSRSGQLPRPGRLSGHGCC*ISCNAQ
Trigger: CTGTGCGTTGCAGGAGATGCAGCAGCATCCATGACC...GCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGACATAGATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420906.6
CDS-3UTR GCA 90 bp AACTGTAAAGCAGCCCCAGTCCCACCATCCGTGAACAGGTCTCGACCACCACTGGCCGAGGATTTCTGGTaGCTGCTTCATCTTTATGCA +
Preference number: 4 (lower is better)
Translates to: NCKAAPVPPSVNRSRPPLAEDFW*LLHLYA
Trigger: TGCATAAAGATGAAGCAGGCACCAGAAATCCTCGGC...CAGTGGTGGTCGAGACCTGTTCACGGATGGTGGGACTGGGGCTGCTTTACAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp GGCTTCCCTCTGAAGCTTAATTTCACGAAAACGAGCTTCAGCTTCTTGCAGTGCTGCATGACCCCCTCCTaGAGGCTACTGGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GFPLKLNFTKTSFSFLQCCMTPS*RLLESW
Trigger: CCAGCTCTCCAGTAGCCTGCAGGAGGGGGTCATGCA...GCACTGCAAGAAGCTGAAGCTCGTTTTCGTGAAATTAAGCTTCAGAGGGAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp CGACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATATACTGCATGACCCCCTCCTaGAGGCTACTGGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RPRYTGLMHYSKSKPSIYCMTPS*RLLESW
Trigger: CCAGCTCTCCAGTAGCCTGCAGGAGGGGGTCATGCA...GTATATCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp TTCATCTATGTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCTGGCCGTTAAACTTCTaGATGACCCCCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: FIYVFSRSGQLPRPGRLSWPLNF*MTPSCR
Trigger: CCTGCAGGAGGGGGTCATGCAGAAGTTTAACGGCCA...GCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGACATAGATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp CTGAGCATTACTCACACTGCAGCGTGGGCAGCTAAATGGCCTTCATACCAATGCTGGCCGTTAAACTTCTaGATGACCCCCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LSITHTAAWAAKWPSYQCWPLNF*MTPSCR
Trigger: CCTGCAGGAGGGGGTCATGCAGAAGTTTAACGGCCA...GCATTGGTATGAAGGCCATTTAGCTGCCCACGCTGCAGTGTGAGTAATGCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGTGGCCGTTAAACTTCTaGATGACCCCCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKWPLNF*MTPSCR
Trigger: CCTGCAGGAGGGGGTCATGCAGAAGTTTAACGGCCA...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GGCCTCGACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGACTTAGACACAAGAGCTaGTTCGACAAGGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: GLDPATLASCITLNQSLRLRHKS*FDKALL
Trigger: GAGCAGGGCCTTGTCGAAGCAGCTCTTGTGTCTAAG...TCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTCGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGTACGTGATACTGGCGTaGACTCTTTTTCTGACCTTT +
Preference number: 4 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWYVILA*TLFLTF
Trigger: AAAGGTCAGAAAAAGAGTGCACGCCAGTATCACGTA...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTAAAGACTCTGCAGCAATaGCAGCCTCCTTGGCTACTT +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLKTLQQ*QPPWLL
Trigger: AAGTAGCCAAGGAGGCTGGCATTGCTGCAGAGTCTT...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGTTCTCCCAAAGACTCTaGAGCAATGCCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWFSQRL*SNASLL
Trigger: AAGGAGGCTGGCATTGCTGCAGAGTCTTTGGGAGAA...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACTTCTCCCAAAGACTCTaGAGCAATGCCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDFSQRL*SNASLL
Trigger: AAGGAGGCTGGCATTGCTGCAGAGTCTTTGGGAGAA...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGTTCTCTTCATGGGAATaGACTCTTCTCTCACAGACT +
Preference number: 4 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWFSSWE*TLLSQT
Trigger: AGTCTGTGAGAGAAGAGTGCATTCCCATGAAGAGAA...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGATCTGGGGTCAGCCTCTaGCGTCTTTTGAGGAGTACT +
Preference number: 4 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRSGVSL*RLLRST
Trigger: AGTACTCCTCAAAAGACGGCAGAGGCTGACCCCAGA...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCCTGCATCTCCCTTCCTaGTTCGTGGCATGGAGACTG +
Preference number: 4 (lower is better)
Translates to: YFSLCFVCTFVWGLRGLVLHLPS*FVAWRL
Trigger: CAGTCTCCATGCCACGAAGCAGGAAGGGAGATGCAG...GACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR GCA 90 bp AGAGTGGGAGGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGCTGCATCTCCCTTCCTaGTTCGTGGCATGGAGACTG +
Preference number: 4 (lower is better)
Translates to: RVGGNLDIRRNSSVAVTLLHLPS*FVAWRL
Trigger: CAGTCTCCATGCCACGAAGCAGGAAGGGAGATGCAG...CAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CTGAGCATTACTCACACTGCAGCGTGGGCAGCTAAATGGCCTTCATACCAATGCCTGCATCTCCCTTCCTaGTTCGTGGCATGGAGACTG +
Preference number: 4 (lower is better)
Translates to: LSITHTAAWAAKWPSYQCLHLPS*FVAWRL
Trigger: CAGTCTCCATGCCACGAAGCAGGAAGGGAGATGCAG...GCATTGGTATGAAGGCCATTTAGCTGCCCACGCTGCAGTGTGAGTAATGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp TTCATCTATGTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCCTGCATCTCCCTTCCTaGTTCGTGGCATGGAGACTG +
Preference number: 4 (lower is better)
Translates to: FIYVFSRSGQLPRPGRLSLHLPS*FVAWRL
Trigger: CAGTCTCCATGCCACGAAGCAGGAAGGGAGATGCAG...GCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGACATAGATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp CATTGCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTGACCAAAAACTGGGATaGTGCATCTCCCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: HCCHHLQGQLLTRMEKKRDQKLG*CISLPA
Trigger: AGCAGGAAGGGAGATGCAGCATCCCAGTTTTTGGTC...ACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCAGACCAAAAACTGGGATaGTGCATCTCCCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPDQKLG*CISLPA
Trigger: AGCAGGAAGGGAGATGCAGCATCCCAGTTTTTGGTC...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CATTGCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTCTTGGTGTTGTAGCGTaGTCTCTGCTTCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: HCCHHLQGQLLTRMEKKRLGVVA*SLLLTQ
Trigger: CTGAGTGAGAAGCAGAGAGCACGCTACAACACCAAG...ACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACTGGTGTGGGCTCCCACCTTGGTGTTGTAGCGTaGTCTCTGCTTCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: VQYRAAGFKSNLTGVGSHLGVVA*SLLLTQ
Trigger: CTGAGTGAGAAGCAGAGAGCACGCTACAACACCAAG...GTGGGAGCCCACACCAGTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000678714.1
CDS-3UTR GCA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACCTCTTCCGAAGACTGTaGTTGTCCGTCCTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDLFRRL*LSVLSL
Trigger: AAGACTCAGGACGGACAAGCACAGTCTTCGGAAGAG...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TTCATCTATGTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCCTTGAGCGAGGAGGCTaGCTCCATGGCCTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: FIYVFSRSGQLPRPGRLSLERGG*LHGLVR
Trigger: TCTTACAAGGCCATGGAGGCAGCCTCCTCGCTCAAG...GCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGACATAGATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGCTTCAGTGGTTTACATaGATCAGACAGATTTTTCGT +
Preference number: 4 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKLQWFT*IRQIFR
Trigger: ACGAAAAATCTGTCTGATGCATGTAAACCACTGAAG...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGACATTGCAGAACCAGCTaGCGTCAGGCATCTCGATGT +
Preference number: 4 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRHCRTS*RQASRC
Trigger: ACATCGAGATGCCTGACGGCAGCTGGTTCTGCAATG...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGCAGCCCTGCAGTCATTaGAGAACCAGCTGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLQPCSH*RTSCRQ
Trigger: CTGACGGCAGCTGGTTCTGCAATGACTGCAGGGCTG...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGATGATATCCTGGAAGTaGAGCTTCTTCCCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWMISWK*SFFPAL
Trigger: CAGGGCTGGGAAGAAGCTGCACTTCCAGGATATCAT...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGATGATATCCTGGAAGTaGAGCTTCTTCCCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGMISWK*SFFPAL
Trigger: CAGGGCTGGGAAGAAGCTGCACTTCCAGGATATCAT...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCTCGTTCTCGTGTGCGTaGTTGATTCTCGCCATGCAC +
Preference number: 4 (lower is better)
Translates to: LQFVFRLHFRMGTPRARLSFSCA*LILAMH
Trigger: GTGCATGGCGAGAATCAAGCACGCACACGAGAACGA...GAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCATCACACAGCACCAGCTaGCCGCCATCACCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSSHSTS*PPSPQR
Trigger: CCGCTGCGGTGATGGCGGGCAGCTGGTGCTGTGTGA...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CATGCACTCCTCCTCGTCGATCAGCTCCCCAACGTACTCGTTAACAAATTCTCCCCTTGGTGCAGAACTTaGGGTCACACAGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: HALLLVDQLPNVLVNKFSPWCRT*GHTAPA
Trigger: AGCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGG...GGAGAATTTGTTAACGAGTACGTTGGGGAGCTGATCGACGAGGAGGAGTGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp AATGATCACAATGGCAGTTTCGAGGAATCCAGGGTCAGTCCTCACACGGGCCTCATCTTACAACACCATTaGTGCCACCACCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: NDHNGSFEESRVSPHTGLILQHH*CHHLQG
Trigger: GCCCTGCAGGTGGTGGCAGCAATGGTGTTGTAAGAT...GAGGCCCGTGTGAGGACTGACCCTGGATTCCTCGAAACTGCCATTGTGATCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGAGTTGTCACTTCCTGTaGTCTAAGCAGACTGCGGTC +
Preference number: 4 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGSCHFL*SKQTAV
Trigger: GACCGCAGTCTGCTTAGAGCACAGGAAGTGACAACT...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGAAACTTCCAGTCAGTaGTCAGGGAGGCGTGGGACC +
Preference number: 4 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLETSSQ*SGRRGT
Trigger: GGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACACATTTCAGAGGAGAGAAACTTCCAGTCAGTaGTCAGGGAGGCGTGGGACC +
Preference number: 4 (lower is better)
Translates to: DEFLATLGKSLRYTFQRRETSSQ*SGRRGT
Trigger: GGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC...TCTCCTCTGAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTCTGCAAAGCCGATTCTaGTGTTTTGACGTAAGCATT +
Preference number: 4 (lower is better)
Translates to: GHVGKGTHGAPFSGCSRLLQSRF*CFDVSI
Trigger: AATGCTTACGTCAAAACAGCAGAATCGGCTTTGCAG...AAGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTCTGCAAAGCCGATTCTaGTGTTTTGACGTAAGCATT +
Preference number: 4 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTLQSRF*CFDVSI
Trigger: AATGCTTACGTCAAAACAGCAGAATCGGCTTTGCAG...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGATCTGCTCCCCAAAGTaGACTGCAAAGCCGATTCTG +
Preference number: 4 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWICSPK*TAKPIL
Trigger: CAGAATCGGCTTTGCAGTGCACTTTGGGGAGCAGAT...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGATCTGCTCCCCAAAGTaGACTGCAAAGCCGATTCTG +
Preference number: 4 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGICSPK*TAKPIL
Trigger: CAGAATCGGCTTTGCAGTGCACTTTGGGGAGCAGAT...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGATGCTGGTTTCGGATaGCAAGGAATCCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: SVCVSSALSYGDSEGSSPDAGFG*QGILRD
Trigger: ATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATC...GGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACGATGCTGGTTTCGGATaGCAAGGAATCCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDDAGFG*QGILRD
Trigger: ATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATC...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GATATCCTGGAAGTGCAGCTTCTTCCCAGCCCTGCAGTCATTGCAGAACCAGCTGGGTTTAGGTGCAGATaGTGGTTTCGGATGCCAAGG +
Preference number: 4 (lower is better)
Translates to: DILEVQLLPSPAVIAEPAGFRCR*WFRMPR
Trigger: CCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC...AGCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAGCTGCACTTCCAGGATATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp AATGATCACAATGGCAGTTTCGAGGAATCCAGGGTCAGTCCTCACACGGGCCTCGGGTTTAGGTGCAGATaGTGGTTTCGGATGCCAAGG +
Preference number: 4 (lower is better)
Translates to: NDHNGSFEESRVSPHTGLGFRCR*WFRMPR
Trigger: CCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC...GAGGCCCGTGTGAGGACTGACCCTGGATTCCTCGAAACTGCCATTGTGATCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCAGGGTATGGGTTTAGGTaGAGATGCTGGTTTCGGATG +
Preference number: 4 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPGYGFR*RCWFRM
Trigger: CATCCGAAACCAGCATCTGCACCTAAACCCATACCC...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGGCAGAGGTGGCAAAATGAAGGGTTCTCACTTCAGGTaGCTGAAGAGTTTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: SRPGAPYRTNWGRGGKMKGSHFR*LKSFPH
Trigger: GTGGGGGAAACTCTTCAGGCACCTGAAGTGAGAACC...CTTCATTTTGCCACCTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGACGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp AGAGTGGGAGGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAAGACAGACAAACACTaGGAAGGGGACCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: RVGGNLDIRRNSSVAVTLKTDKH*EGDPAS
Trigger: GCTGGCTGGGTCCCCTTCGCAGTGTTTGTCTGTCTT...CAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGCTGGAAGATGGGCACTaGACACGCCGGGGTTTAGAT +
Preference number: 4 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSELEDGH*TRRGLD
Trigger: ATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAG...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGTATTTCATCCTCGCATaGATAATGCAGTCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWYFILA*IMQSRG
Trigger: TCCTCTTGACTGCATTATGCATGCGAGGATGAAATA...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCACTGATGCCAATGTCATaGTGCTCTTTGGACACCATT +
Preference number: 4 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPLMPMS*CSLDTI
Trigger: AATGGTGTCCAAAGAGCAGCATGACATTGGCATCAG...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGGACTGTCCCTCTCACTaGAGAGTGCTGAGTTCACTT +
Preference number: 4 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKDCPSH*RVLSSL
Trigger: AAGTGAACTCAGCACTCTGCAGTGAGAGGGACAGTC...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AAACCAGGAGATGGTCCTCTCGGAAAACTCCGCTCCTCTAGGATGAGCCCACTCGACTGTCCCTCTCACTaGAGAGTGCTGAGTTCACTT +
Preference number: 4 (lower is better)
Translates to: KPGDGPLGKLRSSRMSPLDCPSH*RVLSSL
Trigger: AAGTGAACTCAGCACTCTGCAGTGAGAGGGACAGTC...GAGTGGGCTCATCCTAGAGGAGCGGAGTTTTCCGAGAGGACCATCTCCTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCGATTGTGCCACTTACTaGACTCCAGCCTGGCCAACA +
Preference number: 4 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSDCATY*TPAWPT
Trigger: TGTTGGCCAGGCTGGAGTGCAGTAAGTGGCACAATC...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp CACAGGAGCAGCAAGCTTGCTCCTGACAGCATGGCTCTCACACAGCATCCTCCCCCTGGATGGTCAGCATaGTTCAAAATATTACCCGAG +
Preference number: 4 (lower is better)
Translates to: HRSSKLAPDSMALTQHPPPGWSA*FKILPE
Trigger: CTCGGGTAATATTTTGAAGCATGCTGACCATCCAGG...GGGAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAATGAGGCTGTGCACTGTCTaGGAAGGACTTGAGGACAAT +
Preference number: 4 (lower is better)
Translates to: GQVAAAPNSRPALVKGKMRLCTV*EGLEDN
Trigger: ATTGTCCTCAAGTCCTTCGCAGACAGTGCACAGCCT...CATTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TTCAGTGGTTTACATGCATCAGACAGATTTTTCGTTGCTGCCTGGCTCTTGAGCCGTCCACCACAGCCATaGTGCGGCACTGAGCTCCGA +
Preference number: 4 (lower is better)
Translates to: FSGLHASDRFFVAAWLLSRPPQP*CGTELR
Trigger: TCGGAGCTCAGTGCCGCAGCATGGCTGTGGTGGACG...GCTCAAGAGCCAGGCAGCAACGAAAAATCTGTCTGATGCATGTAAACCACTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR GCA 90 bp GGCTTCCCTCTGAAGCTTAATTTCACGAAAACGAGCTTCAGCTTCTTGCAGTGCGCAGTGAGCTGTGACTaGACTGCACTCCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GFPLKLNFTKTSFSFLQCAVSCD*TALQPG
Trigger: CCCAGGCTGGAGTGCAGTGCAGTCACAGCTCACTGC...GCACTGCAAGAAGCTGAAGCTCGTTTTCGTGAAATTAAGCTTCAGAGGGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677559.1
CDS-3UTR CCA 90 bp CATTGCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTGCAATTCCAACACTTTaGGAGGACGAGGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: HCCHHLQGQLLTRMEKKRAIPTL*EDEAGR
Trigger: TCTACCTGCCTCGTCCTCCCAAAGTGTTGGAATTGC...ACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382895.7
CDS-3UTR CCA 90 bp GCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGGCAGAGACTGCCGAGGATTTCTaGTGCCTGCTTCATCTTTAT +
Preference number: 4 (lower is better)
Translates to: AAEGCPVLVLLTERIGAETAEDF*CLLHLY
Trigger: ATAAAGATGAAGCAGGCACCAGAAATCCTCGGCAGT...CTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTTCAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp CTGAGCATTACTCACACTGCAGCGTGGGCAGCTAAATGGCCTTCATACCAATGCTCGGAGTCTTCCCGTTaGCACTGCCGAGGATTTCTG +
Preference number: 4 (lower is better)
Translates to: LSITHTAAWAAKWPSYQCSESSR*HCRGFL
Trigger: CAGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGA...GCATTGGTATGAAGGCCATTTAGCTGCCCACGCTGCAGTGTGAGTAATGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp AGGTCTCGACCACCACTGAGTTGGTTTGAGTCCCTGCAGAAAATCCCACTCGGAAGGCTACTGGAGAGCTaGGCTTTGCTGAGGAACACA +
Preference number: 4 (lower is better)
Translates to: RSRPPLSWFESLQKIPLGRLLES*ALLRNT
Trigger: TGTGTTCCTCAGCAAAGCCCAGCTCTCCAGTAGCCT...TCCGAGTGGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCGAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGAAGGGCAGGGCGTCGTaGCCGTTAAACTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSEKGRAS*PLNFCM
Trigger: CATGCAGAAGTTTAACGGCCACGACGCCCTGCCCTT...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TTCATCTATGTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCAAGGGCAGGGCGTCGTaGCCGTTAAACTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: FIYVFSRSGQLPRPGRLSKGRAS*PLNFCM
Trigger: CATGCAGAAGTTTAACGGCCACGACGCCCTGCCCTT...GCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGACATAGATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp GGCCTCGACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATTTCAGCTTGTCGGCTaGAATAAAGGGCAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: GLDPATLASCITLNQSLRFQLVG*NKGQGV
Trigger: GACGCCCTGCCCTTTATTCCAGCCGACAAGCTGAAA...TCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTCGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp GATATCCTGGAAGTGCAGCTTCTTCCCAGCCCTGCAGTCATTGCAGAACCAGCTACTCAAAACGCAGTTTaGCATCGTGTGCGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: DILEVQLLPSPAVIAEPATQNAV*HRVRRV
Trigger: AACCCGGCGCACACGATGCCAAACTGCGTTTTGAGT...AGCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAGCTGCACTTCCAGGATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp GGCCTCGACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGAACTCAAAACGCAGTTTaGCATCGTGTGCGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: GLDPATLASCITLNQSLRTQNAV*HRVRRV
Trigger: AACCCGGCGCACACGATGCCAAACTGCGTTTTGAGT...TCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTCGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp GCTATCAGACAGGAGCCTCTCCAGCGAGGGGAATCCGTGGCTTTACAGCCCTCCATCCCTTTCATTTCCTaGGACTCAAAACGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: AIRQEPLQRGESVALQPSIPFIS*DSKRSL
Trigger: CAAACTGCGTTTTGAGTCCCAGGAAATGAAAGGGAT...GGAGGGCTGTAAAGCCACGGATTCCCCTCGCTGGAGAGGCTCCTGTCTGATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTGTCTCTTCCAGTGTTTaGACAAGACTCTTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTVSSSV*TRLFLS
Trigger: GCTAAGAAAGAGTCTTGTCCAAACACTGGAAGAGAC...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CCCTGCAGAAAATCCCACTCGGAGGAGTGGTCGCTGAGGATTCAGAGTGGCAAGGGTAACCCGACACTTTaGACCACACCAAATCACCAA +
Preference number: 4 (lower is better)
Translates to: PCRKSHSEEWSLRIQSGKGNPTL*TTPNHQ
Trigger: TTGGTGATTTGGTGTGGTCCAAAGTGTCGGGTTACC...CTTGCCACTCTGAATCCTCAGCGACCACTCCTCCGAGTGGGATTTTCTGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp GGTGACTCTCCAGGGTCTCTGCAGAGCTACACAGTTTGGCCCTCCGCCTTCTCTATAGCTGTGAAGGAGTaGATCTGCAGAAACCATGCA +
Preference number: 4 (lower is better)
Translates to: GDSPGSLQSYTVWPSAFSIAVKE*ICRNHA
Trigger: TGCATGGTTTCTGCAGATCCACTCCTTCACAGCTAT...AGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTGCAGAGACCCTGGAGAGTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR CCA 90 bp TGGTGTCGCTTCCCCTTCCGAGCAGTGAAGTGGGCAGTGCAGATGATGCTGTTGTATCCAAGCTCTTTCTaGGGCGTCACCAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: WCRFPFRAVKWAVQMMLLYPSSF*GVTKEL
Trigger: CAGTTCTTTGGTGACGCCCCAGAAAGAGCTTGGATA...CAACAGCATCATCTGCACTGCCCACTTCACTGCTCGGAAGGGGAAGCGACACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCATCCGCCTTCTCTTCATaGGAATGCACTCTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: CGDTARPVPRTTFQVRASSAFSS*ECTLLS
Trigger: TGAGAGAAGAGTGCATTCCCATGAAGAGAAGGCGGA...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGATCCGCCTTCTCTTCATaGGAATGCACTCTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRSAFSS*ECTLLS
Trigger: TGAGAGAAGAGTGCATTCCCATGAAGAGAAGGCGGA...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCCAGAGCTACACAGTTTaGCCCTCCGCCTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLQSYTV*PSAFSS
Trigger: TGAAGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTG...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GGCCTCGACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGACAGAGCTACACAGTTTaGCCCTCCGCCTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: GLDPATLASCITLNQSLRQSYTV*PSAFSS
Trigger: TGAAGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTG...TCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTCGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp CCCAATGGGTGTGTGTCAGTGTGGACCTCAAACAGCAATTCTCATGGTCACCTAACCCTACTCCTCTTCTaGGGTCAGCCTCTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: PNGCVSVWTSNSNSHGHLTLLLF*GQPLPS
Trigger: AGACGGCAGAGGCTGACCCCAGAAGAGGAGTAGGGT...TAGGTGACCATGAGAATTGCTGTTTGAGGTCCACACTGACACACACCCATTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420906.6
CDS-3UTR CCA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGGTGGCATGGAGACTGTaGTCTTCTTCCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSEVAWRL*SSSSQE
Trigger: CTCCTGGGAGGAAGAAGACCACAGTCTCCATGCCAC...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AGGTCTCGACCACCACTGAGTTGGTTTGAGTCCCTGCAGAAAATCCCACTCGGATTTTTCGTTGCTGCCTaGCTCTTGAGCGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: RSRPPLSWFESLQKIPLGFFVAA*LLSEEA
Trigger: AGCCTCCTCGCTCAAGAGCCAGGCAGCAACGAAAAA...TCCGAGTGGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCGAGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGATTTCGCTTCTTCAGTaGTTTACATGCATCAGACAG +
Preference number: 4 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWISLLQ*FTCIRQ
Trigger: CTGTCTGATGCATGTAAACCACTGAAGAAGCGAAAT...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTGCACTTTCGTATaGGGACTCCGAGGGCTCGTC +
Preference number: 4 (lower is better)
Translates to: RYFSLCFVCTFVWGLRGLVCTFV*GLRGLV
Trigger: GACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGAC...GAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR CCA 90 bp GACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACACATTTCAGAGGAGAGTCTGCACTTTCGTATaGGGACTCCGAGGGCTCGTC +
Preference number: 4 (lower is better)
Translates to: DEFLATLGKSLRYTFQRRVCTFV*GLRGLV
Trigger: GACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGAC...TCTCCTCTGAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAACACATACTCCTTTTTaGCAGTCACTCCTCGCTCAG +
Preference number: 4 (lower is better)
Translates to: LRARKGATRRRVSSDPWETHTPF*QSLLAQ
Trigger: CTGAGCGAGGAGTGACTGCCAAAAAGGAGTATGTGT...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CAGGGCCGCATCAGTAAACACACACTTCAGTCGGTGGTGATTTGTGAAATAGGTGGTGAACCTCCCTTCTaGCCTCCGGGAAAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: QGRISKHTLQSVVICEIGGEPPF*PPGKPK
Trigger: CTTGGGCTTTCCCGGAGGCCAGAAGGGAGGTTCACC...ACCTATTTCACAAATCACCACCGACTGAAGTGTGTGTTTACTGATGCGGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGTTGGGTTTGAAGGGTTaGAAGCATGGCAGCTCACAC +
Preference number: 4 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGLGLKG*KHGSSH
Trigger: GTGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAA...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCTTCCGAGCAGTGAAGTaGGCAGTGCAGATGATGCTG +
Preference number: 4 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLFRAVK*AVQMML
Trigger: CAGCATCATCTGCACTGCCCACTTCACTGCTCGGAA...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGGGAATCCACTGCAATTaGAGGCTCCACACCGGCAGA +
Preference number: 4 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSEGIHCN*RLHTGR
Trigger: TCTGCCGGTGTGGAGCCTCCAATTGCAGTGGATTCC...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CATGCACTCCTCCTCGTCGATCAGCTCCCCAACGTACTCGTTAACAAATTCTCCACAGGTGGTAGGCCTTaGTGCAGAACTTGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: HALLLVDQLPNVLVNKFSTGGRP*CRTCGH
Trigger: GTGACCGCAAGTTCTGCACCAAGGCCTACCACCTGT...GGAGAATTTGTTAACGAGTACGTTGGGGAGCTGATCGACGAGGAGGAGTGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGAGCTTCTCACTAGGATaGAAAAGAAGCGTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWSFSLG*KRSVSE
Trigger: CTCAGAAACGCTTCTTTTCCATCCTAGTGAGAAGCT...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGAGATGGAAGCCACTCTaGGTGGCAGGAGAGCTAGAC +
Preference number: 4 (lower is better)
Translates to: NKVVLEDGHCTRRGLDVKRWKPL*VAGELD
Trigger: GTCTAGCTCTCCTGCCACCCAGAGTGGCTTCCATCT...CTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AATGATCACAATGGCAGTTTCGAGGAATCCAGGGTCAGTCCTCACACGGGCCTCAGTGGGTGTCATACCTaGCCTAGACCAGTGCCCATA +
Preference number: 4 (lower is better)
Translates to: NDHNGSFEESRVSPHTGLSGCHT*PRPVPI
Trigger: TATGGGCACTGGTCTAGGCCAGGTATGACACCCACT...GAGGCCCGTGTGAGGACTGACCCTGGATTCCTCGAAACTGCCATTGTGATCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TCCTCGTCGATCAGCTCCCCAACGTACTCGTTAACAAATTCTCCCTTTCTGATGGCCCCTCAGGACACGTaGGCAAAGGCACACATGGTG +
Preference number: 4 (lower is better)
Translates to: SSSISSPTYSLTNSPFLMAPQDT*AKAHMV
Trigger: CACCATGTGTGCCTTTGCCCACGTGTCCTGAGGGGC...CATCAGAAAGGGAGAATTTGTTAACGAGTACGTTGGGGAGCTGATCGACGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTAACAGCTCGTTTCCCCTaGGTCCTCTGTGTAGTTAAC +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLTARFP*VLCVVN
Trigger: GTTAACTACACAGAGGACCCAGGGGAAACGAGCTGT...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CATTGCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTACAGCTCGTTTCCCCTaGGTCCTCTGTGTAGTTAAC +
Preference number: 4 (lower is better)
Translates to: HCCHHLQGQLLTRMEKKRTARFP*VLCVVN
Trigger: GTTAACTACACAGAGGACCCAGGGGAAACGAGCTGT...ACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGCGCGAGCAAGTCAGTaGCTACACAGCTCGTTTCCC +
Preference number: 4 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLARASQ*LHSSFP
Trigger: GGGAAACGAGCTGTGTAGCCACTGACTTGCTCGCGC...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAATTTCTTAGGACACTTTaGGAGAAGTTAGAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEFLRTL*EKLESE
Trigger: TTCAGACTCTAACTTCTCCCAAAGTGTCCTAAGAAA...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GCTGCCCGGCTTCTCACACAGCTGGCACACATACTCCTTTTTGGCAGTCACTCCGGAATCCTGAGGGATTaGGGCGGTTTTTGTGTTTTG +
Preference number: 4 (lower is better)
Translates to: AARLLTQLAHILLFGSHSGILRD*GGFCVL
Trigger: CAAAACACAAAAACCGCCCCAATCCCTCAGGATTCC...GGAGTGACTGCCAAAAAGGAGTATGTGTGCCAGCTGTGTGAGAAGCCGGGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp CCATCTGTAGTTCCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTGGACCCAGCCAGCCATaGACGGGTGTCGCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: PSVVPKFHPNDILEVQLLGPSQP*TGVAGR
Trigger: TCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCC...AAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGGAACTACAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp AACAAATTCTCCCTTTCTGATGTCCCTCTTGGCGACCAGGCCCCACCCTTTGCCGGCTGTGACACCCCGTaGACACAGCATTTTACTCTA +
Preference number: 4 (lower is better)
Translates to: NKFSLSDVPLGDQAPPFAGCDTP*TQHFTL
Trigger: TAGAGTAAAATGCTGTGTCCACGGGGTGTCACAGCC...GGCAAAGGGTGGGGCCTGGTCGCCAAGAGGGACATCAGAAAGGGAGAATTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCAGGCTGTGACACCCCGTaGACACAGCATTTTACTCTA +
Preference number: 4 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPGCDTP*TQHFTL
Trigger: TAGAGTAAAATGCTGTGTCCACGGGGTGTCACAGCC...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTCTATTTTCCCCCAACTaGCAAGTCTCAACTCTCTAT +
Preference number: 4 (lower is better)
Translates to: GHVGKGTHGAPFSGCSRLLFSPN*QVSTLY
Trigger: ATAGAGAGTTGAGACTTGCCAGTTGGGGGAAAATAG...AAGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AAACCAGGAGATGGTCCTCTCGGAAAACTCCGCTCCTCTAGGATGAGCCCACTCGGAGCACCTATGCGCTaGCTGACTTCTAATGCATCT +
Preference number: 4 (lower is better)
Translates to: KPGDGPLGKLRSSRMSPLGAPMR*LTSNAS
Trigger: AGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCC...GAGTGGGCTCATCCTAGAGGAGCGGAGTTTTCCGAGAGGACCATCTCCTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCTTGCTGGGGAGGAGCCTaGTCTGGCCGACTGCAGACA +
Preference number: 4 (lower is better)
Translates to: VCTMIRHLQQHPGILHHSCWGGA*SGRLQT
Trigger: TGTCTGCAGTCGGCCAGACCAGGCTCCTCCCCAGCA...AGAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR CCA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGAAACTAGAAACTTCCTaGCTATCCCTAAATTCTAGG +
Preference number: 4 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKKLETS*LSLNSR
Trigger: CCTAGAATTTAGGGATAGCCAGGAAGTTTCTAGTTT...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp CACAGGAGCAGCAAGCTTGCTCCTGACAGCATGGCTCTCACACAGCATCCTCCCTTCCTGATCAGGGTCTaGGACCCACATACAGAATAT +
Preference number: 4 (lower is better)
Translates to: HRSSKLAPDSMALTQHPPFLIRV*DPHTEY
Trigger: ATATTCTGTATGTGGGTCCCAGACCCTGATCAGGAA...GGGAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp CTCCGCTCCTCTAGGATGAGCCCACTCCTGGCATCTGAAGTGGGACAATGCTGCTTCCTGATCAGGGTCTaGGACCCACATACAGAATAT +
Preference number: 4 (lower is better)
Translates to: LRSSRMSPLLASEVGQCCFLIRV*DPHTEY
Trigger: ATATTCTGTATGTGGGTCCCAGACCCTGATCAGGAA...GCAGCATTGTCCCACTTCAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp CCCTGCAGAAAATCCCACTCGGAGGAGTGGTCGCTGAGGATTCAGAGTGGCAAGCACTCCTCTAATGAGTaGAAACAACTGAGGCACACC +
Preference number: 4 (lower is better)
Translates to: PCRKSHSEEWSLRIQSGKHSSNE*KQLRHT
Trigger: GGTGTGCCTCAGTTGTTTCCACTCATTAGAGGAGTG...CTTGCCACTCTGAATCCTCAGCGACCACTCCTCCGAGTGGGATTTTCTGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp GCCCCGCCCAGGTTGCCTAGGTCCCTGACCTTCCTGCACTGGAAGGCCTACACTAAACAGCAATTCTCATaGTCACCTAACTCATATCAG +
Preference number: 4 (lower is better)
Translates to: APPRLPRSLTFLHWKAYTKQQFS*SPNSYQ
Trigger: CTGATATGAGTTAGGTGACCATGAGAATTGCTGTTT...AGTGTAGGCCTTCCAGTGCAGGAAGGTCAGGGACCTAGGCAACCTGGGCGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420906.6
CDS-3UTR CCA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGCAGGTCAGGACCACGTaGAGAGGACCGAGCCTTAGT +
Preference number: 4 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLQVRTT*RGPSLS
Trigger: ACTAAGGCTCGGTCCTCTCCACGTGGTCCTGACCTG...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677895.1
3UTR CAA 72 bp CCCGGCTTCTCACACAGCTGGCACACATACTCCTTTTaGGCAGTCACTCCTCGCTCAGACTTTTTGGATGAG +
Preference number: 4 (lower is better)
Translates to: PGFSHSWHTYSF*AVTPRSDFLDE
Trigger: CTCATCCAAAAAGTCTGAGCGAGGAGTGACTGCCAAAAAGGAGTATGTGTGCCAGCTGTGTGAGAAGCCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR CAA 72 bp ATCATTTTACCTTTTGACGGCCTTGGGTTTGAAGGGTaGGAAGCATGGCAGCTCACACAGCTGTGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: IILPFDGLGFEG*EAWQLTQLWRG
Trigger: CCCCCTCCACAGCTGTGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAAGGCCGTCAAAAGGTAAAATGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR CAA 72 bp AAGGCTGTCCCGTCCTGGTGCTCCTTACAGAACGAATaGGGGCAGAGGTGGCAAAATGAAGTCGAAGGTTTG +
Preference number: 4 (lower is better)
Translates to: KAVPSWCSLQNE*GQRWQNEVEGL
Trigger: CAAACCTTCGACTTCATTTTGCCACCTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
3UTR CAA 72 bp CTGCAGACAGCAGGCTGTGCACTGTCTGCGAAGGACTaGAGGACAATGACAAAACTGCCCACAATACACCTG +
Preference number: 4 (lower is better)
Translates to: LQTAGCALSAKD*RTMTKLPTIHL
Trigger: CAGGTGTATTGTGGGCAGTTTTGTCATTGTCCTCAAGTCCTTCGCAGACAGTGCACAGCCTGCTGTCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAATGCCATTTTCTTCTGACTaGGACACATCAGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: GQVAAAPNSRPALVKGKMPFSSD*DTSAAL
Trigger: CAGTGCTGCTGATGTGTCTCAGTCAGAAGAAAATGG...CATTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCCCAAAGAACTGTACGTaGTACTGGCGTGCACTCTTT +
Preference number: 4 (lower is better)
Translates to: SVCVSSALSYGDSEGSSPPKNCT*YWRALF
Trigger: AAAGAGTGCACGCCAGTATCACGTACAGTTCTTTGG...GGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR TCA 90 bp CATTGCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTCCAAAGAACTGTACGTaGTACTGGCGTGCACTCTTT +
Preference number: 4 (lower is better)
Translates to: HCCHHLQGQLLTRMEKKRPKNCT*YWRALF
Trigger: AAAGAGTGCACGCCAGTATCACGTACAGTTCTTTGG...ACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACTTCTTCACTGACTCCTaGGGATTCTGCCATTTCTCC +
Preference number: 4 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDFFTDS*GFCHFS
Trigger: GGAGAAATGGCAGAATCCTCAGGAGTCAGTGAAGAA...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp AAACCAGGAGATGGTCCTCTCGGAAAACTCCGCTCCTCTAGGATGAGCCCACTCTTCTTCACTGACTCCTaGGGATTCTGCCATTTCTCC +
Preference number: 4 (lower is better)
Translates to: KPGDGPLGKLRSSRMSPLFFTDS*GFCHFS
Trigger: GGAGAAATGGCAGAATCCTCAGGAGTCAGTGAAGAA...GAGTGGGCTCATCCTAGAGGAGCGGAGTTTTCCGAGAGGACCATCTCCTGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp CCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTCCCAGCCCTGCAGCCTCTGCCGTCTTTTaGGGAGTACTCTTCCCTATG +
Preference number: 4 (lower is better)
Translates to: PKFHPNDILEVQLLPSPAASAVF*GVLFPM
Trigger: CATAGGGAAGAGTACTCCTCAAAAGACGGCAGAGGC...TGCAGGGCTGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp AGAGTGGGAGGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGGCCTCTGCCGTCTTTTaGGGAGTACTCTTCCCTATG +
Preference number: 4 (lower is better)
Translates to: RVGGNLDIRRNSSVAVTLASAVF*GVLFPM
Trigger: CATAGGGAAGAGTACTCCTCAAAAGACGGCAGAGGC...CAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp ACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTTTCAATCTCCTCACCTaGAGCATCTGGGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: TSVCVSSALSYGDSEGSSFNLLT*SIWVLS
Trigger: GCTGAGCACCCAGATGCTTCAGGTGAGGAGATTGAA...AGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR TCA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGTTCAATCTCCTCACCTaGAGCATCTGGGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSEFNLLT*SIWVLS
Trigger: GCTGAGCACCCAGATGCTTCAGGTGAGGAGATTGAA...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGTTCAATCTCCTCACCTaGAGCATCTGGGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKFNLLT*SIWVLS
Trigger: GCTGAGCACCCAGATGCTTCAGGTGAGGAGATTGAA...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTATGGCCGTTTTGTCAGTaGTTGTGTCTCTCTTCCGAA +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLWPFCQ*LCLSSE
Trigger: TTCGGAAGAGAGACACAATCACTGACAAAACGGCCA...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GAGCCTAGGTCTGGAAGCAACAGGAATCAGGTGTGGTGTGTGAGTCGCCTTCCATGGCCGTTTTGTCAGTaGTTGTGTCTCTCTTCCGAA +
Preference number: 4 (lower is better)
Translates to: EPRSGSNRNQVWCVSRLPWPFCQ*LCLSSE
Trigger: TTCGGAAGAGAGACACAATCACTGACAAAACGGCCA...TGGAAGGCGACTCACACACCACACCTGATTCCTGTTGCTTCCAGACCTAGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACTGGCCGTTTTGTCAGTaGTTGTGTCTCTCTTCCGAA +
Preference number: 4 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDWPFCQ*LCLSSE
Trigger: TTCGGAAGAGAGACACAATCACTGACAAAACGGCCA...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGCTAAACCCAAGAGCTaGAGATGCTGCCGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLAKPKS*RCCRGS
Trigger: GCTTCCACGGCAGCATCTTCAGCTCTTGGGTTTAGC...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAATCTCGGGCTTCCCTCTaGAGCTTAATTTCACGAAAA +
Preference number: 4 (lower is better)
Translates to: LRARKGATRRRVSSDPWESRASL*SLISRK
Trigger: TTTTCGTGAAATTAAGCTTCAGAGGGAAGCCCGAGA...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CATTGCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTAAGGCTTATTCACCTTaGTGTGCTTGTATGGTGGGG +
Preference number: 4 (lower is better)
Translates to: HCCHHLQGQLLTRMEKKRKAYSP*CACMVG
Trigger: CCCCACCATACAAGCACATCAAGGTGAATAAGCCTT...ACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp TGCTGTTTTGACGTAAGCATTGGTAGTCCCTTACCTGCCGGAAGGGATCTTTTGGGTACTGGCGCTTGGTaGAGCACTGGTTCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: CCFDVSIGSPLPAGRDLLGTGAW*STGSGR
Trigger: TCTGCCAGAACCAGTGCTTCACCAAGCGCCAGTACC...CAAAAGATCCCTTCCGGCAGGTAAGGGACTACCAATGCTTACGTCAAAACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGTCTCGTGTGCGTGCTTaGTTCTCGCCATGCACTCCT +
Preference number: 4 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLSRVRA*FSPCTP
Trigger: AGGAGTGCATGGCGAGAATCAAGCACGCACACGAGA...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp AGAGTGGGAGGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGGCATGTAGAAGTGGGTaGTGTCGTTCTCGTGTGCGT +
Preference number: 4 (lower is better)
Translates to: RVGGNLDIRRNSSVAVTLACRSG*CRSRVR
Trigger: ACGCACACGAGAACGACATCACCCACTTCTACATGC...CAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCAGCTATTTGCCCTCTGTaGCTCTCCGCCAGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSAICPL*LSASPS
Trigger: GGAGGGGCTGGCGGAGAGTCACAGAGGGCAAATAGC...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACACATTTCAGAGGAGAGGTAACGCTGAGGAGTaGGGCTGTTTGTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: DEFLATLGKSLRYTFQRRGNAEE*GCLSRN
Trigger: GTTCCTGGACAAACAGCCTCACTCCTCAGCGTTACC...TCTCCTCTGAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTAAGTGGGAGGGAACCTTaGCATTCGGAGAAATTCAAG +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLSGREP*HSEKFK
Trigger: CTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACT...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCAAGTGGGAGGGAACCTTaGCATTCGGAGAAATTCAAG +
Preference number: 4 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPSGREP*HSEKFK
Trigger: CTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACT...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGTGCAGAACTTGCGGTCGAAAAGAAGCGTTTCTaGGGAACAATTCACATTAGT +
Preference number: 4 (lower is better)
Translates to: LAKAQAGQVVGLGAELAVEKKRF*GTIHIS
Trigger: ACTAATGTGAATTGTTCCTCAGAAACGCTTCTTTTC...GACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGGGAGAAGTTAGAGTCTaGACTGGAAAGCACTACTCC +
Preference number: 4 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGGEVRV*TGKHYS
Trigger: GGAGTAGTGCTTTCCAGTTCAGACTCTAACTTCTCC...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGAGGAGCATAAATCTATaGGCCGATCCAGTATTTTCT +
Preference number: 4 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLRSINL*ADPVFS
Trigger: AGAAAATACTGGATCGGCTCATAGATTTATGCTCCT...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCAAACTATCAAACCTGGTaGCAGCACCCAGTATTCCTA +
Preference number: 4 (lower is better)
Translates to: CGDTARPVPRTTFQVRASNYQTW*QHPVFL
Trigger: TAGGAATACTGGGTGCTGTCACCAGGTTTGATAGTT...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGAAACTATCAAACCTGGTaGCAGCACCCAGTATTCCTA +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRNYQTW*QHPVFL
Trigger: TAGGAATACTGGGTGCTGTCACCAGGTTTGATAGTT...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TGGTGTCGCTTCCCCTTCCGAGCAGTGAAGTGGGCAGTGCAGATGATGCTGTTGAACTATCAAACCTGGTaGCAGCACCCAGTATTCCTA +
Preference number: 4 (lower is better)
Translates to: WCRFPFRAVKWAVQMMLLNYQTW*QHPVFL
Trigger: TAGGAATACTGGGTGCTGTCACCAGGTTTGATAGTT...CAACAGCATCATCTGCACTGCCCACTTCACTGCTCGGAAGGGGAAGCGACACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCAATGAAACATGAGGGCTaGTGCTCTATAGAAGCAACT +
Preference number: 4 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPMKHEG*CSIEAT
Trigger: AGTTGCTTCTATAGAGCATCAGCCCTCATGTTTCAT...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACTGGTGTGGGCTCCCACCACCTTCTGCTTTTATaGGCTGAAGGGCAAGTAAGC +
Preference number: 4 (lower is better)
Translates to: VQYRAAGFKSNLTGVGSHHLLLL*AEGQVS
Trigger: GCTTACTTGCCCTTCAGCTCATAAAAGCAGAAGGTG...GTGGGAGCCCACACCAGTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR TCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCAAGTCTTTACTTTGGGTaGCTGCTTATTGAACCAGAG +
Preference number: 4 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPSLYFG*LLIEPE
Trigger: CTCTGGTTCAATAAGCAGTCACCCAAAGTAAAGACT...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGCACCTATGCGCTGGCTaGCTTCTAATGCATCTATCA +
Preference number: 4 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKHLCAG*LLMHLS
Trigger: TGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTG...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp CTCCGCTCCTCTAGGATGAGCCCACTCCTGGCATCTGAAGTGGGACAATGCTGCGGAATGCAGTCTCCTTaGTCTATTACAGGGACTTTT +
Preference number: 4 (lower is better)
Translates to: LRSSRMSPLLASEVGQCCGMQSP*SITGTF
Trigger: AAAAGTCCCTGTAATAGATCAAGGAGACTGCATTCC...GCAGCATTGTCCCACTTCAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GGTTTGAGTCCCTGCAGAAAATCCCACTCGGAGGAGTGGTCGCTGAGGATTCAGTGCGCTTATGAAGTCTaGGCATTACTCACACTGCAG +
Preference number: 4 (lower is better)
Translates to: GLSPCRKSHSEEWSLRIQCAYEV*ALLTLQ
Trigger: CTGCAGTGTGAGTAATGCTCAGACTTCATAAGCGCA...CTGAATCCTCAGCGACCACTCCTCCGAGTGGGATTTTCTGCAGGGACTCAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp AACAGGTCTCGACCACCACTGAGTTGGTTTGAGTCCCTGCAGAAAATCCCACTCAGTGTCATGTTACAATaGTGGCAGGCAGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: NRSRPPLSWFESLQKIPLSVMLQ*WQAAAP
Trigger: TGGGGCTGCTGCCTGCCATCATTGTAACATGACACT...GAGTGGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCGAGACCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp AACAGCAATTCTCATGGTCACCTAACTCATATCAGAATCGGGCCCAGCAGTCAACAGTCCCACCATCCGTaGACAGGTCTCGACCACCAC +
Preference number: 4 (lower is better)
Translates to: NSNSHGHLTHIRIGPSSQQSHHP*TGLDHH
Trigger: GTGGTGGTCGAGACCTGTTCACGGATGGTGGGACTG...TTGACTGCTGGGCCCGATTCTGATATGAGTTAGGTGACCATGAGAATTGCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420906.6
CDS-3UTR GCA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATGTGTCCAGAATTTTATaGCCAGGTAAATTATCATTC +
Preference number: 4 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDVSRIL*PGKLSF
Trigger: GAATGATAATTTACCTGGGCATAAAATTCTGGACAC...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382895.7
CDS-3UTR GCA 90 bp AGTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCGCAGCAATAGGGGGCTaGTGGTGTCTGCAACCCGCA +
Preference number: 4 (lower is better)
Translates to: SVYDDTPPAAASWNITSFAAIGG*WCLQPA
Trigger: TGCGGGTTGCAGACACCAGCAGCCCCCTATTGCTGC...GAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420906.6
CDS-3UTR GCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCACGCGCAACAGGGCTATaGGGCCCGAGATGTCCACAG +
Preference number: 4 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSRATGL*GPRCPQ
Trigger: CTGTGGACATCTCGGGCCGCATAGCCCTGTTGCGCG...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
CDS-3UTR GCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTATGCGGTCATGGATGCTaGTGCATCTCCTGCAACGCA +
Preference number: 4 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLCGHGC*CISCNA
Trigger: TGCGTTGCAGGAGATGCAGCAGCATCCATGACCGCA...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
CDS-3UTR GCA 90 bp TGTGCTTGTATGGTGGGGGCTTGCGCTCGCTCTCCTGTGTTTCTCGGGCTTCCCAGGATTTCTGGTGCCTaGTTCATCTTTATGCACTTT +
Preference number: 4 (lower is better)
Translates to: CACMVGACARSPVFLGLPRISGA*FIFMHF
Trigger: AAAGTGCATAAAGATGAAGCAGGCACCAGAAATCCT...GGGAAGCCCGAGAAACACAGGAGAGCGAGCGCAAGCCCCCACCATACAAGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp TTACTCACACTGCAGCGTGGGCAGCTAAATGGCCTTCATACCAATGCCATGGTTTCTTCCCGTTGGCACTaGCGAGGATTTCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LLTLQRGQLNGLHTNAMVSSRWH*RGFLVP
Trigger: AGGCACCAGAAATCCTCGGCAGTGCCAACGGGAAGA...AACCATGGCATTGGTATGAAGGCCATTTAGCTGCCCACGCTGCAGTGTGAGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp GGCCCCCAGTTATCATCTCCTCATAAACATGACAAAAACAGGACCCATGTCTACTGCATGACCCCCTCCTaGAGGCTACTGGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GPQLSSPHKHDKNRTHVYCMTPS*RLLESW
Trigger: CCAGCTCTCCAGTAGCCTGCAGGAGGGGGTCATGCA...GTAGACATGGGTCCTGTTTTTGTCATGTTTATGAGGAGATGATAACTGGGGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp GAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCATCTATCAGTTATGGGCTATGGCCGTTAAACTTCTaGATGACCCCCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: EGAPMRWLTSNASISYGLWPLNF*MTPSCR
Trigger: CCTGCAGGAGGGGGTCATGCAGAAGTTTAACGGCCA...TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAGATCTGCAGAAACCATaGAAGGCCACCAAGGGTAAC +
Preference number: 4 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRDLQKP*KATKGN
Trigger: GTTACCCTTGGTGGCCTTGCATGGTTTCTGCAGATC...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCTCCCCTGACTACGTGATACTGGCGTaGACTCTTTTTCTGACCTTT +
Preference number: 4 (lower is better)
Translates to: VFSRSGQLPRPGRLSSPDYVILA*TLFLTF
Trigger: AAAGGTCAGAAAAAGAGTGCACGCCAGTATCACGTA...GTCAGGGGAGCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp TCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGGCAGAGGTGGCAAAATGAAGAAGACTCTGCAGCAATaGCAGCCTCCTTGGCTACTT +
Preference number: 4 (lower is better)
Translates to: SRPGAPYRTNWGRGGKMKKTLQQ*QPPWLL
Trigger: AAGTAGCCAAGGAGGCTGGCATTGCTGCAGAGTCTT...CTTCATTTTGCCACCTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGACGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAAGACTCTGCAGCAATaGCAGCCTCCTTGGCTACTT +
Preference number: 4 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRKTLQQ*QPPWLL
Trigger: AAGTAGCCAAGGAGGCTGGCATTGCTGCAGAGTCTT...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp ACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTACTCTCCAGGGTCTCTaGAGAGCTACACAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: TSVCVSSALSYGDSEGSSTLQGL*RATQFG
Trigger: GCCAAACTGTGTAGCTCTGCAGAGACCCTGGAGAGT...AGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp AGAGTGGGAGGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGTCTGGGGTCAGCCTCTaGCGTCTTTTGAGGAGTACT +
Preference number: 4 (lower is better)
Translates to: RVGGNLDIRRNSSVAVTLSGVSL*RLLRST
Trigger: AGTACTCCTCAAAAGACGGCAGAGGCTGACCCCAGA...CAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACACATTTCAGAGGAGACTGCATCTCCCTTCCTaGTTCGTGGCATGGAGACTG +
Preference number: 4 (lower is better)
Translates to: DEFLATLGKSLRYTFQRRLHLPS*FVAWRL
Trigger: CAGTCTCCATGCCACGAAGCAGGAAGGGAGATGCAG...TCTCCTCTGAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCATCTATCAGTTATGGGCTACTGCATCTCCCTTCCTaGTTCGTGGCATGGAGACTG +
Preference number: 4 (lower is better)
Translates to: EGAPMRWLTSNASISYGLLHLPS*FVAWRL
Trigger: CAGTCTCCATGCCACGAAGCAGGAAGGGAGATGCAG...TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp CTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCGACCAAAAACTGGGATaGTGCATCTCCCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LQFVFRLHFRMGTPRARLDQKLG*CISLPA
Trigger: AGCAGGAAGGGAGATGCAGCATCCCAGTTTTTGGTC...GAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR GCA 90 bp GAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCATCTATCAGTTATGGGCTACCTGAAGCATCTGGGTaGTCAGCTACCACCTCATCC +
Preference number: 4 (lower is better)
Translates to: EGAPMRWLTSNASISYGLPEASG*SATTSS
Trigger: GGATGAGGTGGTAGCTGAGCACCCAGATGCTTCAGG...TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGACTTCAGTGGTTTACATaGATCAGACAGATTTTTCGT +
Preference number: 4 (lower is better)
Translates to: FVCTFVWGLRGLVSRAVRLQWFT*IRQIFR
Trigger: ACGAAAAATCTGTCTGATGCATGTAAACCACTGAAG...TCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR GCA 90 bp TGGTGTCGCTTCCCCTTCCGAGCAGTGAAGTGGGCAGTGCAGATGATGCTGTTGTTATTCACCTTGATGTaGTTGTATGGTGGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: WCRFPFRAVKWAVQMMLLLFTLM*LYGGGL
Trigger: CAAGCCCCCACCATACAAGCACATCAAGGTGAATAA...CAACAGCATCATCTGCACTGCCCACTTCACTGCTCGGAAGGGGAAGCGACACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp TACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCGTTCTCGTGTGCGTaGTTGATTCTCGCCATGCAC +
Preference number: 4 (lower is better)
Translates to: YFSLCFVCTFVWGLRGLVSFSCA*LILAMH
Trigger: GTGCATGGCGAGAATCAAGCACGCACACGAGAACGA...GACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp AGAGTGGGAGGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGTCGTTCTCGTGTGCGTaGTTGATTCTCGCCATGCAC +
Preference number: 4 (lower is better)
Translates to: RVGGNLDIRRNSSVAVTLSFSCA*LILAMH
Trigger: GTGCATGGCGAGAATCAAGCACGCACACGAGAACGA...CAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AATGATCACAATGGCAGTTTCGAGGAATCCAGGGTCAGTCCTCACACGGGCCTCGATGTCGTTCTCGTGTaGGTGCTTGATTCTCGCCAT +
Preference number: 4 (lower is better)
Translates to: NDHNGSFEESRVSPHTGLDVVLV*VLDSRH
Trigger: ATGGCGAGAATCAAGCACGCACACGAGAACGACATC...GAGGCCCGTGTGAGGACTGACCCTGGATTCCTCGAAACTGCCATTGTGATCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCGATGTCGTTCTCGTGTaGGTGCTTGATTCTCGCCAT +
Preference number: 4 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLDVVLV*VLDSRH
Trigger: ATGGCGAGAATCAAGCACGCACACGAGAACGACATC...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TGCTGTTTTGACGTAAGCATTGGTAGTCCCTTACCTGCCGGAAGGGATCTTTTGCCCCGAGGAATCCACTaGAATTGGAGGCTCCACACC +
Preference number: 4 (lower is better)
Translates to: CCFDVSIGSPLPAGRDLLPRGIH*NWRLHT
Trigger: GGTGTGGAGCCTCCAATTGCAGTGGATTCCTCGGGG...CAAAAGATCCCTTCCGGCAGGTAAGGGACTACCAATGCTTACGTCAAAACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACACATTTCAGAGGAGACTTCCCTTCCCCTTTTaGTCTGCGCCGCCTCGTTTT +
Preference number: 4 (lower is better)
Translates to: DEFLATLGKSLRYTFQRRLPFPF*SAPPRF
Trigger: AAAACGAGGCGGCGCAGAGCAAAAGGGGAAGGGAAG...TCTCCTCTGAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTACTTCCCTTCCCCTTTTaGTCTGCGCCGCCTCGTTTT +
Preference number: 4 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLLPFPF*SAPPRF
Trigger: AAAACGAGGCGGCGCAGAGCAAAAGGGGAAGGGAAG...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGCTTCCCTTCCCCTTTTaGTCTGCGCCGCCTCGTTTT +
Preference number: 4 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLLPFPF*SAPPRF
Trigger: AAAACGAGGCGGCGCAGAGCAAAAGGGGAAGGGAAG...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATTCACACAGCACCAGCTaGCCGCCATCACCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHSHSTS*PPSPQR
Trigger: CCGCTGCGGTGATGGCGGGCAGCTGGTGCTGTGTGA...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGGTGGTAGGCCTTGGTaGAGAACTTGCGGTCACACA +
Preference number: 4 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLGGRPW*RTCGHT
Trigger: TGTGTGACCGCAAGTTCTGCACCAAGGCCTACCACC...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGGCTGTCCCGTCCTGGTaGTCCTTACAGAACGAATTG +
Preference number: 4 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSEAVPSW*SLQNEL
Trigger: CAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGC...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACATGCGGTCTCACGCCCTaGAAAGTCACTCCTTTCGCC +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTCGLTP*KVTPFA
Trigger: GGCGAAAGGAGTGACTTTGCAGGGCGTGAGACCGCA...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACACAAAGGCACACATGGTaGCCCCTTCTCAGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTQRHTW*PLLRVL
Trigger: GAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTG...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATTTCTGTAAACTTCTCTaGAAGATGGATGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYFCKLL*KMDVSP
Trigger: GGGGGACACATCCATCTTGCAGAGAAGTTTACAGAA...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGATTCTGTAAACTTCTCTaGAAGATGGATGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRFCKLL*KMDVSP
Trigger: GGGGGACACATCCATCTTGCAGAGAAGTTTACAGAA...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CAGGGCCGCATCAGTAAACACACACTTCAGTCGGTGGTGATTTGTGAAATAGGTGAAACTTCCAGTCAGTaGTCAGGGAGGCGTGGGACC +
Preference number: 4 (lower is better)
Translates to: QGRISKHTLQSVVICEIGETSSQ*SGRRGT
Trigger: GGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC...ACCTATTTCACAAATCACCACCGACTGAAGTGTGTGTTTACTGATGCGGCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTCCCAGCCCTGCAGGGTTTAGGTGCAGATaGTGGTTTCGGATGCCAAGG +
Preference number: 4 (lower is better)
Translates to: PKFHPNDILEVQLLPSPAGFRCR*WFRMPR
Trigger: CCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC...TGCAGGGCTGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp GATATCCTGGAAGTGCAGCTTCTTCCCAGCCCTGCAGTCATTGCAGAACCAGCTGGGTATGGGTTTAGGTaGAGATGCTGGTTTCGGATG +
Preference number: 4 (lower is better)
Translates to: DILEVQLLPSPAVIAEPAGYGFR*RCWFRM
Trigger: CATCCGAAACCAGCATCTGCACCTAAACCCATACCC...AGCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAGCTGCACTTCCAGGATATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp GACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACACATTTCAGAGGAGACTGGAAGATGGGCACTaGACACGCCGGGGTTTAGAT +
Preference number: 4 (lower is better)
Translates to: DEFLATLGKSLRYTFQRRLEDGH*TRRGLD
Trigger: ATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAG...TCTCCTCTGAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GACCTCTATTGCCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGACGTGCAAAGCCCTGCTaGAGCTCTGGACAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: DLYCQYVHYLKMPPYYNGRAKPC*SSGQPP
Trigger: TGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACG...TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ATCCTGCAACATTTGAGCAGAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATCCTGTCCAAGGACTCTaGACATCACACACAGTCACC +
Preference number: 4 (lower is better)
Translates to: ILQHLSRANRGTQPALSHPVQGL*TSHTVT
Trigger: GGTGACTGTGTGTGATGTGCAGAGTCCTTGGACAGG...ATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTCTGCTCAAATGTTGCAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCTCCTTTCCTGTGGTGTaGTCAGCTCTTAACGTCTCC +
Preference number: 4 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSSFPVV*SALNVS
Trigger: GGAGACGTTAAGAGCTGAGCACACCACAGGAAAGGA...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGAGAAATGAAGCAAGTTaGCAAAGTCATAACGACCTT +
Preference number: 4 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWRNEAS*QSHNDL
Trigger: AAGGTCGTTATGACTTTGGCAACTTGCTTCATTTCT...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGTACCCGAGAGTTATATaGAAAAAGGCCAACAACTAT +
Preference number: 4 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWYPRVI*KKANNY
Trigger: ATAGTTGTTGGCCTTTTTGCATATAACTCTCGGGTA...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GCTATCAGACAGGAGCCTCTCCAGCGAGGGGAATCCGTGGCTTTACAGCCCTCCCTTGAAAATACTATATaGCTGGATGGTCAGCATGCT +
Preference number: 4 (lower is better)
Translates to: AIRQEPLQRGESVALQPSLENTI*LDGQHA
Trigger: AGCATGCTGACCATCCAGGCATATAGTATTTTCAAG...GGAGGGCTGTAAAGCCACGGATTCCCCTCGCTGGAGAGGCTCCTGTCTGATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGAGTCGTCTTCTAACCTaGACAGGCTTTTGTGTAGCC +
Preference number: 4 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKSRLLT*TGFCVA
Trigger: GGCTACACAAAAGCCTGTGCAGGTTAGAAGACGACT...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGGCCACCTTCTGTGACTaGAAAGCGCTCACCTACTCT +
Preference number: 4 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKATFCD*KALTYS
Trigger: AGAGTAGGTGAGCGCTTTGCAGTCACAGAAGGTGGC...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GACCTCTATTGCCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGACGTCCACCACAGCCATaGTGCGGCACTGAGCTCCGA +
Preference number: 4 (lower is better)
Translates to: DLYCQYVHYLKMPPYYNGRPPQP*CGTELR
Trigger: TCGGAGCTCAGTGCCGCAGCATGGCTGTGGTGGACG...TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TTACTCACACTGCAGCGTGGGCAGCTAAATGGCCTTCATACCAATGCCATGGTTGGCCTGTCCAACCCTTaGCTCACTACCCTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: LLTLQRGQLNGLHTNAMVGLSNP*LTTLFQ
Trigger: TTGGAACAGGGTAGTGAGGCAAGGGTTGGACAGGCC...AACCATGGCATTGGTATGAAGGCCATTTAGCTGCCCACGCTGCAGTGTGAGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp AGGTCTCGACCACCACTGAGTTGGTTTGAGTCCCTGCAGAAAATCCCACTCGGAGCAATTCCAACACTTTaGGAGGACGAGGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: RSRPPLSWFESLQKIPLGAIPTL*EDEAGR
Trigger: TCTACCTGCCTCGTCCTCCCAAAGTGTTGGAATTGC...TCCGAGTGGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCGAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420906.6
CDS-3UTR CCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTATCGGAGTCTTCCCGTTaGCACTGCCGAGGATTTCTG +
Preference number: 4 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLSESSR*HCRGFL
Trigger: CAGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGA...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTCCCAGCCCTGCAAGGCTACTGGAGAGCTaGGCTTTGCTGAGGAACACA +
Preference number: 4 (lower is better)
Translates to: PKFHPNDILEVQLLPSPARLLES*ALLRNT
Trigger: TGTGTTCCTCAGCAAAGCCCAGCTCTCCAGTAGCCT...TGCAGGGCTGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp AGAGTGGGAGGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGTTTCAGCTTGTCGGCTaGAATAAAGGGCAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: RVGGNLDIRRNSSVAVTLFQLVG*NKGQGV
Trigger: GACGCCCTGCCCTTTATTCCAGCCGACAAGCTGAAA...CAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGTTTCAGCTTGTCGGCTaGAATAAAGGGCAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKFQLVG*NKGQGV
Trigger: GACGCCCTGCCCTTTATTCCAGCCGACAAGCTGAAA...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp ACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTACTCAAAACGCAGTTTaGCATCGTGTGCGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: TSVCVSSALSYGDSEGSSTQNAV*HRVRRV
Trigger: AACCCGGCGCACACGATGCCAAACTGCGTTTTGAGT...AGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp AGAGTGGGAGGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGACTCAAAACGCAGTTTaGCATCGTGTGCGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: RVGGNLDIRRNSSVAVTLTQNAV*HRVRRV
Trigger: AACCCGGCGCACACGATGCCAAACTGCGTTTTGAGT...CAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TTCATCTATGTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCACTCAAAACGCAGTTTaGCATCGTGTGCGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: FIYVFSRSGQLPRPGRLSTQNAV*HRVRRV
Trigger: AACCCGGCGCACACGATGCCAAACTGCGTTTTGAGT...GCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGACATAGATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp AGCAGCCCCAGTCCCACCATCCGTGAACAGGTCTCGACCACCACTGAGTTGGTTATCCCTTTCATTTCCTaGGACTCAAAACGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: SSPSPTIREQVSTTTELVIPFIS*DSKRSL
Trigger: CAAACTGCGTTTTGAGTCCCAGGAAATGAAAGGGAT...AACCAACTCAGTGGTGGTCGAGACCTGTTCACGGATGGTGGGACTGGGGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTAGTCTCTTCCAGTGTTTaGACAAGACTCTTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVVSSSV*TRLFLS
Trigger: GCTAAGAAAGAGTCTTGTCCAAACACTGGAAGAGAC...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GTCTGGAAGCAACAGGAATCAGGTGTGGTGTGTGAGTCGCCTTCCACCCCACCCGTCTCTTCCAGTGTTTaGACAAGACTCTTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: VWKQQESGVVCESPSTPPVSSSV*TRLFLS
Trigger: GCTAAGAAAGAGTCTTGTCCAAACACTGGAAGAGAC...GGGTGGGGTGGAAGGCGACTCACACACCACACCTGATTCCTGTTGCTTCCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp GCTATCAGACAGGAGCCTCTCCAGCGAGGGGAATCCGTGGCTTTACAGCCCTCCTTGTATTTCAACAGGTaGTCTTTGTCTCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: AIRQEPLQRGESVALQPSLYFNR*SLSLPV
Trigger: CACTGGAAGAGACAAAGACCACCTGTTGAAATACAA...GGAGGGCTGTAAAGCCACGGATTCCCCTCGCTGGAGAGGCTCCTGTCTGATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGGGTAACCCGACACTTTaGACCACACCAAATCACCAA +
Preference number: 4 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKGNPTL*TTPNHQ
Trigger: TTGGTGATTTGGTGTGGTCCAAAGTGTCGGGTTACC...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGTATCCAAGCTCTTTCTaGGGCGTCACCAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGYPSSF*GVTKEL
Trigger: CAGTTCTTTGGTGACGCCCCAGAAAGAGCTTGGATA...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCATCCGCCTTCTCTTCATaGGAATGCACTCTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPSAFSS*ECTLLS
Trigger: TGAGAGAAGAGTGCATTCCCATGAAGAGAAGGCGGA...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCATCTATCAGTTATGGGCTAGTGGCATGGAGACTGTaGTCTTCTTCCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: EGAPMRWLTSNASISYGLVAWRL*SSSSQE
Trigger: CTCCTGGGAGGAAGAAGACCACAGTCTCCATGCCAC...TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGTCCTGCTTCGTGGCATaGAGACTGTGGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: NKVVLEDGHCTRRGLDVKSCFVA*RLWSSS
Trigger: GGAAGAAGACCACAGTCTCCATGCCACGAAGCAGGA...CTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp ATCCTGCAACATTTGAGCAGAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATTCCTGCTTCGTGGCATaGAGACTGTGGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: ILQHLSRANRGTQPALSHSCFVA*RLWSSS
Trigger: GGAAGAAGACCACAGTCTCCATGCCACGAAGCAGGA...ATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTCTGCTCAAATGTTGCAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp CATTGCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTCAGAAGACCAAAAACTaGGATGCTGCATCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: HCCHHLQGQLLTRMEKKRQKTKN*DAASPF
Trigger: GAAGGGAGATGCAGCATCCCAGTTTTTGGTCTTCTG...ACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCCCACCAGGGCAAACTTaGTGTTGTAGCGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: YFSLCFVCTFVWGLRGLVPPGQT*CCSVLS
Trigger: AGAGAGCACGCTACAACACCAAGTTTGCCCTGGTGG...GACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR CCA 90 bp TTCATCTATGTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCAGGAGGCTGCCTCCATaGCCTTGTAAGAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: FIYVFSRSGQLPRPGRLSRRLPP*PCKSLF
Trigger: GAACAAGCTCTTACAAGGCCATGGAGGCAGCCTCCT...GCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGACATAGATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp CTGAGCATTACTCACACTGCAGCGTGGGCAGCTAAATGGCCTTCATACCAATGCAGGAGGCTGCCTCCATaGCCTTGTAAGAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: LSITHTAAWAAKWPSYQCRRLPP*PCKSLF
Trigger: GAACAAGCTCTTACAAGGCCATGGAGGCAGCCTCCT...GCATTGGTATGAAGGCCATTTAGCTGCCCACGCTGCAGTGTGAGTAATGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGAGGAGGCTGCCTCCATaGCCTTGTAAGAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKRRLPP*PCKSLF
Trigger: GAACAAGCTCTTACAAGGCCATGGAGGCAGCCTCCT...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGTTTTTCGTTGCTGCCTaGCTCTTGAGCGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: NKVVLEDGHCTRRGLDVKFFVAA*LLSEEA
Trigger: AGCCTCCTCGCTCAAGAGCCAGGCAGCAACGAAAAA...CTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGTTTTTCGTTGCTGCCTaGCTCTTGAGCGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSEFFVAA*LLSEEA
Trigger: AGCCTCCTCGCTCAAGAGCCAGGCAGCAACGAAAAA...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTATTTCGCTTCTTCAGTaGTTTACATGCATCAGACAG +
Preference number: 4 (lower is better)
Translates to: GHVGKGTHGAPFSGCSRLISLLQ*FTCIRQ
Trigger: CTGTCTGATGCATGTAAACCACTGAAGAAGCGAAAT...AAGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTATTTCGCTTCTTCAGTaGTTTACATGCATCAGACAG +
Preference number: 4 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTISLLQ*FTCIRQ
Trigger: CTGTCTGATGCATGTAAACCACTGAAGAAGCGAAAT...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGATTTCGCTTCTTCAGTaGTTTACATGCATCAGACAG +
Preference number: 4 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWISLLQ*FTCIRQ
Trigger: CTGTCTGATGCATGTAAACCACTGAAGAAGCGAAAT...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGCTGAAGATGCTGCCGTaGAAGCCCGATTTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSELKMLP*KPDFAS
Trigger: AGAAGCGAAATCGGGCTTCCACGGCAGCATCTTCAG...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CATGCACTCCTCCTCGTCGATCAGCTCCCCAACGTACTCGTTAACAAATTCTCCCTGAAGATGCTGCCGTaGAAGCCCGATTTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: HALLLVDQLPNVLVNKFSLKMLP*KPDFAS
Trigger: AGAAGCGAAATCGGGCTTCCACGGCAGCATCTTCAG...GGAGAATTTGTTAACGAGTACGTTGGGGAGCTGATCGACGAGGAGGAGTGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGCTGAAGATGCTGCCGTaGAAGCCCGATTTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKLKMLP*KPDFAS
Trigger: AGAAGCGAAATCGGGCTTCCACGGCAGCATCTTCAG...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp CATTGCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTCAAATCCAACTTGACTaGTGTGGGCTCCCACAAAAG +
Preference number: 4 (lower is better)
Translates to: HCCHHLQGQLLTRMEKKRQIQLD*CGLPQK
Trigger: CTTTTGTGGGAGCCCACACCAGTCAAGTTGGATTTG...ACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGCAAATCCAACTTGACTaGTGTGGGCTCCCACAAAAG +
Preference number: 4 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKQIQLD*CGLPQK
Trigger: CTTTTGTGGGAGCCCACACCAGTCAAGTTGGATTTG...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACTGGTGTGGGCTCCCACCAAATCCAACTTGACTaGTGTGGGCTCCCACAAAAG +
Preference number: 4 (lower is better)
Translates to: VQYRAAGFKSNLTGVGSHQIQLD*CGLPQK
Trigger: CTTTTGTGGGAGCCCACACCAGTCAAGTTGGATTTG...GTGGGAGCCCACACCAGTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000678714.1
CDS-3UTR CCA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACACACATACTCCTTTTTaGCAGTCACTCCTCGCTCAG +
Preference number: 4 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDTHTPF*QSLLAQ
Trigger: CTGAGCGAGGAGTGACTGCCAAAAAGGAGTATGTGT...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCTTGGGTTTGAAGGGTTaGAAGCATGGCAGCTCACAC +
Preference number: 4 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLLGLKG*KHGSSH
Trigger: GTGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAA...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGGCAGAGGTGGCAAAATGAAGTTGGGTTTGAAGGGTTaGAAGCATGGCAGCTCACAC +
Preference number: 4 (lower is better)
Translates to: SRPGAPYRTNWGRGGKMKLGLKG*KHGSSH
Trigger: GTGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAA...CTTCATTTTGCCACCTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGACGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp TCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGGCAGAGGTGGCAAAATGAAGGGAACATTTTTGGGATaGCAAACTTCTGCCGGCCAC +
Preference number: 4 (lower is better)
Translates to: SRPGAPYRTNWGRGGKMKGTFLG*QTSAGH
Trigger: GTGGCCGGCAGAAGTTTGCCATCCCAAAAATGTTCC...CTTCATTTTGCCACCTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGACGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp GTAGTTCCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTCCCAGCGATGTGCTTGTATGGTaGGGGCTTGCGCTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: VVPKFHPNDILEVQLLPSDVLVW*GLALAL
Trigger: GAGAGCGAGCGCAAGCCCCCACCATACAAGCACATC...GCTGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGGAACTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAGAGAGTAGTTTCCTTTaGGGCCAGCGTCTATTATAC +
Preference number: 4 (lower is better)
Translates to: LRARKGATRRRVSSDPWEESSFL*GQRLLY
Trigger: GTATAATAGACGCTGGCCCCAAAGGAAACTACTCTC...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACACATTTCAGAGGAGAGGAATCCACTGCAATTaGAGGCTCCACACCGGCAGA +
Preference number: 4 (lower is better)
Translates to: DEFLATLGKSLRYTFQRRGIHCN*RLHTGR
Trigger: TCTGCCGGTGTGGAGCCTCCAATTGCAGTGGATTCC...TCTCCTCTGAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAACAGGTGGTAGGCCTTaGTGCAGAACTTGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLTGGRP*CRTCGH
Trigger: GTGACCGCAAGTTCTGCACCAAGGCCTACCACCTGT...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTAGAATTGGGGCAGAGGTaGCAAAATGAAGTCGAAGGT +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLELGQR*QNEVEG
Trigger: ACCTTCGACTTCATTTTGCCACCTCTGCCCCAATTC...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACGAATTGGGGCAGAGGTaGCAAAATGAAGTCGAAGGT +
Preference number: 4 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDELGQR*QNEVEG
Trigger: ACCTTCGACTTCATTTTGCCACCTCTGCCCCAATTC...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACACCAGGAACGCTGAGCTaGGCTCAGACGGTCATCAGT +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTPGTLS*AQTVIS
Trigger: ACTGATGACCGTCTGAGCCCAGCTCAGCGTTCCTGG...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GATATCCTGGAAGTGCAGCTTCTTCCCAGCCCTGCAGTCATTGCAGAACCAGCTGTTTCTAGCGACCCTTaGGAAAAGCCTACGCTACAC +
Preference number: 4 (lower is better)
Translates to: DILEVQLLPSPAVIAEPAVSSDP*EKPTLH
Trigger: GTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAAC...AGCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAGCTGCACTTCCAGGATATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCGTTTCTAGCGACCCTTaGGAAAAGCCTACGCTACAC +
Preference number: 4 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLVSSDP*EKPTLH
Trigger: GTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAAC...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCAGCTTCTCACTAGGATaGAAAAGAAGCGTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: FVFRLHFRMGTPRARLPGSFSLG*KRSVSE
Trigger: CTCAGAAACGCTTCTTTTCCATCCTAGTGAGAAGCT...GCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp CCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTCCCAGCCCTGCAAGTGGGTGTCATACCTaGCCTAGACCAGTGCCCATA +
Preference number: 4 (lower is better)
Translates to: PKFHPNDILEVQLLPSPASGCHT*PRPVPI
Trigger: TATGGGCACTGGTCTAGGCCAGGTATGACACCCACT...TGCAGGGCTGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCACAGCTCGTTTCCCCTaGGTCCTCTGTGTAGTTAAC +
Preference number: 4 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLTARFP*VLCVVN
Trigger: GTTAACTACACAGAGGACCCAGGGGAAACGAGCTGT...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGTTTAGGTGCAGATGCTaGTTTCGGATGCCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: QFVFRLHFRMGTPRARLPFRCRC*FRMPRN
Trigger: ATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAA...CGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATTTTAGGTGCAGATGCTaGTTTCGGATGCCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYFRCRC*FRMPRN
Trigger: ATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAA...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACACTGAGGACGGACAGCTaGGTTCTCACTTCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTLRTDS*VLTSGA
Trigger: GGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAG...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CGCTCAGACTTTTTGGATGAGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTGGACCCAGCCAGCCATaGACGGGTGTCGCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: RSDFLDETDTSVCVSSALGPSQP*TGVAGR
Trigger: TCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCC...AAGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGAGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCGGCTGTGACACCCCGTaGACACAGCATTTTACTCTA +
Preference number: 4 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLGCDTP*TQHFTL
Trigger: TAGAGTAAAATGCTGTGTCCACGGGGTGTCACAGCC...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTACTATTTTCCCCCAACTaGCAAGTCTCAACTCTCTAT +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVLFSPN*QVSTLY
Trigger: ATAGAGAGTTGAGACTTGCCAGTTGGGGGAAAATAG...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCTATGGGCTAGCTGGCTaGCCACCCATGCAAAATTCA +
Preference number: 4 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSYGLAG*PPMQNS
Trigger: TGAATTTTGCATGGGTGGCCAGCCAGCTAGCCCATA...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGTGCATCTATCAGTTATaGGCTAGCTGGCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKCIYQL*ASWLAT
Trigger: GGTGGCCAGCCAGCTAGCCCATAACTGATAGATGCA...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp CACAGGAGCAGCAAGCTTGCTCCTGACAGCATGGCTCTCACACAGCATCCTCCCTCTTTGGACACCATTTaGTCATTTGCAGGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: HRSSKLAPDSMALTQHPPSLDTI*SFAGFC
Trigger: GCAAAACCCTGCAAATGACCAAATGGTGTCCAAAGA...GGGAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGCAGGAAACCAGGAGATaGTCCTCTCGGAAAACTCCG +
Preference number: 4 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKQETRR*SSRKTP
Trigger: CGGAGTTTTCCGAGAGGACCATCTCCTGGTTTCCTG...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp ATCCTGCAACATTTGAGCAGAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATCCTCAAGTTTTACACTaGAGAGCCACCTCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: ILQHLSRANRGTQPALSHPQVLH*RATSPL
Trigger: GAGAGGGGAGGTGGCTCTCCAGTGTAAAACTTGAGG...ATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTCTGCTCAAATGTTGCAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGTGGAAATGCTTATACTaGCTTCCATGCCGGGACACA +
Preference number: 4 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKWKCLY*LPCRDT
Trigger: TGTGTCCCGGCATGGAAGCCAGTATAAGCATTTCCA...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAATGCCCTTTCAACTCAACTaGATCAAACGAGCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: GQVAAAPNSRPALVKGKMPFQLN*IKRAKD
Trigger: GTCCTTGGCTCGTTTGATCCAGTTGAGTTGAAAGGG...CATTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GCCCCGCCCAGGTTGCCTAGGTCCCTGACCTTCCTGCACTGGAAGGCCTACACTACAGGCATTCAGCATTaGAAACATCACAAACATTTA +
Preference number: 4 (lower is better)
Translates to: APPRLPRSLTFLHWKAYTTGIQH*KHHKHL
Trigger: TAAATGTTTGTGATGTTTCCAATGCTGAATGCCTGT...AGTGTAGGCCTTCCAGTGCAGGAAGGTCAGGGACCTAGGCAACCTGGGCGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420906.6
CDS-3UTR TCA 90 bp TCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGGCAGAGGTGGCAAAATGAAGCACTTTACAACACTCTaGACAGAAAGGGGACTCTGC +
Preference number: 4 (lower is better)
Translates to: SRPGAPYRTNWGRGGKMKHFTTL*TERGLC
Trigger: GCAGAGTCCCCTTTCTGTTCAGAGTGTTGTAAAGTG...CTTCATTTTGCCACCTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGACGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp GGCCTCGACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGACCATTTTCTTCTGACTaGGACACATCAGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: GLDPATLASCITLNQSLRPFSSD*DTSAAL
Trigger: CAGTGCTGCTGATGTGTCTCAGTCAGAAGAAAATGG...TCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTCGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR TCA 90 bp GGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAATGTTGTCCATTTTCTTCTaGCTGAGACACATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GQVAAAPNSRPALVKGKMLSIFF*LRHISS
Trigger: GCTGCTGATGTGTCTCAGTCAGAAGAAAATGGACAA...CATTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TCTCGACCACCACTGAGTTGGTTTGAGTCCCTGCAGAAAATCCCACTCGGAGGACCAAAGAACTGTACGTaGTACTGGCGTGCACTCTTT +
Preference number: 4 (lower is better)
Translates to: SRPPLSWFESLQKIPLGGPKNCT*YWRALF
Trigger: AAAGAGTGCACGCCAGTATCACGTACAGTTCTTTGG...TCCTCCGAGTGGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGACCAAAGAACTGTACGTaGTACTGGCGTGCACTCTTT +
Preference number: 4 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRPKNCT*YWRALF
Trigger: AAAGAGTGCACGCCAGTATCACGTACAGTTCTTTGG...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp TTCATCTATGTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCCCACATAGAGAAAGGTaGACTTGGCTTTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: FIYVFSRSGQLPRPGRLSPHRER*TWLSAP
Trigger: AGGAGCGGAAAGCCAAGTTCACCTTTCTCTATGTGG...GCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGACATAGATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR TCA 90 bp ATCCTGCAACATTTGAGCAGAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATCCACATAGAGAAAGGTaGACTTGGCTTTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: ILQHLSRANRGTQPALSHPHRER*TWLSAP
Trigger: AGGAGCGGAAAGCCAAGTTCACCTTTCTCTATGTGG...ATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTCTGCTCAAATGTTGCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TTACTCACACTGCAGCGTGGGCAGCTAAATGGCCTTCATACCAATGCCATGGTTCAGCAGCTTCTTCACTaGCTCCTGAGGATTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LLTLQRGQLNGLHTNAMVQQLLH*LLRILP
Trigger: TGGCAGAATCCTCAGGAGTCAGTGAAGAAGCTGCTG...AACCATGGCATTGGTATGAAGGCCATTTAGCTGCCCACGCTGCAGTGTGAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGTTCAATCTCCTCACCTaGAGCATCTGGGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLFNLLT*SIWVLS
Trigger: GCTGAGCACCCAGATGCTTCAGGTGAGGAGATTGAA...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp AGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCTTCAATCTCCTCACCTaGAGCATCTGGGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: RYFSLCFVCTFVWGLRGLFNLLT*SIWVLS
Trigger: GCTGAGCACCCAGATGCTTCAGGTGAGGAGATTGAA...GAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR TCA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGACTCCACTGTGACCTaGGCAGCTCTTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLDSTVT*AALQSP
Trigger: AGGAGATTGAAGAGCTGCTCAGGTCACAGTGGAGTC...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp AGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGAAGGTTGCTGCCTGGCTCTTaGGCGAGGAGGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RNMMHTMGSMHHLQNVGRLLPGS*ARRLPP
Trigger: TGGAGGCAGCCTCCTCGCTCAAGAGCCAGGCAGCAA...CCTTCCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR TCA 90 bp TGCTGTTTTGACGTAAGCATTGGTAGTCCCTTACCTGCCGGAAGGGATCTTTTGGCTAAACCCAAGAGCTaGAGATGCTGCCGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: CCFDVSIGSPLPAGRDLLAKPKS*RCCRGS
Trigger: GCTTCCACGGCAGCATCTTCAGCTCTTGGGTTTAGC...CAAAAGATCCCTTCCGGCAGGTAAGGGACTACCAATGCTTACGTCAAAACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCAAGGCTTATTCACCTTaGTGTGCTTGTATGGTGGGG +
Preference number: 4 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLKAYSP*CACMVG
Trigger: CCCCACCATACAAGCACATCAAGGTGAATAAGCCTT...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAGCACTTAGGGATTTCTaGAATATCCGCTGTGTAGAT +
Preference number: 4 (lower is better)
Translates to: LRARKGATRRRVSSDPWEALRDF*NIRCVD
Trigger: ATCTACACAGCGGATATTTCAGAAATCCCTAAGTGC...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGCCACACACGTCACAATaGTGCCAAGGACATTCCCAC +
Preference number: 4 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLPHTSQ*CQGHSH
Trigger: GTGGGAATGTCCTTGGCATCATTGTGACGTGTGTGG...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp AGAGTGGGAGGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGGCAGAGGTGGCAAAATaGAGTCGAAGGTTTGCCACA +
Preference number: 4 (lower is better)
Translates to: RVGGNLDIRRNSSVAVTLAEVAK*SRRFAT
Trigger: TGTGGCAAACCTTCGACTTCATTTTGCCACCTCTGC...CAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TCCACTGAGTTATCAACGGGTATTGTAGAGACATTCAAAGTTAGTGTTACTTGCCGCAGCGGACGCTGCTaGGGATGGCTCAGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: STELSTGIVETFKVSVTCRSGRC*GWLSGG
Trigger: CCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCG...GCAAGTAACACTAACTTTGAATGTCTCTACAATACCCGTTGATAACTCAGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GGCTTCCCTCTGAAGCTTAATTTCACGAAAACGAGCTTCAGCTTCTTGCAGTGCGGTAACGCTGAGGAGTaGGGCTGTTTGTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GFPLKLNFTKTSFSFLQCGNAEE*GCLSRN
Trigger: GTTCCTGGACAAACAGCCTCACTCCTCAGCGTTACC...GCACTGCAAGAAGCTGAAGCTCGTTTTCGTGAAATTAAGCTTCAGAGGGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTGAAAAGAAGCGTTTCTaGGGAACAATTCACATTAGT +
Preference number: 4 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTEKKRF*GTIHIS
Trigger: ACTAATGTGAATTGTTCCTCAGAAACGCTTCTTTTC...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTGTCGGTGGTGATTTGTaGAATAGGTTTAGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: GHVGKGTHGAPFSGCSRLVGGDL*NRFSKN
Trigger: ATTTTTGCTAAACCTATTTCACAAATCACCACCGAC...AAGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTAAGGAGCATAAATCTATaGGCCGATCCAGTATTTTCT +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVRSINL*ADPVFS
Trigger: AGAAAATACTGGATCGGCTCATAGATTTATGCTCCT...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGATGCCAAGGAATCCTaGGGGATTGGGGCGGTTTTT +
Preference number: 4 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLDAKES*GIGAVF
Trigger: AAAAACCGCCCCAATCCCTCAGGATTCCTTGGCATC...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCACGGATTAAATGGCCTTaGTTAGTTATCTTACCTTGG +
Preference number: 4 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPRIKWP*LVILPW
Trigger: CCAAGGTAAGATAACTAATCAAGGCCATTTAATCCG...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp CACAGGAGCAGCAAGCTTGCTCCTGACAGCATGGCTCTCACACAGCATCCTCCCTGGGTGACTGCTTATTaGACCAGAGCCATTTTTATA +
Preference number: 4 (lower is better)
Translates to: HRSSKLAPDSMALTQHPPWVTAY*TRAIFI
Trigger: TATAAAAATGGCTCTGGTTCAATAAGCAGTCACCCA...GGGAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGCCCTGGTTATTCAGCTaGTGCCAATGTCATGCTGCT +
Preference number: 4 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKPWLFS*CQCHAA
Trigger: AGCAGCATGACATTGGCATCAGCTGAATAACCAGGG...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp AGGTTGCCTAGGTCCCTGACCTTCCTGCACTGGAAGGCCTACACTCCTCTAATGATATGTCAGCTCAACTaGCACTGTGCCCTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: RLPRSLTFLHWKAYTPLMICQLN*HCALSE
Trigger: TTCTGAAAGGGCACAGTGTCAGTTGAGCTGACATAT...CATTAGAGGAGTGTAGGCCTTCCAGTGCAGGAAGGTCAGGGACCTAGGCAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp TTACTCACACTGCAGCGTGGGCAGCTAAATGGCCTTCATACCAATGCCATGGTTAGTGTCATGTTACAATaGTGGCAGGCAGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: LLTLQRGQLNGLHTNAMVSVMLQ*WQAAAP
Trigger: TGGGGCTGCTGCCTGCCATCATTGTAACATGACACT...AACCATGGCATTGGTATGAAGGCCATTTAGCTGCCCACGCTGCAGTGTGAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp CCGCCTTCTGACTCAGCAAGAGTAAGGGGCCTGTCCAACCCTTGCCTCACTACCTCTCTCTACTGTACCTaGCAACAGTATAAGCAACAA +
Preference number: 4 (lower is better)
Translates to: PPSDSARVRGLSNPCLTTSLYCT*QQYKQQ
Trigger: TTGTTGCTTATACTGTTGTCAGGTACAGTAGAGAGA...GGTAGTGAGGCAAGGGTTGGACAGGCCCCTTACTCTTGCTGAGTCAGAAGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp CAGGGCCGCATCAGTAAACACACACTTCAGTCGGTGGTGATTTGTGAAATAGGTGGTCATGGATGCTGCTaGATCTCCTGCAACGCACAG +
Preference number: 4 (lower is better)
Translates to: QGRISKHTLQSVVICEIGGHGCC*ISCNAQ
Trigger: CTGTGCGTTGCAGGAGATGCAGCAGCATCCATGACC...ACCTATTTCACAAATCACCACCGACTGAAGTGTGTGTTTACTGATGCGGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
CDS-3UTR GCA 90 bp GTAGTTCCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTCCCAGCGGTCATGGATGCTGCTaGATCTCCTGCAACGCACAG +
Preference number: 4 (lower is better)
Translates to: VVPKFHPNDILEVQLLPSGHGCC*ISCNAQ
Trigger: CTGTGCGTTGCAGGAGATGCAGCAGCATCCATGACC...GCTGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGGAACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp TGTGCTTGTATGGTGGGGGCTTGCGCTCGCTCTCCTGTGTTTCTCGGGCTTCCCCCTGCTTCATCTTTATaGACTTTACAACACTCTGAA +
Preference number: 4 (lower is better)
Translates to: CACMVGACARSPVFLGLPPASSL*TLQHSE
Trigger: TTCAGAGTGTTGTAAAGTGCATAAAGATGAAGCAGG...GGGAAGCCCGAGAAACACAGGAGAGCGAGCGCAAGCCCCCACCATACAAGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTCCTGCTTCATCTTTATaGACTTTACAACACTCTGAA +
Preference number: 4 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTPASSL*TLQHSE
Trigger: TTCAGAGTGTTGTAAAGTGCATAAAGATGAAGCAGG...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCGCCGAGGATTTCTGGTaGCTGCTTCATCTTTATGCA +
Preference number: 4 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSAEDFW*LLHLYA
Trigger: TGCATAAAGATGAAGCAGGCACCAGAAATCCTCGGC...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACATCTTCCCGTTGGCACTaGCGAGGATTTCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTSSRWH*RGFLVP
Trigger: AGGCACCAGAAATCCTCGGCAGTGCCAACGGGAAGA...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TTCATCTATGTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCCAGTTTGGCATCGTGTaGGCCGGGTTCTCCATTAAA +
Preference number: 4 (lower is better)
Translates to: FIYVFSRSGQLPRPGRLSQFGIV*AGFSIK
Trigger: TTTAATGGAGAACCCGGCGCACACGATGCCAAACTG...GCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGACATAGATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp ACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTTTCTCCCAAAGACTCTaGAGCAATGCCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: TSVCVSSALSYGDSEGSSFSQRL*SNASLL
Trigger: AAGGAGGCTGGCATTGCTGCAGAGTCTTTGGGAGAA...AGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACACTGCATCTCCCTTCCTaGTTCGTGGCATGGAGACTG +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTLHLPS*FVAWRL
Trigger: CAGTCTCCATGCCACGAAGCAGGAAGGGAGATGCAG...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TTCATCTATGTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCGACCAAAAACTGGGATaGTGCATCTCCCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: FIYVFSRSGQLPRPGRLSDQKLG*CISLPA
Trigger: AGCAGGAAGGGAGATGCAGCATCCCAGTTTTTGGTC...GCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGACATAGATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp GGCTTCCCTCTGAAGCTTAATTTCACGAAAACGAGCTTCAGCTTCTTGCAGTGCCCTGAAGCATCTGGGTaGTCAGCTACCACCTCATCC +
Preference number: 4 (lower is better)
Translates to: GFPLKLNFTKTSFSFLQCPEASG*SATTSS
Trigger: GGATGAGGTGGTAGCTGAGCACCCAGATGCTTCAGG...GCACTGCAAGAAGCTGAAGCTCGTTTTCGTGAAATTAAGCTTCAGAGGGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp GGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTCTTCAGTGGTTTACATaGATCAGACAGATTTTTCGT +
Preference number: 4 (lower is better)
Translates to: GHVGKGTHGAPFSGCSRLLQWFT*IRQIFR
Trigger: ACGAAAAATCTGTCTGATGCATGTAAACCACTGAAG...AAGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGCATTGCAGAACCAGCTaGCGTCAGGCATCTCGATGT +
Preference number: 4 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLHCRTS*RQASRC
Trigger: ACATCGAGATGCCTGACGGCAGCTGGTTCTGCAATG...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATCCCGCGGGACACACCTaGGGGTGGCACTCAAACATC +
Preference number: 4 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHPAGHT*GWHSNI
Trigger: GATGTTTGAGTGCCACCCGCAGGTGTGTCCCGCGGG...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACACATTTCAGAGGAGATCGTTCTCGTGTGCGTaGTTGATTCTCGCCATGCAC +
Preference number: 4 (lower is better)
Translates to: DEFLATLGKSLRYTFQRRSFSCA*LILAMH
Trigger: GTGCATGGCGAGAATCAAGCACGCACACGAGAACGA...TCTCCTCTGAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GTAGTTCCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTCCCAGCCCTTGGTGCAGAACTTaGGGTCACACAGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: VVPKFHPNDILEVQLLPSPWCRT*GHTAPA
Trigger: AGCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGG...GCTGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGGAACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCAATGAAGTCGAAGGTTTaGCACACACGTCACAATGAT +
Preference number: 4 (lower is better)
Translates to: CGDTARPVPRTTFQVRASMKSKV*HTRHND
Trigger: ATCATTGTGACGTGTGTGGCAAACCTTCGACTTCAT...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCATTCTGTAAACTTCTCTaGAAGATGGATGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPFCKLL*KMDVSP
Trigger: GGGGGACACATCCATCTTGCAGAGAAGTTTACAGAA...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAACAGGTCCAAAGACACTaGAGTTTTTACCAAGGCATA +
Preference number: 4 (lower is better)
Translates to: LRARKGATRRRVSSDPWEQVQRH*SFYQGI
Trigger: TATGCCTTGGTAAAAACTGCAGTGTCTTTGGACCTG...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCACTGCAAAGCCGATTCTaGTGTTTTGACGTAAGCATT +
Preference number: 4 (lower is better)
Translates to: CGDTARPVPRTTFQVRASLQSRF*CFDVSI
Trigger: AATGCTTACGTCAAAACAGCAGAATCGGCTTTGCAG...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGGTTCTCACTTCAGGTaGCTGAAGAGTTTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLGSHFR*LKSFPH
Trigger: GTGGGGGAAACTCTTCAGGCACCTGAAGTGAGAACC...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CAGGGCCGCATCAGTAAACACACACTTCAGTCGGTGGTGATTTGTGAAATAGGTAAGACAGACAAACACTaGGAAGGGGACCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: QGRISKHTLQSVVICEIGKTDKH*EGDPAS
Trigger: GCTGGCTGGGTCCCCTTCGCAGTGTTTGTCTGTCTT...ACCTATTTCACAAATCACCACCGACTGAAGTGTGTGTTTACTGATGCGGCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AATTTTTGCATGAACACTGAGGAAAGGCCCAAAGATCCATCTAGAGCAGGTGGGCCCTGCCATCACAGGTaGCACACACTCACATCAGGC +
Preference number: 4 (lower is better)
Translates to: NFCMNTEERPKDPSRAGGPCHHR*HTLTSG
Trigger: GCCTGATGTGAGTGTGTGGCACCTGTGATGGCAGGG...CCCACCTGCTCTAGATGGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGCTTCAGGGCAGGGAATaGAGTCTCCTTGATCTATTA +
Preference number: 4 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKLQGRE*SLLDLL
Trigger: TAATAGATCAAGGAGACTGCATTCCCTGCCCTGAAG...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TTCATCTATGTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCGTTGGTTTGAGTCCCTaGAGAAAATCCCACTCGGAG +
Preference number: 4 (lower is better)
Translates to: FIYVFSRSGQLPRPGRLSVGLSP*RKSHSE
Trigger: CTCCGAGTGGGATTTTCTGCAGGGACTCAAACCAAC...GCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGACATAGATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp TGCTGTTTTGACGTAAGCATTGGTAGTCCCTTACCTGCCGGAAGGGATCTTTTGTCGGAGTCTTCCCGTTaGCACTGCCGAGGATTTCTG +
Preference number: 4 (lower is better)
Translates to: CCFDVSIGSPLPAGRDLLSESSR*HCRGFL
Trigger: CAGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGA...CAAAAGATCCCTTCCGGCAGGTAAGGGACTACCAATGCTTACGTCAAAACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATATCCCTTTCATTTCCTaGGACTCAAAACGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYIPFIS*DSKRSL
Trigger: CAAACTGCGTTTTGAGTCCCAGGAAATGAAAGGGAT...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATTGTATTTCAACAGGTaGTCTTTGTCTCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVLYFNR*SLSLPV
Trigger: CACTGGAAGAGACAAAGACCACCTGTTGAAATACAA...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGATAGCTGTGAAGGAGTaGATCTGCAGAAACCATGCA +
Preference number: 4 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGIAVKE*ICRNHA
Trigger: TGCATGGTTTCTGCAGATCCACTCCTTCACAGCTAT...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTAATAGCTGTGAAGGAGTaGATCTGCAGAAACCATGCA +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLIAVKE*ICRNHA
Trigger: TGCATGGTTTCTGCAGATCCACTCCTTCACAGCTAT...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCTCCGCCTTCTCTTCATaGGAATGCACTCTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSSAFSS*ECTLLS
Trigger: TGAGAGAAGAGTGCATTCCCATGAAGAGAAGGCGGA...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TCTCGACCACCACTGAGTTGGTTTGAGTCCCTGCAGAAAATCCCACTCGGAGGATCCGCCTTCTCTTCATaGGAATGCACTCTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: SRPPLSWFESLQKIPLGGSAFSS*ECTLLS
Trigger: TGAGAGAAGAGTGCATTCCCATGAAGAGAAGGCGGA...TCCTCCGAGTGGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp AGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCCAGAGCTACACAGTTTaGCCCTCCGCCTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: RYFSLCFVCTFVWGLRGLQSYTV*PSAFSS
Trigger: TGAAGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTG...GAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp AATTTTTGCATGAACACTGAGGAAAGGCCCAAAGATCCATCTAGAGCAGGTGGGACCCTACTCCTCTTCTaGGGTCAGCCTCTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: NFCMNTEERPKDPSRAGGTLLLF*GQPLPS
Trigger: AGACGGCAGAGGCTGACCCCAGAAGAGGAGTAGGGT...CCCACCTGCTCTAGATGGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TGCTGTTTTGACGTAAGCATTGGTAGTCCCTTACCTGCCGGAAGGGATCTTTTGGTGGCATGGAGACTGTaGTCTTCTTCCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: CCFDVSIGSPLPAGRDLLVAWRL*SSSSQE
Trigger: CTCCTGGGAGGAAGAAGACCACAGTCTCCATGCCAC...CAAAAGATCCCTTCCGGCAGGTAAGGGACTACCAATGCTTACGTCAAAACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CTCCCGGGCTGTCCGAGACCTCATTCTCAGTTAAGGATGCAGAAGGAGATGAACCAGAAGACCAAAAACTaGGATGCTGCATCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: LPGCPRPHSQLRMQKEMNQKTKN*DAASPF
Trigger: GAAGGGAGATGCAGCATCCCAGTTTTTGGTCTTCTG...GTTCATCTCCTTCTGCATCCTTAACTGAGAATGAGGTCTCGGACAGCCCGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511904.1
CDS-3UTR CCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTACCACCAGGGCAAACTTaGTGTTGTAGCGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLPPGQT*CCSVLS
Trigger: AGAGAGCACGCTACAACACCAAGTTTGCCCTGGTGG...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTATTTTTCGTTGCTGCCTaGCTCTTGAGCGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLFFVAA*LLSEEA
Trigger: AGCCTCCTCGCTCAAGAGCCAGGCAGCAACGAAAAA...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCTCCCCTGACATTTCGCTTCTTCAGTaGTTTACATGCATCAGACAG +
Preference number: 4 (lower is better)
Translates to: VFSRSGQLPRPGRLSSPDISLLQ*FTCIRQ
Trigger: CTGTCTGATGCATGTAAACCACTGAAGAAGCGAAAT...GTCAGGGGAGCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGCTGAAGATGCTGCCGTaGAAGCCCGATTTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLLKMLP*KPDFAS
Trigger: AGAAGCGAAATCGGGCTTCCACGGCAGCATCTTCAG...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGACTCGCTCAGACTTTTTaGATGAGACAGATACTTCAG +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRLAQTF*MRQILQ
Trigger: CTGAAGTATCTGTCTCATCCAAAAAGTCTGAGCGAG...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAACTCGCTCAGACTTTTTaGATGAGACAGATACTTCAG +
Preference number: 4 (lower is better)
Translates to: LRARKGATRRRVSSDPWELAQTF*MRQILQ
Trigger: CTGAAGTATCTGTCTCATCCAAAAAGTCTGAGCGAG...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCACACATACTCCTTTTTaGCAGTCACTCCTCGCTCAG +
Preference number: 4 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLTHTPF*QSLLAQ
Trigger: CTGAGCGAGGAGTGACTGCCAAAAAGGAGTATGTGT...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TTGGATGAGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACGGTGAACCTCCCTTCTaGCCTCCGGGAAAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: LDETDTSVCVSSALSYGDGEPPF*PPGKPK
Trigger: CTTGGGCTTTCCCGGAGGCCAGAAGGGAGGTTCACC...GTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGTTGGGTTTGAAGGGTTaGAAGCATGGCAGCTCACAC +
Preference number: 4 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSELGLKG*KHGSSH
Trigger: GTGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAA...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CGCTCAGACTTTTTGGATGAGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTCAGCTCACGTTGACGTaGGCGTGGTGTCGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: RSDFLDETDTSVCVSSALQLTLT*AWCRFP
Trigger: GGGGAAGCGACACCACGCCCACGTCAACGTGAGCTG...AAGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp CGCTCAGACTTTTTGGATGAGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTTTCAGGCAGTCAGGGTaGAAGGCCGCTGGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: RSDFLDETDTSVCVSSALFRQSG*KAAGQD
Trigger: GTCCTGCCCAGCGGCCTTCCACCCTGACTGCCTGAA...AAGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTAACCCAAATGATATCCTaGAAGTGCAGCTTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLTQMIS*KCSFFP
Trigger: TGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGT...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCTTGGGGGAACATTTTTaGGATGGCAAACTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: LQFVFRLHFRMGTPRARLLGEHF*DGKLLP
Trigger: CGGCAGAAGTTTGCCATCCCAAAAATGTTCCCCCAA...GAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp TGGCACACATACTCCTTTTTGGCAGTCACTCCTCGCTCAGACTTTTTGGATGAGCTTGATGTGCTTGTATaGTGGGGGCTTGCGCTCGCT +
Preference number: 4 (lower is better)
Translates to: WHTYSFLAVTPRSDFLDELDVLV*WGLALA
Trigger: AGCGAGCGCAAGCCCCCACCATACAAGCACATCAAG...CTCATCCAAAAAGTCTGAGCGAGGAGTGACTGCCAAAAAGGAGTATGTGTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp TCCTCGTCGATCAGCTCCCCAACGTACTCGTTAACAAATTCTCCCTTTCTGATGTTGGTCTCTGGGTACTaGCGCTTGGTGAAGCACTGG +
Preference number: 4 (lower is better)
Translates to: SSSISSPTYSLTNSPFLMLVSGY*RLVKHW
Trigger: CCAGTGCTTCACCAAGCGCCAGTACCCAGAGACCAA...CATCAGAAAGGGAGAATTTGTTAACGAGTACGTTGGGGAGCTGATCGACGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTAGAGAGTAGTTTCCTTTaGGGCCAGCGTCTATTATAC +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLESSFL*GQRLLY
Trigger: GTATAATAGACGCTGGCCCCAAAGGAAACTACTCTC...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGGAGAGTAGTTTCCTTTaGGGCCAGCGTCTATTATAC +
Preference number: 4 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGESSFL*GQRLLY
Trigger: GTATAATAGACGCTGGCCCCAAAGGAAACTACTCTC...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AATGATCACAATGGCAGTTTCGAGGAATCCAGGGTCAGTCCTCACACGGGCCTCGAATTGGGGCAGAGGTaGCAAAATGAAGTCGAAGGT +
Preference number: 4 (lower is better)
Translates to: NDHNGSFEESRVSPHTGLELGQR*QNEVEG
Trigger: ACCTTCGACTTCATTTTGCCACCTCTGCCCCAATTC...GAGGCCCGTGTGAGGACTGACCCTGGATTCCTCGAAACTGCCATTGTGATCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAAAGGCTGTCCCGTCCTaGTGCTCCTTACAGAACGAA +
Preference number: 4 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLKAVPS*CSLQNE
Trigger: TTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTT...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CAGGGCCGCATCAGTAAACACACACTTCAGTCGGTGGTGATTTGTGAAATAGGTAGATGGAAGCCACTCTaGGTGGCAGGAGAGCTAGAC +
Preference number: 4 (lower is better)
Translates to: QGRISKHTLQSVVICEIGRWKPL*VAGELD
Trigger: GTCTAGCTCTCCTGCCACCCAGAGTGGCTTCCATCT...ACCTATTTCACAAATCACCACCGACTGAAGTGTGTGTTTACTGATGCGGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGAGTGGGTGTCATACCTaGCCTAGACCAGTGCCCATA +
Preference number: 4 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLSGCHT*PRPVPI
Trigger: TATGGGCACTGGTCTAGGCCAGGTATGACACCCACT...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGACAGCTCGTTTCCCCTaGGTCCTCTGTGTAGTTAAC +
Preference number: 4 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSETARFP*VLCVVN
Trigger: GTTAACTACACAGAGGACCCAGGGGAAACGAGCTGT...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAACTATTTTCCCCCAACTaGCAAGTCTCAACTCTCTAT +
Preference number: 4 (lower is better)
Translates to: LRARKGATRRRVSSDPWELFSPN*QVSTLY
Trigger: ATAGAGAGTTGAGACTTGCCAGTTGGGGGAAAATAG...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AGTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCAAAAATGCGGACACCTaGGGCAGGACACCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SVYDDTPPAAASWNITSFKNADT*GRTPGC
Trigger: GCAGCCTGGTGTCCTGCCCCAGGTGTCCGCATTTTT...GAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR CCA 90 bp GCTATCAGACAGGAGCCTCTCCAGCGAGGGGAATCCGTGGCTTTACAGCCCTCCAGATGTAACTACACCTaGAGTCAGTATGCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: AIRQEPLQRGESVALQPSRCNYT*SQYAEK
Trigger: TTTTTCAGCATACTGACTCCAGGTGTAGTTACATCT...GGAGGGCTGTAAAGCCACGGATTCCCCTCGCTGGAGAGGCTCCTGTCTGATAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TATTACATCATTCTAAGTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACGGGAGGAGCCTGGTCTaGCCGACTGCAGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: YYIILSAVQSSWVQIQLDGRSLV*PTADSR
Trigger: CCTGCTGTCTGCAGTCGGCCAGACCAGGCTCCTCCC...GTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCACTTAGAATGATGTAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR CCA 90 bp ATCCTGCAACATTTGAGCAGAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATAGCCATTTGTGGAGGTaGCACATTCACCTGTACGGT +
Preference number: 4 (lower is better)
Translates to: ILQHLSRANRGTQPALSHSHLWR*HIHLYG
Trigger: ACCGTACAGGTGAATGTGCCACCTCCACAAATGGCT...ATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTCTGCTCAAATGTTGCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GGCCCCCAGTTATCATCTCCTCATAAACATGACAAAAACAGGACCCATGTCTACACCATGGCAGAGACCTaGCCAGAAGTGCCGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GPQLSSPHKHDKNRTHVYTMAET*PEVPPS
Trigger: AGAAGGCGGCACTTCTGGCCAGGTCTCTGCCATGGT...GTAGACATGGGTCCTGTTTTTGTCATGTTTATGAGGAGATGATAACTGGGGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp AACAGGTCTCGACCACCACTGAGTTGGTTTGAGTCCCTGCAGAAAATCCCACTCCGACCACCACTGAGTTaGTTTGAGTCCCTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: NRSRPPLSWFESLQKIPLRPPLS*FESLQK
Trigger: TTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCG...GAGTGGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCGAGACCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp GGCCTCGACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGAGGGTGTGTGTCAGTGTaGACCTCAAACAGCAATTCT +
Preference number: 4 (lower is better)
Translates to: GLDPATLASCITLNQSLRGCVSV*TSNSNS
Trigger: AGAATTGCTGTTTGAGGTCCACACTGACACACACCC...TCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTCGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420906.6
3UTR CAA 72 bp CACACCGCATCATTTTACCTTTTGACGGCCTTGGGTTaGAAGGGTTGGAAGCATGGCAGCTCACACAGCTGT +
Preference number: 4 (lower is better)
Translates to: HTASFYLLTALG*KGWKHGSSHSC
Trigger: ACAGCTGTGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAAGGCCGTCAAAAGGTAAAATGATGCGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
3UTR CAA 72 bp CCTAGACCATCTTTGGGGCTATGTATCCTGCAACATTaGAGCAGAGCCAATAGAGGAACCCAACCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: PRPSLGLCILQH*SRANRGTQPAL
Trigger: GAGGGCTGGTTGGGTTCCTCTATTGGCTCTGCTCAAATGTTGCAGGATACATAGCCCCAAAGATGGTCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCTTGTCCATTTTCTTCTaGCTGAGACACATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLLSIFF*LRHISS
Trigger: GCTGCTGATGTGTCTCAGTCAGAAGAAAATGGACAA...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GGCCTCGACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATTGTCCATTTTCTTCTaGCTGAGACACATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GLDPATLASCITLNQSLRLSIFF*LRHISS
Trigger: GCTGCTGATGTGTCTCAGTCAGAAGAAAATGGACAA...TCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTCGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR TCA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGATTGTCCATTTTCTTCTaGCTGAGACACATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRLSIFF*LRHISS
Trigger: GCTGCTGATGTGTCTCAGTCAGAAGAAAATGGACAA...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp ACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCAAAGAACTGTACGTaGTACTGGCGTGCACTCTTT +
Preference number: 4 (lower is better)
Translates to: TSVCVSSALSYGDSEGSSPKNCT*YWRALF
Trigger: AAAGAGTGCACGCCAGTATCACGTACAGTTCTTTGG...AGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR TCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGCCAAAGAACTGTACGTaGTACTGGCGTGCACTCTTT +
Preference number: 4 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKPKNCT*YWRALF
Trigger: AAAGAGTGCACGCCAGTATCACGTACAGTTCTTTGG...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGTTCTTCACTGACTCCTaGGGATTCTGCCATTTCTCC +
Preference number: 4 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSEFFTDS*GFCHFS
Trigger: GGAGAAATGGCAGAATCCTCAGGAGTCAGTGAAGAA...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CAGGGCCGCATCAGTAAACACACACTTCAGTCGGTGGTGATTTGTGAAATAGGTGCCTCTGCCGTCTTTTaGGGAGTACTCTTCCCTATG +
Preference number: 4 (lower is better)
Translates to: QGRISKHTLQSVVICEIGASAVF*GVLFPM
Trigger: CATAGGGAAGAGTACTCCTCAAAAGACGGCAGAGGC...ACCTATTTCACAAATCACCACCGACTGAAGTGTGTGTTTACTGATGCGGCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp TGCTGTTTTGACGTAAGCATTGGTAGTCCCTTACCTGCCGGAAGGGATCTTTTGGACTCCACTGTGACCTaGGCAGCTCTTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: CCFDVSIGSPLPAGRDLLDSTVT*AALQSP
Trigger: AGGAGATTGAAGAGCTGCTCAGGTCACAGTGGAGTC...CAAAAGATCCCTTCCGGCAGGTAAGGGACTACCAATGCTTACGTCAAAACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GGCTTCCCTCTGAAGCTTAATTTCACGAAAACGAGCTTCAGCTTCTTGCAGTGCCAGCAGACTCCACTGTaGCCTGAGCAGCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: GFPLKLNFTKTSFSFLQCQQTPL*PEQLFN
Trigger: ATTGAAGAGCTGCTCAGGTCACAGTGGAGTCTGCTG...GCACTGCAAGAAGCTGAAGCTCGTTTTCGTGAAATTAAGCTTCAGAGGGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp TTCATCTATGTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCTGGCCGTTTTGTCAGTaGTTGTGTCTCTCTTCCGAA +
Preference number: 4 (lower is better)
Translates to: FIYVFSRSGQLPRPGRLSWPFCQ*LCLSSE
Trigger: TTCGGAAGAGAGACACAATCACTGACAAAACGGCCA...GCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGACATAGATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR TCA 90 bp AATTATCTACACGTATCAAACTGTAAAGCAGCCCCAGTCCCACCATCCGTGAACGCTAAACCCAAGAGCTaGAGATGCTGCCGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: NYLHVSNCKAAPVPPSVNAKPKS*RCCRGS
Trigger: GCTTCCACGGCAGCATCTTCAGCTCTTGGGTTTAGC...GTTCACGGATGGTGGGACTGGGGCTGCTTTACAGTTTGATACGTGTAGATAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACACACACGAAACATGAGTaGATCCCTGAGGCACACTCG +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTHTKHE*IPEAHS
Trigger: CGAGTGTGCCTCAGGGATTCACTCATGTTTCGTGTG...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GTAGTTCCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTCCCAGCCACACGAAACATGAGTaGATCCCTGAGGCACACTCG +
Preference number: 4 (lower is better)
Translates to: VVPKFHPNDILEVQLLPSHTKHE*IPEAHS
Trigger: CGAGTGTGCCTCAGGGATTCACTCATGTTTCGTGTG...GCTGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGGAACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCAGTTGGAGGCGATCACTaGGCATCCTGCTGCCAGACA +
Preference number: 4 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSVGGDH*ASCCQT
Trigger: TGTCTGGCAGCAGGATGCTCAGTGATCGCCTCCAAC...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACACATTTCAGAGGAGACAAATTCTCCCTTTCTaGTGTCCCTCTTGGCGACCA +
Preference number: 4 (lower is better)
Translates to: DEFLATLGKSLRYTFQRRQILPF*CPSWRP
Trigger: TGGTCGCCAAGAGGGACATCAGAAAGGGAGAATTTG...TCTCCTCTGAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTACAAATTCTCCCTTTCTaGTGTCCCTCTTGGCGACCA +
Preference number: 4 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLQILPF*CPSWRP
Trigger: TGGTCGCCAAGAGGGACATCAGAAAGGGAGAATTTG...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp TGCTGTTTTGACGTAAGCATTGGTAGTCCCTTACCTGCCGGAAGGGATCTTTTGGCATGTAGAAGTGGGTaGTGTCGTTCTCGTGTGCGT +
Preference number: 4 (lower is better)
Translates to: CCFDVSIGSPLPAGRDLLACRSG*CRSRVR
Trigger: ACGCACACGAGAACGACATCACCCACTTCTACATGC...CAAAAGATCCCTTCCGGCAGGTAAGGGACTACCAATGCTTACGTCAAAACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GGCTTCCCTCTGAAGCTTAATTTCACGAAAACGAGCTTCAGCTTCTTGCAGTGCGCATGTAGAAGTGGGTaGTGTCGTTCTCGTGTGCGT +
Preference number: 4 (lower is better)
Translates to: GFPLKLNFTKTSFSFLQCACRSG*CRSRVR
Trigger: ACGCACACGAGAACGACATCACCCACTTCTACATGC...GCACTGCAAGAAGCTGAAGCTCGTTTTCGTGAAATTAAGCTTCAGAGGGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCACAGTCTTGGTGCTTCTaGCCGATGCCGCCCCTAAGT +
Preference number: 4 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSQSWCF*PMPPLS
Trigger: ACTTAGGGGCGGCATCGGTCAGAAGCACCAAGACTG...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATGCTATTTGCCCTCTGTaGCTCTCCGCCAGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNAICPL*LSASPS
Trigger: GGAGGGGCTGGCGGAGAGTCACAGAGGGCAAATAGC...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TCCACTGAGTTATCAACGGGTATTGTAGAGACATTCAAAGTTAGTGTTACTTGCGAGTGGCGACGGCGCTaGGAGCCAGAAAGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: STELSTGIVETFKVSVTCEWRRR*EPERGQ
Trigger: TTGCCCCCTTTCTGGCTCTCAGCGCCGTCGCCACTC...GCAAGTAACACTAACTTTGAATGTCTCTACAATACCCGTTGATAACTCAGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACAAAAAGCACCTGCTGCTaGATGTTCTCTCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTKSTCC*MFSPSL
Trigger: GAGGGAGGGAGAGAACATTCAGCAGCAGGTGCTTTT...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp AGAGTGGGAGGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGGGAGAAGTTAGAGTCTaGACTGGAAAGCACTACTCC +
Preference number: 4 (lower is better)
Translates to: RVGGNLDIRRNSSVAVTLGEVRV*TGKHYS
Trigger: GGAGTAGTGCTTTCCAGTTCAGACTCTAACTTCTCC...CAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGAAGGAGCATAAATCTATaGGCCGATCCAGTATTTTCT +
Preference number: 4 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRRSINL*ADPVFS
Trigger: AGAAAATACTGGATCGGCTCATAGATTTATGCTCCT...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CAGGGCCGCATCAGTAAACACACACTTCAGTCGGTGGTGATTTGTGAAATAGGTGATGCCAAGGAATCCTaGGGGATTGGGGCGGTTTTT +
Preference number: 4 (lower is better)
Translates to: QGRISKHTLQSVVICEIGDAKES*GIGAVF
Trigger: AAAAACCGCCCCAATCCCTCAGGATTCCTTGGCATC...ACCTATTTCACAAATCACCACCGACTGAAGTGTGTGTTTACTGATGCGGCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATGGTATGGTGAGGCTGTaGCACCCCGTGGACACAGCA +
Preference number: 4 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHGMVRL*HPVDTA
Trigger: TGCTGTGTCCACGGGGTGTCACAGCCTCACCATACC...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCATTTGTATTTAATTTCTaGCGGGGCATTTCACACCTC +
Preference number: 4 (lower is better)
Translates to: CGDTARPVPRTTFQVRASFVFNF*RGISHL
Trigger: GAGGTGTGAAATGCCCCGTCAGAAATTAAATACAAA...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCATCTATCAGTTATGGGCTACCCTGGTTATTCAGCTaGTGCCAATGTCATGCTGCT +
Preference number: 4 (lower is better)
Translates to: EGAPMRWLTSNASISYGLPWLFS*CQCHAA
Trigger: AGCAGCATGACATTGGCATCAGCTGAATAACCAGGG...TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCAGATATATAAAGGCTTaGTGGCCCAATGGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSRYIKA*WPNGSQ
Trigger: CTGAGAGCCATTGGGCCATCAAGCCTTTATATATCT...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCTACTCAAGACAGCACTaGGATGTAACTACACCTGGA +
Preference number: 4 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSYSRQH*DVTTPG
Trigger: TCCAGGTGTAGTTACATCTCAGTGCTGTCTTGAGTA...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GACCTCTATTGCCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGACCCAGACGCAGTGACTaGTGTCAGCCATCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: DLYCQYVHYLKMPPYYNGPRRSD*CQPSEE
Trigger: CTCCTCTGATGGCTGACATCAGTCACTGCGTCTGGG...TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp AATTTTTGCATGAACACTGAGGAAAGGCCCAAAGATCCATCTAGAGCAGGTGGGGAAAAGTGCAGGGACTaGGCGGACACAGACTCTGTC +
Preference number: 4 (lower is better)
Translates to: NFCMNTEERPKDPSRAGGEKCRD*ADTDSV
Trigger: GACAGAGTCTGTGTCCGCTCAGTCCCTGCACTTTTC...CCCACCTGCTCTAGATGGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATATACACATCTGCACTGGCAGTaGGCACCAATGCTGCGCTTA +
Preference number: 4 (lower is better)
Translates to: DPATLASCITLNQSLRYTHLHWQ*APMLRL
Trigger: TAAGCGCAGCATTGGTGCTCACTGCCAGTGCAGATG...TGTATATCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp AGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGAAGGCGGAGGAGTGGTCGCTaGGGATTCAGAGTGGCAAGC +
Preference number: 4 (lower is better)
Translates to: RNMMHTMGSMHHLQNVGRRRSGR*GFRVAS
Trigger: GCTTGCCACTCTGAATCCTCAGCGACCACTCCTCCG...CCTTCCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp AGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGAAGGCAGTCCCACCATCCGTaGACAGGTCTCGACCACCAC +
Preference number: 4 (lower is better)
Translates to: RNMMHTMGSMHHLQNVGRQSHHP*TGLDHH
Trigger: GTGGTGGTCGAGACCTGTTCACGGATGGTGGGACTG...CCTTCCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp GTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCTCCCCTGACAAGCAACAACTCAAGTaGATAACCGGACCAAAATTA +
Preference number: 4 (lower is better)
Translates to: VFSRSGQLPRPGRLSSPDKQQLK*ITGPKL
Trigger: TAATTTTGGTCCGGTTATTCACTTGAGTTGTTGCTT...GTCAGGGGAGCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp CAGACTTTTTGGATGAGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGTCGCGCAACAGGGCTATaGGGCCCGAGATGTCCACAG +
Preference number: 4 (lower is better)
Translates to: QTFWMRQILQFVFRLHFRRATGL*GPRCPQ
Trigger: CTGTGGACATCTCGGGCCGCATAGCCCTGTTGCGCG...ACGAAAGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAAAAAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGACAGAAAGGGGACTCTaGTTGATGCTAAATTCCATC +
Preference number: 4 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWTERGL*LMLNSI
Trigger: GATGGAATTTAGCATCAAGCAGAGTCCCCTTTCTGT...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCAAGGATTTCTGGTGCCTaGTTCATCTTTATGCACTTT +
Preference number: 4 (lower is better)
Translates to: CGDTARPVPRTTFQVRASRISGA*FIFMHF
Trigger: AAAGTGCATAAAGATGAAGCAGGCACCAGAAATCCT...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AGTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCTCTTCCCGTTGGCACTaGCGAGGATTTCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: SVYDDTPPAAASWNITSFSSRWH*RGFLVP
Trigger: AGGCACCAGAAATCCTCGGCAGTGCCAACGGGAAGA...GAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000678714.1
CDS-3UTR GCA 90 bp AATTTTTGCATGAACACTGAGGAAAGGCCCAAAGATCCATCTAGAGCAGGTGGGTGGCCGTTAAACTTCTaGATGACCCCCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: NFCMNTEERPKDPSRAGGWPLNF*MTPSCR
Trigger: CCTGCAGGAGGGGGTCATGCAGAAGTTTAACGGCCA...CCCACCTGCTCTAGATGGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTACAGTTTGGCATCGTGTaGGCCGGGTTCTCCATTAAA +
Preference number: 4 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLQFGIV*AGFSIK
Trigger: TTTAATGGAGAACCCGGCGCACACGATGCCAAACTG...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TGCTGTTTTGACGTAAGCATTGGTAGTCCCTTACCTGCCGGAAGGGATCTTTTGGCTTCGACAAGGCCCTaGTCCAGCAAGGAGTCATAT +
Preference number: 4 (lower is better)
Translates to: CCFDVSIGSPLPAGRDLLASTRP*SSKESY
Trigger: ATATGACTCCTTGCTGGAGCAGGGCCTTGTCGAAGC...CAAAAGATCCCTTCCGGCAGGTAAGGGACTACCAATGCTTACGTCAAAACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGTACGTGATACTGGCGTaGACTCTTTTTCTGACCTTT +
Preference number: 4 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWYVILA*TLFLTF
Trigger: AAAGGTCAGAAAAAGAGTGCACGCCAGTATCACGTA...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CATTGCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTTACGTGATACTGGCGTaGACTCTTTTTCTGACCTTT +
Preference number: 4 (lower is better)
Translates to: HCCHHLQGQLLTRMEKKRYVILA*TLFLTF
Trigger: AAAGGTCAGAAAAAGAGTGCACGCCAGTATCACGTA...ACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GGTTTGAGTCCCTGCAGAAAATCCCACTCGGAGGAGTGGTCGCTGAGGATTCAGTACGTGATACTGGCGTaGACTCTTTTTCTGACCTTT +
Preference number: 4 (lower is better)
Translates to: GLSPCRKSHSEEWSLRIQYVILA*TLFLTF
Trigger: AAAGGTCAGAAAAAGAGTGCACGCCAGTATCACGTA...CTGAATCCTCAGCGACCACTCCTCCGAGTGGGATTTTCTGCAGGGACTCAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp GAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCATCTATCAGTTATGGGCTAGCTCCTCCACTGACATaGTTGCAGCTTCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: EGAPMRWLTSNASISYGLAPPLT*LQLLLL
Trigger: AAGCAGAAGAAGCTGCAAGCATGTCAGTGGAGGAGC...TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TTACTCACACTGCAGCGTGGGCAGCTAAATGGCCTTCATACCAATGCCATGGTTGCTCCTCCACTGACATaGTTGCAGCTTCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: LLTLQRGQLNGLHTNAMVAPPLT*LQLLLL
Trigger: AAGCAGAAGAAGCTGCAAGCATGTCAGTGGAGGAGC...AACCATGGCATTGGTATGAAGGCCATTTAGCTGCCCACGCTGCAGTGTGAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp CCCAATGGGTGTGTGTCAGTGTGGACCTCAAACAGCAATTCTCATGGTCACCTAAAGACTCTGCAGCAATaGCAGCCTCCTTGGCTACTT +
Preference number: 4 (lower is better)
Translates to: PNGCVSVWTSNSNSHGHLKTLQQ*QPPWLL
Trigger: AAGTAGCCAAGGAGGCTGGCATTGCTGCAGAGTCTT...TAGGTGACCATGAGAATTGCTGTTTGAGGTCCACACTGACACACACCCATTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420906.6
CDS-3UTR GCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTATTCTCCCAAAGACTCTaGAGCAATGCCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLFSQRL*SNASLL
Trigger: AAGGAGGCTGGCATTGCTGCAGAGTCTTTGGGAGAA...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCATCTATCAGTTATGGGCTATTCTCCCAAAGACTCTaGAGCAATGCCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: EGAPMRWLTSNASISYGLFSQRL*SNASLL
Trigger: AAGGAGGCTGGCATTGCTGCAGAGTCTTTGGGAGAA...TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TTACTCACACTGCAGCGTGGGCAGCTAAATGGCCTTCATACCAATGCCATGGTTTTCTCCCAAAGACTCTaGAGCAATGCCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: LLTLQRGQLNGLHTNAMVFSQRL*SNASLL
Trigger: AAGGAGGCTGGCATTGCTGCAGAGTCTTTGGGAGAA...AACCATGGCATTGGTATGAAGGCCATTTAGCTGCCCACGCTGCAGTGTGAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCATTCTCTTCATGGGAATaGACTCTTCTCTCACAGACT +
Preference number: 4 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPFSSWE*TLLSQT
Trigger: AGTCTGTGAGAGAAGAGTGCATTCCCATGAAGAGAA...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GGGCTGTCCGAGACCTCATTCTCAGTTAAGGATGCAGAAGGAGATGAACTTTTGTCTGGGGTCAGCCTCTaGCGTCTTTTGAGGAGTACT +
Preference number: 4 (lower is better)
Translates to: GLSETSFSVKDAEGDELLSGVSL*RLLRST
Trigger: AGTACTCCTCAAAAGACGGCAGAGGCTGACCCCAGA...CAAAAGTTCATCTCCTTCTGCATCCTTAACTGAGAATGAGGTCTCGGACAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511904.1
CDS-3UTR GCA 90 bp CGACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATATACTCTGGGGTCAGCCTCTaGCGTCTTTTGAGGAGTACT +
Preference number: 4 (lower is better)
Translates to: RPRYTGLMHYSKSKPSIYSGVSL*RLLRST
Trigger: AGTACTCCTCAAAAGACGGCAGAGGCTGACCCCAGA...GTATATCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp GACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACACATTTCAGAGGAGAGACCAAAAACTGGGATaGTGCATCTCCCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: DEFLATLGKSLRYTFQRRDQKLG*CISLPA
Trigger: AGCAGGAAGGGAGATGCAGCATCCCAGTTTTTGGTC...TCTCCTCTGAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCATCTATCAGTTATGGGCTAGACCAAAAACTGGGATaGTGCATCTCCCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: EGAPMRWLTSNASISYGLDQKLG*CISLPA
Trigger: AGCAGGAAGGGAGATGCAGCATCCCAGTTTTTGGTC...TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGCTTGGTGTTGTAGCGTaGTCTCTGCTTCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLLGVVA*SLLLTQ
Trigger: CTGAGTGAGAAGCAGAGAGCACGCTACAACACCAAG...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTACTCTTCCGAAGACTGTaGTTGTCCGTCCTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLLFRRL*LSVLSL
Trigger: AAGACTCAGGACGGACAAGCACAGTCTTCGGAAGAG...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCATCTATCAGTTATGGGCTACTCTTCCGAAGACTGTaGTTGTCCGTCCTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: EGAPMRWLTSNASISYGLLFRRL*LSVLSL
Trigger: AAGACTCAGGACGGACAAGCACAGTCTTCGGAAGAG...TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCACAGCCCTGCAGTCATTaGAGAACCAGCTGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSQPCSH*RTSCRQ
Trigger: CTGACGGCAGCTGGTTCTGCAATGACTGCAGGGCTG...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACAGGGATGGCAAACTTCTaGCGGCCACCATCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTGMANF*RPPSVV
Trigger: AACTACAGATGGTGGCCGGCAGAAGTTTGCCATCCC...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACATCGTTCTCGTGTGCGTaGTTGATTCTCGCCATGCAC +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTSFSCA*LILAMH
Trigger: GTGCATGGCGAGAATCAAGCACGCACACGAGAACGA...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCAATGAAGTCGAAGGTTTaGCACACACGTCACAATGAT +
Preference number: 4 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPMKSKV*HTRHND
Trigger: ATCATTGTGACGTGTGTGGCAAACCTTCGACTTCAT...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CATTGCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTATGAAGTCGAAGGTTTaGCACACACGTCACAATGAT +
Preference number: 4 (lower is better)
Translates to: HCCHHLQGQLLTRMEKKRMKSKV*HTRHND
Trigger: ATCATTGTGACGTGTGTGGCAAACCTTCGACTTCAT...ACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACAGCTGTCCCGTCCTGGTaGTCCTTACAGAACGAATTG +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTAVPSW*SLQNEL
Trigger: CAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGC...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TCCTCGTCGATCAGCTCCCCAACGTACTCGTTAACAAATTCTCCCTTTCTGATGGCTGTCCCGTCCTGGTaGTCCTTACAGAACGAATTG +
Preference number: 4 (lower is better)
Translates to: SSSISSPTYSLTNSPFLMAVPSW*SLQNEL
Trigger: CAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGC...CATCAGAAAGGGAGAATTTGTTAACGAGTACGTTGGGGAGCTGATCGACGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGTGATCAGCAGAGACTaGATCTTCCATCACCAGACC +
Preference number: 4 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLVISRD*IFHHQT
Trigger: GGTCTGGTGATGGAAGATGCAGTCTCTGCTGATCAC...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CGCTCAGACTTTTTGGATGAGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTGCACCTCTCAGTAGGTaGCCTGGCAGAGGGCACATG +
Preference number: 4 (lower is better)
Translates to: RSDFLDETDTSVCVSSALAPLSR*PGRGHM
Trigger: CATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGC...AAGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGAGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATGCCCCCTTCTCAGGGTaGTCCAGACTTCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNAPFSG*SRLPRV
Trigger: GACCCTGGGAAGTCTGGAGCACCCTGAGAAGGGGGC...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACAGGTCCAAAGACACTaGAGTTTTTACCAAGGCATA +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLQVQRH*SFYQGI
Trigger: TATGCCTTGGTAAAAACTGCAGTGTCTTTGGACCTG...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CATTGCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTCAGGTCCAAAGACACTaGAGTTTTTACCAAGGCATA +
Preference number: 4 (lower is better)
Translates to: HCCHHLQGQLLTRMEKKRQVQRH*SFYQGI
Trigger: TATGCCTTGGTAAAAACTGCAGTGTCTTTGGACCTG...ACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACTGCAAAGCCGATTCTaGTGTTTTGACGTAAGCATT +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLLQSRF*CFDVSI
Trigger: AATGCTTACGTCAAAACAGCAGAATCGGCTTTGCAG...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGATGCTGGTTTCGGATaGCAAGGAATCCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLDAGFG*QGILRD
Trigger: ATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATC...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TGCTGTTTTGACGTAAGCATTGGTAGTCCCTTACCTGCCGGAAGGGATCTTTTGGGGTTTAGGTGCAGATaGTGGTTTCGGATGCCAAGG +
Preference number: 4 (lower is better)
Translates to: CCFDVSIGSPLPAGRDLLGFRCR*WFRMPR
Trigger: CCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC...CAAAAGATCCCTTCCGGCAGGTAAGGGACTACCAATGCTTACGTCAAAACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TGTGCACTACCTGAAGATGCCACCCTATTACAATGGAGTACTTACGTTTTTAGACGTGCAAAGCCCTGCTaGAGCTCTGGACAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: CALPEDATLLQWSTYVFRRAKPC*SSGQPP
Trigger: TGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACG...TCTAAAAACGTAAGTACTCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ATCCTGCAACATTTGAGCAGAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATGCCTTTTCCTTACCATaGAAAAATGCGGACACCTGG +
Preference number: 4 (lower is better)
Translates to: ILQHLSRANRGTQPALSHAFSLP*KNADTW
Trigger: CCAGGTGTCCGCATTTTTGCATGGTAAGGAAAAGGC...ATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTCTGCTCAAATGTTGCAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GCTATCAGACAGGAGCCTCTCCAGCGAGGGGAATCCGTGGCTTTACAGCCCTCCCCTAAGCATCTTACATaGGTTACATTACTTAATGGT +
Preference number: 4 (lower is better)
Translates to: AIRQEPLQRGESVALQPSPKHLT*VTLLNG
Trigger: ACCATTAAGTAATGTAACGCATGTAAGATGCTTAGG...GGAGGGCTGTAAAGCCACGGATTCCCCTCGCTGGAGAGGCTCCTGTCTGATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AATTTTTGCATGAACACTGAGGAAAGGCCCAAAGATCCATCTAGAGCAGGTGGGAGTGCTGAGTTCACTTaGCCCTGCCCACCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: NFCMNTEERPKDPSRAGGSAEFT*PCPPSQ
Trigger: TTGGGAAGGTGGGCAGGGGCAAGTGAACTCAGCACT...CCCACCTGCTCTAGATGGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGATTCAGGACCTCTATTaGCAATATGTGCACTACCTG +
Preference number: 4 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKIQDLY*QYVHYL
Trigger: CAGGTAGTGCACATATTGGCAATAGAGGTCCTGAAT...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGTCCCTCATTTGGAAATaGTTATACTGGCTTCCATGC +
Preference number: 4 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKSLIWK*LYWLPC
Trigger: GCATGGAAGCCAGTATAAGCATTTCCAAATGAGGGA...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ATCCTGCAACATTTGAGCAGAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATGTTGGAGAGACACCCTaGTGTAAGAATGTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: ILQHLSRANRGTQPALSHVGETP*CKNVPK
Trigger: CTTTGGGACATTCTTACAGCAGGGTGTCTCTCCAAC...ATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTCTGCTCAAATGTTGCAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TGCTCTATAGAAGCAACTGATGCAGAGGTTGGTGTACATAACCTGATTACAGTACCTGGTCTGGCCGACTaGAGACAGCAGGCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: CSIEATDAEVGVHNLITVPGLAD*RQQAVH
Trigger: GTGCACAGCCTGCTGTCTGCAGTCGGCCAGACCAGG...TACTGTAATCAGGTTATGTACACCAACCTCTGCATCAGTTGCTTCTATAGAGCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGAGTCGTCTTCTAACCTaGACAGGCTTTTGTGTAGCC +
Preference number: 4 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKSRLLT*TGFCVA
Trigger: GGCTACACAAAAGCCTGTGCAGGTTAGAAGACGACT...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TTACTCACACTGCAGCGTGGGCAGCTAAATGGCCTTCATACCAATGCCATGGTTGCTCAACTGACACTGTaGCCTTTCAGAACCAACGCA +
Preference number: 4 (lower is better)
Translates to: LLTLQRGQLNGLHTNAMVAQLTL*PFRTNA
Trigger: TGCGTTGGTTCTGAAAGGGCACAGTGTCAGTTGAGC...AACCATGGCATTGGTATGAAGGCCATTTAGCTGCCCACGCTGCAGTGTGAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp GGCCTCGACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATGCTATCATGTACTCTaGAAGTCCAGAACACAGGAG +
Preference number: 4 (lower is better)
Translates to: GLDPATLASCITLNQSLRCYHVL*KSRTQE
Trigger: CTCCTGTGTTCTGGACTTGCAGAGTACATGATAGCA...TCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTCGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp AATTATCTACACGTATCAAACTGTAAAGCAGCCCCAGTCCCACCATCCGTGAACGGCCTGTCCAACCCTTaGCTCACTACCCTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: NYLHVSNCKAAPVPPSVNGLSNP*LTTLFQ
Trigger: TTGGAACAGGGTAGTGAGGCAAGGGTTGGACAGGCC...GTTCACGGATGGTGGGACTGGGGCTGCTTTACAGTTTGATACGTGTAGATAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp AATTATCTACACGTATCAAACTGTAAAGCAGCCCCAGTCCCACCATCCGTGAACAGACCTGGCCAGAAGTaGCGCCTTCTGACTCAGCAA +
Preference number: 4 (lower is better)
Translates to: NYLHVSNCKAAPVPPSVNRPGQK*RLLTQQ
Trigger: TTGCTGAGTCAGAAGGCGGCACTTCTGGCCAGGTCT...GTTCACGGATGGTGGGACTGGGGCTGCTTTACAGTTTGATACGTGTAGATAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAACTGCCGAGGATTTCTaGTGCCTGCTTCATCTTTAT +
Preference number: 4 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRTAEDF*CLLHLY
Trigger: ATAAAGATGAAGCAGGCACCAGAAATCCTCGGCAGT...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AGTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCTCGGAGTCTTCCCGTTaGCACTGCCGAGGATTTCTG +
Preference number: 4 (lower is better)
Translates to: SVYDDTPPAAASWNITSFSESSR*HCRGFL
Trigger: CAGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGA...GAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000678714.1
CDS-3UTR CCA 90 bp TGCTGTTTTGACGTAAGCATTGGTAGTCCCTTACCTGCCGGAAGGGATCTTTTGAGGCTACTGGAGAGCTaGGCTTTGCTGAGGAACACA +
Preference number: 4 (lower is better)
Translates to: CCFDVSIGSPLPAGRDLLRLLES*ALLRNT
Trigger: TGTGTTCCTCAGCAAAGCCCAGCTCTCCAGTAGCCT...CAAAAGATCCCTTCCGGCAGGTAAGGGACTACCAATGCTTACGTCAAAACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATATACAAAGGGCAGGGCGTCGTaGCCGTTAAACTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: DPATLASCITLNQSLRYTKGRAS*PLNFCM
Trigger: CATGCAGAAGTTTAACGGCCACGACGCCCTGCCCTT...TGTATATCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACATCCCTTTCATTTCCTaGGACTCAAAACGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDIPFIS*DSKRSL
Trigger: CAAACTGCGTTTTGAGTCCCAGGAAATGAAAGGGAT...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGATCCCTTTCATTTCCTaGGACTCAAAACGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWIPFIS*DSKRSL
Trigger: CAAACTGCGTTTTGAGTCCCAGGAAATGAAAGGGAT...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGGTCTCTTCCAGTGTTTaGACAAGACTCTTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGVSSSV*TRLFLS
Trigger: GCTAAGAAAGAGTCTTGTCCAAACACTGGAAGAGAC...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGGTCTCTTCCAGTGTTTaGACAAGACTCTTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWVSSSV*TRLFLS
Trigger: GCTAAGAAAGAGTCTTGTCCAAACACTGGAAGAGAC...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CTTCTTCCCAGCCCTGCAGTCATTGCAGAACCAGCTGCCGTCAGGCATCTCGATTTGTATTTCAACAGGTaGTCTTTGTCTCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: LLPSPAVIAEPAAVRHLDLYFNR*SLSLPV
Trigger: CACTGGAAGAGACAAAGACCACCTGTTGAAATACAA...ATCGAGATGCCTGACGGCAGCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAATAGCTGTGAAGGAGTaGATCTGCAGAAACCATGCA +
Preference number: 4 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRIAVKE*ICRNHA
Trigger: TGCATGGTTTCTGCAGATCCACTCCTTCACAGCTAT...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TTCATCTATGTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCTATCCAAGCTCTTTCTaGGGCGTCACCAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: FIYVFSRSGQLPRPGRLSYPSSF*GVTKEL
Trigger: CAGTTCTTTGGTGACGCCCCAGAAAGAGCTTGGATA...GCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGACATAGATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp CTGAGCATTACTCACACTGCAGCGTGGGCAGCTAAATGGCCTTCATACCAATGCTCCGCCTTCTCTTCATaGGAATGCACTCTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: LSITHTAAWAAKWPSYQCSAFSS*ECTLLS
Trigger: TGAGAGAAGAGTGCATTCCCATGAAGAGAAGGCGGA...GCATTGGTATGAAGGCCATTTAGCTGCCCACGCTGCAGTGTGAGTAATGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp TTCATCTATGTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCTCCGCCTTCTCTTCATaGGAATGCACTCTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: FIYVFSRSGQLPRPGRLSSAFSS*ECTLLS
Trigger: TGAGAGAAGAGTGCATTCCCATGAAGAGAAGGCGGA...GCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGACATAGATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp ATCCTGCAACATTTGAGCAGAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATTCCGCCTTCTCTTCATaGGAATGCACTCTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: ILQHLSRANRGTQPALSHSAFSS*ECTLLS
Trigger: TGAGAGAAGAGTGCATTCCCATGAAGAGAAGGCGGA...ATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTCTGCTCAAATGTTGCAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GTAGTTCCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTCCCAGCCAGAGCTACACAGTTTaGCCCTCCGCCTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: VVPKFHPNDILEVQLLPSQSYTV*PSAFSS
Trigger: TGAAGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTG...GCTGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGGAACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp GGCCCCCAGTTATCATCTCCTCATAAACATGACAAAAACAGGACCCATGTCTACGTGGCATGGAGACTGTaGTCTTCTTCCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GPQLSSPHKHDKNRTHVYVAWRL*SSSSQE
Trigger: CTCCTGGGAGGAAGAAGACCACAGTCTCCATGCCAC...GTAGACATGGGTCCTGTTTTTGTCATGTTTATGAGGAGATGATAACTGGGGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp TTCAGTGGTTTACATGCATCAGACAGATTTTTCGTTGCTGCCTGGCTCTTGAGCGTGGCATGGAGACTGTaGTCTTCTTCCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: FSGLHASDRFFVAAWLLSVAWRL*SSSSQE
Trigger: CTCCTGGGAGGAAGAAGACCACAGTCTCCATGCCAC...GCTCAAGAGCCAGGCAGCAACGAAAAATCTGTCTGATGCATGTAAACCACTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR CCA 90 bp TGGCACACATACTCCTTTTTGGCAGTCACTCCTCGCTCAGACTTTTTGGATGAGTCCTGCTTCGTGGCATaGAGACTGTGGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: WHTYSFLAVTPRSDFLDESCFVA*RLWSSS
Trigger: GGAAGAAGACCACAGTCTCCATGCCACGAAGCAGGA...CTCATCCAAAAAGTCTGAGCGAGGAGTGACTGCCAAAAAGGAGTATGTGTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp TACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCCAGAAGACCAAAAACTaGGATGCTGCATCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: YFSLCFVCTFVWGLRGLVQKTKN*DAASPF
Trigger: GAAGGGAGATGCAGCATCCCAGTTTTTGGTCTTCTG...GACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR CCA 90 bp CAGGGCCGCATCAGTAAACACACACTTCAGTCGGTGGTGATTTGTGAAATAGGTCCACCAGGGCAAACTTaGTGTTGTAGCGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: QGRISKHTLQSVVICEIGPPGQT*CCSVLS
Trigger: AGAGAGCACGCTACAACACCAAGTTTGCCCTGGTGG...ACCTATTTCACAAATCACCACCGACTGAAGTGTGTGTTTACTGATGCGGCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACAAGGAGGCTGCCTCCATaGCCTTGTAAGAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTRRLPP*PCKSLF
Trigger: GAACAAGCTCTTACAAGGCCATGGAGGCAGCCTCCT...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAATTTCGCTTCTTCAGTaGTTTACATGCATCAGACAG +
Preference number: 4 (lower is better)
Translates to: LRARKGATRRRVSSDPWEISLLQ*FTCIRQ
Trigger: CTGTCTGATGCATGTAAACCACTGAAGAAGCGAAAT...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGCTGAAGATGCTGCCGTaGAAGCCCGATTTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: RQILQFVFRLHFRMGTPRLKMLP*KPDFAS
Trigger: AGAAGCGAAATCGGGCTTCCACGGCAGCATCTTCAG...CCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTATCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR CCA 90 bp CGACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATATACCTGAAGATGCTGCCGTaGAAGCCCGATTTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: RPRYTGLMHYSKSKPSIYLKMLP*KPDFAS
Trigger: AGAAGCGAAATCGGGCTTCCACGGCAGCATCTTCAG...GTATATCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGCAAATCCAACTTGACTaGTGTGGGCTCCCACAAAAG +
Preference number: 4 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSEQIQLD*CGLPQK
Trigger: CTTTTGTGGGAGCCCACACCAGTCAAGTTGGATTTG...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp TCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCCTCGCTCAGACTTTTTaGATGAGACAGATACTTCAG +
Preference number: 4 (lower is better)
Translates to: SVCVSSALSYGDSEGSSPLAQTF*MRQILQ
Trigger: CTGAAGTATCTGTCTCATCCAAAAAGTCTGAGCGAG...GGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR CCA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGCTCGCTCAGACTTTTTaGATGAGACAGATACTTCAG +
Preference number: 4 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWLAQTF*MRQILQ
Trigger: CTGAAGTATCTGTCTCATCCAAAAAGTCTGAGCGAG...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAACCCAAATGATATCCTaGAAGTGCAGCTTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRTQMIS*KCSFFP
Trigger: TGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGT...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGGAACATTTTTGGGATaGCAAACTTCTGCCGGCCAC +
Preference number: 4 (lower is better)
Translates to: RYFSLCFVCTFVWGLRGLGTFLG*QTSAGH
Trigger: GTGGCCGGCAGAAGTTTGCCATCCCAAAAATGTTCC...GAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp GACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACACATTTCAGAGGAGAGGAACATTTTTGGGATaGCAAACTTCTGCCGGCCAC +
Preference number: 4 (lower is better)
Translates to: DEFLATLGKSLRYTFQRRGTFLG*QTSAGH
Trigger: GTGGCCGGCAGAAGTTTGCCATCCCAAAAATGTTCC...TCTCCTCTGAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACAGCTTCTCACTAGGATaGAAAAGAAGCGTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDSFSLG*KRSVSE
Trigger: CTCAGAAACGCTTCTTTTCCATCCTAGTGAGAAGCT...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TCCTCGTCGATCAGCTCCCCAACGTACTCGTTAACAAATTCTCCCTTTCTGATGAGTGGGTGTCATACCTaGCCTAGACCAGTGCCCATA +
Preference number: 4 (lower is better)
Translates to: SSSISSPTYSLTNSPFLMSGCHT*PRPVPI
Trigger: TATGGGCACTGGTCTAGGCCAGGTATGACACCCACT...CATCAGAAAGGGAGAATTTGTTAACGAGTACGTTGGGGAGCTGATCGACGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCAACTCTAAGGTGTGTGTaGGGACACTGCCCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSTLRCV*GHCPAC
Trigger: ACAGGCCGGGCAGTGTCCCCACACACACCTTAGAGT...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AAACAGTCATCAACTACACTCATAGGATCAAGATATTTGGCAACTGACAGTCATACCCACGGTCACAGCTaGGGGCGTGGTCAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: KQSSTTLIGSRYLATDSHTHGHS*GRGQPQ
Trigger: CTGGGGCTGACCACGCCCCCAGCTGTGACCGTGGGT...ATGACTGTCAGTTGCCAAATATCTTGATCCTATGAGTGTAGTTGATGACTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACCTATTTTCCCCCAACTaGCAAGTCTCAACTCTCTAT +
Preference number: 4 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDLFSPN*QVSTLY
Trigger: ATAGAGAGTTGAGACTTGCCAGTTGGGGGAAAATAG...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCATCTATCAGTTATGGGCTACTTGGTCCGGGGCCTTaGATCAAAAGGGTTAAATGG +
Preference number: 4 (lower is better)
Translates to: EGAPMRWLTSNASISYGLLGPGP*IKRVKW
Trigger: CCATTTAACCCTTTTGATCCAAGGCCCCGGACCAAG...TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AAACCAGGAGATGGTCCTCTCGGAAAACTCCGCTCCTCTAGGATGAGCCCACTCTCTTTGGACACCATTTaGTCATTTGCAGGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: KPGDGPLGKLRSSRMSPLSLDTI*SFAGFC
Trigger: GCAAAACCCTGCAAATGACCAAATGGTGTCCAAAGA...GAGTGGGCTCATCCTAGAGGAGCGGAGTTTTCCGAGAGGACCATCTCCTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AAACCAGGAGATGGTCCTCTCGGAAAACTCCGCTCCTCTAGGATGAGCCCACTCTGTCATGCTGCTCTTTaGACACCATTTGGTCATTTG +
Preference number: 4 (lower is better)
Translates to: KPGDGPLGKLRSSRMSPLCHAAL*TPFGHL
Trigger: CAAATGACCAAATGGTGTCCAAAGAGCAGCATGACA...GAGTGGGCTCATCCTAGAGGAGCGGAGTTTTCCGAGAGGACCATCTCCTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCATCTATCAGTTATGGGCTATCCTGGCATCTGAAGTaGGACAATGCTGCCACACAT +
Preference number: 4 (lower is better)
Translates to: EGAPMRWLTSNASISYGLSWHLK*DNAATH
Trigger: ATGTGTGGCAGCATTGTCCCACTTCAGATGCCAGGA...TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TTTTGCTTTCTCCATAATATAGAGGGAGCACCTATGCGCTGGCTGACTTCTAATTGGACACACACACCATaGGCAAGCAAGGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: FCFLHNIEGAPMRWLTSNWTHTP*ASKARA
Trigger: GGCCCTGGCCTTGCTTGCCCATGGTGTGTGTGTCCA...ATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTCTATATTATGGAGAAAGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TGTGTCCTCAGCTTCAGCATCTTCTGTAGGGTCCTGTATCCTCTTTGTGTGGTTCTCACATCAGGCTTCTaGCAAGAGCCTTCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: CVLSFSIFCRVLYPLCVVLTSGF*QEPSQE
Trigger: CTCCTGAGAAGGCTCTTGCCAGAAGCCTGATGTGAG...AACCACACAAAGAGGATACAGGACCCTACAGAAGATGCTGAAGCTGAGGACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR CCA 90 bp GACCTCTATTGCCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGAAGCGAGGGGAATCCGTaGCTTTACAGCCCTCCATGC +
Preference number: 4 (lower is better)
Translates to: DLYCQYVHYLKMPPYYNGSEGNP*LYSPPC
Trigger: GCATGGAGGGCTGTAAAGCCACGGATTCCCCTCGCT...TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp CACAGGAGCAGCAAGCTTGCTCCTGACAGCATGGCTCTCACACAGCATCCTCCCAAAATACTATATGCCTaGATGGTCAGCATGCTTCAA +
Preference number: 4 (lower is better)
Translates to: HRSSKLAPDSMALTQHPPKILYA*MVSMLQ
Trigger: TTGAAGCATGCTGACCATCCAGGCATATAGTATTTT...GGGAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AATTTTTGCATGAACACTGAGGAAAGGCCCAAAGATCCATCTAGAGCAGGTGGGATAGCCCCAAGCAGGTaGCAGCAAGGACCAAGTGTC +
Preference number: 4 (lower is better)
Translates to: NFCMNTEERPKDPSRAGGIAPSR*QQGPSV
Trigger: GACACTTGGTCCTTGCTGCCACCTGCTTGGGGCTAT...CCCACCTGCTCTAGATGGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TGTGTCCTCAGCTTCAGCATCTTCTGTAGGGTCCTGTATCCTCTTTGTGTGGTTCGGAGAAGCCATTTGTaGAGGTGGCACATTCACCTG +
Preference number: 4 (lower is better)
Translates to: CVLSFSIFCRVLYPLCVVRRSHL*RWHIHL
Trigger: CAGGTGAATGTGCCACCTCCACAAATGGCTTCTCCG...AACCACACAAAGAGGATACAGGACCCTACAGAAGATGCTGAAGCTGAGGACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR CCA 90 bp CTCCTCATAAACATGACAAAAACAGGACCCATGTCTACAATGAGAAAAACAGCAAGCTCCCCTGACTCATaGGCAGGCCTCGACCCCGCT +
Preference number: 4 (lower is better)
Translates to: LLINMTKTGPMSTMRKTASSPDS*AGLDPA
Trigger: AGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCT...TGCTGTTTTTCTCATTGTAGACATGGGTCCTGTTTTTGTCATGTTTATGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR CAA 72 bp TTGTCAGTGATTGTGTCTCTCTTCCGAAGACTGTGCTaGTCCGTCCTGAGTCTTTTCCTGGGTGTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LSVIVSLFRRLC*SVLSLFLGVSS
Trigger: TGAGGACACACCCAGGAAAAGACTCAGGACGGACAAGCACAGTCTTCGGAAGAGAGACACAATCACTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR TCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTACACTTTACAACACTCTaGACAGAAAGGGGACTCTGC +
Preference number: 4 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLHFTTL*TERGLC
Trigger: GCAGAGTCCCCTTTCTGTTCAGAGTGTTGTAAAGTG...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CTGAGCATTACTCACACTGCAGCGTGGGCAGCTAAATGGCCTTCATACCAATGCTTGTCCATTTTCTTCTaGCTGAGACACATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LSITHTAAWAAKWPSYQCLSIFF*LRHISS
Trigger: GCTGCTGATGTGTCTCAGTCAGAAGAAAATGGACAA...GCATTGGTATGAAGGCCATTTAGCTGCCCACGCTGCAGTGTGAGTAATGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTACCAAAGAACTGTACGTaGTACTGGCGTGCACTCTTT +
Preference number: 4 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLPKNCT*YWRALF
Trigger: AAAGAGTGCACGCCAGTATCACGTACAGTTCTTTGG...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACACCACATAGAGAAAGGTaGACTTGGCTTTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTPHRER*TWLSAP
Trigger: AGGAGCGGAAAGCCAAGTTCACCTTTCTCTATGTGG...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTATTCTTCACTGACTCCTaGGGATTCTGCCATTTCTCC +
Preference number: 4 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLFFTDS*GFCHFS
Trigger: GGAGAAATGGCAGAATCCTCAGGAGTCAGTGAAGAA...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp AGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGAAGGTTCCCTATGTCGGGGTaGCTCTCCAGGGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: RNMMHTMGSMHHLQNVGRFPMSG*LSRVSA
Trigger: TGCAGAGACCCTGGAGAGTCACCCCGACATAGGGAA...CCTTCCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR TCA 90 bp GACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATATACATTCAATCTCCTCACCTaGAGCATCTGGGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: DPATLASCITLNQSLRYTFNLLT*SIWVLS
Trigger: GCTGAGCACCCAGATGCTTCAGGTGAGGAGATTGAA...TGTATATCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR TCA 90 bp CCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATATACATGGACTCCACTGTGACCTaGGCAGCTCTTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: PRYTGLMHYSKSKPSIYMDSTVT*AALQSP
Trigger: AGGAGATTGAAGAGCTGCTCAGGTCACAGTGGAGTC...CATGTATATCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR TCA 90 bp AGTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCGACTCCACTGTGACCTaGGCAGCTCTTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: SVYDDTPPAAASWNITSFDSTVT*AALQSP
Trigger: AGGAGATTGAAGAGCTGCTCAGGTCACAGTGGAGTC...GAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000678714.1
CDS-3UTR TCA 90 bp CCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATATACATGCAGCAGACTCCACTGTaGCCTGAGCAGCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: PRYTGLMHYSKSKPSIYMQQTPL*PEQLFN
Trigger: ATTGAAGAGCTGCTCAGGTCACAGTGGAGTCTGCTG...CATGTATATCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR TCA 90 bp AATTTTTGCATGAACACTGAGGAAAGGCCCAAAGATCCATCTAGAGCAGGTGGGGGTTCAAATCCAACTTaGCTGGTGTGGGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: NFCMNTEERPKDPSRAGGGSNPT*LVWAPT
Trigger: TGTGGGAGCCCACACCAGTCAAGTTGGATTTGAACC...CCCACCTGCTCTAGATGGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp CATTGCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTCTCAGACTTTTTGGATaGGACAGATACTTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: HCCHHLQGQLLTRMEKKRLRLFG*DRYFSL
Trigger: CAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGAG...ACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GTAGTTCCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTCCCAGCCTTGCAGTGCGTTTTTaGAGACTCTTCCGATCCCTC +
Preference number: 4 (lower is better)
Translates to: VVPKFHPNDILEVQLLPSLAVRF*RLFRSL
Trigger: GAGGGATCGGAAGAGTCTTCAAAAACGCACTGCAAG...GCTGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGGAACTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATGAAGCACTCGTCCTCTaGCTGCCTCTTCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNEALVL*LPLPFP
Trigger: GGGGAAGGGAAGAGGCAGTCAGAGGACGAGTGCTTC...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GGCTTCCCTCTGAAGCTTAATTTCACGAAAACGAGCTTCAGCTTCTTGCAGTGCGCAGAGGTGGCAAAATaGAGTCGAAGGTTTGCCACA +
Preference number: 4 (lower is better)
Translates to: GFPLKLNFTKTSFSFLQCAEVAK*SRRFAT
Trigger: TGTGGCAAACCTTCGACTTCATTTTGCCACCTCTGC...GCACTGCAAGAAGCTGAAGCTCGTTTTCGTGAAATTAAGCTTCAGAGGGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAAGTGGGAGGGAACCTTaGCATTCGGAGAAATTCAAG +
Preference number: 4 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLSGREP*HSEKFK
Trigger: CTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACT...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATGAAGATAGGCCCAGGTaGGAAGTAGGCCCAACCCGG +
Preference number: 4 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNEDRPR*EVGPTR
Trigger: CCGGGTTGGGCCTACTTCTCACCTGGGCCTATCTTC...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCAGGCAGAGGGCACATGTaGTCAGCAGAGACTGCATCT +
Preference number: 4 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSGRGHM*SAETAS
Trigger: AGATGCAGTCTCTGCTGATCACATGTGCCCTCTGCC...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TCCACTGAGTTATCAACGGGTATTGTAGAGACATTCAAAGTTAGTGTTACTTGCAGGGCCACACACCCCTaGACCCCACGCTTACAGGTC +
Preference number: 4 (lower is better)
Translates to: STELSTGIVETFKVSVTCRATHP*TPRLQV
Trigger: GACCTGTAAGCGTGGGGTTCAGGGGTGTGTGGCCCT...GCAAGTAACACTAACTTTGAATGTCTCTACAATACCCGTTGATAACTCAGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCAAGGAGCATAAATCTATaGGCCGATCCAGTATTTTCT +
Preference number: 4 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPRSINL*ADPVFS
Trigger: AGAAAATACTGGATCGGCTCATAGATTTATGCTCCT...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACACATTTCAGAGGAGAAAAGCCTGGCTCCACTaGGTTATCAACGGGTATTGT +
Preference number: 4 (lower is better)
Translates to: DEFLATLGKSLRYTFQRRKAWLH*VINGYC
Trigger: ACAATACCCGTTGATAACTCAGTGGAGCCAGGCTTT...TCTCCTCTGAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTATTTGTATTTAATTTCTaGCGGGGCATTTCACACCTC +
Preference number: 4 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLFVFNF*RGISHL
Trigger: GAGGTGTGAAATGCCCCGTCAGAAATTAAATACAAA...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp AAACCAGGAGATGGTCCTCTCGGAAAACTCCGCTCCTCTAGGATGAGCCCACTCTGGGTGACTGCTTATTaGACCAGAGCCATTTTTATA +
Preference number: 4 (lower is better)
Translates to: KPGDGPLGKLRSSRMSPLWVTAY*TRAIFI
Trigger: TATAAAAATGGCTCTGGTTCAATAAGCAGTCACCCA...GAGTGGGCTCATCCTAGAGGAGCGGAGTTTTCCGAGAGGACCATCTCCTGGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp ATCCTGCAACATTTGAGCAGAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATTACTCAAGACAGCACTaGGATGTAACTACACCTGGA +
Preference number: 4 (lower is better)
Translates to: ILQHLSRANRGTQPALSHYSRQH*DVTTPG
Trigger: TCCAGGTGTAGTTACATCTCAGTGCTGTCTTGAGTA...ATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTCTGCTCAAATGTTGCAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp AATTTTTGCATGAACACTGAGGAAAGGCCCAAAGATCCATCTAGAGCAGGTGGGATCCAACCAAAAAGATaGGGCCTGTCGGGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: NFCMNTEERPKDPSRAGGIQPKR*GLSGCW
Trigger: CCAACAGCCCGACAGGCCTCATCTTTTTGGTTGGAT...CCCACCTGCTCTAGATGGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TCTGCCTTTCACGACATGAAAGGTTGTGTCATGAAACCTCGCTTAAGTTTCCTAACGCACCAGGTGACGTaGCTCACTCGGAGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: SAFHDMKGCVMKPRLSFLTHQVT*LTRRSH
Trigger: ATGGCTTCTCCGAGTGAGTCACGTCACCTGGTGCGT...TAGGAAACTTAAGCGAGGTTTCATGACACAACCTTTCATGTCGTGAAAGGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GACCTCTATTGCCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGAATGAGGCTCATTTCCTaGTCAGGGTCTGGGACCCAC +
Preference number: 4 (lower is better)
Translates to: DLYCQYVHYLKMPPYYNGMRLIS*SGSGTH
Trigger: GTGGGTCCCAGACCCTGATCAGGAAATGAGCCTCAT...TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp AGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGAAGGGGTCTCGACCACCACTaGGTTGGTTTGAGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: RNMMHTMGSMHHLQNVGRGLDHH*VGLSPC
Trigger: GCAGGGACTCAAACCAACTCAGTGGTGGTCGAGACC...CCTTCCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp AGGTTGCCTAGGTCCCTGACCTTCCTGCACTGGAAGGCCTACACTCCTCTAATGAGCCTTCGATATACATaGCTTAGGATCAGGAATAAC +
Preference number: 4 (lower is better)
Translates to: RLPRSLTFLHWKAYTPLMSLRYT*LRIRNN
Trigger: GTTATTCCTGATCCTAAGTCATGTATATCGAAGGCT...CATTAGAGGAGTGTAGGCCTTCCAGTGCAGGAAGGTCAGGGACCTAGGCAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGTCCTGTAAGGTCAAGTaGTATATTCGGTCAAGTGTT +
Preference number: 4 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGSCKVK*YIRSSV
Trigger: AACACTTGACCGAATATATCACTTGACCTTACAGGA...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677895.1
CDS-3UTR GCA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCACAGAAAGGGGACTCTaGTTGATGCTAAATTCCATC +
Preference number: 4 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLTERGL*LMLNSI
Trigger: GATGGAATTTAGCATCAAGCAGAGTCCCCTTTCTGT...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAATGAGGATTTCTGGTGCCTaGTTCATCTTTATGCACTTT +
Preference number: 4 (lower is better)
Translates to: GQVAAAPNSRPALVKGKMRISGA*FIFMHF
Trigger: AAAGTGCATAAAGATGAAGCAGGCACCAGAAATCCT...CATTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACTGGTGTGGGCTCCCACAGGATTTCTGGTGCCTaGTTCATCTTTATGCACTTT +
Preference number: 4 (lower is better)
Translates to: VQYRAAGFKSNLTGVGSHRISGA*FIFMHF
Trigger: AAAGTGCATAAAGATGAAGCAGGCACCAGAAATCCT...GTGGGAGCCCACACCAGTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000678714.1
CDS-3UTR GCA 90 bp CAGGGCCGCATCAGTAAACACACACTTCAGTCGGTGGTGATTTGTGAAATAGGTCAGTTTGGCATCGTGTaGGCCGGGTTCTCCATTAAA +
Preference number: 4 (lower is better)
Translates to: QGRISKHTLQSVVICEIGQFGIV*AGFSIK
Trigger: TTTAATGGAGAACCCGGCGCACACGATGCCAAACTG...ACCTATTTCACAAATCACCACCGACTGAAGTGTGTGTTTACTGATGCGGCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TCCTCGTCGATCAGCTCCCCAACGTACTCGTTAACAAATTCTCCCTTTCTGATGCAGTTTGGCATCGTGTaGGCCGGGTTCTCCATTAAA +
Preference number: 4 (lower is better)
Translates to: SSSISSPTYSLTNSPFLMQFGIV*AGFSIK
Trigger: TTTAATGGAGAACCCGGCGCACACGATGCCAAACTG...CATCAGAAAGGGAGAATTTGTTAACGAGTACGTTGGGGAGCTGATCGACGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp CAGGGCCGCATCAGTAAACACACACTTCAGTCGGTGGTGATTTGTGAAATAGGTGATCTGCAGAAACCATaGAAGGCCACCAAGGGTAAC +
Preference number: 4 (lower is better)
Translates to: QGRISKHTLQSVVICEIGDLQKP*KATKGN
Trigger: GTTACCCTTGGTGGCCTTGCATGGTTTCTGCAGATC...ACCTATTTCACAAATCACCACCGACTGAAGTGTGTGTTTACTGATGCGGCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CGACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATATACGATCTGCAGAAACCATaGAAGGCCACCAAGGGTAAC +
Preference number: 4 (lower is better)
Translates to: RPRYTGLMHYSKSKPSIYDLQKP*KATKGN
Trigger: GTTACCCTTGGTGGCCTTGCATGGTTTCTGCAGATC...GTATATCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp AGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCCTCCACTGACATaGTTGCAGCTTCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: RQILQFVFRLHFRMGTPRAPPLT*LQLLLL
Trigger: AAGCAGAAGAAGCTGCAAGCATGTCAGTGGAGGAGC...CCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTATCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp CAGGGCCGCATCAGTAAACACACACTTCAGTCGGTGGTGATTTGTGAAATAGGTTTCTCCCAAAGACTCTaGAGCAATGCCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: QGRISKHTLQSVVICEIGFSQRL*SNASLL
Trigger: AAGGAGGCTGGCATTGCTGCAGAGTCTTTGGGAGAA...ACCTATTTCACAAATCACCACCGACTGAAGTGTGTGTTTACTGATGCGGCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AATGATCACAATGGCAGTTTCGAGGAATCCAGGGTCAGTCCTCACACGGGCCTCTTCTCTTCATGGGAATaGACTCTTCTCTCACAGACT +
Preference number: 4 (lower is better)
Translates to: NDHNGSFEESRVSPHTGLFSSWE*TLLSQT
Trigger: AGTCTGTGAGAGAAGAGTGCATTCCCATGAAGAGAA...GAGGCCCGTGTGAGGACTGACCCTGGATTCCTCGAAACTGCCATTGTGATCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AATTTTTGCATGAACACTGAGGAAAGGCCCAAAGATCCATCTAGAGCAGGTGGGACTCTCCAGGGTCTCTaGAGAGCTACACAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: NFCMNTEERPKDPSRAGGTLQGL*RATQFG
Trigger: GCCAAACTGTGTAGCTCTGCAGAGACCCTGGAGAGT...CCCACCTGCTCTAGATGGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AGTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCTCTGGGGTCAGCCTCTaGCGTCTTTTGAGGAGTACT +
Preference number: 4 (lower is better)
Translates to: SVYDDTPPAAASWNITSFSGVSL*RLLRST
Trigger: AGTACTCCTCAAAAGACGGCAGAGGCTGACCCCAGA...GAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000678714.1
CDS-3UTR GCA 90 bp CCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATATACATGTCTGGGGTCAGCCTCTaGCGTCTTTTGAGGAGTACT +
Preference number: 4 (lower is better)
Translates to: PRYTGLMHYSKSKPSIYMSGVSL*RLLRST
Trigger: AGTACTCCTCAAAAGACGGCAGAGGCTGACCCCAGA...CATGTATATCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCACTGCATCTCCCTTCCTaGTTCGTGGCATGGAGACTG +
Preference number: 4 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSLHLPS*FVAWRL
Trigger: CAGTCTCCATGCCACGAAGCAGGAAGGGAGATGCAG...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TGGCACACATACTCCTTTTTGGCAGTCACTCCTCGCTCAGACTTTTTGGATGAGGACCAAAAACTGGGATaGTGCATCTCCCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: WHTYSFLAVTPRSDFLDEDQKLG*CISLPA
Trigger: AGCAGGAAGGGAGATGCAGCATCCCAGTTTTTGGTC...CTCATCCAAAAAGTCTGAGCGAGGAGTGACTGCCAAAAAGGAGTATGTGTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp GTAGTTCCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTCCCAGCCTCTTCCGAAGACTGTaGTTGTCCGTCCTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: VVPKFHPNDILEVQLLPSLFRRL*LSVLSL
Trigger: AAGACTCAGGACGGACAAGCACAGTCTTCGGAAGAG...GCTGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGGAACTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp GACCTCTATTGCCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGACTTGAGCGAGGAGGCTaGCTCCATGGCCTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: DLYCQYVHYLKMPPYYNGLERGG*LHGLVR
Trigger: TCTTACAAGGCCATGGAGGCAGCCTCCTCGCTCAAG...TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AATGATCACAATGGCAGTTTCGAGGAATCCAGGGTCAGTCCTCACACGGGCCTCTTACATCATTCTAAGTaGAGTACAGAGCAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: NDHNGSFEESRVSPHTGLLHHSK*STEQLG
Trigger: ACCCAGCTGCTCTGTACTGCACTTAGAATGATGTAA...GAGGCCCGTGTGAGGACTGACCCTGGATTCCTCGAAACTGCCATTGTGATCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp AGAGTGGGAGGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGTTTGTGTTTCGTCTaGACTTTCGTATGGGGACTC +
Preference number: 4 (lower is better)
Translates to: RVGGNLDIRRNSSVAVTLSLCFV*TFVWGL
Trigger: GAGTCCCCATACGAAAGTGCAGACGAAACACAAACT...CAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCAGCTTCTTCCCAGCCCTaGAGTCATTGCAGAACCAGC +
Preference number: 4 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSASSQP*SHCRTS
Trigger: GCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAGC...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TGCTGTTTTGACGTAAGCATTGGTAGTCCCTTACCTGCCGGAAGGGATCTTTTGATGATATCCTGGAAGTaGAGCTTCTTCCCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: CCFDVSIGSPLPAGRDLLMISWK*SFFPAL
Trigger: CAGGGCTGGGAAGAAGCTGCACTTCCAGGATATCAT...CAAAAGATCCCTTCCGGCAGGTAAGGGACTACCAATGCTTACGTCAAAACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCATGTATGGTGGGGGCTTaGGCTCGCTCTCCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSCMVGA*ARSPVF
Trigger: AAACACAGGAGAGCGAGCGCAAGCCCCCACCATACA...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CAGGGCCGCATCAGTAAACACACACTTCAGTCGGTGGTGATTTGTGAAATAGGTGATGTCGTTCTCGTGTaGGTGCTTGATTCTCGCCAT +
Preference number: 4 (lower is better)
Translates to: QGRISKHTLQSVVICEIGDVVLV*VLDSRH
Trigger: ATGGCGAGAATCAAGCACGCACACGAGAACGACATC...ACCTATTTCACAAATCACCACCGACTGAAGTGTGTGTTTACTGATGCGGCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CCATCTGTAGTTCCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTGGTGGTAGGCCTTGGTaGAGAACTTGCGGTCACACA +
Preference number: 4 (lower is better)
Translates to: PSVVPKFHPNDILEVQLLGGRPW*RTCGHT
Trigger: TGTGTGACCGCAAGTTCTGCACCAAGGCCTACCACC...AAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGGAACTACAGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp AAACAGTCATCAACTACACTCATAGGATCAAGATATTTGGCAACTGACAGTCATTCCCGAAGGGCCGCTTaGCAAGGCCCAGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: KQSSTTLIGSRYLATDSHSRRAA*QGPGRT
Trigger: TGTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGA...ATGACTGTCAGTTGCCAAATATCTTGATCCTATGAGTGTAGTTGATGACTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CGCTCAGACTTTTTGGATGAGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTTGCGGTCTCACGCCCTaGAAAGTCACTCCTTTCGCC +
Preference number: 4 (lower is better)
Translates to: RSDFLDETDTSVCVSSALCGLTP*KVTPFA
Trigger: GGCGAAAGGAGTGACTTTGCAGGGCGTGAGACCGCA...AAGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp TGGCACACATACTCCTTTTTGGCAGTCACTCCTCGCTCAGACTTTTTGGATGAGGTGATCAGCAGAGACTaGATCTTCCATCACCAGACC +
Preference number: 4 (lower is better)
Translates to: WHTYSFLAVTPRSDFLDEVISRD*IFHHQT
Trigger: GGTCTGGTGATGGAAGATGCAGTCTCTGCTGATCAC...CTCATCCAAAAAGTCTGAGCGAGGAGTGACTGCCAAAAAGGAGTATGTGTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp TGCTGTTTTGACGTAAGCATTGGTAGTCCCTTACCTGCCGGAAGGGATCTTTTGGTGATCAGCAGAGACTaGATCTTCCATCACCAGACC +
Preference number: 4 (lower is better)
Translates to: CCFDVSIGSPLPAGRDLLVISRD*IFHHQT
Trigger: GGTCTGGTGATGGAAGATGCAGTCTCTGCTGATCAC...CAAAAGATCCCTTCCGGCAGGTAAGGGACTACCAATGCTTACGTCAAAACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATGCACCTCTCAGTAGGTaGCCTGGCAGAGGGCACATG +
Preference number: 4 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNAPLSR*PGRGHM
Trigger: CATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGC...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TCCACTGAGTTATCAACGGGTATTGTAGAGACATTCAAAGTTAGTGTTACTTGCGCCCCCTTCTCAGGGTaGTCCAGACTTCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: STELSTGIVETFKVSVTCAPFSG*SRLPRV
Trigger: GACCCTGGGAAGTCTGGAGCACCCTGAGAAGGGGGC...GCAAGTAACACTAACTTTGAATGTCTCTACAATACCCGTTGATAACTCAGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATCAAAGGCACACATGGTaGCCCCTTCTCAGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHQRHTW*PLLRVL
Trigger: GAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTG...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CAGGGCCGCATCAGTAAACACACACTTCAGTCGGTGGTGATTTGTGAAATAGGTGATGCTGGTTTCGGATaGCAAGGAATCCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: QGRISKHTLQSVVICEIGDAGFG*QGILRD
Trigger: ATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATC...ACCTATTTCACAAATCACCACCGACTGAAGTGTGTGTTTACTGATGCGGCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp GGCTTCCCTCTGAAGCTTAATTTCACGAAAACGAGCTTCAGCTTCTTGCAGTGCGGGTATGGGTTTAGGTaGAGATGCTGGTTTCGGATG +
Preference number: 4 (lower is better)
Translates to: GFPLKLNFTKTSFSFLQCGYGFR*RCWFRM
Trigger: CATCCGAAACCAGCATCTGCACCTAAACCCATACCC...GCACTGCAAGAAGCTGAAGCTCGTTTTCGTGAAATTAAGCTTCAGAGGGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp ACAAATGTGGACCTAACACGTAACCATGGAGTTCAAAGGTATCCAACCAAAAAGTTCCGTGCAAAGCCCTaGTGCAGCTCTGGACAGCCC +
Preference number: 4 (lower is better)
Translates to: TNVDLTRNHGVQRYPTKKFRAKP*CSSGQP
Trigger: GGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAA...CTTTTTGGTTGGATACCTTTGAACTCCATGGTTACGTGTTAGGTCCACATTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GGTGACTCTCCAGGGTCTCTGCAGAGCTACACAGTTTGGCCCTCCGCCTTCTCTGAGGACCACTTTTCATaGCAAAGCAAAATTTATACT +
Preference number: 4 (lower is better)
Translates to: GDSPGSLQSYTVWPSAFSEDHFS*QSKIYT
Trigger: AGTATAAATTTTGCTTTGGCATGAAAAGTGGTCCTC...AGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTGCAGAGACCCTGGAGAGTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR GCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCCACCATTTGGTCATTTaGAGGGTTTTGCTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSHHLVI*RVLLSP
Trigger: TGGAGAAAGCAAAACCCTGCAAATGACCAAATGGTG...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ATCCTGCAACATTTGAGCAGAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATCTGATGCCAATGTCATaGTGCTCTTTGGACACCATT +
Preference number: 4 (lower is better)
Translates to: ILQHLSRANRGTQPALSHLMPMS*CSLDTI
Trigger: AATGGTGTCCAAAGAGCAGCATGACATTGGCATCAG...ATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTCTGCTCAAATGTTGCAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GACCTCTATTGCCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGAGAAGTGGGACAATGCTaGCACACATGGGACTGTCCC +
Preference number: 4 (lower is better)
Translates to: DLYCQYVHYLKMPPYYNGEVGQC*HTWDCP
Trigger: GGGACAGTCCCATGTGTGGCAGCATTGTCCCACTTC...TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TCTGCCTTTCACGACATGAAAGGTTGTGTCATGAAACCTCGCTTAAGTTTCCTACCCTGCCATCACAGGTaGCACACACTCACATCAGGC +
Preference number: 4 (lower is better)
Translates to: SAFHDMKGCVMKPRLSFLPCHHR*HTLTSG
Trigger: GCCTGATGTGAGTGTGTGGCACCTGTGATGGCAGGG...TAGGAAACTTAAGCGAGGTTTCATGACACAACCTTTCATGTCGTGAAAGGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TTTTGCTTTCTCCATAATATAGAGGGAGCACCTATGCGCTGGCTGACTTCTAATCTTTACAGCCCTCCATaGACGTCTCAGGCCCAGACG +
Preference number: 4 (lower is better)
Translates to: FCFLHNIEGAPMRWLTSNLYSPP*TSQAQT
Trigger: CGTCTGGGCCTGAGACGTGCATGGAGGGCTGTAAAG...ATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTCTATATTATGGAGAAAGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGCTTGAAAATACTATATaGCTGGATGGTCAGCATGCT +
Preference number: 4 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKLENTI*LDGQHA
Trigger: AGCATGCTGACCATCCAGGCATATAGTATTTTCAAG...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TGTGCACTACCTGAAGATGCCACCCTATTACAATGGAGTACTTACGTTTTTAGAAGGCCAGGTGGCTGCTaGTCCCAATTCAAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: CALPEDATLLQWSTYVFRRPGGC*SQFKAC
Trigger: GCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCCT...TCTAAAAACGTAAGTACTCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTAGGCCAGGTGGCTGCTaGTCCCAATTCAAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTRPGGC*SQFKAC
Trigger: GCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCCT...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TATTACATCATTCTAAGTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACGTGAGGCCAGGTGGCTaGTGCTCCCAATTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: YYIILSAVQSSWVQIQLDVRPGG*CSQFKA
Trigger: GGCCTTGAATTGGGAGCAGCAGCCACCTGGCCTCAC...GTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCACTTAGAATGATGTAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR GCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGACCACCACAGCCATGCTaGGGCACTGAGCTCCGAGCA +
Preference number: 4 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGPPQPC*GTELRA
Trigger: TGCTCGGAGCTCAGTGCCGCAGCATGGCTGTGGTGG...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AGGTCTCGACCACCACTGAGTTGGTTTGAGTCCCTGCAGAAAATCCCACTCGGAGCTACACTGGCCTCATaGATTACTCTAAATCAAAGC +
Preference number: 4 (lower is better)
Translates to: RSRPPLSWFESLQKIPLGATLAS*ITLNQS
Trigger: GCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGC...TCCGAGTGGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCGAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp CCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTCCCAGCCCTGCAACTGCCGAGGATTTCTaGTGCCTGCTTCATCTTTAT +
Preference number: 4 (lower is better)
Translates to: PKFHPNDILEVQLLPSPATAEDF*CLLHLY
Trigger: ATAAAGATGAAGCAGGCACCAGAAATCCTCGGCAGT...TGCAGGGCTGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp TTCATCTATGTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCACTGCCGAGGATTTCTaGTGCCTGCTTCATCTTTAT +
Preference number: 4 (lower is better)
Translates to: FIYVFSRSGQLPRPGRLSTAEDF*CLLHLY
Trigger: ATAAAGATGAAGCAGGCACCAGAAATCCTCGGCAGT...GCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGACATAGATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp GACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATATACAAGGCTACTGGAGAGCTaGGCTTTGCTGAGGAACACA +
Preference number: 4 (lower is better)
Translates to: DPATLASCITLNQSLRYTRLLES*ALLRNT
Trigger: TGTGTTCCTCAGCAAAGCCCAGCTCTCCAGTAGCCT...TGTATATCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAATCCCTTTCATTTCCTaGGACTCAAAACGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRIPFIS*DSKRSL
Trigger: CAAACTGCGTTTTGAGTCCCAGGAAATGAAAGGGAT...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TCTCGACCACCACTGAGTTGGTTTGAGTCCCTGCAGAAAATCCCACTCGGAGGAGTCTCTTCCAGTGTTTaGACAAGACTCTTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: SRPPLSWFESLQKIPLGGVSSSV*TRLFLS
Trigger: GCTAAGAAAGAGTCTTGTCCAAACACTGGAAGAGAC...TCCTCCGAGTGGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAGTCTCTTCCAGTGTTTaGACAAGACTCTTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRVSSSV*TRLFLS
Trigger: GCTAAGAAAGAGTCTTGTCCAAACACTGGAAGAGAC...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAATGTTGTATTTCAACAGGTaGTCTTTGTCTCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: GQVAAAPNSRPALVKGKMLYFNR*SLSLPV
Trigger: CACTGGAAGAGACAAAGACCACCTGTTGAAATACAA...CATTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AAACCAGGAGATGGTCCTCTCGGAAAACTCCGCTCCTCTAGGATGAGCCCACTCTTGTATTTCAACAGGTaGTCTTTGTCTCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: KPGDGPLGKLRSSRMSPLLYFNR*SLSLPV
Trigger: CACTGGAAGAGACAAAGACCACCTGTTGAAATACAA...GAGTGGGCTCATCCTAGAGGAGCGGAGTTTTCCGAGAGGACCATCTCCTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACACATTTCAGAGGAGATCCGCCTTCTCTTCATaGGAATGCACTCTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: DEFLATLGKSLRYTFQRRSAFSS*ECTLLS
Trigger: TGAGAGAAGAGTGCATTCCCATGAAGAGAAGGCGGA...TCTCCTCTGAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCTTCCCTTCCTGCTTCGTaGCATGGAGACTGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: VCTMIRHLQQHPGILHHSSLPAS*HGDCGL
Trigger: AAGACCACAGTCTCCATGCCACGAAGCAGGAAGGGA...AGAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000678714.1
CDS-3UTR CCA 90 bp GAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCATCTATCAGTTATGGGCTACAGAAGACCAAAAACTaGGATGCTGCATCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: EGAPMRWLTSNASISYGLQKTKN*DAASPF
Trigger: GAAGGGAGATGCAGCATCCCAGTTTTTGGTCTTCTG...TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AAACCAGGAGATGGTCCTCTCGGAAAACTCCGCTCCTCTAGGATGAGCCCACTCATTTCGCTTCTTCAGTaGTTTACATGCATCAGACAG +
Preference number: 4 (lower is better)
Translates to: KPGDGPLGKLRSSRMSPLISLLQ*FTCIRQ
Trigger: CTGTCTGATGCATGTAAACCACTGAAGAAGCGAAAT...GAGTGGGCTCATCCTAGAGGAGCGGAGTTTTCCGAGAGGACCATCTCCTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp ACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTACCCAAATGATATCCTaGAAGTGCAGCTTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: TSVCVSSALSYGDSEGSSTQMIS*KCSFFP
Trigger: TGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGT...AGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCACTTGATGTGCTTGTATaGTGGGGGCTTGCGCTCGCT +
Preference number: 4 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSLDVLV*WGLALA
Trigger: AGCGAGCGCAAGCCCCCACCATACAAGCACATCAAG...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CGCTCAGACTTTTTGGATGAGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTCGCTTGGTGAAGCACTaGTTCTGGCAGAACTCGCCC +
Preference number: 4 (lower is better)
Translates to: RSDFLDETDTSVCVSSALRLVKH*FWQNSP
Trigger: GGGCGAGTTCTGCCAGAACCAGTGCTTCACCAAGCG...AAGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp AGAGTGGGAGGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGGAGAGTAGTTTCCTTTaGGGCCAGCGTCTATTATAC +
Preference number: 4 (lower is better)
Translates to: RVGGNLDIRRNSSVAVTLESSFL*GQRLLY
Trigger: GTATAATAGACGCTGGCCCCAAAGGAAACTACTCTC...CAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCAGGAATCCACTGCAATTaGAGGCTCCACACCGGCAGA +
Preference number: 4 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSGIHCN*RLHTGR
Trigger: TCTGCCGGTGTGGAGCCTCCAATTGCAGTGGATTCC...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCAACAGGTGGTAGGCCTTaGTGCAGAACTTGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSTGGRP*CRTCGH
Trigger: GTGACCGCAAGTTCTGCACCAAGGCCTACCACCTGT...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp GACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACACATTTCAGAGGAGAGAATTGGGGCAGAGGTaGCAAAATGAAGTCGAAGGT +
Preference number: 4 (lower is better)
Translates to: DEFLATLGKSLRYTFQRRELGQR*QNEVEG
Trigger: ACCTTCGACTTCATTTTGCCACCTCTGCCCCAATTC...TCTCCTCTGAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CGCTCAGACTTTTTGGATGAGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTTCACTCCTTTCGCCATaGAGCTCAGGGCCGCATCAG +
Preference number: 4 (lower is better)
Translates to: RSDFLDETDTSVCVSSALSLLSP*SSGPHQ
Trigger: CTGATGCGGCCCTGAGCTCCATGGCGAAAGGAGTGA...AAGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCAAGATGGAAGCCACTCTaGGTGGCAGGAGAGCTAGAC +
Preference number: 4 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSRWKPL*VAGELD
Trigger: GTCTAGCTCTCCTGCCACCCAGAGTGGCTTCCATCT...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACAACAGCTCGTTTCCCCTaGGTCCTCTGTGTAGTTAAC +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTTARFP*VLCVVN
Trigger: GTTAACTACACAGAGGACCCAGGGGAAACGAGCTGT...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATACTCTAAGGTGTGTGTaGGGACACTGCCCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHTLRCV*GHCPAC
Trigger: ACAGGCCGGGCAGTGTCCCCACACACACCTTAGAGT...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATCCGGAAGGGATCTTTTaGGCAAGTGACAGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNPEGIF*ASDSGA
Trigger: GGCCCCGCTGTCACTTGCCCAAAAGATCCCTTCCGG...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATCGTGGTCAGCCCCAGTaGCGAGAAACCCTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNRGQPQ*RETLQA
Trigger: AGCTTGCAGGGTTTCTCGCCACTGGGGCTGACCACG...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGGAATCCTGAGGGATTaGGGCGGTTTTTGTGTTTTG +
Preference number: 4 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLGILRD*GGFCVL
Trigger: CAAAACACAAAAACCGCCCCAATCCCTCAGGATTCC...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATCTGAGGACGGACAGCTaGGTTCTCACTTCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHLRTDS*VLTSGA
Trigger: GGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAG...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGACTATTTTCCCCCAACTaGCAAGTCTCAACTCTCTAT +
Preference number: 4 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRLFSPN*QVSTLY
Trigger: ATAGAGAGTTGAGACTTGCCAGTTGGGGGAAAATAG...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CACAGGAGCAGCAAGCTTGCTCCTGACAGCATGGCTCTCACACAGCATCCTCCCATCTACATTGACCACTaGAATATGAACGTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: HRSSKLAPDSMALTQHPPIYIDH*NMNVFL
Trigger: TAGAAACACGTTCATATTCCAGTGGTCAATGTAGAT...GGGAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AATTTTTGCATGAACACTGAGGAAAGGCCCAAAGATCCATCTAGAGCAGGTGGGCTCACATCAGGCTTCTaGCAAGAGCCTTCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: NFCMNTEERPKDPSRAGGLTSGF*QEPSQE
Trigger: CTCCTGAGAAGGCTCTTGCCAGAAGCCTGATGTGAG...CCCACCTGCTCTAGATGGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AATTTTTGCATGAACACTGAGGAAAGGCCCAAAGATCCATCTAGAGCAGGTGGGACTGCTAAAAGCACGTaGCCCTTCAGGGTGACCTGT +
Preference number: 4 (lower is better)
Translates to: NFCMNTEERPKDPSRAGGTAKST*PFRVTC
Trigger: ACAGGTCACCCTGAAGGGCCACGTGCTTTTAGCAGT...CCCACCTGCTCTAGATGGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGTTCCTGATCAGGGTCTaGGACCCACATACAGAATAT +
Preference number: 4 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKFLIRV*DPHTEY
Trigger: ATATTCTGTATGTGGGTCCCAGACCCTGATCAGGAA...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AATTATCTACACGTATCAAACTGTAAAGCAGCCCCAGTCCCACCATCCGTGAACACTCACACTGCAGCGTaGGCAGCTAAATGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: NYLHVSNCKAAPVPPSVNTHTAA*AAKWPS
Trigger: TGAAGGCCATTTAGCTGCCCACGCTGCAGTGTGAGT...GTTCACGGATGGTGGGACTGGGGCTGCTTTACAGTTTGATACGTGTAGATAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCATTCAATCTCCTCACCTaGAGCATCTGGGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSFNLLT*SIWVLS
Trigger: GCTGAGCACCCAGATGCTTCAGGTGAGGAGATTGAA...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GACCTCTATTGCCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGATTCAATCTCCTCACCTaGAGCATCTGGGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: DLYCQYVHYLKMPPYYNGFNLLT*SIWVLS
Trigger: GCTGAGCACCCAGATGCTTCAGGTGAGGAGATTGAA...TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TTGGATGAGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACCAGCAGACTCCACTGTaGCCTGAGCAGCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: LDETDTSVCVSSALSYGDQQTPL*PEQLFN
Trigger: ATTGAAGAGCTGCTCAGGTCACAGTGGAGTCTGCTG...GTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR TCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCAGGTTCAAATCCAACTTaGCTGGTGTGGGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSGSNPT*LVWAPT
Trigger: TGTGGGAGCCCACACCAGTCAAGTTGGATTTGAACC...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR TCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTATCTCGGGCTTCCCTCTaGAGCTTAATTTCACGAAAA +
Preference number: 4 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLSRASL*SLISRK
Trigger: TTTTCGTGAAATTAAGCTTCAGAGGGAAGCCCGAGA...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACAAAGGCTTATTCACCTTaGTGTGCTTGTATGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTKAYSP*CACMVG
Trigger: CCCCACCATACAAGCACATCAAGGTGAATAAGCCTT...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp TCCACTGAGTTATCAACGGGTATTGTAGAGACATTCAAAGTTAGTGTTACTTGCGAAGCACTCGTCCTCTaGCTGCCTCTTCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: STELSTGIVETFKVSVTCEALVL*LPLPFP
Trigger: GGGGAAGGGAAGAGGCAGTCAGAGGACGAGTGCTTC...GCAAGTAACACTAACTTTGAATGTCTCTACAATACCCGTTGATAACTCAGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACAAGTGGGAGGGAACCTTaGCATTCGGAGAAATTCAAG +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTSGREP*HSEKFK
Trigger: CTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACT...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACAAAAGCCTGGCTCCACTaGGTTATCAACGGGTATTGT +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTKAWLH*VINGYC
Trigger: ACAATACCCGTTGATAACTCAGTGGAGCCAGGCTTT...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACTGGTGTGGGCTCCCACTTGACCACTGGAATATaGACGTGTTTCTATTATGAG +
Preference number: 4 (lower is better)
Translates to: VQYRAAGFKSNLTGVGSHLTTGI*TCFYYE
Trigger: CTCATAATAGAAACACGTTCATATTCCAGTGGTCAA...GTGGGAGCCCACACCAGTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR TCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGATGAAACATGAGGGCTaGTGCTCTATAGAAGCAACT +
Preference number: 4 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKMKHEG*CSIEAT
Trigger: AGTTGCTTCTATAGAGCATCAGCCCTCATGTTTCAT...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCATCTATCAGTTATGGGCTACCGACATTAAGACAATaGAACATGAGGGCTGATGCT +
Preference number: 4 (lower is better)
Translates to: EGAPMRWLTSNASISYGLPTLRQ*NMRADA
Trigger: AGCATCAGCCCTCATGTTTCATTGTCTTAATGTCGG...TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp ATCCTGCAACATTTGAGCAGAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATTCTGCTTTTATGAGCTaGAGGGCAAGTAAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: ILQHLSRANRGTQPALSHSAFMS*RASKPF
Trigger: AAAAGGCTTACTTGCCCTTCAGCTCATAAAAGCAGA...ATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTCTGCTCAAATGTTGCAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCTGGGTGACTGCTTATTaGACCAGAGCCATTTTTATA +
Preference number: 4 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSWVTAY*TRAIFI
Trigger: TATAAAAATGGCTCTGGTTCAATAAGCAGTCACCCA...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TTTTGCTTTCTCCATAATATAGAGGGAGCACCTATGCGCTGGCTGACTTCTAATCAGCAAGCTTGCTCCTaGCAGCATGGCTCTCACACA +
Preference number: 4 (lower is better)
Translates to: FCFLHNIEGAPMRWLTSNQQACS*QHGSHT
Trigger: TGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTG...ATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTCTATATTATGGAGAAAGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TGTGCACTACCTGAAGATGCCACCCTATTACAATGGAGTACTTACGTTTTTAGACAGGCCCAGACGCAGTaGCTGATGTCAGCCATCAGA +
Preference number: 4 (lower is better)
Translates to: CALPEDATLLQWSTYVFRQAQTQ*LMSAIR
Trigger: TCTGATGGCTGACATCAGTCACTGCGTCTGGGCCTG...TCTAAAAACGTAAGTACTCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TTTTGCTTTCTCCATAATATAGAGGGAGCACCTATGCGCTGGCTGACTTCTAATCTGGGGGTGAGTCTCTaGGAACAGAGGAAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: FCFLHNIEGAPMRWLTSNLGVSL*EQRKSP
Trigger: TGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAG...ATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTCTATATTATGGAGAAAGCAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCAGCCATGCTGCGGCACTaGGCTCCGAGCAGCTTAGCT +
Preference number: 4 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSAMLRH*APSSLA
Trigger: AGCTAAGCTGCTCGGAGCTCAGTGCCGCAGCATGGC...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TTTTGCTTTCTCCATAATATAGAGGGAGCACCTATGCGCTGGCTGACTTCTAATATGAGGCTCATTTCCTaGTCAGGGTCTGGGACCCAC +
Preference number: 4 (lower is better)
Translates to: FCFLHNIEGAPMRWLTSNMRLIS*SGSGTH
Trigger: GTGGGTCCCAGACCCTGATCAGGAAATGAGCCTCAT...ATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTCTATATTATGGAGAAAGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp AACAGCAATTCTCATGGTCACCTAACTCATATCAGAATCGGGCCCAGCAGTCAAACCACTGAGTTGGTTTaGGTCCCTGCAGAAAATCCC +
Preference number: 4 (lower is better)
Translates to: NSNSHGHLTHIRIGPSSQTTELV*VPAENP
Trigger: GGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGT...TTGACTGCTGGGCCCGATTCTGATATGAGTTAGGTGACCATGAGAATTGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420906.6
CDS-3UTR TCA 90 bp AATTATCTACACGTATCAAACTGTAAAGCAGCCCCAGTCCCACCATCCGTGAACACCACTGAGTTGGTTTaGGTCCCTGCAGAAAATCCC +
Preference number: 4 (lower is better)
Translates to: NYLHVSNCKAAPVPPSVNTTELV*VPAENP
Trigger: GGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGT...GTTCACGGATGGTGGGACTGGGGCTGCTTTACAGTTTGATACGTGTAGATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp TCTCGACCACCACTGAGTTGGTTTGAGTCCCTGCAGAAAATCCCACTCGGAGGAAGCCTTCGATATACATaGCTTAGGATCAGGAATAAC +
Preference number: 4 (lower is better)
Translates to: SRPPLSWFESLQKIPLGGSLRYT*LRIRNN
Trigger: GTTATTCCTGATCCTAAGTCATGTATATCGAAGGCT...TCCTCCGAGTGGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp AGAGTGGGAGGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGACAGAAAGGGGACTCTaGTTGATGCTAAATTCCATC +
Preference number: 4 (lower is better)
Translates to: RVGGNLDIRRNSSVAVTLTERGL*LMLNSI
Trigger: GATGGAATTTAGCATCAAGCAGAGTCCCCTTTCTGT...CAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGACAGAAAGGGGACTCTaGTTGATGCTAAATTCCATC +
Preference number: 4 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKTERGL*LMLNSI
Trigger: GATGGAATTTAGCATCAAGCAGAGTCCCCTTTCTGT...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCACCTGCTTCATCTTTATaGACTTTACAACACTCTGAA +
Preference number: 4 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPPASSL*TLQHSE
Trigger: TTCAGAGTGTTGTAAAGTGCATAAAGATGAAGCAGG...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGCCTGCTTCATCTTTATaGACTTTACAACACTCTGAA +
Preference number: 4 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGPASSL*TLQHSE
Trigger: TTCAGAGTGTTGTAAAGTGCATAAAGATGAAGCAGG...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CGACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATATACGCCGAGGATTTCTGGTaGCTGCTTCATCTTTATGCA +
Preference number: 4 (lower is better)
Translates to: RPRYTGLMHYSKSKPSIYAEDFW*LLHLYA
Trigger: TGCATAAAGATGAAGCAGGCACCAGAAATCCTCGGC...GTATATCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp AGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGAAGGTCTTCCCGTTGGCACTaGCGAGGATTTCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: RNMMHTMGSMHHLQNVGRSSRWH*RGFLVP
Trigger: AGGCACCAGAAATCCTCGGCAGTGCCAACGGGAAGA...CCTTCCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCACTTAGACACAAGAGCTaGTTCGACAAGGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSLRHKS*FDKALL
Trigger: GAGCAGGGCCTTGTCGAAGCAGCTCTTGTGTCTAAG...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGTACGTGATACTGGCGTaGACTCTTTTTCTGACCTTT +
Preference number: 4 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSEYVILA*TLFLTF
Trigger: AAAGGTCAGAAAAAGAGTGCACGCCAGTATCACGTA...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATATACAAAGACTCTGCAGCAATaGCAGCCTCCTTGGCTACTT +
Preference number: 4 (lower is better)
Translates to: DPATLASCITLNQSLRYTKTLQQ*QPPWLL
Trigger: AAGTAGCCAAGGAGGCTGGCATTGCTGCAGAGTCTT...TGTATATCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp GTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCTTTCTCCCAAAGACTCTaGAGCAATGCCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: VCTMIRHLQQHPGILHHSFSQRL*SNASLL
Trigger: AAGGAGGCTGGCATTGCTGCAGAGTCTTTGGGAGAA...AGAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000678714.1
CDS-3UTR GCA 90 bp AACAGCAATTCTCATGGTCACCTAACTCATATCAGAATCGGGCCCAGCAGTCAAGACCAAAAACTGGGATaGTGCATCTCCCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: NSNSHGHLTHIRIGPSSQDQKLG*CISLPA
Trigger: AGCAGGAAGGGAGATGCAGCATCCCAGTTTTTGGTC...TTGACTGCTGGGCCCGATTCTGATATGAGTTAGGTGACCATGAGAATTGCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420906.6
CDS-3UTR GCA 90 bp GGCCCCCAGTTATCATCTCCTCATAAACATGACAAAAACAGGACCCATGTCTACGACCAAAAACTGGGATaGTGCATCTCCCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GPQLSSPHKHDKNRTHVYDQKLG*CISLPA
Trigger: AGCAGGAAGGGAGATGCAGCATCCCAGTTTTTGGTC...GTAGACATGGGTCCTGTTTTTGTCATGTTTATGAGGAGATGATAACTGGGGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp CCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATATACATGCTCTTCCGAAGACTGTaGTTGTCCGTCCTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: PRYTGLMHYSKSKPSIYMLFRRL*LSVLSL
Trigger: AAGACTCAGGACGGACAAGCACAGTCTTCGGAAGAG...CATGTATATCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp GGCCCCCAGTTATCATCTCCTCATAAACATGACAAAAACAGGACCCATGTCTACCTCTTCCGAAGACTGTaGTTGTCCGTCCTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: GPQLSSPHKHDKNRTHVYLFRRL*LSVLSL
Trigger: AAGACTCAGGACGGACAAGCACAGTCTTCGGAAGAG...GTAGACATGGGTCCTGTTTTTGTCATGTTTATGAGGAGATGATAACTGGGGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp CCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTCCCAGCCCTGCATTACATCATTCTAAGTaGAGTACAGAGCAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: PKFHPNDILEVQLLPSPALHHSK*STEQLG
Trigger: ACCCAGCTGCTCTGTACTGCACTTAGAATGATGTAA...TGCAGGGCTGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp AGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCAGTTTGTGTTTCGTCTaGACTTTCGTATGGGGACTC +
Preference number: 4 (lower is better)
Translates to: RYFSLCFVCTFVWGLRGLSLCFV*TFVWGL
Trigger: GAGTCCCCATACGAAAGTGCAGACGAAACACAAACT...GAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR GCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCACATTGCAGAACCAGCTaGCGTCAGGCATCTCGATGT +
Preference number: 4 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSHCRTS*RQASRC
Trigger: ACATCGAGATGCCTGACGGCAGCTGGTTCTGCAATG...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATGCTTCTTCCCAGCCCTaGAGTCATTGCAGAACCAGC +
Preference number: 4 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHASSQP*SHCRTS
Trigger: GCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAGC...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACACATTTCAGAGGAGATTATTCACCTTGATGTaGTTGTATGGTGGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: DEFLATLGKSLRYTFQRRLFTLM*LYGGGL
Trigger: CAAGCCCCCACCATACAAGCACATCAAGGTGAATAA...TCTCCTCTGAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATCCCCGAGGAATCCACTaGAATTGGAGGCTCCACACC +
Preference number: 4 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNPRGIH*NWRLHT
Trigger: GGTGTGGAGCCTCCAATTGCAGTGGATTCCTCGGGG...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATGGTGGTAGGCCTTGGTaGAGAACTTGCGGTCACACA +
Preference number: 4 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHGGRPW*RTCGHT
Trigger: TGTGTGACCGCAAGTTCTGCACCAAGGCCTACCACC...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TTGGATGAGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACATCTTACAACACCATTaGTGCCACCACCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LDETDTSVCVSSALSYGDILQHH*CHHLQG
Trigger: GCCCTGCAGGTGGTGGCAGCAATGGTGTTGTAAGAT...GTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCAATCTTACAACACCATTaGTGCCACCACCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSILQHH*CHHLQG
Trigger: GCCCTGCAGGTGGTGGCAGCAATGGTGTTGTAAGAT...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCTTCTGTAAACTTCTCTaGAAGATGGATGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: RYFSLCFVCTFVWGLRGLFCKLL*KMDVSP
Trigger: GGGGGACACATCCATCTTGCAGAGAAGTTTACAGAA...GAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATCTGGAAGATGGGCACTaGACACGCCGGGGTTTAGAT +
Preference number: 4 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHLEDGH*TRRGLD
Trigger: ATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAG...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGACGTGCAAAGCCCTGCTaGAGCTCTGGACAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: FLKILYAWMVSMLQNITRRAKPC*SSGQPP
Trigger: TGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACG...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCTTTACTTTGGGTGACTaGTTATTGAACCAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSFTLGD*LLNQSH
Trigger: ATGGCTCTGGTTCAATAAGCAGTCACCCAAAGTAAA...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TGCTCTATAGAAGCAACTGATGCAGAGGTTGGTGTACATAACCTGATTACAGTAGAGTTCACTTGCCCCTaGCCACCTTCCCAATGTCCC +
Preference number: 4 (lower is better)
Translates to: CSIEATDAEVGVHNLITVEFTCP*PPSQCP
Trigger: GGGACATTGGGAAGGTGGGCAGGGGCAAGTGAACTC...TACTGTAATCAGGTTATGTACACCAACCTCTGCATCAGTTGCTTCTATAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGATTCAGGACCTCTATTaGCAATATGTGCACTACCTG +
Preference number: 4 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKIQDLY*QYVHYL
Trigger: CAGGTAGTGCACATATTGGCAATAGAGGTCCTGAAT...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TGTGCACTACCTGAAGATGCCACCCTATTACAATGGAGTACTTACGTTTTTAGACCCTGCCATCACAGGTaGCACACACTCACATCAGGC +
Preference number: 4 (lower is better)
Translates to: CALPEDATLLQWSTYVFRPCHHR*HTLTSG
Trigger: GCCTGATGTGAGTGTGTGGCACCTGTGATGGCAGGG...TCTAAAAACGTAAGTACTCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GACCTCTATTGCCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGATTATACTGGCTTCCATaGCGGGACACAGAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: DLYCQYVHYLKMPPYYNGLYWLP*RDTEED
Trigger: GTCCTCCTCTGTGTCCCGGCATGGAAGCCAGTATAA...TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TTTTGCTTTCTCCATAATATAGAGGGAGCACCTATGCGCTGGCTGACTTCTAATCAGAGGAGCCTCTGCTaGCAAGGCAACCCTTTCAAC +
Preference number: 4 (lower is better)
Translates to: FCFLHNIEGAPMRWLTSNQRSLC*QGNPFN
Trigger: GTTGAAAGGGTTGCCTTGGCAGCAGAGGCTCCTCTG...ATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTCTATATTATGGAGAAAGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AAACCAGGAGATGGTCCTCTCGGAAAACTCCGCTCCTCTAGGATGAGCCCACTCAGAAATGAAGCAAGTTaGCAAAGTCATAACGACCTT +
Preference number: 4 (lower is better)
Translates to: KPGDGPLGKLRSSRMSPLRNEAS*QSHNDL
Trigger: AAGGTCGTTATGACTTTGGCAACTTGCTTCATTTCT...GAGTGGGCTCATCCTAGAGGAGCGGAGTTTTCCGAGAGGACCATCTCCTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TTTTGCTTTCTCCATAATATAGAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCAGACAGCAGGCTGTaGACTGTCTGCGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: FCFLHNIEGAPMRWLTSNADSRL*TVCEGL
Trigger: AAGTCCTTCGCAGACAGTGCACAGCCTGCTGTCTGC...ATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTCTATATTATGGAGAAAGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCACCTGGTCTGGCCGACTaGAGACAGCAGGCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSPGLAD*RQQAVH
Trigger: GTGCACAGCCTGCTGTCTGCAGTCGGCCAGACCAGG...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TTTTGCTTTCTCCATAATATAGAGGGAGCACCTATGCGCTGGCTGACTTCTAATCTCCCAGAGCACCACTaGACACCACAGTCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: FCFLHNIEGAPMRWLTSNLPEHH*TPQSSS
Trigger: AGAAGACGACTGTGGTGTGCAGTGGTGCTCTGGGAG...ATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTCTATATTATGGAGAAAGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ATCCTGCAACATTTGAGCAGAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATGTCCATGACACAGATTaGAGAGATTCCGACTTTTTC +
Preference number: 4 (lower is better)
Translates to: ILQHLSRANRGTQPALSHVHDTD*RDSDFF
Trigger: GAAAAAGTCGGAATCTCTGCAATCTGTGTCATGGAC...ATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTCTGCTCAAATGTTGCAGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCATCTATCAGTTATGGGCTAACTGCCGAGGATTTCTaGTGCCTGCTTCATCTTTAT +
Preference number: 4 (lower is better)
Translates to: EGAPMRWLTSNASISYGLTAEDF*CLLHLY
Trigger: ATAAAGATGAAGCAGGCACCAGAAATCCTCGGCAGT...TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGATCCCTTTCATTTCCTaGGACTCAAAACGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: NKVVLEDGHCTRRGLDVKIPFIS*DSKRSL
Trigger: CAAACTGCGTTTTGAGTCCCAGGAAATGAAAGGGAT...CTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGGTCTCTTCCAGTGTTTaGACAAGACTCTTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSEVSSSV*TRLFLS
Trigger: GCTAAGAAAGAGTCTTGTCCAAACACTGGAAGAGAC...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGATTGTATTTCAACAGGTaGTCTTTGTCTCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRLYFNR*SLSLPV
Trigger: CACTGGAAGAGACAAAGACCACCTGTTGAAATACAA...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CAGGGCCGCATCAGTAAACACACACTTCAGTCGGTGGTGATTTGTGAAATAGGTGGTAACCCGACACTTTaGACCACACCAAATCACCAA +
Preference number: 4 (lower is better)
Translates to: QGRISKHTLQSVVICEIGGNPTL*TTPNHQ
Trigger: TTGGTGATTTGGTGTGGTCCAAAGTGTCGGGTTACC...ACCTATTTCACAAATCACCACCGACTGAAGTGTGTGTTTACTGATGCGGCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCATCTATCAGTTATGGGCTAATAGCTGTGAAGGAGTaGATCTGCAGAAACCATGCA +
Preference number: 4 (lower is better)
Translates to: EGAPMRWLTSNASISYGLIAVKE*ICRNHA
Trigger: TGCATGGTTTCTGCAGATCCACTCCTTCACAGCTAT...TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp CGACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATATACTATCCAAGCTCTTTCTaGGGCGTCACCAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: RPRYTGLMHYSKSKPSIYYPSSF*GVTKEL
Trigger: CAGTTCTTTGGTGACGCCCCAGAAAGAGCTTGGATA...GTATATCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp TTGGATGAGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCCTTCCTGCTTCGTaGCATGGAGACTGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: LDETDTSVCVSSALSYGDSLPAS*HGDCGL
Trigger: AAGACCACAGTCTCCATGCCACGAAGCAGGAAGGGA...GTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR CCA 90 bp CGACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATATACCAGAAGACCAAAAACTaGGATGCTGCATCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: RPRYTGLMHYSKSKPSIYQKTKN*DAASPF
Trigger: GAAGGGAGATGCAGCATCCCAGTTTTTGGTCTTCTG...GTATATCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp CCATCTGTAGTTCCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTAGGAGGCTGCCTCCATaGCCTTGTAAGAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: PSVVPKFHPNDILEVQLLRRLPP*PCKSLF
Trigger: GAACAAGCTCTTACAAGGCCATGGAGGCAGCCTCCT...AAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGGAACTACAGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp TCCACTGAGTTATCAACGGGTATTGTAGAGACATTCAAAGTTAGTGTTACTTGCACGTTGACGTGGGCGTaGTGTCGCTTCCCCTTCCGA +
Preference number: 4 (lower is better)
Translates to: STELSTGIVETFKVSVTCTLTWA*CRFPFR
Trigger: TCGGAAGGGGAAGCGACACCACGCCCACGTCAACGT...GCAAGTAACACTAACTTTGAATGTCTCTACAATACCCGTTGATAACTCAGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACATTGGGGGAACATTTTTaGGATGGCAAACTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTLGEHF*DGKLLP
Trigger: CGGCAGAAGTTTGCCATCCCAAAAATGTTCCCCCAA...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CAGGGCCGCATCAGTAAACACACACTTCAGTCGGTGGTGATTTGTGAAATAGGTGAATTGGGGCAGAGGTaGCAAAATGAAGTCGAAGGT +
Preference number: 4 (lower is better)
Translates to: QGRISKHTLQSVVICEIGELGQR*QNEVEG
Trigger: ACCTTCGACTTCATTTTGCCACCTCTGCCCCAATTC...ACCTATTTCACAAATCACCACCGACTGAAGTGTGTGTTTACTGATGCGGCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACAGAATTGGGGCAGAGGTaGCAAAATGAAGTCGAAGGT +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTELGQR*QNEVEG
Trigger: ACCTTCGACTTCATTTTGCCACCTCTGCCCCAATTC...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATACTCTAAGGTGTGTGTaGGGACACTGCCCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNTLRCV*GHCPAC
Trigger: ACAGGCCGGGCAGTGTCCCCACACACACCTTAGAGT...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TGCTGTTTTGACGTAAGCATTGGTAGTCCCTTACCTGCCGGAAGGGATCTTTTGGGAATCCTGAGGGATTaGGGCGGTTTTTGTGTTTTG +
Preference number: 4 (lower is better)
Translates to: CCFDVSIGSPLPAGRDLLGILRD*GGFCVL
Trigger: CAAAACACAAAAACCGCCCCAATCCCTCAGGATTCC...CAAAAGATCCCTTCCGGCAGGTAAGGGACTACCAATGCTTACGTCAAAACAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TATAAGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGCCTTCCTGGGGACCATaGCAGAGACCTGGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: YKEHDAHYGIYASPSKCRPSWGP*QRPGQK
Trigger: CTTCTGGCCAGGTCTCTGCCATGGTCCCCAGGAAGG...CCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp TCCTCGTCGATCAGCTCCCCAACGTACTCGTTAACAAATTCTCCCTTTCTGATGTTGTCCATTTTCTTCTaGCTGAGACACATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SSSISSPTYSLTNSPFLMLSIFF*LRHISS
Trigger: GCTGCTGATGTGTCTCAGTCAGAAGAAAATGGACAA...CATCAGAAAGGGAGAATTTGTTAACGAGTACGTTGGGGAGCTGATCGACGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp GTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCTCCAAAGAACTGTACGTaGTACTGGCGTGCACTCTTT +
Preference number: 4 (lower is better)
Translates to: VCTMIRHLQQHPGILHHSPKNCT*YWRALF
Trigger: AAAGAGTGCACGCCAGTATCACGTACAGTTCTTTGG...AGAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000678714.1
CDS-3UTR TCA 90 bp AGTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCTTCTTCACTGACTCCTaGGGATTCTGCCATTTCTCC +
Preference number: 4 (lower is better)
Translates to: SVYDDTPPAAASWNITSFFFTDS*GFCHFS
Trigger: GGAGAAATGGCAGAATCCTCAGGAGTCAGTGAAGAA...GAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000678714.1
CDS-3UTR TCA 90 bp GACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATATACATTCTTCACTGACTCCTaGGGATTCTGCCATTTCTCC +
Preference number: 4 (lower is better)
Translates to: DPATLASCITLNQSLRYTFFTDS*GFCHFS
Trigger: GGAGAAATGGCAGAATCCTCAGGAGTCAGTGAAGAA...TGTATATCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR TCA 90 bp GGCCCCCAGTTATCATCTCCTCATAAACATGACAAAAACAGGACCCATGTCTACTTCTTCACTGACTCCTaGGGATTCTGCCATTTCTCC +
Preference number: 4 (lower is better)
Translates to: GPQLSSPHKHDKNRTHVYFFTDS*GFCHFS
Trigger: GGAGAAATGGCAGAATCCTCAGGAGTCAGTGAAGAA...GTAGACATGGGTCCTGTTTTTGTCATGTTTATGAGGAGATGATAACTGGGGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp CTCCTCATAAACATGACAAAAACAGGACCCATGTCTACAATGAGAAAAACAGCATTCCCTATGTCGGGGTaGCTCTCCAGGGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LLINMTKTGPMSTMRKTAFPMSG*LSRVSA
Trigger: TGCAGAGACCCTGGAGAGTCACCCCGACATAGGGAA...TGCTGTTTTTCTCATTGTAGACATGGGTCCTGTTTTTGTCATGTTTATGAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp ACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCTCAGACTTTTTGGATaGGACAGATACTTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: TSVCVSSALSYGDSEGSSLRLFG*DRYFSL
Trigger: CAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGAG...AGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR TCA 90 bp TCCACTGAGTTATCAACGGGTATTGTAGAGACATTCAAAGTTAGTGTTACTTGCGGTACTGGCGCTTGGTaGAGCACTGGTTCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: STELSTGIVETFKVSVTCGTGAW*STGSGR
Trigger: TCTGCCAGAACCAGTGCTTCACCAAGCGCCAGTACC...GCAAGTAACACTAACTTTGAATGTCTCTACAATACCCGTTGATAACTCAGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATGCATGTAGAAGTGGGTaGTGTCGTTCTCGTGTGCGT +
Preference number: 4 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHACRSG*CRSRVR
Trigger: ACGCACACGAGAACGACATCACCCACTTCTACATGC...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp GATATCCTGGAAGTGCAGCTTCTTCCCAGCCCTGCAGTCATTGCAGAACCAGCTGTCGGTGGTGATTTGTaGAATAGGTTTAGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: DILEVQLLPSPAVIAEPAVGGDL*NRFSKN
Trigger: ATTTTTGCTAAACCTATTTCACAAATCACCACCGAC...AGCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAGCTGCACTTCCAGGATATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATGGCAGAGGGCACATGTaGTCAGCAGAGACTGCATCT +
Preference number: 4 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNGRGHM*SAETAS
Trigger: AGATGCAGTCTCTGCTGATCACATGTGCCCTCTGCC...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATAAAAGCACCTGCTGCTaGATGTTCTCTCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHKSTCC*MFSPSL
Trigger: GAGGGAGGGAGAGAACATTCAGCAGCAGGTGCTTTT...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATGATGCCAAGGAATCCTaGGGGATTGGGGCGGTTTTT +
Preference number: 4 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHDAKES*GIGAVF
Trigger: AAAAACCGCCCCAATCCCTCAGGATTCCTTGGCATC...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CATGCACTCCTCCTCGTCGATCAGCTCCCCAACGTACTCGTTAACAAATTCTCCTTTGTATTTAATTTCTaGCGGGGCATTTCACACCTC +
Preference number: 4 (lower is better)
Translates to: HALLLVDQLPNVLVNKFSFVFNF*RGISHL
Trigger: GAGGTGTGAAATGCCCCGTCAGAAATTAAATACAAA...GGAGAATTTGTTAACGAGTACGTTGGGGAGCTGATCGACGAGGAGGAGTGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp AATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGTTTGTATTTAATTTCTaGCGGGGCATTTCACACCTC +
Preference number: 4 (lower is better)
Translates to: NKVVLEDGHCTRRGLDVKFVFNF*RGISHL
Trigger: GAGGTGTGAAATGCCCCGTCAGAAATTAAATACAAA...CTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TGCTGTTTTGACGTAAGCATTGGTAGTCCCTTACCTGCCGGAAGGGATCTTTTGAACTATCAAACCTGGTaGCAGCACCCAGTATTCCTA +
Preference number: 4 (lower is better)
Translates to: CCFDVSIGSPLPAGRDLLNYQTW*QHPVFL
Trigger: TAGGAATACTGGGTGCTGTCACCAGGTTTGATAGTT...CAAAAGATCCCTTCCGGCAGGTAAGGGACTACCAATGCTTACGTCAAAACAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp AGTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCACTCGCATGGTACTGTaGATAGCACACCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: SVYDDTPPAAASWNITSFTRMVL*IAHLLL
Trigger: AAGCAGAAGGTGTGCTATTCACAGTACCATGCGAGT...GAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR TCA 90 bp AGTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCTGTAAAGAAGGAAGCTaGTGGCGAGAAGTACCTCCA +
Preference number: 4 (lower is better)
Translates to: SVYDDTPPAAASWNITSFCKEGS*WREVPP
Trigger: TGGAGGTACTTCTCGCCATCAGCTTCCTTCTTTACA...GAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR TCA 90 bp GAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCATCTATCAGTTATGGGCTAGGAATGCAGTCTCCTTaGTCTATTACAGGGACTTTT +
Preference number: 4 (lower is better)
Translates to: EGAPMRWLTSNASISYGLGMQSP*SITGTF
Trigger: AAAAGTCCCTGTAATAGATCAAGGAGACTGCATTCC...TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp CCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATATACATGTGCGCTTATGAAGTCTaGGCATTACTCACACTGCAG +
Preference number: 4 (lower is better)
Translates to: PRYTGLMHYSKSKPSIYMCAYEV*ALLTLQ
Trigger: CTGCAGTGTGAGTAATGCTCAGACTTCATAAGCGCA...CATGTATATCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp GAGCCTAGGTCTGGAAGCAACAGGAATCAGGTGTGGTGTGTGAGTCGCCTTCCAGTGTCCAGAATTTTATaGCCAGGTAAATTATCATTC +
Preference number: 4 (lower is better)
Translates to: EPRSGSNRNQVWCVSRLPVSRIL*PGKLSF
Trigger: GAATGATAATTTACCTGGGCATAAAATTCTGGACAC...TGGAAGGCGACTCACACACCACACCTGATTCCTGTTGCTTCCAGACCTAGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420906.6
CDS-3UTR GCA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCGGAGGACACCTGACGTaGAGCAATAGGGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TGNSNVLRLECITIILRFGGHLT*SNRGLL
Trigger: CAGCAGCCCCCTATTGCTGCACGTCAGGTGTCCTCC...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503128.5
CDS-3UTR GCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATTGCGGTCATGGATGCTaGTGCATCTCCTGCAACGCA +
Preference number: 4 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNCGHGC*CISCNA
Trigger: TGCGTTGCAGGAGATGCAGCAGCATCCATGACCGCA...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
CDS-3UTR GCA 90 bp GGCCTCGACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGACCTGCTTCATCTTTATaGACTTTACAACACTCTGAA +
Preference number: 4 (lower is better)
Translates to: GLDPATLASCITLNQSLRPASSL*TLQHSE
Trigger: TTCAGAGTGTTGTAAAGTGCATAAAGATGAAGCAGG...TCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTCGAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGAGGATTTCTGGTGCCTaGTTCATCTTTATGCACTTT +
Preference number: 4 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSERISGA*FIFMHF
Trigger: AAAGTGCATAAAGATGAAGCAGGCACCAGAAATCCT...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CTGAGCATTACTCACACTGCAGCGTGGGCAGCTAAATGGCCTTCATACCAATGCAGGATTTCTGGTGCCTaGTTCATCTTTATGCACTTT +
Preference number: 4 (lower is better)
Translates to: LSITHTAAWAAKWPSYQCRISGA*FIFMHF
Trigger: AAAGTGCATAAAGATGAAGCAGGCACCAGAAATCCT...GCATTGGTATGAAGGCCATTTAGCTGCCCACGCTGCAGTGTGAGTAATGCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTTCTTCCCGTTGGCACTaGCGAGGATTTCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTSSRWH*RGFLVP
Trigger: AGGCACCAGAAATCCTCGGCAGTGCCAACGGGAAGA...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GACCTCTATTGCCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGAGCTCCTCCACTGACATaGTTGCAGCTTCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: DLYCQYVHYLKMPPYYNGAPPLT*LQLLLL
Trigger: AAGCAGAAGAAGCTGCAAGCATGTCAGTGGAGGAGC...TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GACCTCTATTGCCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGATTCTCCCAAAGACTCTaGAGCAATGCCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: DLYCQYVHYLKMPPYYNGFSQRL*SNASLL
Trigger: AAGGAGGCTGGCATTGCTGCAGAGTCTTTGGGAGAA...TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCTTCTCTTCATGGGAATaGACTCTTCTCTCACAGACT +
Preference number: 4 (lower is better)
Translates to: RYFSLCFVCTFVWGLRGLFSSWE*TLLSQT
Trigger: AGTCTGTGAGAGAAGAGTGCATTCCCATGAAGAGAA...GAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp GACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACACATTTCAGAGGAGATTCTCTTCATGGGAATaGACTCTTCTCTCACAGACT +
Preference number: 4 (lower is better)
Translates to: DEFLATLGKSLRYTFQRRFSSWE*TLLSQT
Trigger: AGTCTGTGAGAGAAGAGTGCATTCCCATGAAGAGAA...TCTCCTCTGAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TCTGCCTTTCACGACATGAAAGGTTGTGTCATGAAACCTCGCTTAAGTTTCCTAACTCTCCAGGGTCTCTaGAGAGCTACACAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: SAFHDMKGCVMKPRLSFLTLQGL*RATQFG
Trigger: GCCAAACTGTGTAGCTCTGCAGAGACCCTGGAGAGT...TAGGAAACTTAAGCGAGGTTTCATGACACAACCTTTCATGTCGTGAAAGGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ACAAATGTGGACCTAACACGTAACCATGGAGTTCAAAGGTATCCAACCAAAAAGCTGCATCTCCCTTCCTaGTTCGTGGCATGGAGACTG +
Preference number: 4 (lower is better)
Translates to: TNVDLTRNHGVQRYPTKKLHLPS*FVAWRL
Trigger: CAGTCTCCATGCCACGAAGCAGGAAGGGAGATGCAG...CTTTTTGGTTGGATACCTTTGAACTCCATGGTTACGTGTTAGGTCCACATTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTCTTGAGCGAGGAGGCTaGCTCCATGGCCTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTLERGG*LHGLVR
Trigger: TCTTACAAGGCCATGGAGGCAGCCTCCTCGCTCAAG...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATCTTGAGCGAGGAGGCTaGCTCCATGGCCTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNLERGG*LHGLVR
Trigger: TCTTACAAGGCCATGGAGGCAGCCTCCTCGCTCAAG...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp AATGATCACAATGGCAGTTTCGAGGAATCCAGGGTCAGTCCTCACACGGGCCTCCTTCAGTGGTTTACATaGATCAGACAGATTTTTCGT +
Preference number: 4 (lower is better)
Translates to: NDHNGSFEESRVSPHTGLLQWFT*IRQIFR
Trigger: ACGAAAAATCTGTCTGATGCATGTAAACCACTGAAG...GAGGCCCGTGTGAGGACTGACCCTGGATTCCTCGAAACTGCCATTGTGATCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GGCCTCGACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGACTTCAGTGGTTTACATaGATCAGACAGATTTTTCGT +
Preference number: 4 (lower is better)
Translates to: GLDPATLASCITLNQSLRLQWFT*IRQIFR
Trigger: ACGAAAAATCTGTCTGATGCATGTAAACCACTGAAG...TCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTCGAGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp TGGCACACATACTCCTTTTTGGCAGTCACTCCTCGCTCAGACTTTTTGGATGAGAGTTTGTGTTTCGTCTaGACTTTCGTATGGGGACTC +
Preference number: 4 (lower is better)
Translates to: WHTYSFLAVTPRSDFLDESLCFV*TFVWGL
Trigger: GAGTCCCCATACGAAAGTGCAGACGAAACACAAACT...CTCATCCAAAAAGTCTGAGCGAGGAGTGACTGCCAAAAAGGAGTATGTGTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp CGCTCAGACTTTTTGGATGAGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTGGGATGGCAAACTTCTaGCGGCCACCATCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: RSDFLDETDTSVCVSSALGMANF*RPPSVV
Trigger: AACTACAGATGGTGGCCGGCAGAAGTTTGCCATCCC...AAGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATTGTATGGTGGGGGCTTaGGCTCGCTCTCCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNCMVGA*ARSPVF
Trigger: AAACACAGGAGAGCGAGCGCAAGCCCCCACCATACA...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CAGACTTTTTGGATGAGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGTGGTGGTAGGCCTTGGTaGAGAACTTGCGGTCACACA +
Preference number: 4 (lower is better)
Translates to: QTFWMRQILQFVFRLHFRGGRPW*RTCGHT
Trigger: TGTGTGACCGCAAGTTCTGCACCAAGGCCTACCACC...ACGAAAGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAAAAAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp TCCACTGAGTTATCAACGGGTATTGTAGAGACATTCAAAGTTAGTGTTACTTGCCAAAGGCACACATGGTaGCCCCTTCTCAGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: STELSTGIVETFKVSVTCQRHTW*PLLRVL
Trigger: GAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTG...GCAAGTAACACTAACTTTGAATGTCTCTACAATACCCGTTGATAACTCAGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TGCTGTTTTGACGTAAGCATTGGTAGTCCCTTACCTGCCGGAAGGGATCTTTTGTTCTGTAAACTTCTCTaGAAGATGGATGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: CCFDVSIGSPLPAGRDLLFCKLL*KMDVSP
Trigger: GGGGGACACATCCATCTTGCAGAGAAGTTTACAGAA...CAAAAGATCCCTTCCGGCAGGTAAGGGACTACCAATGCTTACGTCAAAACAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCAATCTGCTCCCCAAAGTaGACTGCAAAGCCGATTCTG +
Preference number: 4 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSICSPK*TAKPIL
Trigger: CAGAATCGGCTTTGCAGTGCACTTTGGGGAGCAGAT...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCAGACCACATTTTAAGCTaGCCATTCGGACACATCCCC +
Preference number: 4 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSDHILS*PFGHIP
Trigger: GGGGATGTGTCCGAATGGGCAGCTTAAAATGTGGTC...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCTTCCGTGCAAAGCCCTaGTGCAGCTCTGGACAGCCC +
Preference number: 4 (lower is better)
Translates to: TGNSNVLRLECITIILRFFRAKP*CSSGQP
Trigger: GGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAA...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTGGCAGGACACCAGGCTaGTCCCCGACATTAAGACAA +
Preference number: 4 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTGRTPG*SPTLRQ
Trigger: TTGTCTTAATGTCGGGGAGCAGCCTGGTGTCCTGCC...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ACAAATGTGGACCTAACACGTAACCATGGAGTTCAAAGGTATCCAACCAAAAAGGGCAGGACACCAGGCTaGTCCCCGACATTAAGACAA +
Preference number: 4 (lower is better)
Translates to: TNVDLTRNHGVQRYPTKKGRTPG*SPTLRQ
Trigger: TTGTCTTAATGTCGGGGAGCAGCCTGGTGTCCTGCC...CTTTTTGGTTGGATACCTTTGAACTCCATGGTTACGTGTTAGGTCCACATTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGTTCACCTCTAGTGAATaGCTCAAGTTTTACACTGGA +
Preference number: 4 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKFTSSE*LKFYTG
Trigger: TCCAGTGTAAAACTTGAGGCATTCACTAGAGGTGAA...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GGACTTTTCAAGATGATATTACCAAACATAACGGAACCTAGTGAACACATTCCACCCAGCTCACAGCCCTaGCATCACAGGTGCCACACA +
Preference number: 4 (lower is better)
Translates to: GLFKMILPNITEPSEHIPPSSQP*HHRCHT
Trigger: TGTGTGGCACCTGTGATGGCAGGGCTGTGAGCTGGG...TGGAATGTGTTCACTAGGTTCCGTTATGTTTGGTAATATCATCTTGAAAAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TCTGCCTTTCACGACATGAAAGGTTGTGTCATGAAACCTCGCTTAAGTTTCCTATTATACTGGCTTCCATaGCGGGACACAGAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: SAFHDMKGCVMKPRLSFLLYWLP*RDTEED
Trigger: GTCCTCCTCTGTGTCCCGGCATGGAAGCCAGTATAA...TAGGAAACTTAAGCGAGGTTTCATGACACAACCTTTCATGTCGTGAAAGGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TGCTCTATAGAAGCAACTGATGCAGAGGTTGGTGTACATAACCTGATTACAGTACAGAGGAGCCTCTGCTaGCAAGGCAACCCTTTCAAC +
Preference number: 4 (lower is better)
Translates to: CSIEATDAEVGVHNLITVQRSLC*QGNPFN
Trigger: GTTGAAAGGGTTGCCTTGGCAGCAGAGGCTCCTCTG...TACTGTAATCAGGTTATGTACACCAACCTCTGCATCAGTTGCTTCTATAGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TGTGTCCTCAGCTTCAGCATCTTCTGTAGGGTCCTGTATCCTCTTTGTGTGGTTAGGAAGCATGCTCCTTaGTCATCCAGTATAGGAATC +
Preference number: 4 (lower is better)
Translates to: CVLSFSIFCRVLYPLCVVRKHAP*SSSIGI
Trigger: GATTCCTATACTGGATGAGCAAGGAGCATGCTTCCT...AACCACACAAAGAGGATACAGGACCCTACAGAAGATGCTGAAGCTGAGGACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR GCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAAATCCCACAGGGAGTGTaGTGGGGAGGAGCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: STTSTIYSISNEMHLERKIPQGV*WGGAWS
Trigger: AGACCAGGCTCCTCCCCAGCACACTCCCTGTGGGAT...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GGACTTTTCAAGATGATATTACCAAACATAACGGAACCTAGTGAACACATTCCATCGGGGAGGATCCAATaGTCTCGGCTCGGCAACCAC +
Preference number: 4 (lower is better)
Translates to: GLFKMILPNITEPSEHIPSGRIQ*SRLGNH
Trigger: GTGGTTGCCGAGCCGAGAGCATTGGATCCTCCCCGA...TGGAATGTGTTCACTAGGTTCCGTTATGTTTGGTAATATCATCTTGAAAAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATTCGGAGTCTTCCCGTTaGCACTGCCGAGGATTTCTG +
Preference number: 4 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNSESSR*HCRGFL
Trigger: CAGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGA...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATAGGCTACTGGAGAGCTaGGCTTTGCTGAGGAACACA +
Preference number: 4 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHRLLES*ALLRNT
Trigger: TGTGTTCCTCAGCAAAGCCCAGCTCTCCAGTAGCCT...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATAAGGGCAGGGCGTCGTaGCCGTTAAACTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNKGRAS*PLNFCM
Trigger: CATGCAGAAGTTTAACGGCCACGACGCCCTGCCCTT...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TGCTCTATAGAAGCAACTGATGCAGAGGTTGGTGTACATAACCTGATTACAGTAAAGGGCAGGGCGTCGTaGCCGTTAAACTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: CSIEATDAEVGVHNLITVKGRAS*PLNFCM
Trigger: CATGCAGAAGTTTAACGGCCACGACGCCCTGCCCTT...TACTGTAATCAGGTTATGTACACCAACCTCTGCATCAGTTGCTTCTATAGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAATCCCTTTCATTTCCTaGGACTCAAAACGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLIPFIS*DSKRSL
Trigger: CAAACTGCGTTTTGAGTCCCAGGAAATGAAAGGGAT...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCATCTATCAGTTATGGGCTAGTCTCTTCCAGTGTTTaGACAAGACTCTTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: EGAPMRWLTSNASISYGLVSSSV*TRLFLS
Trigger: GCTAAGAAAGAGTCTTGTCCAAACACTGGAAGAGAC...TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AACAGCAATTCTCATGGTCACCTAACTCATATCAGAATCGGGCCCAGCAGTCAAGGTAACCCGACACTTTaGACCACACCAAATCACCAA +
Preference number: 4 (lower is better)
Translates to: NSNSHGHLTHIRIGPSSQGNPTL*TTPNHQ
Trigger: TTGGTGATTTGGTGTGGTCCAAAGTGTCGGGTTACC...TTGACTGCTGGGCCCGATTCTGATATGAGTTAGGTGACCATGAGAATTGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420906.6
CDS-3UTR CCA 90 bp AGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGAAGGCAGAGCTACACAGTTTaGCCCTCCGCCTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: RNMMHTMGSMHHLQNVGRQSYTV*PSAFSS
Trigger: TGAAGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTG...CCTTCCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp TATAAGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGACCCTACTCCTCTTCTaGGGTCAGCCTCTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: YKEHDAHYGIYASPSKCRTLLLF*GQPLPS
Trigger: AGACGGCAGAGGCTGACCCCAGAAGAGGAGTAGGGT...CCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp TCTGCCTTTCACGACATGAAAGGTTGTGTCATGAAACCTCGCTTAAGTTTCCTATCCCTTCCTGCTTCGTaGCATGGAGACTGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: SAFHDMKGCVMKPRLSFLSLPAS*HGDCGL
Trigger: AAGACCACAGTCTCCATGCCACGAAGCAGGAAGGGA...TAGGAAACTTAAGCGAGGTTTCATGACACAACCTTTCATGTCGTGAAAGGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGAAGGCCACCAGGGCAAACTTaGTGTTGTAGCGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: RNMMHTMGSMHHLQNVGRPPGQT*CCSVLS
Trigger: AGAGAGCACGCTACAACACCAAGTTTGCCCTGGTGG...CCTTCCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp AGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGAAGGTTTTTCGTTGCTGCCTaGCTCTTGAGCGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: RNMMHTMGSMHHLQNVGRFFVAA*LLSEEA
Trigger: AGCCTCCTCGCTCAAGAGCCAGGCAGCAACGAAAAA...CCTTCCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp AATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGATTTCGCTTCTTCAGTaGTTTACATGCATCAGACAG +
Preference number: 4 (lower is better)
Translates to: NKVVLEDGHCTRRGLDVKISLLQ*FTCIRQ
Trigger: CTGTCTGATGCATGTAAACCACTGAAGAAGCGAAAT...CTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGATTTCGCTTCTTCAGTaGTTTACATGCATCAGACAG +
Preference number: 4 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSEISLLQ*FTCIRQ
Trigger: CTGTCTGATGCATGTAAACCACTGAAGAAGCGAAAT...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp ACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTATTTCGCTTCTTCAGTaGTTTACATGCATCAGACAG +
Preference number: 4 (lower is better)
Translates to: TSVCVSSALSYGDSEGSSISLLQ*FTCIRQ
Trigger: CTGTCTGATGCATGTAAACCACTGAAGAAGCGAAAT...AGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR CCA 90 bp TTTTGGATGAGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGCTGAAGATGCTGCCGTaGAAGCCCGATTTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: FWMRQILQFVFRLHFRMGLKMLP*KPDFAS
Trigger: AGAAGCGAAATCGGGCTTCCACGGCAGCATCTTCAG...CCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR CCA 90 bp AGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGAAGGCTGAAGATGCTGCCGTaGAAGCCCGATTTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: RNMMHTMGSMHHLQNVGRLKMLP*KPDFAS
Trigger: AGAAGCGAAATCGGGCTTCCACGGCAGCATCTTCAG...CCTTCCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCAGGAACATTTTTGGGATaGCAAACTTCTGCCGGCCAC +
Preference number: 4 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSGTFLG*QTSAGH
Trigger: GTGGCCGGCAGAAGTTTGCCATCCCAAAAATGTTCC...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCAGATGATCTTGGTCTCTaGGTACTGGCGCTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSDDLGL*VLALGE
Trigger: TTCACCAAGCGCCAGTACCCAGAGACCAAGATCATC...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATAAGGCTGTCCCGTCCTaGTGCTCCTTACAGAACGAA +
Preference number: 4 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHKAVPS*CSLQNE
Trigger: TTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTT...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TCCACTGAGTTATCAACGGGTATTGTAGAGACATTCAAAGTTAGTGTTACTTGCCCAGGAACGCTGAGCTaGGCTCAGACGGTCATCAGT +
Preference number: 4 (lower is better)
Translates to: STELSTGIVETFKVSVTCPGTLS*AQTVIS
Trigger: ACTGATGACCGTCTGAGCCCAGCTCAGCGTTCCTGG...GCAAGTAACACTAACTTTGAATGTCTCTACAATACCCGTTGATAACTCAGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATCACAGAGTGCTGAGATaGAAGCCACTCTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNHRVLR*KPLWVA
Trigger: TGCCACCCAGAGTGGCTTCCATCTCAGCACTCTGTG...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCCTATTTTCCCCCAACTaGCAAGTCTCAACTCTCTAT +
Preference number: 4 (lower is better)
Translates to: RYFSLCFVCTFVWGLRGLLFSPN*QVSTLY
Trigger: ATAGAGAGTTGAGACTTGCCAGTTGGGGGAAAATAG...GAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp TGCTCTATAGAAGCAACTGATGCAGAGGTTGGTGTACATAACCTGATTACAGTACTTGAGCCCAGGAGTTaGAGACCAGACTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: CSIEATDAEVGVHNLITVLEPRS*RPDWAT
Trigger: TGTTGCCCAGTCTGGTCTCCAACTCCTGGGCTCAAG...TACTGTAATCAGGTTATGTACACCAACCTCTGCATCAGTTGCTTCTATAGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398261.6
CDS-3UTR CCA 90 bp GACCTCTATTGCCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGACTTGGTCCGGGGCCTTaGATCAAAAGGGTTAAATGG +
Preference number: 4 (lower is better)
Translates to: DLYCQYVHYLKMPPYYNGLGPGP*IKRVKW
Trigger: CCATTTAACCCTTTTGATCCAAGGCCCCGGACCAAG...TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTCAATGCTGCCACACATaGGACTGTCCCTCTCACTGC +
Preference number: 4 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTQCCHT*DCPSHC
Trigger: GCAGTGAGAGGGACAGTCCCATGTGTGGCAGCATTG...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GACCTCTATTGCCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGATCCTGGCATCTGAAGTaGGACAATGCTGCCACACAT +
Preference number: 4 (lower is better)
Translates to: DLYCQYVHYLKMPPYYNGSWHLK*DNAATH
Trigger: ATGTGTGGCAGCATTGTCCCACTTCAGATGCCAGGA...TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AATTTTTGCATGAACACTGAGGAAAGGCCCAAAGATCCATCTAGAGCAGGTGGGGAATTTCTGTACTCTTaGCAAGCCAATGGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: NFCMNTEERPKDPSRAGGEFLYS*QANGPP
Trigger: GGGAGGACCATTGGCTTGCCAAGAGTACAGAAATTC...CCCACCTGCTCTAGATGGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TCTGCCTTTCACGACATGAAAGGTTGTGTCATGAAACCTCGCTTAAGTTTCCTATTGCTCCTGACAGCATaGCTCTCACACAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: SAFHDMKGCVMKPRLSFLLLLTA*LSHSIL
Trigger: GAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAA...TAGGAAACTTAAGCGAGGTTTCATGACACAACCTTTCATGTCGTGAAAGGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCGACTTTTCCCTCATTTaGAAATGCTTATACTGGCTT +
Preference number: 4 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSDFSLI*KCLYWL
Trigger: AAGCCAGTATAAGCATTTCCAAATGAGGGAAAAGTC...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GACCTCTATTGCCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGAAGCCATTTGTGGAGGTaGCACATTCACCTGTACGGT +
Preference number: 4 (lower is better)
Translates to: DLYCQYVHYLKMPPYYNGSHLWR*HIHLYG
Trigger: ACCGTACAGGTGAATGTGCCACCTCCACAAATGGCT...TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR CAA 72 bp GGCCAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTaGAAAGTGGACGTGTTATTGGCATTTCATTCAAAT +
Preference number: 4 (lower is better)
Translates to: GQASKVLRVNYT*KVDVLLAFHSN
Trigger: ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCACACTTTACAACACTCTaGACAGAAAGGGGACTCTGC +
Preference number: 4 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSHFTTL*TERGLC
Trigger: GCAGAGTCCCCTTTCTGTTCAGAGTGTTGTAAAGTG...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATCCACATAGAGAAAGGTaGACTTGGCTTTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHPHRER*TWLSAP
Trigger: AGGAGCGGAAAGCCAAGTTCACCTTTCTCTATGTGG...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp ACAAATGTGGACCTAACACGTAACCATGGAGTTCAAAGGTATCCAACCAAAAAGCAGCAGACTCCACTGTaGCCTGAGCAGCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: TNVDLTRNHGVQRYPTKKQQTPL*PEQLFN
Trigger: ATTGAAGAGCTGCTCAGGTCACAGTGGAGTCTGCTG...CTTTTTGGTTGGATACCTTTGAACTCCATGGTTACGTGTTAGGTCCACATTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TATTACATCATTCTAAGTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACCAGCAGACTCCACTGTaGCCTGAGCAGCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: YYIILSAVQSSWVQIQLDQQTPL*PEQLFN
Trigger: ATTGAAGAGCTGCTCAGGTCACAGTGGAGTCTGCTG...GTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCACTTAGAATGATGTAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000678714.1
CDS-3UTR TCA 90 bp TGTGCACTACCTGAAGATGCCACCCTATTACAATGGAGTACTTACGTTTTTAGACAGCAGACTCCACTGTaGCCTGAGCAGCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: CALPEDATLLQWSTYVFRQQTPL*PEQLFN
Trigger: ATTGAAGAGCTGCTCAGGTCACAGTGGAGTCTGCTG...TCTAAAAACGTAAGTACTCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TATAAGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGACTGAGTGTGTACGATaGTACGCCACCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: YKEHDAHYGIYASPSKCRTECVR*YATCSS
Trigger: GCTGCTGCAGGTGGCGTATCATCGTACACACTCAGT...CCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420906.6
CDS-3UTR TCA 90 bp GACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACACATTTCAGAGGAGACTCAGACTTTTTGGATaGGACAGATACTTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: DEFLATLGKSLRYTFQRRLRLFG*DRYFSL
Trigger: CAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGAG...TCTCCTCTGAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp TCTTTAGACCCAAAGAAAAACACAGGGAATTCTCCAATCTCGTGCTTCATTTTCAGTGGGCAGTGCAGATaGTGCTGTTGGAGGCGATCA +
Preference number: 4 (lower is better)
Translates to: SLDPKKNTGNSPISCFIFSGQCR*CCWRRS
Trigger: TGATCGCCTCCAACAGCATCATCTGCACTGCCCACT...GAAAATGAAGCACGAGATTGGAGAATTCCCTGTGTTTTTCTTTGGGTCTAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp TCCACTGAGTTATCAACGGGTATTGTAGAGACATTCAAAGTTAGTGTTACTTGCGGTAACGCTGAGGAGTaGGGCTGTTTGTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: STELSTGIVETFKVSVTCGNAEE*GCLSRN
Trigger: GTTCCTGGACAAACAGCCTCACTCCTCAGCGTTACC...GCAAGTAACACTAACTTTGAATGTCTCTACAATACCCGTTGATAACTCAGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCAAGTGGGAGGGAACCTTaGCATTCGGAGAAATTCAAG +
Preference number: 4 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSSGREP*HSEKFK
Trigger: CTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACT...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CATGCACTCCTCCTCGTCGATCAGCTCCCCAACGTACTCGTTAACAAATTCTCCGTCGGTGGTGATTTGTaGAATAGGTTTAGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: HALLLVDQLPNVLVNKFSVGGDL*NRFSKN
Trigger: ATTTTTGCTAAACCTATTTCACAAATCACCACCGAC...GGAGAATTTGTTAACGAGTACGTTGGGGAGCTGATCGACGAGGAGGAGTGCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGGTCGGTGGTGATTTGTaGAATAGGTTTAGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSEVGGDL*NRFSKN
Trigger: ATTTTTGCTAAACCTATTTCACAAATCACCACCGAC...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp AAACAGTCATCAACTACACTCATAGGATCAAGATATTTGGCAACTGACAGTCATAGACCCACAGAGTGCTaGGATGGAAGCCACTCTGGG +
Preference number: 4 (lower is better)
Translates to: KQSSTTLIGSRYLATDSHRPTEC*DGSHSG
Trigger: CCCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCT...ATGACTGTCAGTTGCCAAATATCTTGATCCTATGAGTGTAGTTGATGACTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp GTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCTCTCTATAGAAGCAACTaGTGCAGAGGTTGGTGTACA +
Preference number: 4 (lower is better)
Translates to: VCTMIRHLQQHPGILHHSLYRSN*CRGWCT
Trigger: TGTACACCAACCTCTGCATCAGTTGCTTCTATAGAG...AGAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR TCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAACCCAGACGCAGTGACTaGTGTCAGCCATCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: STTSTIYSISNEMHLERKPRRSD*CQPSEE
Trigger: CTCCTCTGATGGCTGACATCAGTCACTGCGTCTGGG...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCCCCAGACGCAGTGACTaGTGTCAGCCATCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: TGNSNVLRLECITIILRFPRRSD*CQPSEE
Trigger: CTCCTCTGATGGCTGACATCAGTCACTGCGTCTGGG...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATATACAATATGTCAGCTCAACTaGCACTGTGCCCTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: DPATLASCITLNQSLRYTICQLN*HCALSE
Trigger: TTCTGAAAGGGCACAGTGTCAGTTGAGCTGACATAT...TGTATATCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp CTCCTCATAAACATGACAAAAACAGGACCCATGTCTACAATGAGAAAAACAGCAAGAAGTGCCGCCTTCTaGCTCAGCAAGAGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: LLINMTKTGPMSTMRKTARSAAF*LSKSKG
Trigger: CCCCTTACTCTTGCTGAGTCAGAAGGCGGCACTTCT...TGCTGTTTTTCTCATTGTAGACATGGGTCCTGTTTTTGTCATGTTTATGAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp GGCTTCCCTCTGAAGCTTAATTTCACGAAAACGAGCTTCAGCTTCTTGCAGTGCACAGAAAGGGGACTCTaGTTGATGCTAAATTCCATC +
Preference number: 4 (lower is better)
Translates to: GFPLKLNFTKTSFSFLQCTERGL*LMLNSI
Trigger: GATGGAATTTAGCATCAAGCAGAGTCCCCTTTCTGT...GCACTGCAAGAAGCTGAAGCTCGTTTTCGTGAAATTAAGCTTCAGAGGGAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACAACAGAAAGGGGACTCTaGTTGATGCTAAATTCCATC +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTTERGL*LMLNSI
Trigger: GATGGAATTTAGCATCAAGCAGAGTCCCCTTTCTGT...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp ATCCTGCAACATTTGAGCAGAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATCCTGCTTCATCTTTATaGACTTTACAACACTCTGAA +
Preference number: 4 (lower is better)
Translates to: ILQHLSRANRGTQPALSHPASSL*TLQHSE
Trigger: TTCAGAGTGTTGTAAAGTGCATAAAGATGAAGCAGG...ATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTCTGCTCAAATGTTGCAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TCTGCCTTTCACGACATGAAAGGTTGTGTCATGAAACCTCGCTTAAGTTTCCTACAGTTTGGCATCGTGTaGGCCGGGTTCTCCATTAAA +
Preference number: 4 (lower is better)
Translates to: SAFHDMKGCVMKPRLSFLQFGIV*AGFSIK
Trigger: TTTAATGGAGAACCCGGCGCACACGATGCCAAACTG...TAGGAAACTTAAGCGAGGTTTCATGACACAACCTTTCATGTCGTGAAAGGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTCTTAGACACAAGAGCTaGTTCGACAAGGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTLRHKS*FDKALL
Trigger: GAGCAGGGCCTTGTCGAAGCAGCTCTTGTGTCTAAG...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TCTGCCTTTCACGACATGAAAGGTTGTGTCATGAAACCTCGCTTAAGTTTCCTAGATCTGCAGAAACCATaGAAGGCCACCAAGGGTAAC +
Preference number: 4 (lower is better)
Translates to: SAFHDMKGCVMKPRLSFLDLQKP*KATKGN
Trigger: GTTACCCTTGGTGGCCTTGCATGGTTTCTGCAGATC...TAGGAAACTTAAGCGAGGTTTCATGACACAACCTTTCATGTCGTGAAAGGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATGCTCCTCCACTGACATaGTTGCAGCTTCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHAPPLT*LQLLLL
Trigger: AAGCAGAAGAAGCTGCAAGCATGTCAGTGGAGGAGC...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TTTTGCTTTCTCCATAATATAGAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCTCCTCCACTGACATaGTTGCAGCTTCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: FCFLHNIEGAPMRWLTSNAPPLT*LQLLLL
Trigger: AAGCAGAAGAAGCTGCAAGCATGTCAGTGGAGGAGC...ATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTCTATATTATGGAGAAAGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGAAGGGCTCCTCCACTGACATaGTTGCAGCTTCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: RNMMHTMGSMHHLQNVGRAPPLT*LQLLLL
Trigger: AAGCAGAAGAAGCTGCAAGCATGTCAGTGGAGGAGC...CCTTCCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp AGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGAAGGAAGACTCTGCAGCAATaGCAGCCTCCTTGGCTACTT +
Preference number: 4 (lower is better)
Translates to: RNMMHTMGSMHHLQNVGRKTLQQ*QPPWLL
Trigger: AAGTAGCCAAGGAGGCTGGCATTGCTGCAGAGTCTT...CCTTCCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp TCCACTGAGTTATCAACGGGTATTGTAGAGACATTCAAAGTTAGTGTTACTTGCCCTGAAGCATCTGGGTaGTCAGCTACCACCTCATCC +
Preference number: 4 (lower is better)
Translates to: STELSTGIVETFKVSVTCPEASG*SATTSS
Trigger: GGATGAGGTGGTAGCTGAGCACCCAGATGCTTCAGG...GCAAGTAACACTAACTTTGAATGTCTCTACAATACCCGTTGATAACTCAGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CTCCTCATAAACATGACAAAAACAGGACCCATGTCTACAATGAGAAAAACAGCACCTGAAGCATCTGGGTaGTCAGCTACCACCTCATCC +
Preference number: 4 (lower is better)
Translates to: LLINMTKTGPMSTMRKTAPEASG*SATTSS
Trigger: GGATGAGGTGGTAGCTGAGCACCCAGATGCTTCAGG...TGCTGTTTTTCTCATTGTAGACATGGGTCCTGTTTTTGTCATGTTTATGAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATCTCTTCCGAAGACTGTaGTTGTCCGTCCTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHLFRRL*LSVLSL
Trigger: AAGACTCAGGACGGACAAGCACAGTCTTCGGAAGAG...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp ACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCTTCAGTGGTTTACATaGATCAGACAGATTTTTCGT +
Preference number: 4 (lower is better)
Translates to: TSVCVSSALSYGDSEGSSLQWFT*IRQIFR
Trigger: ACGAAAAATCTGTCTGATGCATGTAAACCACTGAAG...AGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR GCA 90 bp AGAGTGGGAGGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGCTTCAGTGGTTTACATaGATCAGACAGATTTTTCGT +
Preference number: 4 (lower is better)
Translates to: RVGGNLDIRRNSSVAVTLLQWFT*IRQIFR
Trigger: ACGAAAAATCTGTCTGATGCATGTAAACCACTGAAG...CAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TGTGTCCTCAGCTTCAGCATCTTCTGTAGGGTCCTGTATCCTCTTTGTGTGGTTTTACATCATTCTAAGTaGAGTACAGAGCAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: CVLSFSIFCRVLYPLCVVLHHSK*STEQLG
Trigger: ACCCAGCTGCTCTGTACTGCACTTAGAATGATGTAA...AACCACACAAAGAGGATACAGGACCCTACAGAAGATGCTGAAGCTGAGGACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR GCA 90 bp CAGGGCCGCATCAGTAAACACACACTTCAGTCGGTGGTGATTTGTGAAATAGGTTTCAGCTTCTTGCAGTaGGTTTTTGAAGACTCTTCC +
Preference number: 4 (lower is better)
Translates to: QGRISKHTLQSVVICEIGFSFLQ*VFEDSS
Trigger: GGAAGAGTCTTCAAAAACGCACTGCAAGAAGCTGAA...ACCTATTTCACAAATCACCACCGACTGAAGTGTGTGTTTACTGATGCGGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TCTTTAGACCCAAAGAAAAACACAGGGAATTCTCCAATCTCGTGCTTCATTTTCCCTTGGTGCAGAACTTaGGGTCACACAGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: SLDPKKNTGNSPISCFIFPWCRT*GHTAPA
Trigger: AGCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGG...GAAAATGAAGCACGAGATTGGAGAATTCCCTGTGTTTTTCTTTGGGTCTAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp GTAGTTCCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTCCCAGCATGAAGTCGAAGGTTTaGCACACACGTCACAATGAT +
Preference number: 4 (lower is better)
Translates to: VVPKFHPNDILEVQLLPSMKSKV*HTRHND
Trigger: ATCATTGTGACGTGTGTGGCAAACCTTCGACTTCAT...GCTGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGGAACTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp CAGGGCCGCATCAGTAAACACACACTTCAGTCGGTGGTGATTTGTGAAATAGGTATGAAGTCGAAGGTTTaGCACACACGTCACAATGAT +
Preference number: 4 (lower is better)
Translates to: QGRISKHTLQSVVICEIGMKSKV*HTRHND
Trigger: ATCATTGTGACGTGTGTGGCAAACCTTCGACTTCAT...ACCTATTTCACAAATCACCACCGACTGAAGTGTGTGTTTACTGATGCGGCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACACAGGTCCAAAGACACTaGAGTTTTTACCAAGGCATA +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTQVQRH*SFYQGI
Trigger: TATGCCTTGGTAAAAACTGCAGTGTCTTTGGACCTG...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TGCTGTTTTGACGTAAGCATTGGTAGTCCCTTACCTGCCGGAAGGGATCTTTTGCTGCAAAGCCGATTCTaGTGTTTTGACGTAAGCATT +
Preference number: 4 (lower is better)
Translates to: CCFDVSIGSPLPAGRDLLLQSRF*CFDVSI
Trigger: AATGCTTACGTCAAAACAGCAGAATCGGCTTTGCAG...CAAAAGATCCCTTCCGGCAGGTAAGGGACTACCAATGCTTACGTCAAAACAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACACTGCAAAGCCGATTCTaGTGTTTTGACGTAAGCATT +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTLQSRF*CFDVSI
Trigger: AATGCTTACGTCAAAACAGCAGAATCGGCTTTGCAG...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TCCACTGAGTTATCAACGGGTATTGTAGAGACATTCAAAGTTAGTGTTACTTGCAAGACAGACAAACACTaGGAAGGGGACCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: STELSTGIVETFKVSVTCKTDKH*EGDPAS
Trigger: GCTGGCTGGGTCCCCTTCGCAGTGTTTGTCTGTCTT...GCAAGTAACACTAACTTTGAATGTCTCTACAATACCCGTTGATAACTCAGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TCTGCCTTTCACGACATGAAAGGTTGTGTCATGAAACCTCGCTTAAGTTTCCTACACAGCCAAAGAATCTaGCGGGAATTAACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: SAFHDMKGCVMKPRLSFLHSQRI*RELTVG
Trigger: GCCCACAGTTAATTCCCGGCAGATTCTTTGGCTGTG...TAGGAAACTTAAGCGAGGTTTCATGACACAACCTTTCATGTCGTGAAAGGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCTATGCCAATGTCATGCTaGTCTTTGGACACCATTTGG +
Preference number: 4 (lower is better)
Translates to: VCTMIRHLQQHPGILHHSMPMSC*SLDTIW
Trigger: CCAAATGGTGTCCAAAGAGCAGCATGACATTGGCAT...AGAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR GCA 90 bp TGCTCTATAGAAGCAACTGATGCAGAGGTTGGTGTACATAACCTGATTACAGTACCTGTCCAAGGACTCTaGACATCACACACAGTCACC +
Preference number: 4 (lower is better)
Translates to: CSIEATDAEVGVHNLITVPVQGL*TSHTVT
Trigger: GGTGACTGTGTGTGATGTGCAGAGTCCTTGGACAGG...TACTGTAATCAGGTTATGTACACCAACCTCTGCATCAGTTGCTTCTATAGAGCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTTTATACTGGCTTCCATaGCGGGACACAGAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTLYWLP*RDTEED
Trigger: GTCCTCCTCTGTGTCCCGGCATGGAAGCCAGTATAA...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGACATCAGAGGAGCCTCTaGTGCCAAGGCAACCCTTTC +
Preference number: 4 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGHQRSL*CQGNPF
Trigger: GAAAGGGTTGCCTTGGCAGCAGAGGCTCCTCTGATG...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTGATTGTGCCACTTACTaGACTCCAGCCTGGCCAACA +
Preference number: 4 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTDCATY*TPAWPT
Trigger: TGTTGGCCAGGCTGGAGTGCAGTAAGTGGCACAATC...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTCTGAGGCAGAAGAATTaGTGGAACCAAGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTLRQKN*WNQGGG
Trigger: TCCGCCTCCTTGGTTCCAGCAATTCTTCTGCCTCAG...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GACCTCTATTGCCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGAGTCCCAAAGGAAGCATaGTCCTTGCTCATCCAGTAT +
Preference number: 4 (lower is better)
Translates to: DLYCQYVHYLKMPPYYNGVPKEA*SLLIQY
Trigger: ATACTGGATGAGCAAGGAGCATGCTTCCTTTGGGAC...TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGACTCCCAGAGCACCACTaGACACCACAGTCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGLPEHH*TPQSSS
Trigger: AGAAGACGACTGTGGTGTGCAGTGGTGCTCTGGGAG...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TCCACTGAGTTATCAACGGGTATTGTAGAGACATTCAAAGTTAGTGTTACTTGCTCCACAGTACTGAGGTaGAGGACACCTGACGTGCAG +
Preference number: 4 (lower is better)
Translates to: STELSTGIVETFKVSVTCSTVLR*RTPDVQ
Trigger: CTGCACGTCAGGTGTCCTCCACCTCAGTACTGTGGA...GCAAGTAACACTAACTTTGAATGTCTCTACAATACCCGTTGATAACTCAGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
CDS-3UTR CCA 90 bp TCAGACTTTTTGGATGAGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGTTTCAGCTTGTCGGCTaGAATAAAGGGCAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: SDFLDETDTSVCVSSALSFQLVG*NKGQGV
Trigger: GACGCCCTGCCCTTTATTCCAGCCGACAAGCTGAAA...CGAAAGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATTTTCAGCTTGTCGGCTaGAATAAAGGGCAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNFQLVG*NKGQGV
Trigger: GACGCCCTGCCCTTTATTCCAGCCGACAAGCTGAAA...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TGCTCTATAGAAGCAACTGATGCAGAGGTTGGTGTACATAACCTGATTACAGTAACTCAAAACGCAGTTTaGCATCGTGTGCGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: CSIEATDAEVGVHNLITVTQNAV*HRVRRV
Trigger: AACCCGGCGCACACGATGCCAAACTGCGTTTTGAGT...TACTGTAATCAGGTTATGTACACCAACCTCTGCATCAGTTGCTTCTATAGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TCCTCGTCGATCAGCTCCCCAACGTACTCGTTAACAAATTCTCCCTTTCTGATGGTCTCTTCCAGTGTTTaGACAAGACTCTTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: SSSISSPTYSLTNSPFLMVSSSV*TRLFLS
Trigger: GCTAAGAAAGAGTCTTGTCCAAACACTGGAAGAGAC...CATCAGAAAGGGAGAATTTGTTAACGAGTACGTTGGGGAGCTGATCGACGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp CGACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATATACGTCTCTTCCAGTGTTTaGACAAGACTCTTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: RPRYTGLMHYSKSKPSIYVSSSV*TRLFLS
Trigger: GCTAAGAAAGAGTCTTGTCCAAACACTGGAAGAGAC...GTATATCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp CCCAATGGGTGTGTGTCAGTGTGGACCTCAAACAGCAATTCTCATGGTCACCTATTGTATTTCAACAGGTaGTCTTTGTCTCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: PNGCVSVWTSNSNSHGHLLYFNR*SLSLPV
Trigger: CACTGGAAGAGACAAAGACCACCTGTTGAAATACAA...TAGGTGACCATGAGAATTGCTGTTTGAGGTCCACACTGACACACACCCATTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420906.6
CDS-3UTR CCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCATATCCAAGCTCTTTCTaGGGCGTCACCAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSYPSSF*GVTKEL
Trigger: CAGTTCTTTGGTGACGCCCCAGAAAGAGCTTGGATA...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATTCCCTTCCTGCTTCGTaGCATGGAGACTGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNSLPAS*HGDCGL
Trigger: AAGACCACAGTCTCCATGCCACGAAGCAGGAAGGGA...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTCCACCAGGGCAAACTTaGTGTTGTAGCGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTPPGQT*CCSVLS
Trigger: AGAGAGCACGCTACAACACCAAGTTTGCCCTGGTGG...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TGTGCACTACCTGAAGATGCCACCCTATTACAATGGAGTACTTACGTTTTTAGAAGGAGGCTGCCTCCATaGCCTTGTAAGAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: CALPEDATLLQWSTYVFRRRLPP*PCKSLF
Trigger: GAACAAGCTCTTACAAGGCCATGGAGGCAGCCTCCT...TCTAAAAACGTAAGTACTCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp ACAAATGTGGACCTAACACGTAACCATGGAGTTCAAAGGTATCCAACCAAAAAGTTTTTCGTTGCTGCCTaGCTCTTGAGCGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: TNVDLTRNHGVQRYPTKKFFVAA*LLSEEA
Trigger: AGCCTCCTCGCTCAAGAGCCAGGCAGCAACGAAAAA...CTTTTTGGTTGGATACCTTTGAACTCCATGGTTACGTGTTAGGTCCACATTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GAAAAACACAGGGAATTCTCCAATCTCGTGCTTCATTTTCTGAATATTTGGGGGTTTTTCGTTGCTGCCTaGCTCTTGAGCGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: EKHREFSNLVLHFLNIWGFFVAA*LLSEEA
Trigger: AGCCTCCTCGCTCAAGAGCCAGGCAGCAACGAAAAA...CCCCCAAATATTCAGAAAATGAAGCACGAGATTGGAGAATTCCCTGTGTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp GACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACACATTTCAGAGGAGAATTTCGCTTCTTCAGTaGTTTACATGCATCAGACAG +
Preference number: 4 (lower is better)
Translates to: DEFLATLGKSLRYTFQRRISLLQ*FTCIRQ
Trigger: CTGTCTGATGCATGTAAACCACTGAAGAAGCGAAAT...TCTCCTCTGAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp CCCAATGGGTGTGTGTCAGTGTGGACCTCAAACAGCAATTCTCATGGTCACCTAATTTCGCTTCTTCAGTaGTTTACATGCATCAGACAG +
Preference number: 4 (lower is better)
Translates to: PNGCVSVWTSNSNSHGHLISLLQ*FTCIRQ
Trigger: CTGTCTGATGCATGTAAACCACTGAAGAAGCGAAAT...TAGGTGACCATGAGAATTGCTGTTTGAGGTCCACACTGACACACACCCATTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420906.6
CDS-3UTR CCA 90 bp TCCACTGAGTTATCAACGGGTATTGTAGAGACATTCAAAGTTAGTGTTACTTGCGGAATCCACTGCAATTaGAGGCTCCACACCGGCAGA +
Preference number: 4 (lower is better)
Translates to: STELSTGIVETFKVSVTCGIHCN*RLHTGR
Trigger: TCTGCCGGTGTGGAGCCTCCAATTGCAGTGGATTCC...GCAAGTAACACTAACTTTGAATGTCTCTACAATACCCGTTGATAACTCAGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AAACAGTCATCAACTACACTCATAGGATCAAGATATTTGGCAACTGACAGTCATGCGCGAGCAAGTCAGTaGCTACACAGCTCGTTTCCC +
Preference number: 4 (lower is better)
Translates to: KQSSTTLIGSRYLATDSHARASQ*LHSSFP
Trigger: GGGAAACGAGCTGTGTAGCCACTGACTTGCTCGCGC...ATGACTGTCAGTTGCCAAATATCTTGATCCTATGAGTGTAGTTGATGACTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AGAGTGGGAGGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGTTTCTTAGGACACTTTaGGAGAAGTTAGAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: RVGGNLDIRRNSSVAVTLFLRTL*EKLESE
Trigger: TTCAGACTCTAACTTCTCCCAAAGTGTCCTAAGAAA...CAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp ACAAATGTGGACCTAACACGTAACCATGGAGTTCAAAGGTATCCAACCAAAAAGTGCATCTATCAGTTATaGGCTAGCTGGCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: TNVDLTRNHGVQRYPTKKCIYQL*ASWLAT
Trigger: GGTGGCCAGCCAGCTAGCCCATAACTGATAGATGCA...CTTTTTGGTTGGATACCTTTGAACTCCATGGTTACGTGTTAGGTCCACATTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp ATCCTGCAACATTTGAGCAGAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATTACTATATGCCTGGATaGTCAGCATGCTTCAAAATA +
Preference number: 4 (lower is better)
Translates to: ILQHLSRANRGTQPALSHYYMPG*SACFKI
Trigger: TATTTTGAAGCATGCTGACCATCCAGGCATATAGTA...ATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTCTGCTCAAATGTTGCAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGAAACTAGAAACTTCCTaGCTATCCCTAAATTCTAGG +
Preference number: 4 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKKLETS*LSLNSR
Trigger: CCTAGAATTTAGGGATAGCCAGGAAGTTTCTAGTTT...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGAAGGCGACCACCACTGAGTTaGTTTGAGTCCCTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: RNMMHTMGSMHHLQNVGRRPPLS*FESLQK
Trigger: TTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCG...CCTTCCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp TCCACTGAGTTATCAACGGGTATTGTAGAGACATTCAAAGTTAGTGTTACTTGCGACTCCACTGTGACCTaGGCAGCTCTTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: STELSTGIVETFKVSVTCDSTVT*AALQSP
Trigger: AGGAGATTGAAGAGCTGCTCAGGTCACAGTGGAGTC...GCAAGTAACACTAACTTTGAATGTCTCTACAATACCCGTTGATAACTCAGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAGACTCCACTGTGACCTaGGCAGCTCTTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGDSTVT*AALQSP
Trigger: AGGAGATTGAAGAGCTGCTCAGGTCACAGTGGAGTC...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGAGCTAAACCCAAGAGCTaGAGATGCTGCCGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: FLKILYAWMVSMLQNITRAKPKS*RCCRGS
Trigger: GCTTCCACGGCAGCATCTTCAGCTCTTGGGTTTAGC...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCAGCTAAACCCAAGAGCTaGAGATGCTGCCGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSAKPKS*RCCRGS
Trigger: GCTTCCACGGCAGCATCTTCAGCTCTTGGGTTTAGC...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GAAAAACACAGGGAATTCTCCAATCTCGTGCTTCATTTTCTGAATATTTGGGGGCAAATTCTCCCTTTCTaGTGTCCCTCTTGGCGACCA +
Preference number: 4 (lower is better)
Translates to: EKHREFSNLVLHFLNIWGQILPF*CPSWRP
Trigger: TGGTCGCCAAGAGGGACATCAGAAAGGGAGAATTTG...CCCCCAAATATTCAGAAAATGAAGCACGAGATTGGAGAATTCCCTGTGTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATGCAGAGGTGGCAAAATaGAGTCGAAGGTTTGCCACA +
Preference number: 4 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNAEVAK*SRRFAT
Trigger: TGTGGCAAACCTTCGACTTCATTTTGCCACCTCTGC...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp AAACAGTCATCAACTACACTCATAGGATCAAGATATTTGGCAACTGACAGTCATGGCAGAGGGCACATGTaGTCAGCAGAGACTGCATCT +
Preference number: 4 (lower is better)
Translates to: KQSSTTLIGSRYLATDSHGRGHM*SAETAS
Trigger: AGATGCAGTCTCTGCTGATCACATGTGCCCTCTGCC...ATGACTGTCAGTTGCCAAATATCTTGATCCTATGAGTGTAGTTGATGACTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CAGGGCCGCATCAGTAAACACACACTTCAGTCGGTGGTGATTTGTGAAATAGGTAGGAGCATAAATCTATaGGCCGATCCAGTATTTTCT +
Preference number: 4 (lower is better)
Translates to: QGRISKHTLQSVVICEIGRSINL*ADPVFS
Trigger: AGAAAATACTGGATCGGCTCATAGATTTATGCTCCT...ACCTATTTCACAAATCACCACCGACTGAAGTGTGTGTTTACTGATGCGGCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CGCTCAGACTTTTTGGATGAGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTAAAGCCTGGCTCCACTaGGTTATCAACGGGTATTGT +
Preference number: 4 (lower is better)
Translates to: RSDFLDETDTSVCVSSALKAWLH*VINGYC
Trigger: ACAATACCCGTTGATAACTCAGTGGAGCCAGGCTTT...AAGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGAGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR TCA 90 bp TTTTGCTTTCTCCATAATATAGAGGGAGCACCTATGCGCTGGCTGACTTCTAATCACCTTCTGCTTTTATaGGCTGAAGGGCAAGTAAGC +
Preference number: 4 (lower is better)
Translates to: FCFLHNIEGAPMRWLTSNHLLLL*AEGQVS
Trigger: GCTTACTTGCCCTTCAGCTCATAAAAGCAGAAGGTG...ATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTCTATATTATGGAGAAAGCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GACCTCTATTGCCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGATTTTTGCATGAACACTaGGGAAAGGCCCAAAGATCC +
Preference number: 4 (lower is better)
Translates to: DLYCQYVHYLKMPPYYNGFLHEH*GKAQRS
Trigger: GGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAA...TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGACAGCAAGCTTGCTCCTaGCAGCATGGCTCTCACACA +
Preference number: 4 (lower is better)
Translates to: FLKILYAWMVSMLQNITRQQACS*QHGSHT
Trigger: TGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTG...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp AATTTTTGCATGAACACTGAGGAAAGGCCCAAAGATCCATCTAGAGCAGGTGGGGGAATGCAGTCTCCTTaGTCTATTACAGGGACTTTT +
Preference number: 4 (lower is better)
Translates to: NFCMNTEERPKDPSRAGGGMQSP*SITGTF
Trigger: AAAAGTCCCTGTAATAGATCAAGGAGACTGCATTCC...CCCACCTGCTCTAGATGGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGAGAAAAGTGCAGGGACTaGGCGGACACAGACTCTGTC +
Preference number: 4 (lower is better)
Translates to: FLKILYAWMVSMLQNITREKCRD*ADTDSV
Trigger: GACAGAGTCTGTGTCCGCTCAGTCCCTGCACTTTTC...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GGACTTTTCAAGATGATATTACCAAACATAACGGAACCTAGTGAACACATTCCAGGTCATGGATGCTGCTaGATCTCCTGCAACGCACAG +
Preference number: 4 (lower is better)
Translates to: GLFKMILPNITEPSEHIPGHGCC*ISCNAQ
Trigger: CTGTGCGTTGCAGGAGATGCAGCAGCATCCATGACC...TGGAATGTGTTCACTAGGTTCCGTTATGTTTGGTAATATCATCTTGAAAAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503128.5
CDS-3UTR GCA 90 bp GACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACACATTTCAGAGGAGACCTGCTTCATCTTTATaGACTTTACAACACTCTGAA +
Preference number: 4 (lower is better)
Translates to: DEFLATLGKSLRYTFQRRPASSL*TLQHSE
Trigger: TTCAGAGTGTTGTAAAGTGCATAAAGATGAAGCAGG...TCTCCTCTGAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCATCTATCAGTTATGGGCTACCTGCTTCATCTTTATaGACTTTACAACACTCTGAA +
Preference number: 4 (lower is better)
Translates to: EGAPMRWLTSNASISYGLPASSL*TLQHSE
Trigger: TTCAGAGTGTTGTAAAGTGCATAAAGATGAAGCAGG...TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGCCTGCTTCATCTTTATaGACTTTACAACACTCTGAA +
Preference number: 4 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLPASSL*TLQHSE
Trigger: TTCAGAGTGTTGTAAAGTGCATAAAGATGAAGCAGG...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TTTTGCTTTCTCCATAATATAGAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCCGAGGATTTCTGGTaGCTGCTTCATCTTTATGCA +
Preference number: 4 (lower is better)
Translates to: FCFLHNIEGAPMRWLTSNAEDFW*LLHLYA
Trigger: TGCATAAAGATGAAGCAGGCACCAGAAATCCTCGGC...ATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTCTATATTATGGAGAAAGCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TGTGCACTACCTGAAGATGCCACCCTATTACAATGGAGTACTTACGTTTTTAGACAGTTTGGCATCGTGTaGGCCGGGTTCTCCATTAAA +
Preference number: 4 (lower is better)
Translates to: CALPEDATLLQWSTYVFRQFGIV*AGFSIK
Trigger: TTTAATGGAGAACCCGGCGCACACGATGCCAAACTG...TCTAAAAACGTAAGTACTCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp CTCCTCATAAACATGACAAAAACAGGACCCATGTCTACAATGAGAAAAACAGCACTTAGACACAAGAGCTaGTTCGACAAGGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LLINMTKTGPMSTMRKTALRHKS*FDKALL
Trigger: GAGCAGGGCCTTGTCGAAGCAGCTCTTGTGTCTAAG...TGCTGTTTTTCTCATTGTAGACATGGGTCCTGTTTTTGTCATGTTTATGAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp ACAAATGTGGACCTAACACGTAACCATGGAGTTCAAAGGTATCCAACCAAAAAGGATCTGCAGAAACCATaGAAGGCCACCAAGGGTAAC +
Preference number: 4 (lower is better)
Translates to: TNVDLTRNHGVQRYPTKKDLQKP*KATKGN
Trigger: GTTACCCTTGGTGGCCTTGCATGGTTTCTGCAGATC...CTTTTTGGTTGGATACCTTTGAACTCCATGGTTACGTGTTAGGTCCACATTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AGTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCTACGTGATACTGGCGTaGACTCTTTTTCTGACCTTT +
Preference number: 4 (lower is better)
Translates to: SVYDDTPPAAASWNITSFYVILA*TLFLTF
Trigger: AAAGGTCAGAAAAAGAGTGCACGCCAGTATCACGTA...GAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420906.6
CDS-3UTR GCA 90 bp ACAAATGTGGACCTAACACGTAACCATGGAGTTCAAAGGTATCCAACCAAAAAGAAGACTCTGCAGCAATaGCAGCCTCCTTGGCTACTT +
Preference number: 4 (lower is better)
Translates to: TNVDLTRNHGVQRYPTKKKTLQQ*QPPWLL
Trigger: AAGTAGCCAAGGAGGCTGGCATTGCTGCAGAGTCTT...CTTTTTGGTTGGATACCTTTGAACTCCATGGTTACGTGTTAGGTCCACATTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATATACATTCTCTTCATGGGAATaGACTCTTCTCTCACAGACT +
Preference number: 4 (lower is better)
Translates to: DPATLASCITLNQSLRYTFSSWE*TLLSQT
Trigger: AGTCTGTGAGAGAAGAGTGCATTCCCATGAAGAGAA...TGTATATCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp TATTACATCATTCTAAGTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACGACCAAAAACTGGGATaGTGCATCTCCCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: YYIILSAVQSSWVQIQLDDQKLG*CISLPA
Trigger: AGCAGGAAGGGAGATGCAGCATCCCAGTTTTTGGTC...GTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCACTTAGAATGATGTAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000678714.1
CDS-3UTR GCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAACCTGAAGCATCTGGGTaGTCAGCTACCACCTCATCC +
Preference number: 4 (lower is better)
Translates to: STTSTIYSISNEMHLERKPEASG*SATTSS
Trigger: GGATGAGGTGGTAGCTGAGCACCCAGATGCTTCAGG...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCCCTGAAGCATCTGGGTaGTCAGCTACCACCTCATCC +
Preference number: 4 (lower is better)
Translates to: TGNSNVLRLECITIILRFPEASG*SATTSS
Trigger: GGATGAGGTGGTAGCTGAGCACCCAGATGCTTCAGG...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ACAAATGTGGACCTAACACGTAACCATGGAGTTCAAAGGTATCCAACCAAAAAGCTCTTCCGAAGACTGTaGTTGTCCGTCCTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: TNVDLTRNHGVQRYPTKKLFRRL*LSVLSL
Trigger: AAGACTCAGGACGGACAAGCACAGTCTTCGGAAGAG...CTTTTTGGTTGGATACCTTTGAACTCCATGGTTACGTGTTAGGTCCACATTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AAACAGTCATCAACTACACTCATAGGATCAAGATATTTGGCAACTGACAGTCATCTTGAGCGAGGAGGCTaGCTCCATGGCCTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: KQSSTTLIGSRYLATDSHLERGG*LHGLVR
Trigger: TCTTACAAGGCCATGGAGGCAGCCTCCTCGCTCAAG...ATGACTGTCAGTTGCCAAATATCTTGATCCTATGAGTGTAGTTGATGACTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATATGATATCCTGGAAGTaGAGCTTCTTCCCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNMISWK*SFFPAL
Trigger: CAGGGCTGGGAAGAAGCTGCACTTCCAGGATATCAT...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATGTGATCAGCAGAGACTaGATCTTCCATCACCAGACC +
Preference number: 4 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNVISRD*IFHHQT
Trigger: GGTCTGGTGATGGAAGATGCAGTCTCTGCTGATCAC...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATGGGTATGGGTTTAGGTaGAGATGCTGGTTTCGGATG +
Preference number: 4 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNGYGFR*RCWFRM
Trigger: CATCCGAAACCAGCATCTGCACCTAAACCCATACCC...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGACTTACCATGCAAAAATaGGGACACCTGGGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGLTMQK*GHLGQD
Trigger: GTCCTGCCCCAGGTGTCCGCATTTTTGCATGGTAAG...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TGCTCTATAGAAGCAACTGATGCAGAGGTTGGTGTACATAACCTGATTACAGTACACAGCCAAAGAATCTaGCGGGAATTAACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: CSIEATDAEVGVHNLITVHSQRI*RELTVG
Trigger: GCCCACAGTTAATTCCCGGCAGATTCTTTGGCTGTG...TACTGTAATCAGGTTATGTACACCAACCTCTGCATCAGTTGCTTCTATAGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ACAAATGTGGACCTAACACGTAACCATGGAGTTCAAAGGTATCCAACCAAAAAGGACTGTCCCTCTCACTaGAGAGTGCTGAGTTCACTT +
Preference number: 4 (lower is better)
Translates to: TNVDLTRNHGVQRYPTKKDCPSH*RVLSSL
Trigger: AAGTGAACTCAGCACTCTGCAGTGAGAGGGACAGTC...CTTTTTGGTTGGATACCTTTGAACTCCATGGTTACGTGTTAGGTCCACATTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAAGAAGTGGGACAATGCTaGCACACATGGGACTGTCCC +
Preference number: 4 (lower is better)
Translates to: STTSTIYSISNEMHLERKEVGQC*HTWDCP
Trigger: GGGACAGTCCCATGTGTGGCAGCATTGTCCCACTTC...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TGCTCTATAGAAGCAACTGATGCAGAGGTTGGTGTACATAACCTGATTACAGTATCCTTTCCTGTGGTGTaGTCAGCTCTTAACGTCTCC +
Preference number: 4 (lower is better)
Translates to: CSIEATDAEVGVHNLITVSFPVV*SALNVS
Trigger: GGAGACGTTAAGAGCTGAGCACACCACAGGAAAGGA...TACTGTAATCAGGTTATGTACACCAACCTCTGCATCAGTTGCTTCTATAGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCACAGAGGAGCCTCTGCTaGCAAGGCAACCCTTTCAAC +
Preference number: 4 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSQRSLC*QGNPFN
Trigger: GTTGAAAGGGTTGCCTTGGCAGCAGAGGCTCCTCTG...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TCTGCCTTTCACGACATGAAAGGTTGTGTCATGAAACCTCGCTTAAGTTTCCTAGTTGGAGAGACACCCTaGTGTAAGAATGTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: SAFHDMKGCVMKPRLSFLVGETP*CKNVPK
Trigger: CTTTGGGACATTCTTACAGCAGGGTGTCTCTCCAAC...TAGGAAACTTAAGCGAGGTTTCATGACACAACCTTTCATGTCGTGAAAGGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AGTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCGTCCATGACACAGATTaGAGAGATTCCGACTTTTTC +
Preference number: 4 (lower is better)
Translates to: SVYDDTPPAAASWNITSFVHDTD*RDSDFF
Trigger: GAAAAAGTCGGAATCTCTGCAATCTGTGTCATGGAC...GAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR GCA 90 bp TATTACATCATTCTAAGTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACGTTGGTTTGAGTCCCTaGAGAAAATCCCACTCGGAG +
Preference number: 4 (lower is better)
Translates to: YYIILSAVQSSWVQIQLDVGLSP*RKSHSE
Trigger: CTCCGAGTGGGATTTTCTGCAGGGACTCAAACCAAC...GTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCACTTAGAATGATGTAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420906.6
CDS-3UTR GCA 90 bp AATTATCTACACGTATCAAACTGTAAAGCAGCCCCAGTCCCACCATCCGTGAACGCTACACTGGCCTCATaGATTACTCTAAATCAAAGC +
Preference number: 4 (lower is better)
Translates to: NYLHVSNCKAAPVPPSVNATLAS*ITLNQS
Trigger: GCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGC...GTTCACGGATGGTGGGACTGGGGCTGCTTTACAGTTTGATACGTGTAGATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp CATATAAGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTATCGGAGTCTTCCCGTTaGCACTGCCGAGGATTTCTG +
Preference number: 4 (lower is better)
Translates to: HIRNMMHTMGSMHHLQNVSESSR*HCRGFL
Trigger: CAGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGA...TACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCTTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATTATCCAAGCTCTTTCTaGGGCGTCACCAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHYPSSF*GVTKEL
Trigger: CAGTTCTTTGGTGACGCCCCAGAAAGAGCTTGGATA...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TCTTTAGACCCAAAGAAAAACACAGGGAATTCTCCAATCTCGTGCTTCATTTTCCAGAGCTACACAGTTTaGCCCTCCGCCTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: SLDPKKNTGNSPISCFIFQSYTV*PSAFSS
Trigger: TGAAGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTG...GAAAATGAAGCACGAGATTGGAGAATTCCCTGTGTTTTTCTTTGGGTCTAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp CTCCTCATAAACATGACAAAAACAGGACCCATGTCTACAATGAGAAAAACAGCATCCCTTCCTGCTTCGTaGCATGGAGACTGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: LLINMTKTGPMSTMRKTASLPAS*HGDCGL
Trigger: AAGACCACAGTCTCCATGCCACGAAGCAGGAAGGGA...TGCTGTTTTTCTCATTGTAGACATGGGTCCTGTTTTTGTCATGTTTATGAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp TATAAGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGTTTTTCGTTGCTGCCTaGCTCTTGAGCGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: YKEHDAHYGIYASPSKCRFFVAA*LLSEEA
Trigger: AGCCTCCTCGCTCAAGAGCCAGGCAGCAACGAAAAA...CCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCTTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp AAACAGTCATCAACTACACTCATAGGATCAAGATATTTGGCAACTGACAGTCATGAAGGGTTGGAAGCATaGCAGCTCACACAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: KQSSTTLIGSRYLATDSHEGLEA*QLTQLW
Trigger: CCACAGCTGTGTGAGCTGCCATGCTTCCAACCCTTC...ATGACTGTCAGTTGCCAAATATCTTGATCCTATGAGTGTAGTTGATGACTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TCCACTGAGTTATCAACGGGTATTGTAGAGACATTCAAAGTTAGTGTTACTTGCTTCCGAGCAGTGAAGTaGGCAGTGCAGATGATGCTG +
Preference number: 4 (lower is better)
Translates to: STELSTGIVETFKVSVTCFRAVK*AVQMML
Trigger: CAGCATCATCTGCACTGCCCACTTCACTGCTCGGAA...GCAAGTAACACTAACTTTGAATGTCTCTACAATACCCGTTGATAACTCAGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TGTGCACTACCTGAAGATGCCACCCTATTACAATGGAGTACTTACGTTTTTAGACTTGGTCCGGGGCCTTaGATCAAAAGGGTTAAATGG +
Preference number: 4 (lower is better)
Translates to: CALPEDATLLQWSTYVFRLGPGP*IKRVKW
Trigger: CCATTTAACCCTTTTGATCCAAGGCCCCGGACCAAG...TCTAAAAACGTAAGTACTCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TGTGCACTACCTGAAGATGCCACCCTATTACAATGGAGTACTTACGTTTTTAGAATTACAGTATCCCCTTaGTCCGGGGCCTTGGATCAA +
Preference number: 4 (lower is better)
Translates to: CALPEDATLLQWSTYVFRITVSP*SGALDQ
Trigger: TTGATCCAAGGCCCCGGACCAAGGGGATACTGTAAT...TCTAAAAACGTAAGTACTCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTGGAGCACCTATGCGCTaGCTGACTTCTAATGCATCT +
Preference number: 4 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTGAPMR*LTSNAS
Trigger: AGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCC...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TTTTGCTTTCTCCATAATATAGAGGGAGCACCTATGCGCTGGCTGACTTCTAATTGGAAATGCTTATACTaGCTTCCATGCCGGGACACA +
Preference number: 4 (lower is better)
Translates to: FCFLHNIEGAPMRWLTSNWKCLY*LPCRDT
Trigger: TGTGTCCCGGCATGGAAGCCAGTATAAGCATTTCCA...ATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTCTATATTATGGAGAAAGCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp CTCCTCATAAACATGACAAAAACAGGACCCATGTCTACAATGAGAAAAACAGCACTGACCTTCCTGCACTaGAAGGCCTACACTCCTCTA +
Preference number: 4 (lower is better)
Translates to: LLINMTKTGPMSTMRKTALTFLH*KAYTPL
Trigger: TAGAGGAGTGTAGGCCTTCCAGTGCAGGAAGGTCAG...TGCTGTTTTTCTCATTGTAGACATGGGTCCTGTTTTTGTCATGTTTATGAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp CTCCTCATAAACATGACAAAAACAGGACCCATGTCTACAATGAGAAAAACAGCAGCTGAGGATTCAGAGTaGCAAGCCGCAGAGCTCTAT +
Preference number: 4 (lower is better)
Translates to: LLINMTKTGPMSTMRKTAAEDSE*QAAELY
Trigger: ATAGAGCTCTGCGGCTTGCCACTCTGAATCCTCAGC...TGCTGTTTTTCTCATTGTAGACATGGGTCCTGTTTTTGTCATGTTTATGAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
3UTR CAA 72 bp AGCTTTTTCATGTCCTTTGGAGTAACACAGCTTAGATaGCTCCTAGACCATCTTTGGGGCTATGTATCCTGC +
Preference number: 4 (lower is better)
Translates to: SFFMSFGVTQLR*LLDHLWGYVSC
Trigger: GCAGGATACATAGCCCCAAAGATGGTCTAGGAGCAATCTAAGCTGTGTTACTCCAAAGGACATGAAAAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR CAA 72 bp CTGGTTATTCAGCTGATGCCAATGTCATGCTGCTCTTaGGACACCATTTGGTCATTTGCAGGGTTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: LVIQLMPMSCCS*DTIWSFAGFCF
Trigger: AAAGCAAAACCCTGCAAATGACCAAATGGTGTCCAAAGAGCAGCATGACATTGGCATCAGCTGAATAACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR CAA 72 bp ACCAAAGCCATGAAATGCATGAGAACAAAGAAATCTTaGGCTTCCTCCATGAGCCTAGGTCTGGAAGCAACA +
Preference number: 4 (lower is better)
Translates to: TKAMKCMRTKKS*ASSMSLGLEAT
Trigger: TGTTGCTTCCAGACCTAGGCTCATGGAGGAAGCCAAAGATTTCTTTGTTCTCATGCATTTCATGGCTTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATCACTTTACAACACTCTaGACAGAAAGGGGACTCTGC +
Preference number: 4 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNHFTTL*TERGLC
Trigger: GCAGAGTCCCCTTTCTGTTCAGAGTGTTGTAAAGTG...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp TCTTTAGACCCAAAGAAAAACACAGGGAATTCTCCAATCTCGTGCTTCATTTTCCCACATAGAGAAAGGTaGACTTGGCTTTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: SLDPKKNTGNSPISCFIFPHRER*TWLSAP
Trigger: AGGAGCGGAAAGCCAAGTTCACCTTTCTCTATGTGG...GAAAATGAAGCACGAGATTGGAGAATTCCCTGTGTTTTTCTTTGGGTCTAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCACAGCAGCTTCTTCACTaGCTCCTGAGGATTCTGCCA +
Preference number: 4 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSQQLLH*LLRILP
Trigger: TGGCAGAATCCTCAGGAGTCAGTGAAGAAGCTGCTG...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GGACTTTTCAAGATGATATTACCAAACATAACGGAACCTAGTGAACACATTCCACAGCAGCTTCTTCACTaGCTCCTGAGGATTCTGCCA +
Preference number: 4 (lower is better)
Translates to: GLFKMILPNITEPSEHIPQQLLH*LLRILP
Trigger: TGGCAGAATCCTCAGGAGTCAGTGAAGAAGCTGCTG...TGGAATGTGTTCACTAGGTTCCGTTATGTTTGGTAATATCATCTTGAAAAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp CATATAAGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTACAGCAGCTTCTTCACTaGCTCCTGAGGATTCTGCCA +
Preference number: 4 (lower is better)
Translates to: HIRNMMHTMGSMHHLQNVQQLLH*LLRILP
Trigger: TGGCAGAATCCTCAGGAGTCAGTGAAGAAGCTGCTG...TACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCTTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR TCA 90 bp AAACAGTCATCAACTACACTCATAGGATCAAGATATTTGGCAACTGACAGTCATTTCAATCTCCTCACCTaGAGCATCTGGGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: KQSSTTLIGSRYLATDSHFNLLT*SIWVLS
Trigger: GCTGAGCACCCAGATGCTTCAGGTGAGGAGATTGAA...ATGACTGTCAGTTGCCAAATATCTTGATCCTATGAGTGTAGTTGATGACTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCATTCAATCTCCTCACCTaGAGCATCTGGGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSFNLLT*SIWVLS
Trigger: GCTGAGCACCCAGATGCTTCAGGTGAGGAGATTGAA...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp CATATAAGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGACTCCACTGTGACCTaGGCAGCTCTTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: HIRNMMHTMGSMHHLQNVDSTVT*AALQSP
Trigger: AGGAGATTGAAGAGCTGCTCAGGTCACAGTGGAGTC...TACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCTTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR TCA 90 bp CATATAAGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTACAGCAGACTCCACTGTaGCCTGAGCAGCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: HIRNMMHTMGSMHHLQNVQQTPL*PEQLFN
Trigger: ATTGAAGAGCTGCTCAGGTCACAGTGGAGTCTGCTG...TACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCTTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR TCA 90 bp TGCTCTATAGAAGCAACTGATGCAGAGGTTGGTGTACATAACCTGATTACAGTATGGCCGTTTTGTCAGTaGTTGTGTCTCTCTTCCGAA +
Preference number: 4 (lower is better)
Translates to: CSIEATDAEVGVHNLITVWPFCQ*LCLSSE
Trigger: TTCGGAAGAGAGACACAATCACTGACAAAACGGCCA...TACTGTAATCAGGTTATGTACACCAACCTCTGCATCAGTTGCTTCTATAGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp AAACAGTCATCAACTACACTCATAGGATCAAGATATTTGGCAACTGACAGTCATCACACGAAACATGAGTaGATCCCTGAGGCACACTCG +
Preference number: 4 (lower is better)
Translates to: KQSSTTLIGSRYLATDSHHTKHE*IPEAHS
Trigger: CGAGTGTGCCTCAGGGATTCACTCATGTTTCGTGTG...ATGACTGTCAGTTGCCAAATATCTTGATCCTATGAGTGTAGTTGATGACTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATAAGGCTTATTCACCTTaGTGTGCTTGTATGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNKAYSP*CACMVG
Trigger: CCCCACCATACAAGCACATCAAGGTGAATAAGCCTT...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp TTGGATGAGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACGCACTTAGGGATTTCTaGAATATCCGCTGTGTAGAT +
Preference number: 4 (lower is better)
Translates to: LDETDTSVCVSSALSYGDALRDF*NIRCVD
Trigger: ATCTACACAGCGGATATTTCAGAAATCCCTAAGTGC...GTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR TCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACAGAAAAGAAGCGTTTCTaGGGAACAATTCACATTAGT +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTEKKRF*GTIHIS
Trigger: ACTAATGTGAATTGTTCCTCAGAAACGCTTCTTTTC...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp CAGGGCCGCATCAGTAAACACACACTTCAGTCGGTGGTGATTTGTGAAATAGGTGTCGGTGGTGATTTGTaGAATAGGTTTAGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: QGRISKHTLQSVVICEIGVGGDL*NRFSKN
Trigger: ATTTTTGCTAAACCTATTTCACAAATCACCACCGAC...ACCTATTTCACAAATCACCACCGACTGAAGTGTGTGTTTACTGATGCGGCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACAGTCGGTGGTGATTTGTaGAATAGGTTTAGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTVGGDL*NRFSKN
Trigger: ATTTTTGCTAAACCTATTTCACAAATCACCACCGAC...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TGTGCACTACCTGAAGATGCCACCCTATTACAATGGAGTACTTACGTTTTTAGAACTCGCATGGTACTGTaGATAGCACACCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: CALPEDATLLQWSTYVFRTRMVL*IAHLLL
Trigger: AAGCAGAAGGTGTGCTATTCACAGTACCATGCGAGT...TCTAAAAACGTAAGTACTCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TTTTGCTTTCTCCATAATATAGAGGGAGCACCTATGCGCTGGCTGACTTCTAATAGATATATAAAGGCTTaGTGGCCCAATGGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: FCFLHNIEGAPMRWLTSNRYIKA*WPNGSQ
Trigger: CTGAGAGCCATTGGGCCATCAAGCCTTTATATATCT...ATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTCTATATTATGGAGAAAGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TCTGCCTTTCACGACATGAAAGGTTGTGTCATGAAACCTCGCTTAAGTTTCCTATTTTTGCATGAACACTaGGGAAAGGCCCAAAGATCC +
Preference number: 4 (lower is better)
Translates to: SAFHDMKGCVMKPRLSFLFLHEH*GKAQRS
Trigger: GGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAA...TAGGAAACTTAAGCGAGGTTTCATGACACAACCTTTCATGTCGTGAAAGGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp AATTTTTGCATGAACACTGAGGAAAGGCCCAAAGATCCATCTAGAGCAGGTGGGCATTTAATTTTTGCATaGACACTGAGGAAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: NFCMNTEERPKDPSRAGGHLIFA*TLRKGP
Trigger: TGGGCCTTTCCTCAGTGTTCATGCAAAAATTAAATG...CCCACCTGCTCTAGATGGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATATACATCTCTCTACTGTACCTaGCAACAGTATAAGCAACAA +
Preference number: 4 (lower is better)
Translates to: DPATLASCITLNQSLRYTSLYCT*QQYKQQ
Trigger: TTGTTGCTTATACTGTTGTCAGGTACAGTAGAGAGA...TGTATATCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp CCATCTGTAGTTCCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTACAGAAAGGGGACTCTaGTTGATGCTAAATTCCATC +
Preference number: 4 (lower is better)
Translates to: PSVVPKFHPNDILEVQLLTERGL*LMLNSI
Trigger: GATGGAATTTAGCATCAAGCAGAGTCCCCTTTCTGT...AAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGGAACTACAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCGCTTCGACAAGGCCCTaGTCCAGCAAGGAGTCATAT +
Preference number: 4 (lower is better)
Translates to: TGNSNVLRLECITIILRFASTRP*SSKESY
Trigger: ATATGACTCCTTGCTGGAGCAGGGCCTTGTCGAAGC...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AAACAGTCATCAACTACACTCATAGGATCAAGATATTTGGCAACTGACAGTCATCTTAGACACAAGAGCTaGTTCGACAAGGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: KQSSTTLIGSRYLATDSHLRHKS*FDKALL
Trigger: GAGCAGGGCCTTGTCGAAGCAGCTCTTGTGTCTAAG...ATGACTGTCAGTTGCCAAATATCTTGATCCTATGAGTGTAGTTGATGACTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GGACTTTTCAAGATGATATTACCAAACATAACGGAACCTAGTGAACACATTCCACTTAGACACAAGAGCTaGTTCGACAAGGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: GLFKMILPNITEPSEHIPLRHKS*FDKALL
Trigger: GAGCAGGGCCTTGTCGAAGCAGCTCTTGTGTCTAAG...TGGAATGTGTTCACTAGGTTCCGTTATGTTTGGTAATATCATCTTGAAAAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCCTTAGACACAAGAGCTaGTTCGACAAGGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: TGNSNVLRLECITIILRFLRHKS*FDKALL
Trigger: GAGCAGGGCCTTGTCGAAGCAGCTCTTGTGTCTAAG...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TATAAGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGTTCTCCCAAAGACTCTaGAGCAATGCCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: YKEHDAHYGIYASPSKCRFSQRL*SNASLL
Trigger: AAGGAGGCTGGCATTGCTGCAGAGTCTTTGGGAGAA...CCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp GGACTTTTCAAGATGATATTACCAAACATAACGGAACCTAGTGAACACATTCCAACTCTCCAGGGTCTCTaGAGAGCTACACAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: GLFKMILPNITEPSEHIPTLQGL*RATQFG
Trigger: GCCAAACTGTGTAGCTCTGCAGAGACCCTGGAGAGT...TGGAATGTGTTCACTAGGTTCCGTTATGTTTGGTAATATCATCTTGAAAAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp CATATAAGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAACTCTCCAGGGTCTCTaGAGAGCTACACAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: HIRNMMHTMGSMHHLQNVTLQGL*RATQFG
Trigger: GCCAAACTGTGTAGCTCTGCAGAGACCCTGGAGAGT...TACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCTTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAATCTGGGGTCAGCCTCTaGCGTCTTTTGAGGAGTACT +
Preference number: 4 (lower is better)
Translates to: STTSTIYSISNEMHLERKSGVSL*RLLRST
Trigger: AGTACTCCTCAAAAGACGGCAGAGGCTGACCCCAGA...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GACCTCTATTGCCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGATTACATCATTCTAAGTaGAGTACAGAGCAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: DLYCQYVHYLKMPPYYNGLHHSK*STEQLG
Trigger: ACCCAGCTGCTCTGTACTGCACTTAGAATGATGTAA...TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp CCATCTGTAGTTCCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTCTGCAAAGCCGATTCTaGTGTTTTGACGTAAGCATT +
Preference number: 4 (lower is better)
Translates to: PSVVPKFHPNDILEVQLLLQSRF*CFDVSI
Trigger: AATGCTTACGTCAAAACAGCAGAATCGGCTTTGCAG...AAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGGAACTACAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp TCCACTGAGTTATCAACGGGTATTGTAGAGACATTCAAAGTTAGTGTTACTTGCGATGCTGGTTTCGGATaGCAAGGAATCCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: STELSTGIVETFKVSVTCDAGFG*QGILRD
Trigger: ATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATC...GCAAGTAACACTAACTTTGAATGTCTCTACAATACCCGTTGATAACTCAGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TGTGCACTACCTGAAGATGCCACCCTATTACAATGGAGTACTTACGTTTTTAGACTGGCTGGCCACCCATaGAAAATTCATCATGCTGTA +
Preference number: 4 (lower is better)
Translates to: CALPEDATLLQWSTYVFRLAGHP*KIHHAV
Trigger: TACAGCATGATGAATTTTGCATGGGTGGCCAGCCAG...TCTAAAAACGTAAGTACTCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TGCTCTATAGAAGCAACTGATGCAGAGGTTGGTGTACATAACCTGATTACAGTACTGGCTGGCCACCCATaGAAAATTCATCATGCTGTA +
Preference number: 4 (lower is better)
Translates to: CSIEATDAEVGVHNLITVLAGHP*KIHHAV
Trigger: TACAGCATGATGAATTTTGCATGGGTGGCCAGCCAG...TACTGTAATCAGGTTATGTACACCAACCTCTGCATCAGTTGCTTCTATAGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTCTGGCTGGCCACCCATaGAAAATTCATCATGCTGTA +
Preference number: 4 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTLAGHP*KIHHAV
Trigger: TACAGCATGATGAATTTTGCATGGGTGGCCAGCCAG...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GACCTCTATTGCCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGACACCATTTGGTCATTTaGAGGGTTTTGCTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: DLYCQYVHYLKMPPYYNGHHLVI*RVLLSP
Trigger: TGGAGAAAGCAAAACCCTGCAAATGACCAAATGGTG...TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCCTGAGGCAGAAGAATTaGTGGAACCAAGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: TGNSNVLRLECITIILRFLRQKN*WNQGGG
Trigger: TCCGCCTCCTTGGTTCCAGCAATTCTTCTGCCTCAG...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ACAAATGTGGACCTAACACGTAACCATGGAGTTCAAAGGTATCCAACCAAAAAGGTCCCAAAGGAAGCATaGTCCTTGCTCATCCAGTAT +
Preference number: 4 (lower is better)
Translates to: TNVDLTRNHGVQRYPTKKVPKEA*SLLIQY
Trigger: ATACTGGATGAGCAAGGAGCATGCTTCCTTTGGGAC...CTTTTTGGTTGGATACCTTTGAACTCCATGGTTACGTGTTAGGTCCACATTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGAGCCACCTTCTGTGACTaGAAAGCGCTCACCTACTCT +
Preference number: 4 (lower is better)
Translates to: FLKILYAWMVSMLQNITRATFCD*KALTYS
Trigger: AGAGTAGGTGAGCGCTTTGCAGTCACAGAAGGTGGC...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAAGCCACCTTCTGTGACTaGAAAGCGCTCACCTACTCT +
Preference number: 4 (lower is better)
Translates to: STTSTIYSISNEMHLERKATFCD*KALTYS
Trigger: AGAGTAGGTGAGCGCTTTGCAGTCACAGAAGGTGGC...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AATTTTTGCATGAACACTGAGGAAAGGCCCAAAGATCCATCTAGAGCAGGTGGGCCATATCCAACGAGATaGATTTGGAAAGGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: NFCMNTEERPKDPSRAGGPYPTR*IWKGKV
Trigger: CACTTTTCCTTTCCAAATGCATCTCGTTGGATATGG...CCCACCTGCTCTAGATGGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TTACTCACACTGCAGCGTGGGCAGCTAAATGGCCTTCATACCAATGCCATGGTTCACAGGCCTTTGTCATaGAAGTGTGTAATTTTAATT +
Preference number: 4 (lower is better)
Translates to: LLTLQRGQLNGLHTNAMVHRPLS*KCVILI
Trigger: AATTAAAATTACACACTTGCATGACAAAGGCCTGTG...AACCATGGCATTGGTATGAAGGCCATTTAGCTGCCCACGCTGCAGTGTGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420906.6
CDS-3UTR CCA 90 bp AGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGAAGGACTGCCGAGGATTTCTaGTGCCTGCTTCATCTTTAT +
Preference number: 4 (lower is better)
Translates to: RNMMHTMGSMHHLQNVGRTAEDF*CLLHLY
Trigger: ATAAAGATGAAGCAGGCACCAGAAATCCTCGGCAGT...CCTTCCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp AAACAGTCATCAACTACACTCATAGGATCAAGATATTTGGCAACTGACAGTCATAGGCTACTGGAGAGCTaGGCTTTGCTGAGGAACACA +
Preference number: 4 (lower is better)
Translates to: KQSSTTLIGSRYLATDSHRLLES*ALLRNT
Trigger: TGTGTTCCTCAGCAAAGCCCAGCTCTCCAGTAGCCT...ATGACTGTCAGTTGCCAAATATCTTGATCCTATGAGTGTAGTTGATGACTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCAGGCTACTGGAGAGCTaGGCTTTGCTGAGGAACACA +
Preference number: 4 (lower is better)
Translates to: TGNSNVLRLECITIILRFRLLES*ALLRNT
Trigger: TGTGTTCCTCAGCAAAGCCCAGCTCTCCAGTAGCCT...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GGACTTTTCAAGATGATATTACCAAACATAACGGAACCTAGTGAACACATTCCAAGGCTACTGGAGAGCTaGGCTTTGCTGAGGAACACA +
Preference number: 4 (lower is better)
Translates to: GLFKMILPNITEPSEHIPRLLES*ALLRNT
Trigger: TGTGTTCCTCAGCAAAGCCCAGCTCTCCAGTAGCCT...TGGAATGTGTTCACTAGGTTCCGTTATGTTTGGTAATATCATCTTGAAAAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAATTTCAGCTTGTCGGCTaGAATAAAGGGCAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: STTSTIYSISNEMHLERKFQLVG*NKGQGV
Trigger: GACGCCCTGCCCTTTATTCCAGCCGACAAGCTGAAA...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GACCTCTATTGCCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGAATCCCTTTCATTTCCTaGGACTCAAAACGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: DLYCQYVHYLKMPPYYNGIPFIS*DSKRSL
Trigger: CAAACTGCGTTTTGAGTCCCAGGAAATGAAAGGGAT...TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GGCCCCCAGTTATCATCTCCTCATAAACATGACAAAAACAGGACCCATGTCTACTTGTATTTCAACAGGTaGTCTTTGTCTCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: GPQLSSPHKHDKNRTHVYLYFNR*SLSLPV
Trigger: CACTGGAAGAGACAAAGACCACCTGTTGAAATACAA...GTAGACATGGGTCCTGTTTTTGTCATGTTTATGAGGAGATGATAACTGGGGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATGGTAACCCGACACTTTaGACCACACCAAATCACCAA +
Preference number: 4 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNGNPTL*TTPNHQ
Trigger: TTGGTGATTTGGTGTGGTCCAAAGTGTCGGGTTACC...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TGCTCTATAGAAGCAACTGATGCAGAGGTTGGTGTACATAACCTGATTACAGTAGGTAACCCGACACTTTaGACCACACCAAATCACCAA +
Preference number: 4 (lower is better)
Translates to: CSIEATDAEVGVHNLITVGNPTL*TTPNHQ
Trigger: TTGGTGATTTGGTGTGGTCCAAAGTGTCGGGTTACC...TACTGTAATCAGGTTATGTACACCAACCTCTGCATCAGTTGCTTCTATAGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGAAGGATAGCTGTGAAGGAGTaGATCTGCAGAAACCATGCA +
Preference number: 4 (lower is better)
Translates to: RNMMHTMGSMHHLQNVGRIAVKE*ICRNHA
Trigger: TGCATGGTTTCTGCAGATCCACTCCTTCACAGCTAT...CCTTCCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTTATCCAAGCTCTTTCTaGGGCGTCACCAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTYPSSF*GVTKEL
Trigger: CAGTTCTTTGGTGACGCCCCAGAAAGAGCTTGGATA...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TGTGCACTACCTGAAGATGCCACCCTATTACAATGGAGTACTTACGTTTTTAGATATCCAAGCTCTTTCTaGGGCGTCACCAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: CALPEDATLLQWSTYVFRYPSSF*GVTKEL
Trigger: CAGTTCTTTGGTGACGCCCCAGAAAGAGCTTGGATA...TCTAAAAACGTAAGTACTCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TGTGCACTACCTGAAGATGCCACCCTATTACAATGGAGTACTTACGTTTTTAGATCCGCCTTCTCTTCATaGGAATGCACTCTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: CALPEDATLLQWSTYVFRSAFSS*ECTLLS
Trigger: TGAGAGAAGAGTGCATTCCCATGAAGAGAAGGCGGA...TCTAAAAACGTAAGTACTCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCCAGAGCTACACAGTTTaGCCCTCCGCCTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: TGNSNVLRLECITIILRFQSYTV*PSAFSS
Trigger: TGAAGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTG...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AAACAGTCATCAACTACACTCATAGGATCAAGATATTTGGCAACTGACAGTCATCAGAGCTACACAGTTTaGCCCTCCGCCTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: KQSSTTLIGSRYLATDSHQSYTV*PSAFSS
Trigger: TGAAGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTG...ATGACTGTCAGTTGCCAAATATCTTGATCCTATGAGTGTAGTTGATGACTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTCAGAAGACCAAAAACTaGGATGCTGCATCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTQKTKN*DAASPF
Trigger: GAAGGGAGATGCAGCATCCCAGTTTTTGGTCTTCTG...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GGACTTTTCAAGATGATATTACCAAACATAACGGAACCTAGTGAACACATTCCACCACCAGGGCAAACTTaGTGTTGTAGCGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: GLFKMILPNITEPSEHIPPPGQT*CCSVLS
Trigger: AGAGAGCACGCTACAACACCAAGTTTGCCCTGGTGG...TGGAATGTGTTCACTAGGTTCCGTTATGTTTGGTAATATCATCTTGAAAAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCACCACCAGGGCAAACTTaGTGTTGTAGCGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSPPGQT*CCSVLS
Trigger: AGAGAGCACGCTACAACACCAAGTTTGCCCTGGTGG...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGAAGGAGGCTGCCTCCATaGCCTTGTAAGAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: FLKILYAWMVSMLQNITRRRLPP*PCKSLF
Trigger: GAACAAGCTCTTACAAGGCCATGGAGGCAGCCTCCT...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AATTATCTACACGTATCAAACTGTAAAGCAGCCCCAGTCCCACCATCCGTGAACATTTCGCTTCTTCAGTaGTTTACATGCATCAGACAG +
Preference number: 4 (lower is better)
Translates to: NYLHVSNCKAAPVPPSVNISLLQ*FTCIRQ
Trigger: CTGTCTGATGCATGTAAACCACTGAAGAAGCGAAAT...GTTCACGGATGGTGGGACTGGGGCTGCTTTACAGTTTGATACGTGTAGATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGACTGAAGATGCTGCCGTaGAAGCCCGATTTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: FLKILYAWMVSMLQNITRLKMLP*KPDFAS
Trigger: AGAAGCGAAATCGGGCTTCCACGGCAGCATCTTCAG...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TCAGACTTTTTGGATGAGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGTTGGGGGAACATTTTTaGGATGGCAAACTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: SDFLDETDTSVCVSSALSLGEHF*DGKLLP
Trigger: CGGCAGAAGTTTGCCATCCCAAAAATGTTCCCCCAA...CGAAAGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp TTTTGGATGAGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGGAGAGTAGTTTCCTTTaGGGCCAGCGTCTATTATAC +
Preference number: 4 (lower is better)
Translates to: FWMRQILQFVFRLHFRMGESSFL*GQRLLY
Trigger: GTATAATAGACGCTGGCCCCAAAGGAAACTACTCTC...CCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp TCCACTGAGTTATCAACGGGTATTGTAGAGACATTCAAAGTTAGTGTTACTTGCGTTTCTAGCGACCCTTaGGAAAAGCCTACGCTACAC +
Preference number: 4 (lower is better)
Translates to: STELSTGIVETFKVSVTCVSSDP*EKPTLH
Trigger: GTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAAC...GCAAGTAACACTAACTTTGAATGTCTCTACAATACCCGTTGATAACTCAGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp CCATCTGTAGTTCCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTAGCTTCTCACTAGGATaGAAAAGAAGCGTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: PSVVPKFHPNDILEVQLLSFSLG*KRSVSE
Trigger: CTCAGAAACGCTTCTTTTCCATCCTAGTGAGAAGCT...AAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGGAACTACAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATGGAATCCTGAGGGATTaGGGCGGTTTTTGTGTTTTG +
Preference number: 4 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNGILRD*GGFCVL
Trigger: CAAAACACAAAAACCGCCCCAATCCCTCAGGATTCC...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAATTACAGTATCCCCTTaGTCCGGGGCCTTGGATCAA +
Preference number: 4 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGITVSP*SGALDQ
Trigger: TTGATCCAAGGCCCCGGACCAAGGGGATACTGTAAT...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAGGAGCACCTATGCGCTaGCTGACTTCTAATGCATCT +
Preference number: 4 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGGAPMR*LTSNAS
Trigger: AGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCC...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAACAGGAAACCAGGAGATaGTCCTCTCGGAAAACTCCG +
Preference number: 4 (lower is better)
Translates to: STTSTIYSISNEMHLERKQETRR*SSRKTP
Trigger: CGGAGTTTTCCGAGAGGACCATCTCCTGGTTTCCTG...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TGTGTCCTCAGCTTCAGCATCTTCTGTAGGGTCCTGTATCCTCTTTGTGTGGTTAGATGTAACTACACCTaGAGTCAGTATGCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: CVLSFSIFCRVLYPLCVVRCNYT*SQYAEK
Trigger: TTTTTCAGCATACTGACTCCAGGTGTAGTTACATCT...AACCACACAAAGAGGATACAGGACCCTACAGAAGATGCTGAAGCTGAGGACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR CCA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCATTGCTCCTGACAGCATaGCTCTCACACAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSLLLTA*LSHSIL
Trigger: GAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAA...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCACTCACATCAGGCTTCTaGCAAGAGCCTTCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSLTSGF*QEPSQE
Trigger: CTCCTGAGAAGGCTCTTGCCAGAAGCCTGATGTGAG...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TGTGTCCTCAGCTTCAGCATCTTCTGTAGGGTCCTGTATCCTCTTTGTGTGGTTAAAATACTATATGCCTaGATGGTCAGCATGCTTCAA +
Preference number: 4 (lower is better)
Translates to: CVLSFSIFCRVLYPLCVVKILYA*MVSMLQ
Trigger: TTGAAGCATGCTGACCATCCAGGCATATAGTATTTT...AACCACACAAAGAGGATACAGGACCCTACAGAAGATGCTGAAGCTGAGGACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR CCA 90 bp GGACTTTTCAAGATGATATTACCAAACATAACGGAACCTAGTGAACACATTCCAACTGCTAAAAGCACGTaGCCCTTCAGGGTGACCTGT +
Preference number: 4 (lower is better)
Translates to: GLFKMILPNITEPSEHIPTAKST*PFRVTC
Trigger: ACAGGTCACCCTGAAGGGCCACGTGCTTTTAGCAGT...TGGAATGTGTTCACTAGGTTCCGTTATGTTTGGTAATATCATCTTGAAAAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
3UTR CAA 72 bp TACTCCTTTTTGGCAGTCACTCCTCGCTCAGACTTTTaGGATGAGACAGATACTTCAGTTTGTGTTTCGTCT +
Preference number: 4 (lower is better)
Translates to: YSFLAVTPRSDF*DETDTSVCVSS
Trigger: AGACGAAACACAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGAGCGAGGAGTGACTGCCAAAAAGGAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR TCA 90 bp TATAAGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGCCATTTTCTTCTGACTaGGACACATCAGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: YKEHDAHYGIYASPSKCRPFSSD*DTSAAL
Trigger: CAGTGCTGCTGATGTGTCTCAGTCAGAAGAAAATGG...CCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR TCA 90 bp TCTTTAGACCCAAAGAAAAACACAGGGAATTCTCCAATCTCGTGCTTCATTTTCTTCTTCACTGACTCCTaGGGATTCTGCCATTTCTCC +
Preference number: 4 (lower is better)
Translates to: SLDPKKNTGNSPISCFIFFFTDS*GFCHFS
Trigger: GGAGAAATGGCAGAATCCTCAGGAGTCAGTGAAGAA...GAAAATGAAGCACGAGATTGGAGAATTCCCTGTGTTTTTCTTTGGGTCTAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp GAAAAACACAGGGAATTCTCCAATCTCGTGCTTCATTTTCTGAATATTTGGGGGTCTCGGGCTTCCCTCTaGAGCTTAATTTCACGAAAA +
Preference number: 4 (lower is better)
Translates to: EKHREFSNLVLHFLNIWGSRASL*SLISRK
Trigger: TTTTCGTGAAATTAAGCTTCAGAGGGAAGCCCGAGA...CCCCCAAATATTCAGAAAATGAAGCACGAGATTGGAGAATTCCCTGTGTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR TCA 90 bp TGCTCTATAGAAGCAACTGATGCAGAGGTTGGTGTACATAACCTGATTACAGTACTCTATAGAAGCAACTaGTGCAGAGGTTGGTGTACA +
Preference number: 4 (lower is better)
Translates to: CSIEATDAEVGVHNLITVLYRSN*CRGWCT
Trigger: TGTACACCAACCTCTGCATCAGTTGCTTCTATAGAG...TACTGTAATCAGGTTATGTACACCAACCTCTGCATCAGTTGCTTCTATAGAGCA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TCTGCCTTTCACGACATGAAAGGTTGTGTCATGAAACCTCGCTTAAGTTTCCTAATGAAACATGAGGGCTaGTGCTCTATAGAAGCAACT +
Preference number: 4 (lower is better)
Translates to: SAFHDMKGCVMKPRLSFLMKHEG*CSIEAT
Trigger: AGTTGCTTCTATAGAGCATCAGCCCTCATGTTTCAT...TAGGAAACTTAAGCGAGGTTTCATGACACAACCTTTCATGTCGTGAAAGGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTCCGACATTAAGACAATaGAACATGAGGGCTGATGCT +
Preference number: 4 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTPTLRQ*NMRADA
Trigger: AGCATCAGCCCTCATGTTTCATTGTCTTAATGTCGG...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAACTCGCATGGTACTGTaGATAGCACACCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGTRMVL*IAHLLL
Trigger: AAGCAGAAGGTGTGCTATTCACAGTACCATGCGAGT...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAACCCTGGTTATTCAGCTaGTGCCAATGTCATGCTGCT +
Preference number: 4 (lower is better)
Translates to: STTSTIYSISNEMHLERKPWLFS*CQCHAA
Trigger: AGCAGCATGACATTGGCATCAGCTGAATAACCAGGG...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp ACAAATGTGGACCTAACACGTAACCATGGAGTTCAAAGGTATCCAACCAAAAAGTACTCAAGACAGCACTaGGATGTAACTACACCTGGA +
Preference number: 4 (lower is better)
Translates to: TNVDLTRNHGVQRYPTKKYSRQH*DVTTPG
Trigger: TCCAGGTGTAGTTACATCTCAGTGCTGTCTTGAGTA...CTTTTTGGTTGGATACCTTTGAACTCCATGGTTACGTGTTAGGTCCACATTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AGTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCCCTGCTTCATCTTTATaGACTTTACAACACTCTGAA +
Preference number: 4 (lower is better)
Translates to: SVYDDTPPAAASWNITSFPASSL*TLQHSE
Trigger: TTCAGAGTGTTGTAAAGTGCATAAAGATGAAGCAGG...GAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000678714.1
CDS-3UTR GCA 90 bp AATTATCTACACGTATCAAACTGTAAAGCAGCCCCAGTCCCACCATCCGTGAACCCTGCTTCATCTTTATaGACTTTACAACACTCTGAA +
Preference number: 4 (lower is better)
Translates to: NYLHVSNCKAAPVPPSVNPASSL*TLQHSE
Trigger: TTCAGAGTGTTGTAAAGTGCATAAAGATGAAGCAGG...GTTCACGGATGGTGGGACTGGGGCTGCTTTACAGTTTGATACGTGTAGATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGAGATCTGCAGAAACCATaGAAGGCCACCAAGGGTAAC +
Preference number: 4 (lower is better)
Translates to: FLKILYAWMVSMLQNITRDLQKP*KATKGN
Trigger: GTTACCCTTGGTGGCCTTGCATGGTTTCTGCAGATC...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AAACAGTCATCAACTACACTCATAGGATCAAGATATTTGGCAACTGACAGTCATGCTCCTCCACTGACATaGTTGCAGCTTCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: KQSSTTLIGSRYLATDSHAPPLT*LQLLLL
Trigger: AAGCAGAAGAAGCTGCAAGCATGTCAGTGGAGGAGC...ATGACTGTCAGTTGCCAAATATCTTGATCCTATGAGTGTAGTTGATGACTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCAAGACTCTGCAGCAATaGCAGCCTCCTTGGCTACTT +
Preference number: 4 (lower is better)
Translates to: TGNSNVLRLECITIILRFKTLQQ*QPPWLL
Trigger: AAGTAGCCAAGGAGGCTGGCATTGCTGCAGAGTCTT...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAACTCTTCCGAAGACTGTaGTTGTCCGTCCTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: STTSTIYSISNEMHLERKLFRRL*LSVLSL
Trigger: AAGACTCAGGACGGACAAGCACAGTCTTCGGAAGAG...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AATTATCTACACGTATCAAACTGTAAAGCAGCCCCAGTCCCACCATCCGTGAACCTTCAGTGGTTTACATaGATCAGACAGATTTTTCGT +
Preference number: 4 (lower is better)
Translates to: NYLHVSNCKAAPVPPSVNLQWFT*IRQIFR
Trigger: ACGAAAAATCTGTCTGATGCATGTAAACCACTGAAG...GTTCACGGATGGTGGGACTGGGGCTGCTTTACAGTTTGATACGTGTAGATAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp CGCTCAGACTTTTTGGATGAGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTTTCAGCTTCTTGCAGTaGGTTTTTGAAGACTCTTCC +
Preference number: 4 (lower is better)
Translates to: RSDFLDETDTSVCVSSALFSFLQ*VFEDSS
Trigger: GGAAGAGTCTTCAAAAACGCACTGCAAGAAGCTGAA...AAGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGAGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR GCA 90 bp AAACAGTCATCAACTACACTCATAGGATCAAGATATTTGGCAACTGACAGTCATGATGTCGTTCTCGTGTaGGTGCTTGATTCTCGCCAT +
Preference number: 4 (lower is better)
Translates to: KQSSTTLIGSRYLATDSHDVVLV*VLDSRH
Trigger: ATGGCGAGAATCAAGCACGCACACGAGAACGACATC...ATGACTGTCAGTTGCCAAATATCTTGATCCTATGAGTGTAGTTGATGACTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATATGAAGTCGAAGGTTTaGCACACACGTCACAATGAT +
Preference number: 4 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHMKSKV*HTRHND
Trigger: ATCATTGTGACGTGTGTGGCAAACCTTCGACTTCAT...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR GCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAACACAGCCAAAGAATCTaGCGGGAATTAACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: STTSTIYSISNEMHLERKHSQRI*RELTVG
Trigger: GCCCACAGTTAATTCCCGGCAGATTCTTTGGCTGTG...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ACAAATGTGGACCTAACACGTAACCATGGAGTTCAAAGGTATCCAACCAAAAAGATGCCAATGTCATGCTaGTCTTTGGACACCATTTGG +
Preference number: 4 (lower is better)
Translates to: TNVDLTRNHGVQRYPTKKMPMSC*SLDTIW
Trigger: CCAAATGGTGTCCAAAGAGCAGCATGACATTGGCAT...CTTTTTGGTTGGATACCTTTGAACTCCATGGTTACGTGTTAGGTCCACATTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAACACACAGTCACCCTCTaGCTTTCACGACATGAAAGG +
Preference number: 4 (lower is better)
Translates to: STTSTIYSISNEMHLERKHTVTL*LSRHER
Trigger: CCTTTCATGTCGTGAAAGGCAGAGGGTGACTGTGTG...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GGACTTTTCAAGATGATATTACCAAACATAACGGAACCTAGTGAACACATTCCATCCTTTCCTGTGGTGTaGTCAGCTCTTAACGTCTCC +
Preference number: 4 (lower is better)
Translates to: GLFKMILPNITEPSEHIPSFPVV*SALNVS
Trigger: GGAGACGTTAAGAGCTGAGCACACCACAGGAAAGGA...TGGAATGTGTTCACTAGGTTCCGTTATGTTTGGTAATATCATCTTGAAAAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AATTTTTGCATGAACACTGAGGAAAGGCCCAAAGATCCATCTAGAGCAGGTGGGTACCCGAGAGTTATATaGAAAAAGGCCAACAACTAT +
Preference number: 4 (lower is better)
Translates to: NFCMNTEERPKDPSRAGGYPRVI*KKANNY
Trigger: ATAGTTGTTGGCCTTTTTGCATATAACTCTCGGGTA...CCCACCTGCTCTAGATGGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ACAAATGTGGACCTAACACGTAACCATGGAGTTCAAAGGTATCCAACCAAAAAGCCTGGATGGTCAGCATaGTTCAAAATATTACCCGAG +
Preference number: 4 (lower is better)
Translates to: TNVDLTRNHGVQRYPTKKPGWSA*FKILPE
Trigger: CTCGGGTAATATTTTGAAGCATGCTGACCATCCAGG...CTTTTTGGTTGGATACCTTTGAACTCCATGGTTACGTGTTAGGTCCACATTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAAAGGCTGTGCACTGTCTaGGAAGGACTTGAGGACAAT +
Preference number: 4 (lower is better)
Translates to: STTSTIYSISNEMHLERKRLCTV*EGLEDN
Trigger: ATTGTCCTCAAGTCCTTCGCAGACAGTGCACAGCCT...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TGTGCACTACCTGAAGATGCCACCCTATTACAATGGAGTACTTACGTTTTTAGACTTCAGGGCAGGGAATaGAGTCTCCTTGATCTATTA +
Preference number: 4 (lower is better)
Translates to: CALPEDATLLQWSTYVFRLQGRE*SLLDLL
Trigger: TAATAGATCAAGGAGACTGCATTCCCTGCCCTGAAG...TCTAAAAACGTAAGTACTCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ACAAATGTGGACCTAACACGTAACCATGGAGTTCAAAGGTATCCAACCAAAAAGCTTCAGGGCAGGGAATaGAGTCTCCTTGATCTATTA +
Preference number: 4 (lower is better)
Translates to: TNVDLTRNHGVQRYPTKKLQGRE*SLLDLL
Trigger: TAATAGATCAAGGAGACTGCATTCCCTGCCCTGAAG...CTTTTTGGTTGGATACCTTTGAACTCCATGGTTACGTGTTAGGTCCACATTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATATACATGGCCTTCATACCAATaGCATGGTTATCGTTATTAT +
Preference number: 4 (lower is better)
Translates to: DPATLASCITLNQSLRYTWPSYQ*HGYRYY
Trigger: ATAATAACGATAACCATGGCATTGGTATGAAGGCCA...TGTATATCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTACTGCCGAGGATTTCTaGTGCCTGCTTCATCTTTAT +
Preference number: 4 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTTAEDF*CLLHLY
Trigger: ATAAAGATGAAGCAGGCACCAGAAATCCTCGGCAGT...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGAAGGATCCCTTTCATTTCCTaGGACTCAAAACGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: RNMMHTMGSMHHLQNVGRIPFIS*DSKRSL
Trigger: CAAACTGCGTTTTGAGTCCCAGGAAATGAAAGGGAT...CCTTCCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp TCAGACTTTTTGGATGAGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGATAGCTGTGAAGGAGTaGATCTGCAGAAACCATGCA +
Preference number: 4 (lower is better)
Translates to: SDFLDETDTSVCVSSALSIAVKE*ICRNHA
Trigger: TGCATGGTTTCTGCAGATCCACTCCTTCACAGCTAT...CGAAAGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATATAGCTGTGAAGGAGTaGATCTGCAGAAACCATGCA +
Preference number: 4 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNIAVKE*ICRNHA
Trigger: TGCATGGTTTCTGCAGATCCACTCCTTCACAGCTAT...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp TATAAGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGCAGAAGACCAAAAACTaGGATGCTGCATCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: YKEHDAHYGIYASPSKCRQKTKN*DAASPF
Trigger: GAAGGGAGATGCAGCATCCCAGTTTTTGGTCTTCTG...CCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp CGCTCAGACTTTTTGGATGAGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTCTCGCTCAGACTTTTTaGATGAGACAGATACTTCAG +
Preference number: 4 (lower is better)
Translates to: RSDFLDETDTSVCVSSALLAQTF*MRQILQ
Trigger: CTGAAGTATCTGTCTCATCCAAAAAGTCTGAGCGAG...AAGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGAGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR CCA 90 bp GGACTTTTCAAGATGATATTACCAAACATAACGGAACCTAGTGAACACATTCCATCCTGGCATCTGAAGTaGGACAATGCTGCCACACAT +
Preference number: 4 (lower is better)
Translates to: GLFKMILPNITEPSEHIPSWHLK*DNAATH
Trigger: ATGTGTGGCAGCATTGTCCCACTTCAGATGCCAGGA...TGGAATGTGTTCACTAGGTTCCGTTATGTTTGGTAATATCATCTTGAAAAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGACTCTTGGCAAGCCAATaGTCCTCCCTAAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGLLASQ*SSLSSF
Trigger: GAAAGAACTTAGGGAGGACCATTGGCTTGCCAAGAG...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAGAATTTCTGTACTCTTaGCAAGCCAATGGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGEFLYS*QANGPP
Trigger: GGGAGGACCATTGGCTTGCCAAGAGTACAGAAATTC...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAACCATTTTCTTCTGACTaGGACACATCAGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: STTSTIYSISNEMHLERKPFSSD*DTSAAL
Trigger: CAGTGCTGCTGATGTGTCTCAGTCAGAAGAAAATGG...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAATTCTTCACTGACTCCTaGGGATTCTGCCATTTCTCC +
Preference number: 4 (lower is better)
Translates to: STTSTIYSISNEMHLERKFFTDS*GFCHFS
Trigger: GGAGAAATGGCAGAATCCTCAGGAGTCAGTGAAGAA...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGATGGCCGTTTTGTCAGTaGTTGTGTCTCTCTTCCGAA +
Preference number: 4 (lower is better)
Translates to: FLKILYAWMVSMLQNITRWPFCQ*LCLSSE
Trigger: TTCGGAAGAGAGACACAATCACTGACAAAACGGCCA...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATCTCAGACTTTTTGGATaGGACAGATACTTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHLRLFG*DRYFSL
Trigger: CAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGAG...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATAGGAGCATAAATCTATaGGCCGATCCAGTATTTTCT +
Preference number: 4 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHRSINL*ADPVFS
Trigger: AGAAAATACTGGATCGGCTCATAGATTTATGCTCCT...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp TTTTGCTTTCTCCATAATATAGAGGGAGCACCTATGCGCTGGCTGACTTCTAATCGGATTAAATGGCCTTaGTTAGTTATCTTACCTTGG +
Preference number: 4 (lower is better)
Translates to: FCFLHNIEGAPMRWLTSNRIKWP*LVILPW
Trigger: CCAAGGTAAGATAACTAATCAAGGCCATTTAATCCG...ATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTCTATATTATGGAGAAAGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp ACAAATGTGGACCTAACACGTAACCATGGAGTTCAAAGGTATCCAACCAAAAAGTTGGTGTACATAACCTaGTTACAGTATCCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: TNVDLTRNHGVQRYPTKKLVYIT*LQYPLG
Trigger: ACCAAGGGGATACTGTAATCAGGTTATGTACACCAA...CTTTTTGGTTGGATACCTTTGAACTCCATGGTTACGTGTTAGGTCCACATTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TGCTCTATAGAAGCAACTGATGCAGAGGTTGGTGTACATAACCTGATTACAGTATTGGTGTACATAACCTaGTTACAGTATCCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: CSIEATDAEVGVHNLITVLVYIT*LQYPLG
Trigger: ACCAAGGGGATACTGTAATCAGGTTATGTACACCAA...TACTGTAATCAGGTTATGTACACCAACCTCTGCATCAGTTGCTTCTATAGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGACTCTATAGAAGCAACTaGTGCAGAGGTTGGTGTACA +
Preference number: 4 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGLYRSN*CRGWCT
Trigger: TGTACACCAACCTCTGCATCAGTTGCTTCTATAGAG...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTAATATGTGCACTACCTaGAGATGCCACCCTATTACA +
Preference number: 4 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTNMCTT*RCHPIT
Trigger: TGTAATAGGGTGGCATCTTCAGGTAGTGCACATATT...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TGTGCACTACCTGAAGATGCCACCCTATTACAATGGAGTACTTACGTTTTTAGAAATATGTGCACTACCTaGAGATGCCACCCTATTACA +
Preference number: 4 (lower is better)
Translates to: CALPEDATLLQWSTYVFRNMCTT*RCHPIT
Trigger: TGTAATAGGGTGGCATCTTCAGGTAGTGCACATATT...TCTAAAAACGTAAGTACTCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGATTTTTGCATGAACACTaGGGAAAGGCCCAAAGATCC +
Preference number: 4 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGFLHEH*GKAQRS
Trigger: GGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAA...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp TTTTGCTTTCTCCATAATATAGAGGGAGCACCTATGCGCTGGCTGACTTCTAATCATTTAATTTTTGCATaGACACTGAGGAAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: FCFLHNIEGAPMRWLTSNHLIFA*TLRKGP
Trigger: TGGGCCTTTCCTCAGTGTTCATGCAAAAATTAAATG...ATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTCTATATTATGGAGAAAGCAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp GGACTTTTCAAGATGATATTACCAAACATAACGGAACCTAGTGAACACATTCCATGTAAAGAAGGAAGCTaGTGGCGAGAAGTACCTCCA +
Preference number: 4 (lower is better)
Translates to: GLFKMILPNITEPSEHIPCKEGS*WREVPP
Trigger: TGGAGGTACTTCTCGCCATCAGCTTCCTTCTTTACA...TGGAATGTGTTCACTAGGTTCCGTTATGTTTGGTAATATCATCTTGAAAAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCTGTAAAGAAGGAAGCTaGTGGCGAGAAGTACCTCCA +
Preference number: 4 (lower is better)
Translates to: TGNSNVLRLECITIILRFCKEGS*WREVPP
Trigger: TGGAGGTACTTCTCGCCATCAGCTTCCTTCTTTACA...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp CATATAAGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTACCAATGCTGCGCTTATaGAGTCTGAGCATTACTCAC +
Preference number: 4 (lower is better)
Translates to: HIRNMMHTMGSMHHLQNVPMLRL*SLSITH
Trigger: GTGAGTAATGCTCAGACTTCATAAGCGCAGCATTGG...TACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCTTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp TATTACATCATTCTAAGTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACACAGAAAGGGGACTCTaGTTGATGCTAAATTCCATC +
Preference number: 4 (lower is better)
Translates to: YYIILSAVQSSWVQIQLDTERGL*LMLNSI
Trigger: GATGGAATTTAGCATCAAGCAGAGTCCCCTTTCTGT...GTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCACTTAGAATGATGTAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000678714.1
CDS-3UTR GCA 90 bp GACCTCTATTGCCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGACCTGCTTCATCTTTATaGACTTTACAACACTCTGAA +
Preference number: 4 (lower is better)
Translates to: DLYCQYVHYLKMPPYYNGPASSL*TLQHSE
Trigger: TTCAGAGTGTTGTAAAGTGCATAAAGATGAAGCAGG...TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCAGCCGAGGATTTCTGGTaGCTGCTTCATCTTTATGCA +
Preference number: 4 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSAEDFW*LLHLYA
Trigger: TGCATAAAGATGAAGCAGGCACCAGAAATCCTCGGC...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTTTCTCTTCATGGGAATaGACTCTTCTCTCACAGACT +
Preference number: 4 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTFSSWE*TLLSQT
Trigger: AGTCTGTGAGAGAAGAGTGCATTCCCATGAAGAGAA...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCACTTCAGTGGTTTACATaGATCAGACAGATTTTTCGT +
Preference number: 4 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSLQWFT*IRQIFR
Trigger: ACGAAAAATCTGTCTGATGCATGTAAACCACTGAAG...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp TATTACATCATTCTAAGTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACTTACATCATTCTAAGTaGAGTACAGAGCAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: YYIILSAVQSSWVQIQLDLHHSK*STEQLG
Trigger: ACCCAGCTGCTCTGTACTGCACTTAGAATGATGTAA...GTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCACTTAGAATGATGTAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000678714.1
CDS-3UTR GCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATTTCAGCTTCTTGCAGTaGGTTTTTGAAGACTCTTCC +
Preference number: 4 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNFSFLQ*VFEDSS
Trigger: GGAAGAGTCTTCAAAAACGCACTGCAAGAAGCTGAA...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR GCA 90 bp GAAAAACACAGGGAATTCTCCAATCTCGTGCTTCATTTTCTGAATATTTGGGGGCAGGTCCAAAGACACTaGAGTTTTTACCAAGGCATA +
Preference number: 4 (lower is better)
Translates to: EKHREFSNLVLHFLNIWGQVQRH*SFYQGI
Trigger: TATGCCTTGGTAAAAACTGCAGTGTCTTTGGACCTG...CCCCCAAATATTCAGAAAATGAAGCACGAGATTGGAGAATTCCCTGTGTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGAGCCTTTTCCTTACCATaGAAAAATGCGGACACCTGG +
Preference number: 4 (lower is better)
Translates to: FLKILYAWMVSMLQNITRAFSLP*KNADTW
Trigger: CCAGGTGTCCGCATTTTTGCATGGTAAGGAAAAGGC...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TCTGCCTTTCACGACATGAAAGGTTGTGTCATGAAACCTCGCTTAAGTTTCCTATATTTCATCCTCGCATaGATAATGCAGTCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: SAFHDMKGCVMKPRLSFLYFILA*IMQSRG
Trigger: TCCTCTTGACTGCATTATGCATGCGAGGATGAAATA...TAGGAAACTTAAGCGAGGTTTCATGACACAACCTTTCATGTCGTGAAAGGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAAGTCCCAAAGGAAGCATaGTCCTTGCTCATCCAGTAT +
Preference number: 4 (lower is better)
Translates to: STTSTIYSISNEMHLERKVPKEA*SLLIQY
Trigger: ATACTGGATGAGCAAGGAGCATGCTTCCTTTGGGAC...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAAAGTCGTCTTCTAACCTaGACAGGCTTTTGTGTAGCC +
Preference number: 4 (lower is better)
Translates to: STTSTIYSISNEMHLERKSRLLT*TGFCVA
Trigger: GGCTACACAAAAGCCTGTGCAGGTTAGAAGACGACT...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TCAGACTTTTTGGATGAGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGATCCCTTTCATTTCCTaGGACTCAAAACGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: SDFLDETDTSVCVSSALSIPFIS*DSKRSL
Trigger: CAAACTGCGTTTTGAGTCCCAGGAAATGAAAGGGAT...CGAAAGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CCA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATTTGTATTTCAACAGGTaGTCTTTGTCTCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHLYFNR*SLSLPV
Trigger: CACTGGAAGAGACAAAGACCACCTGTTGAAATACAA...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CCA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCGGTAACCCGACACTTTaGACCACACCAAATCACCAA +
Preference number: 4 (lower is better)
Translates to: TGNSNVLRLECITIILRFGNPTL*TTPNHQ
Trigger: TTGGTGATTTGGTGTGGTCCAAAGTGTCGGGTTACC...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp CATATAAGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGTAACCCGACACTTTaGACCACACCAAATCACCAA +
Preference number: 4 (lower is better)
Translates to: HIRNMMHTMGSMHHLQNVGNPTL*TTPNHQ
Trigger: TTGGTGATTTGGTGTGGTCCAAAGTGTCGGGTTACC...TACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCTTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp CTCCTCATAAACATGACAAAAACAGGACCCATGTCTACAATGAGAAAAACAGCAATAGCTGTGAAGGAGTaGATCTGCAGAAACCATGCA +
Preference number: 4 (lower is better)
Translates to: LLINMTKTGPMSTMRKTAIAVKE*ICRNHA
Trigger: TGCATGGTTTCTGCAGATCCACTCCTTCACAGCTAT...TGCTGTTTTTCTCATTGTAGACATGGGTCCTGTTTTTGTCATGTTTATGAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CCA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCACAAATCCAACTTGACTaGTGTGGGCTCCCACAAAAG +
Preference number: 4 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSQIQLD*CGLPQK
Trigger: CTTTTGTGGGAGCCCACACCAGTCAAGTTGGATTTG...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAACTCTTGGCAAGCCAATaGTCCTCCCTAAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: STTSTIYSISNEMHLERKLLASQ*SSLSSF
Trigger: GAAAGAACTTAGGGAGGACCATTGGCTTGCCAAGAG...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGATGGAAATGCTTATACTaGCTTCCATGCCGGGACACA +
Preference number: 4 (lower is better)
Translates to: FLKILYAWMVSMLQNITRWKCLY*LPCRDT
Trigger: TGTGTCCCGGCATGGAAGCCAGTATAAGCATTTCCA...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GACCTCTATTGCCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGAAAAATACTATATGCCTaGATGGTCAGCATGCTTCAA +
Preference number: 4 (lower is better)
Translates to: DLYCQYVHYLKMPPYYNGKILYA*MVSMLQ
Trigger: TTGAAGCATGCTGACCATCCAGGCATATAGTATTTT...TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TATAAGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGGGCAGCAGCCCCAAATaGCTTTATTTTGCTATCATG +
Preference number: 4 (lower is better)
Translates to: YKEHDAHYGIYASPSKCRGSSPK*LYFAIM
Trigger: CATGATAGCAAAATAAAGCCATTTGGGGCTGCTGCC...CCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCTTGTCCATTTTCTTCTaGCTGAGACACATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TGNSNVLRLECITIILRFLSIFF*LRHISS
Trigger: GCTGCTGATGTGTCTCAGTCAGAAGAAAATGGACAA...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATGAAAAGAAGCGTTTCTaGGGAACAATTCACATTAGT +
Preference number: 4 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHEKKRF*GTIHIS
Trigger: ACTAATGTGAATTGTTCCTCAGAAACGCTTCTTTTC...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR TCA 90 bp ACAAATGTGGACCTAACACGTAACCATGGAGTTCAAAGGTATCCAACCAAAAAGCATTTAATTTTTGCATaGACACTGAGGAAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: TNVDLTRNHGVQRYPTKKHLIFA*TLRKGP
Trigger: TGGGCCTTTCCTCAGTGTTCATGCAAAAATTAAATG...CTTTTTGGTTGGATACCTTTGAACTCCATGGTTACGTGTTAGGTCCACATTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp AGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGAAGGAAGCAACAACTCAAGTaGATAACCGGACCAAAATTA +
Preference number: 4 (lower is better)
Translates to: RNMMHTMGSMHHLQNVGRKQQLK*ITGPKL
Trigger: TAATTTTGGTCCGGTTATTCACTTGAGTTGTTGCTT...CCTTCCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR GCA 90 bp AGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGAAGGCTTCAGTGGTTTACATaGATCAGACAGATTTTTCGT +
Preference number: 4 (lower is better)
Translates to: RNMMHTMGSMHHLQNVGRLQWFT*IRQIFR
Trigger: ACGAAAAATCTGTCTGATGCATGTAAACCACTGAAG...CCTTCCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp TCTGCCTTTCACGACATGAAAGGTTGTGTCATGAAACCTCGCTTAAGTTTCCTACTTCAGTGGTTTACATaGATCAGACAGATTTTTCGT +
Preference number: 4 (lower is better)
Translates to: SAFHDMKGCVMKPRLSFLLQWFT*IRQIFR
Trigger: ACGAAAAATCTGTCTGATGCATGTAAACCACTGAAG...TAGGAAACTTAAGCGAGGTTTCATGACACAACCTTTCATGTCGTGAAAGGCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TGTGCACTACCTGAAGATGCCACCCTATTACAATGGAGTACTTACGTTTTTAGATATTTCATCCTCGCATaGATAATGCAGTCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: CALPEDATLLQWSTYVFRYFILA*IMQSRG
Trigger: TCCTCTTGACTGCATTATGCATGCGAGGATGAAATA...TCTAAAAACGTAAGTACTCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ACAAATGTGGACCTAACACGTAACCATGGAGTTCAAAGGTATCCAACCAAAAAGTTCACCTCTAGTGAATaGCTCAAGTTTTACACTGGA +
Preference number: 4 (lower is better)
Translates to: TNVDLTRNHGVQRYPTKKFTSSE*LKFYTG
Trigger: TCCAGTGTAAAACTTGAGGCATTCACTAGAGGTGAA...CTTTTTGGTTGGATACCTTTGAACTCCATGGTTACGTGTTAGGTCCACATTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCAGGAAGCATGCTCCTTaGTCATCCAGTATAGGAATC +
Preference number: 4 (lower is better)
Translates to: TGNSNVLRLECITIILRFRKHAP*SSSIGI
Trigger: GATTCCTATACTGGATGAGCAAGGAGCATGCTTCCT...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCAACTGCCGAGGATTTCTaGTGCCTGCTTCATCTTTAT +
Preference number: 4 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSTAEDF*CLLHLY
Trigger: ATAAAGATGAAGCAGGCACCAGAAATCCTCGGCAGT...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GAAAAACACAGGGAATTCTCCAATCTCGTGCTTCATTTTCTGAATATTTGGGGGTTGTATTTCAACAGGTaGTCTTTGTCTCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: EKHREFSNLVLHFLNIWGLYFNR*SLSLPV
Trigger: CACTGGAAGAGACAAAGACCACCTGTTGAAATACAA...CCCCCAAATATTCAGAAAATGAAGCACGAGATTGGAGAATTCCCTGTGTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CCA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGAATAGCTGTGAAGGAGTaGATCTGCAGAAACCATGCA +
Preference number: 4 (lower is better)
Translates to: FLKILYAWMVSMLQNITRIAVKE*ICRNHA
Trigger: TGCATGGTTTCTGCAGATCCACTCCTTCACAGCTAT...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATTTTCTTAGGACACTTTaGGAGAAGTTAGAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHFLRTL*EKLESE
Trigger: TTCAGACTCTAACTTCTCCCAAAGTGTCCTAAGAAA...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AAACAGTCATCAACTACACTCATAGGATCAAGATATTTGGCAACTGACAGTCATTTTAGGTGCAGATGCTaGTTTCGGATGCCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: KQSSTTLIGSRYLATDSHFRCRC*FRMPRN
Trigger: ATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAA...ATGACTGTCAGTTGCCAAATATCTTGATCCTATGAGTGTAGTTGATGACTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGATGTCATGCTGCTCTTTaGACACCATTTGGTCATTTG +
Preference number: 4 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGCHAAL*TPFGHL
Trigger: CAAATGACCAAATGGTGTCCAAAGAGCAGCATGACA...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TGTGCACTACCTGAAGATGCCACCCTATTACAATGGAGTACTTACGTTTTTAGAAAAAGGGCTCTCACCTaGTCTGTATACAAAAGTCTA +
Preference number: 4 (lower is better)
Translates to: CALPEDATLLQWSTYVFRKRALT*SVYKSL
Trigger: TAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTT...TCTAAAAACGTAAGTACTCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp CTCCTCATAAACATGACAAAAACAGGACCCATGTCTACAATGAGAAAAACAGCACACACCTACGTTCTGTaGCTATTTGTTGTTTTTGGC +
Preference number: 4 (lower is better)
Translates to: LLINMTKTGPMSTMRKTAHTYVL*LFVVFG
Trigger: GCCAAAAACAACAAATAGCCACAGAACGTAGGTGTG...TGCTGTTTTTCTCATTGTAGACATGGGTCCTGTTTTTGTCATGTTTATGAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR TCA 90 bp TCCACTGAGTTATCAACGGGTATTGTAGAGACATTCAAAGTTAGTGTTACTTGCCTCAGACTTTTTGGATaGGACAGATACTTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: STELSTGIVETFKVSVTCLRLFG*DRYFSL
Trigger: CAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGAG...GCAAGTAACACTAACTTTGAATGTCTCTACAATACCCGTTGATAACTCAGTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR TCA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCAAGTCTTTACTTTGGGTaGCTGCTTATTGAACCAGAG +
Preference number: 4 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSSLYFG*LLIEPE
Trigger: CTCTGGTTCAATAAGCAGTCACCCAAAGTAAAGACT...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATCATCATAAAGCACATTaGACAAGTTGTGTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNHHKAH*TSCVPC
Trigger: ACAAGGAACACAACTTGTTCAATGTGCTTTATGATG...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677895.1
CDS-3UTR GCA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCACAGAAAGGGGACTCTaGTTGATGCTAAATTCCATC +
Preference number: 4 (lower is better)
Translates to: TGNSNVLRLECITIILRFTERGL*LMLNSI
Trigger: GATGGAATTTAGCATCAAGCAGAGTCCCCTTTCTGT...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCTACGTGATACTGGCGTaGACTCTTTTTCTGACCTTT +
Preference number: 4 (lower is better)
Translates to: TGNSNVLRLECITIILRFYVILA*TLFLTF
Trigger: AAAGGTCAGAAAAAGAGTGCACGCCAGTATCACGTA...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398261.6
ENST00000503128.5
CDS-3UTR GCA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGATACGTGATACTGGCGTaGACTCTTTTTCTGACCTTT +
Preference number: 4 (lower is better)
Translates to: FLKILYAWMVSMLQNITRYVILA*TLFLTF
Trigger: AAAGGTCAGAAAAAGAGTGCACGCCAGTATCACGTA...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398261.6
ENST00000503128.5
CDS-3UTR GCA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGATTCTCTTCATGGGAATaGACTCTTCTCTCACAGACT +
Preference number: 4 (lower is better)
Translates to: FLKILYAWMVSMLQNITRFSSWE*TLLSQT
Trigger: AGTCTGTGAGAGAAGAGTGCATTCCCATGAAGAGAA...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp CATATAAGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTATTCTCTTCATGGGAATaGACTCTTCTCTCACAGACT +
Preference number: 4 (lower is better)
Translates to: HIRNMMHTMGSMHHLQNVFSSWE*TLLSQT
Trigger: AGTCTGTGAGAGAAGAGTGCATTCCCATGAAGAGAA...TACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCTTATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR GCA 90 bp GAAAAACACAGGGAATTCTCCAATCTCGTGCTTCATTTTCTGAATATTTGGGGGCTTCAGTGGTTTACATaGATCAGACAGATTTTTCGT +
Preference number: 4 (lower is better)
Translates to: EKHREFSNLVLHFLNIWGLQWFT*IRQIFR
Trigger: ACGAAAAATCTGTCTGATGCATGTAAACCACTGAAG...CCCCCAAATATTCAGAAAATGAAGCACGAGATTGGAGAATTCCCTGTGTTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR GCA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGATTACATCATTCTAAGTaGAGTACAGAGCAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: FLKILYAWMVSMLQNITRLHHSK*STEQLG
Trigger: ACCCAGCTGCTCTGTACTGCACTTAGAATGATGTAA...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TCTGCCTTTCACGACATGAAAGGTTGTGTCATGAAACCTCGCTTAAGTTTCCTAGAGGACCACTTTTCATaGCAAAGCAAAATTTATACT +
Preference number: 4 (lower is better)
Translates to: SAFHDMKGCVMKPRLSFLEDHFS*QSKIYT
Trigger: AGTATAAATTTTGCTTTGGCATGAAAAGTGGTCCTC...TAGGAAACTTAAGCGAGGTTTCATGACACAACCTTTCATGTCGTGAAAGGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGATTTACTTTGGGTGACTaGTTATTGAACCAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGFTLGD*LLNQSH
Trigger: ATGGCTCTGGTTCAATAAGCAGTCACCCAAAGTAAA...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAATCCCTCATTTGGAAATaGTTATACTGGCTTCCATGC +
Preference number: 4 (lower is better)
Translates to: STTSTIYSISNEMHLERKSLIWK*LYWLPC
Trigger: GCATGGAAGCCAGTATAAGCATTTCCAAATGAGGGA...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTTACCCGAGAGTTATATaGAAAAAGGCCAACAACTAT +
Preference number: 4 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTYPRVI*KKANNY
Trigger: ATAGTTGTTGGCCTTTTTGCATATAACTCTCGGGTA...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp CATATAAGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGCTACACTGGCCTCATaGATTACTCTAAATCAAAGC +
Preference number: 4 (lower is better)
Translates to: HIRNMMHTMGSMHHLQNVATLAS*ITLNQS
Trigger: GCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGC...TACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCTTATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CCA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCAGTCTCTTCCAGTGTTTaGACAAGACTCTTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSVSSSV*TRLFLS
Trigger: GCTAAGAAAGAGTCTTGTCCAAACACTGGAAGAGAC...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GGACTTTTCAAGATGATATTACCAAACATAACGGAACCTAGTGAACACATTCCAGTCTCTTCCAGTGTTTaGACAAGACTCTTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: GLFKMILPNITEPSEHIPVSSSV*TRLFLS
Trigger: GCTAAGAAAGAGTCTTGTCCAAACACTGGAAGAGAC...TGGAATGTGTTCACTAGGTTCCGTTATGTTTGGTAATATCATCTTGAAAAGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AAACAGTCATCAACTACACTCATAGGATCAAGATATTTGGCAACTGACAGTCATCTATTTTCCCCCAACTaGCAAGTCTCAACTCTCTAT +
Preference number: 4 (lower is better)
Translates to: KQSSTTLIGSRYLATDSHLFSPN*QVSTLY
Trigger: ATAGAGAGTTGAGACTTGCCAGTTGGGGGAAAATAG...ATGACTGTCAGTTGCCAAATATCTTGATCCTATGAGTGTAGTTGATGACTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAATCTTTGGACACCATTTaGTCATTTGCAGGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: STTSTIYSISNEMHLERKSLDTI*SFAGFC
Trigger: GCAAAACCCTGCAAATGACCAAATGGTGTCCAAAGA...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp GGACTTTTCAAGATGATATTACCAAACATAACGGAACCTAGTGAACACATTCCATGTCATGCTGCTCTTTaGACACCATTTGGTCATTTG +
Preference number: 4 (lower is better)
Translates to: GLFKMILPNITEPSEHIPCHAAL*TPFGHL
Trigger: CAAATGACCAAATGGTGTCCAAAGAGCAGCATGACA...TGGAATGTGTTCACTAGGTTCCGTTATGTTTGGTAATATCATCTTGAAAAGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TGCTCTATAGAAGCAACTGATGCAGAGGTTGGTGTACATAACCTGATTACAGTAGCCACCCTATTACAATaGAGTACTTACGTTTTTAGA +
Preference number: 4 (lower is better)
Translates to: CSIEATDAEVGVHNLITVATLLQ*STYVFR
Trigger: TCTAAAAACGTAAGTACTCCATTGTAATAGGGTGGC...TACTGTAATCAGGTTATGTACACCAACCTCTGCATCAGTTGCTTCTATAGAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TATTACATCATTCTAAGTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACTACTATATGCCTGGATaGTCAGCATGCTTCAAAATA +
Preference number: 4 (lower is better)
Translates to: YYIILSAVQSSWVQIQLDYYMPG*SACFKI
Trigger: TATTTTGAAGCATGCTGACCATCCAGGCATATAGTA...GTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCACTTAGAATGATGTAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR TCA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCCGGATTAAATGGCCTTaGTTAGTTATCTTACCTTGG +
Preference number: 4 (lower is better)
Translates to: TGNSNVLRLECITIILRFRIKWP*LVILPW
Trigger: CCAAGGTAAGATAACTAATCAAGGCCATTTAATCCG...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp GGACTTTTCAAGATGATATTACCAAACATAACGGAACCTAGTGAACACATTCCAAGGATTTCTGGTGCCTaGTTCATCTTTATGCACTTT +
Preference number: 4 (lower is better)
Translates to: GLFKMILPNITEPSEHIPRISGA*FIFMHF
Trigger: AAAGTGCATAAAGATGAAGCAGGCACCAGAAATCCT...TGGAATGTGTTCACTAGGTTCCGTTATGTTTGGTAATATCATCTTGAAAAGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGATTCACCTCTAGTGAATaGCTCAAGTTTTACACTGGA +
Preference number: 4 (lower is better)
Translates to: FLKILYAWMVSMLQNITRFTSSE*LKFYTG
Trigger: TCCAGTGTAAAACTTGAGGCATTCACTAGAGGTGAA...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCACCATATCCAACGAGATaGATTTGGAAAGGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSPYPTR*IWKGKV
Trigger: CACTTTTCCTTTCCAAATGCATCTCGTTGGATATGG...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCCCATATCCAACGAGATaGATTTGGAAAGGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: TGNSNVLRLECITIILRFPYPTR*IWKGKV
Trigger: CACTTTTCCTTTCCAAATGCATCTCGTTGGATATGG...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAAAAAAGGGCTCTCACCTaGTCTGTATACAAAAGTCTA +
Preference number: 4 (lower is better)
Translates to: STTSTIYSISNEMHLERKKRALT*SVYKSL
Trigger: TAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTT...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR TCA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCTTGACCACTGGAATATaGACGTGTTTCTATTATGAG +
Preference number: 4 (lower is better)
Translates to: TGNSNVLRLECITIILRFLTTGI*TCFYYE
Trigger: CTCATAATAGAAACACGTTCATATTCCAGTGGTCAA...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGACTTCAGTGGTTTACATaGATCAGACAGATTTTTCGT +
Preference number: 4 (lower is better)
Translates to: FLKILYAWMVSMLQNITRLQWFT*IRQIFR
Trigger: ACGAAAAATCTGTCTGATGCATGTAAACCACTGAAG...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCAGAAATGAAGCAAGTTaGCAAAGTCATAACGACCTT +
Preference number: 4 (lower is better)
Translates to: TGNSNVLRLECITIILRFRNEAS*QSHNDL
Trigger: AAGGTCGTTATGACTTTGGCAACTTGCTTCATTTCT...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAATCTACATTGACCACTaGAATATGAACGTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGIYIDH*NMNVFL
Trigger: TAGAAACACGTTCATATTCCAGTGGTCAATGTAGAT...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCAGCCACCCTATTACAATaGAGTACTTACGTTTTTAGA +
Preference number: 4 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSATLLQ*STYVFR
Trigger: TCTAAAAACGTAAGTACTCCATTGTAATAGGGTGGC...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCAAGATGTAACTACACCTaGAGTCAGTATGCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSRCNYT*SQYAEK
Trigger: TTTTTCAGCATACTGACTCCAGGTGTAGTTACATCT...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCAGACTTTTCCCTCATTTaGAAATGCTTATACTGGCTT +
Preference number: 4 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSDFSLI*KCLYWL
Trigger: AAGCCAGTATAAGCATTTCCAAATGAGGGAAAAGTC...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCTACTATATGCCTGGATaGTCAGCATGCTTCAAAATA +
Preference number: 4 (lower is better)
Translates to: TGNSNVLRLECITIILRFYYMPG*SACFKI
Trigger: TATTTTGAAGCATGCTGACCATCCAGGCATATAGTA...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CCA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAAAAACTAGAAACTTCCTaGCTATCCCTAAATTCTAGG +
Preference number: 4 (lower is better)
Translates to: STTSTIYSISNEMHLERKKLETS*LSLNSR
Trigger: CCTAGAATTTAGGGATAGCCAGGAAGTTTCTAGTTT...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGACCTAAGCATCTTACATaGGTTACATTACTTAATGGT +
Preference number: 4 (lower is better)
Translates to: FLKILYAWMVSMLQNITRPKHLT*VTLLNG
Trigger: ACCATTAAGTAATGTAACGCATGTAAGATGCTTAGG...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR GCA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGAGAGGACCACTTTTCATaGCAAAGCAAAATTTATACT +
Preference number: 4 (lower is better)
Translates to: FLKILYAWMVSMLQNITREDHFS*QSKIYT
Trigger: AGTATAAATTTTGCTTTGGCATGAAAAGTGGTCCTC...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp GACGCAGCGGACGCTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGTTCCCGAAGGGCCGCTaGCCAAGGCCCAGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: DAADAAEDGSVVGRRSLPFPKGR*PRPRQD
Trigger: GTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGAA...CGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCTTTCTGATGTCCCTCTaGGCGACCAGGCCCCACCCT +
Preference number: 5 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGFLMSL*ATRPHP
Trigger: AGGGTGGGGCCTGGTCGCCAAGAGGGACATCAGAAA...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTGCCGCCTGGCGCTATTaGCCCTCTGTGACTCTCCGC +
Preference number: 5 (lower is better)
Translates to: TYEARTPARQASTPRTAPAAWRY*PSVTLR
Trigger: GCGGAGAGTCACAGAGGGCAAATAGCGCCAGGCGGC...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS GCA 90 bp GTTGGAGACCAGACTGGGCAACATGGTGATGGCGAGACCCATCTCTaGGGTGCGTCGCATCCTCGGCGGGCGGCTCTCCGGAGCGGCAGG +
Preference number: 5 (lower is better)
Translates to: VGDQTGQHGDGETHL*GASHPRRAALRSGR
Trigger: CCTGCCGCTCCGGAGAGCCGCCCGCCGAGGATGCGACGCACCGCAGAGATGGGTCTCGCCATCACCATGTTGCCCAGTCTGGTCTCCAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507820.5
CDS-3UTR CAA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGCTCGGAGTCTTCCCGTaGGCACTGCCGAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: LAARAGSSGPVHARPLPQLGVFP*ALPRIS
Trigger: AGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGAG...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGCCAGCCCTGCAGTCATaGCAGAACCAGCTGCCGTCA +
Preference number: 5 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWPALQS*QNQLPS
Trigger: TGACGGCAGCTGGTTCTGCAATGACTGCAGGGCTGG...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGTTGTATGGTGGGGGCTaGCGCTCGCTCTCCTGTGTT +
Preference number: 5 (lower is better)
Translates to: LAARAGSSGPVHARPLPQLYGGG*RSLSCV
Trigger: AACACAGGAGAGCGAGCGCAAGCCCCCACCATACAA...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATTTCCCGAAGGGCCGCTaGCCAAGGCCCAGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDFPKGR*PRPRQD
Trigger: GTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGAA...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp CAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCCCACGCTCGGAGTCTTCCCGTaGGCACTGCCGAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: QCSGRRGTLQGHTPLNPTLGVFP*ALPRIS
Trigger: AGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGAG...CGTGGGGTTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGTTGTATGGTGGGGGCTaGCGCTCGCTCTCCTGTGTT +
Preference number: 5 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWLYGGG*RSLSCV
Trigger: AACACAGGAGAGCGAGCGCAAGCCCCCACCATACAA...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS GCA 90 bp GGAGACTCCTTGGGCCCGGTGAGTAGGCAGGAAGGGCCACGGCTGTaGAGGTGTCCTCTCATCATCCTCACAGACCCCAGACTGTGCCGG +
Preference number: 5 (lower is better)
Translates to: GDSLGPVSRQEGPRL*RCPLIILTDPRLCR
Trigger: CCGGCACAGTCTGGGGTCTGTGAGGATGATGAGAGGACACCTGCACAGCCGTGGCCCTTCCTGCCTACTCACCGGGCCCAAGGAGTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382888.3
CDS CCA 90 bp CACAGCAGGGAACTTGCTCCCACCTGTCCCGGCAACAAGCCAGCCTaGAGGAAGCCGCTGTTCACGGGGGACACAGGTCTCCAGGAGTGC +
Preference number: 5 (lower is better)
Translates to: HSRELAPTCPGNKPA*RKPLFTGDTGLQEC
Trigger: GCACTCCTGGAGACCTGTGTCCCCCGTGAACAGCGGCTTCCTCCAGGCTGGCTTGTTGCCGGGACAGGTGGGAGCAAGTTCCCTGCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515695.1
CDS-3UTR CAA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTCTGGAGAGCTGGGCTTaGCTGAGGAACACAGAACAC +
Preference number: 5 (lower is better)
Translates to: TYEARTPARQASTPRTAPLESWA*LRNTEH
Trigger: GTGTTCTGTGTTCCTCAGCAAAGCCCAGCTCTCCAG...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGCTTGGGTTTGAAGGGTaGGAAGCATGGCAGCTCACA +
Preference number: 5 (lower is better)
Translates to: LAARAGSSGPVHARPLPQLGFEG*EAWQLT
Trigger: TGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAAG...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GACGCAGCGGACGCTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGCTTGGGTTTGAAGGGTaGGAAGCATGGCAGCTCACA +
Preference number: 5 (lower is better)
Translates to: DAADAAEDGSVVGRRSLPLGFEG*EAWQLT
Trigger: TGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAAG...CGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATAAGCACCAGCTCACGTaGACGTGGGCGTGGTGTCGC +
Preference number: 5 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDKHQLT*TWAWCR
Trigger: GCGACACCACGCCCACGTCAACGTGAGCTGGTGCTT...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp ACTTCCCGAAGGGCCGCTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGGCCTTGGTGCAGAACTaGCGGTCACACAGCACCAGC +
Preference number: 5 (lower is better)
Translates to: TSRRAACQGPGRTGGRPWALVQN*RSHSTS
Trigger: GCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGGC...CCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGAAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGGCCGCCTGGCGCTATTaGCCCTCTGTGACTCTCCGC +
Preference number: 5 (lower is better)
Translates to: KHCEGDPASHGRVSPEERAAWRY*PSVTLR
Trigger: GCGGAGAGTCACAGAGGGCAAATAGCGCCAGGCGGC...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS TCA 90 bp GATGCCCGCGCAACAGGGCTATGCGGCCCGAGATGTCCACAGTACTaGGGTGGAGGACACCTGACGTGCAGCAATAGGGGGCTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: DARATGLCGPRCPQY*GGGHLTCSNRGLLV
Trigger: CACCAGCAGCCCCCTATTGCTGCACGTCAGGTGTCCTCCACCTCAGTACTGTGGACATCTCGGGCCGCATAGCCCTGTTGCGCGGGCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
ENST00000420906.6
ENST00000503128.5
CDS-3UTR CAA 90 bp CCAGGGAGACTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGCTCGGAGTCTTCCCGTaGGCACTGCCGAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: PGRLSSPDSWAGLDPATLLGVFP*ALPRIS
Trigger: AGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGAG...CAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CAA 90 bp GGGAGACTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGGCCCTGGAGAGCTGGGCTTaGCTGAGGAACACAGAACAC +
Preference number: 5 (lower is better)
Translates to: GRLSSPDSWAGLDPATLALESWA*LRNTEH
Trigger: GTGTTCTGTGTTCCTCAGCAAAGCCCAGCTCTCCAG...GGCCAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CAA 90 bp CTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGGCCTCATGCGACTCAAAACGCAGTTaGGCATCGTGTGCGCCGGGT +
Preference number: 5 (lower is better)
Translates to: LSSPDSWAGLDPATLASCDSKRS*ASCAPG
Trigger: ACCCGGCGCACACGATGCCAAACTGCGTTTTGAGTC...GCATGAGGCCAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CAA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGAGCCTCCTTGGCTACTaGAGGGTTGAGATGAAGCTG +
Preference number: 5 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAESLLGY*RVEMKL
Trigger: CAGCTTCATCTCAACCCTCAAGTAGCCAAGGAGGCT...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGTTCCGAAGACTGTGCTaGTCCGTCCTGAGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: LAARAGSSGPVHARPLPQFRRLC*SVLSLF
Trigger: GAAAAGACTCAGGACGGACAAGCACAGTCTTCGGAA...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CACCGCCCCTGGATCCGGCCAAGCGGCCGCCTGGCGCTATTTGCCCTCTGTGACGTGCAGATGATGCTGTaGGAGGCGATCACTGAGCAT +
Preference number: 5 (lower is better)
Translates to: HRPWIRPSGRLALFALCDVQMML*EAITEH
Trigger: ATGCTCAGTGATCGCCTCCAACAGCATCATCTGCAC...GTCACAGAGGGCAAATAGCGCCAGGCGGCCGCTTGGCCGGATCCAGGGGCGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCTTTGGGGGAACATTTTaGGGATGGCAAACTTCTGCC +
Preference number: 5 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGFGGTF*GWQTSA
Trigger: GGCAGAAGTTTGCCATCCCAAAAATGTTCCCCCAAA...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACTTCACCTTGATGTGCTaGTATGGTGGGGGCTTGCGC +
Preference number: 5 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYFTLMC*YGGGLR
Trigger: GCGCAAGCCCCCACCATACAAGCACATCAAGGTGAA...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCTCTGTGGGCTTGCAGTaGCACTTAGGGATTTCTGAA +
Preference number: 5 (lower is better)
Translates to: GGSSWVLRASSCSPSPAGSVGLQ*HLGISE
Trigger: TTCAGAAATCCCTAAGTGCAACTGCAAGCCCACAGA...GCCTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CACCGCCCCTGGATCCGGCCAAGCGGCCGCCTGGCGCTATTTGCCCTCTGTGACTCTGTCTTGATGATCTaGGTCTCTGGGTACTGGCGC +
Preference number: 5 (lower is better)
Translates to: HRPWIRPSGRLALFALCDSVLMI*VSGYWR
Trigger: GCGCCAGTACCCAGAGACCAAGATCATCAAGACAGA...GTCACAGAGGGCAAATAGCGCCAGGCGGCCGCTTGGCCGGATCCAGGGGCGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAAGCCTTGGTGCAGAACTaGCGGTCACACAGCACCAGC +
Preference number: 5 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEALVQN*RSHSTS
Trigger: GCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGGC...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS TCA 90 bp GGCTATGCGGCCCGAGATGTCCACAGTACTGAGGTGGAGGACACCTaGCGTGCAGCAATAGGGGGCTGCTGGTGTCTGCAACCCGCAGTC +
Preference number: 5 (lower is better)
Translates to: GYAARDVHSTEVEDT*RAAIGGCWCLQPAV
Trigger: GACTGCGGGTTGCAGACACCAGCAGCCCCCTATTGCTGCACGTCAGGTGTCCTCCACCTCAGTACTGTGGACATCTCGGGCCGCATAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
ENST00000420906.6
ENST00000503128.5
CDS-3UTR CAA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGCTCGGAGTCTTCCCGTaGGCACTGCCGAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKLGVFP*ALPRIS
Trigger: AGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGAG...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp AGCTGCCCGCCATCACCGCAGCGGAAGCACTCGTCCTCTGACTGCCTCTTCCCTGACTCAAAACGCAGTTaGGCATCGTGTGCGCCGGGT +
Preference number: 5 (lower is better)
Translates to: SCPPSPQRKHSSSDCLFPDSKRS*ASCAPG
Trigger: ACCCGGCGCACACGATGCCAAACTGCGTTTTGAGTC...AGGGAAGAGGCAGTCAGAGGACGAGTGCTTCCGCTGCGGTGATGGCGGGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCGACTCAAAACGCAGTTaGGCATCGTGTGCGCCGGGT +
Preference number: 5 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPDSKRS*ASCAPG
Trigger: ACCCGGCGCACACGATGCCAAACTGCGTTTTGAGTC...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGAGACCTGCAGAGCTACACAGTTaGGCCCTCCGCCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: LHFRMGTPRARLPGCPRPAELHS*ALRLLF
Trigger: GAAGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTGC...AGGTCTCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CAA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATGCAGAGCTACACAGTTaGGCCCTCCGCCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDAELHS*ALRLLF
Trigger: GAAGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTGC...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAAGCAGAGCTACACAGTTaGGCCCTCCGCCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEAELHS*ALRLLF
Trigger: GAAGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTGC...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGTTCCGAAGACTGTGCTaGTCCGTCCTGAGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAEFRRLC*SVLSLF
Trigger: GAAAAGACTCAGGACGGACAAGCACAGTCTTCGGAA...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGTGGCCTTGTAAGAGCTaGTTCTGGCCGTTTTGTCAG +
Preference number: 5 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWWPCKS*FWPFCQ
Trigger: CTGACAAAACGGCCAGAACAAGCTCTTACAAGGCCA...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp ACTTCCCGAAGGGCCGCTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGGGGTTCAAATCCAACTaGACTGGTGTGGGCTCCCAC +
Preference number: 5 (lower is better)
Translates to: TSRRAACQGPGRTGGRPWGFKSN*TGVGSH
Trigger: GTGGGAGCCCACACCAGTCAAGTTGGATTTGAACCC...CCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CAA 90 bp GCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTGTGCAGATGATGCTGTaGGAGGCGATCACTGAGCAT +
Preference number: 5 (lower is better)
Translates to: AEDGSVVGRRSLPRRPVRVQMML*EAITEH
Trigger: ATGCTCAGTGATCGCCTCCAACAGCATCATCTGCAC...ACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTTCTGTCTTGATGATCTaGGTCTCTGGGTACTGGCGC +
Preference number: 5 (lower is better)
Translates to: AEDGSVVGRRSLPRRPVRSVLMI*VSGYWR
Trigger: GCGCCAGTACCCAGAGACCAAGATCATCAAGACAGA...ACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGTTTCTGATGTCCCTCTaGGCGACCAGGCCCCACCCT +
Preference number: 5 (lower is better)
Translates to: KHCEGDPASHGRVSPEERFLMSL*ATRPHP
Trigger: AGGGTGGGGCCTGGTCGCCAAGAGGGACATCAGAAA...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CGGAAGAAAGGCCGGCCTGAGGACGGACAGCTGGGTTCTCACTTCAGGTGCCTGTTTCTGATGTCCCTCTaGGCGACCAGGCCCCACCCT +
Preference number: 5 (lower is better)
Translates to: RKKGRPEDGQLGSHFRCLFLMSL*ATRPHP
Trigger: AGGGTGGGGCCTGGTCGCCAAGAGGGACATCAGAAA...CAGGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp TCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGAGACCAGGAATCCACTGCAATaGGAGGCTCCACACCGGCAG +
Preference number: 5 (lower is better)
Translates to: SALSYGDSEGSSPGLSETRNPLQ*EAPHRQ
Trigger: CTGCCGGTGTGGAGCCTCCAATTGCAGTGGATTCCT...GGTCTCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CAA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGAGGAATCCACTGCAATaGGAGGCTCCACACCGGCAG +
Preference number: 5 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGRNPLQ*EAPHRQ
Trigger: CTGCCGGTGTGGAGCCTCCAATTGCAGTGGATTCCT...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTAGGAATCCACTGCAATaGGAGGCTCCACACCGGCAG +
Preference number: 5 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPRNPLQ*EAPHRQ
Trigger: CTGCCGGTGTGGAGCCTCCAATTGCAGTGGATTCCT...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp TCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGAGGGGTCGTCGAGGTCTTaGGTCTATCCCCGAGGAATC +
Preference number: 5 (lower is better)
Translates to: SSALSYGDSEGSSPGLSEGSSRS*VYPRGI
Trigger: GATTCCTCGGGGATAGACCAAAGACCTCGACGACCC...CTCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CAA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGATTCCCGAAGGGCCGCTaGCCAAGGCCCAGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRFPKGR*PRPRQD
Trigger: GTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGAA...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCATTCCCGAAGGGCCGCTaGCCAAGGCCCAGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: CGDTARPVPRTTFQVRASFPKGR*PRPRQD
Trigger: GTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGAA...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGGGGGGCTTCTCAGTCTaGGTGCTTCTGACCGATGCC +
Preference number: 5 (lower is better)
Translates to: KHCEGDPASHGRVSPEERGGFSV*VLLTDA
Trigger: GGCATCGGTCAGAAGCACCAAGACTGAGAAGCCCCC...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp GGACAGGTGGTAGGCCTTGGTGCAGAACTTGCGGTCACACAGCACCAGCTGCCCAGGCAGGAGGACAGCTaGAGCCCGAGAGGACAGCTT +
Preference number: 5 (lower is better)
Translates to: GQVVGLGAELAVTQHQLPRQEDS*SPRGQL
Trigger: AAGCTGTCCTCTCGGGCTCAAGCTGTCCTCCTGCCT...GGGCAGCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677559.1
CDS GCA 90 bp GGCAGGCAGACAGACACTCCCATAAGTGAGGTGCTGCTGTGGGGCTaGCATGGCCTGGGAGACTCTCCAGGTGTCTTCCTGACCCAGGAA +
Preference number: 5 (lower is better)
Translates to: GRQTDTPISEVLLWG*HGLGDSPGVFLTQE
Trigger: TTCCTGGGTCAGGAAGACACCTGGAGAGTCTCCCAGGCCATGGCAGCCCCACAGCAGCACCTCACTTATGGGAGTGTCTGTCTGCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382888.3
CDS-3UTR CAA 90 bp AACAGGGCCACCCCTTCCGTGCAAAGCCCTGCTGCAGCTCTGGACAGCCCCCAACTGGAGAGCTGGGCTTaGCTGAGGAACACAGAACAC +
Preference number: 5 (lower is better)
Translates to: NRATPSVQSPAAALDSPQLESWA*LRNTEH
Trigger: GTGTTCTGTGTTCCTCAGCAAAGCCCAGCTCTCCAG...TTGGGGGCTGTCCAGAGCTGCAGCAGGGCTTTGCACGGAAGGGGTGGCCCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp CGGAAGAAAGGCCGGCCTGAGGACGGACAGCTGGGTTCTCACTTCAGGTGCCTGGACTCAAAACGCAGTTaGGCATCGTGTGCGCCGGGT +
Preference number: 5 (lower is better)
Translates to: RKKGRPEDGQLGSHFRCLDSKRS*ASCAPG
Trigger: ACCCGGCGCACACGATGCCAAACTGCGTTTTGAGTC...CAGGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GACGCAGCGGACGCTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGCTGTTCCTTCTCGCCTaGTTTTCTGGTTTTTGTCCA +
Preference number: 5 (lower is better)
Translates to: DAADAAEDGSVVGRRSLPLFLLA*FSGFCP
Trigger: TGGACAAAAACCAGAAAACAAGGCGAGAAGGAACAG...CGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAGCGTCCGCTGCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CCAGGGAGACTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGAGCCTCCTTGGCTACTaGAGGGTTGAGATGAAGCTG +
Preference number: 5 (lower is better)
Translates to: PGRLSSPDSWAGLDPATLSLLGY*RVEMKL
Trigger: CAGCTTCATCTCAACCCTCAAGTAGCCAAGGAGGCT...CAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CAA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGTCTTCTCTCACAGACTaGGGGTTTTCAGCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWSSLTD*GFSAAS
Trigger: AGAAGCTGCTGAAAACCCCAAGTCTGTGAGAGAAGA...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACTACCTTTTGACGGCCTaGGGTTTGAAGGGTTGGAAG +
Preference number: 5 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYYLLTA*GLKGWK
Trigger: CTTCCAACCCTTCAAACCCAAGGCCGTCAAAAGGTA...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
CDS-3UTR CAA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGGCATCATTTTACCTTTaGACGGCCTTGGGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: LAARAGSSGPVHARPLPQASFYL*TALGLK
Trigger: CTTCAAACCCAAGGCCGTCAAAAGGTAAAATGATGC...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
CDS-3UTR CAA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTAAAGCACCAGCTCACGTaGACGTGGGCGTGGTGTCGC +
Preference number: 5 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVKHQLT*TWAWCR
Trigger: GCGACACCACGCCCACGTCAACGTGAGCTGGTGCTT...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCCCACGACGAGCTTCAGCTTCTaGCAGTGCGTTTTTGAAGAC +
Preference number: 5 (lower is better)
Translates to: QCSGRRGTLQGHTPLNPTTSFSF*QCVFED
Trigger: GTCTTCAAAAACGCACTGCAAGAAGCTGAAGCTCGT...CGTGGGGTTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGTCTGTGGGCTTGCAGTaGCACTTAGGGATTTCTGAA +
Preference number: 5 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAESVGLQ*HLGISE
Trigger: TTCAGAAATCCCTAAGTGCAACTGCAAGCCCACAGA...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GGACAGGTGGTAGGCCTTGGTGCAGAACTTGCGGTCACACAGCACCAGCTGCCCAGGAATCCACTGCAATaGGAGGCTCCACACCGGCAG +
Preference number: 5 (lower is better)
Translates to: GQVVGLGAELAVTQHQLPRNPLQ*EAPHRQ
Trigger: CTGCCGGTGTGGAGCCTCCAATTGCAGTGGATTCCT...GGGCAGCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp GGACAGGTGGTAGGCCTTGGTGCAGAACTTGCGGTCACACAGCACCAGCTGCCCGGGTCGTCGAGGTCTTaGGTCTATCCCCGAGGAATC +
Preference number: 5 (lower is better)
Translates to: GQVVGLGAELAVTQHQLPGSSRS*VYPRGI
Trigger: GATTCCTCGGGGATAGACCAAAGACCTCGACGACCC...GGGCAGCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGGCCTTGGTGCAGAACTaGCGGTCACACAGCACCAGC +
Preference number: 5 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLALVQN*RSHSTS
Trigger: GCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGGC...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGTTCCCGAAGGGCCGCTaGCCAAGGCCCAGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGFPKGR*PRPRQD
Trigger: GTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGAA...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGGGGGGCTTCTCAGTCTaGGTGCTTCTGACCGATGCC +
Preference number: 5 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWGGFSV*VLLTDA
Trigger: GGCATCGGTCAGAAGCACCAAGACTGAGAAGCCCCC...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
61% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGCCGCCTGGCGCTATTaGCCCTCTGTGACTCTCCGC +
Preference number: 5 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYAAWRY*PSVTLR
Trigger: GCGGAGAGTCACAGAGGGCAAATAGCGCCAGGCGGC...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTGAGTGGGAGGGAACCTaGACATTCGGAGAAATTCAA +
Preference number: 5 (lower is better)
Translates to: TYEARTPARQASTPRTAPEWEGT*TFGEIQ
Trigger: TTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTC...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp CAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCCCACGGAGTGGGAGGGAACCTaGACATTCGGAGAAATTCAA +
Preference number: 5 (lower is better)
Translates to: QCSGRRGTLQGHTPLNPTEWEGT*TFGEIQ
Trigger: TTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTC...CGTGGGGTTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS CCA 90 bp GACCTCGTCTCTTTTGACGGCCTTGGGTTTGAAGGGTTGGAAGCATaGCAGCTCACACAGCTGTGGAGGGGGCAGCGGAAACCTCGGCTC +
Preference number: 5 (lower is better)
Translates to: DLVSFDGLGFEGLEA*QLTQLWRGQRKPRL
Trigger: GAGCCGAGGTTTCCGCTGCCCCCTCCACAGCTGTGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAAGGCCGTCAAAAGAGACGAGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505643.5
CDS-3UTR CAA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGAAAGGGGACTCTGCTaGATGCTAAATTCCATCCAG +
Preference number: 5 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYERGLC*MLNSIQ
Trigger: CTGGATGGAATTTAGCATCAAGCAGAGTCCCCTTTC...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGCTCGGAGTCTTCCCGTaGGCACTGCCGAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLLGVFP*ALPRIS
Trigger: AGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGAG...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCCCACGCTGTTCCTTCTCGCCTaGTTTTCTGGTTTTTGTCCA +
Preference number: 5 (lower is better)
Translates to: QCSGRRGTLQGHTPLNPTLFLLA*FSGFCP
Trigger: TGGACAAAAACCAGAAAACAAGGCGAGAAGGAACAG...CGTGGGGTTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCAGCCTCCTTGGCTACTaGAGGGTTGAGATGAAGCTG +
Preference number: 5 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPSLLGY*RVEMKL
Trigger: CAGCTTCATCTCAACCCTCAAGTAGCCAAGGAGGCT...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GGGAGACTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGGCCTCTTCTCTCACAGACTaGGGGTTTTCAGCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: GRLSSPDSWAGLDPATLASSLTD*GFSAAS
Trigger: AGAAGCTGCTGAAAACCCCAAGTCTGTGAGAGAAGA...GGCCAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CAA 90 bp GGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTGCAGAGCTACACAGTTaGGCCCTCCGCCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: GHVGKGTHGAPFSGCSRLAELHS*ALRLLF
Trigger: GAAGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTGC...AAGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGGCCTCATGCTTCCGAAGACTGTGCTaGTCCGTCCTGAGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: LSSPDSWAGLDPATLASCFRRLC*SVLSLF
Trigger: GAAAAGACTCAGGACGGACAAGCACAGTCTTCGGAA...GCATGAGGCCAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CAA 90 bp GTAGGACCGCCCGTCCGGGGTGCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTCTTGTTCTGGCCGTTTaGTCAGTGATTGTGTCTCTC +
Preference number: 5 (lower is better)
Translates to: VGPPVRGAAEGCPVLVLLLVLAV*SVIVSL
Trigger: GAGAGACACAATCACTGACAAAACGGCCAGAACAAG...AAGGAGCACCAGGACGGGACAGCCTTCAGCTGCACCCCGGACGGGCGGTCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGCCTCGCTCAGACTTTTaGGATGAGACAGATACTTCA +
Preference number: 5 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWPRSDF*DETDTS
Trigger: TGAAGTATCTGTCTCATCCAAAAAGTCTGAGCGAGG...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCTTGACGGCCTTGGGTTaGAAGGGTTGGAAGCATGGC +
Preference number: 5 (lower is better)
Translates to: VSSALSYGDSEGSSPGLSLTALG*KGWKHG
Trigger: GCCATGCTTCCAACCCTTCAAACCCAAGGCCGTCAA...GGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CAA 90 bp ACTTCCCGAAGGGCCGCTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGTACCTTTTGACGGCCTaGGGTTTGAAGGGTTGGAAG +
Preference number: 5 (lower is better)
Translates to: TSRRAACQGPGRTGGRPWYLLTA*GLKGWK
Trigger: CTTCCAACCCTTCAAACCCAAGGCCGTCAAAAGGTA...CCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CAA 90 bp GTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGAGACGTGCAGATGATGCTGTaGGAGGCGATCACTGAGCAT +
Preference number: 5 (lower is better)
Translates to: VCTFVWGLRGLVSRAVRDVQMML*EAITEH
Trigger: ATGCTCAGTGATCGCCTCCAACAGCATCATCTGCAC...GTCTCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CAA 90 bp CGGGGTGCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGTTGTATGGTGGGGGCTaGCGCTCGCTCTCCTGTGTT +
Preference number: 5 (lower is better)
Translates to: RGAAEGCPVLVLLTERIGLYGGG*RSLSCV
Trigger: AACACAGGAGAGCGAGCGCAAGCCCCCACCATACAA...CCCAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTTCAGCTGCACCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACTCTGTGGGCTTGCAGTaGCACTTAGGGATTTCTGAA +
Preference number: 5 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYSVGLQ*HLGISE
Trigger: TTCAGAAATCCCTAAGTGCAACTGCAAGCCCACAGA...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GAAAGCCCAAGGCAGGCGAGGTGGAAAGCTCCGCAGCAGGGTCCTTCACAGAGCTTCTCGTGTGCGTGCTaGATTCTCGCCATGCACTCC +
Preference number: 5 (lower is better)
Translates to: ESPRQARWKAPQQGPSQSFSCAC*ILAMHS
Trigger: GGAGTGCATGGCGAGAATCAAGCACGCACACGAGAA...GCTCTGTGAAGGACCCTGCTGCGGAGCTTTCCACCTCGCCTGCCTTGGGCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CAA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGTTCTCGTGTGCGTGCTaGATTCTCGCCATGCACTCC +
Preference number: 5 (lower is better)
Translates to: KHCEGDPASHGRVSPEERFSCAC*ILAMHS
Trigger: GGAGTGCATGGCGAGAATCAAGCACGCACACGAGAA...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTGGGTCGTCGAGGTCTTaGGTCTATCCCCGAGGAATC +
Preference number: 5 (lower is better)
Translates to: GHVGKGTHGAPFSGCSRLGSSRS*VYPRGI
Trigger: GATTCCTCGGGGATAGACCAAAGACCTCGACGACCC...AAGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGGGGTCGTCGAGGTCTTaGGTCTATCCCCGAGGAATC +
Preference number: 5 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWGSSRS*VYPRGI
Trigger: GATTCCTCGGGGATAGACCAAAGACCTCGACGACCC...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTAGGGGGCTTCTCAGTCTaGGTGCTTCTGACCGATGCC +
Preference number: 5 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVGGFSV*VLLTDA
Trigger: GGCATCGGTCAGAAGCACCAAGACTGAGAAGCCCCC...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACGCCGCCTGGCGCTATTaGCCCTCTGTGACTCTCCGC +
Preference number: 5 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDAAWRY*PSVTLR
Trigger: GCGGAGAGTCACAGAGGGCAAATAGCGCCAGGCGGC...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp CAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCCCACGCGCGTAAACTACACGTaGAAAGTGGACGTGTTATTG +
Preference number: 5 (lower is better)
Translates to: QCSGRRGTLQGHTPLNPTRVNYT*KVDVLL
Trigger: CAATAACACGTCCACTTTCAACGTGTAGTTTACGCG...CGTGGGGTTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp GCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTAGGAATCCTGAGGGATaGGGGCGGTTTTTGTGTTTT +
Preference number: 5 (lower is better)
Translates to: AEDGSVVGRRSLPRRPVRRNPEG*GRFLCF
Trigger: AAAACACAAAAACCGCCCCAATCCCTCAGGATTCCT...ACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGTCAAGAACTTTCCCGTaGTTTCCCGCGTCCACCACA +
Preference number: 5 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKSRTFP*FPASTT
Trigger: TGTGGTGGACGCGGGAAACAACGGGAAAGTTCTTGA...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS TCA 90 bp GCAGTCACTTATCATTCTGGGCAGGCAGACAGACACTCCCATAAGTaGGGTGCTGCTGTGGGGCTGCCATGGCCTGGGAGACTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: AVTYHSGQADRHSHK*GAAVGLPWPGRLSR
Trigger: CCTGGAGAGTCTCCCAGGCCATGGCAGCCCCACAGCAGCACCTCACTTATGGGAGTGTCTGTCTGCCTGCCCAGAATGATAAGTGACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382888.3
CDS GCA 90 bp TTGTCGGCTGGAATAAAGGGCAGGGCGTCGTGGCCGTTAAACTTCTaGATGACCCCCTCCTGCAGGCTACTGGAGAGCTGGGCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: LSAGIKGRASWPLNF*MTPSCRLLESWALL
Trigger: CAGCAAAGCCCAGCTCTCCAGTAGCCTGCAGGAGGGGGTCATGCAGAAGTTTAACGGCCACGACGCCCTGCCCTTTATTCCAGCCGACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000398261.6
ENST00000420906.6
ENST00000503128.5
ENST00000508355.5
ENST00000508803.6
ENST00000509115.5
ENST00000512700.2
ENST00000514045.5
ENST00000515806.1
ENST00000677559.1
ENST00000678714.1
CDS-3UTR CAA 90 bp ACTTCCCGAAGGGCCGCTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGGAAAGGGGACTCTGCTaGATGCTAAATTCCATCCAG +
Preference number: 5 (lower is better)
Translates to: TSRRAACQGPGRTGGRPWERGLC*MLNSIQ
Trigger: CTGGATGGAATTTAGCATCAAGCAGAGTCCCCTTTC...CCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp GGTGACTCTCCAGGGTCTCTGCAGAGCTACACAGTTTGGCCCTCCGCCTTCTCTCTCGGAGTCTTCCCGTaGGCACTGCCGAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: GDSPGSLQSYTVWPSAFSLGVFP*ALPRIS
Trigger: AGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGAG...AGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTGCAGAGACCCTGGAGAGTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR CAA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACCTGTTCCTTCTCGCCTaGTTTTCTGGTTTTTGTCCA +
Preference number: 5 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYLFLLA*FSGFCP
Trigger: TGGACAAAAACCAGAAAACAAGGCGAGAAGGAACAG...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GGTGACTCTCCAGGGTCTCTGCAGAGCTACACAGTTTGGCCCTCCGCCTTCTCTGCAGAGCTACACAGTTaGGCCCTCCGCCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: GDSPGSLQSYTVWPSAFSAELHS*ALRLLF
Trigger: GAAGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTGC...AGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTGCAGAGACCCTGGAGAGTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR CAA 90 bp AGCTGCCCGCCATCACCGCAGCGGAAGCACTCGTCCTCTGACTGCCTCTTCCCTTGGCCTTGTAAGAGCTaGTTCTGGCCGTTTTGTCAG +
Preference number: 5 (lower is better)
Translates to: SCPPSPQRKHSSSDCLFPWPCKS*FWPFCQ
Trigger: CTGACAAAACGGCCAGAACAAGCTCTTACAAGGCCA...AGGGAAGAGGCAGTCAGAGGACGAGTGCTTCCGCTGCGGTGATGGCGGGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTTGGCCTTGTAAGAGCTaGTTCTGGCCGTTTTGTCAG +
Preference number: 5 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPWPCKS*FWPFCQ
Trigger: CTGACAAAACGGCCAGAACAAGCTCTTACAAGGCCA...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGGAAGGAGATGAACTTTaGCTAAACCCAAGAGCTGAA +
Preference number: 5 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWEGDEL*LNPRAE
Trigger: TTCAGCTCTTGGGTTTAGCAAAAGTTCATCTCCTTC...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GCTATCAGACAGGAGCCTCTCCAGCGAGGGGAATCCGTGGCTTTACAGCCCTCCGGGTTCAAATCCAACTaGACTGGTGTGGGCTCCCAC +
Preference number: 5 (lower is better)
Translates to: AIRQEPLQRGESVALQPSGFKSN*TGVGSH
Trigger: GTGGGAGCCCACACCAGTCAAGTTGGATTTGAACCC...GGAGGGCTGTAAAGCCACGGATTCCCCTCGCTGGAGAGGCTCCTGTCTGATAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp CTGCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACCCTCGCTCAGACTTTTaGGATGAGACAGATACTTCA +
Preference number: 5 (lower is better)
Translates to: LLRMAQWWGGAPSRGGLYPRSDF*DETDTS
Trigger: TGAAGTATCTGTCTCATCCAAAAAGTCTGAGCGAGG...GTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCACACATACTCCTTTTaGGCAGTCACTCCTCGCTCA +
Preference number: 5 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPHTYSF*AVTPRS
Trigger: TGAGCGAGGAGTGACTGCCAAAAAGGAGTATGTGTG...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CGGAAGAAAGGCCGGCCTGAGGACGGACAGCTGGGTTCTCACTTCAGGTGCCTGCTTGGGTTTGAAGGGTaGGAAGCATGGCAGCTCACA +
Preference number: 5 (lower is better)
Translates to: RKKGRPEDGQLGSHFRCLLGFEG*EAWQLT
Trigger: TGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAAG...CAGGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTAAAGCACCAGCTCACGTaGACGTGGGCGTGGTGTCGC +
Preference number: 5 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLKHQLT*TWAWCR
Trigger: GCGACACCACGCCCACGTCAACGTGAGCTGGTGCTT...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp AGGACACGTGGGCAAAGGCACACATGGTGCCCCCTTCTCAGGGTGCTCCAGACTTTCACCTTGATGTGCTaGTATGGTGGGGGCTTGCGC +
Preference number: 5 (lower is better)
Translates to: RTRGQRHTWCPLLRVLQTFTLMC*YGGGLR
Trigger: GCGCAAGCCCCCACCATACAAGCACATCAAGGTGAA...AGTCTGGAGCACCCTGAGAAGGGGGCACCATGTGTGCCTTTGCCCACGTGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp AATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGTTCCCGAAGGGCCGCTaGCCAAGGCCCAGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: NKVVLEDGHCTRRGLDVKFPKGR*PRPRQD
Trigger: GTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGAA...CTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGTTCCCGAAGGGCCGCTaGCCAAGGCCCAGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSEFPKGR*PRPRQD
Trigger: GTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGAA...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp CTGGCGGCTCGAGCTGGGTCCTCCGGGCCAGTTCATGCTCGCCCTCTCCCGCAGATTAATGATGGAGGATaGAAGCTGATGTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: LAARAGSSGPVHARPLPQINDGG*KLMFRK
Trigger: CTTCCTGAACATCAGCTTCAATCCTCCATCATTAAT...CTGCGGGAGAGGGCGAGCATGAACTGGCCCGGAGGACCCAGCTCGAGCCGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp CACAGGAGCAGCAAGCTTGCTCCTGACAGCATGGCTCTCACACAGCATCCTCCCACAGGAGCAGCAAGCTaGCTCCTGACAGCATGGCTC +
Preference number: 5 (lower is better)
Translates to: HRSSKLAPDSMALTQHPPTGAAS*LLTAWL
Trigger: GAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGT...GGGAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp CCCTGCAGAAAATCCCACTCGGAGGAGTGGTCGCTGAGGATTCAGAGTGGCAAGGGGCCTGTCCAACCCTaGCCTCACTACCCTGTTCCA +
Preference number: 5 (lower is better)
Translates to: PCRKSHSEEWSLRIQSGKGPVQP*PHYPVP
Trigger: TGGAACAGGGTAGTGAGGCAAGGGTTGGACAGGCCC...CTTGCCACTCTGAATCCTCAGCGACCACTCCTCCGAGTGGGATTTTCTGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS CCA 90 bp GCCCAGATGCTTCCGTTCTTAGAACACTCTGATGGGTTGCGGTCATaGATGCTGCTGCATCTCCTGCAACGCACAGGATGCCCGCGCAAC +
Preference number: 5 (lower is better)
Translates to: AQMLPFLEHSDGLRS*MLLHLLQRTGCPRN
Trigger: GTTGCGCGGGCATCCTGTGCGTTGCAGGAGATGCAGCAGCATCCATGACCGCAACCCATCAGAGTGTTCTAAGAACGGAAGCATCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
ENST00000420906.6
ENST00000503128.5
CDS CCA 90 bp CCGTTAAACTTCTGCATGACCCCCTCCTGCAGGCTACTGGAGAGCTaGGCTTTGCTGAGGAACACAGAACACTCGCGGTTCACCTCGCAG +
Preference number: 5 (lower is better)
Translates to: PLNFCMTPSCRLLES*ALLRNTEHSRFTSQ
Trigger: CTGCGAGGTGAACCGCGAGTGTTCTGTGTTCCTCAGCAAAGCCCAGCTCTCCAGTAGCCTGCAGGAGGGGGTCATGCAGAAGTTTAACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000398261.6
ENST00000420906.6
ENST00000503128.5
ENST00000508355.5
ENST00000508803.6
ENST00000509115.5
ENST00000512700.2
ENST00000514045.5
ENST00000515806.1
ENST00000677559.1
ENST00000678714.1
CDS CCA 90 bp GACTCTATCTCTTTTGACGGCCTTGGGTTTGAAGGGTTGGAAGCATaGCAGCTCACACAGCTGTGGAGGGGGCAGCGGAAACCTCGGCTC +
Preference number: 5 (lower is better)
Translates to: DSISFDGLGFEGLEA*QLTQLWRGQRKPRL
Trigger: GAGCCGAGGTTTCCGCTGCCCCCTCCACAGCTGTGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAAGGCCGTCAAAAGAGATAGAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677559.1
CDS-3UTR CAA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAACTCGGAGTCTTCCCGTaGGCACTGCCGAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: LRARKGATRRRVSSDPWELGVFP*ALPRIS
Trigger: AGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGAG...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCTCCCCTGACCTGGAGAGCTGGGCTTaGCTGAGGAACACAGAACAC +
Preference number: 5 (lower is better)
Translates to: VFSRSGQLPRPGRLSSPDLESWA*LRNTEH
Trigger: GTGTTCTGTGTTCCTCAGCAAAGCCCAGCTCTCCAG...GTCAGGGGAGCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CAA 90 bp CTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGGCCTCATGCCTGTTCCTTCTCGCCTaGTTTTCTGGTTTTTGTCCA +
Preference number: 5 (lower is better)
Translates to: LSSPDSWAGLDPATLASCLFLLA*FSGFCP
Trigger: TGGACAAAAACCAGAAAACAAGGCGAGAAGGAACAG...GCATGAGGCCAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CAA 90 bp CTTCTTCCCAGCCCTGCAGTCATTGCAGAACCAGCTGCCGTCAGGCATCTCGATGCAGAGCTACACAGTTaGGCCCTCCGCCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: LLPSPAVIAEPAAVRHLDAELHS*ALRLLF
Trigger: GAAGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTGC...ATCGAGATGCCTGACGGCAGCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGCTTGTTCTGGCCGTTTaGTCAGTGATTGTGTCTCTC +
Preference number: 5 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGLVLAV*SVIVSL
Trigger: GAGAGACACAATCACTGACAAAACGGCCAGAACAAG...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTGAAGGAGATGAACTTTaGCTAAACCCAAGAGCTGAA +
Preference number: 5 (lower is better)
Translates to: AEDGSVVGRRSLPRRPVREGDEL*LNPRAE
Trigger: TTCAGCTCTTGGGTTTAGCAAAAGTTCATCTCCTTC...ACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp TTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCGGGTTCAAATCCAACTaGACTGGTGTGGGCTCCCAC +
Preference number: 5 (lower is better)
Translates to: FVFRLHFRMGTPRARLPGGFKSN*TGVGSH
Trigger: GTGGGAGCCCACACCAGTCAAGTTGGATTTGAACCC...GCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CAA 90 bp GGTGACTCTCCAGGGTCTCTGCAGAGCTACACAGTTTGGCCCTCCGCCTTCTCTGGGTTCAAATCCAACTaGACTGGTGTGGGCTCCCAC +
Preference number: 5 (lower is better)
Translates to: GDSPGSLQSYTVWPSAFSGFKSN*TGVGSH
Trigger: GTGGGAGCCCACACCAGTCAAGTTGGATTTGAACCC...AGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTGCAGAGACCCTGGAGAGTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR CAA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCTCTTGCAGTGCGTTTTaGAAGACTCTTCCGATCCCT +
Preference number: 5 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPSCSAF*KTLPIP
Trigger: AGGGATCGGAAGAGTCTTCAAAAACGCACTGCAAGA...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGTCTGTCTTGATGATCTaGGTCTCTGGGTACTGGCGC +
Preference number: 5 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLSVLMI*VSGYWR
Trigger: GCGCCAGTACCCAGAGACCAAGATCATCAAGACAGA...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp AAGCACCAGCTCACGTTGACGTGGGCGTGGTGTCGCTTCCCCTTCCGAGCAGTGCCTTTGCCATCTGTCTaGATGATCTTGGTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: KHQLTLTWAWCRFPFRAVPLPSV*MILVSG
Trigger: CCCAGAGACCAAGATCATCAAGACAGATGGCAAAGG...CACTGCTCGGAAGGGGAAGCGACACCACGCCCACGTCAACGTGAGCTGGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp CATTGCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTTTTCTGATGTCCCTCTaGGCGACCAGGCCCCACCCT +
Preference number: 5 (lower is better)
Translates to: HCCHHLQGQLLTRMEKKRFLMSL*ATRPHP
Trigger: AGGGTGGGGCCTGGTCGCCAAGAGGGACATCAGAAA...ACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCAAGGAATCCACTGCAATaGGAGGCTCCACACCGGCAG +
Preference number: 5 (lower is better)
Translates to: CGDTARPVPRTTFQVRASRNPLQ*EAPHRQ
Trigger: CTGCCGGTGTGGAGCCTCCAATTGCAGTGGATTCCT...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAGGAATCCACTGCAATaGGAGGCTCCACACCGGCAG +
Preference number: 5 (lower is better)
Translates to: LRARKGATRRRVSSDPWERNPLQ*EAPHRQ
Trigger: CTGCCGGTGTGGAGCCTCCAATTGCAGTGGATTCCT...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp CATTGCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTGCCTTGGTGCAGAACTaGCGGTCACACAGCACCAGC +
Preference number: 5 (lower is better)
Translates to: HCCHHLQGQLLTRMEKKRALVQN*RSHSTS
Trigger: GCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGGC...ACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACGGGGGCTTCTCAGTCTaGGTGCTTCTGACCGATGCC +
Preference number: 5 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDGGFSV*VLLTDA
Trigger: GGCATCGGTCAGAAGCACCAAGACTGAGAAGCCCCC...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCAGGGGGCTTCTCAGTCTaGGTGCTTCTGACCGATGCC +
Preference number: 5 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPGGFSV*VLLTDA
Trigger: GGCATCGGTCAGAAGCACCAAGACTGAGAAGCCCCC...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp AATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGGCCGCCTGGCGCTATTaGCCCTCTGTGACTCTCCGC +
Preference number: 5 (lower is better)
Translates to: NKVVLEDGHCTRRGLDVKAAWRY*PSVTLR
Trigger: GCGGAGAGTCACAGAGGGCAAATAGCGCCAGGCGGC...CTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp AGAGTGGGAGGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGGCCGCCTGGCGCTATTaGCCCTCTGTGACTCTCCGC +
Preference number: 5 (lower is better)
Translates to: RVGGNLDIRRNSSVAVTLAAWRY*PSVTLR
Trigger: GCGGAGAGTCACAGAGGGCAAATAGCGCCAGGCGGC...CAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp GTCAGTCCTCACACGGGCCTCACCCAGCCTCTCCCGAGTGGCGACGGCGCTGAGATTAATGATGGAGGATaGAAGCTGATGTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: VSPHTGLTQPLPSGDGAEINDGG*KLMFRK
Trigger: CTTCCTGAACATCAGCTTCAATCCTCCATCATTAAT...CTCAGCGCCGTCGCCACTCGGGAGAGGCTGGGTGAGGCCCGTGTGAGGACTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp CACAGGAGCAGCAAGCTTGCTCCTGACAGCATGGCTCTCACACAGCATCCTCCCGATTACAGTATCCCCTaGGTCCGGGGCCTTGGATCA +
Preference number: 5 (lower is better)
Translates to: HRSSKLAPDSMALTQHPPDYSIP*VRGLGS
Trigger: TGATCCAAGGCCCCGGACCAAGGGGATACTGTAATC...GGGAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS GCA 90 bp CGCCCGGCAGTCCCTTCTGCACCTCTTACCACAAGGGAAGCCGTCTaGTTCTGTCTCCAGTGGCAGAAAATCCCATTTTGCTGGCACACA +
Preference number: 5 (lower is better)
Translates to: RPAVPSAPLTTREAV*FCLQWQKIPFCWHT
Trigger: TGTGTGCCAGCAAAATGGGATTTTCTGCCACTGGAGACAGAAGCAGACGGCTTCCCTTGTGGTAAGAGGTGCAGAAGGGACTGCCGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513726.5
CDS CCA 90 bp CCCTGCAAGAGGAGGGCGAGGCGGCCAGGCTTAGCCTGTCTGCTATaGCTCAGCCCAGATTCAGTGCTTCACAGTCTACACTTATTACAG +
Preference number: 5 (lower is better)
Translates to: PCKRRARRPGLACLL*LSPDSVLHSLHLLQ
Trigger: CTGTAATAAGTGTAGACTGTGAAGCACTGAATCTGGGCTGAGCCATAGCAGACAGGCTAAGCCTGGCCGCCTCGCCCTCCTCTTGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507094.1
CDS CCA 90 bp AACAGTGAGACCTCGTCTCTTTTGACGGCCTTGGGTTTGAAGGGTTaGAAGCATGGCAGCTCACACAGCTGTGGAGGGGGCAGCGGAAAC +
Preference number: 5 (lower is better)
Translates to: NSETSSLLTALGLKG*KHGSSHSCGGGSGN
Trigger: GTTTCCGCTGCCCCCTCCACAGCTGTGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAAGGCCGTCAAAAGAGACGAGGTCTCACTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505643.5
CDS-3UTR CAA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGCTCGGAGTCTTCCCGTaGGCACTGCCGAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGLGVFP*ALPRIS
Trigger: AGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGAG...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CCCTGCAGAAAATCCCACTCGGAGGAGTGGTCGCTGAGGATTCAGAGTGGCAAGCTGGAGAGCTGGGCTTaGCTGAGGAACACAGAACAC +
Preference number: 5 (lower is better)
Translates to: PCRKSHSEEWSLRIQSGKLESWA*LRNTEH
Trigger: GTGTTCTGTGTTCCTCAGCAAAGCCCAGCTCTCCAG...CTTGCCACTCTGAATCCTCAGCGACCACTCCTCCGAGTGGGATTTTCTGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CAA 90 bp GGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAATGGACTCAAAACGCAGTTaGGCATCGTGTGCGCCGGGT +
Preference number: 5 (lower is better)
Translates to: GQVAAAPNSRPALVKGKMDSKRS*ASCAPG
Trigger: ACCCGGCGCACACGATGCCAAACTGCGTTTTGAGTC...CATTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATTTCAACAGGTGGTCTTaGTCTCTTCCAGTGTTTGGA +
Preference number: 5 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDFNRWS*SLPVFG
Trigger: TCCAAACACTGGAAGAGACAAAGACCACCTGTTGAA...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAATTCAACAGGTGGTCTTaGTCTCTTCCAGTGTTTGGA +
Preference number: 5 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEFNRWS*SLPVFG
Trigger: TCCAAACACTGGAAGAGACAAAGACCACCTGTTGAA...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGTTCAACAGGTGGTCTTaGTCTCTTCCAGTGTTTGGA +
Preference number: 5 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGFNRWS*SLPVFG
Trigger: TCCAAACACTGGAAGAGACAAAGACCACCTGTTGAA...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GGACAGGTGGTAGGCCTTGGTGCAGAACTTGCGGTCACACAGCACCAGCTGCCCTCTTCTCTCACAGACTaGGGGTTTTCAGCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: GQVVGLGAELAVTQHQLPSSLTD*GFSAAS
Trigger: AGAAGCTGCTGAAAACCCCAAGTCTGTGAGAGAAGA...GGGCAGCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp GAGCCTAGGTCTGGAAGCAACAGGAATCAGGTGTGGTGTGTGAGTCGCCTTCCAGCAGAGCTACACAGTTaGGCCCTCCGCCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: EPRSGSNRNQVWCVSRLPAELHS*ALRLLF
Trigger: GAAGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTGC...TGGAAGGCGACTCACACACCACACCTGATTCCTGTTGCTTCCAGACCTAGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CAA 90 bp GCTATCAGACAGGAGCCTCTCCAGCGAGGGGAATCCGTGGCTTTACAGCCCTCCTGGCCTTGTAAGAGCTaGTTCTGGCCGTTTTGTCAG +
Preference number: 5 (lower is better)
Translates to: AIRQEPLQRGESVALQPSWPCKS*FWPFCQ
Trigger: CTGACAAAACGGCCAGAACAAGCTCTTACAAGGCCA...GGAGGGCTGTAAAGCCACGGATTCCCCTCGCTGGAGAGGCTCCTGTCTGATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGCATCATTTTACCTTTaGACGGCCTTGGGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPASFYL*TALGLK
Trigger: CTTCAAACCCAAGGCCGTCAAAAGGTAAAATGATGC...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
CDS-3UTR CAA 90 bp TCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGGCAGAGGTGGCAAAATGAAGCCAGCCCTGCAGTCATaGCAGAACCAGCTGCCGTCA +
Preference number: 5 (lower is better)
Translates to: SRPGAPYRTNWGRGGKMKPALQS*QNQLPS
Trigger: TGACGGCAGCTGGTTCTGCAATGACTGCAGGGCTGG...CTTCATTTTGCCACCTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGACGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGACGAGCTTCAGCTTCTaGCAGTGCGTTTTTGAAGAC +
Preference number: 5 (lower is better)
Translates to: KHCEGDPASHGRVSPEERTSFSF*QCVFED
Trigger: GTCTTCAAAAACGCACTGCAAGAAGCTGAAGCTCGT...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTATTGTATGGTGGGGGCTaGCGCTCGCTCTCCTGTGTT +
Preference number: 5 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLLYGGG*RSLSCV
Trigger: AACACAGGAGAGCGAGCGCAAGCCCCCACCATACAA...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GCTGCCCGGCTTCTCACACAGCTGGCACACATACTCCTTTTTGGCAGTCACTCCTTCACCTTGATGTGCTaGTATGGTGGGGGCTTGCGC +
Preference number: 5 (lower is better)
Translates to: AARLLTQLAHILLFGSHSFTLMC*YGGGLR
Trigger: GCGCAAGCCCCCACCATACAAGCACATCAAGGTGAA...GGAGTGACTGCCAAAAAGGAGTATGTGTGCCAGCTGTGTGAGAAGCCGGGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CAA 90 bp AATGATCACAATGGCAGTTTCGAGGAATCCAGGGTCAGTCCTCACACGGGCCTCTTTCTGATGTCCCTCTaGGCGACCAGGCCCCACCCT +
Preference number: 5 (lower is better)
Translates to: NDHNGSFEESRVSPHTGLFLMSL*ATRPHP
Trigger: AGGGTGGGGCCTGGTCGCCAAGAGGGACATCAGAAA...GAGGCCCGTGTGAGGACTGACCCTGGATTCCTCGAAACTGCCATTGTGATCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCATTCTCGTGTGCGTGCTaGATTCTCGCCATGCACTCC +
Preference number: 5 (lower is better)
Translates to: CGDTARPVPRTTFQVRASFSCAC*ILAMHS
Trigger: GGAGTGCATGGCGAGAATCAAGCACGCACACGAGAA...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACAGGAATCCACTGCAATaGGAGGCTCCACACCGGCAG +
Preference number: 5 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDRNPLQ*EAPHRQ
Trigger: CTGCCGGTGTGGAGCCTCCAATTGCAGTGGATTCCT...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAGGGGGCTTCTCAGTCTaGGTGCTTCTGACCGATGCC +
Preference number: 5 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRGGFSV*VLLTDA
Trigger: GGCATCGGTCAGAAGCACCAAGACTGAGAAGCCCCC...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp AGGCGCTCCCTCCCGAGGAGGCCTGTACGTCTGTGTCCTGGCGGCTCGAGCTGGAAAGTGGACGTGTTATaGGCATTTCATTCAAATCCA +
Preference number: 5 (lower is better)
Translates to: RRSLPRRPVRLCPGGSSWKVDVL*AFHSNP
Trigger: TGGATTTGAATGAAATGCCAATAACACGTCCACTTT...CCAGCTCGAGCCGCCAGGACACAGACGTACAGGCCTCCTCGGGAGGGAGCGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp CAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAACCCCACGAAAGTGGACGTGTTATaGGCATTTCATTCAAATCCA +
Preference number: 5 (lower is better)
Translates to: QCSGRRGTLQGHTPLNPTKVDVL*AFHSNP
Trigger: TGGATTTGAATGAAATGCCAATAACACGTCCACTTT...CGTGGGGTTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp AACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTCGCGTAAACTACACGTaGAAAGTGGACGTGTTATTG +
Preference number: 5 (lower is better)
Translates to: NFQSVLREAWDPAGPHTPRVNYT*KVDVLL
Trigger: CAATAACACGTCCACTTTCAACGTGTAGTTTACGCG...AGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp ACGTACGAGGCACGCACACCTGCCAGGCAGGCCTCCACCCCCAGGACCGCACCTATAGGATCAAGATATTaGGCAACTGACAGTCATTTG +
Preference number: 5 (lower is better)
Translates to: TYEARTPARQASTPRTAPIGSRY*ATDSHL
Trigger: CAAATGACTGTCAGTTGCCAAATATCTTGATCCTAT...AGGTGCGGTCCTGGGGGTGGAGGCCTGCCTGGCAGGTGTGCGTGCCTCGTACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGTCACGACATGAAAGGTaGTGTCATGAAACCTCGCTT +
Preference number: 5 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKSRHER*CHETSL
Trigger: AAGCGAGGTTTCATGACACAACCTTTCATGTCGTGA...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGGGGAATGCAGTCTCCTaGATCTATTACAGGGACTTT +
Preference number: 5 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKGNAVS*IYYRDF
Trigger: AAAGTCCCTGTAATAGATCAAGGAGACTGCATTCCC...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCATCAAGAACTTTCCCGTaGTTTCCCGCGTCCACCACA +
Preference number: 5 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPSRTFP*FPASTT
Trigger: TGTGGTGGACGCGGGAAACAACGGGAAAGTTCTTGA...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp CCAGGGAGACTGAGCTCCCCTGACTCATGGGCAGGCCTCGACCCCGCTACACTGTTCCTTCACAGGCCTTaGTCATGCAAGTGTGTAATT +
Preference number: 5 (lower is better)
Translates to: PGRLSSPDSWAGLDPATLFLHRP*SCKCVI
Trigger: AATTACACACTTGCATGACAAAGGCCTGTGAAGGAA...CAGTGTAGCGGGGTCGAGGCCTGCCCATGAGTCAGGGGAGCTCAGTCTCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420906.6
CDS TCA 90 bp GCGTCTGTGAGGCATTGTTCTGGCAGCCCCAGGAAACACGTTCAGTaGGGAACTCTTAACCACTGGCCTTTGTTGAGAGCCATCCTCCCC +
Preference number: 5 (lower is better)
Translates to: ASVRHCSGSPRKHVQ*GTLNHWPLLRAILP
Trigger: GGGGAGGATGGCTCTCAACAAAGGCCAGTGGTTAAGAGTTCCTCACTGAACGTGTTTCCTGGGGCTGCCAGAACAATGCCTCACAGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515695.1
CDS CCA 90 bp ACACAGAACACTCGCGGTTCACCTCGCAGCTCGGAGTCTTCCCGTTaGCACTGCCGAGGATTTCTGGTGCCTGCTTCATCTTTATGCACT +
Preference number: 5 (lower is better)
Translates to: TQNTRGSPRSSESSR*HCRGFLVPASSLCT
Trigger: AGTGCATAAAGATGAAGCAGGCACCAGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGAGCTGCGAGGTGAACCGCGAGTGTTCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000398261.6
ENST00000420906.6
ENST00000503128.5
ENST00000508355.5
ENST00000508803.6
ENST00000509115.5
ENST00000512700.2
ENST00000514045.5
ENST00000515806.1
ENST00000677559.1
ENST00000678714.1
CDS CCA 90 bp GTAAGATCTTTCAGCTTGTCGGCTGGAATAAAGGGCAGGGCGTCGTaGCCGTTAAACTTCTGCATGACCCCCTCCTGCAGGCTACTGGAG +
Preference number: 5 (lower is better)
Translates to: VRSFSLSAGIKGRAS*PLNFCMTPSCRLLE
Trigger: CTCCAGTAGCCTGCAGGAGGGGGTCATGCAGAAGTTTAACGGCCACGACGCCCTGCCCTTTATTCCAGCCGACAAGCTGAAAGATCTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000398261.6
ENST00000420906.6
ENST00000503128.5
ENST00000508355.5
ENST00000508803.6
ENST00000509115.5
ENST00000512700.2
ENST00000514045.5
ENST00000515806.1
ENST00000677559.1
ENST00000678714.1
CDS CCA 90 bp CAGAGCAAGACTCTATCTCTTTTGACGGCCTTGGGTTTGAAGGGTTaGAAGCATGGCAGCTCACACAGCTGTGGAGGGGGCAGCGGAAAC +
Preference number: 5 (lower is better)
Translates to: QSKTLSLLTALGLKG*KHGSSHSCGGGSGN
Trigger: GTTTCCGCTGCCCCCTCCACAGCTGTGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAAGGCCGTCAAAAGAGATAGAGTCTTGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677559.1
CDS-3UTR CAA 90 bp GAAAGCCCAAGGCAGGCGAGGTGGAAAGCTCCGCAGCAGGGTCCTTCACAGAGCTTCAACAGGTGGTCTTaGTCTCTTCCAGTGTTTGGA +
Preference number: 5 (lower is better)
Translates to: ESPRQARWKAPQQGPSQSFNRWS*SLPVFG
Trigger: TCCAAACACTGGAAGAGACAAAGACCACCTGTTGAA...GCTCTGTGAAGGACCCTGCTGCGGAGCTTTCCACCTCGCCTGCCTTGGGCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CAA 90 bp CGGAAGAAAGGCCGGCCTGAGGACGGACAGCTGGGTTCTCACTTCAGGTGCCTGTTCAACAGGTGGTCTTaGTCTCTTCCAGTGTTTGGA +
Preference number: 5 (lower is better)
Translates to: RKKGRPEDGQLGSHFRCLFNRWS*SLPVFG
Trigger: TCCAAACACTGGAAGAGACAAAGACCACCTGTTGAA...CAGGCACCTGAAGTGAGAACCCAGCTGTCCGTCCTCAGGCCGGCCTTTCTTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGACCAAATCACCAACGTaGTATTTCAACAGGTGGTCT +
Preference number: 5 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGTKSPT*YFNRWS
Trigger: AGACCACCTGTTGAAATACAACGTTGGTGATTTGGT...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAGCCTCCTTGGCTACTaGAGGGTTGAGATGAAGCTG +
Preference number: 5 (lower is better)
Translates to: LRARKGATRRRVSSDPWESLLGY*RVEMKL
Trigger: CAGCTTCATCTCAACCCTCAAGTAGCCAAGGAGGCT...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCAAGCCTCCTTGGCTACTaGAGGGTTGAGATGAAGCTG +
Preference number: 5 (lower is better)
Translates to: CGDTARPVPRTTFQVRASSLLGY*RVEMKL
Trigger: CAGCTTCATCTCAACCCTCAAGTAGCCAAGGAGGCT...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCGCAGAGCTACACAGTTaGGCCCTCCGCCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSAELHS*ALRLLF
Trigger: GAAGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTGC...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp TCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGGCAGAGGTGGCAAAATGAAGGCAGAGCTACACAGTTaGGCCCTCCGCCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: SRPGAPYRTNWGRGGKMKAELHS*ALRLLF
Trigger: GAAGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTGC...CTTCATTTTGCCACCTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGACGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATTCCGAAGACTGTGCTaGTCCGTCCTGAGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVFRRLC*SVLSLF
Trigger: GAAAAGACTCAGGACGGACAAGCACAGTCTTCGGAA...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCGACAGATACTTCAGTTaGTGTTTCGTCTGCACTTTC +
Preference number: 5 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPDRYFS*CFVCTF
Trigger: GAAAGTGCAGACGAAACACAAACTGAAGTATCTGTC...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GGCAGGAGAGCTAGACTCCGTCTCTCTTTAGACCCACGTGCTGGGGTCCCCGGGGACAGATACTTCAGTTaGTGTTTCGTCTGCACTTTC +
Preference number: 5 (lower is better)
Translates to: GRRARLRLSLDPRAGVPGDRYFS*CFVCTF
Trigger: GAAAGTGCAGACGAAACACAAACTGAAGTATCTGTC...CCCGGGGACCCCAGCACGTGGGTCTAAAGAGAGACGGAGTCTAGCTCTCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCGCTTAACATCTGTCTaGCTCTCTTTACACACGAAA +
Preference number: 5 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDRLTSV*LSLHTK
Trigger: TTTCGTGTGTAAAGAGAGCAAGACAGATGTTAAGCG...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAGTGCAGATGATGCTGTaGGAGGCGATCACTGAGCAT +
Preference number: 5 (lower is better)
Translates to: LRARKGATRRRVSSDPWEVQMML*EAITEH
Trigger: ATGCTCAGTGATCGCCTCCAACAGCATCATCTGCAC...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACACATTTCAGAGGAGAAAGCACCAGCTCACGTaGACGTGGGCGTGGTGTCGC +
Preference number: 5 (lower is better)
Translates to: DEFLATLGKSLRYTFQRRKHQLT*TWAWCR
Trigger: GCGACACCACGCCCACGTCAACGTGAGCTGGTGCTT...TCTCCTCTGAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGTTTGGGGGAACATTTTaGGGATGGCAAACTTCTGCC +
Preference number: 5 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLFGGTF*GWQTSA
Trigger: GGCAGAAGTTTGCCATCCCAAAAATGTTCCCCCAAA...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp AATGATCACAATGGCAGTTTCGAGGAATCCAGGGTCAGTCCTCACACGGGCCTCTTGTATGGTGGGGGCTaGCGCTCGCTCTCCTGTGTT +
Preference number: 5 (lower is better)
Translates to: NDHNGSFEESRVSPHTGLLYGGG*RSLSCV
Trigger: AACACAGGAGAGCGAGCGCAAGCCCCCACCATACAA...GAGGCCCGTGTGAGGACTGACCCTGGATTCCTCGAAACTGCCATTGTGATCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACTTCACCTTGATGTGCTaGTATGGTGGGGGCTTGCGC +
Preference number: 5 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDFTLMC*YGGGLR
Trigger: GCGCAAGCCCCCACCATACAAGCACATCAAGGTGAA...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGTTCACCTTGATGTGCTaGTATGGTGGGGGCTTGCGC +
Preference number: 5 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGFTLMC*YGGGLR
Trigger: GCGCAAGCCCCCACCATACAAGCACATCAAGGTGAA...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGTCTGTGGGCTTGCAGTaGCACTTAGGGATTTCTGAA +
Preference number: 5 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWSVGLQ*HLGISE
Trigger: TTCAGAAATCCCTAAGTGCAACTGCAAGCCCACAGA...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATTCTGTCTTGATGATCTaGGTCTCTGGGTACTGGCGC +
Preference number: 5 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYSVLMI*VSGYWR
Trigger: GCGCCAGTACCCAGAGACCAAGATCATCAAGACAGA...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCATCTGTCTTGATGATCTaGGTCTCTGGGTACTGGCGC +
Preference number: 5 (lower is better)
Translates to: CGDTARPVPRTTFQVRASSVLMI*VSGYWR
Trigger: GCGCCAGTACCCAGAGACCAAGATCATCAAGACAGA...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGGCAGAGCCTTTGCCATCTGTCTaGATGATCTTGGTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: AAEGCPVLVLLTERIGAEPLPSV*MILVSG
Trigger: CCCAGAGACCAAGATCATCAAGACAGATGGCAAAGG...CTCTGCCCCAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTTCAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACTTCTCGTGTGCGTGCTaGATTCTCGCCATGCACTCC +
Preference number: 5 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDFSCAC*ILAMHS
Trigger: GGAGTGCATGGCGAGAATCAAGCACGCACACGAGAA...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGGAGTGGGAGGGAACCTaGACATTCGGAGAAATTCAA +
Preference number: 5 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWEWEGT*TFGEIQ
Trigger: TTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTC...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp GCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTAAAGTGGACGTGTTATaGGCATTTCATTCAAATCCA +
Preference number: 5 (lower is better)
Translates to: AEDGSVVGRRSLPRRPVRKVDVL*AFHSNP
Trigger: TGGATTTGAATGAAATGCCAATAACACGTCCACTTT...ACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp CGGGGTGCAGCTGAAGGCTGTCCCGTCCTGGTGCTCCTTACAGAACGAATTGGGAGGAATCCTGAGGGATaGGGGCGGTTTTTGTGTTTT +
Preference number: 5 (lower is better)
Translates to: RGAAEGCPVLVLLTERIGRNPEG*GRFLCF
Trigger: AAAACACAAAAACCGCCCCAATCCCTCAGGATTCCT...CCCAATTCGTTCTGTAAGGAGCACCAGGACGGGACAGCCTTCAGCTGCACCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp GCTGAGGATGGCTCAGTGGTGGGGAGGCGCTCCCTCCCGAGGAGGCCTGTACGTATAGGATCAAGATATTaGGCAACTGACAGTCATTTG +
Preference number: 5 (lower is better)
Translates to: AEDGSVVGRRSLPRRPVRIGSRY*ATDSHL
Trigger: CAAATGACTGTCAGTTGCCAAATATCTTGATCCTAT...ACGTACAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCATCCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGGGACTGCCTTTCAACTaGAAATCTACATTGACCACT +
Preference number: 5 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKGLPFN*KSTLTT
Trigger: AGTGGTCAATGTAGATTTCAAGTTGAAAGGCAGTCC...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp GCTATCAGACAGGAGCCTCTCCAGCGAGGGGAATCCGTGGCTTTACAGCCCTCCCTGTCTGCGAAGGACTaGAGGACAATGACAAAACTG +
Preference number: 5 (lower is better)
Translates to: AIRQEPLQRGESVALQPSLSAKD*RTMTKL
Trigger: CAGTTTTGTCATTGTCCTCAAGTCCTTCGCAGACAG...GGAGGGCTGTAAAGCCACGGATTCCCCTCGCTGGAGAGGCTCCTGTCTGATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGGTACCTCCACAGTGTTaGCGTTTACAAATGACAACA +
Preference number: 5 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKVPPQC*RLQMTT
Trigger: TGTTGTCATTTGTAAACGCAAACACTGTGGAGGTAC...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS CCA 90 bp CCTATGAAAAGAGGCCTTTCCTCCTTGAGAGCAGCTGGCCAGTGGTaGAGCAGTCACTTATCATTCTGGGCAGGCAGACAGACACTCCCA +
Preference number: 5 (lower is better)
Translates to: PMKRGLSSLRAAGQW*SSHLSFWAGRQTLP
Trigger: TGGGAGTGTCTGTCTGCCTGCCCAGAATGATAAGTGACTGCTCCACCACTGGCCAGCTGCTCTCAAGGAGGAAAGGCCTCTTTTCATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382888.3
CDS CCA 90 bp GCTCCTATGAAAAGAGGCCTTTCCTCCTTGAGAGCAGCTGGCCAGTaGTGGAGCAGTCACTTATCATTCTGGGCAGGCAGACAGACACTC +
Preference number: 5 (lower is better)
Translates to: APMKRGLSSLRAAGQ*WSSHLSFWAGRQTL
Trigger: GAGTGTCTGTCTGCCTGCCCAGAATGATAAGTGACTGCTCCACCACTGGCCAGCTGCTCTCAAGGAGGAAAGGCCTCTTTTCATAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382888.3
CDS CCA 90 bp AGAAGGGGCTCCTATGAAAAGAGGCCTTTCCTCCTTGAGAGCAGCTaGCCAGTGGTGGAGCAGTCACTTATCATTCTGGGCAGGCAGACA +
Preference number: 5 (lower is better)
Translates to: RRGSYEKRPFLLESS*PVVEQSLIILGRQT
Trigger: TGTCTGCCTGCCCAGAATGATAAGTGACTGCTCCACCACTGGCCAGCTGCTCTCAAGGAGGAAAGGCCTCTTTTCATAGGAGCCCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382888.3
CDS-3UTR CAA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTAGAAAGGGGACTCTGCTaGATGCTAAATTCCATCCAG +
Preference number: 5 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVERGLC*MLNSIQ
Trigger: CTGGATGGAATTTAGCATCAAGCAGAGTCCCCTTTC...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CATGCACTCCTCCTCGTCGATCAGCTCCCCAACGTACTCGTTAACAAATTCTCCCTCGGAGTCTTCCCGTaGGCACTGCCGAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: HALLLVDQLPNVLVNKFSLGVFP*ALPRIS
Trigger: AGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGAG...GGAGAATTTGTTAACGAGTACGTTGGGGAGCTGATCGACGAGGAGGAGTGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGCTCGGAGTCTTCCCGTaGGCACTGCCGAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKLGVFP*ALPRIS
Trigger: AGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGAG...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp GATATCCTGGAAGTGCAGCTTCTTCCCAGCCCTGCAGTCATTGCAGAACCAGCTCTGGAGAGCTGGGCTTaGCTGAGGAACACAGAACAC +
Preference number: 5 (lower is better)
Translates to: DILEVQLLPSPAVIAEPALESWA*LRNTEH
Trigger: GTGTTCTGTGTTCCTCAGCAAAGCCCAGCTCTCCAG...AGCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAGCTGCACTTCCAGGATATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGACTGGAGAGCTGGGCTTaGCTGAGGAACACAGAACAC +
Preference number: 5 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRLESWA*LRNTEH
Trigger: GTGTTCTGTGTTCCTCAGCAAAGCCCAGCTCTCCAG...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGGACTCAAAACGCAGTTaGGCATCGTGTGCGCCGGGT +
Preference number: 5 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKDSKRS*ASCAPG
Trigger: ACCCGGCGCACACGATGCCAAACTGCGTTTTGAGTC...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp GGACAGGTGGTAGGCCTTGGTGCAGAACTTGCGGTCACACAGCACCAGCTGCCCACCAAATCACCAACGTaGTATTTCAACAGGTGGTCT +
Preference number: 5 (lower is better)
Translates to: GQVVGLGAELAVTQHQLPTKSPT*YFNRWS
Trigger: AGACCACCTGTTGAAATACAACGTTGGTGATTTGGT...GGGCAGCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp CACAGGAGCAGCAAGCTTGCTCCTGACAGCATGGCTCTCACACAGCATCCTCCCTCTTCTCTCACAGACTaGGGGTTTTCAGCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: HRSSKLAPDSMALTQHPPSSLTD*GFSAAS
Trigger: AGAAGCTGCTGAAAACCCCAAGTCTGTGAGAGAAGA...GGGAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATTTCCGAAGACTGTGCTaGTCCGTCCTGAGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYFRRLC*SVLSLF
Trigger: GAAAAGACTCAGGACGGACAAGCACAGTCTTCGGAA...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCACTTGTTCTGGCCGTTTaGTCAGTGATTGTGTCTCTC +
Preference number: 5 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPLVLAV*SVIVSL
Trigger: GAGAGACACAATCACTGACAAAACGGCCAGAACAAG...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp CACAGGAGCAGCAAGCTTGCTCCTGACAGCATGGCTCTCACACAGCATCCTCCCCTTGTTCTGGCCGTTTaGTCAGTGATTGTGTCTCTC +
Preference number: 5 (lower is better)
Translates to: HRSSKLAPDSMALTQHPPLVLAV*SVIVSL
Trigger: GAGAGACACAATCACTGACAAAACGGCCAGAACAAG...GGGAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp GTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCTCCCCTGACCTTGTTCTGGCCGTTTaGTCAGTGATTGTGTCTCTC +
Preference number: 5 (lower is better)
Translates to: VFSRSGQLPRPGRLSSPDLVLAV*SVIVSL
Trigger: GAGAGACACAATCACTGACAAAACGGCCAGAACAAG...GTCAGGGGAGCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CAA 90 bp CAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGTGGCCTTGTAAGAGCTaGTTCTGGCCGTTTTGTCAG +
Preference number: 5 (lower is better)
Translates to: QFVFRLHFRMGTPRARLPWPCKS*FWPFCQ
Trigger: CTGACAAAACGGCCAGAACAAGCTCTTACAAGGCCA...CGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CAA 90 bp TTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGAGAAGGAGATGAACTTTaGCTAAACCCAAGAGCTGAA +
Preference number: 5 (lower is better)
Translates to: FVCTFVWGLRGLVSRAVREGDEL*LNPRAE
Trigger: TTCAGCTCTTGGGTTTAGCAAAAGTTCATCTCCTTC...TCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR CAA 90 bp GGACAGGTGGTAGGCCTTGGTGCAGAACTTGCGGTCACACAGCACCAGCTGCCCGACAGATACTTCAGTTaGTGTTTCGTCTGCACTTTC +
Preference number: 5 (lower is better)
Translates to: GQVVGLGAELAVTQHQLPDRYFS*CFVCTF
Trigger: GAAAGTGCAGACGAAACACAAACTGAAGTATCTGTC...GGGCAGCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGCCTCGCTCAGACTTTTaGGATGAGACAGATACTTCA +
Preference number: 5 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLPRSDF*DETDTS
Trigger: TGAAGTATCTGTCTCATCCAAAAAGTCTGAGCGAGG...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CTGAGAGCCAGAAAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAACACACATACTCCTTTTaGGCAGTCACTCCTCGCTCA +
Preference number: 5 (lower is better)
Translates to: LRARKGATRRRVSSDPWEHTYSF*AVTPRS
Trigger: TGAGCGAGGAGTGACTGCCAAAAAGGAGTATGTGTG...TTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTTTCTGGCTCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGACACACATACTCCTTTTaGGCAGTCACTCCTCGCTCA +
Preference number: 5 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRHTYSF*AVTPRS
Trigger: TGAGCGAGGAGTGACTGCCAAAAAGGAGTATGTGTG...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp AAACACTGCGAAGGGGACCCAGCCAGCCATGGACGGGTGTCGCCGGAAGAAAGGCGCTTAACATCTGTCTaGCTCTCTTTACACACGAAA +
Preference number: 5 (lower is better)
Translates to: KHCEGDPASHGRVSPEERRLTSV*LSLHTK
Trigger: TTTCGTGTGTAAAGAGAGCAAGACAGATGTTAAGCG...CCTTTCTTCCGGCGACACCCGTCCATGGCTGGCTGGGTCCCCTTCGCAGTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGATTGACGGCCTTGGGTTaGAAGGGTTGGAAGCATGGC +
Preference number: 5 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRLTALG*KGWKHG
Trigger: GCCATGCTTCCAACCCTTCAAACCCAAGGCCGTCAA...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGATACCTTTTGACGGCCTaGGGTTTGAAGGGTTGGAAG +
Preference number: 5 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRYLLTA*GLKGWK
Trigger: CTTCCAACCCTTCAAACCCAAGGCCGTCAAAAGGTA...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
CDS-3UTR CAA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCATACCTTTTGACGGCCTaGGGTTTGAAGGGTTGGAAG +
Preference number: 5 (lower is better)
Translates to: CGDTARPVPRTTFQVRASYLLTA*GLKGWK
Trigger: CTTCCAACCCTTCAAACCCAAGGCCGTCAAAAGGTA...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
CDS-3UTR CAA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGGCATCATTTTACCTTTaGACGGCCTTGGGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWASFYL*TALGLK
Trigger: CTTCAAACCCAAGGCCGTCAAAAGGTAAAATGATGC...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
CDS-3UTR CAA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACGTGCAGATGATGCTGTaGGAGGCGATCACTGAGCAT +
Preference number: 5 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDVQMML*EAITEH
Trigger: ATGCTCAGTGATCGCCTCCAACAGCATCATCTGCAC...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GGCTTCCCTCTGAAGCTTAATTTCACGAAAACGAGCTTCAGCTTCTTGCAGTGCAAGCACCAGCTCACGTaGACGTGGGCGTGGTGTCGC +
Preference number: 5 (lower is better)
Translates to: GFPLKLNFTKTSFSFLQCKHQLT*TWAWCR
Trigger: GCGACACCACGCCCACGTCAACGTGAGCTGGTGCTT...GCACTGCAAGAAGCTGAAGCTCGTTTTCGTGAAATTAAGCTTCAGAGGGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTACCAGCCCTGCAGTCATaGCAGAACCAGCTGCCGTCA +
Preference number: 5 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLPALQS*QNQLPS
Trigger: TGACGGCAGCTGGTTCTGCAATGACTGCAGGGCTGG...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp AATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGTTGTATGGTGGGGGCTaGCGCTCGCTCTCCTGTGTT +
Preference number: 5 (lower is better)
Translates to: NKVVLEDGHCTRRGLDVKLYGGG*RSLSCV
Trigger: AACACAGGAGAGCGAGCGCAAGCCCCCACCATACAA...CTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCTTCTCGTGTGCGTGCTaGATTCTCGCCATGCACTCC +
Preference number: 5 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLFSCAC*ILAMHS
Trigger: GGAGTGCATGGCGAGAATCAAGCACGCACACGAGAA...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp AGAGTGGGAGGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAATCCACTGCAATaGGAGGCTCCACACCGGCAG +
Preference number: 5 (lower is better)
Translates to: RVGGNLDIRRNSSVAVTLRNPLQ*EAPHRQ
Trigger: CTGCCGGTGTGGAGCCTCCAATTGCAGTGGATTCCT...CAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGCCTTGGTGCAGAACTaGCGGTCACACAGCACCAGC +
Preference number: 5 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLALVQN*RSHSTS
Trigger: GCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGGC...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGCGCGTAAACTACACGTaGAAAGTGGACGTGTTATTG +
Preference number: 5 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLRVNYT*KVDVLL
Trigger: CAATAACACGTCCACTTTCAACGTGTAGTTTACGCG...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp GAAACTTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCATTAATGATGGAGGATaGAAGCTGATGTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: ETSSQCSGRRGTLQGHTPINDGG*KLMFRK
Trigger: CTTCCTGAACATCAGCTTCAATCCTCCATCATTAAT...GGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAAGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGGGACTGCCTTTCAACTaGAAATCTACATTGACCACT +
Preference number: 5 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWGLPFN*KSTLTT
Trigger: AGTGGTCAATGTAGATTTCAAGTTGAAAGGCAGTCC...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp GCTATCAGACAGGAGCCTCTCCAGCGAGGGGAATCCGTGGCTTTACAGCCCTCCGTAACACAGCTTAGATaGCTCCTAGACCATCTTTGG +
Preference number: 5 (lower is better)
Translates to: AIRQEPLQRGESVALQPSVTQLR*LLDHLW
Trigger: CCAAAGATGGTCTAGGAGCAATCTAAGCTGTGTTAC...GGAGGGCTGTAAAGCCACGGATTCCCCTCGCTGGAGAGGCTCCTGTCTGATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp AGCAGGTGGCAGCAAGGACCAAGTGTCACCTGTGGCCAGAGTGAGGCCAGGTGGATGTCATGCTGCTCTTaGGACACCATTTGGTCATTT +
Preference number: 5 (lower is better)
Translates to: SRWQQGPSVTCGQSEARWMSCCS*DTIWSF
Trigger: AAATGACCAAATGGTGTCCAAAGAGCAGCATGACAT...CCACCTGGCCTCACTCTGGCCACAGGTGACACTTGGTCCTTGCTGCCACCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS GCA 90 bp AACACTCGCGGTTCACCTCGCAGCTCGGAGTCTTCCCGTTGGCACTaGCGAGGATTTCTGGTGCCTGCTTCATCTTTATGCACTTTACAA +
Preference number: 5 (lower is better)
Translates to: NTRGSPRSSESSRWH*RGFLVPASSLCTLQ
Trigger: TTGTAAAGTGCATAAAGATGAAGCAGGCACCAGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGAGCTGCGAGGTGAACCGCGAGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000398261.6
ENST00000420906.6
ENST00000503128.5
ENST00000508355.5
ENST00000508803.6
ENST00000509115.5
ENST00000512700.2
ENST00000514045.5
ENST00000515806.1
ENST00000677559.1
ENST00000678714.1
CDS-3UTR CAA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGCTGGAGAGCTGGGCTTaGCTGAGGAACACAGAACAC +
Preference number: 5 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSELESWA*LRNTEH
Trigger: GTGTTCTGTGTTCCTCAGCAAAGCCCAGCTCTCCAG...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGACTCAAAACGCAGTTaGGCATCGTGTGCGCCGGGT +
Preference number: 5 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLDSKRS*ASCAPG
Trigger: ACCCGGCGCACACGATGCCAAACTGCGTTTTGAGTC...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCATCTATCAGTTATGGGCTAGACTCAAAACGCAGTTaGGCATCGTGTGCGCCGGGT +
Preference number: 5 (lower is better)
Translates to: EGAPMRWLTSNASISYGLDSKRS*ASCAPG
Trigger: ACCCGGCGCACACGATGCCAAACTGCGTTTTGAGTC...TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGACCAAATCACCAACGTaGTATTTCAACAGGTGGTCT +
Preference number: 5 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWTKSPT*YFNRWS
Trigger: AGACCACCTGTTGAAATACAACGTTGGTGATTTGGT...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGTTCCGAAGACTGTGCTaGTCCGTCCTGAGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWFRRLC*SVLSLF
Trigger: GAAAAGACTCAGGACGGACAAGCACAGTCTTCGGAA...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTATTCCGAAGACTGTGCTaGTCCGTCCTGAGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLFRRLC*SVLSLF
Trigger: GAAAAGACTCAGGACGGACAAGCACAGTCTTCGGAA...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACTGGTGTGGGCTCCCACTTCCGAAGACTGTGCTaGTCCGTCCTGAGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: VQYRAAGFKSNLTGVGSHFRRLC*SVLSLF
Trigger: GAAAAGACTCAGGACGGACAAGCACAGTCTTCGGAA...GTGGGAGCCCACACCAGTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000678714.1
CDS-3UTR CAA 90 bp GGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAATGTTCCGAAGACTGTGCTaGTCCGTCCTGAGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: GQVAAAPNSRPALVKGKMFRRLC*SVLSLF
Trigger: GAAAAGACTCAGGACGGACAAGCACAGTCTTCGGAA...CATTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp CGTCTCCCGGGCTGTCCGAGACCTCATTCTCAGTTAAGGATGCAGAAGGAGATGTTCCGAAGACTGTGCTaGTCCGTCCTGAGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: RLPGCPRPHSQLRMQKEMFRRLC*SVLSLF
Trigger: GAAAAGACTCAGGACGGACAAGCACAGTCTTCGGAA...CATCTCCTTCTGCATCCTTAACTGAGAATGAGGTCTCGGACAGCCCGGGAGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511904.1
CDS-3UTR CAA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCACTTGTTCTGGCCGTTTaGTCAGTGATTGTGTCTCTC +
Preference number: 5 (lower is better)
Translates to: CGDTARPVPRTTFQVRASLVLAV*SVIVSL
Trigger: GAGAGACACAATCACTGACAAAACGGCCAGAACAAG...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp AGGTTGCCTAGGTCCCTGACCTTCCTGCACTGGAAGGCCTACACTCCTCTAATGTGGCCTTGTAAGAGCTaGTTCTGGCCGTTTTGTCAG +
Preference number: 5 (lower is better)
Translates to: RLPRSLTFLHWKAYTPLMWPCKS*FWPFCQ
Trigger: CTGACAAAACGGCCAGAACAAGCTCTTACAAGGCCA...CATTAGAGGAGTGTAGGCCTTCCAGTGCAGGAAGGTCAGGGACCTAGGCAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CAA 90 bp GTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACTGGTGTGGGCTCCCACTGGCCTTGTAAGAGCTaGTTCTGGCCGTTTTGTCAG +
Preference number: 5 (lower is better)
Translates to: VQYRAAGFKSNLTGVGSHWPCKS*FWPFCQ
Trigger: CTGACAAAACGGCCAGAACAAGCTCTTACAAGGCCA...GTGGGAGCCCACACCAGTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000678714.1
CDS-3UTR CAA 90 bp CCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATCAGCAGAGACTGGAAGGAGATGAACTTTaGCTAAACCCAAGAGCTGAA +
Preference number: 5 (lower is better)
Translates to: PHLSVGALAEGTCDQQRLEGDEL*LNPRAE
Trigger: TTCAGCTCTTGGGTTTAGCAAAAGTTCATCTCCTTC...CAGTCTCTGCTGATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GGGTTTAGGTGCAGATGCTGGTTTCGGATGCCAAGGAATCCTGAGGGATTGGGGCACACATACTCCTTTTaGGCAGTCACTCCTCGCTCA +
Preference number: 5 (lower is better)
Translates to: GFRCRCWFRMPRNPEGLGHTYSF*AVTPRS
Trigger: TGAGCGAGGAGTGACTGCCAAAAAGGAGTATGTGTG...CCCCAATCCCTCAGGATTCCTTGGCATCCGAAACCAGCATCTGCACCTAAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp AACAAATTCTCCCTTTCTGATGTCCCTCTTGGCGACCAGGCCCCACCCTTTGCCTACCTTTTGACGGCCTaGGGTTTGAAGGGTTGGAAG +
Preference number: 5 (lower is better)
Translates to: NKFSLSDVPLGDQAPPFAYLLTA*GLKGWK
Trigger: CTTCCAACCCTTCAAACCCAAGGCCGTCAAAAGGTA...GGCAAAGGGTGGGGCCTGGTCGCCAAGAGGGACATCAGAAAGGGAGAATTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CAA 90 bp TGGCACACATACTCCTTTTTGGCAGTCACTCCTCGCTCAGACTTTTTGGATGAGCCAGCCCTGCAGTCATaGCAGAACCAGCTGCCGTCA +
Preference number: 5 (lower is better)
Translates to: WHTYSFLAVTPRSDFLDEPALQS*QNQLPS
Trigger: TGACGGCAGCTGGTTCTGCAATGACTGCAGGGCTGG...CTCATCCAAAAAGTCTGAGCGAGGAGTGACTGCCAAAAAGGAGTATGTGTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CAA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACACCAGCCCTGCAGTCATaGCAGAACCAGCTGCCGTCA +
Preference number: 5 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTPALQS*QNQLPS
Trigger: TGACGGCAGCTGGTTCTGCAATGACTGCAGGGCTGG...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp TGCTGTTTTGACGTAAGCATTGGTAGTCCCTTACCTGCCGGAAGGGATCTTTTGCCAGCCCTGCAGTCATaGCAGAACCAGCTGCCGTCA +
Preference number: 5 (lower is better)
Translates to: CCFDVSIGSPLPAGRDLLPALQS*QNQLPS
Trigger: TGACGGCAGCTGGTTCTGCAATGACTGCAGGGCTGG...CAAAAGATCCCTTCCGGCAGGTAAGGGACTACCAATGCTTACGTCAAAACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGTTTGGGGGAACATTTTaGGGATGGCAAACTTCTGCC +
Preference number: 5 (lower is better)
Translates to: QFVFRLHFRMGTPRARLPFGGTF*GWQTSA
Trigger: GGCAGAAGTTTGCCATCCCAAAAATGTTCCCCCAAA...CGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CAA 90 bp TGTGGGGACACTGCCCGGCCTGTCCCTAGAACAACCTTCCAAGTTAGGGCATCATCTTGCAGTGCGTTTTaGAAGACTCTTCCGATCCCT +
Preference number: 5 (lower is better)
Translates to: CGDTARPVPRTTFQVRASSCSAF*KTLPIP
Trigger: AGGGATCGGAAGAGTCTTCAAAAACGCACTGCAAGA...TGATGCCCTAACTTGGAAGGTTGTTCTAGGGACAGGCCGGGCAGTGTCCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTATTGTATGGTGGGGGCTaGCGCTCGCTCTCCTGTGTT +
Preference number: 5 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLLYGGG*RSLSCV
Trigger: AACACAGGAGAGCGAGCGCAAGCCCCCACCATACAA...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATTCTGTGGGCTTGCAGTaGCACTTAGGGATTTCTGAA +
Preference number: 5 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYSVGLQ*HLGISE
Trigger: TTCAGAAATCCCTAAGTGCAACTGCAAGCCCACAGA...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCTCTGTCTTGATGATCTaGGTCTCTGGGTACTGGCGC +
Preference number: 5 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLSVLMI*VSGYWR
Trigger: GCGCCAGTACCCAGAGACCAAGATCATCAAGACAGA...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGGGTCGTCGAGGTCTTaGGTCTATCCCCGAGGAATC +
Preference number: 5 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLGSSRS*VYPRGI
Trigger: GATTCCTCGGGGATAGACCAAAGACCTCGACGACCC...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp GACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACACATTTCAGAGGAGAGGGTCGTCGAGGTCTTaGGTCTATCCCCGAGGAATC +
Preference number: 5 (lower is better)
Translates to: DEFLATLGKSLRYTFQRRGSSRS*VYPRGI
Trigger: GATTCCTCGGGGATAGACCAAAGACCTCGACGACCC...TCTCCTCTGAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp GGCTTCCCTCTGAAGCTTAATTTCACGAAAACGAGCTTCAGCTTCTTGCAGTGCGCCTTGGTGCAGAACTaGCGGTCACACAGCACCAGC +
Preference number: 5 (lower is better)
Translates to: GFPLKLNFTKTSFSFLQCALVQN*RSHSTS
Trigger: GCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGGC...GCACTGCAAGAAGCTGAAGCTCGTTTTCGTGAAATTAAGCTTCAGAGGGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp TTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCCGCGTAAACTACACGTaGAAAGTGGACGTGTTATTG +
Preference number: 5 (lower is better)
Translates to: FVFRLHFRMGTPRARLPGRVNYT*KVDVLL
Trigger: CAATAACACGTCCACTTTCAACGTGTAGTTTACGCG...GCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CAA 90 bp CATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTACGCGTAAACTACACGTaGAAAGTGGACGTGTTATTG +
Preference number: 5 (lower is better)
Translates to: HFKLPIRTHPPVGAHGWVRVNYT*KVDVLL
Trigger: CAATAACACGTCCACTTTCAACGTGTAGTTTACGCG...TACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp TGGTGTCGCTTCCCCTTCCGAGCAGTGAAGTGGGCAGTGCAGATGATGCTGTTGAGGAATCCTGAGGGATaGGGGCGGTTTTTGTGTTTT +
Preference number: 5 (lower is better)
Translates to: WCRFPFRAVKWAVQMMLLRNPEG*GRFLCF
Trigger: AAAACACAAAAACCGCCCCAATCCCTCAGGATTCCT...CAACAGCATCATCTGCACTGCCCACTTCACTGCTCGGAAGGGGAAGCGACACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp TCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGGGCTGTCCGAGACCATAGGATCAAGATATTaGGCAACTGACAGTCATTTG +
Preference number: 5 (lower is better)
Translates to: SALSYGDSEGSSPGLSETIGSRY*ATDSHL
Trigger: CAAATGACTGTCAGTTGCCAAATATCTTGATCCTAT...GGTCTCGGACAGCCCGGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CAA 90 bp CCACCCCCAGGACCGCACCTCTCAGTAGGTGCCCTGGCAGAGGGCACATGTGATATAGGATCAAGATATTaGGCAACTGACAGTCATTTG +
Preference number: 5 (lower is better)
Translates to: PPPGPHLSVGALAEGTCDIGSRY*ATDSHL
Trigger: CAAATGACTGTCAGTTGCCAAATATCTTGATCCTAT...ATCACATGTGCCCTCTGCCAGGGCACCTACTGAGAGGTGCGGTCCTGGGGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp TTCCAGTCAGTGCTCAGGGAGGCGTGGGACCCTGCAGGGCCACACACCCCTGAAATAGGATCAAGATATTaGGCAACTGACAGTCATTTG +
Preference number: 5 (lower is better)
Translates to: FQSVLREAWDPAGPHTPEIGSRY*ATDSHL
Trigger: CAAATGACTGTCAGTTGCCAAATATCTTGATCCTAT...TTCAGGGGTGTGTGGCCCTGCAGGGTCCCACGCCTCCCTGAGCACTGACTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp CACAGGAGCAGCAAGCTTGCTCCTGACAGCATGGCTCTCACACAGCATCCTCCCCTCTTTGGACACCATTaGGTCATTTGCAGGGTTTTG +
Preference number: 5 (lower is better)
Translates to: HRSSKLAPDSMALTQHPPLFGHH*VICRVL
Trigger: CAAAACCCTGCAAATGACCAAATGGTGTCCAAAGAG...GGGAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCACAGATATATAAAGGCTaGATGGCCCAATGGCTCTCA +
Preference number: 5 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPQIYKG*MAQWLS
Trigger: TGAGAGCCATTGGGCCATCAAGCCTTTATATATCTG...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp CGGCTCGGCAACCACCCGCAAGGAGAGCAAAGTACGAGGGCGTCCCACAGCAAGCTAATTACAGTCAATTaGACATCACTGCCAGGTAAA +
Preference number: 5 (lower is better)
Translates to: RLGNHPQGEQSTRASHSKLITVN*TSLPGK
Trigger: TTTACCTGGCAGTGATGTCAAATTGACTGTAATTAG...CTTGCTGTGGGACGCCCTCGTACTTTGCTCTCCTTGCGGGTGGTTGCCGAGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp CACAGGAGCAGCAAGCTTGCTCCTGACAGCATGGCTCTCACACAGCATCCTCCCAAGGAAGCATGCTCCTaGCTCATCCAGTATAGGAAT +
Preference number: 5 (lower is better)
Translates to: HRSSKLAPDSMALTQHPPKEACS*LIQYRN
Trigger: ATTCCTATACTGGATGAGCAAGGAGCATGCTTCCTT...GGGAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS CCA 90 bp CACCTCGCAGCTCGGAGTCTTCCCGTTGGCACTGCCGAGGATTTCTaGTGCCTGCTTCATCTTTATGCACTTTACAACACTCTGAACAGA +
Preference number: 5 (lower is better)
Translates to: HLAARSLPVGTAEDF*CLLHLYALYNTLNR
Trigger: TCTGTTCAGAGTGTTGTAAAGTGCATAAAGATGAAGCAGGCACCAGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGAGCTGCGAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000398261.6
ENST00000420906.6
ENST00000503128.5
ENST00000508355.5
ENST00000508803.6
ENST00000509115.5
ENST00000512700.2
ENST00000514045.5
ENST00000515806.1
ENST00000677559.1
ENST00000678714.1
CDS CCA 90 bp TTTCCCGTAAGGCTTATTCACCTGCAGGGAAGGAGTAAGCTGTCTTaGTCCACACATGAGAGCCTTCCGAATACCCTTGCACACCCACCA +
Preference number: 5 (lower is better)
Translates to: FPVRLIHLQGRSKLS*STHESLPNTLAHPP
Trigger: TGGTGGGTGTGCAAGGGTATTCGGAAGGCTCTCATGTGTGGACCAAGACAGCTTACTCCTTCCCTGCAGGTGAATAAGCCTTACGGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679039.1
CDS-3UTR CAA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACGAAAGGGGACTCTGCTaGATGCTAAATTCCATCCAG +
Preference number: 5 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDERGLC*MLNSIQ
Trigger: CTGGATGGAATTTAGCATCAAGCAGAGTCCCCTTTC...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CAGGGCCGCATCAGTAAACACACACTTCAGTCGGTGGTGATTTGTGAAATAGGTCTCGGAGTCTTCCCGTaGGCACTGCCGAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: QGRISKHTLQSVVICEIGLGVFP*ALPRIS
Trigger: AGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGAG...ACCTATTTCACAAATCACCACCGACTGAAGTGTGTGTTTACTGATGCGGCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp TGGCACACATACTCCTTTTTGGCAGTCACTCCTCGCTCAGACTTTTTGGATGAGGACTCAAAACGCAGTTaGGCATCGTGTGCGCCGGGT +
Preference number: 5 (lower is better)
Translates to: WHTYSFLAVTPRSDFLDEDSKRS*ASCAPG
Trigger: ACCCGGCGCACACGATGCCAAACTGCGTTTTGAGTC...CTCATCCAAAAAGTCTGAGCGAGGAGTGACTGCCAAAAAGGAGTATGTGTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CAA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATCTGTTCCTTCTCGCCTaGTTTTCTGGTTTTTGTCCA +
Preference number: 5 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYLFLLA*FSGFCP
Trigger: TGGACAAAAACCAGAAAACAAGGCGAGAAGGAACAG...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CTCCGCTCCTCTAGGATGAGCCCACTCCTGGCATCTGAAGTGGGACAATGCTGCACCAAATCACCAACGTaGTATTTCAACAGGTGGTCT +
Preference number: 5 (lower is better)
Translates to: LRSSRMSPLLASEVGQCCTKSPT*YFNRWS
Trigger: AGACCACCTGTTGAAATACAACGTTGGTGATTTGGT...GCAGCATTGTCCCACTTCAGATGCCAGGAGTGGGCTCATCCTAGAGGAGCGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp ATCCTGCAACATTTGAGCAGAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATAGCCTCCTTGGCTACTaGAGGGTTGAGATGAAGCTG +
Preference number: 5 (lower is better)
Translates to: ILQHLSRANRGTQPALSHSLLGY*RVEMKL
Trigger: CAGCTTCATCTCAACCCTCAAGTAGCCAAGGAGGCT...ATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTCTGCTCAAATGTTGCAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp CGACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATATACGCAGAGCTACACAGTTaGGCCCTCCGCCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: RPRYTGLMHYSKSKPSIYAELHS*ALRLLF
Trigger: GAAGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTGC...GTATATCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CAA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCTTCCGAAGACTGTGCTaGTCCGTCCTGAGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSFRRLC*SVLSLF
Trigger: GAAAAGACTCAGGACGGACAAGCACAGTCTTCGGAA...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp AGGTCTCGACCACCACTGAGTTGGTTTGAGTCCCTGCAGAAAATCCCACTCGGATTCCGAAGACTGTGCTaGTCCGTCCTGAGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: RSRPPLSWFESLQKIPLGFRRLC*SVLSLF
Trigger: GAAAAGACTCAGGACGGACAAGCACAGTCTTCGGAA...TCCGAGTGGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCGAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CAA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACCTTGTTCTGGCCGTTTaGTCAGTGATTGTGTCTCTC +
Preference number: 5 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDLVLAV*SVIVSL
Trigger: GAGAGACACAATCACTGACAAAACGGCCAGAACAAG...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCTGGCCTTGTAAGAGCTaGTTCTGGCCGTTTTGTCAG +
Preference number: 5 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLWPCKS*FWPFCQ
Trigger: CTGACAAAACGGCCAGAACAAGCTCTTACAAGGCCA...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCTCCCCTGACGAAGGAGATGAACTTTaGCTAAACCCAAGAGCTGAA +
Preference number: 5 (lower is better)
Translates to: VFSRSGQLPRPGRLSSPDEGDEL*LNPRAE
Trigger: TTCAGCTCTTGGGTTTAGCAAAAGTTCATCTCCTTC...GTCAGGGGAGCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CAA 90 bp GGTGACTCTCCAGGGTCTCTGCAGAGCTACACAGTTTGGCCCTCCGCCTTCTCTGAAGGAGATGAACTTTaGCTAAACCCAAGAGCTGAA +
Preference number: 5 (lower is better)
Translates to: GDSPGSLQSYTVWPSAFSEGDEL*LNPRAE
Trigger: TTCAGCTCTTGGGTTTAGCAAAAGTTCATCTCCTTC...AGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTGCAGAGACCCTGGAGAGTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR CAA 90 bp CATGCACTCCTCCTCGTCGATCAGCTCCCCAACGTACTCGTTAACAAATTCTCCCTTGGGTTTGAAGGGTaGGAAGCATGGCAGCTCACA +
Preference number: 5 (lower is better)
Translates to: HALLLVDQLPNVLVNKFSLGFEG*EAWQLT
Trigger: TGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAAG...GGAGAATTTGTTAACGAGTACGTTGGGGAGCTGATCGACGAGGAGGAGTGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTATTGACGGCCTTGGGTTaGAAGGGTTGGAAGCATGGC +
Preference number: 5 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLLTALG*KGWKHG
Trigger: GCCATGCTTCCAACCCTTCAAACCCAAGGCCGTCAA...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp AATGATCACAATGGCAGTTTCGAGGAATCCAGGGTCAGTCCTCACACGGGCCTCTACCTTTTGACGGCCTaGGGTTTGAAGGGTTGGAAG +
Preference number: 5 (lower is better)
Translates to: NDHNGSFEESRVSPHTGLYLLTA*GLKGWK
Trigger: CTTCCAACCCTTCAAACCCAAGGCCGTCAAAAGGTA...GAGGCCCGTGTGAGGACTGACCCTGGATTCCTCGAAACTGCCATTGTGATCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
CDS-3UTR CAA 90 bp TGGTGTCGCTTCCCCTTCCGAGCAGTGAAGTGGGCAGTGCAGATGATGCTGTTGGCATCATTTTACCTTTaGACGGCCTTGGGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: WCRFPFRAVKWAVQMMLLASFYL*TALGLK
Trigger: CTTCAAACCCAAGGCCGTCAAAAGGTAAAATGATGC...CAACAGCATCATCTGCACTGCCCACTTCACTGCTCGGAAGGGGAAGCGACACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CAA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGCATCATTTTACCTTTaGACGGCCTTGGGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYASFYL*TALGLK
Trigger: CTTCAAACCCAAGGCCGTCAAAAGGTAAAATGATGC...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
CDS-3UTR CAA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACTCTTGCAGTGCGTTTTaGAAGACTCTTCCGATCCCT +
Preference number: 5 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDSCSAF*KTLPIP
Trigger: AGGGATCGGAAGAGTCTTCAAAAACGCACTGCAAGA...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CATTGCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTTCTTGCAGTGCGTTTTaGAAGACTCTTCCGATCCCT +
Preference number: 5 (lower is better)
Translates to: HCCHHLQGQLLTRMEKKRSCSAF*KTLPIP
Trigger: AGGGATCGGAAGAGTCTTCAAAAACGCACTGCAAGA...ACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACACGAGCTTCAGCTTCTaGCAGTGCGTTTTTGAAGAC +
Preference number: 5 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDTSFSF*QCVFED
Trigger: GTCTTCAAAAACGCACTGCAAGAAGCTGAAGCTCGT...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCAACGAGCTTCAGCTTCTaGCAGTGCGTTTTTGAAGAC +
Preference number: 5 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPTSFSF*QCVFED
Trigger: GTCTTCAAAAACGCACTGCAAGAAGCTGAAGCTCGT...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGACCTTTGCCATCTGTCTaGATGATCTTGGTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRPLPSV*MILVSG
Trigger: CCCAGAGACCAAGATCATCAAGACAGATGGCAAAGG...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGTTCTCGTGTGCGTGCTaGATTCTCGCCATGCACTCC +
Preference number: 5 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLFSCAC*ILAMHS
Trigger: GGAGTGCATGGCGAGAATCAAGCACGCACACGAGAA...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp TGCTGTTTTGACGTAAGCATTGGTAGTCCCTTACCTGCCGGAAGGGATCTTTTGGGGTCGTCGAGGTCTTaGGTCTATCCCCGAGGAATC +
Preference number: 5 (lower is better)
Translates to: CCFDVSIGSPLPAGRDLLGSSRS*VYPRGI
Trigger: GATTCCTCGGGGATAGACCAAAGACCTCGACGACCC...CAAAAGATCCCTTCCGGCAGGTAAGGGACTACCAATGCTTACGTCAAAACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACGAGTGGGAGGGAACCTaGACATTCGGAGAAATTCAA +
Preference number: 5 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDEWEGT*TFGEIQ
Trigger: TTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTC...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp CTTGCCAAGGCCCAGGCAGGACAGGTGGTAGGCCTTGGTGCAGAACTTGCGGTCAAAGTGGACGTGTTATaGGCATTTCATTCAAATCCA +
Preference number: 5 (lower is better)
Translates to: LAKAQAGQVVGLGAELAVKVDVL*AFHSNP
Trigger: TGGATTTGAATGAAATGCCAATAACACGTCCACTTT...GACCGCAAGTTCTGCACCAAGGCCTACCACCTGTCCTGCCTGGGCCTTGGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp CATTGCTGCCACCACCTGCAGGGCCAGCTTCTCACTAGGATGGAAAAGAAGCGTAGGAATCCTGAGGGATaGGGGCGGTTTTTGTGTTTT +
Preference number: 5 (lower is better)
Translates to: HCCHHLQGQLLTRMEKKRRNPEG*GRFLCF
Trigger: AAAACACAAAAACCGCCCCAATCCCTCAGGATTCCT...ACGCTTCTTTTCCATCCTAGTGAGAAGCTGGCCCTGCAGGTGGTGGCAGCAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp AAACCAGGAGATGGTCCTCTCGGAAAACTCCGCTCCTCTAGGATGAGCCCACTCCTGTCTGCGAAGGACTaGAGGACAATGACAAAACTG +
Preference number: 5 (lower is better)
Translates to: KPGDGPLGKLRSSRMSPLLSAKD*RTMTKL
Trigger: CAGTTTTGTCATTGTCCTCAAGTCCTTCGCAGACAG...GAGTGGGCTCATCCTAGAGGAGCGGAGTTTTCCGAGAGGACCATCTCCTGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp AGGGCTGGGGGTGAGTCTCTGAGAACAGAGGAAGTCTCCACTCCCAGAGCACCAGTACCTCCACAGTGTTaGCGTTTACAAATGACAACA +
Preference number: 5 (lower is better)
Translates to: RAGGESLRTEEVSTPRAPVPPQC*RLQMTT
Trigger: TGTTGTCATTTGTAAACGCAAACACTGTGGAGGTAC...TGGTGCTCTGGGAGTGGAGACTTCCTCTGTTCTCAGAGACTCACCCCCAGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp ATCCTGCAACATTTGAGCAGAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACTCGGAGAAGCCATTaGTGGAGGTGGCACATTCAC +
Preference number: 5 (lower is better)
Translates to: ILQHLSRANRGTQPALSHTRRSH*WRWHIH
Trigger: GTGAATGTGCCACCTCCACAAATGGCTTCTCCGAGT...ATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTCTGCTCAAATGTTGCAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp AATGATCACAATGGCAGTTTCGAGGAATCCAGGGTCAGTCCTCACACGGGCCTCTCTCTTTTGACGGCCTaGGGTTTGAAGGGTTGGAAG +
Preference number: 5 (lower is better)
Translates to: NDHNGSFEESRVSPHTGLSLLTA*GLKGWK
Trigger: CTTCCAACCCTTCAAACCCAAGGCCGTCAAAAGAGA...GAGGCCCGTGTGAGGACTGACCCTGGATTCCTCGAAACTGCCATTGTGATCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677559.1
CDS TCA 90 bp GTTGTGTTCCTTGTTGTACTGAAAACCGTGGTGTCCTGTGTCCACTaGGACAGGACACCCCCAAACCAGTCCTGTTTCTCTTGCTCACAG +
Preference number: 5 (lower is better)
Translates to: VVFLVVLKTVVSCVH*DRTPPNQSCFSCSQ
Trigger: CTGTGAGCAAGAGAAACAGGACTGGTTTGGGGGTGTCCTGTCTCAGTGGACACAGGACACCACGGTTTTCAGTACAACAAGGAACACAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677895.1
CDS GCA 90 bp CTCGCAGCTCGGAGTCTTCCCGTTGGCACTGCCGAGGATTTCTGGTaGCTGCTTCATCTTTATGCACTTTACAACACTCTGAACAGAAAG +
Preference number: 5 (lower is better)
Translates to: LAARSLPVGTAEDFW*LLHLYALYNTLNRK
Trigger: CTTTCTGTTCAGAGTGTTGTAAAGTGCATAAAGATGAAGCAGGCACCAGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGAGCTGCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000398261.6
ENST00000420906.6
ENST00000503128.5
ENST00000508355.5
ENST00000508803.6
ENST00000509115.5
ENST00000512700.2
ENST00000514045.5
ENST00000515806.1
ENST00000677559.1
ENST00000678714.1
CDS-3UTR CAA 90 bp AATGATCACAATGGCAGTTTCGAGGAATCCAGGGTCAGTCCTCACACGGGCCTCGAAAGGGGACTCTGCTaGATGCTAAATTCCATCCAG +
Preference number: 5 (lower is better)
Translates to: NDHNGSFEESRVSPHTGLERGLC*MLNSIQ
Trigger: CTGGATGGAATTTAGCATCAAGCAGAGTCCCCTTTC...GAGGCCCGTGTGAGGACTGACCCTGGATTCCTCGAAACTGCCATTGTGATCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CAGGGCCGCATCAGTAAACACACACTTCAGTCGGTGGTGATTTGTGAAATAGGTCTGGAGAGCTGGGCTTaGCTGAGGAACACAGAACAC +
Preference number: 5 (lower is better)
Translates to: QGRISKHTLQSVVICEIGLESWA*LRNTEH
Trigger: GTGTTCTGTGTTCCTCAGCAAAGCCCAGCTCTCCAG...ACCTATTTCACAAATCACCACCGACTGAAGTGTGTGTTTACTGATGCGGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp AACTGTAAAGCAGCCCCAGTCCCACCATCCGTGAACAGGTCTCGACCACCACTGACCAAATCACCAACGTaGTATTTCAACAGGTGGTCT +
Preference number: 5 (lower is better)
Translates to: NCKAAPVPPSVNRSRPPLTKSPT*YFNRWS
Trigger: AGACCACCTGTTGAAATACAACGTTGGTGATTTGGT...CAGTGGTGGTCGAGACCTGTTCACGGATGGTGGGACTGGGGCTGCTTTACAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CAA 90 bp TGGTGTCGCTTCCCCTTCCGAGCAGTGAAGTGGGCAGTGCAGATGATGCTGTTGACCAAATCACCAACGTaGTATTTCAACAGGTGGTCT +
Preference number: 5 (lower is better)
Translates to: WCRFPFRAVKWAVQMMLLTKSPT*YFNRWS
Trigger: AGACCACCTGTTGAAATACAACGTTGGTGATTTGGT...CAACAGCATCATCTGCACTGCCCACTTCACTGCTCGGAAGGGGAAGCGACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCTCTTCTCTCACAGACTaGGGGTTTTCAGCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSSSLTD*GFSAAS
Trigger: AGAAGCTGCTGAAAACCCCAAGTCTGTGAGAGAAGA...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGATCTTCTCTCACAGACTaGGGGTTTTCAGCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRSSLTD*GFSAAS
Trigger: AGAAGCTGCTGAAAACCCCAAGTCTGTGAGAGAAGA...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGTTCCGAAGACTGTGCTaGTCCGTCCTGAGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKFRRLC*SVLSLF
Trigger: GAAAAGACTCAGGACGGACAAGCACAGTCTTCGGAA...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp GGCCTCGACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGACTTGTTCTGGCCGTTTaGTCAGTGATTGTGTCTCTC +
Preference number: 5 (lower is better)
Translates to: GLDPATLASCITLNQSLRLVLAV*SVIVSL
Trigger: GAGAGACACAATCACTGACAAAACGGCCAGAACAAG...TCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTCGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CAA 90 bp TGGTGTCGCTTCCCCTTCCGAGCAGTGAAGTGGGCAGTGCAGATGATGCTGTTGCGCTTAACATCTGTCTaGCTCTCTTTACACACGAAA +
Preference number: 5 (lower is better)
Translates to: WCRFPFRAVKWAVQMMLLRLTSV*LSLHTK
Trigger: TTTCGTGTGTAAAGAGAGCAAGACAGATGTTAAGCG...CAACAGCATCATCTGCACTGCCCACTTCACTGCTCGGAAGGGGAAGCGACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp TCCTCGTCGATCAGCTCCCCAACGTACTCGTTAACAAATTCTCCCTTTCTGATGTTGACGGCCTTGGGTTaGAAGGGTTGGAAGCATGGC +
Preference number: 5 (lower is better)
Translates to: SSSISSPTYSLTNSPFLMLTALG*KGWKHG
Trigger: GCCATGCTTCCAACCCTTCAAACCCAAGGCCGTCAA...CATCAGAAAGGGAGAATTTGTTAACGAGTACGTTGGGGAGCTGATCGACGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp GGCTTCCCTCTGAAGCTTAATTTCACGAAAACGAGCTTCAGCTTCTTGCAGTGCTTGACGGCCTTGGGTTaGAAGGGTTGGAAGCATGGC +
Preference number: 5 (lower is better)
Translates to: GFPLKLNFTKTSFSFLQCLTALG*KGWKHG
Trigger: GCCATGCTTCCAACCCTTCAAACCCAAGGCCGTCAA...GCACTGCAAGAAGCTGAAGCTCGTTTTCGTGAAATTAAGCTTCAGAGGGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp GGCTTCCCTCTGAAGCTTAATTTCACGAAAACGAGCTTCAGCTTCTTGCAGTGCTTCACCTTGATGTGCTaGTATGGTGGGGGCTTGCGC +
Preference number: 5 (lower is better)
Translates to: GFPLKLNFTKTSFSFLQCFTLMC*YGGGLR
Trigger: GCGCAAGCCCCCACCATACAAGCACATCAAGGTGAA...GCACTGCAAGAAGCTGAAGCTCGTTTTCGTGAAATTAAGCTTCAGAGGGAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp GTAGTTCCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTCCCAGCTTCACCTTGATGTGCTaGTATGGTGGGGGCTTGCGC +
Preference number: 5 (lower is better)
Translates to: VVPKFHPNDILEVQLLPSFTLMC*YGGGLR
Trigger: GCGCAAGCCCCCACCATACAAGCACATCAAGGTGAA...GCTGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGGAACTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp AGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGATCTGTGGGCTTGCAGTaGCACTTAGGGATTTCTGAA +
Preference number: 5 (lower is better)
Translates to: RWALHTPGFRCQDRQTLRSVGLQ*HLGISE
Trigger: TTCAGAAATCCCTAAGTGCAACTGCAAGCCCACAGA...TCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp AGAGTGGGAGGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGCCTTTGCCATCTGTCTaGATGATCTTGGTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: RVGGNLDIRRNSSVAVTLPLPSV*MILVSG
Trigger: CCCAGAGACCAAGATCATCAAGACAGATGGCAAAGG...CAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CAGGGCCGCATCAGTAAACACACACTTCAGTCGGTGGTGATTTGTGAAATAGGTTTCTCGTGTGCGTGCTaGATTCTCGCCATGCACTCC +
Preference number: 5 (lower is better)
Translates to: QGRISKHTLQSVVICEIGFSCAC*ILAMHS
Trigger: GGAGTGCATGGCGAGAATCAAGCACGCACACGAGAA...ACCTATTTCACAAATCACCACCGACTGAAGTGTGTGTTTACTGATGCGGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp TCCACTGAGTTATCAACGGGTATTGTAGAGACATTCAAAGTTAGTGTTACTTGCTTCCCGAAGGGCCGCTaGCCAAGGCCCAGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: STELSTGIVETFKVSVTCFPKGR*PRPRQD
Trigger: GTCCTGCCTGGGCCTTGGCAAGCGGCCCTTCGGGAA...GCAAGTAACACTAACTTTGAATGTCTCTACAATACCCGTTGATAACTCAGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATGCCGCCTGGCGCTATTaGCCCTCTGTGACTCTCCGC +
Preference number: 5 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNAAWRY*PSVTLR
Trigger: GCGGAGAGTCACAGAGGGCAAATAGCGCCAGGCGGC...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp TTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATGGAAAGTGGACGTGTTATaGGCATTTCATTCAAATCCA +
Preference number: 5 (lower is better)
Translates to: FKLPIRTHPPVGAHGWVWKVDVL*AFHSNP
Trigger: TGGATTTGAATGAAATGCCAATAACACGTCCACTTT...CCATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp ATCCTGCAACATTTGAGCAGAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATAACCTGCACAGGCTTTaGTGTAGCCGTAGCCACATA +
Preference number: 5 (lower is better)
Translates to: ILQHLSRANRGTQPALSHNLHRL*CSRSHI
Trigger: TATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTT...ATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTCTGCTCAAATGTTGCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp CACAGGAGCAGCAAGCTTGCTCCTGACAGCATGGCTCTCACACAGCATCCTCCCTTAGCACGTTTCCACTaGGAGAGATTTCCTACATTA +
Preference number: 5 (lower is better)
Translates to: HRSSKLAPDSMALTQHPPLARFH*ERFPTL
Trigger: TAATGTAGGAAATCTCTCCAAGTGGAAACGTGCTAA...GGGAGGATGCTGTGTGAGAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp AACAAATTCTCCCTTTCTGATGTCCCTCTTGGCGACCAGGCCCCACCCTTTGCCAAGACTCTATCTCTTTaGACGGCCTTGGGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: NKFSLSDVPLGDQAPPFAKTLSL*TALGLK
Trigger: CTTCAAACCCAAGGCCGTCAAAAGAGATAGAGTCTT...GGCAAAGGGTGGGGCCTGGTCGCCAAGAGGGACATCAGAAAGGGAGAATTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677559.1
CDS GCA 90 bp GACCTCATCCCTGTGTTTTTGACAGAAGACCAAAAACTGGGATGCTaGATCTCCCTTCCTGCTTCGTGGCATGGAGACTGTGGTCTTCTT +
Preference number: 5 (lower is better)
Translates to: DLIPVFLTEDQKLGC*ISLPASWHGDCGLL
Trigger: AAGAAGACCACAGTCTCCATGCCACGAAGCAGGAAGGGAGATGCAGCATCCCAGTTTTTGGTCTTCTGTCAAAAACACAGGGATGAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508355.5
CDS GCA 90 bp ACTGACCTCATCCCTGTGTTTTTGACAGAAGACCAAAAACTGGGATaGTGCATCTCCCTTCCTGCTTCGTGGCATGGAGACTGTGGTCTT +
Preference number: 5 (lower is better)
Translates to: TDLIPVFLTEDQKLG*CISLPASWHGDCGL
Trigger: AAGACCACAGTCTCCATGCCACGAAGCAGGAAGGGAGATGCAGCATCCCAGTTTTTGGTCTTCTGTCAAAAACACAGGGATGAGGTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508355.5
CDS CCA 90 bp TTCTCCATTAAACACCCGGGAAGTAAGATCTTTCAGCTTGTCGGCTaGAATAAAGGGCAGGGCGTCGTGGCCGTTAAACTTCTGCATGAC +
Preference number: 5 (lower is better)
Translates to: FSIKHPGSKIFQLVG*NKGQGVVAVKLLHD
Trigger: GTCATGCAGAAGTTTAACGGCCACGACGCCCTGCCCTTTATTCCAGCCGACAAGCTGAAAGATCTTACTTCCCGGGTGTTTAATGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000398261.6
ENST00000420906.6
ENST00000503128.5
ENST00000508355.5
ENST00000508803.6
ENST00000509115.5
ENST00000512700.2
ENST00000514045.5
ENST00000515806.1
ENST00000677559.1
ENST00000678714.1
CDS-3UTR CAA 90 bp GTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCTCTGGAGAGCTGGGCTTaGCTGAGGAACACAGAACAC +
Preference number: 5 (lower is better)
Translates to: VCTMIRHLQQHPGILHHSLESWA*LRNTEH
Trigger: GTGTTCTGTGTTCCTCAGCAAAGCCCAGCTCTCCAG...AGAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000678714.1
CDS-3UTR CAA 90 bp TCTCGACCACCACTGAGTTGGTTTGAGTCCCTGCAGAAAATCCCACTCGGAGGACTGTTCCTTCTCGCCTaGTTTTCTGGTTTTTGTCCA +
Preference number: 5 (lower is better)
Translates to: SRPPLSWFESLQKIPLGGLFLLA*FSGFCP
Trigger: TGGACAAAAACCAGAAAACAAGGCGAGAAGGAACAG...TCCTCCGAGTGGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CAA 90 bp AGGTCTCGACCACCACTGAGTTGGTTTGAGTCCCTGCAGAAAATCCCACTCGGATTCAACAGGTGGTCTTaGTCTCTTCCAGTGTTTGGA +
Preference number: 5 (lower is better)
Translates to: RSRPPLSWFESLQKIPLGFNRWS*SLPVFG
Trigger: TCCAAACACTGGAAGAGACAAAGACCACCTGTTGAA...TCCGAGTGGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCGAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CAA 90 bp TGCACACGCCGGGGTTTAGATGTCAAGACAGACAAACACTGCGAAGGGGACCCAGAAGGAGATGAACTTTaGCTAAACCCAAGAGCTGAA +
Preference number: 5 (lower is better)
Translates to: CTRRGLDVKTDKHCEGDPEGDEL*LNPRAE
Trigger: TTCAGCTCTTGGGTTTAGCAAAAGTTCATCTCCTTC...TGGGTCCCCTTCGCAGTGTTTGTCTGTCTTGACATCTAAACCCCGGCGTGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp TCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTCCCGACAGATACTTCAGTTaGTGTTTCGTCTGCACTTTC +
Preference number: 5 (lower is better)
Translates to: SVCVSSALSYGDSEGSSPDRYFS*CFVCTF
Trigger: GAAAGTGCAGACGAAACACAAACTGAAGTATCTGTC...GGGAGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR CAA 90 bp GACTGCATCTTCCATCACCAGACCCACAGAGTGCTGAGATGGAAGCCACTCTGGCGCTTAACATCTGTCTaGCTCTCTTTACACACGAAA +
Preference number: 5 (lower is better)
Translates to: DCIFHHQTHRVLRWKPLWRLTSV*LSLHTK
Trigger: TTTCGTGTGTAAAGAGAGCAAGACAGATGTTAAGCG...CCAGAGTGGCTTCCATCTCAGCACTCTGTGGGTCTGGTGATGGAAGATGCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp TGCTGTTTTGACGTAAGCATTGGTAGTCCCTTACCTGCCGGAAGGGATCTTTTGCTTGGGTTTGAAGGGTaGGAAGCATGGCAGCTCACA +
Preference number: 5 (lower is better)
Translates to: CCFDVSIGSPLPAGRDLLLGFEG*EAWQLT
Trigger: TGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAAG...CAAAAGATCCCTTCCGGCAGGTAAGGGACTACCAATGCTTACGTCAAAACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CATGCACTCCTCCTCGTCGATCAGCTCCCCAACGTACTCGTTAACAAATTCTCCTTTGGGGGAACATTTTaGGGATGGCAAACTTCTGCC +
Preference number: 5 (lower is better)
Translates to: HALLLVDQLPNVLVNKFSFGGTF*GWQTSA
Trigger: GGCAGAAGTTTGCCATCCCAAAAATGTTCCCCCAAA...GGAGAATTTGTTAACGAGTACGTTGGGGAGCTGATCGACGAGGAGGAGTGCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATGCCTTGGTGCAGAACTaGCGGTCACACAGCACCAGC +
Preference number: 5 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHALVQN*RSHSTS
Trigger: GCTGGTGCTGTGTGACCGCAAGTTCTGCACCAAGGC...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGGAGTGGGAGGGAACCTaGACATTCGGAGAAATTCAA +
Preference number: 5 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSEEWEGT*TFGEIQ
Trigger: TTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTC...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp GCTGATGTTCAGGAAGTCACCACGTCCTCAGAACAAAGCTGGGCAGGGCCGAGAATTAATGATGGAGGATaGAAGCTGATGTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: ADVQEVTTSSEQSWAGPRINDGG*KLMFRK
Trigger: CTTCCTGAACATCAGCTTCAATCCTCCATCATTAAT...TCTCGGCCCTGCCCAGCTTTGTTCTGAGGACGTGGTGACTTCCTGAACATCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp AGAGTGGGAGGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAATCCTGAGGGATaGGGGCGGTTTTTGTGTTTT +
Preference number: 5 (lower is better)
Translates to: RVGGNLDIRRNSSVAVTLRNPEG*GRFLCF
Trigger: AAAACACAAAAACCGCCCCAATCCCTCAGGATTCCT...CAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp TCGTCTTCTAACCTGCACAGGCTTTTGTGTAGCCGTAGCCACATAGCCCCAAGCTGTATCCTGCAACATTaGAGCAGAGCCAATAGAGGA +
Preference number: 5 (lower is better)
Translates to: SSSNLHRLLCSRSHIAPSCILQH*SRANRG
Trigger: TCCTCTATTGGCTCTGCTCAAATGTTGCAGGATACA...GCTTGGGGCTATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTTAGAAGACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp GAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACAGTCCAGCACCCTAAAGATGTCATGCTGCTCTTaGGACACCATTTGGTCATTT +
Preference number: 5 (lower is better)
Translates to: EPIEEPNQPSAIQSSTLKMSCCS*DTIWSF
Trigger: AAATGACCAAATGGTGTCCAAAGAGCAGCATGACAT...CTTTAGGGTGCTGGACTGTATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp CCCTGCAGAAAATCCCACTCGGAGGAGTGGTCGCTGAGGATTCAGAGTGGCAAGTTCTGTGGCTATTTGTaGTTTTTGGCAACGGCAAAA +
Preference number: 5 (lower is better)
Translates to: PCRKSHSEEWSLRIQSGKFCGYL*FLATAK
Trigger: TTTTGCCGTTGCCAAAAACAACAAATAGCCACAGAA...CTTGCCACTCTGAATCCTCAGCGACCACTCCTCCGAGTGGGATTTTCTGCAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CAA 90 bp AGGTCTCGACCACCACTGAGTTGGTTTGAGTCCCTGCAGAAAATCCCACTCGGAACGTTCTGTGGCTATTaGTTGTTTTTGGCAACGGCA +
Preference number: 5 (lower is better)
Translates to: RSRPPLSWFESLQKIPLGTFCGY*LFLATA
Trigger: TGCCGTTGCCAAAAACAACAAATAGCCACAGAACGT...TCCGAGTGGGATTTTCTGCAGGGACTCAAACCAACTCAGTGGTGGTCGAGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS GCA 90 bp CTGGTGTCTGCAACCCGCAGTCTCCACAGAAAAGCAGACAGCTCGTaGCACCACAAGTGTCCAGAATTTTATGCCCAGGTAAATTATCAT +
Preference number: 5 (lower is better)
Translates to: LVSATRSLHRKADSS*HHKCPEFYAQVNYH
Trigger: ATGATAATTTACCTGGGCATAAAATTCTGGACACTTGTGGTGGCACGAGCTGTCTGCTTTTCTGTGGAGACTGCGGGTTGCAGACACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382895.7
ENST00000420906.6
CDS GCA 90 bp AATCCCTTTCATTTCCTGGGACTCAAAACGCAGTTTGGCATCGTGTaGGCCGGGTTCTCCATTAAACACCCGGGAAGTAAGATCTTTCAG +
Preference number: 5 (lower is better)
Translates to: NPFHFLGLKTQFGIV*AGFSIKHPGSKIFQ
Trigger: CTGAAAGATCTTACTTCCCGGGTGTTTAATGGAGAACCCGGCGCACACGATGCCAAACTGCGTTTTGAGTCCCAGGAAATGAAAGGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000398261.6
ENST00000420906.6
ENST00000503128.5
ENST00000508355.5
ENST00000508803.6
ENST00000509115.5
ENST00000512700.2
ENST00000514045.5
ENST00000515806.1
ENST00000677559.1
ENST00000678714.1
CDS GCA 90 bp AGATGCTGCCGTGGAAGCCCGATTTCGCTTCTTCAGTGGTTTACATaGATCAGACAGATTTTTCGTTGCTTCCGAAGACTGTGCTTGTCC +
Preference number: 5 (lower is better)
Translates to: RCCRGSPISLLQWFT*IRQIFRCFRRLCLS
Trigger: GGACAAGCACAGTCTTCGGAAGCAACGAAAAATCTGTCTGATGCATGTAAACCACTGAAGAAGCGAAATCGGGCTTCCACGGCAGCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511904.1
CDS-3UTR CAA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCACTGGAGAGCTGGGCTTaGCTGAGGAACACAGAACAC +
Preference number: 5 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSLESWA*LRNTEH
Trigger: GTGTTCTGTGTTCCTCAGCAAAGCCCAGCTCTCCAG...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp AGAGTGGGAGGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGCTGTTCCTTCTCGCCTaGTTTTCTGGTTTTTGTCCA +
Preference number: 5 (lower is better)
Translates to: RVGGNLDIRRNSSVAVTLLFLLA*FSGFCP
Trigger: TGGACAAAAACCAGAAAACAAGGCGAGAAGGAACAG...CAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp ACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGTCTTTCAACAGGTGGTCTTaGTCTCTTCCAGTGTTTGGA +
Preference number: 5 (lower is better)
Translates to: TSVCVSSALSYGDSEGSSFNRWS*SLPVFG
Trigger: TCCAAACACTGGAAGAGACAAAGACCACCTGTTGAA...AGACGAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CAA 90 bp ATCCTGCAACATTTGAGCAGAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATTTCAACAGGTGGTCTTaGTCTCTTCCAGTGTTTGGA +
Preference number: 5 (lower is better)
Translates to: ILQHLSRANRGTQPALSHFNRWS*SLPVFG
Trigger: TCCAAACACTGGAAGAGACAAAGACCACCTGTTGAA...ATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTCTGCTCAAATGTTGCAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp TTCATCTATGTCTTCTCAAGGTCAGGACAACTGCCTAGGCCAGGGAGACTGAGCTTCAACAGGTGGTCTTaGTCTCTTCCAGTGTTTGGA +
Preference number: 5 (lower is better)
Translates to: FIYVFSRSGQLPRPGRLSFNRWS*SLPVFG
Trigger: TCCAAACACTGGAAGAGACAAAGACCACCTGTTGAA...GCTCAGTCTCCCTGGCCTAGGCAGTTGTCCTGACCTTGAGAAGACATAGATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CAA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCACCAAATCACCAACGTaGTATTTCAACAGGTGGTCT +
Preference number: 5 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLTKSPT*YFNRWS
Trigger: AGACCACCTGTTGAAATACAACGTTGGTGATTTGGT...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp AACAGCAATTCTCATGGTCACCTAACTCATATCAGAATCGGGCCCAGCAGTCAAAGCCTCCTTGGCTACTaGAGGGTTGAGATGAAGCTG +
Preference number: 5 (lower is better)
Translates to: NSNSHGHLTHIRIGPSSQSLLGY*RVEMKL
Trigger: CAGCTTCATCTCAACCCTCAAGTAGCCAAGGAGGCT...TTGACTGCTGGGCCCGATTCTGATATGAGTTAGGTGACCATGAGAATTGCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420906.6
CDS-3UTR CAA 90 bp CCCAATGGGTGTGTGTCAGTGTGGACCTCAAACAGCAATTCTCATGGTCACCTATCTTCTCTCACAGACTaGGGGTTTTCAGCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: PNGCVSVWTSNSNSHGHLSSLTD*GFSAAS
Trigger: AGAAGCTGCTGAAAACCCCAAGTCTGTGAGAGAAGA...TAGGTGACCATGAGAATTGCTGTTTGAGGTCCACACTGACACACACCCATTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420906.6
CDS-3UTR CAA 90 bp AGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGAAGGGCAGAGCTACACAGTTaGGCCCTCCGCCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: RNMMHTMGSMHHLQNVGRAELHS*ALRLLF
Trigger: GAAGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTGC...CCTTCCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CAA 90 bp TGCTGTTTTGACGTAAGCATTGGTAGTCCCTTACCTGCCGGAAGGGATCTTTTGTGGCCTTGTAAGAGCTaGTTCTGGCCGTTTTGTCAG +
Preference number: 5 (lower is better)
Translates to: CCFDVSIGSPLPAGRDLLWPCKS*FWPFCQ
Trigger: CTGACAAAACGGCCAGAACAAGCTCTTACAAGGCCA...CAAAAGATCCCTTCCGGCAGGTAAGGGACTACCAATGCTTACGTCAAAACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CGACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATATACTGGCCTTGTAAGAGCTaGTTCTGGCCGTTTTGTCAG +
Preference number: 5 (lower is better)
Translates to: RPRYTGLMHYSKSKPSIYWPCKS*FWPFCQ
Trigger: CTGACAAAACGGCCAGAACAAGCTCTTACAAGGCCA...GTATATCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CAA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCATTGACGGCCTTGGGTTaGAAGGGTTGGAAGCATGGC +
Preference number: 5 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSLTALG*KGWKHG
Trigger: GCCATGCTTCCAACCCTTCAAACCCAAGGCCGTCAA...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp AGAGTGGGAGGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGGCATCATTTTACCTTTaGACGGCCTTGGGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: RVGGNLDIRRNSSVAVTLASFYL*TALGLK
Trigger: CTTCAAACCCAAGGCCGTCAAAAGGTAAAATGATGC...CAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
CDS-3UTR CAA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATCCAGCCCTGCAGTCATaGCAGAACCAGCTGCCGTCA +
Preference number: 5 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNPALQS*QNQLPS
Trigger: TGACGGCAGCTGGTTCTGCAATGACTGCAGGGCTGG...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp ATTCTGGAAAATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTATTTGGGGGAACATTTTaGGGATGGCAAACTTCTGCC +
Preference number: 5 (lower is better)
Translates to: ILENKVVLEDGHCTRRGLFGGTF*GWQTSA
Trigger: GGCAGAAGTTTGCCATCCCAAAAATGTTCCCCCAAA...TAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATTTTCCAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACACATTTCAGAGGAGAACGAGCTTCAGCTTCTaGCAGTGCGTTTTTGAAGAC +
Preference number: 5 (lower is better)
Translates to: DEFLATLGKSLRYTFQRRTSFSF*QCVFED
Trigger: GTCTTCAAAAACGCACTGCAAGAAGCTGAAGCTCGT...TCTCCTCTGAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACACCTTTGCCATCTGTCTaGATGATCTTGGTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTPLPSV*MILVSG
Trigger: CCCAGAGACCAAGATCATCAAGACAGATGGCAAAGG...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CTTCTTCCCAGCCCTGCAGTCATTGCAGAACCAGCTGCCGTCAGGCATCTCGATAAAGTGGACGTGTTATaGGCATTTCATTCAAATCCA +
Preference number: 5 (lower is better)
Translates to: LLPSPAVIAEPAAVRHLDKVDVL*AFHSNP
Trigger: TGGATTTGAATGAAATGCCAATAACACGTCCACTTT...ATCGAGATGCCTGACGGCAGCTGGTTCTGCAATGACTGCAGGGCTGGGAAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp AGAGTGGGAGGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGCGCGTAAACTACACGTaGAAAGTGGACGTGTTATTG +
Preference number: 5 (lower is better)
Translates to: RVGGNLDIRRNSSVAVTLRVNYT*KVDVLL
Trigger: CAATAACACGTCCACTTTCAACGTGTAGTTTACGCG...CAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp AAGGGGGCAACGCGAAGACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTAATTAATGATGGAGGATaGAAGCTGATGTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: KGATRRRVSSDPWEKPTLINDGG*KLMFRK
Trigger: CTTCCTGAACATCAGCTTCAATCCTCCATCATTAAT...TAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTCTTCGCGTTGCCCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp GACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACACATTTCAGAGGAGAAGGAATCCTGAGGGATaGGGGCGGTTTTTGTGTTTT +
Preference number: 5 (lower is better)
Translates to: DEFLATLGKSLRYTFQRRRNPEG*GRFLCF
Trigger: AAAACACAAAAACCGCCCCAATCCCTCAGGATTCCT...TCTCCTCTGAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp ATTTTAAGCTGCCCATTCGGACACATCCCCCTGTGGGCGCACACGGGTGGGTATATAGGATCAAGATATTaGGCAACTGACAGTCATTTG +
Preference number: 5 (lower is better)
Translates to: ILSCPFGHIPLWAHTGGYIGSRY*ATDSHL
Trigger: CAAATGACTGTCAGTTGCCAAATATCTTGATCCTAT...ATACCCACCCGTGTGCGCCCACAGGGGGATGTGTCCGAATGGGCAGCTTAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp GGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAATGGATAGAGTCTTTACTTaGGGTGACTGCTTATTGAAC +
Preference number: 5 (lower is better)
Translates to: GQVAAAPNSRPALVKGKMDRVFT*GDCLLN
Trigger: GTTCAATAAGCAGTCACCCAAAGTAAAGACTCTATC...CATTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp ATCCTGCAACATTTGAGCAGAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATACACCATTTGGTCATTaGCAGGGTTTTGCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: ILQHLSRANRGTQPALSHTPFGH*QGFAFS
Trigger: GGAGAAAGCAAAACCCTGCAAATGACCAAATGGTGT...ATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTCTGCTCAAATGTTGCAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp ATCCTGCAACATTTGAGCAGAGCCAATAGAGGAACCCAACCAGCCCTCAGCCATCAGATATATAAAGGCTaGATGGCCCAATGGCTCTCA +
Preference number: 5 (lower is better)
Translates to: ILQHLSRANRGTQPALSHQIYKG*MAQWLS
Trigger: TGAGAGCCATTGGGCCATCAAGCCTTTATATATCTG...ATGGCTGAGGGCTGGTTGGGTTCCTCTATTGGCTCTGCTCAAATGTTGCAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGTCACGACATGAAAGGTaGTGTCATGAAACCTCGCTT +
Preference number: 5 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKSRHER*CHETSL
Trigger: AAGCGAGGTTTCATGACACAACCTTTCATGTCGTGA...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp GGCCAGGTGGCTGCTGCTCCCAATTCAAGGCCTGCCCTTGTCAAAGGTAAAATGTTAGCACGTTTCCACTaGGAGAGATTTCCTACATTA +
Preference number: 5 (lower is better)
Translates to: GQVAAAPNSRPALVKGKMLARFH*ERFPTL
Trigger: TAATGTAGGAAATCTCTCCAAGTGGAAACGTGCTAA...CATTTTACCTTTGACAAGGGCAGGCCTTGAATTGGGAGCAGCAGCCACCTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp GAGGGAGCACCTATGCGCTGGCTGACTTCTAATGCATCTATCAGTTATGGGCTACTGTTCCTTCTCGCCTaGTTTTCTGGTTTTTGTCCA +
Preference number: 5 (lower is better)
Translates to: EGAPMRWLTSNASISYGLLFLLA*FSGFCP
Trigger: TGGACAAAAACCAGAAAACAAGGCGAGAAGGAACAG...TAGCCCATAACTGATAGATGCATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp AATAAGGTAGTCCTGGAAGATGGGCACTGCACACGCCGGGGTTTAGATGTCAAGACCAAATCACCAACGTaGTATTTCAACAGGTGGTCT +
Preference number: 5 (lower is better)
Translates to: NKVVLEDGHCTRRGLDVKTKSPT*YFNRWS
Trigger: AGACCACCTGTTGAAATACAACGTTGGTGATTTGGT...CTTGACATCTAAACCCCGGCGTGTGCAGTGCCCATCTTCCAGGACTACCTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GTAGTTCCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTCCCAGCTCTTCTCTCACAGACTaGGGGTTTTCAGCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: VVPKFHPNDILEVQLLPSSSLTD*GFSAAS
Trigger: AGAAGCTGCTGAAAACCCCAAGTCTGTGAGAGAAGA...GCTGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGGAACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp CGACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATATACTCTTCTCTCACAGACTaGGGGTTTTCAGCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: RPRYTGLMHYSKSKPSIYSSLTD*GFSAAS
Trigger: AGAAGCTGCTGAAAACCCCAAGTCTGTGAGAGAAGA...GTATATCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CAA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATGCAGAGCTACACAGTTaGGCCCTCCGCCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNAELHS*ALRLLF
Trigger: GAAGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTGC...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATATACATGGCCTTGTAAGAGCTaGTTCTGGCCGTTTTGTCAG +
Preference number: 5 (lower is better)
Translates to: DPATLASCITLNQSLRYTWPCKS*FWPFCQ
Trigger: CTGACAAAACGGCCAGAACAAGCTCTTACAAGGCCA...TGTATATCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CAA 90 bp AGAGTGGGAGGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGGAAGGAGATGAACTTTaGCTAAACCCAAGAGCTGAA +
Preference number: 5 (lower is better)
Translates to: RVGGNLDIRRNSSVAVTLEGDEL*LNPRAE
Trigger: TTCAGCTCTTGGGTTTAGCAAAAGTTCATCTCCTTC...CAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTCCCAGCCCTGCAGACAGATACTTCAGTTaGTGTTTCGTCTGCACTTTC +
Preference number: 5 (lower is better)
Translates to: PKFHPNDILEVQLLPSPADRYFS*CFVCTF
Trigger: GAAAGTGCAGACGAAACACAAACTGAAGTATCTGTC...TGCAGGGCTGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp AGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCCCTCGCTCAGACTTTTaGGATGAGACAGATACTTCA +
Preference number: 5 (lower is better)
Translates to: RYFSLCFVCTFVWGLRGLPRSDF*DETDTS
Trigger: TGAAGTATCTGTCTCATCCAAAAAGTCTGAGCGAGG...GAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR CAA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCAGTGCAGATGATGCTGTaGGAGGCGATCACTGAGCAT +
Preference number: 5 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSVQMML*EAITEH
Trigger: ATGCTCAGTGATCGCCTCCAACAGCATCATCTGCAC...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp TGGCACACATACTCCTTTTTGGCAGTCACTCCTCGCTCAGACTTTTTGGATGAGTTTGGGGGAACATTTTaGGGATGGCAAACTTCTGCC +
Preference number: 5 (lower is better)
Translates to: WHTYSFLAVTPRSDFLDEFGGTF*GWQTSA
Trigger: GGCAGAAGTTTGCCATCCCAAAAATGTTCCCCCAAA...CTCATCCAAAAAGTCTGAGCGAGGAGTGACTGCCAAAAAGGAGTATGTGTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CAA 90 bp CAGGGCCGCATCAGTAAACACACACTTCAGTCGGTGGTGATTTGTGAAATAGGTACGAGCTTCAGCTTCTaGCAGTGCGTTTTTGAAGAC +
Preference number: 5 (lower is better)
Translates to: QGRISKHTLQSVVICEIGTSFSF*QCVFED
Trigger: GTCTTCAAAAACGCACTGCAAGAAGCTGAAGCTCGT...ACCTATTTCACAAATCACCACCGACTGAAGTGTGTGTTTACTGATGCGGCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp TCTTTAGACCCAAAGAAAAACACAGGGAATTCTCCAATCTCGTGCTTCATTTTCTTTCTGATGTCCCTCTaGGCGACCAGGCCCCACCCT +
Preference number: 5 (lower is better)
Translates to: SLDPKKNTGNSPISCFIFFLMSL*ATRPHP
Trigger: AGGGTGGGGCCTGGTCGCCAAGAGGGACATCAGAAA...GAAAATGAAGCACGAGATTGGAGAATTCCCTGTGTTTTTCTTTGGGTCTAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp CCCCACGCTTACAGGTCACAAAACCACGGAGTAGCCACTCTCAGGTCCAAAGACAAAGTGGACGTGTTATaGGCATTTCATTCAAATCCA +
Preference number: 5 (lower is better)
Translates to: PHAYRSQNHGVATLRSKDKVDVL*AFHSNP
Trigger: TGGATTTGAATGAAATGCCAATAACACGTCCACTTT...GTCTTTGGACCTGAGAGTGGCTACTCCGTGGTTTTGTGACCTGTAAGCGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGCGCGTAAACTACACGTaGAAAGTGGACGTGTTATTG +
Preference number: 5 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLRVNYT*KVDVLL
Trigger: CAATAACACGTCCACTTTCAACGTGTAGTTTACGCG...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp ACCTCAACAGGGTATGGTGAGGCTGTGACACCCCGTGGACACAGCATTTTACTCATTAATGATGGAGGATaGAAGCTGATGTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: TSTGYGEAVTPRGHSILLINDGG*KLMFRK
Trigger: CTTCCTGAACATCAGCTTCAATCCTCCATCATTAAT...GAGTAAAATGCTGTGTCCACGGGGTGTCACAGCCTCACCATACCCTGTTGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp GTAGTTCCCAAGTTTCACCCAAATGATATCCTGGAAGTGCAGCTTCTTCCCAGCAGGAATCCTGAGGGATaGGGGCGGTTTTTGTGTTTT +
Preference number: 5 (lower is better)
Translates to: VVPKFHPNDILEVQLLPSRNPEG*GRFLCF
Trigger: AAAACACAAAAACCGCCCCAATCCCTCAGGATTCCT...GCTGGGAAGAAGCTGCACTTCCAGGATATCATTTGGGTGAAACTTGGGAACTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp AAACCAGGAGATGGTCCTCTCGGAAAACTCCGCTCCTCTAGGATGAGCCCACTCTTCCTGCCTCTTATGTaGGAAATTAGTGTAGTATCT +
Preference number: 5 (lower is better)
Translates to: KPGDGPLGKLRSSRMSPLFLPLM*EISVVS
Trigger: AGATACTACACTAATTTCCAACATAAGAGGCAGGAA...GAGTGGGCTCATCCTAGAGGAGCGGAGTTTTCCGAGAGGACCATCTCCTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp TATTACATCATTCTAAGTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACACAGGAGCAGCAAGCTaGCTCCTGACAGCATGGCTC +
Preference number: 5 (lower is better)
Translates to: YYIILSAVQSSWVQIQLDTGAAS*LLTAWL
Trigger: GAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGT...GTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCACTTAGAATGATGTAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS TCA 90 bp GGGGTGGAGAGAGAGGTGCAAAGAACAAGAATTAAATTGCAGTTCTaGGCCACTAAAATCAAGCAACTCCTCTTCAGAGGCAGCCATGCT +
Preference number: 5 (lower is better)
Translates to: GVEREVQRTRIKLQF*ATKIKQLLFRGSHA
Trigger: AGCATGGCTGCCTCTGAAGAGGAGTTGCTTGATTTTAGTGGCTCAGAACTGCAATTTAATTCTTGTTCTTTGCACCTCTCTCTCCACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382888.3
CDS-3UTR CAA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATCTGGAGAGCTGGGCTTaGCTGAGGAACACAGAACAC +
Preference number: 5 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNLESWA*LRNTEH
Trigger: GTGTTCTGTGTTCCTCAGCAAAGCCCAGCTCTCCAG...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp TCCACTGAGTTATCAACGGGTATTGTAGAGACATTCAAAGTTAGTGTTACTTGCGACTCAAAACGCAGTTaGGCATCGTGTGCGCCGGGT +
Preference number: 5 (lower is better)
Translates to: STELSTGIVETFKVSVTCDSKRS*ASCAPG
Trigger: ACCCGGCGCACACGATGCCAAACTGCGTTTTGAGTC...GCAAGTAACACTAACTTTGAATGTCTCTACAATACCCGTTGATAACTCAGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp TATAAGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGGACTCAAAACGCAGTTaGGCATCGTGTGCGCCGGGT +
Preference number: 5 (lower is better)
Translates to: YKEHDAHYGIYASPSKCRDSKRS*ASCAPG
Trigger: ACCCGGCGCACACGATGCCAAACTGCGTTTTGAGTC...CCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CAA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACATTCAACAGGTGGTCTTaGTCTCTTCCAGTGTTTGGA +
Preference number: 5 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTFNRWS*SLPVFG
Trigger: TCCAAACACTGGAAGAGACAAAGACCACCTGTTGAA...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CGCTCAGACTTTTTGGATGAGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTAGCCTCCTTGGCTACTaGAGGGTTGAGATGAAGCTG +
Preference number: 5 (lower is better)
Translates to: RSDFLDETDTSVCVSSALSLLGY*RVEMKL
Trigger: CAGCTTCATCTCAACCCTCAAGTAGCCAAGGAGGCT...AAGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312087.10
ENST00000353275.9
CDS-3UTR CAA 90 bp AACAGCAATTCTCATGGTCACCTAACTCATATCAGAATCGGGCCCAGCAGTCAACTTGTTCTGGCCGTTTaGTCAGTGATTGTGTCTCTC +
Preference number: 5 (lower is better)
Translates to: NSNSHGHLTHIRIGPSSQLVLAV*SVIVSL
Trigger: GAGAGACACAATCACTGACAAAACGGCCAGAACAAG...TTGACTGCTGGGCCCGATTCTGATATGAGTTAGGTGACCATGAGAATTGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420906.6
CDS-3UTR CAA 90 bp AATTTTTGCATGAACACTGAGGAAAGGCCCAAAGATCCATCTAGAGCAGGTGGGCTTGTTCTGGCCGTTTaGTCAGTGATTGTGTCTCTC +
Preference number: 5 (lower is better)
Translates to: NFCMNTEERPKDPSRAGGLVLAV*SVIVSL
Trigger: GAGAGACACAATCACTGACAAAACGGCCAGAACAAG...CCCACCTGCTCTAGATGGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp GACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACACATTTCAGAGGAGAGAAGGAGATGAACTTTaGCTAAACCCAAGAGCTGAA +
Preference number: 5 (lower is better)
Translates to: DEFLATLGKSLRYTFQRREGDEL*LNPRAE
Trigger: TTCAGCTCTTGGGTTTAGCAAAAGTTCATCTCCTTC...TCTCCTCTGAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp AGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGTATGGGGACTCCGAGGGCTCGAAGGAGATGAACTTTaGCTAAACCCAAGAGCTGAA +
Preference number: 5 (lower is better)
Translates to: RYFSLCFVCTFVWGLRGLEGDEL*LNPRAE
Trigger: TTCAGCTCTTGGGTTTAGCAAAAGTTCATCTCCTTC...GAGCCCTCGGAGTCCCCATACGAAAGTGCAGACGAAACACAAACTGAAGTATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR CAA 90 bp TTAATTTCTGACGGGGCATTTCACACCTCAACAGGGTATGGTGAGGCTGTGACAGGGCTGTCCGAGACCTaGGTCTTAAAATTTGTTATC +
Preference number: 5 (lower is better)
Translates to: LISDGAFHTSTGYGEAVTGLSET*VLKFVI
Trigger: GATAACAAATTTTAAGACCAAGGTCTCGGACAGCCC...TGTCACAGCCTCACCATACCCTGTTGAGGTGTGAAATGCCCCGTCAGAAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312087.10
CDS-3UTR CAA 90 bp GACGAGTTTCTAGCGACCCTTGGGAAAAGCCTACGCTACACATTTCAGAGGAGACGCTTAACATCTGTCTaGCTCTCTTTACACACGAAA +
Preference number: 5 (lower is better)
Translates to: DEFLATLGKSLRYTFQRRRLTSV*LSLHTK
Trigger: TTTCGTGTGTAAAGAGAGCAAGACAGATGTTAAGCG...TCTCCTCTGAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAACTCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp TCCACTGAGTTATCAACGGGTATTGTAGAGACATTCAAAGTTAGTGTTACTTGCGGGTCGTCGAGGTCTTaGGTCTATCCCCGAGGAATC +
Preference number: 5 (lower is better)
Translates to: STELSTGIVETFKVSVTCGSSRS*VYPRGI
Trigger: GATTCCTCGGGGATAGACCAAAGACCTCGACGACCC...GCAAGTAACACTAACTTTGAATGTCTCTACAATACCCGTTGATAACTCAGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp GGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGAGGAGTGAGATTAATGATGGAGGATaGAAGCTGATGTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: GNLDIRRNSSVAVTLRSEINDGG*KLMFRK
Trigger: CTTCCTGAACATCAGCTTCAATCCTCCATCATTAAT...CTCACTCCTCAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp AGAGTGGGAGGGAACCTTGACATTCGGAGAAATTCAAGTGTGGCGGTAACGCTGATTAATGATGGAGGATaGAAGCTGATGTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: RVGGNLDIRRNSSVAVTLINDGG*KLMFRK
Trigger: CTTCCTGAACATCAGCTTCAATCCTCCATCATTAAT...CAGCGTTACCGCCACACTTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp TCTGCCTTTCACGACATGAAAGGTTGTGTCATGAAACCTCGCTTAAGTTTCCTACCTATCAACCCAACTTaGTCCCACTGTGTCCTGAGC +
Preference number: 5 (lower is better)
Translates to: SAFHDMKGCVMKPRLSFLPINPT*SHCVLS
Trigger: GCTCAGGACACAGTGGGACAAAGTTGGGTTGATAGG...TAGGAAACTTAAGCGAGGTTTCATGACACAACCTTTCATGTCGTGAAAGGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS TCA 90 bp AGGATTTCTGGTGCCTGCTTCATCTTTATGCACTTTACAACACTCTaGACAGAAAGGGGACTCTGCTTGATGCTAAATTCCATCCAGCCC +
Preference number: 5 (lower is better)
Translates to: RISGACFIFMHFTTL*TERGLCLMLNSIQP
Trigger: GGGCTGGATGGAATTTAGCATCAAGCAGAGTCCCCTTTCTGTTCAGAGTGTTGTAAAGTGCATAAAGATGAAGCAGGCACCAGAAATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000398261.6
ENST00000420906.6
ENST00000503128.5
ENST00000507820.5
ENST00000508355.5
ENST00000508803.6
ENST00000509115.5
ENST00000512700.2
ENST00000514045.5
ENST00000515806.1
ENST00000677559.1
CDS-3UTR CAA 90 bp CATATAAGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTACTCGGAGTCTTCCCGTaGGCACTGCCGAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: HIRNMMHTMGSMHHLQNVLGVFP*ALPRIS
Trigger: AGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGAG...TACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCTTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CAA 90 bp AACAGCAATTCTCATGGTCACCTAACTCATATCAGAATCGGGCCCAGCAGTCAACTGTTCCTTCTCGCCTaGTTTTCTGGTTTTTGTCCA +
Preference number: 5 (lower is better)
Translates to: NSNSHGHLTHIRIGPSSQLFLLA*FSGFCP
Trigger: TGGACAAAAACCAGAAAACAAGGCGAGAAGGAACAG...TTGACTGCTGGGCCCGATTCTGATATGAGTTAGGTGACCATGAGAATTGCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420906.6
CDS-3UTR CAA 90 bp AATTTTTGCATGAACACTGAGGAAAGGCCCAAAGATCCATCTAGAGCAGGTGGGTTCAACAGGTGGTCTTaGTCTCTTCCAGTGTTTGGA +
Preference number: 5 (lower is better)
Translates to: NFCMNTEERPKDPSRAGGFNRWS*SLPVFG
Trigger: TCCAAACACTGGAAGAGACAAAGACCACCTGTTGAA...CCCACCTGCTCTAGATGGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCGCAGAGCTACACAGTTaGGCCCTCCGCCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: TGNSNVLRLECITIILRFAELHS*ALRLLF
Trigger: GAAGAGAAGGCGGAGGGCCAAACTGTGTAGCTCTGC...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp TGTGACACCCCGTGGACACAGCATTTTACTCTACTGACTAACAAACAGTCATCACTTGTTCTGGCCGTTTaGTCAGTGATTGTGTCTCTC +
Preference number: 5 (lower is better)
Translates to: CDTPWTQHFTLLTNKQSSLVLAV*SVIVSL
Trigger: GAGAGACACAATCACTGACAAAACGGCCAGAACAAG...TGATGACTGTTTGTTAGTCAGTAGAGTAAAATGCTGTGTCCACGGGGTGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CGACCCCGCTACACTGGCCTCATGCATTACTCTAAATCAAAGCCTTCGATATACGAAGGAGATGAACTTTaGCTAAACCCAAGAGCTGAA +
Preference number: 5 (lower is better)
Translates to: RPRYTGLMHYSKSKPSIYEGDEL*LNPRAE
Trigger: TTCAGCTCTTGGGTTTAGCAAAAGTTCATCTCCTTC...GTATATCGAAGGCTTTGATTTAGAGTAATGCATGAGGCCAGTGTAGCGGGGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CAA 90 bp CTCCTCATAAACATGACAAAAACAGGACCCATGTCTACAATGAGAAAAACAGCAGGGTTCAAATCCAACTaGACTGGTGTGGGCTCCCAC +
Preference number: 5 (lower is better)
Translates to: LLINMTKTGPMSTMRKTAGFKSN*TGVGSH
Trigger: GTGGGAGCCCACACCAGTCAAGTTGGATTTGAACCC...TGCTGTTTTTCTCATTGTAGACATGGGTCCTGTTTTTGTCATGTTTATGAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000420906.6
CDS-3UTR CAA 90 bp CAGGGCCGCATCAGTAAACACACACTTCAGTCGGTGGTGATTTGTGAAATAGGTGACAGATACTTCAGTTaGTGTTTCGTCTGCACTTTC +
Preference number: 5 (lower is better)
Translates to: QGRISKHTLQSVVICEIGDRYFS*CFVCTF
Trigger: GAAAGTGCAGACGAAACACAAACTGAAGTATCTGTC...ACCTATTTCACAAATCACCACCGACTGAAGTGTGTGTTTACTGATGCGGCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATCTTGGGTTTGAAGGGTaGGAAGCATGGCAGCTCACA +
Preference number: 5 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNLGFEG*EAWQLT
Trigger: TGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAAG...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCACAGGAGCAGCAAGCTaGCTCCTGACAGCATGGCTC +
Preference number: 5 (lower is better)
Translates to: TGNSNVLRLECITIILRFTGAAS*LLTAWL
Trigger: GAGCCATGCTGTCAGGAGCAAGCTTGCTGCTCCTGT...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp GGCAAAAGGGCTCTCACCTGGTCTGTATACAAAAGTCTACCTGGCCAGAGGAAGTACCTCAGTCATTTCTaGAAAATACTATATGCCTGG +
Preference number: 5 (lower is better)
Translates to: GKRALTWSVYKSLPGQRKYLSHF*KILYAW
Trigger: CCAGGCATATAGTATTTTCAAGAAATGACTGAGGTA...CTTCCTCTGGCCAGGTAGACTTTTGTATACAGACCAGGTGAGAGCCCTTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp TATTACATCATTCTAAGTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACCCTATCAACCCAACTTaGTCCCACTGTGTCCTGAGC +
Preference number: 5 (lower is better)
Translates to: YYIILSAVQSSWVQIQLDPINPT*SHCVLS
Trigger: GCTCAGGACACAGTGGGACAAAGTTGGGTTGATAGG...GTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCACTTAGAATGATGTAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR CAA 90 bp TCTGCCTTTCACGACATGAAAGGTTGTGTCATGAAACCTCGCTTAAGTTTCCTAAACCTGCACAGGCTTTaGTGTAGCCGTAGCCACATA +
Preference number: 5 (lower is better)
Translates to: SAFHDMKGCVMKPRLSFLNLHRL*CSRSHI
Trigger: TATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTT...TAGGAAACTTAAGCGAGGTTTCATGACACAACCTTTCATGTCGTGAAAGGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp TATTACATCATTCTAAGTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACTCAAGAACTTTCCCGTaGTTTCCCGCGTCCACCACA +
Preference number: 5 (lower is better)
Translates to: YYIILSAVQSSWVQIQLDSRTFP*FPASTT
Trigger: TGTGGTGGACGCGGGAAACAACGGGAAAGTTCTTGA...GTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCACTTAGAATGATGTAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR CAA 90 bp ACAAATGTGGACCTAACACGTAACCATGGAGTTCAAAGGTATCCAACCAAAAAGACTCGGAGAAGCCATTaGTGGAGGTGGCACATTCAC +
Preference number: 5 (lower is better)
Translates to: TNVDLTRNHGVQRYPTKKTRRSH*WRWHIH
Trigger: GTGAATGTGCCACCTCCACAAATGGCTTCTCCGAGT...CTTTTTGGTTGGATACCTTTGAACTCCATGGTTACGTGTTAGGTCCACATTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp TATTACATCATTCTAAGTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACACTCGGAGAAGCCATTaGTGGAGGTGGCACATTCAC +
Preference number: 5 (lower is better)
Translates to: YYIILSAVQSSWVQIQLDTRRSH*WRWHIH
Trigger: GTGAATGTGCCACCTCCACAAATGGCTTCTCCGAGT...GTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCACTTAGAATGATGTAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR CAA 90 bp GGCCCCCAGTTATCATCTCCTCATAAACATGACAAAAACAGGACCCATGTCTACACGTTCTGTGGCTATTaGTTGTTTTTGGCAACGGCA +
Preference number: 5 (lower is better)
Translates to: GPQLSSPHKHDKNRTHVYTFCGY*LFLATA
Trigger: TGCCGTTGCCAAAAACAACAAATAGCCACAGAACGT...GTAGACATGGGTCCTGTTTTTGTCATGTTTATGAGGAGATGATAACTGGGGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS TCA 90 bp CAGCGCTTAACATCTGTCTTGCTCTCTTTACACACGAAACATGAGTaGATCCCTAACAAAAAGTTAAAGAAGGGGTGGAGAGAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: QRLTSVLLSLHTKHE*IPNKKLKKGWRERC
Trigger: GCACCTCTCTCTCCACCCCTTCTTTAACTTTTTGTTAGGGATTCACTCATGTTTCGTGTGTAAAGAGAGCAAGACAGATGTTAAGCGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382888.3
CDS TCA 90 bp TGGCTCTATCCATACCTGGTTCCACGTCCCCCTGCCAGATTATTCTaGAGCAAATCCCAGACATATCATTTCATCCATAAGAAGTTTAGC +
Preference number: 5 (lower is better)
Translates to: WLYPYLVPRPPARLF*SKSQTYHFIHKKFS
Trigger: GCTAAACTTCTTATGGATGAAATGATATGTCTGGGATTTGCTTCAGAATAATCTGGCAGGGGGACGTGGAACCAGGTATGGATAGAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482415.6
CDS GCA 90 bp GCTAAATTCCATCCAGCCCAGATGCTTCCGTTCTTAGAACACTCGTaGCACCACAAGTGTCCAGAATTTTATGCCCAGGTAAATTATCAT +
Preference number: 5 (lower is better)
Translates to: AKFHPAQMLPFLEHS*HHKCPEFYAQVNYH
Trigger: ATGATAATTTACCTGGGCATAAAATTCTGGACACTTGTGGTGGCACGAGTGTTCTAAGAACGGAAGCATCTGGGCTGGATGGAATTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507820.5
CDS-3UTR CAA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGACTGGAGAGCTGGGCTTaGCTGAGGAACACAGAACAC +
Preference number: 5 (lower is better)
Translates to: FLKILYAWMVSMLQNITRLESWA*LRNTEH
Trigger: GTGTTCTGTGTTCCTCAGCAAAGCCCAGCTCTCCAG...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATTCTTCTCTCACAGACTaGGGGTTTTCAGCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHSSLTD*GFSAAS
Trigger: AGAAGCTGCTGAAAACCCCAAGTCTGTGAGAGAAGA...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CAGACTTTTTGGATGAGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGTTTCCGAAGACTGTGCTaGTCCGTCCTGAGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: QTFWMRQILQFVFRLHFRFRRLC*SVLSLF
Trigger: GAAAAGACTCAGGACGGACAAGCACAGTCTTCGGAA...ACGAAAGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAAAAAGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR CAA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATTGGCCTTGTAAGAGCTaGTTCTGGCCGTTTTGTCAG +
Preference number: 5 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNWPCKS*FWPFCQ
Trigger: CTGACAAAACGGCCAGAACAAGCTCTTACAAGGCCA...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp AAACAGTCATCAACTACACTCATAGGATCAAGATATTTGGCAACTGACAGTCATTTGACGGCCTTGGGTTaGAAGGGTTGGAAGCATGGC +
Preference number: 5 (lower is better)
Translates to: KQSSTTLIGSRYLATDSHLTALG*KGWKHG
Trigger: GCCATGCTTCCAACCCTTCAAACCCAAGGCCGTCAA...ATGACTGTCAGTTGCCAAATATCTTGATCCTATGAGTGTAGTTGATGACTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATTCTTGCAGTGCGTTTTaGAAGACTCTTCCGATCCCT +
Preference number: 5 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHSCSAF*KTLPIP
Trigger: AGGGATCGGAAGAGTCTTCAAAAACGCACTGCAAGA...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATACGAGCTTCAGCTTCTaGCAGTGCGTTTTTGAAGAC +
Preference number: 5 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHTSFSF*QCVFED
Trigger: GTCTTCAAAAACGCACTGCAAGAAGCTGAAGCTCGT...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATTCTGTGGGCTTGCAGTaGCACTTAGGGATTTCTGAA +
Preference number: 5 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHSVGLQ*HLGISE
Trigger: TTCAGAAATCCCTAAGTGCAACTGCAAGCCCACAGA...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATGAGTGGGAGGGAACCTaGACATTCGGAGAAATTCAA +
Preference number: 5 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHEWEGT*TFGEIQ
Trigger: TTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTC...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp CAGGCCTCGAAAGTGCTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGATAGGATCAAGATATTaGGCAACTGACAGTCATTTG +
Preference number: 5 (lower is better)
Translates to: QASKVLRVNYTLKVDVLLIGSRY*ATDSHL
Trigger: CAAATGACTGTCAGTTGCCAAATATCTTGATCCTAT...CAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCACTTTCGAGGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTACGTGTGCTGTTAGTTaGTTTCTGAGGGTAGCGACG +
Preference number: 5 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTTCAVS*FLRVAT
Trigger: CGTCGCTACCCTCAGAAACAAACTAACAGCACACGT...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCAGATTACAGTATCCCCTaGGTCCGGGGCCTTGGATCA +
Preference number: 5 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSDYSIP*VRGLGS
Trigger: TGATCCAAGGCCCCGGACCAAGGGGATACTGTAATC...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp TTCAGTGGTTTACATGCATCAGACAGATTTTTCGTTGCTGCCTGGCTCTTGAGCATGTCATGCTGCTCTTaGGACACCATTTGGTCATTT +
Preference number: 5 (lower is better)
Translates to: FSGLHASDRFFVAAWLLSMSCCS*DTIWSF
Trigger: AAATGACCAAATGGTGTCCAAAGAGCAGCATGACAT...GCTCAAGAGCCAGGCAGCAACGAAAAATCTGTCTGATGCATGTAAACCACTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR CAA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGATGCAGTGAGCCGAGATaGTGCCACTTACTGCACTCC +
Preference number: 5 (lower is better)
Translates to: FLKILYAWMVSMLQNITRCSEPR*CHLLHS
Trigger: GGAGTGCAGTAAGTGGCACAATCTCGGCTCACTGCA...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp GGACTTTTCAAGATGATATTACCAAACATAACGGAACCTAGTGAACACATTCCATGCAGTGAGCCGAGATaGTGCCACTTACTGCACTCC +
Preference number: 5 (lower is better)
Translates to: GLFKMILPNITEPSEHIPCSEPR*CHLLHS
Trigger: GGAGTGCAGTAAGTGGCACAATCTCGGCTCACTGCA...TGGAATGTGTTCACTAGGTTCCGTTATGTTTGGTAATATCATCTTGAAAAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCTGCAGTGAGCCGAGATaGTGCCACTTACTGCACTCC +
Preference number: 5 (lower is better)
Translates to: TGNSNVLRLECITIILRFCSEPR*CHLLHS
Trigger: GGAGTGCAGTAAGTGGCACAATCTCGGCTCACTGCA...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp GACCTCTATTGCCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGAAAGGAAGCATGCTCCTaGCTCATCCAGTATAGGAAT +
Preference number: 5 (lower is better)
Translates to: DLYCQYVHYLKMPPYYNGKEACS*LIQYRN
Trigger: ATTCCTATACTGGATGAGCAAGGAGCATGCTTCCTT...TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp GACCTCTATTGCCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGAGGGAATGCAGTCTCCTaGATCTATTACAGGGACTTT +
Preference number: 5 (lower is better)
Translates to: DLYCQYVHYLKMPPYYNGGNAVS*IYYRDF
Trigger: AAAGTCCCTGTAATAGATCAAGGAGACTGCATTCCC...TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp AACAGCAATTCTCATGGTCACCTAACTCATATCAGAATCGGGCCCAGCAGTCAAAGAACAAAGAAATCTTaGGCTTCCTCCATGAGCCTA +
Preference number: 5 (lower is better)
Translates to: NSNSHGHLTHIRIGPSSQRTKKS*ASSMSL
Trigger: TAGGCTCATGGAGGAAGCCAAAGATTTCTTTGTTCT...TTGACTGCTGGGCCCGATTCTGATATGAGTTAGGTGACCATGAGAATTGCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420906.6
CDS CCA 90 bp GACACTTTGGACCACACCAAATCACCAACGTTGTATTTCAACAGGTaGTCTTTGTCTCTTCCAGTGTTTGGACAAGACTCTTTCTTAGCT +
Preference number: 5 (lower is better)
Translates to: DTLDHTKSPTLYFNR*SLSLPVFGQDSFLA
Trigger: AGCTAAGAAAGAGTCTTGTCCAAACACTGGAAGAGACAAAGACCACCTGTTGAAATACAACGTTGGTGATTTGGTGTGGTCCAAAGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000398261.6
ENST00000420906.6
ENST00000503128.5
ENST00000508355.5
ENST00000508803.6
ENST00000509115.5
ENST00000512700.2
ENST00000514045.5
ENST00000677559.1
ENST00000678714.1
CDS-3UTR CAA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATCTGTTCCTTCTCGCCTaGTTTTCTGGTTTTTGTCCA +
Preference number: 5 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHLFLLA*FSGFCP
Trigger: TGGACAAAAACCAGAAAACAAGGCGAGAAGGAACAG...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp TTTTGCTTTCTCCATAATATAGAGGGAGCACCTATGCGCTGGCTGACTTCTAATCTGTTCCTTCTCGCCTaGTTTTCTGGTTTTTGTCCA +
Preference number: 5 (lower is better)
Translates to: FCFLHNIEGAPMRWLTSNLFLLA*FSGFCP
Trigger: TGGACAAAAACCAGAAAACAAGGCGAGAAGGAACAG...ATTAGAAGTCAGCCAGCGCATAGGTGCTCCCTCTATATTATGGAGAAAGCAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp AGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGAAGGTTCAACAGGTGGTCTTaGTCTCTTCCAGTGTTTGGA +
Preference number: 5 (lower is better)
Translates to: RNMMHTMGSMHHLQNVGRFNRWS*SLPVFG
Trigger: TCCAAACACTGGAAGAGACAAAGACCACCTGTTGAA...CCTTCCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CAA 90 bp AAACAGTCATCAACTACACTCATAGGATCAAGATATTTGGCAACTGACAGTCATAGCCTCCTTGGCTACTaGAGGGTTGAGATGAAGCTG +
Preference number: 5 (lower is better)
Translates to: KQSSTTLIGSRYLATDSHSLLGY*RVEMKL
Trigger: CAGCTTCATCTCAACCCTCAAGTAGCCAAGGAGGCT...ATGACTGTCAGTTGCCAAATATCTTGATCCTATGAGTGTAGTTGATGACTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGAAGCCTCCTTGGCTACTaGAGGGTTGAGATGAAGCTG +
Preference number: 5 (lower is better)
Translates to: FLKILYAWMVSMLQNITRSLLGY*RVEMKL
Trigger: CAGCTTCATCTCAACCCTCAAGTAGCCAAGGAGGCT...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATTCTTCTCTCACAGACTaGGGGTTTTCAGCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNSSLTD*GFSAAS
Trigger: AGAAGCTGCTGAAAACCCCAAGTCTGTGAGAGAAGA...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp TCCACTGAGTTATCAACGGGTATTGTAGAGACATTCAAAGTTAGTGTTACTTGCCCTTTGCCATCTGTCTaGATGATCTTGGTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: STELSTGIVETFKVSVTCPLPSV*MILVSG
Trigger: CCCAGAGACCAAGATCATCAAGACAGATGGCAAAGG...GCAAGTAACACTAACTTTGAATGTCTCTACAATACCCGTTGATAACTCAGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAACGTGTGCTGTTAGTTaGTTTCTGAGGGTAGCGACG +
Preference number: 5 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGTCAVS*FLRVAT
Trigger: CGTCGCTACCCTCAGAAACAAACTAACAGCACACGT...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp TCTGCCTTTCACGACATGAAAGGTTGTGTCATGAAACCTCGCTTAAGTTTCCTATGTATCCTGCAACATTaGAGCAGAGCCAATAGAGGA +
Preference number: 5 (lower is better)
Translates to: SAFHDMKGCVMKPRLSFLCILQH*SRANRG
Trigger: TCCTCTATTGGCTCTGCTCAAATGTTGCAGGATACA...TAGGAAACTTAAGCGAGGTTTCATGACACAACCTTTCATGTCGTGAAAGGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAACCTGCACAGGCTTTaGTGTAGCCGTAGCCACATA +
Preference number: 5 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGNLHRL*CSRSHI
Trigger: TATGTGGCTACGGCTACACAAAAGCCTGTGCAGGTT...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp ACAAATGTGGACCTAACACGTAACCATGGAGTTCAAAGGTATCCAACCAAAAAGCTGTTCCTTCTCGCCTaGTTTTCTGGTTTTTGTCCA +
Preference number: 5 (lower is better)
Translates to: TNVDLTRNHGVQRYPTKKLFLLA*FSGFCP
Trigger: TGGACAAAAACCAGAAAACAAGGCGAGAAGGAACAG...CTTTTTGGTTGGATACCTTTGAACTCCATGGTTACGTGTTAGGTCCACATTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp TGTGCACTACCTGAAGATGCCACCCTATTACAATGGAGTACTTACGTTTTTAGATTCAACAGGTGGTCTTaGTCTCTTCCAGTGTTTGGA +
Preference number: 5 (lower is better)
Translates to: CALPEDATLLQWSTYVFRFNRWS*SLPVFG
Trigger: TCCAAACACTGGAAGAGACAAAGACCACCTGTTGAA...TCTAAAAACGTAAGTACTCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp TCCACTGAGTTATCAACGGGTATTGTAGAGACATTCAAAGTTAGTGTTACTTGCTCTTCTCTCACAGACTaGGGGTTTTCAGCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: STELSTGIVETFKVSVTCSSLTD*GFSAAS
Trigger: AGAAGCTGCTGAAAACCCCAAGTCTGTGAGAGAAGA...GCAAGTAACACTAACTTTGAATGTCTCTACAATACCCGTTGATAACTCAGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAATGGCCTTGTAAGAGCTaGTTCTGGCCGTTTTGTCAG +
Preference number: 5 (lower is better)
Translates to: STTSTIYSISNEMHLERKWPCKS*FWPFCQ
Trigger: CTGACAAAACGGCCAGAACAAGCTCTTACAAGGCCA...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATGACAGATACTTCAGTTaGTGTTTCGTCTGCACTTTC +
Preference number: 5 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHDRYFS*CFVCTF
Trigger: GAAAGTGCAGACGAAACACAAACTGAAGTATCTGTC...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp TCAGACTTTTTGGATGAGACAGATACTTCAGTTTGTGTTTCGTCTGCACTTTCGCCTCGCTCAGACTTTTaGGATGAGACAGATACTTCA +
Preference number: 5 (lower is better)
Translates to: SDFLDETDTSVCVSSALSPRSDF*DETDTS
Trigger: TGAAGTATCTGTCTCATCCAAAAAGTCTGAGCGAGG...CGAAAGTGCAGACGAAACACAAACTGAAGTATCTGTCTCATCCAAAAAGTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000511904.1
CDS-3UTR CAA 90 bp CTCCGCGTAAACTACACGTTGAAAGTGGACGTGTTATTGGCATTTCATTCAAATCCTCGCTCAGACTTTTaGGATGAGACAGATACTTCA +
Preference number: 5 (lower is better)
Translates to: LRVNYTLKVDVLLAFHSNPRSDF*DETDTS
Trigger: TGAAGTATCTGTCTCATCCAAAAAGTCTGAGCGAGG...ATTTGAATGAAATGCCAATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATCGCTTAACATCTGTCTaGCTCTCTTTACACACGAAA +
Preference number: 5 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHRLTSV*LSLHTK
Trigger: TTTCGTGTGTAAAGAGAGCAAGACAGATGTTAAGCG...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp AAACAGTCATCAACTACACTCATAGGATCAAGATATTTGGCAACTGACAGTCATCCTTTGCCATCTGTCTaGATGATCTTGGTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: KQSSTTLIGSRYLATDSHPLPSV*MILVSG
Trigger: CCCAGAGACCAAGATCATCAAGACAGATGGCAAAGG...ATGACTGTCAGTTGCCAAATATCTTGATCCTATGAGTGTAGTTGATGACTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp TCTTTAGACCCAAAGAAAAACACAGGGAATTCTCCAATCTCGTGCTTCATTTTCGAGTGGGAGGGAACCTaGACATTCGGAGAAATTCAA +
Preference number: 5 (lower is better)
Translates to: SLDPKKNTGNSPISCFIFEWEGT*TFGEIQ
Trigger: TTGAATTTCTCCGAATGTCAAGGTTCCCTCCCACTC...GAAAATGAAGCACGAGATTGGAGAATTCCCTGTGTTTTTCTTTGGGTCTAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000677559.1
CDS-3UTR CAA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTTGTATCCTGCAACATTaGAGCAGAGCCAATAGAGGA +
Preference number: 5 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTCILQH*SRANRG
Trigger: TCCTCTATTGGCTCTGCTCAAATGTTGCAGGATACA...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp ACAAATGTGGACCTAACACGTAACCATGGAGTTCAAAGGTATCCAACCAAAAAGGTAACACAGCTTAGATaGCTCCTAGACCATCTTTGG +
Preference number: 5 (lower is better)
Translates to: TNVDLTRNHGVQRYPTKKVTQLR*LLDHLW
Trigger: CCAAAGATGGTCTAGGAGCAATCTAAGCTGTGTTAC...CTTTTTGGTTGGATACCTTTGAACTCCATGGTTACGTGTTAGGTCCACATTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp GACCTCTATTGCCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGAGATAGAGTCTTTACTTaGGGTGACTGCTTATTGAAC +
Preference number: 5 (lower is better)
Translates to: DLYCQYVHYLKMPPYYNGDRVFT*GDCLLN
Trigger: GTTCAATAAGCAGTCACCCAAAGTAAAGACTCTATC...TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp TGCTCTATAGAAGCAACTGATGCAGAGGTTGGTGTACATAACCTGATTACAGTAACACCATTTGGTCATTaGCAGGGTTTTGCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: CSIEATDAEVGVHNLITVTPFGH*QGFAFS
Trigger: GGAGAAAGCAAAACCCTGCAAATGACCAAATGGTGT...TACTGTAATCAGGTTATGTACACCAACCTCTGCATCAGTTGCTTCTATAGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp TGTGCACTACCTGAAGATGCCACCCTATTACAATGGAGTACTTACGTTTTTAGAACACCATTTGGTCATTaGCAGGGTTTTGCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: CALPEDATLLQWSTYVFRTPFGH*QGFAFS
Trigger: GGAGAAAGCAAAACCCTGCAAATGACCAAATGGTGT...TCTAAAAACGTAAGTACTCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp ACAAATGACAACAGCCCTGTGCTCAGCAGATTAAATGAGTGTGAAATCAAGACTTCACGACATGAAAGGTaGTGTCATGAAACCTCGCTT +
Preference number: 5 (lower is better)
Translates to: TNDNSPVLSRLNECEIKTSRHER*CHETSL
Trigger: AAGCGAGGTTTCATGACACAACCTTTCATGTCGTGA...AGTCTTGATTTCACACTCATTTAATCTGCTGAGCACAGGGCTGTTGTCATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp ACAAATGTGGACCTAACACGTAACCATGGAGTTCAAAGGTATCCAACCAAAAAGAAGGAAGCATGCTCCTaGCTCATCCAGTATAGGAAT +
Preference number: 5 (lower is better)
Translates to: TNVDLTRNHGVQRYPTKKKEACS*LIQYRN
Trigger: ATTCCTATACTGGATGAGCAAGGAGCATGCTTCCTT...CTTTTTGGTTGGATACCTTTGAACTCCATGGTTACGTGTTAGGTCCACATTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp TTCAGTGGTTTACATGCATCAGACAGATTTTTCGTTGCTGCCTGGCTCTTGAGCTACCTCAGTCATTTCTaGAAAATACTATATGCCTGG +
Preference number: 5 (lower is better)
Translates to: FSGLHASDRFFVAAWLLSYLSHF*KILYAW
Trigger: CCAGGCATATAGTATTTTCAAGAAATGACTGAGGTA...GCTCAAGAGCCAGGCAGCAACGAAAAATCTGTCTGATGCATGTAAACCACTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR CAA 90 bp AATTTTTGCATGAACACTGAGGAAAGGCCCAAAGATCCATCTAGAGCAGGTGGGAAATCCCTTCACAACTaGAATACGACATCGTTTTTG +
Preference number: 5 (lower is better)
Translates to: NFCMNTEERPKDPSRAGGKSLHN*NTTSFL
Trigger: CAAAAACGATGTCGTATTCAAGTTGTGAAGGGATTT...CCCACCTGCTCTAGATGGATCTTTGGGCCTTTCCTCAGTGTTCATGCAAAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp AGTGTGTACGATGATACGCCACCTGCAGCAGCATCCTGGAATATTACATCATTCAAATCCCTTCACAACTaGAATACGACATCGTTTTTG +
Preference number: 5 (lower is better)
Translates to: SVYDDTPPAAASWNITSFKSLHN*NTTSFL
Trigger: CAAAAACGATGTCGTATTCAAGTTGTGAAGGGATTT...GAATGATGTAATATTCCAGGATGCTGCTGCAGGTGGCGTATCATCGTACACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR CAA 90 bp GGACTTTTCAAGATGATATTACCAAACATAACGGAACCTAGTGAACACATTCCATCTTCTCTCACAGACTaGGGGTTTTCAGCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: GLFKMILPNITEPSEHIPSSLTD*GFSAAS
Trigger: AGAAGCTGCTGAAAACCCCAAGTCTGTGAGAGAAGA...TGGAATGTGTTCACTAGGTTCCGTTATGTTTGGTAATATCATCTTGAAAAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp AAACAGTCATCAACTACACTCATAGGATCAAGATATTTGGCAACTGACAGTCATCTTGTTCTGGCCGTTTaGTCAGTGATTGTGTCTCTC +
Preference number: 5 (lower is better)
Translates to: KQSSTTLIGSRYLATDSHLVLAV*SVIVSL
Trigger: GAGAGACACAATCACTGACAAAACGGCCAGAACAAG...ATGACTGTCAGTTGCCAAATATCTTGATCCTATGAGTGTAGTTGATGACTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp GACCTCTATTGCCAATATGTGCACTACCTGAAGATGCCACCCTATTACAATGGATTCCTGCCTCTTATGTaGGAAATTAGTGTAGTATCT +
Preference number: 5 (lower is better)
Translates to: DLYCQYVHYLKMPPYYNGFLPLM*EISVVS
Trigger: AGATACTACACTAATTTCCAACATAAGAGGCAGGAA...TCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACATATTGGCAATAGAGGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp AATGAAGCAAGTTGCCAAAGTCATAACGACCTTATTTTTCATCTACCGCTATCACTGTCTGCGAAGGACTaGAGGACAATGACAAAACTG +
Preference number: 5 (lower is better)
Translates to: NEASCQSHNDLIFHLPLSLSAKD*RTMTKL
Trigger: CAGTTTTGTCATTGTCCTCAAGTCCTTCGCAGACAG...TGATAGCGGTAGATGAAAAATAAGGTCGTTATGACTTTGGCAACTTGCTTCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp AGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGAAGGTTCTGTGGCTATTTGTaGTTTTTGGCAACGGCAAAA +
Preference number: 5 (lower is better)
Translates to: RNMMHTMGSMHHLQNVGRFCGYL*FLATAK
Trigger: TTTTGCCGTTGCCAAAAACAACAAATAGCCACAGAA...CCTTCCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CAA 90 bp TATAAGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGACCAAATCACCAACGTaGTATTTCAACAGGTGGTCT +
Preference number: 5 (lower is better)
Translates to: YKEHDAHYGIYASPSKCRTKSPT*YFNRWS
Trigger: AGACCACCTGTTGAAATACAACGTTGGTGATTTGGT...CCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420906.6
ENST00000512700.2
ENST00000514045.5
CDS-3UTR CAA 90 bp AAACAGTCATCAACTACACTCATAGGATCAAGATATTTGGCAACTGACAGTCATCCTCGCTCAGACTTTTaGGATGAGACAGATACTTCA +
Preference number: 5 (lower is better)
Translates to: KQSSTTLIGSRYLATDSHPRSDF*DETDTS
Trigger: TGAAGTATCTGTCTCATCCAAAAAGTCTGAGCGAGG...ATGACTGTCAGTTGCCAAATATCTTGATCCTATGAGTGTAGTTGATGACTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp CTATCAAACCTGGTGACAGCACCCAGTATTCCTAAAAGGAATCTGACCTTACATAAAGTGGACGTGTTATaGGCATTTCATTCAAATCCA +
Preference number: 5 (lower is better)
Translates to: LSNLVTAPSIPKRNLTLHKVDVL*AFHSNP
Trigger: TGGATTTGAATGAAATGCCAATAACACGTCCACTTT...ATGTAAGGTCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTTGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
ENST00000677895.1
CDS-3UTR CAA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCGTAACACAGCTTAGATaGCTCCTAGACCATCTTTGG +
Preference number: 5 (lower is better)
Translates to: TGNSNVLRLECITIILRFVTQLR*LLDHLW
Trigger: CCAAAGATGGTCTAGGAGCAATCTAAGCTGTGTTAC...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp ACAAATGTGGACCTAACACGTAACCATGGAGTTCAAAGGTATCCAACCAAAAAGGATAGAGTCTTTACTTaGGGTGACTGCTTATTGAAC +
Preference number: 5 (lower is better)
Translates to: TNVDLTRNHGVQRYPTKKDRVFT*GDCLLN
Trigger: GTTCAATAAGCAGTCACCCAAAGTAAAGACTCTATC...CTTTTTGGTTGGATACCTTTGAACTCCATGGTTACGTGTTAGGTCCACATTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp GGACTTTTCAAGATGATATTACCAAACATAACGGAACCTAGTGAACACATTCCACTCTTTGGACACCATTaGGTCATTTGCAGGGTTTTG +
Preference number: 5 (lower is better)
Translates to: GLFKMILPNITEPSEHIPLFGHH*VICRVL
Trigger: CAAAACCCTGCAAATGACCAAATGGTGTCCAAAGAG...TGGAATGTGTTCACTAGGTTCCGTTATGTTTGGTAATATCATCTTGAAAAGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGACTCTTTGGACACCATTaGGTCATTTGCAGGGTTTTG +
Preference number: 5 (lower is better)
Translates to: FLKILYAWMVSMLQNITRLFGHH*VICRVL
Trigger: CAAAACCCTGCAAATGACCAAATGGTGTCCAAAGAG...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp GGACTTTTCAAGATGATATTACCAAACATAACGGAACCTAGTGAACACATTCCACAGATATATAAAGGCTaGATGGCCCAATGGCTCTCA +
Preference number: 5 (lower is better)
Translates to: GLFKMILPNITEPSEHIPQIYKG*MAQWLS
Trigger: TGAGAGCCATTGGGCCATCAAGCCTTTATATATCTG...TGGAATGTGTTCACTAGGTTCCGTTATGTTTGGTAATATCATCTTGAAAAGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAGTACCTCCACAGTGTTaGCGTTTACAAATGACAACA +
Preference number: 5 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGVPPQC*RLQMTT
Trigger: TGTTGTCATTTGTAAACGCAAACACTGTGGAGGTAC...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCGGGAATGCAGTCTCCTaGATCTATTACAGGGACTTT +
Preference number: 5 (lower is better)
Translates to: TGNSNVLRLECITIILRFGNAVS*IYYRDF
Trigger: AAAGTCCCTGTAATAGATCAAGGAGACTGCATTCCC...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp TGTGCACTACCTGAAGATGCCACCCTATTACAATGGAGTACTTACGTTTTTAGATTAGCACGTTTCCACTaGGAGAGATTTCCTACATTA +
Preference number: 5 (lower is better)
Translates to: CALPEDATLLQWSTYVFRLARFH*ERFPTL
Trigger: TAATGTAGGAAATCTCTCCAAGTGGAAACGTGCTAA...TCTAAAAACGTAAGTACTCCATTGTAATAGGGTGGCATCTTCAGGTAGTGCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp TATAAGGAACATGATGCACACTATGGGATCTATGCATCACCTTCAAAATGTAGGAGAACAAAGAAATCTTaGGCTTCCTCCATGAGCCTA +
Preference number: 5 (lower is better)
Translates to: YKEHDAHYGIYASPSKCRRTKKS*ASSMSL
Trigger: TAGGCTCATGGAGGAAGCCAAAGATTTCTTTGTTCT...CCTACATTTTGAAGGTGATGCATAGATCCCATAGTGTGCATCATGTTCCTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420906.6
ENST00000514045.5
CDS-3UTR CAA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAAACCAAATCACCAACGTaGTATTTCAACAGGTGGTCT +
Preference number: 5 (lower is better)
Translates to: STTSTIYSISNEMHLERKTKSPT*YFNRWS
Trigger: AGACCACCTGTTGAAATACAACGTTGGTGATTTGGT...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp AAACAGTCATCAACTACACTCATAGGATCAAGATATTTGGCAACTGACAGTCATACCAAATCACCAACGTaGTATTTCAACAGGTGGTCT +
Preference number: 5 (lower is better)
Translates to: KQSSTTLIGSRYLATDSHTKSPT*YFNRWS
Trigger: AGACCACCTGTTGAAATACAACGTTGGTGATTTGGT...ATGACTGTCAGTTGCCAAATATCTTGATCCTATGAGTGTAGTTGATGACTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000508803.6
ENST00000677559.1
CDS-3UTR CAA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCGAAGGAGATGAACTTTaGCTAAACCCAAGAGCTGAA +
Preference number: 5 (lower is better)
Translates to: TGNSNVLRLECITIILRFEGDEL*LNPRAE
Trigger: TTCAGCTCTTGGGTTTAGCAAAAGTTCATCTCCTTC...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp TCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGAAAGAAGGAGATGAACTTTaGCTAAACCCAAGAGCTGAA +
Preference number: 5 (lower is better)
Translates to: STTSTIYSISNEMHLERKEGDEL*LNPRAE
Trigger: TTCAGCTCTTGGGTTTAGCAAAAGTTCATCTCCTTC...TTTCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp TATTACATCATTCTAAGTGCAGTACAGAGCAGCTGGGTTCAAATCCAACTTGACTTCCTGCCTCTTATGTaGGAAATTAGTGTAGTATCT +
Preference number: 5 (lower is better)
Translates to: YYIILSAVQSSWVQIQLDFLPLM*EISVVS
Trigger: AGATACTACACTAATTTCCAACATAAGAGGCAGGAA...GTCAAGTTGGATTTGAACCCAGCTGCTCTGTACTGCACTTAGAATGATGTAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678714.1
CDS-3UTR CAA 90 bp AGTCTACAACATCTACGATCTATTCCATATCCAACGAGATGCATTTGGAAAGGACTAATTACAGTCAATTaGACATCACTGCCAGGTAAA +
Preference number: 5 (lower is better)
Translates to: SLQHLRSIPYPTRCIWKGLITVN*TSLPGK
Trigger: TTTACCTGGCAGTGATGTCAAATTGACTGTAATTAG...TCCTTTCCAAATGCATCTCGTTGGATATGGAATAGATCGTAGATGTTGTAGACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp TTCTTGAAAATACTATATGCCTGGATGGTCAGCATGCTTCAAAATATTACCCGATACCTCAGTCATTTCTaGAAAATACTATATGCCTGG +
Preference number: 5 (lower is better)
Translates to: FLKILYAWMVSMLQNITRYLSHF*KILYAW
Trigger: CCAGGCATATAGTATTTTCAAGAAATGACTGAGGTA...TCGGGTAATATTTTGAAGCATGCTGACCATCCAGGCATATAGTATTTTCAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS-3UTR CAA 90 bp ACCGGCAATTCAAATGTCTTAAGGCTAGAATGTATCACCATTATTTTGAGGTTCAAATCCCTTCACAACTaGAATACGACATCGTTTTTG +
Preference number: 5 (lower is better)
Translates to: TGNSNVLRLECITIILRFKSLHN*NTTSFL
Trigger: CAAAAACGATGTCGTATTCAAGTTGTGAAGGGATTT...GAACCTCAAAATAATGGTGATACATTCTAGCCTTAAGACATTTGAATTGCCGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398261.6
ENST00000503128.5
ENST00000678714.1
CDS GCA 72 bp CAGACTGGGCAACATGGTGATGGCGAGACCCATCTCTaGGGTGCGTCGCATCCTCGGCGGGCGGCTCTCCGG +
Preference number: 6 (lower is better)
Translates to: QTGQHGDGETHL*GASHPRRAALR
Trigger: CCGGAGAGCCGCCCGCCGAGGATGCGACGCACCGCAGAGATGGGTCTCGCCATCACCATGTTGCCCAGTCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507820.5
CDS GCA 72 bp AGGTGTCCTCTCATCATCCTCACAGACCCCAGACTGTaGCGGGCGACACCTGAGGCACACTCGCTGCAGGTG +
Preference number: 6 (lower is better)
Translates to: RCPLIILTDPRL*RATPEAHSLQV
Trigger: CACCTGCAGCGAGTGTGCCTCAGGTGTCGCCCGGCACAGTCTGGGGTCTGTGAGGATGATGAGAGGACACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382888.3
CDS GCA 72 bp TTGGGCCCGGTGAGTAGGCAGGAAGGGCCACGGCTGTaGAGGTGTCCTCTCATCATCCTCACAGACCCCAGA +
Preference number: 6 (lower is better)
Translates to: LGPVSRQEGPRL*RCPLIILTDPR
Trigger: TCTGGGGTCTGTGAGGATGATGAGAGGACACCTGCACAGCCGTGGCCCTTCCTGCCTACTCACCGGGCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382888.3
CDS CAA 72 bp CACTCGCGGTTCACCTCGCAGCTCGGAGTCTTCCCGTaGGCACTGCCGAGGATTTCTGGTGCCTGCTTCATC +
Preference number: 6 (lower is better)
Translates to: HSRFTSQLGVFP*ALPRISGACFI
Trigger: GATGAAGCAGGCACCAGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGAGCTGCGAGGTGAACCGCGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000398261.6
ENST00000420906.6
ENST00000503128.5
ENST00000508355.5
ENST00000508803.6
ENST00000509115.5
ENST00000512700.2
ENST00000514045.5
ENST00000515806.1
ENST00000677559.1
ENST00000678714.1
CDS CAA 90 bp CGCTTCCCCTTCCGAGCAGTGAAGTGGGCAGTGCAGATGATGCTGTaGGAGGCGATCACTGAGCATCCTGAGGCACACTCGCTGCAGGTG +
Preference number: 6 (lower is better)
Translates to: RFPFRAVKWAVQMML*EAITEHPEAHSLQV
Trigger: CACCTGCAGCGAGTGTGCCTCAGGATGCTCAGTGATCGCCTCCAACAGCATCATCTGCACTGCCCACTTCACTGCTCGGAAGGGGAAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514329.5
CDS TCA 72 bp GCCCGAGATGTCCACAGTACTGAGGTGGAGGACACCTaGCGTGCAGCAATAGGGGGCTGCTGGTGTCTGCAA +
Preference number: 6 (lower is better)
Translates to: ARDVHSTEVEDT*RAAIGGCWCLQ
Trigger: TTGCAGACACCAGCAGCCCCCTATTGCTGCACGTCAGGTGTCCTCCACCTCAGTACTGTGGACATCTCGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
ENST00000420906.6
ENST00000503128.5
CDS GCA 72 bp GCGTCGTGGCCGTTAAACTTCTGCATGACCCCCTCCTaGAGGCTACTGGAGAGCTGGGCTTTGCTGAGGAAC +
Preference number: 6 (lower is better)
Translates to: ASWPLNFCMTPS*RLLESWALLRN
Trigger: GTTCCTCAGCAAAGCCCAGCTCTCCAGTAGCCTGCAGGAGGGGGTCATGCAGAAGTTTAACGGCCACGACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000398261.6
ENST00000420906.6
ENST00000503128.5
ENST00000508355.5
ENST00000508803.6
ENST00000509115.5
ENST00000512700.2
ENST00000514045.5
ENST00000515806.1
ENST00000677559.1
ENST00000678714.1
CDS GCA 72 bp GGAATAAAGGGCAGGGCGTCGTGGCCGTTAAACTTCTaGATGACCCCCTCCTGCAGGCTACTGGAGAGCTGG +
Preference number: 6 (lower is better)
Translates to: GIKGRASWPLNF*MTPSCRLLESW
Trigger: CCAGCTCTCCAGTAGCCTGCAGGAGGGGGTCATGCAGAAGTTTAACGGCCACGACGCCCTGCCCTTTATTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000398261.6
ENST00000420906.6
ENST00000503128.5
ENST00000508355.5
ENST00000508803.6
ENST00000509115.5
ENST00000512700.2
ENST00000514045.5
ENST00000515806.1
ENST00000677559.1
ENST00000678714.1
CDS CCA 72 bp ACTCGCGGTTCACCTCGCAGCTCGGAGTCTTCCCGTTaGCACTGCCGAGGATTTCTGGTGCCTGCTTCATCT +
Preference number: 6 (lower is better)
Translates to: TRGSPRSSESSR*HCRGFLVPASS
Trigger: AGATGAAGCAGGCACCAGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGAGCTGCGAGGTGAACCGCGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000398261.6
ENST00000420906.6
ENST00000503128.5
ENST00000508355.5
ENST00000508803.6
ENST00000509115.5
ENST00000512700.2
ENST00000514045.5
ENST00000515806.1
ENST00000677559.1
ENST00000678714.1
CDS CAA 90 bp AACTTCTGCATGACCCCCTCCTGCAGGCTACTGGAGAGCTGGGCTTaGCTGAGGAACACAGAACACTCGCGGTTCACCTCGCAGCTCGGA +
Preference number: 6 (lower is better)
Translates to: NFCMTPSCRLLESWA*LRNTEHSRFTSQLG
Trigger: TCCGAGCTGCGAGGTGAACCGCGAGTGTTCTGTGTTCCTCAGCAAAGCCCAGCTCTCCAGTAGCCTGCAGGAGGGGGTCATGCAGAAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000398261.6
ENST00000420906.6
ENST00000503128.5
ENST00000508355.5
ENST00000508803.6
ENST00000509115.5
ENST00000512700.2
ENST00000514045.5
ENST00000515806.1
ENST00000677559.1
ENST00000678714.1
CDS CAA 90 bp GGAGTAAGCTGTCTTGGTCCACACATGAGAGCCTTCCGAATACCCTaGCACACCCACCACTGCCTCTCCTTACCCAGCCTCCAGGTGGCC +
Preference number: 6 (lower is better)
Translates to: GVSCLGPHMRAFRIP*HTHHCLSLPSLQVA
Trigger: GGCCACCTGGAGGCTGGGTAAGGAGAGGCAGTGGTGGGTGTGCAAGGGTATTCGGAAGGCTCTCATGTGTGGACCAAGACAGCTTACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679039.1
CDS CAA 90 bp GGGCAACACAACAGTGAGACCTCGTCTCTTTTGACGGCCTTGGGTTaGAAGGGTTGGAAGCATGGCAGCTCACACAGCTGTGGAGGGGGC +
Preference number: 6 (lower is better)
Translates to: GQHNSETSSLLTALG*KGWKHGSSHSCGGG
Trigger: GCCCCCTCCACAGCTGTGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAAGGCCGTCAAAAGAGACGAGGTCTCACTGTTGTGTTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505643.5
CDS TCA 72 bp TATCATTCTGGGCAGGCAGACAGACACTCCCATAAGTaGGGTGCTGCTGTGGGGCTGCCATGGCCTGGGAGA +
Preference number: 6 (lower is better)
Translates to: YHSGQADRHSHK*GAAVGLPWPGR
Trigger: TCTCCCAGGCCATGGCAGCCCCACAGCAGCACCTCACTTATGGGAGTGTCTGTCTGCCTGCCCAGAATGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382888.3
CDS GCA 72 bp CCCAGGCTACGGTGCAGTGATGCCATCACGACTCACTaGAAACCCCACCTTCAGGACTCAAGGGATCCTCCT +
Preference number: 6 (lower is better)
Translates to: PRLRCSDAITTH*KPHLQDSRDPP
Trigger: AGGAGGATCCCTTGAGTCCTGAAGGTGGGGTTTGCAGTGAGTCGTGATGGCATCACTGCACCGTAGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508355.5
CDS CCA 72 bp TTCAGCTTGTCGGCTGGAATAAAGGGCAGGGCGTCGTaGCCGTTAAACTTCTGCATGACCCCCTCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: FSLSAGIKGRAS*PLNFCMTPSCR
Trigger: CCTGCAGGAGGGGGTCATGCAGAAGTTTAACGGCCACGACGCCCTGCCCTTTATTCCAGCCGACAAGCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000398261.6
ENST00000420906.6
ENST00000503128.5
ENST00000508355.5
ENST00000508803.6
ENST00000509115.5
ENST00000512700.2
ENST00000514045.5
ENST00000515806.1
ENST00000677559.1
ENST00000678714.1
CDS CCA 72 bp ACCTCGTCTCTTTTGACGGCCTTGGGTTTGAAGGGTTaGAAGCATGGCAGCTCACACAGCTGTGGAGGGGGC +
Preference number: 6 (lower is better)
Translates to: TSSLLTALGLKG*KHGSSHSCGGG
Trigger: GCCCCCTCCACAGCTGTGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAAGGCCGTCAAAAGAGACGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505643.5
CDS CAA 72 bp GACCTCGTCTCTTTTGACGGCCTTGGGTTTGAAGGGTaGGAAGCATGGCAGCTCACACAGCTGTGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: DLVSFDGLGFEG*EAWQLTQLWRG
Trigger: CCCCCTCCACAGCTGTGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAAGGCCGTCAAAAGAGACGAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505643.5
CDS CAA 72 bp TCTCCCGGGCTGTCCGAGACCTTCCGAAGACTGTGCTaGTCCGTCCTGAGTCTTTTCCTGGGTGTGTCCTCA +
Preference number: 6 (lower is better)
Translates to: SPGLSETFRRLC*SVLSLFLGVSS
Trigger: TGAGGACACACCCAGGAAAAGACTCAGGACGGACAAGCACAGTCTTCGGAAGGTCTCGGACAGCCCGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513726.5
CDS CCA 72 bp AGAGGCCTTTCCTCCTTGAGAGCAGCTGGCCAGTGGTaGAGCAGTCACTTATCATTCTGGGCAGGCAGACAG +
Preference number: 6 (lower is better)
Translates to: RGLSSLRAAGQW*SSHLSFWAGRQ
Trigger: CTGTCTGCCTGCCCAGAATGATAAGTGACTGCTCCACCACTGGCCAGCTGCTCTCAAGGAGGAAAGGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382888.3
CDS CCA 72 bp TCTTTTGACGGCCTTGGGTTTGAAGGGTTGGAAGCATaGCAGCTCACACAGCTGTGGAGGGGGCAGCGGAAA +
Preference number: 6 (lower is better)
Translates to: SFDGLGFEGLEA*QLTQLWRGQRK
Trigger: TTTCCGCTGCCCCCTCCACAGCTGTGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAAGGCCGTCAAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505643.5
ENST00000677559.1
CDS CAA 72 bp TGTCTTGGTCCACACATGAGAGCCTTCCGAATACCCTaGCACACCCACCACTGCCTCTCCTTACCCAGCCTC +
Preference number: 6 (lower is better)
Translates to: CLGPHMRAFRIP*HTHHCLSLPSL
Trigger: GAGGCTGGGTAAGGAGAGGCAGTGGTGGGTGTGCAAGGGTATTCGGAAGGCTCTCATGTGTGGACCAAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679039.1
CDS CAA 90 bp AACACAGAACACTCGCGGTTCACCTCGCAGCTCGGAGTCTTCCCGTaGGCACTGCCGAGGATTTCTGGTGCCTGCTTCATCTTTATGCAC +
Preference number: 6 (lower is better)
Translates to: NTEHSRFTSQLGVFP*ALPRISGACFIFMH
Trigger: GTGCATAAAGATGAAGCAGGCACCAGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGAGCTGCGAGGTGAACCGCGAGTGTTCTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000398261.6
ENST00000420906.6
ENST00000503128.5
ENST00000508355.5
ENST00000508803.6
ENST00000509115.5
ENST00000512700.2
ENST00000514045.5
ENST00000515806.1
ENST00000677559.1
ENST00000678714.1
CDS CCA 72 bp ACATCAACCTGGGGCCAGCGTGGCTCTATCCATACCTaGTTCCACGTCCCCCTGCCAGATTATTCTGAAGCA +
Preference number: 6 (lower is better)
Translates to: TSTWGQRGSIHT*FHVPLPDYSEA
Trigger: TGCTTCAGAATAATCTGGCAGGGGGACGTGGAACCAGGTATGGATAGAGCCACGCTGGCCCCAGGTTGATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482415.6
CDS CCA 72 bp ACTCTATCTCTTTTGACGGCCTTGGGTTTGAAGGGTTaGAAGCATGGCAGCTCACACAGCTGTGGAGGGGGC +
Preference number: 6 (lower is better)
Translates to: TLSLLTALGLKG*KHGSSHSCGGG
Trigger: GCCCCCTCCACAGCTGTGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAAGGCCGTCAAAAGAGATAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677559.1
CDS CAA 72 bp GCCCAGATGCTTCCGTTCTTAGAACACTCTGATGGGTaGCGGTCATGGATGCTGCTGCATCTCCTGCAACGC +
Preference number: 6 (lower is better)
Translates to: AQMLPFLEHSDG*RSWMLLHLLQR
Trigger: GCGTTGCAGGAGATGCAGCAGCATCCATGACCGCAACCCATCAGAGTGTTCTAAGAACGGAAGCATCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
ENST00000420906.6
ENST00000503128.5
CDS CAA 72 bp GACTCTATCTCTTTTGACGGCCTTGGGTTTGAAGGGTaGGAAGCATGGCAGCTCACACAGCTGTGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: DSISFDGLGFEG*EAWQLTQLWRG
Trigger: CCCCCTCCACAGCTGTGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAAGGCCGTCAAAAGAGATAGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677559.1
CDS CAA 90 bp TTCCATCCAGCCCAGATGCTTCCGTTCTTAGAACACTCTGATGGGTaGCGGTCATGGATGCTGCTGCATCTCCTGCAACGCACAGGATGC +
Preference number: 6 (lower is better)
Translates to: FHPAQMLPFLEHSDG*RSWMLLHLLQRTGC
Trigger: GCATCCTGTGCGTTGCAGGAGATGCAGCAGCATCCATGACCGCAACCCATCAGAGTGTTCTAAGAACGGAAGCATCTGGGCTGGATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
ENST00000420906.6
ENST00000503128.5
CDS CAA 90 bp GCGCCGGGTTCTCCATTAAACACCCGGGAAGTAAGATCTTTCAGCTaGTCGGCTGGAATAAAGGGCAGGGCGTCGTGGCCGTTAAACTTC +
Preference number: 6 (lower is better)
Translates to: APGSPLNTREVRSFS*SAGIKGRASWPLNF
Trigger: GAAGTTTAACGGCCACGACGCCCTGCCCTTTATTCCAGCCGACAAGCTGAAAGATCTTACTTCCCGGGTGTTTAATGGAGAACCCGGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000398261.6
ENST00000420906.6
ENST00000503128.5
ENST00000508355.5
ENST00000508803.6
ENST00000509115.5
ENST00000512700.2
ENST00000514045.5
ENST00000515806.1
ENST00000677559.1
ENST00000678714.1
CDS CAA 90 bp GGGGGTGTCCCAATCCCTTTCATTTCCTGGGACTCAAAACGCAGTTaGGCATCGTGTGCGCCGGGTTCTCCATTAAACACCCGGGAAGTA +
Preference number: 6 (lower is better)
Translates to: GGVPIPFISWDSKRS*ASCAPGSPLNTREV
Trigger: TACTTCCCGGGTGTTTAATGGAGAACCCGGCGCACACGATGCCAAACTGCGTTTTGAGTCCCAGGAAATGAAAGGGATTGGGACACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000398261.6
ENST00000420906.6
ENST00000503128.5
ENST00000508355.5
ENST00000508803.6
ENST00000509115.5
ENST00000512700.2
ENST00000514045.5
ENST00000515806.1
ENST00000677559.1
ENST00000678714.1
CDS CAA 90 bp ACAGAGCAAGACTCTATCTCTTTTGACGGCCTTGGGTTTGAAGGGTaGGAAGCATGGCAGCTCACACAGCTGTGGAGGGGGCAGCGGAAA +
Preference number: 6 (lower is better)
Translates to: TEQDSISFDGLGFEG*EAWQLTQLWRGQRK
Trigger: TTTCCGCTGCCCCCTCCACAGCTGTGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAAGGCCGTCAAAAGAGATAGAGTCTTGCTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677559.1
CDS TCA 72 bp CCATCCAGCCCAGATGCTTCCGTTCTTAGAACACTCTaGTGGGTTGCGGTCATGGATGCTGCTGCATCTCCT +
Preference number: 6 (lower is better)
Translates to: PSSPDASVLRTL*WVAVMDAAASP
Trigger: AGGAGATGCAGCAGCATCCATGACCGCAACCCATCAGAGTGTTCTAAGAACGGAAGCATCTGGGCTGGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382892.6
ENST00000382895.7
ENST00000420906.6
ENST00000503128.5
CDS TCA 72 bp TGTCCGAGACCTTCCGAAGACTGTGCTTGTCCGTCCTaGGTCTTTTCCTGGGTGTGTCCTCAGCTTCAGCAT +
Preference number: 6 (lower is better)
Translates to: CPRPSEDCACPS*VFSWVCPQLQH
Trigger: ATGCTGAAGCTGAGGACACACCCAGGAAAAGACTCAGGACGGACAAGCACAGTCTTCGGAAGGTCTCGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513726.5
CDS CCA 72 bp AAAAGAGGCCTTTCCTCCTTGAGAGCAGCTGGCCAGTaGTGGAGCAGTCACTTATCATTCTGGGCAGGCAGA +
Preference number: 6 (lower is better)
Translates to: KRGLSSLRAAGQ*WSSHLSFWAGR
Trigger: TCTGCCTGCCCAGAATGATAAGTGACTGCTCCACCACTGGCCAGCTGCTCTCAAGGAGGAAAGGCCTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382888.3
CDS TCA 72 bp AGGCATTGTTCTGGCAGCCCCAGGAAACACGTTCAGTaGGGAACTCTTAACCACTGGCCTTTGTTGAGAGCC +
Preference number: 6 (lower is better)
Translates to: RHCSGSPRKHVQ*GTLNHWPLLRA
Trigger: GGCTCTCAACAAAGGCCAGTGGTTAAGAGTTCCTCACTGAACGTGTTTCCTGGGGCTGCCAGAACAATGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515695.1
CDS GCA 72 bp GCAACCCGCAGTCTCCACAGAAAAGCAGACAGCTCGTaGCACCACAAGTGTCCAGAATTTTATGCCCAGGTA +
Preference number: 6 (lower is better)
Translates to: ATRSLHRKADSS*HHKCPEFYAQV
Trigger: TACCTGGGCATAAAATTCTGGACACTTGTGGTGGCACGAGCTGTCTGCTTTTCTGTGGAGACTGCGGGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382895.7
ENST00000420906.6
CDS GCA 72 bp CATTTCCTGGGACTCAAAACGCAGTTTGGCATCGTGTaGGCCGGGTTCTCCATTAAACACCCGGGAAGTAAG +
Preference number: 6 (lower is better)
Translates to: HFLGLKTQFGIV*AGFSIKHPGSK
Trigger: CTTACTTCCCGGGTGTTTAATGGAGAACCCGGCGCACACGATGCCAAACTGCGTTTTGAGTCCCAGGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000398261.6
ENST00000420906.6
ENST00000503128.5
ENST00000508355.5
ENST00000508803.6
ENST00000509115.5
ENST00000512700.2
ENST00000514045.5
ENST00000515806.1
ENST00000677559.1
ENST00000678714.1
CDS GCA 72 bp GTCCCTTCTGCACCTCTTACCACAAGGGAAGCCGTCTaGTTCTGTCTCCAGTGGCAGAAAATCCCATTTTGC +
Preference number: 6 (lower is better)
Translates to: VPSAPLTTREAV*FCLQWQKIPFC
Trigger: GCAAAATGGGATTTTCTGCCACTGGAGACAGAAGCAGACGGCTTCCCTTGTGGTAAGAGGTGCAGAAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513726.5
CDS CCA 72 bp TCCTATGAAAAGAGGCCTTTCCTCCTTGAGAGCAGCTaGCCAGTGGTGGAGCAGTCACTTATCATTCTGGGC +
Preference number: 6 (lower is better)
Translates to: SYEKRPFLLESS*PVVEQSLIILG
Trigger: GCCCAGAATGATAAGTGACTGCTCCACCACTGGCCAGCTGCTCTCAAGGAGGAAAGGCCTCTTTTCATAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382888.3
CDS CAA 72 bp AAAGAAGGGGCTCCTATGAAAAGAGGCCTTTCCTCCTaGAGAGCAGCTGGCCAGTGGTGGAGCAGTCACTTA +
Preference number: 6 (lower is better)
Translates to: KEGAPMKRGLSS*RAAGQWWSSHL
Trigger: TAAGTGACTGCTCCACCACTGGCCAGCTGCTCTCAAGGAGGAAAGGCCTCTTTTCATAGGAGCCCCTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382888.3
CDS CAA 72 bp CAACACAACAGTGAGACCTCGTCTCTTTTGACGGCCTaGGGTTTGAAGGGTTGGAAGCATGGCAGCTCACAC +
Preference number: 6 (lower is better)
Translates to: QHNSETSSLLTA*GLKGWKHGSSH
Trigger: GTGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAAGGCCGTCAAAAGAGACGAGGTCTCACTGTTGTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505643.5
CDS CAA 90 bp AGAAGCTTGAAAGAAGGGGCTCCTATGAAAAGAGGCCTTTCCTCCTaGAGAGCAGCTGGCCAGTGGTGGAGCAGTCACTTATCATTCTGG +
Preference number: 6 (lower is better)
Translates to: RSLKEGAPMKRGLSS*RAAGQWWSSHLSFW
Trigger: CCAGAATGATAAGTGACTGCTCCACCACTGGCCAGCTGCTCTCAAGGAGGAAAGGCCTCTTTTCATAGGAGCCCCTTCTTTCAAGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382888.3
CDS TCA 72 bp CTTGTTGTACTGAAAACCGTGGTGTCCTGTGTCCACTaGGACAGGACACCCCCAAACCAGTCCTGTTTCTCT +
Preference number: 6 (lower is better)
Translates to: LVVLKTVVSCVH*DRTPPNQSCFS
Trigger: AGAGAAACAGGACTGGTTTGGGGGTGTCCTGTCTCAGTGGACACAGGACACCACGGTTTTCAGTACAACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677895.1
CDS GCA 72 bp CGGAGTCTTCCCGTTGGCACTGCCGAGGATTTCTGGTaGCTGCTTCATCTTTATGCACTTTACAACACTCTG +
Preference number: 6 (lower is better)
Translates to: RSLPVGTAEDFW*LLHLYALYNTL
Trigger: CAGAGTGTTGTAAAGTGCATAAAGATGAAGCAGGCACCAGAAATCCTCGGCAGTGCCAACGGGAAGACTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000398261.6
ENST00000420906.6
ENST00000503128.5
ENST00000507820.5
ENST00000508355.5
ENST00000508803.6
ENST00000509115.5
ENST00000512700.2
ENST00000514045.5
ENST00000515806.1
ENST00000677559.1
ENST00000678714.1
CDS CCA 72 bp GCTCGGAGTCTTCCCGTTGGCACTGCCGAGGATTTCTaGTGCCTGCTTCATCTTTATGCACTTTACAACACT +
Preference number: 6 (lower is better)
Translates to: ARSLPVGTAEDF*CLLHLYALYNT
Trigger: AGTGTTGTAAAGTGCATAAAGATGAAGCAGGCACCAGAAATCCTCGGCAGTGCCAACGGGAAGACTCCGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000398261.6
ENST00000420906.6
ENST00000503128.5
ENST00000507820.5
ENST00000508355.5
ENST00000508803.6
ENST00000509115.5
ENST00000512700.2
ENST00000514045.5
ENST00000515806.1
ENST00000677559.1
ENST00000678714.1
CDS CCA 72 bp AAACACCCGGGAAGTAAGATCTTTCAGCTTGTCGGCTaGAATAAAGGGCAGGGCGTCGTGGCCGTTAAACTT +
Preference number: 6 (lower is better)
Translates to: KHPGSKIFQLVG*NKGQGVVAVKL
Trigger: AAGTTTAACGGCCACGACGCCCTGCCCTTTATTCCAGCCGACAAGCTGAAAGATCTTACTTCCCGGGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000398261.6
ENST00000420906.6
ENST00000503128.5
ENST00000508355.5
ENST00000508803.6
ENST00000509115.5
ENST00000512700.2
ENST00000514045.5
ENST00000515806.1
ENST00000677559.1
ENST00000678714.1
CDS CCA 72 bp CTTACCACAAGGGAAGCCGTCTGCTTCTGTCTCCAGTaGCAGAAAATCCCATTTTGCTGGCACACATACTCC +
Preference number: 6 (lower is better)
Translates to: LTTREAVCFCLQ*QKIPFCWHTYS
Trigger: GGAGTATGTGTGCCAGCAAAATGGGATTTTCTGCCACTGGAGACAGAAGCAGACGGCTTCCCTTGTGGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513726.5
CDS CCA 72 bp AGGCTTATTCACCTGCAGGGAAGGAGTAAGCTGTCTTaGTCCACACATGAGAGCCTTCCGAATACCCTTGCA +
Preference number: 6 (lower is better)
Translates to: RLIHLQGRSKLS*STHESLPNTLA
Trigger: TGCAAGGGTATTCGGAAGGCTCTCATGTGTGGACCAAGACAGCTTACTCCTTCCCTGCAGGTGAATAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679039.1
CDS CAA 72 bp CCAATCCCTTTCATTTCCTGGGACTCAAAACGCAGTTaGGCATCGTGTGCGCCGGGTTCTCCATTAAACACC +
Preference number: 6 (lower is better)
Translates to: PIPFISWDSKRS*ASCAPGSPLNT
Trigger: GGTGTTTAATGGAGAACCCGGCGCACACGATGCCAAACTGCGTTTTGAGTCCCAGGAAATGAAAGGGATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000398261.6
ENST00000420906.6
ENST00000503128.5
ENST00000508355.5
ENST00000508803.6
ENST00000509115.5
ENST00000512700.2
ENST00000514045.5
ENST00000515806.1
ENST00000677559.1
ENST00000678714.1
CDS CAA 72 bp CAGAGCAAGACTCTATCTCTTTTGACGGCCTTGGGTTaGAAGGGTTGGAAGCATGGCAGCTCACACAGCTGT +
Preference number: 6 (lower is better)
Translates to: QSKTLSLLTALG*KGWKHGSSHSC
Trigger: ACAGCTGTGTGAGCTGCCATGCTTCCAACCCTTCAAACCCAAGGCCGTCAAAAGAGATAGAGTCTTGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677559.1
CDS TCA 72 bp TTTTTCGTTGCTTCCGAAGACTGTGCTTGTCCGTCCTaGGTCTTTTCCTGGGTGTGTCCTCAGCTTCAGCAT +
Preference number: 6 (lower is better)
Translates to: FFVASEDCACPS*VFSWVCPQLQH
Trigger: ATGCTGAAGCTGAGGACACACCCAGGAAAAGACTCAGGACGGACAAGCACAGTCTTCGGAAGCAACGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511904.1
CDS GCA 72 bp AGCGTGGCTCTATCCATACCTGGTTCCACGTCCCCCTaGCAGATTATTCTGAAGCAAATCCCAGACATATCA +
Preference number: 6 (lower is better)
Translates to: SVALSIPGSTSP*QIILKQIPDIS
Trigger: TGATATGTCTGGGATTTGCTTCAGAATAATCTGGCAGGGGGACGTGGAACCAGGTATGGATAGAGCCACGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482415.6
CDS GCA 72 bp CATCCAGCCCAGATGCTTCCGTTCTTAGAACACTCGTaGCACCACAAGTGTCCAGAATTTTATGCCCAGGTA +
Preference number: 6 (lower is better)
Translates to: HPAQMLPFLEHS*HHKCPEFYAQV
Trigger: TACCTGGGCATAAAATTCTGGACACTTGTGGTGGCACGAGTGTTCTAAGAACGGAAGCATCTGGGCTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507820.5
CDS CAA 72 bp ATCAGACAGATTTTTCGTTGCTTCCGAAGACTGTGCTaGTCCGTCCTGAGTCTTTTCCTGGGTGTGTCCTCA +
Preference number: 6 (lower is better)
Translates to: IRQIFRCFRRLC*SVLSLFLGVSS
Trigger: TGAGGACACACCCAGGAAAAGACTCAGGACGGACAAGCACAGTCTTCGGAAGCAACGAAAAATCTGTCTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511904.1
CDS CAA 90 bp GTCCAAGCATTCTCCAGCAAAAAGATCCAGCCATCAAGGATTACCTaGCTGCGATCTGAGCTCCAGCTTCACCTGAAATACAGGAGAATC +
Preference number: 6 (lower is better)
Translates to: VQAFSSKKIQPSRIT*LRSELQLHLKYRRI
Trigger: GATTCTCCTGTATTTCAGGTGAAGCTGGAGCTCAGATCGCAGCAAGGTAATCCTTGATGGCTGGATCTTTTTGCTGGAGAATGCTTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382888.3
CDS GCA 72 bp CGTGGAAGCCCGATTTCGCTTCTTCAGTGGTTTACATaGATCAGACAGATTTTTCGTTGCTTCCGAAGACTG +
Preference number: 6 (lower is better)
Translates to: RGSPISLLQWFT*IRQIFRCFRRL
Trigger: CAGTCTTCGGAAGCAACGAAAAATCTGTCTGATGCATGTAAACCACTGAAGAAGCGAAATCGGGCTTCCACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511904.1
CDS CCA 72 bp AGATGCTGCCGTGGAAGCCCGATTTCGCTTCTTCAGTaGTTTACATGCATCAGACAGATTTTTCGTTGCTGT +
Preference number: 6 (lower is better)
Translates to: RCCRGSPISLLQ*FTCIRQIFRCC
Trigger: ACAGCAACGAAAAATCTGTCTGATGCATGTAAACCACTGAAGAAGCGAAATCGGGCTTCCACGGCAGCATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482415.6
CDS CCA 72 bp AGATGCTGCCGTGGAAGCCCGATTTCGCTTCTTCAGTaGTTTACATGCATCAGACAGATTTTTCGTTGCTTC +
Preference number: 6 (lower is better)
Translates to: RCCRGSPISLLQ*FTCIRQIFRCF
Trigger: GAAGCAACGAAAAATCTGTCTGATGCATGTAAACCACTGAAGAAGCGAAATCGGGCTTCCACGGCAGCATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511904.1
CDS CAA 72 bp TTCTCCAGCAAAAAGATCCAGCCATCAAGGATTACCTaGCTGCGATCTGAGCTCCAGCTTCACCTGAAATAC +
Preference number: 6 (lower is better)
Translates to: FSSKKIQPSRIT*LRSELQLHLKY
Trigger: GTATTTCAGGTGAAGCTGGAGCTCAGATCGCAGCAAGGTAATCCTTGATGGCTGGATCTTTTTGCTGGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382888.3
CDS TCA 72 bp AAAGATCCAGCCATCAAGGATTACCTTGCTGCGATCTaGGCTCCAGCTTCACCTGAAATACAGGAGAATCTT +
Preference number: 6 (lower is better)
Translates to: KDPAIKDYLAAI*APASPEIQENL
Trigger: AAGATTCTCCTGTATTTCAGGTGAAGCTGGAGCTCAGATCGCAGCAAGGTAATCCTTGATGGCTGGATCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382888.3
CDS CCA 72 bp TTTCTGACCTTTAAGTTTGGTATAGCTGTGAAGGAGTaGATCTGCAGAAACCATGCAAGGCCACCAAGGGTA +
Preference number: 6 (lower is better)
Translates to: FLTFKFGIAVKE*ICRNHARPPRV
Trigger: TACCCTTGGTGGCCTTGCATGGTTTCTGCAGATCCACTCCTTCACAGCTATACCAAACTTAAAGGTCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000398261.6
ENST00000420906.6
ENST00000503128.5
ENST00000508355.5
ENST00000508803.6
ENST00000509115.5
ENST00000512700.2
ENST00000514045.5
ENST00000677559.1
CDS TCA 72 bp GGGCCAGCGTCTATTATACGGTCCTGTAAGGTCAAGTaGTATATTCGGTCAAGTGTTAGCAATCGCATGTTA +
Preference number: 6 (lower is better)
Translates to: GPASIIRSCKVK*YIRSSVSNRML
Trigger: TAACATGCGATTGCTAACACTTGACCGAATATATCACTTGACCTTACAGGACCGTATAATAGACGCTGGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515695.1
ENST00000677895.1
CDS CCA 72 bp GACCACACCAAATCACCAACGTTGTATTTCAACAGGTaGTCTTTGTCTCTTCCAGTGTTTGGACAAGACTCT +
Preference number: 6 (lower is better)
Translates to: DHTKSPTLYFNR*SLSLPVFGQDS
Trigger: AGAGTCTTGTCCAAACACTGGAAGAGACAAAGACCACCTGTTGAAATACAACGTTGGTGATTTGGTGTGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000398261.6
ENST00000420906.6
ENST00000503128.5
ENST00000508355.5
ENST00000508803.6
ENST00000509115.5
ENST00000512700.2
ENST00000514045.5
ENST00000677559.1
ENST00000678714.1
CDS CAA 90 bp TTGGACCACACCAAATCACCAACGTTGTATTTCAACAGGTGGTCTTaGTCTCTTCCAGTGTTTGGACAAGACTCTTTCTTAGCTGGAATC +
Preference number: 6 (lower is better)
Translates to: LDHTKSPTLYFNRWS*SLPVFGQDSFLAGI
Trigger: GATTCCAGCTAAGAAAGAGTCTTGTCCAAACACTGGAAGAGACAAAGACCACCTGTTGAAATACAACGTTGGTGATTTGGTGTGGTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000312087.10
ENST00000353275.9
ENST00000382891.9
ENST00000382892.6
ENST00000382895.7
ENST00000398261.6
ENST00000420906.6
ENST00000503128.5
ENST00000508355.5
ENST00000508803.6
ENST00000509115.5
ENST00000512700.2
ENST00000514045.5
ENST00000677559.1
ENST00000678714.1
CDS CCA 72 bp GTGCAAGTCGAGTATCTTTTCCCTCAAGGGTCAGAATaGCTGTTCCCTAATACTTATTTATTAGATCTAAAA +
Preference number: 6 (lower is better)
Translates to: VQVEYLFPQGSE*LFPNTYLLDLK
Trigger: TTTTAGATCTAATAAATAAGTATTAGGGAACAGCCATTCTGACCCTTGAGGGAAAAGATACTCGACTTGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508355.5