RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NSD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000165671

Ensembl transcript IDs: ENST00000347982.8, ENST00000354179.8, ENST00000375350.3, ENST00000439151.7, ENST00000503056.5, ENST00000504457.5, ENST00000505395.5, ENST00000508029.5, ENST00000508896.5, ENST00000510954.5, ENST00000511258.5, ENST00000512992.1, ENST00000513736.1, ENST00000515735.1, ENST00000602285.1, ENST00000638627.2, ENST00000644863.1

Found 1670 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAGCAGCAGCGGCGACCCCACAGCCAACAGCCTTGCTGGCCTCAATaGAGCACCCTTGCATCTATAGAGGAGACCTCTGTGAGTGTGCGC +
Preference number: 1 (lower is better)
Translates to: KQQRRPHSQQPCWPQ*STLASIEETSVSVR
Trigger: GCGCACACTCACAGAGGTCTCCTCTATAGATGCAAGGGTGCTGCATTGAGGCCAGCAAGGCTGTTGGCTGTGGGGTCGCCGCTGCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CCA 90 bp CCCAGACAAAAGCAGCAGCGGCGACCCCACAGCCAACAGCCTTGCTaGCCTCAATGCAGCACCCTTGCATCTATAGAGGAGACCTCTGTG +
Preference number: 1 (lower is better)
Translates to: PRQKQQRRPHSQQPC*PQCSTLASIEETSV
Trigger: CACAGAGGTCTCCTCTATAGATGCAAGGGTGCTGCATTGAGGCCAGCAAGGCTGTTGGCTGTGGGGTCGCCGCTGCTGCTTTTGTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR TCA 90 bp TCCAGGCAGCGTGGACGGAGGCTATGGACAAGGTGGCCCCAGCCCTaGGAAACTCAATGGCCACCTTCACCTGGATATAGGATCTCTTCC +
Preference number: 1 (lower is better)
Translates to: SRQRGRRLWTRWPQP*ETQWPPSPGYRISS
Trigger: GGAAGAGATCCTATATCCAGGTGAAGGTGGCCATTGAGTTTCTCAGGGCTGGGGCCACCTTGTCCATAGCCTCCGTCCACGCTGCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CCA 90 bp TTACAACCTGGGAGTCCGGCTCCAGTGAGCAGACAGTGCCGAGCCTaGGAAGGGATCAACAGGGTGTTTCATGCCCTGACCATAGTGTGG +
Preference number: 1 (lower is better)
Translates to: LQPGSPAPVSRQCRA*EGINRVFHALTIVW
Trigger: CCACACTATGGTCAGGGCATGAAACACCCTGTTGATCCCTTCCCAGGCTCGGCACTGTCTGCTCACTGGAGCCGGACTCCCAGGTTGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CCA 90 bp AAGACCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTaGACGGAGGCTATGGACAAGGTGGCCCCAGCCCTGAGAAACTCA +
Preference number: 1 (lower is better)
Translates to: KTQQPELSNNLLQAA*TEAMDKVAPALRNS
Trigger: TGAGTTTCTCAGGGCTGGGGCCACCTTGTCCATAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR TCA 90 bp CTTCCACTGCTGGAAATCTACATTCGCACAGAGCCCGACTGCCCCTaGCCACCTGCTCCTCCAAGGACTGATCTTGAGACTCTGCACAGC +
Preference number: 1 (lower is better)
Translates to: LPLLEIYIRTEPDCP*PPAPPRTDLETLHS
Trigger: GCTGTGCAGAGTCTCAAGATCAGTCCTTGGAGGAGCAGGTGGTCAGGGGCAGTCGGGCTCTGTGCGAATGTAGATTTCCAGCAGTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CCA 90 bp TCCTCCCAAGGGTTCCTAGGTGCCCTCAATGGGGCTCTGTCTGGTTaGGGAAATCGCTTTGAGAGCCCCTATACCTTCCAACCTGACCAG +
Preference number: 1 (lower is better)
Translates to: SSQGFLGALNGALSG*GNRFESPYTFQPDQ
Trigger: CTGGTCAGGTTGGAAGGTATAGGGGCTCTCAAAGCGATTTCCCCAACCAGACAGAGCCCCATTGAGGGCACCTAGGAACCCTTGGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR GCA 90 bp AATGGCCACCTTCACCTGGATATAGGATCTCTTCCACCTCTGGATTaGACTGGGCCACTCCAGGGTTGGGTGCAGGCTTCACTGAGGATC +
Preference number: 1 (lower is better)
Translates to: NGHLHLDIGSLPPLD*TGPLQGWVQASLRI
Trigger: GATCCTCAGTGAAGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATCCAGGTGAAGGTGGCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CCA 90 bp CCACCTTCACCTGGATATAGGATCTCTTCCACCTCTGGATTGCACTaGGCCACTCCAGGGTTGGGTGCAGGCTTCACTGAGGATCTTCCT +
Preference number: 1 (lower is better)
Translates to: PPSPGYRISSTSGLH*ATPGLGAGFTEDLP
Trigger: AGGAAGATCCTCAGTGAAGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATCCAGGTGAAGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR TCA 90 bp CTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTaGCTAGCACCCGGCCTAGAACACGTGAATGCTCAGGAAATCGCC +
Preference number: 1 (lower is better)
Translates to: LGIQAHRDEACISHQ*LAPGLEHVNAQEIA
Trigger: GGCGATTTCCTGAGCATTCACGTGTTCTAGGCCGGGTGCTAGTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR TCA 90 bp CTCAGCAAGAAAGGGGCTGGAGGCAGCTCCTTCTCTGCCATGATCTaGGAGAGGTTAGGACACTGGGCTCCTCTAACCTGGCTGATAAAC +
Preference number: 1 (lower is better)
Translates to: LSKKGAGGSSFSAMI*ERLGHWAPLTWLIN
Trigger: GTTTATCAGCCAGGTTAGAGGAGCCCAGTGTCCTAACCTCTCTCAGATCATGGCAGAGAAGGAGCTGCCTCCAGCCCCTTTCTTGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR TCA 90 bp ACACCACCTCTTGCCAGTCTTCAGGGAAGGGTTCTGGCTTGCCTTTaGGCTAAGTCAGCAGGCAGGTGCTCTCAATACAGAGCACAGCAA +
Preference number: 1 (lower is better)
Translates to: TPPLASLQGRVLACL*AKSAGRCSQYRAQQ
Trigger: TTGCTGTGCTCTGTATTGAGAGCACCTGCCTGCTGACTTAGCTCAAAGGCAAGCCAGAACCCTTCCCTGAAGACTGGCAAGAGGTGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR GCA 90 bp GCACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTaGCACAAAGGACATTTCAAAATGAGTCTAAAGCCCCAGGGCCCC +
Preference number: 1 (lower is better)
Translates to: AHRSQETLPQHNHFW*HKGHFKMSLKPQGP
Trigger: GGGGCCCTGGGGCTTTAGACTCATTTTGAAATGTCCTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CCA 90 bp CGTTGCTCTAAACACCACCTCTTGCCAGTCTTCAGGGAAGGGTTCTaGCTTGCCTTTGAGCTAAGTCAGCAGGCAGGTGCTCTCAATACA +
Preference number: 1 (lower is better)
Translates to: RCSKHHLLPVFREGF*LAFELSQQAGALNT
Trigger: TGTATTGAGAGCACCTGCCTGCTGACTTAGCTCAAAGGCAAGCCAGAACCCTTCCCTGAAGACTGGCAAGAGGTGGTGTTTAGAGCAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR TCA 90 bp CTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTTCACTaGGGATCTTCCTTCTCCCCACTTTTAACAAAGCCTCAAACTTTT +
Preference number: 1 (lower is better)
Translates to: LWIALGHSRVGCRLH*GSSFSPLLTKPQTF
Trigger: AAAAGTTTGAGGCTTTGTTAAAAGTGGGGAGAAGGAAGATCCTCAGTGAAGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CCA 90 bp CATGCACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTaGTGCCACAAAGGACATTTCAAAATGAGTCTAAAGCCCCAGGGC +
Preference number: 1 (lower is better)
Translates to: HAHRSQETLPQHNHF*CHKGHFKMSLKPQG
Trigger: GCCCTGGGGCTTTAGACTCATTTTGAAATGTCCTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CCA 90 bp GGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATaGAACTGCTCAAATGAAACTCAGCAAGAAAGGGGCTGGAGGCAG +
Preference number: 1 (lower is better)
Translates to: GSHSNYQAVTWNVYT*NCSNETQQERGWRQ
Trigger: CTGCCTCCAGCCCCTTTCTTGCTGAGTTTCATTTGAGCAGTTCCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CCA 90 bp TACACACACACAGGTAGCACCCACCTCGATGAGACCGCCTTGCTCTaGCCTGCCCCAACCCTGGAAGTTGAAAACATAGAACCATTTATT +
Preference number: 1 (lower is better)
Translates to: YTHTGSTHLDETALL*PAPTLEVENIEPFI
Trigger: AATAAATGGTTCTATGTTTTCAACTTCCAGGGTTGGGGCAGGCCAGAGCAAGGCGGTCTCATCGAGGTGGGTGCTACCTGTGTGTGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CCA 90 bp GTCTACACATGGAACTGCTCAAATGAAACTCAGCAAGAAAGGGGCTaGAGGCAGCTCCTTCTCTGCCATGATCTGAGAGAGGTTAGGACA +
Preference number: 1 (lower is better)
Translates to: VYTWNCSNETQQERG*RQLLLCHDLREVRT
Trigger: TGTCCTAACCTCTCTCAGATCATGGCAGAGAAGGAGCTGCCTCCAGCCCCTTTCTTGCTGAGTTTCATTTGAGCAGTTCCATGTGTAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR TCA 90 bp TCTGCTTCTACTCTCTGTGCCCATGTCTTGTCCACGAAACTTTGCTaGACTTCCAGGACCTTACACCTGAAGCCCCACAATAACCTGATG +
Preference number: 1 (lower is better)
Translates to: SASTLCAHVLSTKLC*TSRTLHLKPHNNLM
Trigger: CATCAGGTTATTGTGGGGCTTCAGGTGTAAGGTCCTGGAAGTTCAGCAAAGTTTCGTGGACAAGACATGGGCACAGAGAGTAGAAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR GCA 90 bp CACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGAACTaGTCAAATGAAACTCAGCAAGAAAGGGGCTGGAGGCAGCTCCTT +
Preference number: 1 (lower is better)
Translates to: HSNYQAVTWNVYTWN*SNETQQERGWRQLL
Trigger: AAGGAGCTGCCTCCAGCCCCTTTCTTGCTGAGTTTCATTTGAGCAGTTCCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR GCA 90 bp ATCAGAACAAATCCTGCAGGGCCACCATGGGCGTCTCTTGAATTTTaGCCAGATGAGATCTCCAACTTCATACTTCAGTGGCGTAGACTT +
Preference number: 1 (lower is better)
Translates to: IRTNPAGPPWASLEF*PDEISNFILQWRRL
Trigger: AAGTCTACGCCACTGAAGTATGAAGTTGGAGATCTCATCTGGGCAAAATTCAAGAGACGCCCATGGTGGCCCTGCAGGATTTGTTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
3UTR CCA 90 bp AACAACACGTTTGCCCCAGGAACTTCAAACAAACGTACAGTGCAGTaGTGGTTCAAGAAGTTTTGCGAAGCAGGCGAGACCCTTGAAGAT +
Preference number: 1 (lower is better)
Translates to: NNTFAPGTSNKRTVQ*WFKKFCEAGETLED
Trigger: ATCTTCAAGGGTCTCGCCTGCTTCGCAAAACTTCTTGAACCACCACTGCACTGTACGTTTGTTTGAAGTTCCTGGGGCAAACGTGTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644863.1
3UTR TCA 90 bp AAGCCCCCACTGGCTAATGTCACAAGAGTTCTGAGTGTTGGGATATaGGGAAAGAATAACAGTGGGAAAGTGTTCGGGGCAGATGTGTTT +
Preference number: 1 (lower is better)
Translates to: KPPLANVTRVLSVGI*GKNNSGKVFGADVF
Trigger: AAACACATCTGCCCCGAACACTTTCCCACTGTTATTCTTTCCTCATATCCCAACACTCAGAACTCTTGTGACATTAGCCAGTGGGGGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
3UTR TCA 90 bp ACTTTTCTACATAAAATCTCCTCCCAAACAGGAACCCGGGTTTCTTaGGCTGCCAGTCCCTCAACCCTTGGCAGTGCTTATTTATACCGT +
Preference number: 1 (lower is better)
Translates to: TFLHKISSQTGTRVS*AASPSTLGSAYLYR
Trigger: ACGGTATAAATAAGCACTGCCAAGGGTTGAGGGACTGGCAGCTCAAGAAACCCGGGTTCCTGTTTGGGAGGAGATTTTATGTAGAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CCA 90 bp ATGCTGCTACTGGTGGGCCCAATAGCTCAAATTTCTAGTTTCCAGTaGTTTTCTAGTTCCCATTCAATGGCCCTTGAAGGAAGCCCAGAT +
Preference number: 1 (lower is better)
Translates to: MLLLVGPIAQISSFQ*FSSSHSMALEGSPD
Trigger: ATCTGGGCTTCCTTCAAGGGCCATTGAATGGGAACTAGAAAACCACTGGAAACTAGAAATTTGAGCTATTGGGCCCACCAGTAGCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR GCA 90 bp GACCCTGTGAGGCTATTTGCTATCCTGGAAAGTTCATTAGAGGCCTaGGTATCAGATATATCCCCAGAGATAAAGTTTAGGCCAAGGTTC +
Preference number: 1 (lower is better)
Translates to: DPVRLFAILESSLEA*VSDISPEIKFRPRF
Trigger: GAACCTTGGCCTAAACTTTATCTCTGGGGATATATCTGATACGCAGGCCTCTAATGAACTTTCCAGGATAGCAAATAGCCTCACAGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638627.2
3UTR TCA 90 bp AATCGCTTTGAGAGCCCCTATACCTTCCAACCTGACCAGCGGAATTaGATTCCATACTTGACTCCAGAGTGGACTTTTTATTTCACGATG +
Preference number: 1 (lower is better)
Translates to: NRFESPYTFQPDQRN*IPYLTPEWTFYFTM
Trigger: CATCGTGAAATAAAAAGTCCACTCTGGAGTCAAGTATGGAATTCAATTCCGCTGGTCAGGTTGGAAGGTATAGGGGCTCTCAAAGCGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR TCA 90 bp CCTCACTCCCTCCTGTCCTGTGAGACATCTAGACTGCTGTCAAGTTaGTTACCTACCAAAGCCTACTTTAGAGAAGCTACTTTAGAATCA +
Preference number: 1 (lower is better)
Translates to: PHSLLSCETSRLLSS*LPTKAYFREATLES
Trigger: TGATTCTAAAGTAGCTTCTCTAAAGTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCTAGATGTCTCACAGGACAGGAGGGAGTGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR TCA 90 bp TCTATCGAAAGCATCTGGAATTTCAAGGACACTGTTATCAGACTCTaGGCTGTGTTCTATGGGATCCAGGTCACTGCTTCCATCATCAGA +
Preference number: 1 (lower is better)
Translates to: SIESIWNFKDTVIRL*AVFYGIQVTASIIR
Trigger: TCTGATGATGGAAGCAGTGACCTGGATCCCATAGAACACAGCTCAGAGTCTGATAACAGTGTCCTTGAAATTCCAGATGCTTTCGATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638627.2
3UTR TCA 90 bp ACTGTTCCCTCCGTGGAATTGATGGGAGTAACCTCAATAAGAACTTaGGGAAATTGGGACCAAATACAGAATCCTATTGAGAGCGTGAAA +
Preference number: 1 (lower is better)
Translates to: TVPSVELMGVTSIRT*GNWDQIQNPIESVK
Trigger: TTTCACGCTCTCAATAGGATTCTGTATTTGGTCCCAATTTCCTCAAGTTCTTATTGAGGTTACTCCCATCAATTCCACGGAGGGAACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CCA 90 bp ATGTGCTTCAAATTGTATGTGGCCCTTTTTCACACTAGTCCTTTTTaGATTATCAGAGCTCTTTCTGGCTCGAGATTTAGCGCAAGGCTT +
Preference number: 1 (lower is better)
Translates to: MCFKLYVALFHTSPF*IIRALSGSRFSARL
Trigger: AAGCCTTGCGCTAAATCTCGAGCCAGAAAGAGCTCTGATAATCCAAAAAGGACTAGTGTGAAAAAGGGCCACATACAATTTGAAGCACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
3UTR TCA 90 bp CATTTGTGCAGTCTTCAAATGGCATATCTTCTTCACTGTCCAACTTaGTTGAACCAGGAATACATTTTCGGTTCTTTGACCCCTTGGGAA +
Preference number: 1 (lower is better)
Translates to: HLCSLQMAYLLHCPT*LNQEYIFGSLTPWE
Trigger: TTCCCAAGGGGTCAAAGAACCGAAAATGTATTCCTGGTTCAATCAAGTTGGACAGTGAAGAAGATATGCCATTTGAAGACTGCACAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
3UTR CCA 90 bp CTTCAGTGGCGTAGACTTTTTCTTAGGTTGACATCAGGTTCAAAATaGGTCATAAAGCAGTGGAGACAATTCACAACATCAACAACACGT +
Preference number: 1 (lower is better)
Translates to: LQWRRLFLRLTSGSK*VIKQWRQFTTSTTR
Trigger: ACGTGTTGTTGATGTTGTGAATTGTCTCCACTGCTTTATGACCCATTTTGAACCTGATGTCAACCTAAGAAAAAGTCTACGCCACTGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644863.1
3UTR-3UTR CCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTAGATTTCCCAGCCCTTaGGCCCCAGCTCAGGGCAGC +
Preference number: 2 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQARFPSP*APAQGS
Trigger: GCTGCCCTGAGCTGGGGCCCAAGGGCTGGGAAATCT...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CAA 90 bp ACAGCCCAGACAAAAGCAGCAGCGGCGACCCCACAGCCAACAGCCTaGCTGGCCTCAATGCAGCACCCTTGCATCTATAGAGGAGACCTC +
Preference number: 2 (lower is better)
Translates to: TAQTKAAAATPQPTA*LASMQHPCIYRGDL
Trigger: GAGGTCTCCTCTATAGATGCAAGGGTGCTGCATTGAGGCCAGCAAGGCTGTTGGCTGTGGGGTCGCCGCTGCTGCTTTTGTCTGGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR GCA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTACCAAGGGTTCCTAGGTaGCCTCAATGGGGCTCTGTC +
Preference number: 2 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLPRVPR*PQWGSV
Trigger: GACAGAGCCCCATTGAGGGCACCTAGGAACCCTTGG...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR GCA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTACCGGGTTTCTTGAGCTaGCAGTCCCTCAACCCTTGG +
Preference number: 2 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLPGFLS*QSLNPW
Trigger: CCAAGGGTTGAGGGACTGGCAGCTCAAGAAACCCGG...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR TCA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGGAGCCCGACTGCCCCTaGCCACCTGCTCCTCCAAGG +
Preference number: 2 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWEPDCP*PPAPPR
Trigger: CCTTGGAGGAGCAGGTGGTCAGGGGCAGTCGGGCTC...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR TCA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTACACTGCCCGAGGCTCTaGAATCTGAAAGCACCTGAG +
Preference number: 2 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLHCPRL*NLKAPE
Trigger: CTCAGGTGCTTTCAGATTTCAGAGCCTCGGGCAGTG...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CCA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTAAGCCAACAGCCTTGCTaGCCTCAATGCAGCACCCTT +
Preference number: 2 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLSQQPC*PQCSTL
Trigger: AAGGGTGCTGCATTGAGGCCAGCAAGGCTGTTGGCT...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR TCA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTACTGGTCAAAGGTTCCTaGAAGCCTTGGAATCCAGGC +
Preference number: 2 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLLVKGS*KPWNPG
Trigger: GCCTGGATTCCAAGGCTTTCAGGAACCTTTGACCAG...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR TCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTAGTGAAAGGAGACTCTaGCAGTGCAGTGCAGATACC +
Preference number: 2 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQASERRL*QCSADT
Trigger: GGTATCTGCACTGCACTGTCAGAGTCTCCTTTCACT...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTGTCTGTCTCCTTGGTTaGGGCCCACTGGATTTTCAT +
Preference number: 2 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQAVCLLG*GPLDFH
Trigger: ATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGAC...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR TCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTCCTGACCAGCGGAATTaGATTCCATACTTGACTCCA +
Preference number: 2 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQAPDQRN*IPYLTP
Trigger: TGGAGTCAAGTATGGAATTCAATTCCGCTGGTCAGG...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR TCA 90 bp GATATAGGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCCTCGTCCCTCTGCCTaGGTTCAAGTGTCTCAACCT +
Preference number: 2 (lower is better)
Translates to: DIGSLPPLDCTGPLQGWVPRPSA*VQVSQP
Trigger: AGGTTGAGACACTTGAACTCAGGCAGAGGGACGAGG...CACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTGAAGCCTCCAATGAATaGCGGAGAATGGAAAGAACC +
Preference number: 2 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQAEASNE*RRMERT
Trigger: GGTTCTTTCCATTCTCCGCCATTCATTGGAGGCTTC...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTCAGTCCCTCAACCCTTaGCAGTGCTTATTTATACCG +
Preference number: 2 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQAQSLNP*QCLFIP
Trigger: CGGTATAAATAAGCACTGCCAAGGGTTGAGGGACTG...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR TCA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCTGTATCTCTCATCAGTaGCTAGCACCCGGCCTAGAA +
Preference number: 2 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLCISHQ*LAPGLE
Trigger: TTCTAGGCCGGGTGCTAGTCACTGATGAGAGATACA...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR GCA 90 bp CACCCAGGCTCTCTCAGAAGGATCTCCAAAAGCCTCCACGTAGTACTGCCGATAGATCAGAACAAATCCTaGAGGGCCACCATGGGCGTC +
Preference number: 2 (lower is better)
Translates to: HPGSLRRISKSLHVVLPIDQNKS*RATMGV
Trigger: GACGCCCATGGTGGCCCTGCAGGATTTGTTCTGATC...TATCGGCAGTACTACGTGGAGGCTTTTGGAGATCCTTCTGAGAGAGCCTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
3UTR-3UTR CCA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCCCCAAATGGTACCCTaGGGGCAGCTTGTTTGTTCA +
Preference number: 2 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFPQMVP*GQLVCS
Trigger: TGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGG...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CCA 90 bp GATATAGGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGGTCTGTCTGTCTCCTTaGTTGGGGCCCACTGGATTT +
Preference number: 2 (lower is better)
Translates to: DIGSLPPLDCTGPLQGWVVCLSP*LGPTGF
Trigger: AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGAC...CACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR TCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTAAATCGCCACTGATTTaGAAGAACACCATTTCCTCC +
Preference number: 2 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQAKSPLI*KNTISS
Trigger: GGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTT...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CAA 90 bp GCACCCGGCCTAGAACACGTGAATGCTCAGGAAATCGCCACTGATTaGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTGCCCTCAA +
Preference number: 2 (lower is better)
Translates to: APGLEHVNAQEIATD*KEHHFLPRVPRCPQ
Trigger: TTGAGGGCACCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTGAGCATTCACGTGTTCTAGGCCGGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR TCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTTCAGGAAATCGCCACTaGTTTGAAAGAACACCATTT +
Preference number: 2 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQASGNRH*FERTPF
Trigger: AAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTGA...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR GCA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTACACAACCACTTCTGGTaGCACAAAGGACATTTCAAA +
Preference number: 2 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLHNHFW*HKGHFK
Trigger: TTTGAAATGTCCTTTGTGGCACCAGAAGTGGTTGTG...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CCA 90 bp CCTGGTCAAAGGTTCCTGAAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTACCATGTGGAAAAGTTaGGGGAAAGAGACCCAAGTC +
Preference number: 2 (lower is better)
Translates to: PGQRFLKALESRLTGMRPTMWKS*GKETQV
Trigger: GACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT...AGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTTCAGGAACCTTTGACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTCTTTCTAGCTACCCATaGAGAATTTCAACTTTTGCC +
Preference number: 2 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQALSSYP*RISTFA
Trigger: GGCAAAAGTTGAAATTCTCCATGGGTAGCTAGAAAG...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR TCA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTCTGAGTGTTGGGATATaGGGAAAGAATAACAGTGGG +
Preference number: 2 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFLSVGI*GKNNSG
Trigger: CCCACTGTTATTCTTTCCTCATATCCCAACACTCAG...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CCA 90 bp GATATAGGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAACACAACCACTTCTaGTGCCACAAAGGACATTTC +
Preference number: 2 (lower is better)
Translates to: DIGSLPPLDCTGPLQGWVQHNHF*CHKGHF
Trigger: GAAATGTCCTTTGTGGCACCAGAAGTGGTTGTGTTG...CACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR TCA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGTGTATCTCTCATCAGTaGCTAGCACCCGGCCTAGAA +
Preference number: 2 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWCISHQ*LAPGLE
Trigger: TTCTAGGCCGGGTGCTAGTCACTGATGAGAGATACA...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR GCA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGACTCTGACAGTGCAGTaGAGATACCTTTTTCTGATC +
Preference number: 2 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWTLTVQ*RYLFLI
Trigger: GATCAGAAAAAGGTATCTGCACTGCACTGTCAGAGT...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR GCA 90 bp AAGGATCTCCAAAAGCCTCCACGTAGTACTGCCGATAGGGCCTCCGGTTGGAAAGCGTCTCTTGAATTTTaGCCAGATGAGATCTCCAAC +
Preference number: 2 (lower is better)
Translates to: KDLQKPPRSTADRASGWKASLEF*PDEISN
Trigger: GTTGGAGATCTCATCTGGGCAAAATTCAAGAGACGC...TTTCCAACCGGAGGCCCTATCGGCAGTACTACGTGGAGGCTTTTGGAGATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
3UTR-3UTR CCA 90 bp CAGGAAATCGCCACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGCCCCAAATGGTACCCTaGGGGCAGCTTGTTTGTTCA +
Preference number: 2 (lower is better)
Translates to: QEIATDLKEHHFLPRVPRPQMVP*GQLVCS
Trigger: TGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGG...CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CCA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGGGAGGGGTAGACAAGTaGGAGGAAACTAGCCAAACA +
Preference number: 2 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWGGVDK*EETSQT
Trigger: TGTTTGGCTAGTTTCCTCCCACTTGTCTACCCCTCC...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CCA 90 bp CCTTGGGAACATCATACTGTTCTGCAAGTCCAACACTGGCTTCCCATTTACTCACCTGCAGGGCCACCATaGGCGTCTCTTGAATTTTGC +
Preference number: 2 (lower is better)
Translates to: PWEHHTVLQVQHWLPIYSPAGPP*ASLEFC
Trigger: GCAAAATTCAAGAGACGCCCATGGTGGCCCTGCAGG...TGAGTAAATGGGAAGCCAGTGTTGGACTTGCAGAACAGTATGATGTTCCCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
3UTR-3UTR TCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGCTGAGTGTTGGGATATaGGGAAAGAATAACAGTGGG +
Preference number: 2 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGLSVGI*GKNNSG
Trigger: CCCACTGTTATTCTTTCCTCATATCCCAACACTCAG...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR TCA 90 bp GATATAGGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGAATACAGAATCCTATTaGGAGCGTGAAAGCCATAAC +
Preference number: 2 (lower is better)
Translates to: DIGSLPPLDCTGPLQGWVNTESY*ERESHN
Trigger: GTTATGGCTTTCACGCTCTCAATAGGATTCTGTATT...CACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR TCA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTACTGGCCATAGCCAATaGCAGGCTCCCACAGCAACT +
Preference number: 2 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPTGHSQ*QAPTAT
Trigger: AGTTGCTGTGGGAGCCTGTCATTGGCTATGGCCAGT...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAACCATAAGCCCCCACTaGCTAATGTCACAAGAGTTC +
Preference number: 2 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSTISPH*LMSQEF
Trigger: GAACTCTTGTGACATTAGCCAGTGGGGGCTTATGGT...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CCA 90 bp GATATAGGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGGAAATAGGGATGGGGTaGATTCATGTACAAAGAGAA +
Preference number: 2 (lower is better)
Translates to: DIGSLPPLDCTGPLQGWVEIGMG*IHVQRE
Trigger: TTCTCTTTGTACATGAATCCACCCCATCCCTATTTC...CACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CCA 90 bp AGATGTATTGGCTTTCTAGCTACCCATGGAGAATTTCAACTTTTGCCTTGTCCCTGGCAGTCTGTGAGCTaGGTGAATGGTAGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: RCIGFLATHGEFQLLPCPWQSVS*VNGRAG
Trigger: CCCTGCCCTACCATTCACCCAGCTCACAGACTGCCA...GGGACAAGGCAAAAGTTGAAATTCTCCATGGGTAGCTAGAAAGCCAATACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CCA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGGGCCTCCTGGGGAGCTaGCTCCAAGGCAAACACTCT +
Preference number: 2 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKGLLGS*LQGKHS
Trigger: AGAGTGTTTGCCTTGGAGCCAGCTCCCCAGGAGGCC...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CAA 90 bp CCCAAACAGGAACCCGGGTTTCTTGAGCTGCCAGTCCCTCAACCCTaGGCAGTGCTTATTTATACCGTGAAATTAGCACCATCATTACAT +
Preference number: 2 (lower is better)
Translates to: PKQEPGFLELPVPQP*AVLIYTVKLAPSLH
Trigger: ATGTAATGATGGTGCTAATTTCACGGTATAAATAAGCACTGCCAAGGGTTGAGGGACTGGCAGCTCAAGAAACCCGGGTTCCTGTTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CAA 90 bp CACACACCAGGCTTCGTTGGGGTTTATTCTTCTCTCGAGAACACTTaGAGATCAAAGCACCCTCAGGCAAGCCCAATAAAGAGTCACCAT +
Preference number: 2 (lower is better)
Translates to: HTPGFVGVYSSLENT*RSKHPQASPIKSHH
Trigger: ATGGTGACTCTTTATTGGGCTTGCCTGAGGGTGCTTTGATCTCAAAGTGTTCTCGAGAGAAGAATAAACCCCAACGAAGCCTGGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638627.2
3UTR-3UTR TCA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGCTGAGTGTTGGGATATaGGGAAAGAATAACAGTGGG +
Preference number: 2 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWLSVGI*GKNNSG
Trigger: CCCACTGTTATTCTTTCCTCATATCCCAACACTCAG...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR TCA 90 bp AGATGTATTGGCTTTCTAGCTACCCATGGAGAATTTCAACTTTTGCCTTGTCCCGTTCTGGCTTGCCTTTaGGCTAAGTCAGCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: RCIGFLATHGEFQLLPCPVLACL*AKSAGR
Trigger: CCTGCCTGCTGACTTAGCTCAAAGGCAAGCCAGAAC...GGGACAAGGCAAAAGTTGAAATTCTCCATGGGTAGCTAGAAAGCCAATACATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR TCA 90 bp GATATAGGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGACCTCAATAAGAACTTaGGGAAATTGGGACCAAATA +
Preference number: 2 (lower is better)
Translates to: DIGSLPPLDCTGPLQGWVTSIRT*GNWDQI
Trigger: TATTTGGTCCCAATTTCCTCAAGTTCTTATTGAGGT...CACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR GCA 90 bp CTGTTATCAGACTCTGAGCTGTGTTCTATGGGATCCAGGTCACTGCTTCCATCATTCAAACATGACGATTaGTTTTCCAGCCACCCAGGC +
Preference number: 2 (lower is better)
Translates to: LLSDSELCSMGSRSLLPSFKHDD*FSSHPG
Trigger: GCCTGGGTGGCTGGAAAAGCAATCGTCATGTTTGAA...TGATGGAAGCAGTGACCTGGATCCCATAGAACACAGCTCAGAGTCTGATAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638627.2
3UTR CAA 90 bp TTCGCTTTTCCTCATCACCTGCTCCAATATAGCAGAGCTTCACTTTaGAACCACACACCAGGCTTCGTTGGGGTTTATTCTTCTCTCGAG +
Preference number: 2 (lower is better)
Translates to: FAFPHHLLQYSRASL*NHTPGFVGVYSSLE
Trigger: CTCGAGAGAAGAATAAACCCCAACGAAGCCTGGTGTGTGGTTCAAAAGTGAAGCTCTGCTATATTGGAGCAGGTGATGAGGAAAAGCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638627.2
3UTR-3UTR TCA 90 bp AGATGTATTGGCTTTCTAGCTACCCATGGAGAATTTCAACTTTTGCCTTGTCCCCCATTCAATGGCCCTTaGAGGAAGCCCAGATGTCCA +
Preference number: 2 (lower is better)
Translates to: RCIGFLATHGEFQLLPCPPFNGP*RKPRCP
Trigger: TGGACATCTGGGCTTCCTTCAAGGGCCATTGAATGG...GGGACAAGGCAAAAGTTGAAATTCTCCATGGGTAGCTAGAAAGCCAATACATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR TCA 90 bp TCCCCCTTCTTGGGCATAAATCCAGGGTCTAAATCATTGGATTCAAGAAGTTTCAAGGCGTTTCTTCTCTaGCCGCACAGCTGTAGTTGC +
Preference number: 2 (lower is better)
Translates to: SPFLGINPGSKSLDSRSFKAFLL*PHSCSC
Trigger: GCAACTACAGCTGTGCGGTCAGAGAAGAAACGCCTT...GAAACTTCTTGAATCCAATGATTTAGACCCTGGATTTATGCCCAAGAAGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375350.3
3UTR-3UTR GCA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGACTCTGACAGTGCAGTaGAGATACCTTTTTCTGATC +
Preference number: 2 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWTLTVQ*RYLFLI
Trigger: GATCAGAAAAAGGTATCTGCACTGCACTGTCAGAGT...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR GCA 90 bp CCCTGTGAGGCTATTTGCTATCCTGGAAAGTTCATTAGAGGCCTGCGTATCAGAGCGTCTCTTGAATTTTaGCCAGATGAGATCTCCAAC +
Preference number: 2 (lower is better)
Translates to: PCEAICYPGKFIRGLRIRASLEF*PDEISN
Trigger: GTTGGAGATCTCATCTGGGCAAAATTCAAGAGACGC...TCTGATACGCAGGCCTCTAATGAACTTTCCAGGATAGCAAATAGCCTCACAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638627.2
3UTR-3UTR CCA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGGTCTGTCTGTCTCCTTaGTTGGGGCCCACTGGATTT +
Preference number: 2 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVVCLSP*LGPTGF
Trigger: AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGAC...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CCA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGGGGGCTCTGTCTGGTTaGGGAAATCGCTTTGAGAGC +
Preference number: 2 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKGALSG*GNRFES
Trigger: GCTCTCAAAGCGATTTCCCCAACCAGACAGAGCCCC...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CCA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTAAAAGGGCACAGGACTaGCACCAAGCAAACCCTACT +
Preference number: 2 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPKRAQD*HQANPT
Trigger: AGTAGGGTTTGCTTGGTGCCAGTCCTGTGCCCTTTT...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CCA 90 bp TGTATGTGGCCCTTTTTCACACTAGTCCTTTTTGGATTATCAGAGCTCTTTCTGCCTGCAGGGCCACCATaGGCGTCTCTTGAATTTTGC +
Preference number: 2 (lower is better)
Translates to: CMWPFFTLVLFGLSELFLPAGPP*ASLEFC
Trigger: GCAAAATTCAAGAGACGCCCATGGTGGCCCTGCAGG...CAGAAAGAGCTCTGATAATCCAAAAAGGACTAGTGTGAAAAAGGGCCACATACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
3UTR CAA 90 bp TGGGTCATAAAGCAGTGGAGACAATTCACAACATCAACAACACGTTaGCCCCAGGAACTTCAAACAAACGTACAGTGCAGTGGTGGTTCA +
Preference number: 2 (lower is better)
Translates to: WVIKQWRQFTTSTTR*PQELQTNVQCSGGS
Trigger: TGAACCACCACTGCACTGTACGTTTGTTTGAAGTTCCTGGGGCAAACGTGTTGTTGATGTTGTGAATTGTCTCCACTGCTTTATGACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644863.1
3UTR-3UTR GCA 90 bp GCACATACCCAAATACCACCCTGCGTTAAGGACCAGAAGTTTTCTAAGATGAAAAAGTCAGCAGGCAGGTaGTCTCAATACAGAGCACAG +
Preference number: 2 (lower is better)
Translates to: AHTQIPPCVKDQKFSKMKKSAGR*SQYRAQ
Trigger: CTGTGCTCTGTATTGAGAGCACCTGCCTGCTGACTT...TTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR GCA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGAAGTCAGCAGGCAGGTaGTCTCAATACAGAGCACAG +
Preference number: 2 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVKSAGR*SQYRAQ
Trigger: CTGTGCTCTGTATTGAGAGCACCTGCCTGCTGACTT...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR GCA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGGTGAGACATCTAGACTaGTGTCAAGTTGATTACCTA +
Preference number: 2 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWVRHLD*CQVDYL
Trigger: TAGGTAATCAACTTGACAGCAGTCTAGATGTCTCAC...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR GCA 90 bp CGTTGGGGTTTATTCTTCTCTCGAGAACACTTTGAGATCAAAGCACCCTCAGGCAACATCATACTGTTCTaGAAGTCCAACACTGGCTTC +
Preference number: 2 (lower is better)
Translates to: RWGLFFSREHFEIKAPSGNIILF*KSNTGF
Trigger: GAAGCCAGTGTTGGACTTGCAGAACAGTATGATGTT...GCCTGAGGGTGCTTTGATCTCAAAGTGTTCTCGAGAGAAGAATAAACCCCAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638627.2
3UTR-3UTR CCA 90 bp TGTCCTGTGAGACATCTAGACTGCTGTCAAGTTGATTACCTACCAAAGCCTACTTTCAGGGAAGGGTTCTaGCTTGCCTTTGAGCTAAGT +
Preference number: 2 (lower is better)
Translates to: CPVRHLDCCQVDYLPKPTFREGF*LAFELS
Trigger: ACTTAGCTCAAAGGCAAGCCAGAACCCTTCCCTGAA...AGTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCTAGATGTCTCACAGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CCA 90 bp TTAGAAAGGCCAAGGTCCCCCTTCTTGGGCATAAATCCAGGGTCTAAATCATTGCAAAAGCCACTTGCTTaGCTTCCTAAGGCGTTTCTT +
Preference number: 2 (lower is better)
Translates to: LERPRSPFLGINPGSKSLQKPLA*LPKAFL
Trigger: AAGAAACGCCTTAGGAAGCCAAGCAAGTGGCTTTTG...CAATGATTTAGACCCTGGATTTATGCCCAAGAAGGGGGACCTTGGCCTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375350.3
3UTR-3UTR CCA 90 bp TTCAAACATGACGATTGCTTTTCCAGCCACCCAGGCTCTCTCAGAAGGATCTCCGATAGGGCCTCCGGTTaGAAACTTTCATTTTTGAAT +
Preference number: 2 (lower is better)
Translates to: FKHDDCFSSHPGSLRRISDRASG*KLSFLN
Trigger: ATTCAAAAATGAAAGTTTCCAACCGGAGGCCCTATC...GGAGATCCTTCTGAGAGAGCCTGGGTGGCTGGAAAAGCAATCGTCATGTTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
3UTR-3UTR CCA 90 bp CCCTTGGGAACATCATACTGTTCTGCAAGTCCAACACTGGCTTCCCATTTACTCCTGCAAGTCCAACACTaGCTTCCCATTTACTCAAAA +
Preference number: 2 (lower is better)
Translates to: PLGTSYCSASPTLASHLLLQVQH*LPIYSK
Trigger: TTTTGAGTAAATGGGAAGCCAGTGTTGGACTTGCAG...GAGTAAATGGGAAGCCAGTGTTGGACTTGCAGAACAGTATGATGTTCCCAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
3UTR-3UTR TCA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGATTGAATTCCATACTTaGCTCCAGAGTGGACTTTTT +
Preference number: 2 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWIEFHT*LQSGLF
Trigger: AAAAAGTCCACTCTGGAGTCAAGTATGGAATTCAAT...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR TCA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGCTATACCTTCCAACCTaGCCAGCGGAATTGAATTCC +
Preference number: 2 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVLYLPT*PAELNS
Trigger: GGAATTCAATTCCGCTGGTCAGGTTGGAAGGTATAG...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR TCA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGGAACGAAGCCTCCAATaGATGGCGGAGAATGGAAAG +
Preference number: 2 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKERSLQ*MAENGK
Trigger: CTTTCCATTCTCCGCCATTCATTGGAGGCTTCGTTC...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR GCA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGTCAATGCAGCACCCTTaGATCTATAGAGGAGACCTC +
Preference number: 2 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVSMQHP*IYRGDL
Trigger: GAGGTCTCCTCTATAGATGCAAGGGTGCTGCATTGA...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR GCA 90 bp TTAGAAAGGCCAAGGTCCCCCTTCTTGGGCATAAATCCAGGGTCTAAATCATTGTTCATAATTTCCTTGTaGACCTGCTCCTGTACCTTC +
Preference number: 2 (lower is better)
Translates to: LERPRSPFLGINPGSKSLFIISL*TCSCTF
Trigger: GAAGGTACAGGAGCAGGTGCACAAGGAAATTATGAA...CAATGATTTAGACCCTGGATTTATGCCCAAGAAGGGGGACCTTGGCCTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375350.3
3UTR-3UTR GCA 90 bp AATTGTATGTGGCCCTTTTTCACACTAGTCCTTTTTGGATTATCAGAGCTCTTTGATCAGAACAAATCCTaGAGGGCCACCATGGGCGTC +
Preference number: 2 (lower is better)
Translates to: NCMWPFFTLVLFGLSELFDQNKS*RATMGV
Trigger: GACGCCCATGGTGGCCCTGCAGGATTTGTTCTGATC...AAAGAGCTCTGATAATCCAAAAAGGACTAGTGTGAAAAAGGGCCACATACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
3UTR-3UTR CCA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGACCATAAGCCCCCACTaGCTAATGTCACAAGAGTTC +
Preference number: 2 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVTISPH*LMSQEF
Trigger: GAACTCTTGTGACATTAGCCAGTGGGGGCTTATGGT...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CAA 90 bp AAATTTCTAGTTTCCAGTGGTTTTCTAGTTCCCATTCAATGGCCCTaGAAGGAAGCCCAGATGTCCATCCATTCAGATGAAGAACTGCTC +
Preference number: 2 (lower is better)
Translates to: KFLVSSGFLVPIQWP*KEAQMSIHSDEELL
Trigger: GAGCAGTTCTTCATCTGAATGGATGGACATCTGGGCTTCCTTCAAGGGCCATTGAATGGGAACTAGAAAACCACTGGAAACTAGAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR TCA 90 bp CACAGTGATTTAAGTCATCTCAAACTCAGTAACAGGGTAAAGCAGACATTTAAAGTTCTGGCTTGCCTTTaGGCTAAGTCAGCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: HSDLSHLKLSNRVKQTFKVLACL*AKSAGR
Trigger: CCTGCCTGCTGACTTAGCTCAAAGGCAAGCCAGAAC...TTTAAATGTCTGCTTTACCCTGTTACTGAGTTTGAGATGACTTAAATCACTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR GCA 90 bp CTTGGGAACATCATACTGTTCTGCAAGTCCAACACTGGCTTCCCATTTACTCAAAACATCATACTGTTCTaGAAGTCCAACACTGGCTTC +
Preference number: 2 (lower is better)
Translates to: LGNIILFCKSNTGFPFTQNIILF*KSNTGF
Trigger: GAAGCCAGTGTTGGACTTGCAGAACAGTATGATGTT...TTGAGTAAATGGGAAGCCAGTGTTGGACTTGCAGAACAGTATGATGTTCCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
3UTR-3UTR CCA 90 bp CACAGTGATTTAAGTCATCTCAAACTCAGTAACAGGGTAAAGCAGACATTTAAAAGCCAACAGCCTTGCTaGCCTCAATGCAGCACCCTT +
Preference number: 2 (lower is better)
Translates to: HSDLSHLKLSNRVKQTFKSQQPC*PQCSTL
Trigger: AAGGGTGCTGCATTGAGGCCAGCAAGGCTGTTGGCT...TTTAAATGTCTGCTTTACCCTGTTACTGAGTTTGAGATGACTTAAATCACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR TCA 90 bp TGTCCTGTGAGACATCTAGACTGCTGTCAAGTTGATTACCTACCAAAGCCTACTCTTTTTATTTCACGATaGCCATGTGGAAAAGTTGGG +
Preference number: 2 (lower is better)
Translates to: CPVRHLDCCQVDYLPKPTLFISR*PCGKVG
Trigger: CCCAACTTTTCCACATGGTCATCGTGAAATAAAAAG...AGTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCTAGATGTCTCACAGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR TCA 90 bp CCTTGGGAACATCATACTGTTCTGCAAGTCCAACACTGGCTTCCCATTTACTCAAGAATCAAAAGCCAGTaGTTTCAAACAGCCATTAAG +
Preference number: 2 (lower is better)
Translates to: PWEHHTVLQVQHWLPIYSRIKSQ*FQTAIK
Trigger: CTTAATGGCTGTTTGAAATCACTGGCTTTTGATTCT...TGAGTAAATGGGAAGCCAGTGTTGGACTTGCAGAACAGTATGATGTTCCCAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
3UTR-3UTR GCA 90 bp ACATCATACTGTTCTGCAAGTCCAACACTGGCTTCCCATTTACTCAAAATTTTCTGGTTCAAGAAGTTTTaGGAAGCAGGCGAGACCCTT +
Preference number: 2 (lower is better)
Translates to: TSYCSASPTLASHLLKIFWFKKF*EAGETL
Trigger: AAGGGTCTCGCCTGCTTCGCAAAACTTCTTGAACCA...GAAAATTTTGAGTAAATGGGAAGCCAGTGTTGGACTTGCAGAACAGTATGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644863.1
3UTR CAA 90 bp TCATTTGTGCAGTCTTCAAATGGCATATCTTCTTCACTGTCCAACTaGATTGAACCAGGAATACATTTTCGGTTCTTTGACCCCTTGGGA +
Preference number: 2 (lower is better)
Translates to: SFVQSSNGISSSLSN*IEPGIHFRFFDPLG
Trigger: TCCCAAGGGGTCAAAGAACCGAAAATGTATTCCTGGTTCAATCAAGTTGGACAGTGAAGAAGATATGCCATTTGAAGACTGCACAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
3UTR CAA 90 bp GAGATCTCCAACTTCATACTTCAGTGGCGTAGACTTTTTCTTAGGTaGACATCAGGTTCAAAATGGGTCATAAAGCAGTGGAGACAATTC +
Preference number: 2 (lower is better)
Translates to: EISNFILQWRRLFLR*TSGSKWVIKQWRQF
Trigger: GAATTGTCTCCACTGCTTTATGACCCATTTTGAACCTGATGTCAACCTAAGAAAAAGTCTACGCCACTGAAGTATGAAGTTGGAGATCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644863.1
3UTR-3UTR TCA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGCTTTTTATTTCACGATaGCCATGTGGAAAAGTTGGG +
Preference number: 2 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVLFISR*PCGKVG
Trigger: CCCAACTTTTCCACATGGTCATCGTGAAATAAAAAG...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR TCA 90 bp CACAGTGATTTAAGTCATCTCAAACTCAGTAACAGGGTAAAGCAGACATTTAAATTGGGGAAATCGCTTTaGGAGCCCCTATACCTTCCA +
Preference number: 2 (lower is better)
Translates to: HSDLSHLKLSNRVKQTFKLGKSL*EPLYLP
Trigger: TGGAAGGTATAGGGGCTCTCAAAGCGATTTCCCCAA...TTTAAATGTCTGCTTTACCCTGTTACTGAGTTTGAGATGACTTAAATCACTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CCA 90 bp GTCCTTTTTGGATTATCAGAGCTCTTTCTGGCTCGAGATTTAGCGCAAGGCTTTAACTTCATACTTCAGTaGCGTAGACTTTTTCTTAGG +
Preference number: 2 (lower is better)
Translates to: VLFGLSELFLARDLAQGFNFILQ*RRLFLR
Trigger: CCTAAGAAAAAGTCTACGCCACTGAAGTATGAAGTT...AAAGCCTTGCGCTAAATCTCGAGCCAGAAAGAGCTCTGATAATCCAAAAAGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
3UTR-3UTR TCA 90 bp AGATGTATTGGCTTTCTAGCTACCCATGGAGAATTTCAACTTTTGCCTTGTCCCATTGAATTCCATACTTaGCTCCAGAGTGGACTTTTT +
Preference number: 2 (lower is better)
Translates to: RCIGFLATHGEFQLLPCPIEFHT*LQSGLF
Trigger: AAAAAGTCCACTCTGGAGTCAAGTATGGAATTCAAT...GGGACAAGGCAAAAGTTGAAATTCTCCATGGGTAGCTAGAAAGCCAATACATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR TCA 90 bp GGTCATGTTCTGACTCAGGATCATTTGTGCAGTCTTCAAATGGCATATCTTCTTGACTTTTTCTTAGGTTaGCATCAGGTTCAAAATGGG +
Preference number: 2 (lower is better)
Translates to: GHVLTQDHLCSLQMAYLLDFFLG*HQVQNG
Trigger: CCCATTTTGAACCTGATGTCAACCTAAGAAAAAGTC...AAGAAGATATGCCATTTGAAGACTGCACAAATGATCCTGAGTCAGAACATGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644863.1
3UTR-3UTR GCA 90 bp CCCTTCTTGGGCATAAATCCAGGGTCTAAATCATTGGATTCAAGAAGTTTCTTAATTTCCTTGTGCACCTaGTCCTGTACCTTCTTTTGT +
Preference number: 2 (lower is better)
Translates to: PFLGINPGSKSLDSRSFLISLCT*SCTFFC
Trigger: ACAAAAGAAGGTACAGGAGCAGGTGCACAAGGAAAT...TAAGAAACTTCTTGAATCCAATGATTTAGACCCTGGATTTATGCCCAAGAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375350.3
3UTR-3UTR CCA 90 bp GCACATACCCAAATACCACCCTGCGTTAAGGACCAGAAGTTTTCTAAGATGAAACAATTCACATCCCTTTaGAAAAGGGGTCTTATTACA +
Preference number: 2 (lower is better)
Translates to: AHTQIPPCVKDQKFSKMKQFTSL*KRGLIT
Trigger: TGTAATAAGACCCCTTTTCCAAAGGGATGTGAATTG...TTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CCA 90 bp ATTGAACCAGGAATACATTTTCGGTTCTTTGACCCCTTGGGAACATCATACTGTAACTTCATACTTCAGTaGCGTAGACTTTTTCTTAGG +
Preference number: 2 (lower is better)
Translates to: IEPGIHFRFFDPLGTSYCNFILQ*RRLFLR
Trigger: CCTAAGAAAAAGTCTACGCCACTGAAGTATGAAGTT...ACAGTATGATGTTCCCAAGGGGTCAAAGAACCGAAAATGTATTCCTGGTTCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
3UTR CCA 72 bp CAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTaGACGGAGGCTATGGACAAGGTGGCCCCAGCCCTG +
Preference number: 3 (lower is better)
Translates to: QPELSNNLLQAA*TEAMDKVAPAL
Trigger: CAGGGCTGGGGCCACCTTGTCCATAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CAA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTCCACAGCCAACAGCCTaGCTGGCCTCAATGCAGCAC +
Preference number: 3 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQAPQPTA*LASMQH
Trigger: GTGCTGCATTGAGGCCAGCAAGGCTGTTGGCTGTGG...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR GCA 72 bp CGGCGACCCCACAGCCAACAGCCTTGCTGGCCTCAATaGAGCACCCTTGCATCTATAGAGGAGACCTCTGTG +
Preference number: 3 (lower is better)
Translates to: RRPHSQQPCWPQ*STLASIEETSV
Trigger: CACAGAGGTCTCCTCTATAGATGCAAGGGTGCTGCATTGAGGCCAGCAAGGCTGTTGGCTGTGGGGTCGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CCA 72 bp AAGCAGCAGCGGCGACCCCACAGCCAACAGCCTTGCTaGCCTCAATGCAGCACCCTTGCATCTATAGAGGAG +
Preference number: 3 (lower is better)
Translates to: KQQRRPHSQQPC*PQCSTLASIEE
Trigger: CTCCTCTATAGATGCAAGGGTGCTGCATTGAGGCCAGCAAGGCTGTTGGCTGTGGGGTCGCCGCTGCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CAA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTTGTCTGTCTCCTTGGTaGGGGCCCACTGGATTTTCA +
Preference number: 3 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQACLSPW*GPTGFS
Trigger: TGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACA...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CAA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTTCTAAACACCACCTCTaGCCAGTCTTCAGGGAAGGG +
Preference number: 3 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQASKHHL*PVFREG
Trigger: CCCTTCCCTGAAGACTGGCAAGAGGTGGTGTTTAGA...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR GCA 72 bp CACACACAGGTAGCACCCACCTCGATGAGACCGCCTTaGTCTGGCCTGCCCCAACCCTGGAAGTTGAAAACA +
Preference number: 3 (lower is better)
Translates to: HTQVAPTSMRPP*SGLPQPWKLKT
Trigger: TGTTTTCAACTTCCAGGGTTGGGGCAGGCCAGAGCAAGGCGGTCTCATCGAGGTGGGTGCTACCTGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CAA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCCTCCAAGGACTGATCTaGAGACTCTGCACAGCCCAG +
Preference number: 3 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLLQGLI*RLCTAQ
Trigger: CTGGGCTGTGCAGAGTCTCAAGATCAGTCCTTGGAG...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CAA 90 bp GATATAGGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGAGGAACCCGGGTTTCTaGAGCTGCCAGTCCCTCAAC +
Preference number: 3 (lower is better)
Translates to: DIGSLPPLDCTGPLQGWVRNPGF*SCQSLN
Trigger: GTTGAGGGACTGGCAGCTCAAGAAACCCGGGTTCCT...CACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR TCA 72 bp AAAGGGGCTGGAGGCAGCTCCTTCTCTGCCATGATCTaGGAGAGGTTAGGACACTGGGCTCCTCTAACCTGG +
Preference number: 3 (lower is better)
Translates to: KGAGGSSFSAMI*ERLGHWAPLTW
Trigger: CCAGGTTAGAGGAGCCCAGTGTCCTAACCTCTCTCAGATCATGGCAGAGAAGGAGCTGCCTCCAGCCCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CCA 72 bp CCTGGATATAGGATCTCTTCCACCTCTGGATTGCACTaGGCCACTCCAGGGTTGGGTGCAGGCTTCACTGAG +
Preference number: 3 (lower is better)
Translates to: PGYRISSTSGLH*ATPGLGAGFTE
Trigger: CTCAGTGAAGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR TCA 72 bp CAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTaGCTAGCACCCGGCCTAGAACACGTGAATGCTCAG +
Preference number: 3 (lower is better)
Translates to: QAHRDEACISHQ*LAPGLEHVNAQ
Trigger: CTGAGCATTCACGTGTTCTAGGCCGGGTGCTAGTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR TCA 72 bp CTGGAAATCTACATTCGCACAGAGCCCGACTGCCCCTaGCCACCTGCTCCTCCAAGGACTGATCTTGAGACT +
Preference number: 3 (lower is better)
Translates to: LEIYIRTEPDCP*PPAPPRTDLET
Trigger: AGTCTCAAGATCAGTCCTTGGAGGAGCAGGTGGTCAGGGGCAGTCGGGCTCTGTGCGAATGTAGATTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR GCA 72 bp GATAATGGCCAGGAGACGTTAGGGCCGGGGATGGCCTaGTGGCTAAGTTGGCAAAGCAGAGAGGTAAACATG +
Preference number: 3 (lower is better)
Translates to: DNGQETLGPGMA*WLSWQSREVNM
Trigger: CATGTTTACCTCTCTGCTTTGCCAACTTAGCCAGCAGGCCATCCCCGGCCCTAACGTCTCCTGGCCATTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR GCA 72 bp CTTCACCTGGATATAGGATCTCTTCCACCTCTGGATTaGACTGGGCCACTCCAGGGTTGGGTGCAGGCTTCA +
Preference number: 3 (lower is better)
Translates to: LHLDIGSLPPLD*TGPLQGWVQAS
Trigger: TGAAGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATCCAGGTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CCA 72 bp GGGTTCCTAGGTGCCCTCAATGGGGCTCTGTCTGGTTaGGGAAATCGCTTTGAGAGCCCCTATACCTTCCAA +
Preference number: 3 (lower is better)
Translates to: GFLGALNGALSG*GNRFESPYTFQ
Trigger: TTGGAAGGTATAGGGGCTCTCAAAGCGATTTCCCCAACCAGACAGAGCCCCATTGAGGGCACCTAGGAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CCA 72 bp AATGGCCAGGAGACGTTAGGGCCGGGGATGGCCTGCTaGCTAAGTTGGCAAAGCAGAGAGGTAAACATGTTG +
Preference number: 3 (lower is better)
Translates to: NGQETLGPGMAC*LSWQSREVNML
Trigger: CAACATGTTTACCTCTCTGCTTTGCCAACTTAGCCAGCAGGCCATCCCCGGCCCTAACGTCTCCTGGCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CCA 72 bp ACAGGTAGCACCCACCTCGATGAGACCGCCTTGCTCTaGCCTGCCCCAACCCTGGAAGTTGAAAACATAGAA +
Preference number: 3 (lower is better)
Translates to: TGSTHLDETALL*PAPTLEVENIE
Trigger: TTCTATGTTTTCAACTTCCAGGGTTGGGGCAGGCCAGAGCAAGGCGGTCTCATCGAGGTGGGTGCTACCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CAA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGTGTCTGTCTCCTTGGTaGGGGCCCACTGGATTTTCA +
Preference number: 3 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWCLSPW*GPTGFS
Trigger: TGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACA...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CAA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGGTTGGGGAAATCGCTTaGAGAGCCCCTATACCTTCC +
Preference number: 3 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWVGEIA*RAPIPS
Trigger: GGAAGGTATAGGGGCTCTCAAAGCGATTTCCCCAAC...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CAA 90 bp GATATAGGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGGTTGGGGAAATCGCTTaGAGAGCCCCTATACCTTCC +
Preference number: 3 (lower is better)
Translates to: DIGSLPPLDCTGPLQGWVVGEIA*RAPIPS
Trigger: GGAAGGTATAGGGGCTCTCAAAGCGATTTCCCCAAC...CACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR GCA 72 bp GGAATTCACAGAGGAGATTCCGAGGTCTCAGTGAAATaGAGGGATAGGCCCCTAAACTCAGGACAGCCCTGC +
Preference number: 3 (lower is better)
Translates to: GIHRGDSEVSVK*RDRPLNSGQPC
Trigger: GCAGGGCTGTCCTGAGTTTAGGGGCCTATCCCTGCATTTCACTGAGACCTCGGAATCTCCTCTGTGAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CAA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTCCAATTCACATCCCTTaGGAAAAGGGGTCTTATTAC +
Preference number: 3 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQAPIHIP*EKGSYY
Trigger: GTAATAAGACCCCTTTTCCAAAGGGATGTGAATTGG...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR GCA 72 bp TCTCTTAGCCTGGACGTTGCTCTAAACACCACCTCTTaGCAGTCTTCAGGGAAGGGTTCTGGCTTGCCTTTG +
Preference number: 3 (lower is better)
Translates to: SLSLDVALNTTS*QSSGKGSGLPL
Trigger: CAAAGGCAAGCCAGAACCCTTCCCTGAAGACTGGCAAGAGGTGGTGTTTAGAGCAACGTCCAGGCTAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CAA 90 bp ACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTGCCCTCAATGGAGTCTGTCTGTCTCCTaGGTTGGGGCCCACTGGATT +
Preference number: 3 (lower is better)
Translates to: TDLKEHHFLPRVPRCPQWSLSVS*VGAHWI
Trigger: AATCCAGTGGGCCCCAACCAAGGAGACAGACAGACT...CCATTGAGGGCACCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CAA 90 bp TATCAGACTCTGAGCTGTGTTCTATGGGATCCAGGTCACTGCTTCCATCATCAGCTTCCTGGGGCAGTGTaGGACCCTGTGAGGCTATTT +
Preference number: 3 (lower is better)
Translates to: YQTLSCVLWDPGHCFHHQLPGAV*DPVRLF
Trigger: AAATAGCCTCACAGGGTCCAACACTGCCCCAGGAAG...CTGATGATGGAAGCAGTGACCTGGATCCCATAGAACACAGCTCAGAGTCTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638627.2
3UTR TCA 72 bp CATAAAATCTCCTCCCAAACAGGAACCCGGGTTTCTTaGGCTGCCAGTCCCTCAACCCTTGGCAGTGCTTAT +
Preference number: 3 (lower is better)
Translates to: HKISSQTGTRVS*AASPSTLGSAY
Trigger: ATAAGCACTGCCAAGGGTTGAGGGACTGGCAGCTCAAGAAACCCGGGTTCCTGTTTGGGAGGAGATTTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CCA 72 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTaGATTTTCATACATGGTTCACACAACCATAAGCCC +
Preference number: 3 (lower is better)
Translates to: DPSLSVSLVGAH*IFIHGSHNHKP
Trigger: GGGCTTATGGTTGTGTGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
3UTR CCA 72 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTaGGGCCCACTGGATTTTCATACATGGTTCACACAA +
Preference number: 3 (lower is better)
Translates to: GGKRPKSVCLLG*GPLDFHTWFTQ
Trigger: TTGTGTGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
3UTR CCA 72 bp GCCCCAGGAACTTCAAACAAACGTACAGTGCAGTGGTaGTTCAAGAAGTTTTGCGAAGCAGGCGAGACCCTT +
Preference number: 3 (lower is better)
Translates to: APGTSNKRTVQW*FKKFCEAGETL
Trigger: AAGGGTCTCGCCTGCTTCGCAAAACTTCTTGAACCACCACTGCACTGTACGTTTGTTTGAAGTTCCTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644863.1
3UTR-3UTR CAA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTTACCCTGGGGGCAGCTaGTTTGTTCATGTGACATTG +
Preference number: 3 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVYPGGS*FVHVTL
Trigger: CAATGTCACATGAACAAACAAGCTGCCCCCAGGGTA...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CAA 90 bp AGATGTATTGGCTTTCTAGCTACCCATGGAGAATTTCAACTTTTGCCTTGTCCCCCACAGCCAACAGCCTaGCTGGCCTCAATGCAGCAC +
Preference number: 3 (lower is better)
Translates to: RCIGFLATHGEFQLLPCPPQPTA*LASMQH
Trigger: GTGCTGCATTGAGGCCAGCAAGGCTGTTGGCTGTGG...GGGACAAGGCAAAAGTTGAAATTCTCCATGGGTAGCTAGAAAGCCAATACATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR TCA 72 bp ACTCTCTGTGCCCATGTCTTGTCCACGAAACTTTGCTaGACTTCCAGGACCTTACACCTGAAGCCCCACAAT +
Preference number: 3 (lower is better)
Translates to: TLCAHVLSTKLC*TSRTLHLKPHN
Trigger: ATTGTGGGGCTTCAGGTGTAAGGTCCTGGAAGTTCAGCAAAGTTTCGTGGACAAGACATGGGCACAGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR GCA 72 bp AATCTCCTCCCAAACAGGAACCCGGGTTTCTTGAGCTaGCAGTCCCTCAACCCTTGGCAGTGCTTATTTATA +
Preference number: 3 (lower is better)
Translates to: NLLPNRNPGFLS*QSLNPWQCLFI
Trigger: TATAAATAAGCACTGCCAAGGGTTGAGGGACTGGCAGCTCAAGAAACCCGGGTTCCTGTTTGGGAGGAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR GCA 72 bp AATCCTGCAGGGCCACCATGGGCGTCTCTTGAATTTTaGCCAGATGAGATCTCCAACTTCATACTTCAGTGG +
Preference number: 3 (lower is better)
Translates to: NPAGPPWASLEF*PDEISNFILQW
Trigger: CCACTGAAGTATGAAGTTGGAGATCTCATCTGGGCAAAATTCAAGAGACGCCCATGGTGGCCCTGCAGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
3UTR GCA 72 bp ACACGTTTGCCCCAGGAACTTCAAACAAACGTACAGTaGAGTGGTGGTTCAAGAAGTTTTGCGAAGCAGGCG +
Preference number: 3 (lower is better)
Translates to: TRLPQELQTNVQ*SGGSRSFAKQA
Trigger: CGCCTGCTTCGCAAAACTTCTTGAACCACCACTGCACTGTACGTTTGTTTGAAGTTCCTGGGGCAAACGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644863.1
3UTR CCA 72 bp ACATGTTGGTCTAAGGACAAAGGAGGGGTAGACAAGTaGGAGGAAACTAGCCAAACAGCACTTCCTGTTGGC +
Preference number: 3 (lower is better)
Translates to: TCWSKDKGGVDK*EETSQTALPVG
Trigger: GCCAACAGGAAGTGCTGTTTGGCTAGTTTCCTCCCACTTGTCTACCCCTCCTTTGTCCTTAGACCAACATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CCA 72 bp AATCAACGGATCAGAACAAATCCTGCAGGGCCACCATaGGCGTCTCTTGAATTTTGCCCAGATGAGATCTCC +
Preference number: 3 (lower is better)
Translates to: NQRIRTNPAGPP*ASLEFCPDEIS
Trigger: GGAGATCTCATCTGGGCAAAATTCAAGAGACGCCCATGGTGGCCCTGCAGGATTTGTTCTGATCCGTTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
3UTR CCA 72 bp TTTGCCCCAGGAACTTCAAACAAACGTACAGTGCAGTaGTGGTTCAAGAAGTTTTGCGAAGCAGGCGAGACC +
Preference number: 3 (lower is better)
Translates to: FAPGTSNKRTVQ*WFKKFCEAGET
Trigger: GGTCTCGCCTGCTTCGCAAAACTTCTTGAACCACCACTGCACTGTACGTTTGTTTGAAGTTCCTGGGGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644863.1
3UTR-3UTR CAA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTCTCCAAGGACTGATCTaGAGACTCTGCACAGCCCAG +
Preference number: 3 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPLQGLI*RLCTAQ
Trigger: CTGGGCTGTGCAGAGTCTCAAGATCAGTCCTTGGAG...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CAA 90 bp AAACATGACGATTGCTTTTCCAGCCACCCAGGCTCTCTCAGAAGGATCTCCAAACACCATGGGCGTCTCTaGAATTTTGCCCAGATGAGA +
Preference number: 3 (lower is better)
Translates to: KHDDCFSSHPGSLRRISKHHGRL*NFAQMR
Trigger: TCTCATCTGGGCAAAATTCAAGAGACGCCCATGGTG...TTTGGAGATCCTTCTGAGAGAGCCTGGGTGGCTGGAAAAGCAATCGTCATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
3UTR CCA 72 bp CAAGGACACTGTTATCAGACTCTGAGCTGTGTTCTATaGGATCCAGGTCACTGCTTCCATCATCAGAAGTGG +
Preference number: 3 (lower is better)
Translates to: QGHCYQTLSCVL*DPGHCFHHQKW
Trigger: CCACTTCTGATGATGGAAGCAGTGACCTGGATCCCATAGAACACAGCTCAGAGTCTGATAACAGTGTCCTTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638627.2
3UTR-3UTR CAA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACGAAATCGCCACTGATTaGAAAGAACACCATTTCCTC +
Preference number: 3 (lower is better)
Translates to: KALESRLTGMRPVSLISDEIATD*KEHHFL
Trigger: GAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTC...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CAA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGCCAATTCACATCCCTTaGGAAAAGGGGTCTTATTAC +
Preference number: 3 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWPIHIP*EKGSYY
Trigger: GTAATAAGACCCCTTTTCCAAAGGGATGTGAATTGG...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CAA 90 bp TTAGAAAGGCCAAGGTCCCCCTTCTTGGGCATAAATCCAGGGTCTAAATCATTGTATTCCAAAAGCCACTaGCTTGGCTTCCTAAGGCGT +
Preference number: 3 (lower is better)
Translates to: LERPRSPFLGINPGSKSLYSKSH*LGFLRR
Trigger: ACGCCTTAGGAAGCCAAGCAAGTGGCTTTTGGAATA...CAATGATTTAGACCCTGGATTTATGCCCAAGAAGGGGGACCTTGGCCTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375350.3
3UTR-3UTR CAA 90 bp AGTCCTTTTTGGATTATCAGAGCTCTTTCTGGCTCGAGATTTAGCGCAAGGCTTCACCATGGGCGTCTCTaGAATTTTGCCCAGATGAGA +
Preference number: 3 (lower is better)
Translates to: SPFWIIRALSGSRFSARLHHGRL*NFAQMR
Trigger: TCTCATCTGGGCAAAATTCAAGAGACGCCCATGGTG...AAGCCTTGCGCTAAATCTCGAGCCAGAAAGAGCTCTGATAATCCAAAAAGGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
3UTR-3UTR CAA 90 bp TATGGGATCCAGGTCACTGCTTCCATCATCAGAAGTGGTACAGATACTAATGGAACACACCAGGCTTCGTaGGGGTTTATTCTTCTCTCG +
Preference number: 3 (lower is better)
Translates to: YGIQVTASIIRSGTDTNGTHQAS*GFILLS
Trigger: CGAGAGAAGAATAAACCCCAACGAAGCCTGGTGTGT...TCCATTAGTATCTGTACCACTTCTGATGATGGAAGCAGTGACCTGGATCCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638627.2
3UTR TCA 72 bp AGCATCTGGAATTTCAAGGACACTGTTATCAGACTCTaGGCTGTGTTCTATGGGATCCAGGTCACTGCTTCC +
Preference number: 3 (lower is better)
Translates to: SIWNFKDTVIRL*AVFYGIQVTAS
Trigger: GGAAGCAGTGACCTGGATCCCATAGAACACAGCTCAGAGTCTGATAACAGTGTCCTTGAAATTCCAGATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638627.2
3UTR GCA 72 bp TCCCTCACTCCCTCCTGTCCTGTGAGACATCTAGACTaGTGTCAAGTTGATTACCTACCAAAGCCTACTTTA +
Preference number: 3 (lower is better)
Translates to: SLTPSCPVRHLD*CQVDYLPKPTL
Trigger: TAAAGTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCTAGATGTCTCACAGGACAGGAGGGAGTGAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CAA 90 bp AGATGTATTGGCTTTCTAGCTACCCATGGAGAATTTCAACTTTTGCCTTGTCCCTACCCTGGGGGCAGCTaGTTTGTTCATGTGACATTG +
Preference number: 3 (lower is better)
Translates to: RCIGFLATHGEFQLLPCPYPGGS*FVHVTL
Trigger: CAATGTCACATGAACAAACAAGCTGCCCCCAGGGTA...GGGACAAGGCAAAAGTTGAAATTCTCCATGGGTAGCTAGAAAGCCAATACATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR TCA 72 bp GAGAGCCCCTATACCTTCCAACCTGACCAGCGGAATTaGATTCCATACTTGACTCCAGAGTGGACTTTTTAT +
Preference number: 3 (lower is better)
Translates to: ESPYTFQPDQRN*IPYLTPEWTFY
Trigger: ATAAAAAGTCCACTCTGGAGTCAAGTATGGAATTCAATTCCGCTGGTCAGGTTGGAAGGTATAGGGGCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR GCA 72 bp AGCAGTGGAGACAATTCACAACATCAACAACACGTTTaGCCCAGGAACTTCAAACAAACGTACAGTGCAGTG +
Preference number: 3 (lower is better)
Translates to: SSGDNSQHQQHV*PRNFKQTYSAV
Trigger: CACTGCACTGTACGTTTGTTTGAAGTTCCTGGGGCAAACGTGTTGTTGATGTTGTGAATTGTCTCCACTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644863.1
3UTR CCA 72 bp CGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTaGTGCCACAAAGGACATTTCAAAATGAGTCTAAAG +
Preference number: 3 (lower is better)
Translates to: RSQETLPQHNHF*CHKGHFKMSLK
Trigger: CTTTAGACTCATTTTGAAATGTCCTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CCA 72 bp TTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATaGCGGAGAATGGAAAGAACCAAAATAAAACCACAA +
Preference number: 3 (lower is better)
Translates to: FPRQVWNEASNE*RRMERTKIKPQ
Trigger: TTGTGGTTTTATTTTGGTTCTTTCCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CCA 72 bp AGCAACTACCAAGCAGTGACTTGGAATGTCTACACATaGAACTGCTCAAATGAAACTCAGCAAGAAAGGGGC +
Preference number: 3 (lower is better)
Translates to: SNYQAVTWNVYT*NCSNETQQERG
Trigger: GCCCCTTTCTTGCTGAGTTTCATTTGAGCAGTTCCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CCA 72 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTaGAATGTCTACACATGGAACTGCTCAAATGAAACT +
Preference number: 3 (lower is better)
Translates to: MTGSHSNYQAVT*NVYTWNCSNET
Trigger: AGTTTCATTTGAGCAGTTCCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CCA 72 bp CAGAGCTTCACTTTTGAACCACACACCAGGCTTCGTTaGGGTTTATTCTTCTCTCGAGAACACTTTGAGATC +
Preference number: 3 (lower is better)
Translates to: QSFTFEPHTRLR*GLFFSREHFEI
Trigger: GATCTCAAAGTGTTCTCGAGAGAAGAATAAACCCCAACGAAGCCTGGTGTGTGGTTCAAAAGTGAAGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638627.2
3UTR-3UTR CAA 90 bp AGATGTATTGGCTTTCTAGCTACCCATGGAGAATTTCAACTTTTGCCTTGTCCCGTTCCCTCCGTGGAATaGATGGGAGTAACCTCAATA +
Preference number: 3 (lower is better)
Translates to: RCIGFLATHGEFQLLPCPVPSVE*MGVTSI
Trigger: TATTGAGGTTACTCCCATCAATTCCACGGAGGGAAC...GGGACAAGGCAAAAGTTGAAATTCTCCATGGGTAGCTAGAAAGCCAATACATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR TCA 72 bp CTCCTGTCCTGTGAGACATCTAGACTGCTGTCAAGTTaGTTACCTACCAAAGCCTACTTTAGAGAAGCTACT +
Preference number: 3 (lower is better)
Translates to: LLSCETSRLLSS*LPTKAYFREAT
Trigger: AGTAGCTTCTCTAAAGTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCTAGATGTCTCACAGGACAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CCA 72 bp TTGAACCAGGAATACATTTTCGGTTCTTTGACCCCTTaGGAACATCATACTGTTCTGCAAGTCCAACACTGG +
Preference number: 3 (lower is better)
Translates to: LNQEYIFGSLTP*EHHTVLQVQHW
Trigger: CCAGTGTTGGACTTGCAGAACAGTATGATGTTCCCAAGGGGTCAAAGAACCGAAAATGTATTCCTGGTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
3UTR-3UTR CAA 90 bp CCTTGGGAACATCATACTGTTCTGCAAGTCCAACACTGGCTTCCCATTTACTCAAGACTTTTTCTTAGGTaGACACCAAGAAGTTGTCGA +
Preference number: 3 (lower is better)
Translates to: PWEHHTVLQVQHWLPIYSRLFLR*TPRSCR
Trigger: TCGACAACTTCTTGGTGTCAACCTAAGAAAAAGTCT...TGAGTAAATGGGAAGCCAGTGTTGGACTTGCAGAACAGTATGATGTTCCCAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638627.2
3UTR CCA 72 bp CCTTGGGAACATCATACTGTTCTGCAAGTCCAACACTaGCTTCCCATTTACTCAAAATTTTCTGAGGAACCT +
Preference number: 3 (lower is better)
Translates to: PWEHHTVLQVQH*LPIYSKFSEEP
Trigger: AGGTTCCTCAGAAAATTTTGAGTAAATGGGAAGCCAGTGTTGGACTTGCAGAACAGTATGATGTTCCCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
3UTR CCA 72 bp AGGTTGACATCAGGTTCAAAATGGGTCATAAAGCAGTaGAGACAATTCACAACATCAACAACACGTTTGCCC +
Preference number: 3 (lower is better)
Translates to: RLTSGSKWVIKQ*RQFTTSTTRLP
Trigger: GGGCAAACGTGTTGTTGATGTTGTGAATTGTCTCCACTGCTTTATGACCCATTTTGAACCTGATGTCAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644863.1
3UTR-3UTR CAA 90 bp TTTGGATTATCAGAGCTCTTTCTGGCTCGAGATTTAGCGCAAGGCTTTTCCTTCTCTTCACTGTCCAACTaGATTGAACCAGGAATACAT +
Preference number: 3 (lower is better)
Translates to: FGLSELFLARDLAQGFSFSSLSN*IEPGIH
Trigger: ATGTATTCCTGGTTCAATCAAGTTGGACAGTGAAGA...GAAGGAAAAGCCTTGCGCTAAATCTCGAGCCAGAAAGAGCTCTGATAATCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
3UTR GCA 72 bp AGGCTATTTGCTATCCTGGAAAGTTCATTAGAGGCCTaGGTATCAGATATATCCCCAGAGATAAAGTTTAGG +
Preference number: 3 (lower is better)
Translates to: RLFAILESSLEA*VSDISPEIKFR
Trigger: CCTAAACTTTATCTCTGGGGATATATCTGATACGCAGGCCTCTAATGAACTTTCCAGGATAGCAAATAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638627.2
3UTR-3UTR CAA 90 bp CACAGTGATTTAAGTCATCTCAAACTCAGTAACAGGGTAAAGCAGACATTTAAATACCCTGGGGGCAGCTaGTTTGTTCATGTGACATTG +
Preference number: 3 (lower is better)
Translates to: HSDLSHLKLSNRVKQTFKYPGGS*FVHVTL
Trigger: CAATGTCACATGAACAAACAAGCTGCCCCCAGGGTA...TTTAAATGTCTGCTTTACCCTGTTACTGAGTTTGAGATGACTTAAATCACTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR-3UTR CAA 90 bp AAAATTCTCTTTGCTAACATTACCGGCGGTGACCAAACAATGTGTTTGGGCAGATTAGACGCAATAAAATaGAGGCTAAGAGAAGTGAAC +
Preference number: 3 (lower is better)
Translates to: KILFANITGGDQTMCLGRLDAIK*RLREVN
Trigger: GTTCACTTCTCTTAGCCTCAATTTTATTGCGTCTAA...TCTGCCCAAACACATTGTTTGGTCACCGCCGGTAATGTTAGCAAAGAGAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511258.5
3UTR TCA 72 bp TCCGTGGAATTGATGGGAGTAACCTCAATAAGAACTTaGGGAAATTGGGACCAAATACAGAATCCTATTGAG +
Preference number: 3 (lower is better)
Translates to: SVELMGVTSIRT*GNWDQIQNPIE
Trigger: CTCAATAGGATTCTGTATTTGGTCCCAATTTCCTCAAGTTCTTATTGAGGTTACTCCCATCAATTCCACGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR GCA 72 bp GATCTCAATTTCCAAGCACATACCCAAATACCACCCTaGGTTAAGGACCAGAAGTTTTCTAAGATGAAAGAT +
Preference number: 3 (lower is better)
Translates to: DLNFQAHTQIPP*VKDQKFSKMKD
Trigger: ATCTTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGCTTGGAAATTGAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CCA 72 bp AAATTGTATGTGGCCCTTTTTCACACTAGTCCTTTTTaGATTATCAGAGCTCTTTCTGGCTCGAGATTTAGC +
Preference number: 3 (lower is better)
Translates to: KLYVALFHTSPF*IIRALSGSRFS
Trigger: GCTAAATCTCGAGCCAGAAAGAGCTCTGATAATCCAAAAAGGACTAGTGTGAAAAAGGGCCACATACAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
3UTR-3UTR CAA 90 bp TGTATGTGGCCCTTTTTCACACTAGTCCTTTTTGGATTATCAGAGCTCTTTCTGTTTATGTGCTTCAAATaGTATGTGGCCCTTTTTCAC +
Preference number: 3 (lower is better)
Translates to: CMWPFFTLVLFGLSELFLFMCFK*YVALFH
Trigger: GTGAAAAAGGGCCACATACAATTTGAAGCACATAAA...CAGAAAGAGCTCTGATAATCCAAAAAGGACTAGTGTGAAAAAGGGCCACATACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
3UTR CCA 72 bp CGTAGACTTTTTCTTAGGTTGACATCAGGTTCAAAATaGGTCATAAAGCAGTGGAGACAATTCACAACATCA +
Preference number: 3 (lower is better)
Translates to: RRLFLRLTSGSK*VIKQWRQFTTS
Trigger: TGATGTTGTGAATTGTCTCCACTGCTTTATGACCCATTTTGAACCTGATGTCAACCTAAGAAAAAGTCTACG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644863.1
CDS-3UTR TCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTGAGGCGGCTCTGCCATaGGCTGCTGTGTGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQAEAALP*AAVCCP
Trigger: AGGGCAGCACACAGCAGCTCATGGCAGAGCCGCCTC...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTGCTCTGCCAGGTGAGTaGTTGGCCCTGGAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQAALPGE*LALEAA
Trigger: CGCTGCCTCCAGGGCCAAGCACTCACCTGGCAGAGC...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTAGGGCCGGCATCAACCTaGGGGCTTGGGCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLGPAST*GLGLGS
Trigger: AGACCCCAGCCCAAGCCCCCAGGTTGATGCCGGCCC...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354179.8
CDS-3UTR TCA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTAGGAGTCCGGCTCCAGTaGGCAGACAGTGCCGAGCCT +
Preference number: 4 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLGVRLQ*ADSAEP
Trigger: AGGCTCGGCACTGTCTGCTCACTGGAGCCGGACTCC...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTAGCCTCTGGCCCTGTTaGACTGGCCCTAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQASLWPC*TGPRKL
Trigger: GAGCTTCCTAGGGCCAGTGCAACAGGGCCAGAGGCT...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACGCAGCGAGCGCGACCTaGCCCGGCCTATTCCGCCGC +
Preference number: 4 (lower is better)
Translates to: KALESRLTGMRPVSLISDAASAT*PGLFRR
Trigger: GCGGCGGAATAGGCCGGGGCAGGTCGCGCTCGCTGC...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439151.7
CDS-3UTR GCA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTACTCATTACACTGGGGTaGGAGCGGAGCGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLLITLG*ERSGGE
Trigger: CTCCCCACCGCTCCGCTCGCACCCCAGTGTAATGAG...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439151.7
CDS-3UTR CCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGGTGAGTGCTTGGCCCTaGAGGCAGCGGTACTGGGGG +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWVSAWP*RQRYWG
Trigger: CCCCCAGTACCGCTGCCTCCAGGGCCAAGCACTCAC...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTTTGGGATTTGGTCCCTaGCCCAGCGAGGTCTCTGAC +
Preference number: 4 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQALGFGP*PSEVSD
Trigger: GTCAGAGACCTCGCTGGGTCAGGGACCAAATCCCAA...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTAGGCAGCCTGGTTTCTTaGAGGAGACGAGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLGSLVS*RRRAGQ
Trigger: CTGGCCAGCTCGTCTCCTGCAAGAAACCAGGCTGCC...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGGTGAGTGCTTGGCCCTaGAGGCAGCGGTACTGGGGG +
Preference number: 4 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWVSAWP*RQRYWG
Trigger: CCCCCAGTACCGCTGCCTCCAGGGCCAAGCACTCAC...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGTCCTGCCACTGCTGGTaGCCTGTCCAGTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWSCHCW*PVQWPL
Trigger: CAGAGGCCACTGGACAGGCCACCAGCAGTGGCAGGA...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGTCTGTCCAGCCACTATaGGCCAGAGCCCTGCCCGTG +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWSVQPL*ARALPV
Trigger: CACGGGCAGGGCTCTGGCCCATAGTGGCTGGACAGA...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATCAACCTGGGGGCTTaGGCTGGGGTCTTCGAGGCC +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWINLGA*AGVFEA
Trigger: GGCCTCGAAGACCCCAGCCCAAGCCCCCAGGTTGAT...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000354179.8
CDS-3UTR TCA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTGATTGCTCTGCCAGGTaGGTGCTTGGCCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFDCSAR*VLGPGG
Trigger: GCCTCCAGGGCCAAGCACTCACCTGGCAGAGCAATC...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCGAGCCCGACTGCCCCTaGCCACCTGCTCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFEPDCP*PPAPPR
Trigger: CCTTGGAGGAGCAGGTGGTCAGGGGCAGTCGGGCTC...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGAGCCCGACTGCCCCTaGCCACCTGCTCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: PCGKVGGKRPKSVCLLGWEPDCP*PPAPPR
Trigger: CCTTGGAGGAGCAGGTGGTCAGGGGCAGTCGGGCTC...CCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTACTGGCCATAGCCAATaGCAGGCTCCCACAGCAACT +
Preference number: 4 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQATGHSQ*QAPTAT
Trigger: AGTTGCTGTGGGAGCCTGTCATTGGCTATGGCCAGT...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTAGGGTGCAGGCTTCACTaGGGATCTTCCTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLGCRLH*GSSFSP
Trigger: TGGGGAGAAGGAAGATCCTCAGTGAAGCCTGCACCC...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGCCTAGGAGGCGGCTCTaGCATGAGCTGCTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWPRRRL*HELLCA
Trigger: AGCACACAGCAGCTCATGGCAGAGCCGCCTCCTAGG...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTTTGCAGGAGACGAGCTaGCCAGCATCCCCACAACTA +
Preference number: 4 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQALQETS*PASPQL
Trigger: TAGTTGTGGGGATGCTGGCCAGCTCGTCTCCTGCAA...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACGACGTCCCACAGGGCTaGCAAGGCCACTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: KALESRLTGMRPVSLISDDVPQG*QGHSLP
Trigger: GGGGAGGGAGTGGCCTTGCCAGCCCTGTGGGACGTC...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGCTGGAAAAGGCCTCCTaGGGAGCTGGCTCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWLEKAS*GAGSKA
Trigger: TGCCTTGGAGCCAGCTCCCCAGGAGGCCTTTTCCAG...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCGGTAGTTCACAGGTCTaGTCCATCCTGGGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLGSSQV*SILGRH
Trigger: ATGCCGGCCCAGGATGGATCAGACCTGTGAACTACC...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGCCTCCAAGTTCTGACTaGGCCAAGGGGCCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWPPSSD*AKGPSK
Trigger: TTTGGAGGGCCCCTTGGCTCAGTCAGAACTTGGAGG...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTAGTAGAGGGGCTTCCATaGGTGGAAGAGGTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLVEGLP*VEEVER
Trigger: CCTCTCTACCTCTTCCACTCATGGAAGCCCCTCTAC...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGGGCAGCCTGGTTTCTTaGAGGAGACGAGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWGSLVS*RRRAGQ
Trigger: CTGGCCAGCTCGTCTCCTGCAAGAAACCAGGCTGCC...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGCTCTGCCAGGTGAGTaGTTGGCCCTGGAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: PCGKVGGKRPKSVCLLGWALPGE*LALEAA
Trigger: CGCTGCCTCCAGGGCCAAGCACTCACCTGGCAGAGC...CCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTGCTCTGCCAGGTGAGTaGTTGGCCCTGGAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGALPGE*LALEAA
Trigger: CGCTGCCTCCAGGGCCAAGCACTCACCTGGCAGAGC...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGTCTTGGTCCTGCCACTaGTGGTGGCCTGTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWSWSCH*WWPVQW
Trigger: CCACTGGACAGGCCACCAGCAGTGGCAGGACCAAGA...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTAGGGCCCAGGGACTTTaGTCTGTGGTTACCAACTTC +
Preference number: 4 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQARAQGL*SVVTNF
Trigger: GAAGTTGGTAACCACAGAGCAAAGTCCCTGGGCCCT...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTAGACCAGCAAGTCTGTaGCAATGTCTGTGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQARPASL*QCLCAP
Trigger: GGGAGCACACAGACATTGGCACAGACTTGCTGGTCT...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATGCACACGCACCCATaGACACCGCAGCCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWMHTHP*TPQPRD
Trigger: GTCTCTTGGCTGCGGTGTGCATGGGTGCGTGTGCAT...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCGTCAGCTTGCCTCTTTaGCAAGACCTAGGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLVSLPL*QDLGGG
Trigger: GCCGCCTCCTAGGTCTTGGCAAAGAGGCAAGCTGAC...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTATCTCCTTGGGGCTTGTaGCCGTCCTGTGAGGCATTA +
Preference number: 4 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLSPWGL*PSCEAL
Trigger: TAATGCCTCACAGGACGGCCACAAGCCCCAAGGAGA...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGCCTCAACAGTCTCCTTaGGGCTTGTGGCCGTCCTGT +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWPQQSP*GLWPSC
Trigger: ACAGGACGGCCACAAGCCCCAAGGAGACTGTTGAGG...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCGGAACAGCTCGAGGATaGCAGATCTCAGCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLGTARG*QISAGH
Trigger: GTGGCCAGCTGAGATCTGCCATCCTCGAGCTGTTCC...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGGGAACAGCTCGAGGATaGCAGATCTCAGCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWGTARG*QISAGH
Trigger: GTGGCCAGCTGAGATCTGCCATCCTCGAGCTGTTCC...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTGCCACAAAGTCCTGCCACTGCTGGTaGCCTGTCCAGTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: HTAAKRHFLNTTTSGATKSCHCW*PVQWPL
Trigger: CAGAGGCCACTGGACAGGCCACCAGCAGTGGCAGGA...CTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGGTTTTCTCCAGTGACTaGGGCCTTGGGCTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWVFSSD*GLGLAA
Trigger: TGCTGCCAGCCCAAGGCCCCAGTCACTGGAGAAAAC...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGAATGAGCAGTCTGTCTaGCGGCGGAAGTCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWNEQSV*RRKSQA
Trigger: GGCCTGAGACTTCCGCCGCCAGACAGACTGCTCATT...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCAATGAGCAGTCTGTCTaGCGGCGGAAGTCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLNEQSV*RRKSQA
Trigger: GGCCTGAGACTTCCGCCGCCAGACAGACTGCTCATT...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGACCAGGCCCGGGGATTaGCTAAGAGGCCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWTRPGD*LRGPGV
Trigger: GACCCCAGGGCCTCTTAGCCAATCCCCGGGCCTGGT...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTAAGTGCAGGTAGTTGCTaGCCTCCGACCATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLSAGSC*PPTICF
Trigger: GAAGCAGATGGTCGGAGGCCAGCAACTACCTGCACT...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTCCCCAAATGGTACCCTaGGGGCAGCTTGTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQAPQMVP*GQLVCS
Trigger: TGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGG...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTACAAAGCAGCCAATCATaGCCCCTTTCCCTCACTCCC +
Preference number: 4 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLQSSQS*PLSLTP
Trigger: GGGAGTGAGGGAAAGGGGCCATGATTGGCTGCTTTG...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTCGTGGACGGAGGCTATaGACAAGGTGGCCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGRGRRL*TRWPQP
Trigger: GGGCTGGGGCCACCTTGTCCATAGCCTCCGTCCACG...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CAA 72 bp TCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTaGGGTGCAGGCTTCACTGAGGATCTTCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SSTSGLHWATPG*GAGFTEDLPSP
Trigger: GGGAGAAGGAAGATCCTCAGTGAAGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CAA 72 bp ACACACACAGGTAGCACCCACCTCGATGAGACCGCCTaGCTCTGGCCTGCCCCAACCCTGGAAGTTGAAAAC +
Preference number: 4 (lower is better)
Translates to: THTGSTHLDETA*LWPAPTLEVEN
Trigger: GTTTTCAACTTCCAGGGTTGGGGCAGGCCAGAGCAAGGCGGTCTCATCGAGGTGGGTGCTACCTGTGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGTCCACCTGCTTGTTCTaGGCACTAGATCGACCTCGG +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWSTCLF*ALDRPR
Trigger: CCGAGGTCGATCTAGTGCTCAGAACAAGCAGGTGGA...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCTGGTCAAAGGTTCCTGAAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTCCTCCAAGTTCTGACTaGGCCAAGGGGCCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: PGQRFLKALESRLTGMRPPPSSD*AKGPSK
Trigger: TTTGGAGGGCCCCTTGGCTCAGTCAGAACTTGGAGG...AGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTTCAGGAACCTTTGACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGCTTCTCGCTCCTTTGTaGTTTCACCCTGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWLLAPL*FHPGSC
Trigger: GCAGGACCCAGGGTGAAATCACAAAGGAGCGAGAAG...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTTTGGGATTTGGTCCCTaGCCCAGCGAGGTCTCTGAC +
Preference number: 4 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFLGFGP*PSEVSD
Trigger: GTCAGAGACCTCGCTGGGTCAGGGACCAAATCCCAA...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GATATAGGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGTGTGACCTGATGAGGTaGAGCTGCCCGCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: DIGSLPPLDCTGPLQGWVCDLMR*SCPLLL
Trigger: CAGAAGGAGCGGGCAGCTTCACCTCATCAGGTCACA...CACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTTGTATCTCTCATCAGTaGCTAGCACCCGGCCTAGAA +
Preference number: 4 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQACISHQ*LAPGLE
Trigger: TTCTAGGCCGGGTGCTAGTCACTGATGAGAGATACA...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGAGTCCGGCTCCAGTaGGCAGACAGTGCCGAGCCT +
Preference number: 4 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLGVRLQ*ADSAEP
Trigger: AGGCTCGGCACTGTCTGCTCACTGGAGCCGGACTCC...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGACTGGCCATAGCCAATaGCAGGCTCCCACAGCAACT +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWTGHSQ*QAPTAT
Trigger: AGTTGCTGTGGGAGCCTGTCATTGGCTATGGCCAGT...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATCCCGCCCCTCCTaGACAGGGTCACTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFSSRPS*TGSLGS
Trigger: ACTTCCTAGTGACCCTGTGCAGGAGGGGCGGGATGA...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTAACAGACAAGGTCAGCTaGGGCAACTCAGCATGTCCA +
Preference number: 4 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLTDKVS*GNSACP
Trigger: TGGACATGCTGAGTTGCCGCAGCTGACCTTGTCTGT...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCCACCCAAGAAGCCACTaGAGTTCGGGGCTCCACATT +
Preference number: 4 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLHPRSH*SSGLHI
Trigger: AATGTGGAGCCCCGAACTGCAGTGGCTTCTTGGGTG...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCCTCACAGAAGGAGGCTaGTTCCTTCCCGCAGATGTC +
Preference number: 4 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLLTEGG*FLPADV
Trigger: GACATCTGCGGGAAGGAAGCAGCCTCCTTCTGTGAG...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTATCCCTTCTCGATGCTaGTTACAAAAGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQAIPSRC*LQKELG
Trigger: CCCCAGCTCCTTTTGTAAGCAGCATCGAGAAGGGAT...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGGTGCCAATGTCTGTGTaGTCCCAGCAGACCAGCAAG +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWVPMSV*SQQTSK
Trigger: CTTGCTGGTCTGCTGGGAGCACACAGACATTGGCAC...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTCACAGCCAACAGCCTTaGTGGCCTCAATGCAGCACC +
Preference number: 4 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFHSQQP*WPQCST
Trigger: GGTGCTGCATTGAGGCCAGCAAGGCTGTTGGCTGTG...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGGGGCCGGGGATGGCCTaGTGGCTAAGTTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWGPGMA*WLSWQS
Trigger: GCTTTGCCAACTTAGCCAGCAGGCCATCCCCGGCCC...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGTCGATGAGACCGCCTTaGTCTGGCCTGCCCCAACCC +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGSMRPP*SGLPQP
Trigger: GGGTTGGGGCAGGCCAGAGCAAGGCGGTCTCATCGA...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGCTCAAGGGCAGGCCGTaGAGAGACTTCCGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGLKGRP*RDFRSH
Trigger: GTGGCTCCGGAAGTCTCTCCACGGCCTGCCCTTGAG...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTGGAACAGCTCGAGGATaGCAGATCTCAGCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFGTARG*QISAGH
Trigger: GTGGCCAGCTGAGATCTGCCATCCTCGAGCTGTTCC...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTGTGAGTGCTTGGCCCTaGAGGCAGCGGTACTGGGGG +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVVSAWP*RQRYWG
Trigger: CCCCCAGTACCGCTGCCTCCAGGGCCAAGCACTCAC...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTGGTCCTGCCACTGCTaGTGGCCTGTCCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGWSCHC*WPVQWP
Trigger: AGGCCACTGGACAGGCCACCAGCAGTGGCAGGACCA...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTAACTGGGGCCTTGGGCTaGCAGCACCTATGGATTTAT +
Preference number: 4 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLTGALG*QHLWIY
Trigger: ATAAATCCATAGGTGCTGCCAGCCCAAGGCCCCAGT...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAACCAGGCCCGGGGATTaGCTAAGAGGCCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSTRPGD*LRGPGV
Trigger: GACCCCAGGGCCTCTTAGCCAATCCCCGGGCCTGGT...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGAGTGCAGGTAGTTGCTaGCCTCCGACCATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWSAGSC*PPTICF
Trigger: GAAGCAGATGGTCGGAGGCCAGCAACTACCTGCACT...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTCCGGGGATGGCCTGCTaGCTAAGTTGGCAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFPGMAC*LSWQSR
Trigger: TCTGCTTTGCCAACTTAGCCAGCAGGCCATCCCCGG...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CAA 72 bp ACAAAAGCAGCAGCGGCGACCCCACAGCCAACAGCCTaGCTGGCCTCAATGCAGCACCCTTGCATCTATAGA +
Preference number: 4 (lower is better)
Translates to: TKAAAATPQPTA*LASMQHPCIYR
Trigger: TCTATAGATGCAAGGGTGCTGCATTGAGGCCAGCAAGGCTGTTGGCTGTGGGGTCGCCGCTGCTGCTTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGTCCACCTCCAAGTTCTaGCTGAGCCAAGGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGSTSKF*LSQGAL
Trigger: GAGGGCCCCTTGGCTCAGTCAGAACTTGGAGGTGGA...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCTCCACCTCCAAGTTCTaGCTGAGCCAAGGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFSTSKF*LSQGAL
Trigger: GAGGGCCCCTTGGCTCAGTCAGAACTTGGAGGTGGA...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GATATAGGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGAAAGCCCCACAGCACTaGGCCTCACATAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: DIGSLPPLDCTGPLQGWVKAPQH*ASHNSS
Trigger: GCTGCTGTTATGTGAGGCTCAGTGCTGTGGGGCTTT...CACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGAAGGCTGCCTCCTTCTaGGCACACAAAGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWKAASF*AHKAPA
Trigger: AGCTGGTGCTTTGTGTGCTCAGAAGGAGGCAGCCTT...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTGCCACAAAGGAAAAGCACTGGTTTTaGCAGCGCCCTCCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: HTAAKRHFLNTTTSGATKEKHWF*QRPPAG
Trigger: TCCTGCCGGAGGGCGCTGTCAAAACCAGTGCTTTTC...CTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCCGCAGATGTCACACTaGTGCCACGGACATTCCCAT +
Preference number: 4 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFPQMSH*CHGHSH
Trigger: ATGGGAATGTCCGTGGCATCAGTGTGACATCTGCGG...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCAGTGGTTGGGACCTaGCTGAGGGTGAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGPVVGT*LRVRSL
Trigger: CAAGCTCCTCACCCTCAGTCAGGTCCCAACCACTGG...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACCCAGTGGTTGGGACCTaGCTGAGGGTGAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: KALESRLTGMRPVSLISDPVVGT*LRVRSL
Trigger: CAAGCTCCTCACCCTCAGTCAGGTCCCAACCACTGG...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTCATCAGCCTGTGGTGTaGCCTGATGAGGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFHQPVV*PDEVKL
Trigger: CAGCTTCACCTCATCAGGTCACACCACAGGCTGATG...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTATGTATCTCTCATCAGTaGCTAGCACCCGGCCTAGAA +
Preference number: 4 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLCISHQ*LAPGLE
Trigger: TTCTAGGCCGGGTGCTAGTCACTGATGAGAGATACA...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GATATAGGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCCAGGCTCACAGGGATaGGGCCTGTATCTCTCATCA +
Preference number: 4 (lower is better)
Translates to: DIGSLPPLDCTGPLQGWVPGSQG*GLYLSS
Trigger: TGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGG...CACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTCACTGCCCGAGGCTCTaGAATCTGAAAGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFHCPRL*NLKAPE
Trigger: CTCAGGTGCTTTCAGATTTCAGAGCCTCGGGCAGTG...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCTGGTCAAAGGTTCCTGAAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTCCTCGTCCCTCTGCCTaGGTTCAAGTGTCTCAACCT +
Preference number: 4 (lower is better)
Translates to: PGQRFLKALESRLTGMRPPRPSA*VQVSQP
Trigger: AGGTTGAGACACTTGAACTCAGGCAGAGGGACGAGG...AGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTTCAGGAACCTTTGACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp AAAATTCTCTTTGCTAACATTACCGGCGGTGACCAAACAATGTGTTTGGGCAGAGGGCCGGCATCAACCTaGGGGGAGGCGGAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: KILFANITGGDQTMCLGRGPAST*GEAEAE
Trigger: CTCGGCCTCCGCCTCCCCTCAGGTTGATGCCGGCCC...TCTGCCCAAACACATTGTTTGGTCACCGCCGGTAATGTTAGCAAAGAGAATTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511258.5
CDS-3UTR GCA 90 bp CCTGGTCAAAGGTTCCTGAAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGATCAGAACAAATCCTaGAGGGCCACCATGGGCGTC +
Preference number: 4 (lower is better)
Translates to: PGQRFLKALESRLTGMRPDQNKS*RATMGV
Trigger: GACGCCCATGGTGGCCCTGCAGGATTTGTTCTGATC...AGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTTCAGGAACCTTTGACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GATATAGGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGGATCAGAACAAATCCTaGAGGGCCACCATGGGCGTC +
Preference number: 4 (lower is better)
Translates to: DIGSLPPLDCTGPLQGWVDQNKS*RATMGV
Trigger: GACGCCCATGGTGGCCCTGCAGGATTTGTTCTGATC...CACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTTTCAAACATGACGATTaGTTTTCCAGCCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQAFKHDD*FSSHPG
Trigger: GCCTGGGTGGCTGGAAAAGCAATCGTCATGTTTGAA...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCCGGGAACTTACCTTGTaGACCTGCTCCTGTACCTTC +
Preference number: 4 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLRELTL*TCSCTF
Trigger: GAAGGTACAGGAGCAGGTGCACAAGGTAAGTTCCCG...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGTCTTGGTCCTGCCACTaGTGGTGGCCTGTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGSWSCH*WWPVQW
Trigger: CCACTGGACAGGCCACCAGCAGTGGCAGGACCAAGA...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTGCCACAAAGGCAAGTGCAGGTAGTTaGTGGCCTCCGACCATCTGC +
Preference number: 4 (lower is better)
Translates to: HTAAKRHFLNTTTSGATKASAGS*WPPTIC
Trigger: GCAGATGGTCGGAGGCCAGCAACTACCTGCACTTGC...CTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTAGACCAGCAAGACTGTaGCAGTGTCTGTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFRPARL*QCLSSH
Trigger: GTGGCTGGACAGACACTGGCACAGTCTTGCTGGTCT...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCCAGCCTCGTCCCTCTaGCTGAGTTCAAGTGTCTCA +
Preference number: 4 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFPASSL*LSSSVS
Trigger: TGAGACACTTGAACTCAGGCAGAGGGACGAGGCTGG...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGAGGAGTTCTATGCTCTaGAAACTCATCCCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWRSSML*KLIPPL
Trigger: GAGGGGCGGGATGAGTTTCCAGAGCATAGAACTCCT...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTCAAACTGGGAATTCCTaGCTCCTTTTCCATGTCACC +
Preference number: 4 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQAQTGNS*LLFHVT
Trigger: GGTGACATGGAAAAGGAGCCAGGAATTCCCAGTTTG...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTCTCAAGGGCAGGCCGTaGAGAGACTTCCGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGLKGRP*RDFRSH
Trigger: GTGGCTCCGGAAGTCTCTCCACGGCCTGCCCTTGAG...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTTTTTACACTGCATCTTaGCTGCAGCATGCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQAFYTAS*LQHASV
Trigger: GACAGAGGCATGCTGCAGCCAAGATGCAGTGTAAAA...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGCAAAAGTCATTGGCGTaGTATGCCACAGGACAGCGG +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWQKSLA*YATGQR
Trigger: CCGCTGTCCTGTGGCATACCACGCCAATGACTTTTG...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTATTTGTGATTTCACCCTaGGTCCTGCGCTTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLFVISP*VLRFPC
Trigger: ACAGGGAAAGCGCAGGACCCAGGGTGAAATCACAAA...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTGGAGGCAGCGGTACTaGGGGAGGCACATACTCACG +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWWRQRY*GRHILT
Trigger: CGTGAGTATGTGCCTCCCCCAGTACCGCTGCCTCCA...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGTGGAGGCAGCGGTACTaGGGGAGGCACATACTCACG +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGWRQRY*GRHILT
Trigger: CGTGAGTATGTGCCTCCCCCAGTACCGCTGCCTCCA...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTGAGAGCGACAGCATCTaGTTGGTGTCAGCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFESDSI*LVSAGG
Trigger: ACCTCCTGCTGACACCAACCAGATGCTGTCGCTCTC...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGTCCTGCCACTGCTGGTaGCCTGTCCAGTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLSCHCW*PVQWPL
Trigger: CAGAGGCCACTGGACAGGCCACCAGCAGTGGCAGGA...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCTGGTCAAAGGTTCCTGAAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGGTCTTTCCAGTGGTTaGGACCTGACTGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: PGQRFLKALESRLTGMRPGLSSG*DLTEGE
Trigger: CTCACCCTCAGTCAGGTCCCAACCACTGGAAAGACC...AGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTTCAGGAACCTTTGACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTAAAGATTGCCCACTCTTaGCGGCAAGTGCAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLKIAHS*RQVQVV
Trigger: AACTACCTGCACTTGCCGCCAAGAGTGGGCAATCTT...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGAGGTCTGATCCATCCTaGGCCGGCATCAACCTGGGG +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGRSDPS*AGINLG
Trigger: CCCCAGGTTGATGCCGGCCCAGGATGGATCAGACCT...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354179.8
CDS-3UTR CCA 90 bp CACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTGCCACAAAGAGACAGTGCCGAGCCTaGGAAGGGATCAACAGGGTG +
Preference number: 4 (lower is better)
Translates to: HTAAKRHFLNTTTSGATKRQCRA*EGINRV
Trigger: CACCCTGTTGATCCCTTCCCAGGCTCGGCACTGTCT...CTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGTGGGCTCCTCTAACCTaGCTGATAAACCCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWWAPLT*LINPKR
Trigger: CCTCTTGGGGTTTATCAGCCAGGTTAGAGGAGCCCA...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CAA 72 bp GTACTCTTCCTGAAGCTGGTGTGTCTAGCTCAGAGCTaGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: VLFLKLVCLAQS*PEIPYVHCPRL
Trigger: GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACACCAGCTTCAGGAAGAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTGAATGTAATAGAGCTTaGTTTGCTGCCCCACCCTTT +
Preference number: 4 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQAECNRA*FAAPPF
Trigger: AAAGGGTGGGGCAGCAAATCAAGCTCTATTACATTC...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTGACAGACATTCTCCTTaGGTGCAGCTCCTCCACCGC +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGDRHSP*VQLLHR
Trigger: GCGGTGGAGGAGCTGCACTCAAGGAGAATGTCTGTC...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGGACAGACATTCTCCTTaGGTGCAGCTCCTCCACCGC +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGDRHSP*VQLLHR
Trigger: GCGGTGGAGGAGCTGCACTCAAGGAGAATGTCTGTC...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCGACAGACATTCTCCTTaGGTGCAGCTCCTCCACCGC +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFDRHSP*VQLLHR
Trigger: GCGGTGGAGGAGCTGCACTCAAGGAGAATGTCTGTC...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTACGCCTAGGGGTAAAGTaGTTAGGGCAGATGATACTA +
Preference number: 4 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLRLGVK*LGQMIL
Trigger: TAGTATCATCTGCCCTAATCACTTTACCCCTAGGCG...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTACAGATAAGTCTGCAGTaGAGATCTGTACCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLQISLQ*RSVPCQ
Trigger: TTGGCAGGGTACAGATCTTCACTGCAGACTTATCTG...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCAGAGCAGCATGCGGTTaGTGCATTCAGAGTCTATCC +
Preference number: 4 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLRAACG*CIQSLS
Trigger: GGATAGACTCTGAATGCATCAACCGCATGCTGCTCT...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCGACATTTTGGGTGCCTaGGCAGCCATTCCTGTTGAT +
Preference number: 4 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLDILGA*AAIPVD
Trigger: ATCAACAGGAATGGCTGCTCAGGCACCCAAAATGTC...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCAGCAGGAGGTTTATCTaGCATTTTGGGTGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLSRRFI*HFGCLS
Trigger: GCTCAGGCACCCAAAATGTCAGATAAACCTCCTGCT...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCGGTAGCAATGGCCTCTaGCAAGTCCCTGCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFGSNGL*QVPARA
Trigger: AGCTCTGGCAGGGACTTGTCAGAGGCCATTGCTACC...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTGGGATTTGGTCCCTaGCCCAGCGAGGTCTCTGAC +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWLGFGP*PSEVSD
Trigger: GTCAGAGACCTCGCTGGGTCAGGGACCAAATCCCAA...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGGGTGCAGGCTTCACTaGGGATCTTCCTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGGCRLH*GSSFSP
Trigger: TGGGGAGAAGGAAGATCCTCAGTGAAGCCTGCACCC...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGGGGGCAGAAGGGAGCTaGGGAAGACCCAACAACCAG +
Preference number: 4 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWGAEGS*GRPNNQ
Trigger: CTGGTTGTTGGGTCTTCCTCAGCTCCCTTCTGCCCC...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCGTTCTCGGTCTCCCTaGAGTACAGCATCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFRSRSP*STASRV
Trigger: GACTCTTGATGCTGTACTGCAGGGAGACCGAGAACG...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGTCATCCCGCCCCTCCTaGACAGGGTCACTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGSSRPS*TGSLGS
Trigger: ACTTCCTAGTGACCCTGTGCAGGAGGGGCGGGATGA...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTCGGGAACTTACCTTGTaGACCTGCTCCTGTACCTTC +
Preference number: 4 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFRELTL*TCSCTF
Trigger: GAAGGTACAGGAGCAGGTGCACAAGGTAAGTTCCCG...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GATATAGGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGTATGCCCCAGACCTTTaGTGGCAGGCCATGAACTTG +
Preference number: 4 (lower is better)
Translates to: DIGSLPPLDCTGPLQGWVYAPDL*WQAMNL
Trigger: CAAGTTCATGGCCTGCCAGCAAAGGTCTGGGGCATA...CACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGACCATCTGCTTCGCCTaGTTCACCAGGCCCGGGGAT +
Preference number: 4 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLTICFA*FTRPGD
Trigger: ATCCCCGGGCCTGGTGAAGCAGGCGAAGCAGATGGT...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAACCATCTGCTTCGCCTaGTTCACCAGGCCCGGGGAT +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSTICFA*FTRPGD
Trigger: ATCCCCGGGCCTGGTGAAGCAGGCGAAGCAGATGGT...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTTGGCCTCCGACCATCTaGTTCGCCTGCTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVWPPTI*FACFTR
Trigger: CCTGGTGAAGCAGGCGAAGCAGATGGTCGGAGGCCA...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCGCAAGTGCAGGTAGTTaGTGGCCTCCGACCATCTGC +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFASAGS*WPPTIC
Trigger: GCAGATGGTCGGAGGCCAGCAACTACCTGCACTTGC...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTAGGGCCCAGGGACTTTaGTCTGTGGTTACCAACTTC +
Preference number: 4 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFRAQGL*SVVTNF
Trigger: GAAGTTGGTAACCACAGAGCAAAGTCCCTGGGCCCT...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CAGGAAATCGCCACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGAACTCAGGACAGCCCTaGCCAGCCTCGTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: QEIATDLKEHHFLPRVPRNSGQP*PASSLC
Trigger: GCAGAGGGACGAGGCTGGGCAGGGCTGTCCTGAGTT...CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCAACAGGGTGTTTCATaGCCTGACCATAGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFQQGVS*PDHSVG
Trigger: CCCCACACTATGGTCAGGGCATGAAACACCCTGTTG...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACCCGGGTTTCTTGAGCTaGCAGTCCCTCAACCCTTGG +
Preference number: 4 (lower is better)
Translates to: KALESRLTGMRPVSLISDPGFLS*QSLNPW
Trigger: CCAAGGGTTGAGGGACTGGCAGCTCAAGAAACCCGG...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTAGCTCTCTAACAACCTaGTCCAGGCAGCGTGGACGG +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGSSLTT*SRQRGR
Trigger: CCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCT...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAGGTCTGATCCATCCTaGGCCGGCATCAACCTGAGG +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFRSDPS*AGINLR
Trigger: CCTCAGGTTGATGCCGGCCCAGGATGGATCAGACCT...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000347982.8
CDS-3UTR CCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTCTCCTCATTTATAACTaGGGGTTCTGCCATAACTGG +
Preference number: 4 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQALLIYN*GFCHNW
Trigger: CCAGTTATGGCAGAACCCCCAGTTATAAATGAGGAG...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTCCAAAGGAGAGCCTTTaGTATCAGAAGAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQAPKESL*YQKSSI
Trigger: AATGCTGCTCTTCTGATACCAAAGGCTCTCCTTTGG...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGGGTTTAGTGCGCCTTTaGTTTAAACGCTGCCACCGC +
Preference number: 4 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWGLVRL*FKRCHR
Trigger: GCGGTGGCAGCGTTTAAACCAAAGGCGCACTAAACC...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTGCCACAAAGCAGGTTATACAGATGTaGAGGGAGCACCGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: HTAAKRHFLNTTTSGATKQVIQM*REHRKP
Trigger: GGGCTTCCGGTGCTCCCTCCACATCTGTATAACCTG...CTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGCAAAAGTCATTGGCGTaGTATGCCACAGGACAGCGG +
Preference number: 4 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWQKSLA*YATGQR
Trigger: CCGCTGTCCTGTGGCATACCACGCCAATGACTTTTG...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTCCAGGCAAAAGTCATTaGCGTGGTATGCCACAGGAC +
Preference number: 4 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFPGKSH*RGMPQD
Trigger: GTCCTGTGGCATACCACGCCAATGACTTTTGCCTGG...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGCGGCAGGACACACTGTaGGGTGGCACTCATAGAGCA +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGRQDTL*GGTHRA
Trigger: TGCTCTATGAGTGCCACCCCACAGTGTGTCCTGCCG...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTCGGCAGGACACACTGTaGGGTGGCACTCATAGAGCA +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGRQDTL*GGTHRA
Trigger: TGCTCTATGAGTGCCACCCCACAGTGTGTCCTGCCG...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTAATGGGTTGATTCTTTaGCCTTACACCCAAGAAGCC +
Preference number: 4 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQANGLIL*PYTQEA
Trigger: GGCTTCTTGGGTGTAAGGCCAAAGAATCAACCCATT...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGTGGAGGCAGCGGTACTaGGGGAGGCACATACTCACG +
Preference number: 4 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLWRQRY*GRHILT
Trigger: CGTGAGTATGTGCCTCCCCCAGTACCGCTGCCTCCA...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCACCTTATCTAAAGGCTaGGGCCTGGAGTCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLTLSKG*GLESVL
Trigger: GAGAACTGACTCCAGGCCCCAGCCTTTAGATAAGGT...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTCCAGTGGCCTCTGGCTaGAAACCAAGGATTGGGATT +
Preference number: 4 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFPVASG*KPRIGI
Trigger: AATCCCAATCCTTGGTTTCCAGCCAGAGGCCACTGG...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTGCCACAAAGGGTTTGTCGCTTAGCTaGGGTCTTGGTCCTGCCACT +
Preference number: 4 (lower is better)
Translates to: HTAAKRHFLNTTTSGATKGLSLS*GLGPAT
Trigger: AGTGGCAGGACCAAGACCCCAGCTAAGCGACAAACC...CTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCGGATTTATCCAGCCTTaGGTCAGCCGTCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFGFIQP*VSRPQR
Trigger: CCTCTGGGGACGGCTGACCCAAGGCTGGATAAATCC...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGGATTTATCCAGCCTTaGGTCAGCCGTCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGGFIQP*VSRPQR
Trigger: CCTCTGGGGACGGCTGACCCAAGGCTGGATAAATCC...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGAATGAGCAGTCTGTCTaGCGGCGGAAGTCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWNEQSV*RRKSQA
Trigger: GGCCTGAGACTTCCGCCGCCAGACAGACTGCTCATT...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCTGGTCAAAGGTTCCTGAAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGGCCTGTCTGAAGTCTaGGGTTTGGGACTGCTAGTA +
Preference number: 4 (lower is better)
Translates to: PGQRFLKALESRLTGMRPGLSEV*GLGLLV
Trigger: TACTAGCAGTCCCAAACCCCAGACTTCAGACAGGCC...AGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTTCAGGAACCTTTGACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCGGAGGTGGGAGTCTCTaGGACAAAGAGGCATGGGGT +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFGGGSL*DKEAWG
Trigger: ACCCCATGCCTCTTTGTCCCAGAGACTCCCACCTCC...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCTGCCCGCTCCTTCTaGCGAGGAGTTAGGTCTATG +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGAARSF*RGVRSM
Trigger: CATAGACCTAACTCCTCGCCAGAAGGAGCGGGCAGC...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CAGGAAATCGCCACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTCTGTCCAGCCACTATaGGCCAGAGCCCTGCCCGTG +
Preference number: 4 (lower is better)
Translates to: QEIATDLKEHHFLPRVPRSVQPL*ARALPV
Trigger: CACGGGCAGGGCTCTGGCCCATAGTGGCTGGACAGA...CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GATATAGGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCCCCAAATGGTACCCTaGGGGCAGCTTGTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: DIGSLPPLDCTGPLQGWVPQMVP*GQLVCS
Trigger: TGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGG...CACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTAACAGCACTTCCTGTTaGCAGTCTGTGAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFNSTSC*QSVSWV
Trigger: CACCCAGCTCACAGACTGCCAACAGGAAGTGCTGTT...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCGGAGGGGTAGACAAGTaGGAGGAAACTAGCCAAACA +
Preference number: 4 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLGGVDK*EETSQT
Trigger: TGTTTGGCTAGTTTCCTCCCACTTGTCTACCCCTCC...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TGTCCTGTGAGACATCTAGACTGCTGTCAAGTTGATTACCTACCAAAGCCTACTGACGTCCCACAGGGCTaGCAAGGCCACTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: CPVRHLDCCQVDYLPKPTDVPQG*QGHSLP
Trigger: GGGGAGGGAGTGGCCTTGCCAGCCCTGTGGGACGTC...AGTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCTAGATGTCTCACAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGGGCCTCCTGGGGAGCTaGCTCCAAGGCAAACACTCT +
Preference number: 4 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWGLLGS*LQGKHS
Trigger: AGAGTGTTTGCCTTGGAGCCAGCTCCCCAGGAGGCC...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCCACTATAGCAGCCTCTaGCCCTGTTGCACTGGCCCT +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFHYSSL*PCCTGP
Trigger: AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTG...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGCACTATAGCAGCCTCTaGCCCTGTTGCACTGGCCCT +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGHYSSL*PCCTGP
Trigger: AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTG...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCACTGCTCCAGGCAGCGTaGACGGAGGCTATGGACAAG +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSLLQAA*TEAMDK
Trigger: CTTGTCCATAGCCTCCGTCCACGCTGCCTGGAGCAG...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGAGGTCTGATCCATCCTaGGCCGGCATCAACCGTGCC +
Preference number: 4 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLRSDPS*AGINRA
Trigger: GGCACGGTTGATGCCGGCCCAGGATGGATCAGACCT...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439151.7
CDS-3UTR TCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGTAGTTCACAGGTCTaGTCCATCCTGGGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVGSSQV*SILGRH
Trigger: ATGCCGGCCCAGGATGGATCAGACCTGTGAACTACC...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GATATAGGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCTCTCGAGAACACTTTaGGATCAAAGCACCCTCAGG +
Preference number: 4 (lower is better)
Translates to: DIGSLPPLDCTGPLQGWVLSRTL*DQSTLR
Trigger: CCTGAGGGTGCTTTGATCTCAAAGTGTTCTCGAGAG...CACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCATGTTCCAGAGTCACTaGCATCCTCACCTAAGGATC +
Preference number: 4 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLMFQSH*HPHLRI
Trigger: GATCCTTAGGTGAGGATGTCAGTGACTCTGGAACAT...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTGCCACAAAGGGATTGGCGGAGTTCTaGGTGCCATCTCCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: HTAAKRHFLNTTTSGATKGLAEF*VPSPFF
Trigger: GAAAAAGGGAGATGGCACTCAGAACTCCGCCAATCC...CTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCACCTCCAAGTTCTGACTaGGCCAAGGGGCCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSPPSSD*AKGPSK
Trigger: TTTGGAGGGCCCCTTGGCTCAGTCAGAACTTGGAGG...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCTGGTCAAAGGTTCCTGAAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTAGAGCAGCATGCGGTTaGTGCATTCAGAGTCTATCC +
Preference number: 4 (lower is better)
Translates to: PGQRFLKALESRLTGMRPRAACG*CIQSLS
Trigger: GGATAGACTCTGAATGCATCAACCGCATGCTGCTCT...AGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTTCAGGAACCTTTGACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTGAAAAGCACTGGTTTTaGCAGCGCCCTCCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGEKHWF*QRPPAG
Trigger: TCCTGCCGGAGGGCGCTGTCAAAACCAGTGCTTTTC...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTTGGGACCAGCATCAATaGTTCGGTCTTTGTCTAGGG +
Preference number: 4 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFWDQHQ*FGLCLG
Trigger: CCCTAGACAAAGACCGAATCATTGATGCTGGTCCCA...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTCTTCTCGCTCCTTTGTaGTTTCACCCTGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGLLAPL*FHPGSC
Trigger: GCAGGACCCAGGGTGAAATCACAAAGGAGCGAGAAG...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTGTCGCTTGGTCAGATTaGGACAGTCTGCGTGGTAAA +
Preference number: 4 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFVAWSD*DSLRGK
Trigger: TTTACCACGCAGACTGTCTCAATCTGACCAAGCGAC...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGTAGCAATGGCCTCTaGCAAGTCCCTGCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVGSNGL*QVPARA
Trigger: AGCTCTGGCAGGGACTTGTCAGAGGCCATTGCTACC...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCACCCAGCGAGGTCTCTaGCCTTATCTAAAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFTQRGL*PYLKAG
Trigger: CCCAGCCTTTAGATAAGGTCAGAGACCTCGCTGGGT...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCGTCAGTAGGCCTGTCTaGAGTCTGGGGTTTGGGACT +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFVSRPV*SLGFGT
Trigger: AGTCCCAAACCCCAGACTTCAGACAGGCCTACTGAC...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACGTCAGTAGGCCTGTCTaGAGTCTGGGGTTTGGGACT +
Preference number: 4 (lower is better)
Translates to: KALESRLTGMRPVSLISDVSRPV*SLGFGT
Trigger: AGTCCCAAACCCCAGACTTCAGACAGGCCTACTGAC...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGGAGGAGTTAGGTCTATaGGATCCATCACCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWEELGL*DPSPKQ
Trigger: CTGCTTTGGTGATGGATCTCATAGACCTAACTCCTC...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTTGTGACCTGATGAGGTaGAGCTGCCCGCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVCDLMR*SCPLLL
Trigger: CAGAAGGAGCGGGCAGCTTCACCTCATCAGGTCACA...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGCATCAGCCTGTGGTGTaGCCTGATGAGGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGHQPVV*PDEVKL
Trigger: CAGCTTCACCTCATCAGGTCACACCACAGGCTGATG...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTGCTTTCCCAGATGTCTaGAGAGGATCTGACACACAG +
Preference number: 4 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFAFPDV*RGSDTQ
Trigger: CTGTGTGTCAGATCCTCTTCAGACATCTGGGAAAGC...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGTCTGGCCTGGGTGAGTaGTTTAACAGCTTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGSGLGE*FNSLPG
Trigger: CCCTGGCAAGCTGTTAAATCACTCACCCAGGCCAGA...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGTGCAGAAGCTCTTCCTaGGGCCTGAGTTGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGCRSSS*GLSCWL
Trigger: GAGCCAACAACTCAGGCCTCAGGAAGAGCTTCTGCA...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGTGCAGAAGCTCTTCCTaGGGCCTGAGTTGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: PCGKVGGKRPKSVCLLGWCRSSS*GLSCWL
Trigger: GAGCCAACAACTCAGGCCTCAGGAAGAGCTTCTGCA...CCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGCTATACCTTCCAACCTaGCCAGCGGAATTGAATTCC +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWLYLPT*PAELNS
Trigger: GGAATTCAATTCCGCTGGTCAGGTTGGAAGGTATAG...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTCCTCGTCCCTCTGCCTaGGTTCAAGTGTCTCAACCT +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGPRPSA*VQVSQP
Trigger: AGGTTGAGACACTTGAACTCAGGCAGAGGGACGAGG...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGGAACGAAGCCTCCAATaGATGGCGGAGAATGGAAAG +
Preference number: 4 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWERSLQ*MAENGK
Trigger: CTTTCCATTCTCCGCCATTCATTGGAGGCTTCGTTC...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTCAAGGCAAACACTCTTaGGATCTCAATTTCCAAGCA +
Preference number: 4 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQAQGKHS*DLNFQA
Trigger: TGCTTGGAAATTGAGATCTCAAGAGTGTTTGCCTTG...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTGCCCTCAATGGGGAACCCGGGTTTCTTaGGCTGCCAGTCCCTCAACC +
Preference number: 4 (lower is better)
Translates to: TDLKEHHFLPRVPRCPQWGTRVS*AASPST
Trigger: GGTTGAGGGACTGGCAGCTCAAGAAACCCGGGTTCC...CCATTGAGGGCACCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCTGGTCAAAGGTTCCTGAAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTTGGGATCCAGGTCACTaGTTCCATCATCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: PGQRFLKALESRLTGMRPWDPGH*FHHQKW
Trigger: CCACTTCTGATGATGGAAGCAGTGACCTGGATCCCA...AGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTTCAGGAACCTTTGACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCTCGGTTCCAGGCTCTaGACTCTTAGTACAACCCAT +
Preference number: 4 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFLGSRL*TLSTTH
Trigger: ATGGGTTGTACTAAGAGTGCAGAGCCTGGAACCGAG...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCGCAGTCATCAACCGCTaGTCCTTCGTCTTACTATCA +
Preference number: 4 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLAVINR*SFVLLS
Trigger: TGATAGTAAGACGAAGGAGCAGCGGTTGATGACTGC...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCTGGTCAAAGGTTCCTGAAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTACACTGCATCTTGGCTaGAGCATGCCTCTGTCGTTT +
Preference number: 4 (lower is better)
Translates to: PGQRFLKALESRLTGMRPTLHLG*SMPLSF
Trigger: AAACGACAGAGGCATGCTGCAGCCAAGATGCAGTGT...AGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTTCAGGAACCTTTGACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGTCATTGGCGTGGTATaGCACAGGACAGCGGACACA +
Preference number: 4 (lower is better)
Translates to: PCGKVGGKRPKSVCLLGWVIGVV*HRTADT
Trigger: TGTGTCCGCTGTCCTGTGGCATACCACGCCAATGAC...CCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GATATAGGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCCATCTTATCCTTGCTaGTCACGTCACCCTCCATGT +
Preference number: 4 (lower is better)
Translates to: DIGSLPPLDCTGPLQGWVPSYPC*SRHPPC
Trigger: ACATGGAGGGTGACGTGAGCAGCAAGGATAAGATGG...CACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGTCCCATCCACTCCTTTaGCCATCTTATCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWSHPLL*PSYPCC
Trigger: GCAGCAAGGATAAGATGGGCAAAGGAGTGGATGGGA...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTCACCCAAGAAGCCACTaGAGTTCGGGGCTCCACATT +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGHPRSH*SSGLHI
Trigger: AATGTGGAGCCCCGAACTGCAGTGGCTTCTTGGGTG...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCTCACAGAAGGAGGCTaGTTCCTTCCCGCAGATGTC +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGLTEGG*FLPADV
Trigger: GACATCTGCGGGAAGGAAGCAGCCTCCTTCTGTGAG...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAGGCCCACAGGGGTCATaGTCAGTACAAGACAGACGC +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSGPQGS*SVQDRR
Trigger: GCGTCTGTCTTGTACTGAGCATGACCCCTGTGGGCC...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTAGTCCACAGGCCTCAGTaGTTTTTCTTTAGCTACAAG +
Preference number: 4 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLVHRPQ*FFFSYK
Trigger: CTTGTAGCTAAAGAAAAAGCACTGAGGCCTGTGGAC...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGACAGCTCTCGGCATATaGCCCAGACCTTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PCGKVGGKRPKSVCLLGWTALGI*PRPLLA
Trigger: TGCCAGCAAAGGTCTGGGGCATATGCCGAGAGCTGT...CCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGACAGCTCTCGGCATATaGCCCAGACCTTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWTALGI*PRPLLA
Trigger: TGCCAGCAAAGGTCTGGGGCATATGCCGAGAGCTGT...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGCAAGTGCAGGTAGTTaGTGGCCTCCGACCATCTGC +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVASAGS*WPPTIC
Trigger: GCAGATGGTCGGAGGCCAGCAACTACCTGCACTTGC...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGAGACCAGCAAGACTGTaGCAGTGTCTGTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGRPARL*QCLSSH
Trigger: GTGGCTGGACAGACACTGGCACAGTCTTGCTGGTCT...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGGTGCCAATGTCTGTGTaGTCCCAGCAGACCAGCAAG +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGVPMSV*SQQTSK
Trigger: CTTGCTGGTCTGCTGGGAGCACACAGACATTGGCAC...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGCTGATCTTGAGACTCTaGACAGCCCAGACAAAAGCA +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWLILRL*TAQTKA
Trigger: TGCTTTTGTCTGGGCTGTGCAGAGTCTCAAGATCAG...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GATATAGGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGAAGTCAGCAGGCAGGTaGTCTCAATACAGAGCACAG +
Preference number: 4 (lower is better)
Translates to: DIGSLPPLDCTGPLQGWVKSAGR*SQYRAQ
Trigger: CTGTGCTCTGTATTGAGAGCACCTGCCTGCTGACTT...CACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTCCGGGTTTCTTGAGCTaGCAGTCCCTCAACCCTTGG +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVPGFLS*QSLNPW
Trigger: CCAAGGGTTGAGGGACTGGCAGCTCAAGAAACCCGG...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTGTCAGCTTGCCTCTTTaGCAAGACCTAGGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGVSLPL*QDLGGG
Trigger: GCCGCCTCCTAGGTCTTGGCAAAGAGGCAAGCTGAC...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp TATTCCAAAAGCCACTTGCTTGGCTTCCTAAGGCGTTTCTTCTCTGACCGCACACTGGGAGGCGGAGGTTaGAGTGAGCCTAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: YSKSHLLGFLRRFFSDRTLGGGG*SEPRSC
Trigger: GCACGATCTAGGCTCACTGCAACCTCCGCCTCCCAG...TGTGCGGTCAGAGAAGAAACGCCTTAGGAAGCCAAGCAAGTGGCTTTTGGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375350.3
CDS-3UTR CCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCTGCAGGGCCACCATaGGCGTCTCTTGAATTTTGC +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGPAGPP*ASLEFC
Trigger: GCAAAATTCAAGAGACGCCCATGGTGGCCCTGCAGG...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGTTTTACACTGCATCTTaGCTGCAGCATGCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWFYTAS*LQHASV
Trigger: GACAGAGGCATGCTGCAGCCAAGATGCAGTGTAAAA...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGCTGCATAACAGTGGGTaGGTACTTCTGGACACACTC +
Preference number: 4 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWLHNSG*VLLDTL
Trigger: GAGTGTGTCCAGAAGTACCCACCCACTGTTATGCAG...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACATGGCAGATCTCAGCTaGCCACCACCTGTATCGTCC +
Preference number: 4 (lower is better)
Translates to: KALESRLTGMRPVSLISDMADLS*PPPVSS
Trigger: GGACGATACAGGTGGTGGCCAGCTGAGATCTGCCAT...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGTTCCCATTTCCCTGCTaGTCGCTTGGTCAGATTGAG +
Preference number: 4 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWFPFPC*SLGQIE
Trigger: CTCAATCTGACCAAGCGACCAGCAGGGAAATGGGAA...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTTTCCCATTTCCCTGCTaGTCGCTTGGTCAGATTGAG +
Preference number: 4 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFFPFPC*SLGQIE
Trigger: CTCAATCTGACCAAGCGACCAGCAGGGAAATGGGAA...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGGCTTACAAAAGGAGCTaGGGCACATCTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWAYKRS*GTSHRR
Trigger: CCTTCTGTGAGATGTGCCCCAGCTCCTTTTGTAAGC...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACGAGAGCGACAGCATCTaGTTGGTGTCAGCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: KALESRLTGMRPVSLISDESDSI*LVSAGG
Trigger: ACCTCCTGCTGACACCAACCAGATGCTGTCGCTCTC...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTACCTTATCTAAAGGCTaGGGCCTGGAGTCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFTLSKG*GLESVL
Trigger: GAGAACTGACTCCAGGCCCCAGCCTTTAGATAAGGT...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTCTGGAAACCAAGGATTaGGATTTGGTCCCTGACCCA +
Preference number: 4 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFLETKD*DLVPDP
Trigger: TGGGTCAGGGACCAAATCCCAATCCTTGGTTTCCAG...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCGGTTTGTCGCTTAGCTaGGGTCTTGGTCCTGCCACT +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFGLSLS*GLGPAT
Trigger: AGTGGCAGGACCAAGACCCCAGCTAAGCGACAAACC...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGGTGAGGAGCTTGGGCTaGTCACTGGAGAGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGVRSLG*SLERVC
Trigger: ACAAACCCTCTCCAGTGACCAGCCCAAGCTCCTCAC...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACGTGAGGAGCTTGGGCTaGTCACTGGAGAGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: KALESRLTGMRPVSLISDVRSLG*SLERVC
Trigger: ACAAACCCTCTCCAGTGACCAGCCCAAGCTCCTCAC...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGTTTTCTCCAGTGACTaGGGCCTTGGGCTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLVFSSD*GLGLAA
Trigger: TGCTGCCAGCCCAAGGCCCCAGTCACTGGAGAAAAC...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GATATAGGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGGAAGTCTCAGGCCAGTaGGAACTGAGGTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: DIGSLPPLDCTGPLQGWVEVSGQ*ELRFSP
Trigger: TGGAGAAAACCTCAGTTCCCACTGGCCTGAGACTTC...CACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTGGAGGTGGGAGTCTCTaGGACAAAGAGGCATGGGGT +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGGGGSL*DKEAWG
Trigger: ACCCCATGCCTCTTTGTCCCAGAGACTCCCACCTCC...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGAGGTGGGAGTCTCTaGGACAAAGAGGCATGGGGT +
Preference number: 4 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLGGGSL*DKEAWG
Trigger: ACCCCATGCCTCTTTGTCCCAGAGACTCCCACCTCC...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGCTGCCCGCTCCTTCTaGCGAGGAGTTAGGTCTATG +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVAARSF*RGVRSM
Trigger: CATAGACCTAACTCCTCGCCAGAAGGAGCGGGCAGC...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTGTCTGTCTCCTTGGTTaGGGCCCACTGGATTTTCAT +
Preference number: 4 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFVCLLG*GPLDFH
Trigger: ATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGAC...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGACCTGGGGGCTTGGGCTaGGGTCTTCGAGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRPGGLG*GLRGLR
Trigger: CCTGAGGCCTCGAAGACCCCAGCCCAAGCCCCCAGG...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000354179.8
CDS-3UTR CCA 90 bp CCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGGGCTCTGTCTGGTTaGGGAAATCGCTTTGAGAGC +
Preference number: 4 (lower is better)
Translates to: PCGKVGGKRPKSVCLLGWGALSG*GNRFES
Trigger: GCTCTCAAAGCGATTTCCCCAACCAGACAGAGCCCC...CCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAGCCAACAGCCTTGCTaGCCTCAATGCAGCACCCTT +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFSQQPC*PQCSTL
Trigger: AAGGGTGCTGCATTGAGGCCAGCAAGGCTGTTGGCT...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGTTCAGGGAAGGGTTCTaGCTTGCCTTTGAGCTAAGT +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWFREGF*LAFELS
Trigger: ACTTAGCTCAAAGGCAAGCCAGAACCCTTCCCTGAA...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTTGGCAGTCTGTGAGCTaGGTGAATGGTAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGWQSVS*VNGRAG
Trigger: CCCTGCCCTACCATTCACCCAGCTCACAGACTGCCA...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTTGGCAGTCTGTGAGCTaGGTGAATGGTAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVWQSVS*VNGRAG
Trigger: CCCTGCCCTACCATTCACCCAGCTCACAGACTGCCA...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GATATAGGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGAAAAGGGCACAGGACTaGCACCAAGCAAACCCTACT +
Preference number: 4 (lower is better)
Translates to: DIGSLPPLDCTGPLQGWVKRAQD*HQANPT
Trigger: AGTAGGGTTTGCTTGGTGCCAGTCCTGTGCCCTTTT...CACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTAGACAGTGCCGAGCCTaGGAAGGGATCAACAGGGTG +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVRQCRA*EGINRV
Trigger: CACCCTGTTGATCCCTTCCCAGGCTCGGCACTGTCT...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTATGTGACTGGCTGTTCTaGGTCCATTTCAGAATCTAC +
Preference number: 4 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLCDWLF*VHFRIY
Trigger: GTAGATTCTGAAATGGACCCAGAACAGCCAGTCACA...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439151.7
3UTR CAA 72 bp GGTGGTTCAAGAAGTTTTGCGAAGCAGGCGAGACCCTaGAAGATGAGGAGTAGTAGCCGGCCATGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: GGSRSFAKQARP*KMRSSSRPWEV
Trigger: AACTTCCCATGGCCGGCTACTACTCCTCATCTTCAAGGGTCTCGCCTGCTTCGCAAAACTTCTTGAACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644863.1
CDS-3UTR TCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGGCAGAGCTTCACTTTTaGACCACACACCAGGCTTCG +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWAELHF*TTHQAS
Trigger: CGAAGCCTGGTGTGTGGTTCAAAAGTGAAGCTCTGC...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCGCAGAGCTTCACTTTTaGACCACACACCAGGCTTCG +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFAELHF*TTHQAS
Trigger: CGAAGCCTGGTGTGTGGTTCAAAAGTGAAGCTCTGC...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTCAGAGAGATTAACCTaGGACGTCTCGGTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWSERLT*DVSVPG
Trigger: GCCTGGAACCGAGACGTCTCAGGTTAATCTCTCTGA...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCTGACTGGGGTTTGTaGACAAGAGTAGATGCCTTC +
Preference number: 4 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFSDWGL*TRVDAF
Trigger: GAAGGCATCTACTCTTGTTCACAAACCCCAGTCAGA...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTGGATTGGCGGAGTTCTaGGTGCCATCTCCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGGLAEF*VPSPFF
Trigger: GAAAAAGGGAGATGGCACTCAGAACTCCGCCAATCC...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGGATTGGCGGAGTTCTaGGTGCCATCTCCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGGLAEF*VPSPFF
Trigger: GAAAAAGGGAGATGGCACTCAGAACTCCGCCAATCC...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGGTCACACTTGGAAGCTaGTTCAGTTTTCTTTTGCGC +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWVTLGS*FSFLLR
Trigger: GCGCAAAAGAAAACTGAATCAGCTTCCAAGTGTGAC...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GATATAGGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCTCAAGTATGCTTGCTaGAGGAGTTCTATGCTCTGG +
Preference number: 4 (lower is better)
Translates to: DIGSLPPLDCTGPLQGWVLKYAC*RSSMLW
Trigger: CCAGAGCATAGAACTCCTTCAGCAAGCATACTTGAG...CACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGCTCAAGTATGCTTGCTaGAGGAGTTCTATGCTCTGG +
Preference number: 4 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWLKYAC*RSSMLW
Trigger: CCAGAGCATAGAACTCCTTCAGCAAGCATACTTGAG...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGTCTAAGCAGTCAGCATaGTTTTGCTCTGTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWSKQSA*FCSVSG
Trigger: ACCACTGACAGAGCAAAATCATGCTGACTGCTTAGA...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTCTTGTGGCCGTCCTGTaGGGCATTAGTTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVLVAVL*GISSPS
Trigger: AGAGGGAGAACTAATGCCTCACAGGACGGCCACAAG...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCTTGTGGCCGTCCTGTaGGGCATTAGTTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVLVAVL*GISSPS
Trigger: AGAGGGAGAACTAATGCCTCACAGGACGGCCACAAG...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTGCTGGATTAGCAGCATaGCAGGTTATACAGATGTGG +
Preference number: 4 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFAGLAA*QVIQMW
Trigger: CCACATCTGTATAACCTGTCATGCTGCTAATCCAGC...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTAAGGCTGCCTCCTTCTaGGCACACAAAGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGKAASF*AHKAPA
Trigger: AGCTGGTGCTTTGTGTGCTCAGAAGGAGGCAGCCTT...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTCTTCTCGCTCCTTTGTaGTTTCACCCTGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVLLAPL*FHPGSC
Trigger: GCAGGACCCAGGGTGAAATCACAAAGGAGCGAGAAG...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGCCGCAGATGTCACACTaGTGCCACGGACATTCCCAT +
Preference number: 4 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLPQMSH*CHGHSH
Trigger: ATGGGAATGTCCGTGGCATCAGTGTGACATCTGCGG...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGAGCAGCCATTCCTGTTaGTTGCTCTGCCAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWSSHSC*LLCQVS
Trigger: ACTCACCTGGCAGAGCAATCAACAGGAATGGCTGCT...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTAGCAGCCATTCCTGTTaGTTGCTCTGCCAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGSSHSC*LLCQVS
Trigger: ACTCACCTGGCAGAGCAATCAACAGGAATGGCTGCT...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTGCCCTCAATGGGGTAGCAATGGCCTCTaGCAAGTCCCTGCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: TDLKEHHFLPRVPRCPQWGSNGL*QVPARA
Trigger: AGCTCTGGCAGGGACTTGTCAGAGGCCATTGCTACC...CCATTGAGGGCACCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTACCCAGCGAGGTCTCTaGCCTTATCTAAAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVTQRGL*PYLKAG
Trigger: CCCAGCCTTTAGATAAGGTCAGAGACCTCGCTGGGT...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGTCAGTAGGCCTGTCTaGAGTCTGGGGTTTGGGACT +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVVSRPV*SLGFGT
Trigger: AGTCCCAAACCCCAGACTTCAGACAGGCCTACTGAC...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCTGGTCAAAGGTTCCTGAAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTTGTCTGAAGAGGATCTaGCACACAGCCTTTCTCAAC +
Preference number: 4 (lower is better)
Translates to: PGQRFLKALESRLTGMRPCLKRI*HTAFLN
Trigger: GTTGAGAAAGGCTGTGTGTCAGATCCTCTTCAGACA...AGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTTCAGGAACCTTTGACCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGTCTGGCCTGGGTGAGTaGTTTAACAGCTTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLSGLGE*FNSLPG
Trigger: CCCTGGCAAGCTGTTAAATCACTCACCCAGGCCAGA...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTTGCAGAAGCTCTTCCTaGGGCCTGAGTTGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGCRSSS*GLSCWL
Trigger: GAGCCAACAACTCAGGCCTCAGGAAGAGCTTCTGCA...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTCTTTTTATTTCACGATaGCCATGTGGAAAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQALFISR*PCGKVG
Trigger: CCCAACTTTTCCACATGGTCATCGTGAAATAAAAAG...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTCCTGACCAGCGGAATTaGATTCCATACTTGACTCCA +
Preference number: 4 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFPDQRN*IPYLTP
Trigger: TGGAGTCAAGTATGGAATTCAATTCCGCTGGTCAGG...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTGTTCTGGCTTGCCTTTaGGCTAAGTCAGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVVLACL*AKSAGR
Trigger: CCTGCCTGCTGACTTAGCTCAAAGGCAAGCCAGAAC...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTGCCACAAAGAGTGAAAGGAGACTCTaGCAGTGCAGTGCAGATACC +
Preference number: 4 (lower is better)
Translates to: HTAAKRHFLNTTTSGATKSERRL*QCSADT
Trigger: GGTATCTGCACTGCACTGTCAGAGTCTCCTTTCACT...CTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGTAGAGGGGCTTCCATaGGTGGAAGAGGTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVVEGLP*VEEVER
Trigger: CCTCTCTACCTCTTCCACTCATGGAAGCCCCTCTAC...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GCACATACCCAAATACCACCCTGCGTTAAGGACCAGAAGTTTTCTAAGATGAAAGAGGCGGCTCTGCCATaGGCTGCTGTGTGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: AHTQIPPCVKDQKFSKMKEAALP*AAVCCP
Trigger: AGGGCAGCACACAGCAGCTCATGGCAGAGCCGCCTC...TTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTATTCTGTGTTTCAGTCTaGGGAGCTAATGGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLFCVSV*GANGKN
Trigger: ATTCTTGCCATTAGCTCCTCAGACTGAAACACAGAA...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439151.7
CDS-3UTR GCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTGATCAGAACAAATCCTaGAGGGCCACCATGGGCGTC +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVDQNKS*RATMGV
Trigger: GACGCCCATGGTGGCCCTGCAGGATTTGTTCTGATC...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CTCAGAAGGATCTCCAAAAGCCTCCACGTAGTACTGCCGATAGGGCCTCCGGTTTTCAAACATGACGATTaGTTTTCCAGCCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: LRRISKSLHVVLPIGPPVFKHDD*FSSHPG
Trigger: GCCTGGGTGGCTGGAAAAGCAATCGTCATGTTTGAA...AACCGGAGGCCCTATCGGCAGTACTACGTGGAGGCTTTTGGAGATCCTTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR GCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGCGTTCTCGGTCTCCCTaGAGTACAGCATCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGRSRSP*STASRV
Trigger: GACTCTTGATGCTGTACTGCAGGGAGACCGAGAACG...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTGCCCTCAATGGTCATCCCGCCCCTCCTaGACAGGGTCACTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: TDLKEHHFLPRVPRCPQWSSRPS*TGSLGS
Trigger: ACTTCCTAGTGACCCTGTGCAGGAGGGGCGGGATGA...CCATTGAGGGCACCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCGGAAGCCCTTGTTCTaGATAACAGTGGGTGGGTAC +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGRKPLF*ITVGGY
Trigger: GTACCCACCCACTGTTATGCAGAACAAGGGCTTCCG...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGTCATTGGCGTGGTATaGCACAGGACAGCGGACACA +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVVIGVV*HRTADT
Trigger: TGTGTCCGCTGTCCTGTGGCATACCACGCCAATGAC...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGTTCCTCAAACCTTGCTaGAGCTTCCTGAAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWFLKPC*SFLKSF
Trigger: AAAGCTCTTCAGGAAGCTGCAGCAAGGTTTGAGGAA...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGAACCCCGCTGTAATGTaGGGAAAATTTCAACCTCTG +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWNPAVM*GKFQPL
Trigger: CAGAGGTTGAAATTTTCCGCACATTACAGCGGGGTT...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTCACCCAAGAAGCCACTaGAGTTCGGGGCTCCACATT +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVHPRSH*SSGLHI
Trigger: AATGTGGAGCCCCGAACTGCAGTGGCTTCTTGGGTG...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGCAGATTGAGACAGTCTaGGTGGTAAACTTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWQIETV*VVNFWA
Trigger: TGCCCAAAAGTTTACCACGCAGACTGTCTCAATCTG...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCGTCCACAGGCCTCAGTaGTTTTTCTTTAGCTACAAG +
Preference number: 4 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLVHRPQ*FFFSYK
Trigger: CTTGTAGCTAAAGAAAAAGCACTGAGGCCTGTGGAC...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTACAGCTCTCGGCATATaGCCCAGACCTTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGTALGI*PRPLLA
Trigger: TGCCAGCAAAGGTCTGGGGCATATGCCGAGAGCTGT...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAGGGCCCAGGGACTTTaGTCTGTGGTTACCAACTTC +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFRAQGL*SVVTNF
Trigger: GAAGTTGGTAACCACAGAGCAAAGTCCCTGGGCCCT...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAGACCAGCAAGTCTGTaGCAATGTCTGTGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFRPASL*QCLCAP
Trigger: GGGAGCACACAGACATTGGCACAGACTTGCTGGTCT...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGAGACCAGCAAGTCTGTaGCAATGTCTGTGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGRPASL*QCLCAP
Trigger: GGGAGCACACAGACATTGGCACAGACTTGCTGGTCT...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GATATAGGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGGAGAAGCTTGCCAAATaGCTTCTTCCACTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: DIGSLPPLDCTGPLQGWVEKLAK*LLPLLE
Trigger: TTCCAGCAGTGGAAGAAGGCATTTGGCAAGCTTCTC...CACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGGAGAAGCTTGCCAAATaGCTTCTTCCACTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWEKLAK*LLPLLE
Trigger: TTCCAGCAGTGGAAGAAGGCATTTGGCAAGCTTCTC...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTGTGAGACATCTAGACTaGTGTCAAGTTGATTACCTA +
Preference number: 4 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQAVRHLD*CQVDYL
Trigger: TAGGTAATCAACTTGACAGCAGTCTAGATGTCTCAC...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTGGCTCTGCCATGAGCTaGTGTGTGCTGCCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPGSAMS*CVLPSP
Trigger: TGGGGAGGGCAGCACACAGCAGCTCATGGCAGAGCC...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGGGGCTGCTTTTTCATTaGTGCCGTCCACTTCATTTC +
Preference number: 4 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWGLLFH*CRPLHF
Trigger: GAAATGAAGTGGACGGCAGCAATGAAAAAGCAGCCC...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000439151.7
CDS-3UTR CCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTGATAGGGCCTCCGGTTaGAAACTTTCATTTTTGAAT +
Preference number: 4 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQADRASG*KLSFLN
Trigger: ATTCAAAAATGAAAGTTTCCAACCGGAGGCCCTATC...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTAAACAGAAAACTTCCTaGGGCAGTGTTGGACCCTGT +
Preference number: 4 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFKQKTS*GSVGPC
Trigger: ACAGGGTCCAACACTGCCCCAGGAAGTTTTCTGTTT...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGCTCCTCATTTATAACTaGGGGTTCTGCCATAACTGG +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWLLIYN*GFCHNW
Trigger: CCAGTTATGGCAGAACCCCCAGTTATAAATGAGGAG...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGTACAGAGTCCAGCTCTaGGCCTTTTCCGTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWYRVQL*AFSVFK
Trigger: TTTGAAAACGGAAAAGGCCCAGAGCTGGACTCTGTA...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGTTTAGTGCGCCTTTaGTTTAAACGCTGCCACCGC +
Preference number: 4 (lower is better)
Translates to: PCGKVGGKRPKSVCLLGWGLVRL*FKRCHR
Trigger: GCGGTGGCAGCGTTTAAACCAAAGGCGCACTAAACC...CCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGAGGAGTTCTATGCTCTaGAAACTCATCCCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGRSSML*KLIPPL
Trigger: GAGGGGCGGGATGAGTTTCCAGAGCATAGAACTCCT...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTCCTGTGGTGTCAAACTaGGAATTCCTGGCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFPVVSN*EFLAPF
Trigger: AAAAGGAGCCAGGAATTCCCAGTTTGACACCACAGG...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGAGGGAGCTCAGCCTGTaGTGTCAAACTGGGAATTCC +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGRELSL*CQTGNS
Trigger: GGAATTCCCAGTTTGACACCACAGGCTGAGCTCCCT...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGTCTCCTTGGGGCTTGTaGCCGTCCTGTGAGGCATTA +
Preference number: 4 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLSPWGL*PSCEAL
Trigger: TAATGCCTCACAGGACGGCCACAAGCCCCAAGGAGA...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTGCCCTCAATGGCCTCAACAGTCTCCTTaGGGCTTGTGGCCGTCCTGT +
Preference number: 4 (lower is better)
Translates to: TDLKEHHFLPRVPRCPQWPQQSP*GLWPSC
Trigger: ACAGGACGGCCACAAGCCCCAAGGAGACTGTTGAGG...CCATTGAGGGCACCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTCATACAAAACAGGTATaGATTCCTGTGCGACATTCA +
Preference number: 4 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQAHTKQV*IPVRHS
Trigger: TGAATGTCGCACAGGAATCCATACCTGTTTTGTATG...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTCAGGTTATACAGATGTaGAGGGAGCACCGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVQVIQM*REHRKP
Trigger: GGGCTTCCGGTGCTCCCTCCACATCTGTATAACCTG...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAGGTTATACAGATGTaGAGGGAGCACCGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVQVIQM*REHRKP
Trigger: GGGCTTCCGGTGCTCCCTCCACATCTGTATAACCTG...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGCCAGGCAAAAGTCATTaGCGTGGTATGCCACAGGAC +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGPGKSH*RGMPQD
Trigger: GTCCTGTGGCATACCACGCCAATGACTTTTGCCTGG...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTCCAGGCAAAAGTCATTaGCGTGGTATGCCACAGGAC +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGPGKSH*RGMPQD
Trigger: GTCCTGTGGCATACCACGCCAATGACTTTTGCCTGG...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTATGGCAGATCTCAGCTaGCCACCACCTGTATCGTCC +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVMADLS*PPPVSS
Trigger: GGACGATACAGGTGGTGGCCAGCTGAGATCTGCCAT...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGTCAACCTCTGGATATTaGCGCTTGGAAAAGCACTGG +
Preference number: 4 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWSTSGY*RLEKHW
Trigger: CCAGTGCTTTTCCAAGCGCCAATATCCAGAGGTTGA...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGTCTGTGTTTCACAGTTaGGCTGGCAGCAATGATTCA +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWSVFHS*AGSNDS
Trigger: TGAATCATTGCTGCCAGCCCAACTGTGAAACACAGA...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCAATGGGTTGATTCTTTaGCCTTACACCCAAGAAGCC +
Preference number: 4 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLNGLIL*PYTQEA
Trigger: GGCTTCTTGGGTGTAAGGCCAAAGAATCAACCCATT...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTTTGCAGGAGACGAGCTaGCCAGCATCCCCACAACTA +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVLQETS*PASPQL
Trigger: TAGTTGTGGGGATGCTGGCCAGCTCGTCTCCTGCAA...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTGCCACAAAGGCGACAGCATCTGGTTaGTGTCAGCAGGAGGTTTAT +
Preference number: 4 (lower is better)
Translates to: HTAAKRHFLNTTTSGATKATASG*CQQEVY
Trigger: ATAAACCTCCTGCTGACACCAACCAGATGCTGTCGC...CTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTGAGAGCGACAGCATCTaGTTGGTGTCAGCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGESDSI*LVSAGG
Trigger: ACCTCCTGCTGACACCAACCAGATGCTGTCGCTCTC...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCCTAAAGGCTGGGGCCTaGAGTCAGTTCTCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFLKAGA*SQFSQE
Trigger: CTCTTGAGAGAACTGACTCCAGGCCCCAGCCTTTAG...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCTAAAGGCTGGGGCCTaGAGTCAGTTCTCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGLKAGA*SQFSQE
Trigger: CTCTTGAGAGAACTGACTCCAGGCCCCAGCCTTTAG...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCACCAAGGATTGGGATTTaGTCCCTGACCCAGCGAGGT +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSPRIGI*SLTQRG
Trigger: ACCTCGCTGGGTCAGGGACCAAATCCCAATCCTTGG...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTCCAAGGATTGGGATTTaGTCCCTGACCCAGCGAGGT +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVPRIGI*SLTQRG
Trigger: ACCTCGCTGGGTCAGGGACCAAATCCCAATCCTTGG...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTGCCACAAAGCTGGAAACCAAGGATTaGGATTTGGTCCCTGACCCA +
Preference number: 4 (lower is better)
Translates to: HTAAKRHFLNTTTSGATKLETKD*DLVPDP
Trigger: TGGGTCAGGGACCAAATCCCAATCCTTGGTTTCCAG...CTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTTGGTCCTGCCACTGCTaGTGGCCTGTCCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPWSCHC*WPVQWP
Trigger: AGGCCACTGGACAGGCCACCAGCAGTGGCAGGACCA...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTGGTCTTTCCAGTGGTTaGGACCTGACTGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVGLSSG*DLTEGE
Trigger: CTCACCCTCAGTCAGGTCCCAACCACTGGAAAGACC...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGGGTCTTTCCAGTGGTTaGGACCTGACTGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWGLSSG*DLTEGE
Trigger: CTCACCCTCAGTCAGGTCCCAACCACTGGAAAGACC...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGACTGGGGCCTTGGGCTaGCAGCACCTATGGATTTAT +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGTGALG*QHLWIY
Trigger: ATAAATCCATAGGTGCTGCCAGCCCAAGGCCCCAGT...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGACTGGGGCCTTGGGCTaGCAGCACCTATGGATTTAT +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWTGALG*QHLWIY
Trigger: ATAAATCCATAGGTGCTGCCAGCCCAAGGCCCCAGT...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGGCCTGTCTGAAGTCTaGGGTTTGGGACTGCTAGTA +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGGLSEV*GLGLLV
Trigger: TACTAGCAGTCCCAAACCCCAGACTTCAGACAGGCC...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGTTAGCTACAAGGGTCTaGACCACAGCTGATAGTACT +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWLATRV*TTADST
Trigger: AGTACTATCAGCTGTGGTCCAGACCCTTGTAGCTAA...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTGCCCTCAATGGGCTGCCCGCTCCTTCTaGCGAGGAGTTAGGTCTATG +
Preference number: 4 (lower is better)
Translates to: TDLKEHHFLPRVPRCPQWAARSF*RGVRSM
Trigger: CATAGACCTAACTCCTCGCCAGAAGGAGCGGGCAGC...CCATTGAGGGCACCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGCCCCAGACCTTTGCTaGCAGGCCATGAACTTGACT +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVAPDLC*QAMNLT
Trigger: AGTCAAGTTCATGGCCTGCCAGCAAAGGTCTGGGGC...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGCCCCAGACCTTTGCTaGCAGGCCATGAACTTGACT +
Preference number: 4 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLAPDLC*QAMNLT
Trigger: AGTCAAGTTCATGGCCTGCCAGCAAAGGTCTGGGGC...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCGAAAGAAGTCTGGCCTaGGTGAGTGATTTAACAGCT +
Preference number: 4 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLERSLA*VSDLTA
Trigger: AGCTGTTAAATCACTCACCCAGGCCAGACTTCTTTC...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTACATATAAAAAGGCCTTaGCAGGAGGCTGAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLHIKRP*QEAEKE
Trigger: TTCTTTCTCAGCCTCCTGCCAAGGCCTTTTTATATG...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTAGTGCAGGTAGTTGCTaGCCTCCGACCATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGSAGSC*PPTICF
Trigger: GAAGCAGATGGTCGGAGGCCAGCAACTACCTGCACT...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGTATTTTGCTCTGGTTTaGGGTCTTGCCCTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWYFALV*GLALFQ
Trigger: TTGGAAGAGGGCAAGACCCCAAACCAGAGCAAAATA...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGAGCCTGGTTAAGAGCTaGAAGTGTATTTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWSLVKS*KCILLW
Trigger: CCAGAGCAAAATACACTTCCAGCTCTTAACCAGGCT...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTCCCCAAATGGTACCCTaGGGGCAGCTTGTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGPQMVP*GQLVCS
Trigger: TGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGG...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGGTCTGTCTGTCTCCTTaGTTGGGGCCCACTGGATTT +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGVCLSP*LGPTGF
Trigger: AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGAC...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAAGCCAACAGCCTTGCTaGCCTCAATGCAGCACCCTT +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSSQQPC*PQCSTL
Trigger: AAGGGTGCTGCATTGAGGCCAGCAAGGCTGTTGGCT...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TGTCCTGTGAGACATCTAGACTGCTGTCAAGTTGATTACCTACCAAAGCCTACTAGATTTCCCAGCCCTTaGGCCCCAGCTCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: CPVRHLDCCQVDYLPKPTRFPSP*APAQGS
Trigger: GCTGCCCTGAGCTGGGGCCCAAGGGCTGGGAAATCT...AGTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCTAGATGTCTCACAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGAACAGCACTTCCTGTTaGCAGTCTGTGAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGNSTSC*QSVSWV
Trigger: CACCCAGCTCACAGACTGCCAACAGGAAGTGCTGTT...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAAAGCAGCCAATCATaGCCCCTTTCCCTCACTCCC +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVQSSQS*PLSLTP
Trigger: GGGAGTGAGGGAAAGGGGCCATGATTGGCTGCTTTG...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGCCTCATTACTCCCTATaGGGGAATCTGTCAGGACTA +
Preference number: 4 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWPHYSL*GNLSGL
Trigger: TAGTCCTGACAGATTCCCCCATAGGGAGTAATGAGG...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTGCCCTCAATGGACCTCTGGATTGCACTaGGCCACTCCAGGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: TDLKEHHFLPRVPRCPQWTSGLH*ATPGLG
Trigger: ACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGT...CCATTGAGGGCACCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AGATGTATTGGCTTTCTAGCTACCCATGGAGAATTTCAACTTTTGCCTTGTCCCCGTGGACGGAGGCTATaGACAAGGTGGCCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: RCIGFLATHGEFQLLPCPRGRRL*TRWPQP
Trigger: GGGCTGGGGCCACCTTGTCCATAGCCTCCGTCCACG...GGGACAAGGCAAAAGTTGAAATTCTCCATGGGTAGCTAGAAAGCCAATACATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAGCAGAGCTTCACTTTTaGACCACACACCAGGCTTCG +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSAELHF*TTHQAS
Trigger: CGAAGCCTGGTGTGTGGTTCAAAAGTGAAGCTCTGC...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTACTGTTATCAGACTCTaGGCTGTGTTCTATGGGATC +
Preference number: 4 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFTVIRL*AVFYGI
Trigger: GATCCCATAGAACACAGCTCAGAGTCTGATAACAGT...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTTCAGAGAGATTAACCTaGGACGTCTCGGTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGSERLT*DVSVPG
Trigger: GCCTGGAACCGAGACGTCTCAGGTTAATCTCTCTGA...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGTCAGAGAGATTAACCTaGGACGTCTCGGTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWSERLT*DVSVPG
Trigger: GCCTGGAACCGAGACGTCTCAGGTTAATCTCTCTGA...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGGTGTGTGGAGCCTCCTaGAACCAAAACCTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGVCGAS*NQNLRD
Trigger: GTCTCTAAGGTTTTGGTTTCAGGAGGCTCCACACAC...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTAGAGCAGCATGCGGTTaGTGCATTCAGAGTCTATCC +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGRAACG*CIQSLS
Trigger: GGATAGACTCTGAATGCATCAACCGCATGCTGCTCT...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGTCGCTTGGTCAGATTaGGACAGTCTGCGTGGTAAA +
Preference number: 4 (lower is better)
Translates to: PCGKVGGKRPKSVCLLGWVAWSD*DSLRGK
Trigger: TTTACCACGCAGACTGTCTCAATCTGACCAAGCGAC...CCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CAGGAAATCGCCACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGCCGCAGATGTCACACTaGTGCCACGGACATTCCCAT +
Preference number: 4 (lower is better)
Translates to: QEIATDLKEHHFLPRVPRPQMSH*CHGHSH
Trigger: ATGGGAATGTCCGTGGCATCAGTGTGACATCTGCGG...CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGGATTGCTCTGCCAGGTaGGTGCTTGGCCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVDCSAR*VLGPGG
Trigger: GCCTCCAGGGCCAAGCACTCACCTGGCAGAGCAATC...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGACATTTTGGGTGCCTaGGCAGCCATTCCTGTTGAT +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGDILGA*AAIPVD
Trigger: ATCAACAGGAATGGCTGCTCAGGCACCCAAAATGTC...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGAGCAGGAGGTTTATCTaGCATTTTGGGTGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWSRRFI*HFGCLS
Trigger: GCTCAGGCACCCAAAATGTCAGATAAACCTCCTGCT...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTGCCCTCAATGGACCCAGCGAGGTCTCTaGCCTTATCTAAAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TDLKEHHFLPRVPRCPQWTQRGL*PYLKAG
Trigger: CCCAGCCTTTAGATAAGGTCAGAGACCTCGCTGGGT...CCATTGAGGGCACCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTGCCCTCAATGGCATCAGCCTGTGGTGTaGCCTGATGAGGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: TDLKEHHFLPRVPRCPQWHQPVV*PDEVKL
Trigger: CAGCTTCACCTCATCAGGTCACACCACAGGCTGATG...CCATTGAGGGCACCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGGATTCTGCACACTTGTaGCTGGAAGGAGCCTGGTTA +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGDSAHL*LEGAWL
Trigger: TAACCAGGCTCCTTCCAGTCACAAGTGTGCAGAATC...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGGATTCTGCACACTTGTaGCTGGAAGGAGCCTGGTTA +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWDSAHL*LEGAWL
Trigger: TAACCAGGCTCCTTCCAGTCACAAGTGTGCAGAATC...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGTTGGGGAAATCGCTTTaGGAGCCCCTATACCTTCCA +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGLGKSL*EPLYLP
Trigger: TGGAAGGTATAGGGGCTCTCAAAGCGATTTCCCCAA...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTGCCCTCAATGGCACTGCCCGAGGCTCTaGAATCTGAAAGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: TDLKEHHFLPRVPRCPQWHCPRL*NLKAPE
Trigger: CTCAGGTGCTTTCAGATTTCAGAGCCTCGGGCAGTG...CCATTGAGGGCACCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTACCTCAATAAGAACTTaGGGAAATTGGGACCAAATA +
Preference number: 4 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQATSIRT*GNWDQI
Trigger: TATTTGGTCCCAATTTCCTCAAGTTCTTATTGAGGT...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GATATAGGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGGTCCATCCATTCAGATaGAGAACTGCTCCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: DIGSLPPLDCTGPLQGWVVHPFR*RTAPQN
Trigger: ATTTTGGGGAGCAGTTCTTCATCTGAATGGATGGAC...CACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGCAAGGCAAACACTCTTaGGATCTCAATTTCCAAGCA +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWQGKHS*DLNFQA
Trigger: TGCTTGGAAATTGAGATCTCAAGAGTGTTTGCCTTG...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCTCTGCCATGATCTaGGAGAGGTTAGGACACTGG +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWFSAMI*ERLGHW
Trigger: CCAGTGTCCTAACCTCTCTCAGATCATGGCAGAGAA...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCTGGTCAAAGGTTCCTGAAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGCAACTACCAAGCAGTaGCTTGGAATGTCTACACAT +
Preference number: 4 (lower is better)
Translates to: PGQRFLKALESRLTGMRPATTKQ*LGMSTH
Trigger: ATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGC...AGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTTCAGGAACCTTTGACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTGGGGCAGAAGGGAGCTaGGGAAGACCCAACAACCAG +
Preference number: 4 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPGAEGS*GRPNNQ
Trigger: CTGGTTGTTGGGTCTTCCTCAGCTCCCTTCTGCCCC...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGAGTTTCACTTACAGCTaGCAATCTATGGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWSFTYS*QSMGAG
Trigger: CCCCGCCCCCATAGATTGTCAGCTGTAAGTGAAACT...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGCAAGAATGGCGATTTaGCTGCACCGTGTCTACTCT +
Preference number: 4 (lower is better)
Translates to: PCGKVGGKRPKSVCLLGWARMAI*LHRVYS
Trigger: AGAGTAGACACGGTGCAGTCAAATCGCCATTCTTGC...CCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439151.7
CDS-3UTR GCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCACGTTCTCGGTCTCCCTaGAGTACAGCATCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSRSRSP*STASRV
Trigger: GACTCTTGATGCTGTACTGCAGGGAGACCGAGAACG...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGGCTGAAGGAGTTCTATaGTCTGGAAACTCATCCCGC +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGAEGVL*SGNSSR
Trigger: GCGGGATGAGTTTCCAGAGCATAGAACTCCTTCAGC...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGTTTCCATGTCACCAATaGTGGCACTGGATTTATCAC +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWFPCHQ*WHWIYH
Trigger: GTGATAAATCCAGTGCCAGCATTGGTGACATGGAAA...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTCGGGAACTTACCTTGTaGACCTGCTCCTGTACCTTC +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGRELTL*TCSCTF
Trigger: GAAGGTACAGGAGCAGGTGCACAAGGTAAGTTCCCG...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTCACAAGATTCAGTTATaGCATTCTCCAGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFHKIQL*HSPGDQ
Trigger: CTGGTCACCTGGAGAATGGCATAACTGAATCTTGTG...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGATCTTGGCTGCAGCATaGCTCTGTCGTTTTCGCTTC +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWILAAA*LCRFRF
Trigger: GAAGCGAAAACGACAGAGGCATGCTGCAGCCAAGAT...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTACACTGCATCTTGGCTaGAGCATGCCTCTGTCGTTT +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGTLHLG*SMPLSF
Trigger: AAACGACAGAGGCATGCTGCAGCCAAGATGCAGTGT...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCACGGAAGCCCTTGTTCTaGATAACAGTGGGTGGGTAC +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSRKPLF*ITVGGY
Trigger: GTACCCACCCACTGTTATGCAGAACAAGGGCTTCCG...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCATCTTATCCTTGCTaGTCACGTCACCCTCCATGT +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGPSYPC*SRHPPC
Trigger: ACATGGAGGGTGACGTGAGCAGCAAGGATAAGATGG...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTTGCCCATCTTATCCTTaGTGCTCACGTCACCCTCCA +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVCPSYP*CSRHPP
Trigger: TGGAGGGTGACGTGAGCAGCAAGGATAAGATGGGCA...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGTCCCATCCACTCCTTTaGCCATCTTATCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: PCGKVGGKRPKSVCLLGWSHPLL*PSYPCC
Trigger: GCAGCAAGGATAAGATGGGCAAAGGAGTGGATGGGA...CCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTAACCCCGCTGTAATGTaGGGAAAATTTCAACCTCTG +
Preference number: 4 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFNPAVM*GKFQPL
Trigger: CAGAGGTTGAAATTTTCCGCACATTACAGCGGGGTT...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTTTTCACCCTGGGTCCTaGGCTTTCCCTGTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGFHPGS*AFPVAS
Trigger: AGAAGCAACAGGGAAAGCGCAGGACCCAGGGTGAAA...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCATTTCACCCTGGGTCCTaGGCTTTCCCTGTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSFHPGS*AFPVAS
Trigger: AGAAGCAACAGGGAAAGCGCAGGACCCAGGGTGAAA...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGATCCCTTCTCGATGCTaGTTACAAAAGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWIPSRC*LQKELG
Trigger: CCCCAGCTCCTTTTGTAAGCAGCATCGAGAAGGGAT...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACATCCCTTCTCGATGCTaGTTACAAAAGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: KALESRLTGMRPVSLISDIPSRC*LQKELG
Trigger: CCCCAGCTCCTTTTGTAAGCAGCATCGAGAAGGGAT...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTTATGCCCCAGACCTTTaGTGGCAGGCCATGAACTTG +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVYAPDL*WQAMNL
Trigger: CAAGTTCATGGCCTGCCAGCAAAGGTCTGGGGCATA...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CAGGAAATCGCCACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGGTGCCAATGTCTGTGTaGTCCCAGCAGACCAGCAAG +
Preference number: 4 (lower is better)
Translates to: QEIATDLKEHHFLPRVPRVPMSV*SQQTSK
Trigger: CTTGCTGGTCTGCTGGGAGCACACAGACATTGGCAC...CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCCACAACCACTTCTGGTaGCACAAAGGACATTTCAAA +
Preference number: 4 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLHNHFW*HKGHFK
Trigger: TTTGAAATGTCCTTTGTGGCACCAGAAGTGGTTGTG...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTGCCACAAAGTCAATGCAGCACCCTTaGATCTATAGAGGAGACCTC +
Preference number: 4 (lower is better)
Translates to: HTAAKRHFLNTTTSGATKSMQHP*IYRGDL
Trigger: GAGGTCTCCTCTATAGATGCAAGGGTGCTGCATTGA...CTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCCCTTGCTGGCCTCAATaGAGCACCCTTGCATCTATA +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFPCWPQ*STLASI
Trigger: TATAGATGCAAGGGTGCTGCATTGAGGCCAGCAAGG...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGGGGCCGGGGATGGCCTaGTGGCTAAGTTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVGPGMA*WLSWQS
Trigger: GCTTTGCCAACTTAGCCAGCAGGCCATCCCCGGCCC...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACGAGGTCTCAGTGAAATaGAGGGATAGGCCCCTAAAC +
Preference number: 4 (lower is better)
Translates to: KALESRLTGMRPVSLISDEVSVK*RDRPLN
Trigger: GTTTAGGGGCCTATCCCTGCATTTCACTGAGACCTC...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAACAGGGTGTTTCATaGCCTGACCATAGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVQQGVS*PDHSVG
Trigger: CCCCACACTATGGTCAGGGCATGAAACACCCTGTTG...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCCCTATCCAAGTTTCATaGTGTCCTCATTACTCCCTA +
Preference number: 4 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLPIQVS*CPHYSL
Trigger: TAGGGAGTAATGAGGACAGCATGAAACTTGGATAGG...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTAGGCAGCTCCTTCTCTaGCATGATCTGAGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGRQLLL*HDLREV
Trigger: AACCTCTCTCAGATCATGGCAGAGAAGGAGCTGCCT...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTCCTAGGAGGCGGCTCTaGCATGAGCTGCTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPPRRRL*HELLCA
Trigger: AGCACACAGCAGCTCATGGCAGAGCCGCCTCCTAGG...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTGCCACAAAGCACACCAGGCTTCGTTaGGGTTTATTCTTCTCTCGA +
Preference number: 4 (lower is better)
Translates to: HTAAKRHFLNTTTSGATKHTRLR*GLFFSR
Trigger: TCGAGAGAAGAATAAACCCCAACGAAGCCTGGTGTG...CTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGCTGAGCTGTGTTCTATaGGATCCAGGTCACTGCTTC +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGLSCVL*DPGHCF
Trigger: GAAGCAGTGACCTGGATCCCATAGAACACAGCTCAG...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTGTACAACCCATTAAGTaGTCTGTATGTGAGTTACTA +
Preference number: 4 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQAVQPIK*SVCELL
Trigger: TAGTAACTCACATACAGACCACTTAATGGGTTGTAC...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GATATAGGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCCAAAGGAGAGCCTTTaGTATCAGAAGAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: DIGSLPPLDCTGPLQGWVPKESL*YQKSSI
Trigger: AATGCTGCTCTTCTGATACCAAAGGCTCTCCTTTGG...CACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGTCTCTGAATTGTGTGTaGAGCCTCCTGAAACCAAAA +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWSLNCV*SLLKPK
Trigger: TTTTGGTTTCAGGAGGCTCCACACACAATTCAGAGA...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTAGGAGTTCTATGCTCTaGAAACTCATCCCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVRSSML*KLIPPL
Trigger: GAGGGGCGGGATGAGTTTCCAGAGCATAGAACTCCT...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAAGGGAGCTCAGCCTGTaGTGTCAAACTGGGAATTCC +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSRELSL*CQTGNS
Trigger: GGAATTCCCAGTTTGACACCACAGGCTGAGCTCCCT...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGAGGGAGCTCAGCCTGTaGTGTCAAACTGGGAATTCC +
Preference number: 4 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLRELSL*CQTGNS
Trigger: GGAATTCCCAGTTTGACACCACAGGCTGAGCTCCCT...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTCAAAAGCCACTTGCTTaGCTTCCTAAGGCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFQKPLA*LPKAFL
Trigger: AAGAAACGCCTTAGGAAGCCAAGCAAGTGGCTTTTG...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGACTCAAGGGCAGGCCGTaGAGAGACTTCCGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRLKGRP*RDFRSH
Trigger: GTGGCTCCGGAAGTCTCTCCACGGCCTGCCCTTGAG...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGCTGCATAACAGTGGGTaGGTACTTCTGGACACACTC +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWLHNSG*VLLDTL
Trigger: GAGTGTGTCCAGAAGTACCCACCCACTGTTATGCAG...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGCTGCATAACAGTGGGTaGGTACTTCTGGACACACTC +
Preference number: 4 (lower is better)
Translates to: PCGKVGGKRPKSVCLLGWLHNSG*VLLDTL
Trigger: GAGTGTGTCCAGAAGTACCCACCCACTGTTATGCAG...CCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTTGCAGAAACATTGGCTaGATTAGCAGCATGACAGGT +
Preference number: 4 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFCRNIG*ISSMTG
Trigger: ACCTGTCATGCTGCTAATCCAGCCAATGTTTCTGCA...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAAAAGTCATTGGCGTaGTATGCCACAGGACAGCGG +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVQKSLA*YATGQR
Trigger: CCGCTGTCCTGTGGCATACCACGCCAATGACTTTTG...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTAATGGGTTGATTCTTTaGCCTTACACCCAAGAAGCC +
Preference number: 4 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFNGLIL*PYTQEA
Trigger: GGCTTCTTGGGTGTAAGGCCAAAGAATCAACCCATT...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGTTCCCATTTCCCTGCTaGTCGCTTGGTCAGATTGAG +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGFPFPC*SLGQIE
Trigger: CTCAATCTGACCAAGCGACCAGCAGGGAAATGGGAA...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTGTTTATCTGACATTTTaGGTGCCTGAGCAGCCATTC +
Preference number: 4 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFVYLTF*VPEQPF
Trigger: GAATGGCTGCTCAGGCACCCAAAATGTCAGATAAAC...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGCTGGAAACCAAGGATTaGGATTTGGTCCCTGACCCA +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGLETKD*DLVPDP
Trigger: TGGGTCAGGGACCAAATCCCAATCCTTGGTTTCCAG...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GCACATACCCAAATACCACCCTGCGTTAAGGACCAGAAGTTTTCTAAGATGAAATGGTCCTGCCACTGCTaGTGGCCTGTCCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: AHTQIPPCVKDQKFSKMKWSCHC*WPVQWP
Trigger: AGGCCACTGGACAGGCCACCAGCAGTGGCAGGACCA...TTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGGGCCTGTCTGAAGTCTaGGGTTTGGGACTGCTAGTA +
Preference number: 4 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWGLSEV*GLGLLV
Trigger: TACTAGCAGTCCCAAACCCCAGACTTCAGACAGGCC...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTTGGGACAAAGAGGCATaGGGTTTGTCAGTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVWDKEA*GLSVGL
Trigger: CAGGCCTACTGACAAACCCCATGCCTCTTTGTCCCA...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTGCCCTCAATGGGCCCCAGACCTTTGCTaGCAGGCCATGAACTTGACT +
Preference number: 4 (lower is better)
Translates to: TDLKEHHFLPRVPRCPQWAPDLC*QAMNLT
Trigger: AGTCAAGTTCATGGCCTGCCAGCAAAGGTCTGGGGC...CCATTGAGGGCACCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGACCAGGCCCGGGGATTaGCTAAGAGGCCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKTRPGD*LRGPGV
Trigger: GACCCCAGGGCCTCTTAGCCAATCCCCGGGCCTGGT...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGAAGATTGCCCACTCTTaGCGGCAAGTGCAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGKIAHS*RQVQVV
Trigger: AACTACCTGCACTTGCCGCCAAGAGTGGGCAATCTT...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGTATTTTGCTCTGGTTTaGGGTCTTGCCCTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWYFALV*GLALFQ
Trigger: TTGGAAGAGGGCAAGACCCCAAACCAGAGCAAAATA...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGTCTGTCTGTCTCCTTaGTTGGGGCCCACTGGATTT +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVVCLSP*LGPTGF
Trigger: AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGAC...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTGTCTGTCTGTCTCCTTaGTTGGGGCCCACTGGATTT +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVVCLSP*LGPTGF
Trigger: AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGAC...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CAGGAAATCGCCACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGGGGGCTCTGTCTGGTTaGGGAAATCGCTTTGAGAGC +
Preference number: 4 (lower is better)
Translates to: QEIATDLKEHHFLPRVPRGALSG*GNRFES
Trigger: GCTCTCAAAGCGATTTCCCCAACCAGACAGAGCCCC...CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GCACATACCCAAATACCACCCTGCGTTAAGGACCAGAAGTTTTCTAAGATGAAAAGATTTCCCAGCCCTTaGGCCCCAGCTCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: AHTQIPPCVKDQKFSKMKRFPSP*APAQGS
Trigger: GCTGCCCTGAGCTGGGGCCCAAGGGCTGGGAAATCT...TTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGGGAGGGGTAGACAAGTaGGAGGAAACTAGCCAAACA +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWGGVDK*EETSQT
Trigger: TGTTTGGCTAGTTTCCTCCCACTTGTCTACCCCTCC...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACAAAAGGGCACAGGACTaGCACCAAGCAAACCCTACT +
Preference number: 4 (lower is better)
Translates to: KALESRLTGMRPVSLISDKRAQD*HQANPT
Trigger: AGTAGGGTTTGCTTGGTGCCAGTCCTGTGCCCTTTT...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTAATTTTGCTATTAGACTaGGTTGGCTCCAGCAAGATA +
Preference number: 4 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLILLLD*VGSSKI
Trigger: TATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAAT...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCTACCAAGCAGTGACTTaGAATGTCTACACATGGAAC +
Preference number: 4 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLYQAVT*NVYTWN
Trigger: GTTCCATGTGTAGACATTCCAAGTCACTGCTTGGTA...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TTAGAAAGGCCAAGGTCCCCCTTCTTGGGCATAAATCCAGGGTCTAAATCATTGGAGCAAGACTCCACCTaGTTCAGGGAGCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LERPRSPFLGINPGSKSLEQDST*FRELSL
Trigger: CAGGCTGAGCTCCCTGAACCAGGTGGAGTCTTGCTC...CAATGATTTAGACCCTGGATTTATGCCCAAGAAGGGGGACCTTGGCCTTTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375350.3
CDS-3UTR TCA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCCTTCACTGTCCAACTTaGTTGAACCAGGAATACATT +
Preference number: 4 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLLHCPT*LNQEYI
Trigger: AATGTATTCCTGGTTCAATCAAGTTGGACAGTGAAG...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CACCCAGGCTCTCTCAGAAGGATCTCCAAAAGCCTCCACGTAGTACTGCCGATACAACAGGTCATGTTCTaGCTCAGGATCATTTGTGCA +
Preference number: 4 (lower is better)
Translates to: HPGSLRRISKSLHVVLPIQQVMF*LRIICA
Trigger: TGCACAAATGATCCTGAGTCAGAACATGACCTGTTG...TATCGGCAGTACTACGTGGAGGCTTTTGGAGATCCTTCTGAGAGAGCCTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR TCA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTAAGAATCAAAAGCCAGTaGTTTCAAACAGCCATTAAG +
Preference number: 4 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLRIKSQ*FQTAIK
Trigger: CTTAATGGCTGTTTGAAATCACTGGCTTTTGATTCT...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCTCTCGAGAACACTTTaGGATCAAAGCACCCTCAGG +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVLSRTL*DQSTLR
Trigger: CCTGAGGGTGCTTTGATCTCAAAGTGTTCTCGAGAG...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CACCCAGGCTCTCTCAGAAGGATCTCCAAAAGCCTCCACGTAGTACTGCCGATAACTGTTATCAGACTCTaGGCTGTGTTCTATGGGATC +
Preference number: 4 (lower is better)
Translates to: HPGSLRRISKSLHVVLPITVIRL*AVFYGI
Trigger: GATCCCATAGAACACAGCTCAGAGTCTGATAACAGT...TATCGGCAGTACTACGTGGAGGCTTTTGGAGATCCTTCTGAGAGAGCCTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638627.2
CDS-3UTR TCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGATGTTCCAGAGTCACTaGCATCCTCACCTAAGGATC +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGMFQSH*HPHLRI
Trigger: GATCCTTAGGTGAGGATGTCAGTGACTCTGGAACAT...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAGTGTGTGGAGCCTCCTaGAACCAAAACCTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSVCGAS*NQNLRD
Trigger: GTCTCTAAGGTTTTGGTTTCAGGAGGCTCCACACAC...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGATCTCCCTTTTTCTCTaGATTGTGTGTGGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGISLFL*IVCGAS
Trigger: GGAGGCTCCACACACAATTCAGAGAAAAAGGGAGAT...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTGCCACAAAGCCTAGTAACACAGTCTaGACGACTTTTACCAGAAGC +
Preference number: 4 (lower is better)
Translates to: HTAAKRHFLNTTTSGATKPSNTV*TTFTRS
Trigger: GCTTCTGGTAAAAGTCGTTCAGACTGTGTTACTAGG...CTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGCTCAAGTATGCTTGCTaGAGGAGTTCTATGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWLKYAC*RSSMLW
Trigger: CCAGAGCATAGAACTCCTTCAGCAAGCATACTTGAG...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCAGGCTCTTCTTTGGTTaGAATCAAAGAATTCTCGTC +
Preference number: 4 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLRLFFG*NQRILV
Trigger: GACGAGAATTCTTTGATTTCAACCAAAGAAGAGCCT...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GCACATACCCAAATACCACCCTGCGTTAAGGACCAGAAGTTTTCTAAGATGAAATCCACCTCCAAGTTCTaGCTGAGCCAAGGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: AHTQIPPCVKDQKFSKMKSTSKF*LSQGAL
Trigger: GAGGGCCCCTTGGCTCAGTCAGAACTTGGAGGTGGA...TTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCTGGTCAAAGGTTCCTGAAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGCCTGGAATCTCTTTTaGCGAGTCATCATTTTTCAC +
Preference number: 4 (lower is better)
Translates to: PGQRFLKALESRLTGMRPAWNLF*RVIIFH
Trigger: GTGAAAAATGATGACTCGTCAAAAGAGATTCCAGGC...AGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTTCAGGAACCTTTGACCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGGCTGGATTAGCAGCATaGCAGGTTATACAGATGTGG +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWAGLAA*QVIQMW
Trigger: CCACATCTGTATAACCTGTCATGCTGCTAATCCAGC...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGTTCAGGCATTCACGATaGAAAGCAGCAGGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: PCGKVGGKRPKSVCLLGWFRHSR*KAAGQE
Trigger: TTCTTGCCCTGCTGCTTTTCATCGTGAATGCCTGAA...CCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTCAGATAAGTCTGCAGTaGAGATCTGTACCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGQISLQ*RSVPCQ
Trigger: TTGGCAGGGTACAGATCTTCACTGCAGACTTATCTG...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTGAAAAGCACTGGTTTTaGCAGCGCCCTCCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPEKHWF*QRPPAG
Trigger: TCCTGCCGGAGGGCGCTGTCAAAACCAGTGCTTTTC...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTTGGGACCAGCATCAATaGTTCGGTCTTTGTCTAGGG +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVWDQHQ*FGLCLG
Trigger: CCCTAGACAAAGACCGAATCATTGATGCTGGTCCCA...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTGCCACAAAGGGCAGCAATGATTCATaGACCGAGCATAGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: HTAAKRHFLNTTTSGATKGSNDS*TEHSFL
Trigger: AAGGAAACTATGCTCGGTTCATGAATCATTGCTGCC...CTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTGTCGCTTGGTCAGATTaGGACAGTCTGCGTGGTAAA +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVVAWSD*DSLRGK
Trigger: TTTACCACGCAGACTGTCTCAATCTGACCAAGCGAC...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGGATTGCTCTGCCAGGTaGGTGCTTGGCCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKDCSAR*VLGPGG
Trigger: GCCTCCAGGGCCAAGCACTCACCTGGCAGAGCAATC...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGGAGGAGTTAGGTCTATaGGATCCATCACCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWEELGL*DPSPKQ
Trigger: CTGCTTTGGTGATGGATCTCATAGACCTAACTCCTC...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGGAGGAGTTAGGTCTATaGGATCCATCACCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGEELGL*DPSPKQ
Trigger: CTGCTTTGGTGATGGATCTCATAGACCTAACTCCTC...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGCTTTCCCAGATGTCTaGAGAGGATCTGACACACAG +
Preference number: 4 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLAFPDV*RGSDTQ
Trigger: CTGTGTGTCAGATCCTCTTCAGACATCTGGGAAAGC...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTGATTCTGCACACTTGTaGCTGGAAGGAGCCTGGTTA +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGDSAHL*LEGAWL
Trigger: TAACCAGGCTCCTTCCAGTCACAAGTGTGCAGAATC...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTGTACTACTTCTGTTCTaGTTCTGCACACTTGTGACT +
Preference number: 4 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFVLLLF*FCTLVT
Trigger: AGTCACAAGTGTGCAGAATCAGAACAGAAGTAGTAC...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCGCAGATACCTTTTTCTaGTCACAACTACAGATGACT +
Preference number: 4 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLADTFF*SQLQMT
Trigger: AGTCATCTGTAGTTGTGATCAGAAAAAGGTATCTGC...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTGAACGAAGCCTCCAATaGATGGCGGAGAATGGAAAG +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGERSLQ*MAENGK
Trigger: CTTTCCATTCTCCGCCATTCATTGGAGGCTTCGTTC...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CAGGAAATCGCCACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGCCATTCAATGGCCCTTaGAGGAAGCCCAGATGTCCA +
Preference number: 4 (lower is better)
Translates to: QEIATDLKEHHFLPRVPRPFNGP*RKPRCP
Trigger: TGGACATCTGGGCTTCCTTCAAGGGCCATTGAATGG...CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGGCCATTCTGTTCTCATaGGGCAACATTAGAATTACA +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWAILFS*GNIRIT
Trigger: TGTAATTCTAATGTTGCCTCATGAGAACAGAATGGC...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGTTCTCTGCCATGATCTaGGAGAGGTTAGGACACTGG +
Preference number: 4 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWFSAMI*ERLGHW
Trigger: CCAGTGTCCTAACCTCTCTCAGATCATGGCAGAGAA...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCTGGTCAAAGGTTCCTGAAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTAATAACCTGATGTTTTaGAAGCCATGGGAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: PGQRFLKALESRLTGMRPNNLMF*KPWESS
Trigger: GCTGCTTTCCCATGGCTTTCAAAACATCAGGTTATT...AGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTTCAGGAACCTTTGACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTAACATCATACTGTTCTaGAAGTCCAACACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFNIILF*KSNTGF
Trigger: GAAGCCAGTGTTGGACTTGCAGAACAGTATGATGTT...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGGAGAGGCTTCTGTTTTaGTTTTACCCTAGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWERLLF*FYPSVC
Trigger: ACAAACACTAGGGTAAAAGCAAAACAGAAGCCTCTC...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCACTCGGTTCCAGGCTCTaGACTCTTAGTACAACCCAT +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSLGSRL*TLSTTH
Trigger: ATGGGTTGTACTAAGAGTGCAGAGCCTGGAACCGAG...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTCTCGGTTCCAGGCTCTaGACTCTTAGTACAACCCAT +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVLGSRL*TLSTTH
Trigger: ATGGGTTGTACTAAGAGTGCAGAGCCTGGAACCGAG...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTATATAACTGGGGGTTCTaGCATAACTGGATTTTCTTT +
Preference number: 4 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLYNWGF*HNWIFF
Trigger: AAAGAAAATCCAGTTATGGCAGAACCCCCAGTTATA...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGGCAGTCATCAACCGCTaGTCCTTCGTCTTACTATCA +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWAVINR*SFVLLS
Trigger: TGATAGTAAGACGAAGGAGCAGCGGTTGATGACTGC...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGCTTTGGTTTAAACGCTaGCACCGCTTTTTAGGCACC +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWLWFKR*HRFLGT
Trigger: GGTGCCTAAAAAGCGGTGGCAGCGTTTAAACCAAAG...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTCAACCGACCTTTAGATaGAGAAACATTGGCTGGATT +
Preference number: 4 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFQPTFR*RNIGWI
Trigger: AATCCAGCCAATGTTTCTGCATCTAAAGGTCGGTTG...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CAGGAAATCGCCACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTGCCCATCTTATCCTTaGTGCTCACGTCACCCTCCA +
Preference number: 4 (lower is better)
Translates to: QEIATDLKEHHFLPRVPRCPSYP*CSRHPP
Trigger: TGGAGGGTGACGTGAGCAGCAAGGATAAGATGGGCA...CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTTCCCATCCACTCCTTTaGCCATCTTATCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGSHPLL*PSYPCC
Trigger: GCAGCAAGGATAAGATGGGCAAAGGAGTGGATGGGA...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGAGGCAGCCTGGTTTCTTaGAGGAGACGAGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRGSLVS*RRRAGQ
Trigger: CTGGCCAGCTCGTCTCCTGCAAGAAACCAGGCTGCC...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGATCTTGGTCCTGCCACTaGTGGTGGCCTGTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRSWSCH*WWPVQW
Trigger: CCACTGGACAGGCCACCAGCAGTGGCAGGACCAAGA...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTCCAAGGGTTCCTAGGTaGCCTCAATGGGGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPPRVPR*PQWGSV
Trigger: GACAGAGCCCCATTGAGGGCACCTAGGAACCCTTGG...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCCTTGCTGGCCTCAATaGAGCACCCTTGCATCTATA +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVPCWPQ*STLASI
Trigger: TATAGATGCAAGGGTGCTGCATTGAGGCCAGCAAGG...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp TGTCCTGTGAGACATCTAGACTGCTGTCAAGTTGATTACCTACCAAAGCCTACTCACAGCCAACAGCCTTaGTGGCCTCAATGCAGCACC +
Preference number: 4 (lower is better)
Translates to: CPVRHLDCCQVDYLPKPTHSQQP*WPQCST
Trigger: GGTGCTGCATTGAGGCCAGCAAGGCTGTTGGCTGTG...AGTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCTAGATGTCTCACAGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GATATAGGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGAATGCCTTCTTCCACTaGTGGAAATCTACATTCGCA +
Preference number: 4 (lower is better)
Translates to: DIGSLPPLDCTGPLQGWVNAFFH*WKSTFA
Trigger: TGCGAATGTAGATTTCCAGCAGTGGAAGAAGGCATT...CACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCTGGTCAAAGGTTCCTGAAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTACTCTGACAGTGCAGTaGAGATACCTTTTTCTGATC +
Preference number: 4 (lower is better)
Translates to: PGQRFLKALESRLTGMRPTLTVQ*RYLFLI
Trigger: GATCAGAAAAAGGTATCTGCACTGCACTGTCAGAGT...AGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTTCAGGAACCTTTGACCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTGAGAATTTCAACTTTTaGCTTGTCCCTGGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFENFNF*LVPGKG
Trigger: GCCTTTTCCAGGGACAAGGCAAAAGTTGAAATTCTC...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCTGGTCAAAGGTTCCTGAAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTCCTATCCAAGTTTCATaGTGTCCTCATTACTCCCTA +
Preference number: 4 (lower is better)
Translates to: PGQRFLKALESRLTGMRPPIQVS*CPHYSL
Trigger: TAGGGAGTAATGAGGACAGCATGAAACTTGGATAGG...AGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTTCAGGAACCTTTGACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGAGGCAGCTCCTTCTCTaGCATGATCTGAGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLRQLLL*HDLREV
Trigger: AACCTCTCTCAGATCATGGCAGAGAAGGAGCTGCCT...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGAAGCCTCTGGCCCTGTTaGACTGGCCCTAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRSLWPC*TGPRKL
Trigger: GAGCTTCCTAGGGCCAGTGCAACAGGGCCAGAGGCT...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTGCTTCTACTCTCTGTaGCCATGTCTTGTCCACGAA +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGCFYSL*PCLVHE
Trigger: TTCGTGGACAAGACATGGGCACAGAGAGTAGAAGCA...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGGTCTACTCTCTGGTGTaGTGTCTTGTTCACTTCCCA +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWVYSLV*CLVHFP
Trigger: TGGGAAGTGAACAAGACAGCACACCAGAGAGTAGAC...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439151.7
CDS-3UTR CCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGACTGGTACTGGAATCTaGATCATCCGAAAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGTGTGI*IIRKGC
Trigger: ACAGCCCTTTCGGATGATCCAGATTCCAGTACCAGT...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347982.8
ENST00000354179.8
CDS-3UTR CCA 90 bp TTCTCTCGAGAACACTTTGAGATCAAAGCACCCTCAGGCAAGCCCAATAAAGAGCCTGCAGGGCCACCATaGGCGTCTCTTGAATTTTGC +
Preference number: 4 (lower is better)
Translates to: FSREHFEIKAPSGKPNKEPAGPP*ASLEFC
Trigger: GCAAAATTCAAGAGACGCCCATGGTGGCCCTGCAGG...CTCTTTATTGGGCTTGCCTGAGGGTGCTTTGATCTCAAAGTGTTCTCGAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638627.2
CDS-3UTR CCA 90 bp CCTGGTCAAAGGTTCCTGAAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTCTGCAAGTCCAACACTaGCTTCCCATTTACTCAAAA +
Preference number: 4 (lower is better)
Translates to: PGQRFLKALESRLTGMRPLQVQH*LPIYSK
Trigger: TTTTGAGTAAATGGGAAGCCAGTGTTGGACTTGCAG...AGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTTCAGGAACCTTTGACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAAACAGAAAACTTCCTaGGGCAGTGTTGGACCCTGT +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFKQKTS*GSVGPC
Trigger: ACAGGGTCCAACACTGCCCCAGGAAGTTTTCTGTTT...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCACTGAGCTGTGTTCTATaGGATCCAGGTCACTGCTTC +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSLSCVL*DPGHCF
Trigger: GAAGCAGTGACCTGGATCCCATAGAACACAGCTCAG...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTATCTATCGAAAGCATCTaGAATTTCAAGGACACTGTT +
Preference number: 4 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLSIESI*NFKDTV
Trigger: AACAGTGTCCTTGAAATTCCAGATGCTTTCGATAGA...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGTTAACGAGTTCTCACTaGATATGCTTGATGACAGGT +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWLTSSH*ICLMTG
Trigger: ACCTGTCATCAAGCATATCCAGTGAGAACTCGTTAA...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCTCTGAATTGTGTGTaGAGCCTCCTGAAACCAAAA +
Preference number: 4 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFSLNCV*SLLKPK
Trigger: TTTTGGTTTCAGGAGGCTCCACACACAATTCAGAGA...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTGCCACAAAGTACAGAGTCCAGCTCTaGGCCTTTTCCGTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: HTAAKRHFLNTTTSGATKYRVQL*AFSVFK
Trigger: TTTGAAAACGGAAAAGGCCCAGAGCTGGACTCTGTA...CTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTGCCCTCAATGGGGTTTAGTGCGCCTTTaGTTTAAACGCTGCCACCGC +
Preference number: 4 (lower is better)
Translates to: TDLKEHHFLPRVPRCPQWGLVRL*FKRCHR
Trigger: GCGGTGGCAGCGTTTAAACCAAAGGCGCACTAAACC...CCATTGAGGGCACCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTCAAACTGGGAATTCCTaGCTCCTTTTCCATGTCACC +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGQTGNS*LLFHVT
Trigger: GGTGACATGGAAAAGGAGCCAGGAATTCCCAGTTTG...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACCCTGTGGTGTCAAACTaGGAATTCCTGGCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: KALESRLTGMRPVSLISDPVVSN*EFLAPF
Trigger: AAAAGGAGCCAGGAATTCCCAGTTTGACACCACAGG...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTCCTCAACAGTCTCCTTaGGGCTTGTGGCCGTCCTGT +
Preference number: 4 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPPQQSP*GLWPSC
Trigger: ACAGGACGGCCACAAGCCCCAAGGAGACTGTTGAGG...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGTCAACCTCTGGATATTaGCGCTTGGAAAAGCACTGG +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGSTSGY*RLEKHW
Trigger: CCAGTGCTTTTCCAAGCGCCAATATCCAGAGGTTGA...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCTGGTCAAAGGTTCCTGAAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTTTTCTTCCGTGGCAATaGGTTGATTCTTTGGCCTTA +
Preference number: 4 (lower is better)
Translates to: PGQRFLKALESRLTGMRPFLPWQ*VDSLAL
Trigger: TAAGGCCAAAGAATCAACCCATTGCCACGGAAGAAA...AGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTTCAGGAACCTTTGACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTTTTGTGATTTCACCCTaGGTCCTGCGCTTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGFVISP*VLRFPC
Trigger: ACAGGGAAAGCGCAGGACCCAGGGTGAAATCACAAA...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTTTTGTGATTTCACCCTaGGTCCTGCGCTTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVFVISP*VLRFPC
Trigger: ACAGGGAAAGCGCAGGACCCAGGGTGAAATCACAAA...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAAACTTTTGGGCAGCCTaGTTTCTTGCAGGAGACGAG +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSNFWAA*FLAGDE
Trigger: CTCGTCTCCTGCAAGAAACCAGGCTGCCCAAAAGTT...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGAACTTTTGGGCAGCCTaGTTTCTTGCAGGAGACGAG +
Preference number: 4 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLNFWAA*FLAGDE
Trigger: CTCGTCTCCTGCAAGAAACCAGGCTGCCCAAAAGTT...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTGCGTGGTAAACTTTTaGGCAGCCTGGTTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGCVVNF*AAWFLA
Trigger: TGCAAGAAACCAGGCTGCCCAAAAGTTTACCACGCA...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTGCGTGGTAAACTTTTaGGCAGCCTGGTTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWCVVNF*AAWFLA
Trigger: TGCAAGAAACCAGGCTGCCCAAAAGTTTACCACGCA...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGCTTACAAAAGGAGCTaGGGCACATCTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLAYKRS*GTSHRR
Trigger: CCTTCTGTGAGATGTGCCCCAGCTCCTTTTGTAAGC...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAGCGACAGCATCTGGTTaGTGTCAGCAGGAGGTTTAT +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSATASG*CQQEVY
Trigger: ATAAACCTCCTGCTGACACCAACCAGATGCTGTCGC...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CAGGAAATCGCCACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGCTAAAGGCTGGGGCCTaGAGTCAGTTCTCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: QEIATDLKEHHFLPRVPRLKAGA*SQFSQE
Trigger: CTCTTGAGAGAACTGACTCCAGGCCCCAGCCTTTAG...CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CAGGAAATCGCCACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGCCAGTGGCCTCTGGCTaGAAACCAAGGATTGGGATT +
Preference number: 4 (lower is better)
Translates to: QEIATDLKEHHFLPRVPRPVASG*KPRIGI
Trigger: AATCCCAATCCTTGGTTTCCAGCCAGAGGCCACTGG...CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TGTCCTGTGAGACATCTAGACTGCTGTCAAGTTGATTACCTACCAAAGCCTACTGGATTTATCCAGCCTTaGGTCAGCCGTCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: CPVRHLDCCQVDYLPKPTGFIQP*VSRPQR
Trigger: CCTCTGGGGACGGCTGACCCAAGGCTGGATAAATCC...AGTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCTAGATGTCTCACAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTGAAGTCTCAGGCCAGTaGGAACTGAGGTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGEVSGQ*ELRFSP
Trigger: TGGAGAAAACCTCAGTTCCCACTGGCCTGAGACTTC...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGAAGATTGCCCACTCTTaGCGGCAAGTGCAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWKIAHS*RQVQVV
Trigger: AACTACCTGCACTTGCCGCCAAGAGTGGGCAATCTT...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGTCTGTCTCCTTGGTTaGGGCCCACTGGATTTTCAT +
Preference number: 4 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLVCLLG*GPLDFH
Trigger: ATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGAC...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTGTCTGTCTCCTTGGTTaGGGCCCACTGGATTTTCAT +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGVCLLG*GPLDFH
Trigger: ATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGAC...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTACCATGTGGAAAAGTTaGGGGAAAGAGACCCAAGTC +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGTMWKS*GKETQV
Trigger: GACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGGCCTTCTTCCACTGCTaGAAATCTACATTCGCACAG +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGAFFHC*KSTFAQ
Trigger: CTGTGCGAATGTAGATTTCCAGCAGTGGAAGAAGGC...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCGAAGCCTCCAATGAATaGCGGAGAATGGAAAGAACC +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFEASNE*RRMERT
Trigger: GGTTCTTTCCATTCTCCGCCATTCATTGGAGGCTTC...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTACAATTCACATCCCTTTaGAAAAGGGGTCTTATTACA +
Preference number: 4 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLQFTSL*KRGLIT
Trigger: TGTAATAAGACCCCTTTTCCAAAGGGATGTGAATTG...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGGGCCTCCTGGGGAGCTaGCTCCAAGGCAAACACTCT +
Preference number: 4 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVGLLGS*LQGKHS
Trigger: AGAGTGTTTGCCTTGGAGCCAGCTCCCCAGGAGGCC...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GCACATACCCAAATACCACCCTGCGTTAAGGACCAGAAGTTTTCTAAGATGAAACTGGAAAAGGCCTCCTaGGGAGCTGGCTCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: AHTQIPPCVKDQKFSKMKLEKAS*GAGSKA
Trigger: TGCCTTGGAGCCAGCTCCCCAGGAGGCCTTTTCCAG...TTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTGCCCTGACCATAGTGTaGGGTGAAGGATGTAAAGAA +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGALTIV*GEGCKE
Trigger: TTCTTTACATCCTTCACCCCACACTATGGTCAGGGC...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGCTGCTCCAGGCAGCGTaGACGGAGGCTATGGACAAG +
Preference number: 4 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVLLQAA*TEAMDK
Trigger: CTTGTCCATAGCCTCCGTCCACGCTGCCTGGAGCAG...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CAA 72 bp GAACCCGGGTTTCTTGAGCTGCCAGTCCCTCAACCCTaGGCAGTGCTTATTTATACCGTGAAATTAGCACCA +
Preference number: 4 (lower is better)
Translates to: EPGFLELPVPQP*AVLIYTVKLAP
Trigger: TGGTGCTAATTTCACGGTATAAATAAGCACTGCCAAGGGTTGAGGGACTGGCAGCTCAAGAAACCCGGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGAGGTAGTTCACAGGTCTaGTCCATCCTGGGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRGSSQV*SILGRH
Trigger: ATGCCGGCCCAGGATGGATCAGACCTGTGAACTACC...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp AAAATTCTCTTTGCTAACATTACCGGCGGTGACCAAACAATGTGTTTGGGCAGAGGTAGTTCACAGGTCTaGTCCATCCTGGGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: KILFANITGGDQTMCLGRGSSQV*SILGRH
Trigger: ATGCCGGCCCAGGATGGATCAGACCTGTGAACTACC...TCTGCCCAAACACATTGTTTGGTCACCGCCGGTAATGTTAGCAAAGAGAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511258.5
CDS-3UTR TCA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCTTCACTGTCCAACTTaGTTGAACCAGGAATACATT +
Preference number: 4 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFLHCPT*LNQEYI
Trigger: AATGTATTCCTGGTTCAATCAAGTTGGACAGTGAAG...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp TTCTCTCGAGAACACTTTGAGATCAAAGCACCCTCAGGCAAGCCCAATAAAGAGGCAGAGCTTCACTTTTaGACCACACACCAGGCTTCG +
Preference number: 4 (lower is better)
Translates to: FSREHFEIKAPSGKPNKEAELHF*TTHQAS
Trigger: CGAAGCCTGGTGTGTGGTTCAAAAGTGAAGCTCTGC...CTCTTTATTGGGCTTGCCTGAGGGTGCTTTGATCTCAAAGTGTTCTCGAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638627.2
CDS-3UTR TCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGACTGTTATCAGACTCTaGGCTGTGTTCTATGGGATC +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWTVIRL*AVFYGI
Trigger: GATCCCATAGAACACAGCTCAGAGTCTGATAACAGT...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTTGTTTCTATGTCACTTaGATCCCTGGTTTTCTCATG +
Preference number: 4 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFCFYVT*IPGFLM
Trigger: CATGAGAAAACCAGGGATTCAAGTGACATAGAAACA...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGTGTTTCTATGTCACTTaGATCCCTGGTTTTCTCATG +
Preference number: 4 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWCFYVT*IPGFLM
Trigger: CATGAGAAAACCAGGGATTCAAGTGACATAGAAACA...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTATGTTCCAGAGTCACTaGCATCCTCACCTAAGGATC +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVMFQSH*HPHLRI
Trigger: GATCCTTAGGTGAGGATGTCAGTGACTCTGGAACAT...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGATCTCCCTTTTTCTCTaGATTGTGTGTGGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLISLFL*IVCGAS
Trigger: GGAGGCTCCACACACAATTCAGAGAAAAAGGGAGAT...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTCCTAGTAACACAGTCTaGACGACTTTTACCAGAAGC +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGPSNTV*TTFTRS
Trigger: GCTTCTGGTAAAAGTCGTTCAGACTGTGTTACTAGG...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGGTCACACTTGGAAGCTaGTTCAGTTTTCTTTTGCGC +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGVTLGS*FSFLLR
Trigger: GCGCAAAAGAAAACTGAATCAGCTTCCAAGTGTGAC...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTCGCCTAGGGGTAAAGTaGTTAGGGCAGATGATACTA +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVRLGVK*LGQMIL
Trigger: TAGTATCATCTGCCCTAATCACTTTACCCCTAGGCG...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGCGCCTAGGGGTAAAGTaGTTAGGGCAGATGATACTA +
Preference number: 4 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLRLGVK*LGQMIL
Trigger: TAGTATCATCTGCCCTAATCACTTTACCCCTAGGCG...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTTTCAGGCATTCACGATaGAAAGCAGCAGGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGFRHSR*KAAGQE
Trigger: TTCTTGCCCTGCTGCTTTTCATCGTGAATGCCTGAA...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTGCCCTCAATGGTGGGACCAGCATCAATaGTTCGGTCTTTGTCTAGGG +
Preference number: 4 (lower is better)
Translates to: TDLKEHHFLPRVPRCPQWWDQHQ*FGLCLG
Trigger: CCCTAGACAAAGACCGAATCATTGATGCTGGTCCCA...CCATTGAGGGCACCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGGGCAGCAATGATTCATaGACCGAGCATAGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGGSNDS*TEHSFL
Trigger: AAGGAAACTATGCTCGGTTCATGAATCATTGCTGCC...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTTGTCTGAAGAGGATCTaGCACACAGCCTTTCTCAAC +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVCLKRI*HTAFLN
Trigger: GTTGAGAAAGGCTGTGTGTCAGATCCTCTTCAGACA...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTTGTCTGAAGAGGATCTaGCACACAGCCTTTCTCAAC +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGCLKRI*HTAFLN
Trigger: GTTGAGAAAGGCTGTGTGTCAGATCCTCTTCAGACA...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTGCTCTTCCTGAGGCCTaGGTTGTTGGCTCATATAAA +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGALPEA*VVGSYK
Trigger: TTTATATGAGCCAACAACTCAGGCCTCAGGAAGAGC...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTCTATACCTTCCAACCTaGCCAGCGGAATTGAATTCC +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGLYLPT*PAELNS
Trigger: GGAATTCAATTCCGCTGGTCAGGTTGGAAGGTATAG...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp TGTCCTGTGAGACATCTAGACTGCTGTCAAGTTGATTACCTACCAAAGCCTACTCCAGGCTCACAGGGATaGGGCCTGTATCTCTCATCA +
Preference number: 4 (lower is better)
Translates to: CPVRHLDCCQVDYLPKPTPGSQG*GLYLSS
Trigger: TGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGG...AGTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCTAGATGTCTCACAGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTGCCCTCAATGGAGTGAAAGGAGACTCTaGCAGTGCAGTGCAGATACC +
Preference number: 4 (lower is better)
Translates to: TDLKEHHFLPRVPRCPQWSERRL*QCSADT
Trigger: GGTATCTGCACTGCACTGTCAGAGTCTCCTTTCACT...CCATTGAGGGCACCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGAGAGGGTCAACACAGTaGTTTAAGTCATCTCAAACT +
Preference number: 4 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWRGSTQ*FKSSQT
Trigger: AGTTTGAGATGACTTAAATCACTGTGTTGACCCTCT...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CTTTTTGGATTATCAGAGCTCTTTCTGGCTCGAGATTTAGCGCAAGGCTTTTCCGATCAGAACAAATCCTaGAGGGCCACCATGGGCGTC +
Preference number: 4 (lower is better)
Translates to: LFGLSELFLARDLAQGFSDQNKS*RATMGV
Trigger: GACGCCCATGGTGGCCCTGCAGGATTTGTTCTGATC...GGAAAAGCCTTGCGCTAAATCTCGAGCCAGAAAGAGCTCTGATAATCCAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR GCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTTTCAAACATGACGATTaGTTTTCCAGCCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVFKHDD*FSSHPG
Trigger: GCCTGGGTGGCTGGAAAAGCAATCGTCATGTTTGAA...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTGCAGTCATCAACCGCTaGTCCTTCGTCTTACTATCA +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGAVINR*SFVLLS
Trigger: TGATAGTAAGACGAAGGAGCAGCGGTTGATGACTGC...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGTTACCAGGATCAGATTaGTTAACCTTGCTATCGAAA +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWLPGSD*LTLLSK
Trigger: TTTCGATAGCAAGGTTAAGCAATCTGATCCTGGTAA...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCTTTGGTTTAAACGCTaGCACCGCTTTTTAGGCACC +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVLWFKR*HRFLGT
Trigger: GGTGCCTAAAAAGCGGTGGCAGCGTTTAAACCAAAG...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCTTACCTTGTGCACCTaGTCCTGTACCTTCTTTTGT +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGLTLCT*SCTFFC
Trigger: ACAAAAGAAGGTACAGGAGCAGGTGCACAAGGTAAG...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGCACAAGATTCAGTTATaGCATTCTCCAGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: PCGKVGGKRPKSVCLLGWHKIQL*HSPGDQ
Trigger: CTGGTCACCTGGAGAATGGCATAACTGAATCTTGTG...CCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGCACAAGATTCAGTTATaGCATTCTCCAGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWHKIQL*HSPGDQ
Trigger: CTGGTCACCTGGAGAATGGCATAACTGAATCTTGTG...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGAACCCCGCTGTAATGTaGGGAAAATTTCAACCTCTG +
Preference number: 4 (lower is better)
Translates to: PCGKVGGKRPKSVCLLGWNPAVM*GKFQPL
Trigger: CAGAGGTTGAAATTTTCCGCACATTACAGCGGGGTT...CCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGCAGATTGAGACAGTCTaGGTGGTAAACTTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWQIETV*VVNFWA
Trigger: TGCCCAAAAGTTTACCACGCAGACTGTCTCAATCTG...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTACATTCCCATTTCCCTaGTGGTCGCTTGGTCAGATT +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVTFPFP*WSLGQI
Trigger: AATCTGACCAAGCGACCAGCAGGGAAATGGGAATGT...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGGGCCCACAGGGGTCATaGTCAGTACAAGACAGACGC +
Preference number: 4 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVGPQGS*SVQDRR
Trigger: GCGTCTGTCTTGTACTGAGCATGACCCCTGTGGGCC...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GCACATACCCAAATACCACCCTGCGTTAAGGACCAGAAGTTTTCTAAGATGAAAGGCCCACAGGGGTCATaGTCAGTACAAGACAGACGC +
Preference number: 4 (lower is better)
Translates to: AHTQIPPCVKDQKFSKMKGPQGS*SVQDRR
Trigger: GCGTCTGTCTTGTACTGAGCATGACCCCTGTGGGCC...TTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGGTCCACAGGCCTCAGTaGTTTTTCTTTAGCTACAAG +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWVHRPQ*FFFSYK
Trigger: CTTGTAGCTAAAGAAAAAGCACTGAGGCCTGTGGAC...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTAGAGACCTAAAAGATTaGCCACTCTTGGCGGCAAGT +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVRDLKD*PLLAAS
Trigger: ACTTGCCGCCAAGAGTGGGCAATCTTTTAGGTCTCT...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGAGAGACCTAAAAGATTaGCCACTCTTGGCGGCAAGT +
Preference number: 4 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWRDLKD*PLLAAS
Trigger: ACTTGCCGCCAAGAGTGGGCAATCTTTTAGGTCTCT...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTAGACCAGCAAGACTGTaGCAGTGTCTGTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPRPARL*QCLSSH
Trigger: GTGGCTGGACAGACACTGGCACAGTCTTGCTGGTCT...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GCACATACCCAAATACCACCCTGCGTTAAGGACCAGAAGTTTTCTAAGATGAAACCAAGGGTTCCTAGGTaGCCTCAATGGGGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: AHTQIPPCVKDQKFSKMKPRVPR*PQWGSV
Trigger: GACAGAGCCCCATTGAGGGCACCTAGGAACCCTTGG...TTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTGCCACAAAGCACAACCACTTCTGGTaGCACAAAGGACATTTCAAA +
Preference number: 4 (lower is better)
Translates to: HTAAKRHFLNTTTSGATKHNHFW*HKGHFK
Trigger: TTTGAAATGTCCTTTGTGGCACCAGAAGTGGTTGTG...CTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GCACATACCCAAATACCACCCTGCGTTAAGGACCAGAAGTTTTCTAAGATGAAAATGCACACGCACCCATaGACACCGCAGCCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: AHTQIPPCVKDQKFSKMKMHTHP*TPQPRD
Trigger: GTCTCTTGGCTGCGGTGTGCATGGGTGCGTGTGCAT...TTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGTCAATGCAGCACCCTTaGATCTATAGAGGAGACCTC +
Preference number: 4 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWSMQHP*IYRGDL
Trigger: GAGGTCTCCTCTATAGATGCAAGGGTGCTGCATTGA...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AGATGTATTGGCTTTCTAGCTACCCATGGAGAATTTCAACTTTTGCCTTGTCCCAGCTCTCTAACAACCTaGTCCAGGCAGCGTGGACGG +
Preference number: 4 (lower is better)
Translates to: RCIGFLATHGEFQLLPCPSSLTT*SRQRGR
Trigger: CCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCT...GGGACAAGGCAAAAGTTGAAATTCTCCATGGGTAGCTAGAAAGCCAATACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCTGACAGTCGATAACTaGATAGTACACCCATTAAGT +
Preference number: 4 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFLTVDN*IVHPLS
Trigger: ACTTAATGGGTGTACTATGCAGTTATCGACTGTCAG...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439151.7
CDS-3UTR GCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCACTGTTTCATAGCAAGTaGTGTAGGACCACCAGGACT +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSLFHSK*CRTTRT
Trigger: AGTCCTGGTGGTCCTACAGCACTTGCTATGAAACAG...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439151.7
CDS-3UTR CCA 90 bp AAAATTCTCTTTGCTAACATTACCGGCGGTGACCAAACAATGTGTTTGGGCAGAAGGTCTGATCCATCCTaGGCCGGCATCAACCTGAGG +
Preference number: 4 (lower is better)
Translates to: KILFANITGGDQTMCLGRRSDPS*AGINLR
Trigger: CCTCAGGTTGATGCCGGCCCAGGATGGATCAGACCT...TCTGCCCAAACACATTGTTTGGTCACCGCCGGTAATGTTAGCAAAGAGAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511258.5
CDS-3UTR CCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTACTGGTACTGGAATCTaGATCATCCGAAAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVTGTGI*IIRKGC
Trigger: ACAGCCCTTTCGGATGATCCAGATTCCAGTACCAGT...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347982.8
ENST00000354179.8
CDS-3UTR CCA 90 bp CACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTGCCACAAAGCTGCAAGTCCAACACTaGCTTCCCATTTACTCAAAA +
Preference number: 4 (lower is better)
Translates to: HTAAKRHFLNTTTSGATKLQVQH*LPIYSK
Trigger: TTTTGAGTAAATGGGAAGCCAGTGTTGGACTTGCAG...CTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGGCTTCAAATTGTATGTaGCCCTTTTTCACACTAGTC +
Preference number: 4 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWASNCM*PFFTLV
Trigger: GACTAGTGTGAAAAAGGGCCACATACAATTTGAAGC...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGAAACAGAAAACTTCCTaGGGCAGTGTTGGACCCTGT +
Preference number: 4 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLKQKTS*GSVGPC
Trigger: ACAGGGTCCAACACTGCCCCAGGAAGTTTTCTGTTT...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGCACACCAGGCTTCGTTaGGGTTTATTCTTCTCTCGA +
Preference number: 4 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLHTRLR*GLFFSR
Trigger: TCGAGAGAAGAATAAACCCCAACGAAGCCTGGTGTG...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGCACACCAGGCTTCGTTaGGGTTTATTCTTCTCTCGA +
Preference number: 4 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWHTRLR*GLFFSR
Trigger: TCGAGAGAAGAATAAACCCCAACGAAGCCTGGTGTG...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACCCCTTGGGAACATCATACTGTTCTGCAAGTCCAACACTGGCTTCCCATTTACCTGAGCTGTGTTCTATaGGATCCAGGTCACTGCTTC +
Preference number: 4 (lower is better)
Translates to: TPWEHHTVLQVQHWLPIYLSCVL*DPGHCF
Trigger: GAAGCAGTGACCTGGATCCCATAGAACACAGCTCAG...GTAAATGGGAAGCCAGTGTTGGACTTGCAGAACAGTATGATGTTCCCAAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638627.2
CDS-3UTR CCA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTGGGTTCTGCCATAACTaGATTTTCTTTGTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFGFCHN*IFFVFA
Trigger: TGCAAACACAAAGAAAATCCAGTTATGGCAGAACCC...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGCCAAAGGAGAGCCTTTaGTATCAGAAGAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGPKESL*YQKSSI
Trigger: AATGCTGCTCTTCTGATACCAAAGGCTCTCCTTTGG...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGCACCAATGCTGGCACTaGATTTATCACAAACATTTA +
Preference number: 4 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWHQCWH*IYHKHL
Trigger: TAAATGTTTGTGATAAATCCAGTGCCAGCATTGGTG...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGCAAACTGGGAATTCCTaGCTCCTTTTCCATGTCACC +
Preference number: 4 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWQTGNS*LLFHVT
Trigger: GGTGACATGGAAAAGGAGCCAGGAATTCCCAGTTTG...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTTCTCCTTGGGGCTTGTaGCCGTCCTGTGAGGCATTA +
Preference number: 4 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPSPWGL*PSCEAL
Trigger: TAATGCCTCACAGGACGGCCACAAGCCCCAAGGAGA...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCTCTGTGTTTCACAGTTaGGCTGGCAGCAATGATTCA +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFSVFHS*AGSNDS
Trigger: TGAATCATTGCTGCCAGCCCAACTGTGAAACACAGA...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGTGCGTGGTAAACTTTTaGGCAGCCTGGTTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLCVVNF*AAWFLA
Trigger: TGCAAGAAACCAGGCTGCCCAAAAGTTTACCACGCA...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGTTTATCTGACATTTTaGGTGCCTGAGCAGCCATTC +
Preference number: 4 (lower is better)
Translates to: PCGKVGGKRPKSVCLLGWVYLTF*VPEQPF
Trigger: GAATGGCTGCTCAGGCACCCAAAATGTCAGATAAAC...CCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGTTAGCTACAAGGGTCTaGACCACAGCTGATAGTACT +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGLATRV*TTADST
Trigger: AGTACTATCAGCTGTGGTCCAGACCCTTGTAGCTAA...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGGAAAGAAGTCTGGCCTaGGTGAGTGATTTAACAGCT +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGERSLA*VSDLTA
Trigger: AGCTGTTAAATCACTCACCCAGGCCAGACTTCTTTC...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACGAAAGAAGTCTGGCCTaGGTGAGTGATTTAACAGCT +
Preference number: 4 (lower is better)
Translates to: KALESRLTGMRPVSLISDERSLA*VSDLTA
Trigger: AGCTGTTAAATCACTCACCCAGGCCAGACTTCTTTC...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAGCCTGGTTAAGAGCTaGAAGTGTATTTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFSLVKS*KCILLW
Trigger: CCAGAGCAAAATACACTTCCAGCTCTTAACCAGGCT...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGAGCCTGGTTAAGAGCTaGAAGTGTATTTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWSLVKS*KCILLW
Trigger: CCAGAGCAAAATACACTTCCAGCTCTTAACCAGGCT...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTACCATAAGCCCCCACTaGCTAATGTCACAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVTISPH*LMSQEF
Trigger: GAACTCTTGTGACATTAGCCAGTGGGGGCTTATGGT...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGACCATAAGCCCCCACTaGCTAATGTCACAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWTISPH*LMSQEF
Trigger: GAACTCTTGTGACATTAGCCAGTGGGGGCTTATGGT...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGTTGGTTGGGGCCCACTaGATTTTCATACATGGTTCA +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGLVGAH*IFIHGS
Trigger: TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAA...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTTGGTTGGGGCCCACTaGATTTTCATACATGGTTCA +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGLVGAH*IFIHGS
Trigger: TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAA...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGACCATGTGGAAAAGTTaGGGGAAAGAGACCCAAGTC +
Preference number: 4 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWTMWKS*GKETQV
Trigger: GACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTTCACGATGACCATGTaGAAAAGTTGGGGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGFTMTM*KSWGKE
Trigger: CTCTTTCCCCCAACTTTTCCACATGGTCATCGTGAA...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCAACACAACCACTTCTaGTGCCACAAAGGACATTTC +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGQHNHF*CHKGHF
Trigger: GAAATGTCCTTTGTGGCACCAGAAGTGGTTGTGTTG...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGGCCTTCTTCCACTGCTaGAAATCTACATTCGCACAG +
Preference number: 4 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWAFFHC*KSTFAQ
Trigger: CTGTGCGAATGTAGATTTCCAGCAGTGGAAGAAGGC...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCATTCAGGGAAGGGTTCTaGCTTGCCTTTGAGCTAAGT +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSFREGF*LAFELS
Trigger: ACTTAGCTCAAAGGCAAGCCAGAACCCTTCCCTGAA...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTATTAGAATTACAACCTaGGAGTCCGGCTCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGIRITT*ESGSSE
Trigger: CTCACTGGAGCCGGACTCCCAGGTTGTAATTCTAAT...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTCCTCATTACTCCCTATaGGGGAATCTGTCAGGACTA +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGPHYSL*GNLSGL
Trigger: TAGTCCTGACAGATTCCCCCATAGGGAGTAATGAGG...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCACAGTCCCTCAACCCTTaGCAGTGCTTATTTATACCG +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSQSLNP*QCLFIP
Trigger: CGGTATAAATAAGCACTGCCAAGGGTTGAGGGACTG...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AGATGTATTGGCTTTCTAGCTACCCATGGAGAATTTCAACTTTTGCCTTGTCCCACCTCTGGATTGCACTaGGCCACTCCAGGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: RCIGFLATHGEFQLLPCPTSGLH*ATPGLG
Trigger: ACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGT...GGGACAAGGCAAAAGTTGAAATTCTCCATGGGTAGCTAGAAAGCCAATACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGCTAATGTACTGGTACTaGAATCTGGATCATCCTGAA +
Preference number: 4 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWLMYWY*NLDHPE
Trigger: TTCAGGATGATCCAGATTCCAGTACCAGTACATTAG...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439151.7
CDS-3UTR TCA 90 bp ATTGCTTTTCCAGCCACCCAGGCTCTCTCAGAAGGATCTCCAAAAGCCTCCACGCTTCACTGTCCAACTTaGTTGAACCAGGAATACATT +
Preference number: 4 (lower is better)
Translates to: IAFPATQALSEGSPKASTLHCPT*LNQEYI
Trigger: AATGTATTCCTGGTTCAATCAAGTTGGACAGTGAAG...CGTGGAGGCTTTTGGAGATCCTTCTGAGAGAGCCTGGGTGGCTGGAAAAGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR TCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAACAGGTCATGTTCTaGCTCAGGATCATTTGTGCA +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVQQVMF*LRIICA
Trigger: TGCACAAATGATCCTGAGTCAGAACATGACCTGTTG...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp TTCAAACATGACGATTGCTTTTCCAGCCACCCAGGCTCTCTCAGAAGGATCTCCCAACAGGTCATGTTCTaGCTCAGGATCATTTGTGCA +
Preference number: 4 (lower is better)
Translates to: FKHDDCFSSHPGSLRRISQQVMF*LRIICA
Trigger: TGCACAAATGATCCTGAGTCAGAACATGACCTGTTG...GGAGATCCTTCTGAGAGAGCCTGGGTGGCTGGAAAAGCAATCGTCATGTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR TCA 90 bp TGTCCTGTGAGACATCTAGACTGCTGTCAAGTTGATTACCTACCAAAGCCTACTCAGTGTTGGACCCTGTaGGGCTATTTGCTATCCTGG +
Preference number: 4 (lower is better)
Translates to: CPVRHLDCCQVDYLPKPTQCWTL*GYLLSW
Trigger: CCAGGATAGCAAATAGCCTCACAGGGTCCAACACTG...AGTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCTAGATGTCTCACAGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGATCATTTGTAAAATCTaGCTGGGGTTTGTGAACAAG +
Preference number: 4 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWIICKI*LGFVNK
Trigger: CTTGTTCACAAACCCCAGTCAGATTTTACAAATGAT...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTGCTTGATGACAGGTTaGATTTTGGAGAGAGAGCAT +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWCLMTG*ILEREH
Trigger: ATGCTCTCTCTCCAAAATTCAACCTGTCATCAAGCA...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAGAATGTAATAGAGCTTaGTTTGCTGCCCCACCCTTT +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSECNRA*FAAPPF
Trigger: AAAGGGTGGGGCAGCAAATCAAGCTCTATTACATTC...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTGAATGTAATAGAGCTTaGTTTGCTGCCCCACCCTTT +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGECNRA*FAAPPF
Trigger: AAAGGGTGGGGCAGCAAATCAAGCTCTATTACATTC...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCCTAGTAACACAGTCTaGACGACTTTTACCAGAAGC +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVPSNTV*TTFTRS
Trigger: GCTTCTGGTAAAAGTCGTTCAGACTGTGTTACTAGG...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTTCTAAGCAGTCAGCATaGTTTTGCTCTGTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVSKQSA*FCSVSG
Trigger: ACCACTGACAGAGCAAAATCATGCTGACTGCTTAGA...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGATCCACCTGCTTGTTCTaGGCACTAGATCGACCTCGG +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRSTCLF*ALDRPR
Trigger: CCGAGGTCGATCTAGTGCTCAGAACAAGCAGGTGGA...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTGCCACAAAGAGGCTCTTCTTTGGTTaGAATCAAAGAATTCTCGTC +
Preference number: 4 (lower is better)
Translates to: HTAAKRHFLNTTTSGATKRLFFG*NQRILV
Trigger: GACGAGAATTCTTTGATTTCAACCAAAGAAGAGCCT...CTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTGCCTGGAATCTCTTTTaGCGAGTCATCATTTTTCAC +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGAWNLF*RVIIFH
Trigger: GTGAAAAATGATGACTCGTCAAAAGAGATTCCAGGC...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACGCCTGGAATCTCTTTTaGCGAGTCATCATTTTTCAC +
Preference number: 4 (lower is better)
Translates to: KALESRLTGMRPVSLISDAWNLF*RVIIFH
Trigger: GTGAAAAATGATGACTCGTCAAAAGAGATTCCAGGC...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GCACATACCCAAATACCACCCTGCGTTAAGGACCAGAAGTTTTCTAAGATGAAACTTGTGGCCGTCCTGTaGGGCATTAGTTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: AHTQIPPCVKDQKFSKMKLVAVL*GISSPS
Trigger: AGAGGGAGAACTAATGCCTCACAGGACGGCCACAAG...TTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGAAAAGCCCCACAGCACTaGGCCTCACATAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRKAPQH*ASHNSS
Trigger: GCTGCTGTTATGTGAGGCTCAGTGCTGTGGGGCTTT...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GCACATACCCAAATACCACCCTGCGTTAAGGACCAGAAGTTTTCTAAGATGAAAAAGGCTGCCTCCTTCTaGGCACACAAAGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: AHTQIPPCVKDQKFSKMKKAASF*AHKAPA
Trigger: AGCTGGTGCTTTGTGTGCTCAGAAGGAGGCAGCCTT...TTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTGGCAGCAATGATTCATaGACCGAGCATAGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVGSNDS*TEHSFL
Trigger: AAGGAAACTATGCTCGGTTCATGAATCATTGCTGCC...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTGTACTACTTCTGTTCTaGTTCTGCACACTTGTGACT +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGVLLLF*FCTLVT
Trigger: AGTCACAAGTGTGCAGAATCAGAACAGAAGTAGTAC...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGCTGAGTGTTGGGATATaGGGAAAGAATAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLLSVGI*GKNNSG
Trigger: CCCACTGTTATTCTTTCCTCATATCCCAACACTCAG...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGAAATCGCCACTGATTTaGAAGAACACCATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGKSPLI*KNTISS
Trigger: GGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTT...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAAATCGCCACTGATTTaGAAGAACACCATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFKSPLI*KNTISS
Trigger: GGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTT...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTGCCACAAAGTCAGGAAATCGCCACTaGTTTGAAAGAACACCATTT +
Preference number: 4 (lower is better)
Translates to: HTAAKRHFLNTTTSGATKSGNRH*FERTPF
Trigger: AAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTGA...CTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp TGTCCTGTGAGACATCTAGACTGCTGTCAAGTTGATTACCTACCAAAGCCTACTCTGGTCAAAGGTTCCTaGAAGCCTTGGAATCCAGGC +
Preference number: 4 (lower is better)
Translates to: CPVRHLDCCQVDYLPKPTLVKGS*KPWNPG
Trigger: GCCTGGATTCCAAGGCTTTCAGGAACCTTTGACCAG...AGTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCTAGATGTCTCACAGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGAGTTCTGGCTTGCCTTTaGGCTAAGTCAGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRVLACL*AKSAGR
Trigger: CCTGCCTGCTGACTTAGCTCAAAGGCAAGCCAGAAC...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GCACATACCCAAATACCACCCTGCGTTAAGGACCAGAAGTTTTCTAAGATGAAAATTCCGAGGTCTCAGTaGAATGCAGGGATAGGCCCC +
Preference number: 4 (lower is better)
Translates to: AHTQIPPCVKDQKFSKMKIPRSQ*NAGIGP
Trigger: GGGGCCTATCCCTGCATTTCACTGAGACCTCGGAAT...TTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTGCCCTCAATGGTCCACGAAACTTTGCTaGACTTCCAGGACCTTACAC +
Preference number: 4 (lower is better)
Translates to: TDLKEHHFLPRVPRCPQWSTKLC*TSRTLH
Trigger: GTGTAAGGTCCTGGAAGTTCAGCAAAGTTTCGTGGA...CCATTGAGGGCACCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAGTCTTGAAAGGATTCTaGTCCATCAGCAGACCCATT +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSVLKGF*SISRPI
Trigger: AATGGGTCTGCTGATGGATCAGAATCCTTTCAAGAC...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439151.7
CDS-3UTR GCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTGCGTCTCTTGAATTTTaGCCAGATGAGATCTCCAAC +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVASLEF*PDEISN
Trigger: GTTGGAGATCTCATCTGGGCAAAATTCAAGAGACGC...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCCTTTTCCTTCTCATCTaGAGAATGTTCAGAATCAAA +
Preference number: 4 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLLFLLI*RMFRIK
Trigger: TTTGATTCTGAACATTCTGCAGATGAGAAGGAAAAG...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAGTTCATTAGAGGCCTaGGTATCAGATATATCCCCA +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFSSLEA*VSDISP
Trigger: TGGGGATATATCTGATACGCAGGCCTCTAATGAACT...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTCTTTTCCTCATCACCTaGTCCAATATAGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGLFLIT*SNIAEL
Trigger: AAGCTCTGCTATATTGGAGCAGGTGATGAGGAAAAG...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTGCCACAAAGGAGAGGCTTCTGTTTTaGTTTTACCCTAGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: HTAAKRHFLNTTTSGATKERLLF*FYPSVC
Trigger: ACAAACACTAGGGTAAAAGCAAAACAGAAGCCTCTC...CTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTGCCACAAAGGGAACTTGGGCTGTTTaGTTTTCGAATGTAATAGAG +
Preference number: 4 (lower is better)
Translates to: HTAAKRHFLNTTTSGATKGTWAV*FSNVIE
Trigger: CTCTATTACATTCGAAAAGCAAACAGCCCAAGTTCC...CTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCTCCCTGGTTTTCTCATaGATATTGTTCAGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLSLVFS*ILFSSF
Trigger: AAAACTACTGAACAATATGCATGAGAAAACCAGGGA...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCTGGTCAAAGGTTCCTGAAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTTTACCAGGATCAGATTaGTTAACCTTGCTATCGAAA +
Preference number: 4 (lower is better)
Translates to: PGQRFLKALESRLTGMRPLPGSD*LTLLSK
Trigger: TTTCGATAGCAAGGTTAAGCAATCTGATCCTGGTAA...AGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTTCAGGAACCTTTGACCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTCTTACCTTGTGCACCTaGTCCTGTACCTTCTTTTGT +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVLTLCT*SCTFFC
Trigger: ACAAAAGAAGGTACAGGAGCAGGTGCACAAGGTAAG...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTACAGACAAGGTCAGCTaGGGCAACTCAGCATGTCCA +
Preference number: 4 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPTDKVS*GNSACP
Trigger: TGGACATGCTGAGTTGCCGCAGCTGACCTTGTCTGT...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp TGTCCTGTGAGACATCTAGACTGCTGTCAAGTTGATTACCTACCAAAGCCTACTCGGAAGCCCTTGTTCTaGATAACAGTGGGTGGGTAC +
Preference number: 4 (lower is better)
Translates to: CPVRHLDCCQVDYLPKPTRKPLF*ITVGGY
Trigger: GTACCCACCCACTGTTATGCAGAACAAGGGCTTCCG...AGTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCTAGATGTCTCACAGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGCAACCGACCTTTAGATaGAGAAACATTGGCTGGATT +
Preference number: 4 (lower is better)
Translates to: PCGKVGGKRPKSVCLLGWQPTFR*RNIGWI
Trigger: AATCCAGCCAATGTTTCTGCATCTAAAGGTCGGTTG...CCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTTGCCCATCTTATCCTTaGTGCTCACGTCACCCTCCA +
Preference number: 4 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPCPSYP*CSRHPP
Trigger: TGGAGGGTGACGTGAGCAGCAAGGATAAGATGGGCA...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGACTCACAGAAGGAGGCTaGTTCCTTCCCGCAGATGTC +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRLTEGG*FLPADV
Trigger: GACATCTGCGGGAAGGAAGCAGCCTCCTTCTGTGAG...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp TGTCCTGTGAGACATCTAGACTGCTGTCAAGTTGATTACCTACCAAAGCCTACTTATGCCCCAGACCTTTaGTGGCAGGCCATGAACTTG +
Preference number: 4 (lower is better)
Translates to: CPVRHLDCCQVDYLPKPTYAPDL*WQAMNL
Trigger: CAAGTTCATGGCCTGCCAGCAAAGGTCTGGGGCATA...AGTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCTAGATGTCTCACAGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAATGCCTTCTTCCACTaGTGGAAATCTACATTCGCA +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFNAFFH*WKSTFA
Trigger: TGCGAATGTAGATTTCCAGCAGTGGAAGAAGGCATT...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGACCAGCCTCGTCCCTCTaGCTGAGTTCAAGTGTCTCA +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRPASSL*LSSSVS
Trigger: TGAGACACTTGAACTCAGGCAGAGGGACGAGGCTGG...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTACCCAAATACCACCCTaGGTTAAGGACCAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGTQIPP*VKDQKF
Trigger: AAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGT...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGGAGAATTTCAACTTTTaGCTTGTCCCTGGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWENFNF*LVPGKG
Trigger: GCCTTTTCCAGGGACAAGGCAAAAGTTGAAATTCTC...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAGGATCTCCAAAAGCCTCCACGTAGTACTGCCGATAGGGCCTCCGGTTGGAAACTAATGTACTGGTACTaGAATCTGGATCATCCGAAA +
Preference number: 4 (lower is better)
Translates to: KDLQKPPRSTADRASGWKLMYWY*NLDHPK
Trigger: TTTCGGATGATCCAGATTCCAGTACCAGTACATTAG...TTTCCAACCGGAGGCCCTATCGGCAGTACTACGTGGAGGCTTTTGGAGATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR CCA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTTGTTTCCTAATGTACTaGTACTGGAATCTGGATCAT +
Preference number: 4 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFCFLMY*YWNLDH
Trigger: ATGATCCAGATTCCAGTACCAGTACATTAGGAAACA...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCTGGTCAAAGGTTCCTGAAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTAACTTCATACTTCAGTaGCGTAGACTTTTTCTTAGG +
Preference number: 4 (lower is better)
Translates to: PGQRFLKALESRLTGMRPNFILQ*RRLFLR
Trigger: CCTAAGAAAAAGTCTACGCCACTGAAGTATGAAGTT...AGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTTCAGGAACCTTTGACCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGACCTGCAGGGCCACCATaGGCGTCTCTTGAATTTTGC +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRPAGPP*ASLEFC
Trigger: GCAAAATTCAAGAGACGCCCATGGTGGCCCTGCAGG...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TTGGGAACATCATACTGTTCTGCAAGTCCAACACTGGCTTCCCATTTACTCAAACCTGCAGGGCCACCATaGGCGTCTCTTGAATTTTGC +
Preference number: 4 (lower is better)
Translates to: LGTSYCSASPTLASHLLKPAGPP*ASLEFC
Trigger: GCAAAATTCAAGAGACGCCCATGGTGGCCCTGCAGG...TTTGAGTAAATGGGAAGCCAGTGTTGGACTTGCAGAACAGTATGATGTTCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR CCA 90 bp AAGGATCTCCAAAAGCCTCCACGTAGTACTGCCGATAGGGCCTCCGGTTGGAAAGATAGGGCCTCCGGTTaGAAACTTTCATTTTTGAAT +
Preference number: 4 (lower is better)
Translates to: KDLQKPPRSTADRASGWKDRASG*KLSFLN
Trigger: ATTCAAAAATGAAAGTTTCCAACCGGAGGCCCTATC...TTTCCAACCGGAGGCCCTATCGGCAGTACTACGTGGAGGCTTTTGGAGATCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR CCA 90 bp ATTGCTTTTCCAGCCACCCAGGCTCTCTCAGAAGGATCTCCAAAAGCCTCCACGGATAGGGCCTCCGGTTaGAAACTTTCATTTTTGAAT +
Preference number: 4 (lower is better)
Translates to: IAFPATQALSEGSPKASTDRASG*KLSFLN
Trigger: ATTCAAAAATGAAAGTTTCCAACCGGAGGCCCTATC...CGTGGAGGCTTTTGGAGATCCTTCTGAGAGAGCCTGGGTGGCTGGAAAAGCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR CCA 90 bp CCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGCTGCAAGTCCAACACTaGCTTCCCATTTACTCAAAA +
Preference number: 4 (lower is better)
Translates to: PCGKVGGKRPKSVCLLGWLQVQH*LPIYSK
Trigger: TTTTGAGTAAATGGGAAGCCAGTGTTGGACTTGCAG...CCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CGTACAGTGCAGTGGTGGTTCAAGAAGTTTTGCGAAGCAGGCGAGACCCTTGAACTGCAAGTCCAACACTaGCTTCCCATTTACTCAAAA +
Preference number: 4 (lower is better)
Translates to: RTVQWWFKKFCEAGETLELQVQH*LPIYSK
Trigger: TTTTGAGTAAATGGGAAGCCAGTGTTGGACTTGCAG...TTCAAGGGTCTCGCCTGCTTCGCAAAACTTCTTGAACCACCACTGCACTGTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644863.1
CDS-3UTR CCA 90 bp CCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGAAGCATCTCGCAATTTaGATGAAGGCTTTGATCGTC +
Preference number: 4 (lower is better)
Translates to: PCGKVGGKRPKSVCLLGWKHLAI*MKALIV
Trigger: GACGATCAAAGCCTTCATCCAAATTGCGAGATGCTT...CCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GATATAGGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGATCAAGAGTCACACTTaGAAGCTGATTCAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: DIGSLPPLDCTGPLQGWVIKSHT*KLIQFS
Trigger: AGAAAACTGAATCAGCTTCCAAGTGTGACTCTTGAT...CACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTTACAGAGTCCAGCTCTaGGCCTTTTCCGTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGYRVQL*AFSVFK
Trigger: TTTGAAAACGGAAAAGGCCCAGAGCTGGACTCTGTA...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCCCATGTCACCAATGCTaGCACTGGATTTATCACAAA +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFPCHQC*HWIYHK
Trigger: TTTGTGATAAATCCAGTGCCAGCATTGGTGACATGG...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTCAAAAGCCACTTGCTTaGCTTCCTAAGGCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGQKPLA*LPKAFL
Trigger: AAGAAACGCCTTAGGAAGCCAAGCAAGTGGCTTTTG...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CAGGAAATCGCCACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTTTTACACTGCATCTTaGCTGCAGCATGCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: QEIATDLKEHHFLPRVPRFYTAS*LQHASV
Trigger: GACAGAGGCATGCTGCAGCCAAGATGCAGTGTAAAA...CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTTGCAGAAACATTGGCTaGATTAGCAGCATGACAGGT +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGCRNIG*ISSMTG
Trigger: ACCTGTCATGCTGCTAATCCAGCCAATGTTTCTGCA...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTAATCTCCCTGTAGTGTaGCTTTTTGCCTGCTTTACA +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGNLPVV*LFACFT
Trigger: TGTAAAGCAGGCAAAAAGCCACACTACAGGGAGATT...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGAATGGCAGATCTCAGCTaGCCACCACCTGTATCGTCC +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRMADLS*PPPVSS
Trigger: GGACGATACAGGTGGTGGCCAGCTGAGATCTGCCAT...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGTCTGTGTTTCACAGTTaGGCTGGCAGCAATGATTCA +
Preference number: 4 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWSVFHS*AGSNDS
Trigger: TGAATCATTGCTGCCAGCCCAACTGTGAAACACAGA...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGTTTCTTCCGTGGCAATaGGTTGATTCTTTGGCCTTA +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGFLPWQ*VDSLAL
Trigger: TAAGGCCAAAGAATCAACCCATTGCCACGGAAGAAA...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AGATGTATTGGCTTTCTAGCTACCCATGGAGAATTTCAACTTTTGCCTTGTCCCCCAAGGATTGGGATTTaGTCCCTGACCCAGCGAGGT +
Preference number: 4 (lower is better)
Translates to: RCIGFLATHGEFQLLPCPPRIGI*SLTQRG
Trigger: ACCTCGCTGGGTCAGGGACCAAATCCCAATCCTTGG...GGGACAAGGCAAAAGTTGAAATTCTCCATGGGTAGCTAGAAAGCCAATACATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGAGTGAGGAGCTTGGGCTaGTCACTGGAGAGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRVRSLG*SLERVC
Trigger: ACAAACCCTCTCCAGTGACCAGCCCAAGCTCCTCAC...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCATATAAAAAGGCCTTaGCAGGAGGCTGAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGHIKRP*QEAEKE
Trigger: TTCTTTCTCAGCCTCCTGCCAAGGCCTTTTTATATG...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCATATTTTGCTCTGGTTTaGGGTCTTGCCCTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSYFALV*GLALFQ
Trigger: TTGGAAGAGGGCAAGACCCCAAACCAGAGCAAAATA...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CAGGAAATCGCCACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGACCATGTGGAAAAGTTaGGGGAAAGAGACCCAAGTC +
Preference number: 4 (lower is better)
Translates to: QEIATDLKEHHFLPRVPRTMWKS*GKETQV
Trigger: GACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT...CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGCCGGGGATGGCCTGCTaGCTAAGTTGGCAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKPGMAC*LSWQSR
Trigger: TCTGCTTTGCCAACTTAGCCAGCAGGCCATCCCCGG...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCAATTCACATCCCTTTaGAAAAGGGGTCTTATTACA +
Preference number: 4 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFQFTSL*KRGLIT
Trigger: TGTAATAAGACCCCTTTTCCAAAGGGATGTGAATTG...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CAGGAAATCGCCACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGGCCCTGACCATAGTGTaGGGTGAAGGATGTAAAGAA +
Preference number: 4 (lower is better)
Translates to: QEIATDLKEHHFLPRVPRALTIV*GEGCKE
Trigger: TTCTTTACATCCTTCACCCCACACTATGGTCAGGGC...CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTTGGGCTCCTCTAACCTaGCTGATAAACCCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPWAPLT*LINPKR
Trigger: CCTCTTGGGGTTTATCAGCCAGGTTAGAGGAGCCCA...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CAGGAAATCGCCACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGCAGTCCCTCAACCCTTaGCAGTGCTTATTTATACCG +
Preference number: 4 (lower is better)
Translates to: QEIATDLKEHHFLPRVPRQSLNP*QCLFIP
Trigger: CGGTATAAATAAGCACTGCCAAGGGTTGAGGGACTG...CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCATACAGTACATGTTTATaGGGACTCCTAACACAGGGC +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSYSTCL*GLLTQG
Trigger: GCCCTGTGTTAGGAGTCCCCATAAACATGTACTGTA...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTAGTACACCCATTAAGTaGCTCAGAAAAATTGGATTG +
Preference number: 4 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFSTPIK*LRKIGL
Trigger: CAATCCAATTTTTCTGAGCCACTTAATGGGTGTACT...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000439151.7
CDS-3UTR CCA 90 bp CCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGTCTCATAATTGCAGGTaGCATTGGTCTGAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: PCGKVGGKRPKSVCLLGWSHNCR*HWSEFP
Trigger: AGGAAACTCAGACCAATGCCACCTGCAATTATGAGA...CCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439151.7
CDS-3UTR CCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGCTTGTTCACTTCCCATaGCCACTTTTACACCATTCT +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGLVHFP*PLLHHS
Trigger: AGAATGGTGTAAAAGTGGCCATGGGAAGTGAACAAG...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439151.7
CDS-3UTR CCA 90 bp AAGGATCTCCAAAAGCCTCCACGTAGTACTGCCGATAGGGCCTCCGGTTGGAAAACATCAGGTTCAAAATaGGTCATAAAGCAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: KDLQKPPRSTADRASGWKTSGSK*VIKQWR
Trigger: TCTCCACTGCTTTATGACCCATTTTGAACCTGATGT...TTTCCAACCGGAGGCCCTATCGGCAGTACTACGTGGAGGCTTTTGGAGATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644863.1
CDS-3UTR TCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTACATTTTCGGTTCTTTaGCCCCTTGGGAACATCATA +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGTFSVL*PLGNII
Trigger: TATGATGTTCCCAAGGGGTCAAAGAACCGAAAATGT...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCACTGTCCAACTTGATTaGACCAGGAATACATTTTCG +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFTVQLD*TRNTFS
Trigger: CGAAAATGTATTCCTGGTTCAATCAAGTTGGACAGT...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGACTGTCCAACTTGATTaGACCAGGAATACATTTTCG +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGTVQLD*TRNTFS
Trigger: CGAAAATGTATTCCTGGTTCAATCAAGTTGGACAGT...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGCTTCACTGTCCAACTTaGTTGAACCAGGAATACATT +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWLHCPT*LNQEYI
Trigger: AATGTATTCCTGGTTCAATCAAGTTGGACAGTGAAG...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGACAGTGTTGGACCCTGTaGGGCTATTTGCTATCCTGG +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRQCWTL*GYLLSW
Trigger: CCAGGATAGCAAATAGCCTCACAGGGTCCAACACTG...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTCTTTACCATTTGGGCTaGAAAAGCATCTCGCAATTT +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGLYHLG*KSISQF
Trigger: AAATTGCGAGATGCTTTTTCAGCCCAAATGGTAAAG...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCTTTACCATTTGGGCTaGAAAAGCATCTCGCAATTT +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGLYHLG*KSISQF
Trigger: AAATTGCGAGATGCTTTTTCAGCCCAAATGGTAAAG...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CAGGAAATCGCCACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGGTCACACTTGGAAGCTaGTTCAGTTTTCTTTTGCGC +
Preference number: 4 (lower is better)
Translates to: QEIATDLKEHHFLPRVPRVTLGS*FSFLLR
Trigger: GCGCAAAAGAAAACTGAATCAGCTTCCAAGTGTGAC...CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CAGGAAATCGCCACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGAAGTGGCCCATTATCTaGAGGGGATCCTCTTTACTA +
Preference number: 4 (lower is better)
Translates to: QEIATDLKEHHFLPRVPRKWPII*RGSSLL
Trigger: TAGTAAAGAGGATCCCCTTCAGATAATGGGCCACTT...CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CAGGAAATCGCCACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTCTAAGCAGTCAGCATaGTTTTGCTCTGTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: QEIATDLKEHHFLPRVPRSKQSA*FCSVSG
Trigger: ACCACTGACAGAGCAAAATCATGCTGACTGCTTAGA...CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTGACATTTTGGGTGCCTaGGCAGCCATTCCTGTTGAT +
Preference number: 4 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPDILGA*AAIPVD
Trigger: ATCAACAGGAATGGCTGCTCAGGCACCCAAAATGTC...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTGCTTTCCCAGATGTCTaGAGAGGATCTGACACACAG +
Preference number: 4 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPAFPDV*RGSDTQ
Trigger: CTGTGTGTCAGATCCTCTTCAGACATCTGGGAAAGC...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGCTTTTTATTTCACGATaGCCATGTGGAAAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: PCGKVGGKRPKSVCLLGWLFISR*PCGKVG
Trigger: CCCAACTTTTCCACATGGTCATCGTGAAATAAAAAG...CCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACCTTTTTATTTCACGATaGCCATGTGGAAAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: KALESRLTGMRPVSLISDLFISR*PCGKVG
Trigger: CCCAACTTTTCCACATGGTCATCGTGAAATAAAAAG...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GCACATACCCAAATACCACCCTGCGTTAAGGACCAGAAGTTTTCTAAGATGAAACTGGTCAAAGGTTCCTaGAAGCCTTGGAATCCAGGC +
Preference number: 4 (lower is better)
Translates to: AHTQIPPCVKDQKFSKMKLVKGS*KPWNPG
Trigger: GCCTGGATTCCAAGGCTTTCAGGAACCTTTGACCAG...TTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CAGGAAATCGCCACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGAGACTGCTGTCAAGTTaGTTACCTACCAAAGCCTAC +
Preference number: 4 (lower is better)
Translates to: QEIATDLKEHHFLPRVPRRLLSS*LPTKAY
Trigger: GTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCT...CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CAGGAAATCGCCACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGGTCCATCCATTCAGATaGAGAACTGCTCCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: QEIATDLKEHHFLPRVPRVHPFR*RTAPQN
Trigger: ATTTTGGGGAGCAGTTCTTCATCTGAATGGATGGAC...CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTAATAACCTGATGTTTTaGAAGCCATGGGAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVNNLMF*KPWESS
Trigger: GCTGCTTTCCCATGGCTTTCAAAACATCAGGTTATT...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCAACCCTGGAAGTTaGAAACATAGAACCATTTAT +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGPNPGS*KHRTIY
Trigger: ATAAATGGTTCTATGTTTTCAACTTCCAGGGTTGGG...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCAAACAATTGGCGTCTaGGCTCTTGAATCACTTTTT +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGQTIGV*ALESLF
Trigger: AAAAAGTGATTCAAGAGCTCAGACGCCAATTGTTTG...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439151.7
CDS-3UTR GCA 90 bp ACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTGCCCTCAATGGGCGTCTCTTGAATTTTaGCCAGATGAGATCTCCAAC +
Preference number: 4 (lower is better)
Translates to: TDLKEHHFLPRVPRCPQWASLEF*PDEISN
Trigger: GTTGGAGATCTCATCTGGGCAAAATTCAAGAGACGC...CCATTGAGGGCACCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GTTGACATCAGGTTCAAAATGGGTCATAAAGCAGTGGAGACAATTCACAACATCGATCAGAACAAATCCTaGAGGGCCACCATGGGCGTC +
Preference number: 4 (lower is better)
Translates to: VDIRFKMGHKAVETIHNIDQNKS*RATMGV
Trigger: GACGCCCATGGTGGCCCTGCAGGATTTGTTCTGATC...GATGTTGTGAATTGTCTCCACTGCTTTATGACCCATTTTGAACCTGATGTCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644863.1
CDS-3UTR GCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAAACATCATACTGTTCTaGAAGTCCAACACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSNIILF*KSNTGF
Trigger: GAAGCCAGTGTTGGACTTGCAGAACAGTATGATGTT...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGAGTTCATTAGAGGCCTaGGTATCAGATATATCCCCA +
Preference number: 4 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLSSLEA*VSDISP
Trigger: TGGGGATATATCTGATACGCAGGCCTCTAATGAACT...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCACCCTGTGAGGCTATTTaGTATCCTGGAAAGTTCATT +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSPCEAI*YPGKFI
Trigger: AATGAACTTTCCAGGATAGCAAATAGCCTCACAGGG...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGCTTTTCCTCATCACCTaGTCCAATATAGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLLFLIT*SNIAEL
Trigger: AAGCTCTGCTATATTGGAGCAGGTGATGAGGAAAAG...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCTTTTCCTCATCACCTaGTCCAATATAGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVLFLIT*SNIAEL
Trigger: AAGCTCTGCTATATTGGAGCAGGTGATGAGGAAAAG...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp TTGAGATCAAAGCACCCTCAGGCAAGCCCAATAAAGAGTCACCATTTGAAGTCTTGGGATCCAGGTCACTaGTTCCATCATCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: LRSKHPQASPIKSHHLKSWDPGH*FHHQKW
Trigger: CCACTTCTGATGATGGAAGCAGTGACCTGGATCCCA...AGACTTCAAATGGTGACTCTTTATTGGGCTTGCCTGAGGGTGCTTTGATCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638627.2
CDS-3UTR GCA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACGAGAGGCTTCTGTTTTaGTTTTACCCTAGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: KALESRLTGMRPVSLISDERLLF*FYPSVC
Trigger: ACAAACACTAGGGTAAAAGCAAAACAGAAGCCTCTC...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGGAACTTGGGCTGTTTaGTTTTCGAATGTAATAGAG +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGGTWAV*FSNVIE
Trigger: CTCTATTACATTCGAAAAGCAAACAGCCCAAGTTCC...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTTCCCTGGTTTTCTCATaGATATTGTTCAGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFSLVFS*ILFSSF
Trigger: AAAACTACTGAACAATATGCATGAGAAAACCAGGGA...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGGATTCAGTTTTCTTTTaGGCTCGGTCTTTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGDSVFF*ARSLRL
Trigger: AAGCCTTAAAGACCGAGCGCAAAAGAAAACTGAATC...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTGCTGAAGGAGTTCTATaGTCTGGAAACTCATCCCGC +
Preference number: 4 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPAEGVL*SGNSSR
Trigger: GCGGGATGAGTTTCCAGAGCATAGAACTCCTTCAGC...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTTTTCCATGTCACCAATaGTGGCACTGGATTTATCAC +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGFPCHQ*WHWIYH
Trigger: GTGATAAATCCAGTGCCAGCATTGGTGACATGGAAA...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGAACAGACAAGGTCAGCTaGGGCAACTCAGCATGTCCA +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRTDKVS*GNSACP
Trigger: TGGACATGCTGAGTTGCCGCAGCTGACCTTGTCTGT...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCACATCTTCCCCACTCTaGTTACATACAAAACAGGTA +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFTSSPL*LHTKQV
Trigger: TACCTGTTTTGTATGTAAGCAGAGTGGGGAAGATGT...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCATGTAGTGTGGCTTTTTaGCTGCTTTACAGTCATTGC +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSCSVAF*LLYSHC
Trigger: GCAATGACTGTAAAGCAGGCAAAAAGCCACACTACA...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGTGTAGTGTGGCTTTTTaGCTGCTTTACAGTCATTGC +
Preference number: 4 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLCSVAF*LLYSHC
Trigger: GCAATGACTGTAAAGCAGGCAAAAAGCCACACTACA...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AGATGTATTGGCTTTCTAGCTACCCATGGAGAATTTCAACTTTTGCCTTGTCCCTTTCACCCTGGGTCCTaGGCTTTCCCTGTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: RCIGFLATHGEFQLLPCPFHPGS*AFPVAS
Trigger: AGAAGCAACAGGGAAAGCGCAGGACCCAGGGTGAAA...GGGACAAGGCAAAAGTTGAAATTCTCCATGGGTAGCTAGAAAGCCAATACATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CACAGTGATTTAAGTCATCTCAAACTCAGTAACAGGGTAAAGCAGACATTTAAAAACTCAGGACAGCCCTaGCCAGCCTCGTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: HSDLSHLKLSNRVKQTFKNSGQP*PASSLC
Trigger: GCAGAGGGACGAGGCTGGGCAGGGCTGTCCTGAGTT...TTTAAATGTCTGCTTTACCCTGTTACTGAGTTTGAGATGACTTAAATCACTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACGTCTACACATGGAACTaGTCAAATGAAACTCAGCAA +
Preference number: 4 (lower is better)
Translates to: KALESRLTGMRPVSLISDVYTWN*SNETQQ
Trigger: TTGCTGAGTTTCATTTGAGCAGTTCCATGTGTAGAC...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CACAGTGATTTAAGTCATCTCAAACTCAGTAACAGGGTAAAGCAGACATTTAAATCGATGAGACCGCCTTaGTCTGGCCTGCCCCAACCC +
Preference number: 4 (lower is better)
Translates to: HSDLSHLKLSNRVKQTFKSMRPP*SGLPQP
Trigger: GGGTTGGGGCAGGCCAGAGCAAGGCGGTCTCATCGA...TTTAAATGTCTGCTTTACCCTGTTACTGAGTTTGAGATGACTTAAATCACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CAAATCCTGCAGGGCCACCATGGGCGTCTCTTGAATTTTGCCCAGATGAGATCTCTAATGTACTGGTACTaGAATCTGGATCATCCGAAA +
Preference number: 4 (lower is better)
Translates to: QILQGHHGRLLNFAQMRSLMYWY*NLDHPK
Trigger: TTTCGGATGATCCAGATTCCAGTACCAGTACATTAG...AGATCTCATCTGGGCAAAATTCAAGAGACGCCCATGGTGGCCCTGCAGGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR CCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGGATAGGGCCTCCGGTTaGAAACTTTCATTTTTGAAT +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWDRASG*KLSFLN
Trigger: ATTCAAAAATGAAAGTTTCCAACCGGAGGCCCTATC...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGGCTTCAAATTGTATGTaGCCCTTTTTCACACTAGTC +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGASNCM*PFFTLV
Trigger: GACTAGTGTGAAAAAGGGCCACATACAATTTGAAGC...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TTCTCTCGAGAACACTTTGAGATCAAAGCACCCTCAGGCAAGCCCAATAAAGAGAAACAGAAAACTTCCTaGGGCAGTGTTGGACCCTGT +
Preference number: 4 (lower is better)
Translates to: FSREHFEIKAPSGKPNKEKQKTS*GSVGPC
Trigger: ACAGGGTCCAACACTGCCCCAGGAAGTTTTCTGTTT...CTCTTTATTGGGCTTGCCTGAGGGTGCTTTGATCTCAAAGTGTTCTCGAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638627.2
CDS-3UTR CCA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACTTAACGAGTTCTCACTaGATATGCTTGATGACAGGT +
Preference number: 4 (lower is better)
Translates to: KALESRLTGMRPVSLISDLTSSH*ICLMTG
Trigger: ACCTGTCATCAAGCATATCCAGTGAGAACTCGTTAA...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGGGGTTCTGCCATAACTaGATTTTCTTTGTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWGFCHN*IFFVFA
Trigger: TGCAAACACAAAGAAAATCCAGTTATGGCAGAACCC...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCGGGTTCTGCCATAACTaGATTTTCTTTGTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFGFCHN*IFFVFA
Trigger: TGCAAACACAAAGAAAATCCAGTTATGGCAGAACCC...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTCCATGTCACCAATGCTaGCACTGGATTTATCACAAA +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGPCHQC*HWIYHK
Trigger: TTTGTGATAAATCCAGTGCCAGCATTGGTGACATGG...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTCCATGTCACCAATGCTaGCACTGGATTTATCACAAA +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVPCHQC*HWIYHK
Trigger: TTTGTGATAAATCCAGTGCCAGCATTGGTGACATGG...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TCCCCCTTCTTGGGCATAAATCCAGGGTCTAAATCATTGGATTCAAGAAGTTTCAGGGAGCTCAGCCTGTaGTGTCAAACTGGGAATTCC +
Preference number: 4 (lower is better)
Translates to: SPFLGINPGSKSLDSRSFRELSL*CQTGNS
Trigger: GGAATTCCCAGTTTGACACCACAGGCTGAGCTCCCT...GAAACTTCTTGAATCCAATGATTTAGACCCTGGATTTATGCCCAAGAAGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375350.3
CDS-3UTR CCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTCGTTTTCGCTTCCTTaGCTTGTCAAATATCTTGGT +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWSFSLP*LVKYLG
Trigger: ACCAAGATATTTGACAAGCCAAGGAAGCGAAAACGA...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGTCATCTTATCAATGTTaGAAGGAACAGCTCGAGGAT +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGSSYQC*KEQLED
Trigger: ATCCTCGAGCTGTTCCTTCCAACATTGATAAGATGA...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGTTGACTTTTCTTCCGTaGCAATGGGTTGATTCTTTG +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGLTFLP*QWVDSL
Trigger: CAAAGAATCAACCCATTGCCACGGAAGAAAAGTCAA...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGCCAGTGGCCTCTGGCTaGAAACCAAGGATTGGGATT +
Preference number: 4 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVPVASG*KPRIGI
Trigger: AATCCCAATCCTTGGTTTCCAGCCAGAGGCCACTGG...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGGGTTTGTCGCTTAGCTaGGGTCTTGGTCCTGCCACT +
Preference number: 4 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKGLSLS*GLGPAT
Trigger: AGTGGCAGGACCAAGACCCCAGCTAAGCGACAAACC...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGATGGGACAAAGAGGCATaGGGTTTGTCAGTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRWDKEA*GLSVGL
Trigger: CAGGCCTACTGACAAACCCCATGCCTCTTTGTCCCA...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGTGGGACAAAGAGGCATaGGGTTTGTCAGTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVWDKEA*GLSVGL
Trigger: CAGGCCTACTGACAAACCCCATGCCTCTTTGTCCCA...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CAGGAAATCGCCACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTTCACGATGACCATGTaGAAAAGTTGGGGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: QEIATDLKEHHFLPRVPRFTMTM*KSWGKE
Trigger: CTCTTTCCCCCAACTTTTCCACATGGTCATCGTGAA...CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TGTCCTGTGAGACATCTAGACTGCTGTCAAGTTGATTACCTACCAAAGCCTACTCTAGTTCCCATTCAATaGCCCTTGAAGGAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: CPVRHLDCCQVDYLPKPTLVPIQ*PLKEAQ
Trigger: CTGGGCTTCCTTCAAGGGCCATTGAATGGGAACTAG...AGTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCTAGATGTCTCACAGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CAGGAAATCGCCACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGGCTATTAGACTGGGTTaGCTCCAGCAAGATAAGCAA +
Preference number: 4 (lower is better)
Translates to: QEIATDLKEHHFLPRVPRAIRLG*LQQDKQ
Trigger: TTGCTTATCTTGCTGGAGCCAACCCAGTCTAATAGC...CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGATTTTGCTATTAGACTaGGTTGGCTCCAGCAAGATA +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGILLLD*VGSSKI
Trigger: TATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAAT...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTCTTCTTCCGAGGTTGTaGATTTCTAGTTTAATTCTT +
Preference number: 4 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFLLPRL*ISSLIL
Trigger: AAGAATTAAACTAGAAATCCACAACCTCGGAAGAAG...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CAA 72 bp CTAGAACACGTGAATGCTCAGGAAATCGCCACTGATTaGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: LEHVNAQEIATD*KEHHFLPRVPR
Trigger: CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTGAGCATTCACGTGTTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CAA 72 bp GGCTTCGTTGGGGTTTATTCTTCTCTCGAGAACACTTaGAGATCAAAGCACCCTCAGGCAAGCCCAATAAAG +
Preference number: 4 (lower is better)
Translates to: GFVGVYSSLENT*RSKHPQASPIK
Trigger: CTTTATTGGGCTTGCCTGAGGGTGCTTTGATCTCAAAGTGTTCTCGAGAGAAGAATAAACCCCAACGAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638627.2
3UTR CAA 72 bp CCTCATCACCTGCTCCAATATAGCAGAGCTTCACTTTaGAACCACACACCAGGCTTCGTTGGGGTTTATTCT +
Preference number: 4 (lower is better)
Translates to: PHHLLQYSRASL*NHTPGFVGVYS
Trigger: AGAATAAACCCCAACGAAGCCTGGTGTGTGGTTCAAAAGTGAAGCTCTGCTATATTGGAGCAGGTGATGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638627.2
CDS-3UTR TCA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGACTGTCCAACTTGATTaGACCAGGAATACATTTTCG +
Preference number: 4 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWTVQLD*TRNTFS
Trigger: CGAAAATGTATTCCTGGTTCAATCAAGTTGGACAGT...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTAGAATCAAAAGCCAGTaGTTTCAAACAGCCATTAAG +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGRIKSQ*FQTAIK
Trigger: CTTAATGGCTGTTTGAAATCACTGGCTTTTGATTCT...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CTGCCTTCAAACATGACGATTGCTTTTCCAGCCACCCAGGCTCTCTCAGAAGGAAGAATCAAAAGCCAGTaGTTTCAAACAGCCATTAAG +
Preference number: 4 (lower is better)
Translates to: LPSNMTIAFPATQALSEGRIKSQ*FQTAIK
Trigger: CTTAATGGCTGTTTGAAATCACTGGCTTTTGATTCT...TCCTTCTGAGAGAGCCTGGGTGGCTGGAAAAGCAATCGTCATGTTTGAAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR TCA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGCAGTGTTGGACCCTGTaGGGCTATTTGCTATCCTGG +
Preference number: 4 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKQCWTL*GYLLSW
Trigger: CCAGGATAGCAAATAGCCTCACAGGGTCCAACACTG...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GGTCATGTTCTGACTCAGGATCATTTGTGCAGTCTTCAAATGGCATATCTTCTTCAGTGTTGGACCCTGTaGGGCTATTTGCTATCCTGG +
Preference number: 4 (lower is better)
Translates to: GHVLTQDHLCSLQMAYLLQCWTL*GYLLSW
Trigger: CCAGGATAGCAAATAGCCTCACAGGGTCCAACACTG...AAGAAGATATGCCATTTGAAGACTGCACAAATGATCCTGAGTCAGAACATGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638627.2
CDS-3UTR TCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGACTCTCGAGAACACTTTaGGATCAAAGCACCCTCAGG +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRLSRTL*DQSTLR
Trigger: CCTGAGGGTGCTTTGATCTCAAAGTGTTCTCGAGAG...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp TTGGGAACATCATACTGTTCTGCAAGTCCAACACTGGCTTCCCATTTACTCAAACTCTCGAGAACACTTTaGGATCAAAGCACCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LGTSYCSASPTLASHLLKLSRTL*DQSTLR
Trigger: CCTGAGGGTGCTTTGATCTCAAAGTGTTCTCGAGAG...TTTGAGTAAATGGGAAGCCAGTGTTGGACTTGCAGAACAGTATGATGTTCCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638627.2
CDS-3UTR TCA 90 bp TGTCCTGTGAGACATCTAGACTGCTGTCAAGTTGATTACCTACCAAAGCCTACTTCTGACTGGGGTTTGTaGACAAGAGTAGATGCCTTC +
Preference number: 4 (lower is better)
Translates to: CPVRHLDCCQVDYLPKPTSDWGL*TRVDAF
Trigger: GAAGGCATCTACTCTTGTTCACAAACCCCAGTCAGA...AGTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCTAGATGTCTCACAGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTTCTGACTGGGGTTTGTaGACAAGAGTAGATGCCTTC +
Preference number: 4 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPSDWGL*TRVDAF
Trigger: GAAGGCATCTACTCTTGTTCACAAACCCCAGTCAGA...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GCACATACCCAAATACCACCCTGCGTTAAGGACCAGAAGTTTTCTAAGATGAAAGTGTGTGGAGCCTCCTaGAACCAAAACCTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: AHTQIPPCVKDQKFSKMKVCGAS*NQNLRD
Trigger: GTCTCTAAGGTTTTGGTTTCAGGAGGCTCCACACAC...TTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACCTTGATTTACACCATTaGGTTCATCATTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: KALESRLTGMRPVSLISDLDLHH*VHHSHC
Trigger: ACAGTGAGAATGATGAACTCAATGGTGTAAATCAAG...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGAGGCTCTTCTTTGGTTaGAATCAAAGAATTCTCGTC +
Preference number: 4 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLRLFFG*NQRILV
Trigger: GACGAGAATTCTTTGATTTCAACCAAAGAAGAGCCT...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTCAGATAAGTCTGCAGTaGAGATCTGTACCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPQISLQ*RSVPCQ
Trigger: TTGGCAGGGTACAGATCTTCACTGCAGACTTATCTG...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGAGCAGCCATTCCTGTTaGTTGCTCTGCCAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKSSHSC*LLCQVS
Trigger: ACTCACCTGGCAGAGCAATCAACAGGAATGGCTGCT...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CAGGAAATCGCCACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGGTACTACTTCTGTTCTaGTTCTGCACACTTGTGACT +
Preference number: 4 (lower is better)
Translates to: QEIATDLKEHHFLPRVPRVLLLF*FCTLVT
Trigger: AGTCACAAGTGTGCAGAATCAGAACAGAAGTAGTAC...CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTAATACAGAATCCTATTaGGAGCGTGAAAGCCATAAC +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVNTESY*ERESHN
Trigger: GTTATGGCTTTCACGCTCTCAATAGGATTCTGTATT...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGCCATTCAATGGCCCTTaGAGGAAGCCCAGATGTCCA +
Preference number: 4 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKPFNGP*RKPRCP
Trigger: TGGACATCTGGGCTTCCTTCAAGGGCCATTGAATGG...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTAGAGGGTCAACACAGTaGTTTAAGTCATCTCAAACT +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVRGSTQ*FKSSQT
Trigger: AGTTTGAGATGACTTAAATCACTGTGTTGACCCTCT...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CACAGTGATTTAAGTCATCTCAAACTCAGTAACAGGGTAAAGCAGACATTTAAAGGAACCCGGGTTTCTTaGGCTGCCAGTCCCTCAACC +
Preference number: 4 (lower is better)
Translates to: HSDLSHLKLSNRVKQTFKGTRVS*AASPST
Trigger: GGTTGAGGGACTGGCAGCTCAAGAAACCCGGGTTCC...TTTAAATGTCTGCTTTACCCTGTTACTGAGTTTGAGATGACTTAAATCACTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCCTTCTTGGGCATAAATCCAGGGTCTAAATCATTGGATTCAAGAAGTTTCTTAGACAGGAGAATCACTTaGACCTGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: PFLGINPGSKSLDSRSFLDRRIT*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGTC...TAAGAAACTTCTTGAATCCAATGATTTAGACCCTGGATTTATGCCCAAGAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375350.3
CDS-3UTR TCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGTTAAATACTCTACATTaGTCATGGAGGCCAAATCCT +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGLNTLH*SWRPNP
Trigger: AGGATTTGGCCTCCATGATCAATGTAGAGTATTTAA...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439151.7
CDS-3UTR TCA 90 bp GCACATACCCAAATACCACCCTGCGTTAAGGACCAGAAGTTTTCTAAGATGAAACAGGTGGCATTGGTCTaGGTTTCCTCAAAGATCTCC +
Preference number: 4 (lower is better)
Translates to: AHTQIPPCVKDQKFSKMKQVALV*VSSKIS
Trigger: GGAGATCTTTGAGGAAACTCAGACCAATGCCACCTG...TTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439151.7
CDS-3UTR GCA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTTTCAAACATGACGATTaGTTTTCCAGCCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPFKHDD*FSSHPG
Trigger: GCCTGGGTGGCTGGAAAAGCAATCGTCATGTTTGAA...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTGCCCTCAATGGAGTTCATTAGAGGCCTaGGTATCAGATATATCCCCA +
Preference number: 4 (lower is better)
Translates to: TDLKEHHFLPRVPRCPQWSSLEA*VSDISP
Trigger: TGGGGATATATCTGATACGCAGGCCTCTAATGAACT...CCATTGAGGGCACCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCCTTGGGAACATCATACTGTTCTGCAAGTCCAACACTGGCTTCCCATTTACTCAGTTCATTAGAGGCCTaGGTATCAGATATATCCCCA +
Preference number: 4 (lower is better)
Translates to: PLGTSYCSASPTLASHLLSSLEA*VSDISP
Trigger: TGGGGATATATCTGATACGCAGGCCTCTAATGAACT...GAGTAAATGGGAAGCCAGTGTTGGACTTGCAGAACAGTATGATGTTCCCAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR GCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGATGGGATCCAGGTCACTaGTTCCATCATCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRWDPGH*FHHQKW
Trigger: CCACTTCTGATGATGGAAGCAGTGACCTGGATCCCA...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGTGGGATCCAGGTCACTaGTTCCATCATCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVWDPGH*FHHQKW
Trigger: CCACTTCTGATGATGGAAGCAGTGACCTGGATCCCA...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTGTGAACAAGAGTAGATaGCTTCAGATCAGAGAGATT +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGVNKSR*LQIREI
Trigger: AATCTCTCTGATCTGAAGGCATCTACTCTTGTTCAC...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGGTGAACAAGAGTAGATaGCTTCAGATCAGAGAGATT +
Preference number: 4 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWVNKSR*LQIREI
Trigger: AATCTCTCTGATCTGAAGGCATCTACTCTTGTTCAC...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACTATAACTGGGGGTTCTaGCATAACTGGATTTTCTTT +
Preference number: 4 (lower is better)
Translates to: KALESRLTGMRPVSLISDYNWGF*HNWIFF
Trigger: AAAGAAAATCCAGTTATGGCAGAACCCCCAGTTATA...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTGATTCAGTTTTCTTTTaGGCTCGGTCTTTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGDSVFF*ARSLRL
Trigger: AAGCCTTAAAGACCGAGCGCAAAAGAAAACTGAATC...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTTACCAGGATCAGATTaGTTAACCTTGCTATCGAAA +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGLPGSD*LTLLSK
Trigger: TTTCGATAGCAAGGTTAAGCAATCTGATCCTGGTAA...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GCACATACCCAAATACCACCCTGCGTTAAGGACCAGAAGTTTTCTAAGATGAAAATCTTGGCTGCAGCATaGCTCTGTCGTTTTCGCTTC +
Preference number: 4 (lower is better)
Translates to: AHTQIPPCVKDQKFSKMKILAAA*LCRFRF
Trigger: GAAGCGAAAACGACAGAGGCATGCTGCAGCCAAGAT...TTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGAACACTGCATCTTGGCTaGAGCATGCCTCTGTCGTTT +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRTLHLG*SMPLSF
Trigger: AAACGACAGAGGCATGCTGCAGCCAAGATGCAGTGT...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGACCATCTTATCCTTGCTaGTCACGTCACCCTCCATGT +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRPSYPC*SRHPPC
Trigger: ACATGGAGGGTGACGTGAGCAGCAAGGATAAGATGG...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CACAGTGATTTAAGTCATCTCAAACTCAGTAACAGGGTAAAGCAGACATTTAAATGGCCTCCGACCATCTaGTTCGCCTGCTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: HSDLSHLKLSNRVKQTFKWPPTI*FACFTR
Trigger: CCTGGTGAAGCAGGCGAAGCAGATGGTCGGAGGCCA...TTTAAATGTCTGCTTTACCCTGTTACTGAGTTTGAGATGACTTAAATCACTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTAGAGACCTAAAAGATTaGCCACTCTTGGCGGCAAGT +
Preference number: 4 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPRDLKD*PLLAAS
Trigger: ACTTGCCGCCAAGAGTGGGCAATCTTTTAGGTCTCT...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTCTGATCTTGAGACTCTaGACAGCCCAGACAAAAGCA +
Preference number: 4 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPLILRL*TAQTKA
Trigger: TGCTTTTGTCTGGGCTGTGCAGAGTCTCAAGATCAG...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTGCCCTCAATGGACTCTGACAGTGCAGTaGAGATACCTTTTTCTGATC +
Preference number: 4 (lower is better)
Translates to: TDLKEHHFLPRVPRCPQWTLTVQ*RYLFLI
Trigger: GATCAGAAAAAGGTATCTGCACTGCACTGTCAGAGT...CCATTGAGGGCACCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp TGTCCTGTGAGACATCTAGACTGCTGTCAAGTTGATTACCTACCAAAGCCTACTTGCTTCTACTCTCTGTaGCCATGTCTTGTCCACGAA +
Preference number: 4 (lower is better)
Translates to: CPVRHLDCCQVDYLPKPTCFYSL*PCLVHE
Trigger: TTCGTGGACAAGACATGGGCACAGAGAGTAGAAGCA...AGTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCTAGATGTCTCACAGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp TATTCCAAAAGCCACTTGCTTGGCTTCCTAAGGCGTTTCTTCTCTGACCGCACAATTTCCTTGTGCACCTaGTCCTGTACCTTCTTTTGT +
Preference number: 4 (lower is better)
Translates to: YSKSHLLGFLRRFFSDRTISLCT*SCTFFC
Trigger: ACAAAAGAAGGTACAGGAGCAGGTGCACAAGGAAAT...TGTGCGGTCAGAGAAGAAACGCCTTAGGAAGCCAAGCAAGTGGCTTTTGGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375350.3
CDS-3UTR GCA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGGAATGGCGATTTGACTaGACCGTGTCTACTCTCTGG +
Preference number: 4 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVEWRFD*TVSTLW
Trigger: CCAGAGAGTAGACACGGTGCAGTCAAATCGCCATTC...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439151.7
CDS-3UTR CCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCACTAATGTACTGGTACTaGAATCTGGATCATCCGAAA +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSLMYWY*NLDHPK
Trigger: TTTCGGATGATCCAGATTCCAGTACCAGTACATTAG...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347982.8
ENST00000354179.8
CDS-3UTR CCA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTGTTTCCTAATGTACTaGTACTGGAATCTGGATCAT +
Preference number: 4 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGCFLMY*YWNLDH
Trigger: ATGATCCAGATTCCAGTACCAGTACATTAGGAAACA...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTGATAGGGCCTCCGGTTaGAAACTTTCATTTTTGAAT +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGDRASG*KLSFLN
Trigger: ATTCAAAAATGAAAGTTTCCAACCGGAGGCCCTATC...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACCCCTTGGGAACATCATACTGTTCTGCAAGTCCAACACTGGCTTCCCATTTACCTGCAAGTCCAACACTaGCTTCCCATTTACTCAAAA +
Preference number: 4 (lower is better)
Translates to: TPWEHHTVLQVQHWLPIYLQVQH*LPIYSK
Trigger: TTTTGAGTAAATGGGAAGCCAGTGTTGGACTTGCAG...GTAAATGGGAAGCCAGTGTTGGACTTGCAGAACAGTATGATGTTCCCAAGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR CCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAGCTTCAAATTGTATGTaGCCCTTTTTCACACTAGTC +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSASNCM*PFFTLV
Trigger: GACTAGTGTGAAAAAGGGCCACATACAATTTGAAGC...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGTCTATCGAAAGCATCTaGAATTTCAAGGACACTGTT +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGSIESI*NFKDTV
Trigger: AACAGTGTCCTTGAAATTCCAGATGCTTTCGATAGA...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCGTACAACCCATTAAGTaGTCTGTATGTGAGTTACTA +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFVQPIK*SVCELL
Trigger: TAGTAACTCACATACAGACCACTTAATGGGTTGTAC...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CAGGAAATCGCCACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTCTCTGAATTGTGTGTaGAGCCTCCTGAAACCAAAA +
Preference number: 4 (lower is better)
Translates to: QEIATDLKEHHFLPRVPRSLNCV*SLLKPK
Trigger: TTTTGGTTTCAGGAGGCTCCACACACAATTCAGAGA...CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGATCAAGAGTCACACTTaGAAGCTGATTCAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGIKSHT*KLIQFS
Trigger: AGAAAACTGAATCAGCTTCCAAGTGTGACTCTTGAT...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCCACCAATGCTGGCACTaGATTTATCACAAACATTTA +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFHQCWH*IYHKHL
Trigger: TAAATGTTTGTGATAAATCCAGTGCCAGCATTGGTG...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGCACCAATGCTGGCACTaGATTTATCACAAACATTTA +
Preference number: 4 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGHQCWH*IYHKHL
Trigger: TAAATGTTTGTGATAAATCCAGTGCCAGCATTGGTG...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGGATAAATTTTCCTCTTaGCATCTCAGTCAATCCAAG +
Preference number: 4 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGDKFSS*HLSQSK
Trigger: CTTGGATTGACTGAGATGCCAAGAGGAAAATTTATC...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGGATAAATTTTCCTCTTaGCATCTCAGTCAATCCAAG +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWDKFSS*HLSQSK
Trigger: CTTGGATTGACTGAGATGCCAAGAGGAAAATTTATC...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTCATACAAAACAGGTATaGATTCCTGTGCGACATTCA +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVHTKQV*IPVRHS
Trigger: TGAATGTCGCACAGGAATCCATACCTGTTTTGTATG...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCTGTCTTAGCTCTTTTTaGGCCTTTAATTCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFCLSSF*AFNSSN
Trigger: GTTTGAGGAATTAAAGGCCCAAAAAGAGCTAAGACA...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCGAAAATTTCAACCTCTaGATATTGGCGCTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFENFNL*ILALGK
Trigger: TTTTCCAAGCGCCAATATCCAGAGGTTGAAATTTTC...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACGAAAATTTCAACCTCTaGATATTGGCGCTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: KALESRLTGMRPVSLISDENFNL*ILALGK
Trigger: TTTTCCAAGCGCCAATATCCAGAGGTTGAAATTTTC...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCATTGACTTTTCTTCCGTaGCAATGGGTTGATTCTTTG +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSLTFLP*QWVDSL
Trigger: CAAAGAATCAACCCATTGCCACGGAAGAAAAGTCAA...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGAAACTTTTGGGCAGCCTaGTTTCTTGCAGGAGACGAG +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRNFWAA*FLAGDE
Trigger: CTCGTCTCCTGCAAGAAACCAGGCTGCCCAAAAGTT...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGAGCTTACAAAAGGAGCTaGGGCACATCTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRAYKRS*GTSHRR
Trigger: CCTTCTGTGAGATGTGCCCCAGCTCCTTTTGTAAGC...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AGATGTATTGGCTTTCTAGCTACCCATGGAGAATTTCAACTTTTGCCTTGTCCCGCGACAGCATCTGGTTaGTGTCAGCAGGAGGTTTAT +
Preference number: 4 (lower is better)
Translates to: RCIGFLATHGEFQLLPCPATASG*CQQEVY
Trigger: ATAAACCTCCTGCTGACACCAACCAGATGCTGTCGC...GGGACAAGGCAAAAGTTGAAATTCTCCATGGGTAGCTAGAAAGCCAATACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GCACATACCCAAATACCACCCTGCGTTAAGGACCAGAAGTTTTCTAAGATGAAAACCTTATCTAAAGGCTaGGGCCTGGAGTCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: AHTQIPPCVKDQKFSKMKTLSKG*GLESVL
Trigger: GAGAACTGACTCCAGGCCCCAGCCTTTAGATAAGGT...TTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GCACATACCCAAATACCACCCTGCGTTAAGGACCAGAAGTTTTCTAAGATGAAAGAAGTCTCAGGCCAGTaGGAACTGAGGTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: AHTQIPPCVKDQKFSKMKEVSGQ*ELRFSP
Trigger: TGGAGAAAACCTCAGTTCCCACTGGCCTGAGACTTC...TTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTACCATAAGCCCCCACTaGCTAATGTCACAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPTISPH*LMSQEF
Trigger: GAACTCTTGTGACATTAGCCAGTGGGGGCTTATGGT...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGAAATAGGGATGGGGTaGATTCATGTACAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLEIGMG*IHVQRE
Trigger: TTCTCTTTGTACATGAATCCACCCCATCCCTATTTC...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGCTAGTTCCCATTCAATaGCCCTTGAAGGAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVLVPIQ*PLKEAQ
Trigger: CTGGGCTTCCTTCAAGGGCCATTGAATGGGAACTAG...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTCTTTCTAGCTACCCATaGAGAATTTCAACTTTTGCC +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGLSSYP*RISTFA
Trigger: GGCAAAAGTTGAAATTCTCCATGGGTAGCTAGAAAG...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTCAATGCTAAAGATTTaGTTCAGAAGAGGGTCAACA +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWSMLKI*FRRGST
Trigger: TGTTGACCCTCTTCTGAACCAAATCTTTAGCATTGA...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACCCCTTGGGAACATCATACTGTTCTGCAAGTCCAACACTGGCTTCCCATTTACACTGTCCAACTTGATTaGACCAGGAATACATTTTCG +
Preference number: 4 (lower is better)
Translates to: TPWEHHTVLQVQHWLPIYTVQLD*TRNTFS
Trigger: CGAAAATGTATTCCTGGTTCAATCAAGTTGGACAGT...GTAAATGGGAAGCCAGTGTTGGACTTGCAGAACAGTATGATGTTCCCAAGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR TCA 90 bp TGTCCTGTGAGACATCTAGACTGCTGTCAAGTTGATTACCTACCAAAGCCTACTCAACAGGTCATGTTCTaGCTCAGGATCATTTGTGCA +
Preference number: 4 (lower is better)
Translates to: CPVRHLDCCQVDYLPKPTQQVMF*LRIICA
Trigger: TGCACAAATGATCCTGAGTCAGAACATGACCTGTTG...AGTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCTAGATGTCTCACAGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAATCATTTGTAAAATCTaGCTGGGGTTTGTGAACAAG +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSIICKI*LGFVNK
Trigger: CTTGTTCACAAACCCCAGTCAGATTTTACAAATGAT...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGATCATTTGTAAAATCTaGCTGGGGTTTGTGAACAAG +
Preference number: 4 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWIICKI*LGFVNK
Trigger: CTTGTTCACAAACCCCAGTCAGATTTTACAAATGAT...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTGCCCTCAATGGTGTTTCTATGTCACTTaGATCCCTGGTTTTCTCATG +
Preference number: 4 (lower is better)
Translates to: TDLKEHHFLPRVPRCPQWCFYVT*IPGFLM
Trigger: CATGAGAAAACCAGGGATTCAAGTGACATAGAAACA...CCATTGAGGGCACCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGATCTCCCTTTTTCTCTaGATTGTGTGTGGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVISLFL*IVCGAS
Trigger: GGAGGCTCCACACACAATTCAGAGAAAAAGGGAGAT...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTGCCCTCAATGGCTTTACCATTTGGGCTaGAAAAGCATCTCGCAATTT +
Preference number: 4 (lower is better)
Translates to: TDLKEHHFLPRVPRCPQWLYHLG*KSISQF
Trigger: AAATTGCGAGATGCTTTTTCAGCCCAAATGGTAAAG...CCATTGAGGGCACCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTCTTGATTTACACCATTaGGTTCATCATTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGLDLHH*VHHSHC
Trigger: ACAGTGAGAATGATGAACTCAATGGTGTAAATCAAG...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGTTCAGGCATTCACGATaGAAAGCAGCAGGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVFRHSR*KAAGQE
Trigger: TTCTTGCCCTGCTGCTTTTCATCGTGAATGCCTGAA...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCTTCTTGAATTTCTTTaGCTTTTCTTCCGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVLLEFL*LFFRGN
Trigger: ATTGCCACGGAAGAAAAGTCAAAGAAATTCAAGAAG...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCACTTCTTGAATTTCTTTaGCTTTTCTTCCGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSLLEFL*LFFRGN
Trigger: ATTGCCACGGAAGAAAAGTCAAAGAAATTCAAGAAG...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CACAGTGATTTAAGTCATCTCAAACTCAGTAACAGGGTAAAGCAGACATTTAAATGTGACCTGATGAGGTaGAGCTGCCCGCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: HSDLSHLKLSNRVKQTFKCDLMR*SCPLLL
Trigger: CAGAAGGAGCGGGCAGCTTCACCTCATCAGGTCACA...TTTAAATGTCTGCTTTACCCTGTTACTGAGTTTGAGATGACTTAAATCACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GCACATACCCAAATACCACCCTGCGTTAAGGACCAGAAGTTTTCTAAGATGAAAGCTCTTCCTGAGGCCTaGGTTGTTGGCTCATATAAA +
Preference number: 4 (lower is better)
Translates to: AHTQIPPCVKDQKFSKMKALPEA*VVGSYK
Trigger: TTTATATGAGCCAACAACTCAGGCCTCAGGAAGAGC...TTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGGCTCTTCCTGAGGCCTaGGTTGTTGGCTCATATAAA +
Preference number: 4 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVALPEA*VVGSYK
Trigger: TTTATATGAGCCAACAACTCAGGCCTCAGGAAGAGC...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGACCTGACCAGCGGAATTaGATTCCATACTTGACTCCA +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRPDQRN*IPYLTP
Trigger: TGGAGTCAAGTATGGAATTCAATTCCGCTGGTCAGG...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTACCTCAATAAGAACTTaGGGAAATTGGGACCAAATA +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVTSIRT*GNWDQI
Trigger: TATTTGGTCCCAATTTCCTCAAGTTCTTATTGAGGT...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCTTGGGAACATCATACTGTTCTGCAAGTCCAACACTGGCTTCCCATTTACTCAAACATCATACTGTTCTaGAAGTCCAACACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: PWEHHTVLQVQHWLPIYSNIILF*KSNTGF
Trigger: GAAGCCAGTGTTGGACTTGCAGAACAGTATGATGTT...TGAGTAAATGGGAAGCCAGTGTTGGACTTGCAGAACAGTATGATGTTCCCAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR GCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCATATAACTGGGGGTTCTaGCATAACTGGATTTTCTTT +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSYNWGF*HNWIFF
Trigger: AAAGAAAATCCAGTTATGGCAGAACCCCCAGTTATA...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGTCCCTGGTTTTCTCATaGATATTGTTCAGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: PCGKVGGKRPKSVCLLGWSLVFS*ILFSSF
Trigger: AAAACTACTGAACAATATGCATGAGAAAACCAGGGA...CCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTACCTTGCTATCGAAATaGACATCAGAAAAATGGTCA +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGTLLSK*TSEKWS
Trigger: TGACCATTTTTCTGATGTGCATTTCGATAGCAAGGT...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GCACATACCCAAATACCACCCTGCGTTAAGGACCAGAAGTTTTCTAAGATGAAACTTTGGTTTAAACGCTaGCACCGCTTTTTAGGCACC +
Preference number: 4 (lower is better)
Translates to: AHTQIPPCVKDQKFSKMKLWFKR*HRFLGT
Trigger: GGTGCCTAAAAAGCGGTGGCAGCGTTTAAACCAAAG...TTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGGCTGAAGGAGTTCTATaGTCTGGAAACTCATCCCGC +
Preference number: 4 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKAEGVL*SGNSSR
Trigger: GCGGGATGAGTTTCCAGAGCATAGAACTCCTTCAGC...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AGATGTATTGGCTTTCTAGCTACCCATGGAGAATTTCAACTTTTGCCTTGTCCCACATTCCCATTTCCCTaGTGGTCGCTTGGTCAGATT +
Preference number: 4 (lower is better)
Translates to: RCIGFLATHGEFQLLPCPTFPFP*WSLGQI
Trigger: AATCTGACCAAGCGACCAGCAGGGAAATGGGAATGT...GGGACAAGGCAAAAGTTGAAATTCTCCATGGGTAGCTAGAAAGCCAATACATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGTTCAGAATCTACATCTaGATCGTCCACACAAGTAAA +
Preference number: 4 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLFRIYI*IVHTSK
Trigger: TTTACTTGTGTGGACGATGCAGATGTAGATTCTGAA...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439151.7
CDS-3UTR CCA 90 bp AAAATTCTCTTTGCTAACATTACCGGCGGTGACCAAACAATGTGTTTGGGCAGAACTGGTACTGGAATCTaGATCATCCGAAAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: KILFANITGGDQTMCLGRTGTGI*IIRKGC
Trigger: ACAGCCCTTTCGGATGATCCAGATTCCAGTACCAGT...TCTGCCCAAACACATTGTTTGGTCACCGCCGGTAATGTTAGCAAAGAGAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511258.5
CDS-3UTR CCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCATGTTTCCTAATGTACTaGTACTGGAATCTGGATCAT +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSCFLMY*YWNLDH
Trigger: ATGATCCAGATTCCAGTACCAGTACATTAGGAAACA...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTCACACTAGTCCTTTTTaGATTATCAGAGCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVHTSPF*IIRALS
Trigger: AGAAAGAGCTCTGATAATCCAAAAAGGACTAGTGTG...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACAGTGCAGTGGTGGTTCAAGAAGTTTTGCGAAGCAGGCGAGACCCTTGAAGATCACACTAGTCCTTTTTaGATTATCAGAGCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: TVQWWFKKFCEAGETLEDHTSPF*IIRALS
Trigger: AGAAAGAGCTCTGATAATCCAAAAAGGACTAGTGTG...ATCTTCAAGGGTCTCGCCTGCTTCGCAAAACTTCTTGAACCACCACTGCACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644863.1
CDS-3UTR CCA 90 bp TTTTGGATTATCAGAGCTCTTTCTGGCTCGAGATTTAGCGCAAGGCTTTTCCTTCACACCAGGCTTCGTTaGGGTTTATTCTTCTCTCGA +
Preference number: 4 (lower is better)
Translates to: FWIIRALSGSRFSARLFLHTRLR*GLFFSR
Trigger: TCGAGAGAAGAATAAACCCCAACGAAGCCTGGTGTG...AAGGAAAAGCCTTGCGCTAAATCTCGAGCCAGAAAGAGCTCTGATAATCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638627.2
CDS-3UTR CCA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGCTGAGCTGTGTTCTATaGGATCCAGGTCACTGCTTC +
Preference number: 4 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKLSCVL*DPGHCF
Trigger: GAAGCAGTGACCTGGATCCCATAGAACACAGCTCAG...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCATCTATCGAAAGCATCTaGAATTTCAAGGACACTGTT +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSSIESI*NFKDTV
Trigger: AACAGTGTCCTTGAAATTCCAGATGCTTTCGATAGA...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTGTACAACCCATTAAGTaGTCTGTATGTGAGTTACTA +
Preference number: 4 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGVQPIK*SVCELL
Trigger: TAGTAACTCACATACAGACCACTTAATGGGTTGTAC...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TCCCCCTTCTTGGGCATAAATCCAGGGTCTAAATCATTGGATTCAAGAAGTTTCCCTGTGGTGTCAAACTaGGAATTCCTGGCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: SPFLGINPGSKSLDSRSFPVVSN*EFLAPF
Trigger: AAAAGGAGCCAGGAATTCCCAGTTTGACACCACAGG...GAAACTTCTTGAATCCAATGATTTAGACCCTGGATTTATGCCCAAGAAGGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375350.3
CDS-3UTR CCA 90 bp TGTCCTGTGAGACATCTAGACTGCTGTCAAGTTGATTACCTACCAAAGCCTACTTGCAGAAACATTGGCTaGATTAGCAGCATGACAGGT +
Preference number: 4 (lower is better)
Translates to: CPVRHLDCCQVDYLPKPTCRNIG*ISSMTG
Trigger: ACCTGTCATGCTGCTAATCCAGCCAATGTTTCTGCA...AGTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCTAGATGTCTCACAGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTGCCCTCAATGGTCATCTTATCAATGTTaGAAGGAACAGCTCGAGGAT +
Preference number: 4 (lower is better)
Translates to: TDLKEHHFLPRVPRCPQWSSYQC*KEQLED
Trigger: ATCCTCGAGCTGTTCCTTCCAACATTGATAAGATGA...CCATTGAGGGCACCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CAGGAAATCGCCACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTCATCTTATCAATGTTaGAAGGAACAGCTCGAGGAT +
Preference number: 4 (lower is better)
Translates to: QEIATDLKEHHFLPRVPRSSYQC*KEQLED
Trigger: ATCCTCGAGCTGTTCCTTCCAACATTGATAAGATGA...CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAATGTTTATAAGGTGGTaGCTTCTTGTCATTCTTTCG +
Preference number: 4 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSMFIRW*LLVILS
Trigger: CGAAAGAATGACAAGAAGCCACCACCTTATAAACAT...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CACAGTGATTTAAGTCATCTCAAACTCAGTAACAGGGTAAAGCAGACATTTAAACGGCAGGACACACTGTaGGGTGGCACTCATAGAGCA +
Preference number: 4 (lower is better)
Translates to: HSDLSHLKLSNRVKQTFKRQDTL*GGTHRA
Trigger: TGCTCTATGAGTGCCACCCCACAGTGTGTCCTGCCG...TTTAAATGTCTGCTTTACCCTGTTACTGAGTTTGAGATGACTTAAATCACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CACAGTGATTTAAGTCATCTCAAACTCAGTAACAGGGTAAAGCAGACATTTAAAGTTTTCTCCAGTGACTaGGGCCTTGGGCTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: HSDLSHLKLSNRVKQTFKVFSSD*GLGLAA
Trigger: TGCTGCCAGCCCAAGGCCCCAGTCACTGGAGAAAAC...TTTAAATGTCTGCTTTACCCTGTTACTGAGTTTGAGATGACTTAAATCACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTTTAGCTACAAGGGTCTaGACCACAGCTGATAGTACT +
Preference number: 4 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPLATRV*TTADST
Trigger: AGTACTATCAGCTGTGGTCCAGACCCTTGTAGCTAA...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TGTCCTGTGAGACATCTAGACTGCTGTCAAGTTGATTACCTACCAAAGCCTACTCAACACAACCACTTCTaGTGCCACAAAGGACATTTC +
Preference number: 4 (lower is better)
Translates to: CPVRHLDCCQVDYLPKPTQHNHF*CHKGHF
Trigger: GAAATGTCCTTTGTGGCACCAGAAGTGGTTGTGTTG...AGTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCTAGATGTCTCACAGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AGATGTATTGGCTTTCTAGCTACCCATGGAGAATTTCAACTTTTGCCTTGTCCCATTAGAATTACAACCTaGGAGTCCGGCTCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: RCIGFLATHGEFQLLPCPIRITT*ESGSSE
Trigger: CTCACTGGAGCCGGACTCCCAGGTTGTAATTCTAAT...GGGACAAGGCAAAAGTTGAAATTCTCCATGGGTAGCTAGAAAGCCAATACATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CAGGAAATCGCCACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGGTGGCTCAGAAAAATTaGATTGACCATTACCGAAAG +
Preference number: 4 (lower is better)
Translates to: QEIATDLKEHHFLPRVPRVAQKN*IDHYRK
Trigger: CTTTCGGTAATGGTCAATCCAATTTTTCTGAGCCAC...CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439151.7
CDS-3UTR CCA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTTGTTACTTTTACCTaGAGTTCAGGGGAGTTATTA +
Preference number: 4 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWFVTFT*SSGELL
Trigger: TAATAACTCCCCTGAACTCCAGGTAAAAGTAACAAA...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000439151.7
3UTR CAA 72 bp AAGCAGTGGAGACAATTCACAACATCAACAACACGTTaGCCCCAGGAACTTCAAACAAACGTACAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: KQWRQFTTSTTR*PQELQTNVQCS
Trigger: ACTGCACTGTACGTTTGTTTGAAGTTCCTGGGGCAAACGTGTTGTTGATGTTGTGAATTGTCTCCACTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644863.1
CDS-3UTR TCA 90 bp CAGGAAATCGCCACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGAGAATCAAAAGCCAGTaGTTTCAAACAGCCATTAAG +
Preference number: 4 (lower is better)
Translates to: QEIATDLKEHHFLPRVPRRIKSQ*FQTAIK
Trigger: CTTAATGGCTGTTTGAAATCACTGGCTTTTGATTCT...CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTTGCTTGATGACAGGTTaGATTTTGGAGAGAGAGCAT +
Preference number: 4 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPCLMTG*ILEREH
Trigger: ATGCTCTCTCTCCAAAATTCAACCTGTCATCAAGCA...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGAAAGTGGCCCATTATCTaGAGGGGATCCTCTTTACTA +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRKWPII*RGSSLL
Trigger: TAGTAAAGAGGATCCCCTTCAGATAATGGGCCACTT...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CACAGTGATTTAAGTCATCTCAAACTCAGTAACAGGGTAAAGCAGACATTTAAATCCACCTGCTTGTTCTaGGCACTAGATCGACCTCGG +
Preference number: 4 (lower is better)
Translates to: HSDLSHLKLSNRVKQTFKSTCLF*ALDRPR
Trigger: CCGAGGTCGATCTAGTGCTCAGAACAAGCAGGTGGA...TTTAAATGTCTGCTTTACCCTGTTACTGAGTTTGAGATGACTTAAATCACTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CACAGTGATTTAAGTCATCTCAAACTCAGTAACAGGGTAAAGCAGACATTTAAAAAAGCCCCACAGCACTaGGCCTCACATAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: HSDLSHLKLSNRVKQTFKKAPQH*ASHNSS
Trigger: GCTGCTGTTATGTGAGGCTCAGTGCTGTGGGGCTTT...TTTAAATGTCTGCTTTACCCTGTTACTGAGTTTGAGATGACTTAAATCACTGTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGGCTGGATTAGCAGCATaGCAGGTTATACAGATGTGG +
Preference number: 4 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKAGLAA*QVIQMW
Trigger: CCACATCTGTATAACCTGTCATGCTGCTAATCCAGC...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGACTGAGTGTTGGGATATaGGGAAAGAATAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRLSVGI*GKNNSG
Trigger: CCCACTGTTATTCTTTCCTCATATCCCAACACTCAG...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CACAGTGATTTAAGTCATCTCAAACTCAGTAACAGGGTAAAGCAGACATTTAAAATTCCGAGGTCTCAGTaGAATGCAGGGATAGGCCCC +
Preference number: 4 (lower is better)
Translates to: HSDLSHLKLSNRVKQTFKIPRSQ*NAGIGP
Trigger: GGGGCCTATCCCTGCATTTCACTGAGACCTCGGAAT...TTTAAATGTCTGCTTTACCCTGTTACTGAGTTTGAGATGACTTAAATCACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AGATGTATTGGCTTTCTAGCTACCCATGGAGAATTTCAACTTTTGCCTTGTCCCGCGTCTCTTGAATTTTaGCCAGATGAGATCTCCAAC +
Preference number: 4 (lower is better)
Translates to: RCIGFLATHGEFQLLPCPASLEF*PDEISN
Trigger: GTTGGAGATCTCATCTGGGCAAAATTCAAGAGACGC...GGGACAAGGCAAAAGTTGAAATTCTCCATGGGTAGCTAGAAAGCCAATACATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp TTGAACCAGGAATACATTTTCGGTTCTTTGACCCCTTGGGAACATCATACTGTTTTCAAACATGACGATTaGTTTTCCAGCCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: LNQEYIFGSLTPWEHHTVFKHDD*FSSHPG
Trigger: GCCTGGGTGGCTGGAAAAGCAATCGTCATGTTTGAA...AACAGTATGATGTTCCCAAGGGGTCAAAGAACCGAAAATGTATTCCTGGTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR GCA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCTTTTCCTTCTCATCTaGAGAATGTTCAGAATCAAA +
Preference number: 4 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVLFLLI*RMFRIK
Trigger: TTTGATTCTGAACATTCTGCAGATGAGAAGGAAAAG...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp TGTCCTGTGAGACATCTAGACTGCTGTCAAGTTGATTACCTACCAAAGCCTACTCCCTGTGAGGCTATTTaGTATCCTGGAAAGTTCATT +
Preference number: 4 (lower is better)
Translates to: CPVRHLDCCQVDYLPKPTPCEAI*YPGKFI
Trigger: AATGAACTTTCCAGGATAGCAAATAGCCTCACAGGG...AGTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCTAGATGTCTCACAGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp TTGAGATCAAAGCACCCTCAGGCAAGCCCAATAAAGAGTCACCATTTGAAGTCTCCCTGTGAGGCTATTTaGTATCCTGGAAAGTTCATT +
Preference number: 4 (lower is better)
Translates to: LRSKHPQASPIKSHHLKSPCEAI*YPGKFI
Trigger: AATGAACTTTCCAGGATAGCAAATAGCCTCACAGGG...AGACTTCAAATGGTGACTCTTTATTGGGCTTGCCTGAGGGTGCTTTGATCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638627.2
CDS-3UTR GCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGACTTACCTTGTGCACCTaGTCCTGTACCTTCTTTTGT +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRLTLCT*SCTFFC
Trigger: ACAAAAGAAGGTACAGGAGCAGGTGCACAAGGTAAG...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CACAGTGATTTAAGTCATCTCAAACTCAGTAACAGGGTAAAGCAGACATTTAAAGTCATTGGCGTGGTATaGCACAGGACAGCGGACACA +
Preference number: 4 (lower is better)
Translates to: HSDLSHLKLSNRVKQTFKVIGVV*HRTADT
Trigger: TGTGTCCGCTGTCCTGTGGCATACCACGCCAATGAC...TTTAAATGTCTGCTTTACCCTGTTACTGAGTTTGAGATGACTTAAATCACTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGATTCCTCAAACCTTGCTaGAGCTTCCTGAAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRFLKPC*SFLKSF
Trigger: AAAGCTCTTCAGGAAGCTGCAGCAAGGTTTGAGGAA...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AGATGTATTGGCTTTCTAGCTACCCATGGAGAATTTCAACTTTTGCCTTGTCCCCAGATTGAGACAGTCTaGGTGGTAAACTTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: RCIGFLATHGEFQLLPCPQIETV*VVNFWA
Trigger: TGCCCAAAAGTTTACCACGCAGACTGTCTCAATCTG...GGGACAAGGCAAAAGTTGAAATTCTCCATGGGTAGCTAGAAAGCCAATACATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGAACCCAAATACCACCCTaGGTTAAGGACCAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRTQIPP*VKDQKF
Trigger: AAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGT...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp GATGAGATCTCCAACTTCATACTTCAGTGGCGTAGACTTTTTCTTAGGTTGACATGGTTCAAGAAGTTTTaGGAAGCAGGCGAGACCCTT +
Preference number: 4 (lower is better)
Translates to: DEISNFILQWRRLFLRLTWFKKF*EAGETL
Trigger: AAGGGTCTCGCCTGCTTCGCAAAACTTCTTGAACCA...TGTCAACCTAAGAAAAAGTCTACGCCACTGAAGTATGAAGTTGGAGATCTCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644863.1
CDS-3UTR CCA 90 bp ACCCCTTGGGAACATCATACTGTTCTGCAAGTCCAACACTGGCTTCCCATTTACTGTTTCCTAATGTACTaGTACTGGAATCTGGATCAT +
Preference number: 4 (lower is better)
Translates to: TPWEHHTVLQVQHWLPIYCFLMY*YWNLDH
Trigger: ATGATCCAGATTCCAGTACCAGTACATTAGGAAACA...GTAAATGGGAAGCCAGTGTTGGACTTGCAGAACAGTATGATGTTCCCAAGGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR CCA 90 bp ACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTGCCCTCAATGGAACTTCATACTTCAGTaGCGTAGACTTTTTCTTAGG +
Preference number: 4 (lower is better)
Translates to: TDLKEHHFLPRVPRCPQWNFILQ*RRLFLR
Trigger: CCTAAGAAAAAGTCTACGCCACTGAAGTATGAAGTT...CCATTGAGGGCACCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAACATGACGATTGCTTTTCCAGCCACCCAGGCTCTCTCAGAAGGATCTCCAAATCTATCGAAAGCATCTaGAATTTCAAGGACACTGTT +
Preference number: 4 (lower is better)
Translates to: KHDDCFSSHPGSLRRISKSIESI*NFKDTV
Trigger: AACAGTGTCCTTGAAATTCCAGATGCTTTCGATAGA...TTTGGAGATCCTTCTGAGAGAGCCTGGGTGGCTGGAAAAGCAATCGTCATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638627.2
CDS-3UTR CCA 90 bp AGATGTATTGGCTTTCTAGCTACCCATGGAGAATTTCAACTTTTGCCTTGTCCCCTCCTCATTTATAACTaGGGGTTCTGCCATAACTGG +
Preference number: 4 (lower is better)
Translates to: RCIGFLATHGEFQLLPCPLLIYN*GFCHNW
Trigger: CCAGTTATGGCAGAACCCCCAGTTATAAATGAGGAG...GGGACAAGGCAAAAGTTGAAATTCTCCATGGGTAGCTAGAAAGCCAATACATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTGCCCTCAATGGATCAAGAGTCACACTTaGAAGCTGATTCAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: TDLKEHHFLPRVPRCPQWIKSHT*KLIQFS
Trigger: AGAAAACTGAATCAGCTTCCAAGTGTGACTCTTGAT...CCATTGAGGGCACCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TCCCCCTTCTTGGGCATAAATCCAGGGTCTAAATCATTGGATTCAAGAAGTTTCCAAAAGCCACTTGCTTaGCTTCCTAAGGCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: SPFLGINPGSKSLDSRSFQKPLA*LPKAFL
Trigger: AAGAAACGCCTTAGGAAGCCAAGCAAGTGGCTTTTG...GAAACTTCTTGAATCCAATGATTTAGACCCTGGATTTATGCCCAAGAAGGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375350.3
CDS-3UTR CCA 90 bp CAGGAAATCGCCACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGATGTTTATAAGGTGGTaGCTTCTTGTCATTCTTTCG +
Preference number: 4 (lower is better)
Translates to: QEIATDLKEHHFLPRVPRMFIRW*LLVILS
Trigger: CGAAAGAATGACAAGAAGCCACCACCTTATAAACAT...CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CACAGTGATTTAAGTCATCTCAAACTCAGTAACAGGGTAAAGCAGACATTTAAATTGCAGGAGACGAGCTaGCCAGCATCCCCACAACTA +
Preference number: 4 (lower is better)
Translates to: HSDLSHLKLSNRVKQTFKLQETS*PASPQL
Trigger: TAGTTGTGGGGATGCTGGCCAGCTCGTCTCCTGCAA...TTTAAATGTCTGCTTTACCCTGTTACTGAGTTTGAGATGACTTAAATCACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGAGTTTATCTGACATTTTaGGTGCCTGAGCAGCCATTC +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRVYLTF*VPEQPF
Trigger: GAATGGCTGCTCAGGCACCCAAAATGTCAGATAAAC...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GCACATACCCAAATACCACCCTGCGTTAAGGACCAGAAGTTTTCTAAGATGAAATTCACGATGACCATGTaGAAAAGTTGGGGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: AHTQIPPCVKDQKFSKMKFTMTM*KSWGKE
Trigger: CTCTTTCCCCCAACTTTTCCACATGGTCATCGTGAA...TTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGAGCTATTAGACTGGGTTaGCTCCAGCAAGATAAGCAA +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRAIRLG*LQQDKQ
Trigger: TTGCTTATCTTGCTGGAGCCAACCCAGTCTAATAGC...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AGATGTATTGGCTTTCTAGCTACCCATGGAGAATTTCAACTTTTGCCTTGTCCCTACAGTACATGTTTATaGGGACTCCTAACACAGGGC +
Preference number: 4 (lower is better)
Translates to: RCIGFLATHGEFQLLPCPYSTCL*GLLTQG
Trigger: GCCCTGTGTTAGGAGTCCCCATAAACATGTACTGTA...GGGACAAGGCAAAAGTTGAAATTCTCCATGGGTAGCTAGAAAGCCAATACATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp TGTCCTGTGAGACATCTAGACTGCTGTCAAGTTGATTACCTACCAAAGCCTACTTCAGGAAATCGCCACTaGTTTGAAAGAACACCATTT +
Preference number: 4 (lower is better)
Translates to: CPVRHLDCCQVDYLPKPTSGNRH*FERTPF
Trigger: AAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTGA...AGTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCTAGATGTCTCACAGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTGCCATTCTGTTCTCATaGGGCAACATTAGAATTACA +
Preference number: 4 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPAILFS*GNIRIT
Trigger: TGTAATTCTAATGTTGCCTCATGAGAACAGAATGGC...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGGCAACTACCAAGCAGTaGCTTGGAATGTCTACACAT +
Preference number: 4 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKATTKQ*LGMSTH
Trigger: ATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGC...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CACAGTGATTTAAGTCATCTCAAACTCAGTAACAGGGTAAAGCAGACATTTAAAAGTTTCACTTACAGCTaGCAATCTATGGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: HSDLSHLKLSNRVKQTFKSFTYS*QSMGAG
Trigger: CCCCGCCCCCATAGATTGTCAGCTGTAAGTGAAACT...TTTAAATGTCTGCTTTACCCTGTTACTGAGTTTGAGATGACTTAAATCACTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp TTTTGGATTATCAGAGCTCTTTCTGGCTCGAGATTTAGCGCAAGGCTTTTCCTTAACATCATACTGTTCTaGAAGTCCAACACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: FWIIRALSGSRFSARLFLNIILF*KSNTGF
Trigger: GAAGCCAGTGTTGGACTTGCAGAACAGTATGATGTT...AAGGAAAAGCCTTGCGCTAAATCTCGAGCCAGAAAGAGCTCTGATAATCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR GCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGACCCTGTGAGGCTATTTaGTATCCTGGAAAGTTCATT +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRPCEAI*YPGKFI
Trigger: AATGAACTTTCCAGGATAGCAAATAGCCTCACAGGG...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp AGATGTATTGGCTTTCTAGCTACCCATGGAGAATTTCAACTTTTGCCTTGTCCCCAACCGACCTTTAGATaGAGAAACATTGGCTGGATT +
Preference number: 4 (lower is better)
Translates to: RCIGFLATHGEFQLLPCPQPTFR*RNIGWI
Trigger: AATCCAGCCAATGTTTCTGCATCTAAAGGTCGGTTG...GGGACAAGGCAAAAGTTGAAATTCTCCATGGGTAGCTAGAAAGCCAATACATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TCACTTTTGAACCACACACCAGGCTTCGTTGGGGTTTATTCTTCTCTCGAGAACAACTTCATACTTCAGTaGCGTAGACTTTTTCTTAGG +
Preference number: 4 (lower is better)
Translates to: SLLNHTPGFVGVYSSLENNFILQ*RRLFLR
Trigger: CCTAAGAAAAAGTCTACGCCACTGAAGTATGAAGTT...GTTCTCGAGAGAAGAATAAACCCCAACGAAGCCTGGTGTGTGGTTCAAAAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638627.2
CDS-3UTR CCA 90 bp CCTTGGGAACATCATACTGTTCTGCAAGTCCAACACTGGCTTCCCATTTACTCAAACTTCATACTTCAGTaGCGTAGACTTTTTCTTAGG +
Preference number: 4 (lower is better)
Translates to: PWEHHTVLQVQHWLPIYSNFILQ*RRLFLR
Trigger: CCTAAGAAAAAGTCTACGCCACTGAAGTATGAAGTT...TGAGTAAATGGGAAGCCAGTGTTGGACTTGCAGAACAGTATGATGTTCCCAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR CCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGAAAGCATCTCGCAATTTaGATGAAGGCTTTGATCGTC +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRKHLAI*MKALIV
Trigger: GACGATCAAAGCCTTCATCCAAATTGCGAGATGCTT...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AGATGTATTGGCTTTCTAGCTACCCATGGAGAATTTCAACTTTTGCCTTGTCCCAAGCATCTCGCAATTTaGATGAAGGCTTTGATCGTC +
Preference number: 4 (lower is better)
Translates to: RCIGFLATHGEFQLLPCPKHLAI*MKALIV
Trigger: GACGATCAAAGCCTTCATCCAAATTGCGAGATGCTT...GGGACAAGGCAAAAGTTGAAATTCTCCATGGGTAGCTAGAAAGCCAATACATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCCTTCTTGGGCATAAATCCAGGGTCTAAATCATTGGATTCAAGAAGTTTCTTACAAACTGGGAATTCCTaGCTCCTTTTCCATGTCACC +
Preference number: 4 (lower is better)
Translates to: PFLGINPGSKSLDSRSFLQTGNS*LLFHVT
Trigger: GGTGACATGGAAAAGGAGCCAGGAATTCCCAGTTTG...TAAGAAACTTCTTGAATCCAATGATTTAGACCCTGGATTTATGCCCAAGAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375350.3
CDS-3UTR CCA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGCAAAAGCCACTTGCTTaGCTTCCTAAGGCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKQKPLA*LPKAFL
Trigger: AAGAAACGCCTTAGGAAGCCAAGCAAGTGGCTTTTG...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TGTCCTGTGAGACATCTAGACTGCTGTCAAGTTGATTACCTACCAAAGCCTACTTCGTTTTCGCTTCCTTaGCTTGTCAAATATCTTGGT +
Preference number: 4 (lower is better)
Translates to: CPVRHLDCCQVDYLPKPTSFSLP*LVKYLG
Trigger: ACCAAGATATTTGACAAGCCAAGGAAGCGAAAACGA...AGTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCTAGATGTCTCACAGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGTTGGTTGGGGCCCACTaGATTTTCATACATGGTTCA +
Preference number: 4 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKLVGAH*IFIHGS
Trigger: TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAA...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TGTCCTGTGAGACATCTAGACTGCTGTCAAGTTGATTACCTACCAAAGCCTACTGAAATAGGGATGGGGTaGATTCATGTACAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: CPVRHLDCCQVDYLPKPTEIGMG*IHVQRE
Trigger: TTCTCTTTGTACATGAATCCACCCCATCCCTATTTC...AGTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCTAGATGTCTCACAGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTATTGAATTCCATACTTaGCTCCAGAGTGGACTTTTT +
Preference number: 4 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPIEFHT*LQSGLF
Trigger: AAAAAGTCCACTCTGGAGTCAAGTATGGAATTCAAT...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp TGTCCTGTGAGACATCTAGACTGCTGTCAAGTTGATTACCTACCAAAGCCTACTATTGAATTCCATACTTaGCTCCAGAGTGGACTTTTT +
Preference number: 4 (lower is better)
Translates to: CPVRHLDCCQVDYLPKPTIEFHT*LQSGLF
Trigger: AAAAAGTCCACTCTGGAGTCAAGTATGGAATTCAAT...AGTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCTAGATGTCTCACAGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGAAATACAGAATCCTATTaGGAGCGTGAAAGCCATAAC +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRNTESY*ERESHN
Trigger: GTTATGGCTTTCACGCTCTCAATAGGATTCTGTATT...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGGCAGATACCTTTTTCTaGTCACAACTACAGATGACT +
Preference number: 4 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVADTFF*SQLQMT
Trigger: AGTCATCTGTAGTTGTGATCAGAAAAAGGTATCTGC...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ACATCATACTGTTCTGCAAGTCCAACACTGGCTTCCCATTTACTCAAAATTTTCGCGTCTCTTGAATTTTaGCCAGATGAGATCTCCAAC +
Preference number: 4 (lower is better)
Translates to: TSYCSASPTLASHLLKIFASLEF*PDEISN
Trigger: GTTGGAGATCTCATCTGGGCAAAATTCAAGAGACGC...GAAAATTTTGAGTAAATGGGAAGCCAGTGTTGGACTTGCAGAACAGTATGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR GCA 90 bp GATGAGATCTCCAACTTCATACTTCAGTGGCGTAGACTTTTTCTTAGGTTGACAAGTTCATTAGAGGCCTaGGTATCAGATATATCCCCA +
Preference number: 4 (lower is better)
Translates to: DEISNFILQWRRLFLRLTSSLEA*VSDISP
Trigger: TGGGGATATATCTGATACGCAGGCCTCTAATGAACT...TGTCAACCTAAGAAAAAGTCTACGCCACTGAAGTATGAAGTTGGAGATCTCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR GCA 90 bp AACTTGATTGAACCAGGAATACATTTTCGGTTCTTTGACCCCTTGGGAACATCACTTTTCCTCATCACCTaGTCCAATATAGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: NLIEPGIHFRFFDPLGTSLFLIT*SNIAEL
Trigger: AAGCTCTGCTATATTGGAGCAGGTGATGAGGAAAAG...TGATGTTCCCAAGGGGTCAAAGAACCGAAAATGTATTCCTGGTTCAATCAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638627.2
CDS-3UTR GCA 90 bp AGATGTATTGGCTTTCTAGCTACCCATGGAGAATTTCAACTTTTGCCTTGTCCCGGAACTTGGGCTGTTTaGTTTTCGAATGTAATAGAG +
Preference number: 4 (lower is better)
Translates to: RCIGFLATHGEFQLLPCPGTWAV*FSNVIE
Trigger: CTCTATTACATTCGAAAAGCAAACAGCCCAAGTTCC...GGGACAAGGCAAAAGTTGAAATTCTCCATGGGTAGCTAGAAAGCCAATACATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CACAGTGATTTAAGTCATCTCAAACTCAGTAACAGGGTAAAGCAGACATTTAAAATCTTGGCTGCAGCATaGCTCTGTCGTTTTCGCTTC +
Preference number: 4 (lower is better)
Translates to: HSDLSHLKLSNRVKQTFKILAAA*LCRFRF
Trigger: GAAGCGAAAACGACAGAGGCATGCTGCAGCCAAGAT...TTTAAATGTCTGCTTTACCCTGTTACTGAGTTTGAGATGACTTAAATCACTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGAACATCTTCCCCACTCTaGTTACATACAAAACAGGTA +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRTSSPL*LHTKQV
Trigger: TACCTGTTTTGTATGTAAGCAGAGTGGGGAAGATGT...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGACATCTTCCCCACTCTaGTTACATACAAAACAGGTA +
Preference number: 4 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVTSSPL*LHTKQV
Trigger: TACCTGTTTTGTATGTAAGCAGAGTGGGGAAGATGT...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGTGTAGTGTGGCTTTTTaGCTGCTTTACAGTCATTGC +
Preference number: 4 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKCSVAF*LLYSHC
Trigger: GCAATGACTGTAAAGCAGGCAAAAAGCCACACTACA...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CACAGTGATTTAAGTCATCTCAAACTCAGTAACAGGGTAAAGCAGACATTTAAAGAGGTCTCAGTGAAATaGAGGGATAGGCCCCTAAAC +
Preference number: 4 (lower is better)
Translates to: HSDLSHLKLSNRVKQTFKEVSVK*RDRPLN
Trigger: GTTTAGGGGCCTATCCCTGCATTTCACTGAGACCTC...TTTAAATGTCTGCTTTACCCTGTTACTGAGTTTGAGATGACTTAAATCACTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGAGTGAGACATCTAGACTaGTGTCAAGTTGATTACCTA +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRVRHLD*CQVDYL
Trigger: TAGGTAATCAACTTGACAGCAGTCTAGATGTCTCAC...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGAGTCTACACATGGAACTaGTCAAATGAAACTCAGCAA +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRVYTWN*SNETQQ
Trigger: TTGCTGAGTTTCATTTGAGCAGTTCCATGTGTAGAC...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGACTAATGTACTGGTACTaGAATCTGGATCATCCGAAA +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRLMYWY*NLDHPK
Trigger: TTTCGGATGATCCAGATTCCAGTACCAGTACATTAG...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347982.8
ENST00000354179.8
CDS-3UTR CCA 90 bp AAAATTCTCTTTGCTAACATTACCGGCGGTGACCAAACAATGTGTTTGGGCAGACTAATGTACTGGTACTaGAATCTGGATCATCCGAAA +
Preference number: 4 (lower is better)
Translates to: KILFANITGGDQTMCLGRLMYWY*NLDHPK
Trigger: TTTCGGATGATCCAGATTCCAGTACCAGTACATTAG...TCTGCCCAAACACATTGTTTGGTCACCGCCGGTAATGTTAGCAAAGAGAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511258.5
CDS-3UTR CCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGATTAACGAGTTCTCACTaGATATGCTTGATGACAGGT +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRLTSSH*ICLMTG
Trigger: ACCTGTCATCAAGCATATCCAGTGAGAACTCGTTAA...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGAATCTCCCTGTAGTGTaGCTTTTTGCCTGCTTTACA +
Preference number: 4 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKNLPVV*LFACFT
Trigger: TGTAAAGCAGGCAAAAAGCCACACTACAGGGAGATT...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GCACATACCCAAATACCACCCTGCGTTAAGGACCAGAAGTTTTCTAAGATGAAATTGACTTTTCTTCCGTaGCAATGGGTTGATTCTTTG +
Preference number: 4 (lower is better)
Translates to: AHTQIPPCVKDQKFSKMKLTFLP*QWVDSL
Trigger: CAAAGAATCAACCCATTGCCACGGAAGAAAAGTCAA...TTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GCACATACCCAAATACCACCCTGCGTTAAGGACCAGAAGTTTTCTAAGATGAAACTTTCTAGCTACCCATaGAGAATTTCAACTTTTGCC +
Preference number: 4 (lower is better)
Translates to: AHTQIPPCVKDQKFSKMKLSSYP*RISTFA
Trigger: GGCAAAAGTTGAAATTCTCCATGGGTAGCTAGAAAG...TTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGTACCAAGCAGTGACTTaGAATGTCTACACATGGAAC +
Preference number: 4 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKYQAVT*NVYTWN
Trigger: GTTCCATGTGTAGACATTCCAAGTCACTGCTTGGTA...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTTGGAATGTAACAAGATaGAGAATCTTGTCCATAAGC +
Preference number: 4 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPWNVTR*RILSIS
Trigger: GCTTATGGACAAGATTCTCCATCTTGTTACATTCCA...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439151.7
CDS-3UTR CCA 90 bp AAACAGCCATTAAGCAACAGGTCATGTTCTGACTCAGGATCATTTGTGCAGTCTTGGGTCATAAAGCAGTaGAGACAATTCACAACATCA +
Preference number: 4 (lower is better)
Translates to: KQPLSNRSCSDSGSFVQSWVIKQ*RQFTTS
Trigger: TGATGTTGTGAATTGTCTCCACTGCTTTATGACCCA...AGACTGCACAAATGATCCTGAGTCAGAACATGACCTGTTGCTTAATGGCTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644863.1
CDS-3UTR TCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGACTTGATTTACACCATTaGGTTCATCATTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRLDLHH*VHHSHC
Trigger: ACAGTGAGAATGATGAACTCAATGGTGTAAATCAAG...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGACTTCTTGAATTTCTTTaGCTTTTCTTCCGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRLLEFL*LFFRGN
Trigger: ATTGCCACGGAAGAAAAGTCAAAGAAATTCAAGAAG...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGTTCATAATCTTTTTCTaGCTTAGCAGGGCTAGATGT +
Preference number: 4 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVFIIFF*LSRARC
Trigger: ACATCTAGCCCTGCTAAGTCAGAAAAAGATTATGAA...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CACAGTGATTTAAGTCATCTCAAACTCAGTAACAGGGTAAAGCAGACATTTAAATCCACGAAACTTTGCTaGACTTCCAGGACCTTACAC +
Preference number: 4 (lower is better)
Translates to: HSDLSHLKLSNRVKQTFKSTKLC*TSRTLH
Trigger: GTGTAAGGTCCTGGAAGTTCAGCAAAGTTTCGTGGA...TTTAAATGTCTGCTTTACCCTGTTACTGAGTTTGAGATGACTTAAATCACTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGCCCAACCCTGGAAGTTaGAAACATAGAACCATTTAT +
Preference number: 4 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKPNPGS*KHRTIY
Trigger: ATAAATGGTTCTATGTTTTCAACTTCCAGGGTTGGG...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp AAAATTCTCTTTGCTAACATTACCGGCGGTGACCAAACAATGTGTTTGGGCAGAACACACTTCAAAATCTaGAACTACTGTAGTTCTAGC +
Preference number: 4 (lower is better)
Translates to: KILFANITGGDQTMCLGRTHFKI*NYCSSS
Trigger: GCTAGAACTACAGTAGTTTCAGATTTTGAAGTGTGT...TCTGCCCAAACACATTGTTTGGTCACCGCCGGTAATGTTAGCAAAGAGAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511258.5
CDS-3UTR GCA 90 bp AATTGTATGTGGCCCTTTTTCACACTAGTCCTTTTTGGATTATCAGAGCTCTTTGCGTCTCTTGAATTTTaGCCAGATGAGATCTCCAAC +
Preference number: 4 (lower is better)
Translates to: NCMWPFFTLVLFGLSELFASLEF*PDEISN
Trigger: GTTGGAGATCTCATCTGGGCAAAATTCAAGAGACGC...AAAGAGCTCTGATAATCCAAAAAGGACTAGTGTGAAAAAGGGCCACATACAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR GCA 90 bp CTTTTTGGATTATCAGAGCTCTTTCTGGCTCGAGATTTAGCGCAAGGCTTTTCCCTTTTCCTTCTCATCTaGAGAATGTTCAGAATCAAA +
Preference number: 4 (lower is better)
Translates to: LFGLSELFLARDLAQGFSLFLLI*RMFRIK
Trigger: TTTGATTCTGAACATTCTGCAGATGAGAAGGAAAAG...GGAAAAGCCTTGCGCTAAATCTCGAGCCAGAAAGAGCTCTGATAATCCAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR GCA 90 bp GTCCTTTTTGGATTATCAGAGCTCTTTCTGGCTCGAGATTTAGCGCAAGGCTTTCTTTTCCTTCTCATCTaGAGAATGTTCAGAATCAAA +
Preference number: 4 (lower is better)
Translates to: VLFGLSELFLARDLAQGFLFLLI*RMFRIK
Trigger: TTTGATTCTGAACATTCTGCAGATGAGAAGGAAAAG...AAAGCCTTGCGCTAAATCTCGAGCCAGAAAGAGCTCTGATAATCCAAAAAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR GCA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGACCTTGCTATCGAAATaGACATCAGAAAAATGGTCA +
Preference number: 4 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVTLLSK*TSEKWS
Trigger: TGACCATTTTTCTGATGTGCATTTCGATAGCAAGGT...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGAACCTTGCTATCGAAATaGACATCAGAAAAATGGTCA +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRTLLSK*TSEKWS
Trigger: TGACCATTTTTCTGATGTGCATTTCGATAGCAAGGT...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp CCCTTCTTGGGCATAAATCCAGGGTCTAAATCATTGGATTCAAGAAGTTTCTTATTCATAATTTCCTTGTaGACCTGCTCCTGTACCTTC +
Preference number: 4 (lower is better)
Translates to: PFLGINPGSKSLDSRSFLFIISL*TCSCTF
Trigger: GAAGGTACAGGAGCAGGTGCACAAGGAAATTATGAA...TAAGAAACTTCTTGAATCCAATGATTTAGACCCTGGATTTATGCCCAAGAAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375350.3
CDS-3UTR CCA 90 bp AAAATTCTCTTTGCTAACATTACCGGCGGTGACCAAACAATGTGTTTGGGCAGATGTTTCCTAATGTACTaGTACTGGAATCTGGATCAT +
Preference number: 4 (lower is better)
Translates to: KILFANITGGDQTMCLGRCFLMY*YWNLDH
Trigger: ATGATCCAGATTCCAGTACCAGTACATTAGGAAACA...TCTGCCCAAACACATTGTTTGGTCACCGCCGGTAATGTTAGCAAAGAGAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511258.5
CDS-3UTR CCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGAAACTTCATACTTCAGTaGCGTAGACTTTTTCTTAGG +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRNFILQ*RRLFLR
Trigger: CCTAAGAAAAAGTCTACGCCACTGAAGTATGAAGTT...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGACACACTAGTCCTTTTTaGATTATCAGAGCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRHTSPF*IIRALS
Trigger: AGAAAGAGCTCTGATAATCCAAAAAGGACTAGTGTG...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AGATGTATTGGCTTTCTAGCTACCCATGGAGAATTTCAACTTTTGCCTTGTCCCCACACTAGTCCTTTTTaGATTATCAGAGCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: RCIGFLATHGEFQLLPCPHTSPF*IIRALS
Trigger: AGAAAGAGCTCTGATAATCCAAAAAGGACTAGTGTG...GGGACAAGGCAAAAGTTGAAATTCTCCATGGGTAGCTAGAAAGCCAATACATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp AAGCACCCTCAGGCAAGCCCAATAAAGAGTCACCATTTGAAGTCTCAAATTCTTCACACTAGTCCTTTTTaGATTATCAGAGCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: KHPQASPIKSHHLKSQILHTSPF*IIRALS
Trigger: AGAAAGAGCTCTGATAATCCAAAAAGGACTAGTGTG...AAGAATTTGAGACTTCAAATGGTGACTCTTTATTGGGCTTGCCTGAGGGTGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638627.2
CDS-3UTR CCA 90 bp ACTGTTCTGCAAGTCCAACACTGGCTTCCCATTTACTCAAAATTTTCTGAGGAAGCTTCAAATTGTATGTaGCCCTTTTTCACACTAGTC +
Preference number: 4 (lower is better)
Translates to: TVLQVQHWLPIYSKFSEEASNCM*PFFTLV
Trigger: GACTAGTGTGAAAAAGGGCCACATACAATTTGAAGC...TTCCTCAGAAAATTTTGAGTAAATGGGAAGCCAGTGTTGGACTTGCAGAACAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR CCA 90 bp ATTGAACCAGGAATACATTTTCGGTTCTTTGACCCCTTGGGAACATCATACTGTGCTTCAAATTGTATGTaGCCCTTTTTCACACTAGTC +
Preference number: 4 (lower is better)
Translates to: IEPGIHFRFFDPLGTSYCASNCM*PFFTLV
Trigger: GACTAGTGTGAAAAAGGGCCACATACAATTTGAAGC...ACAGTATGATGTTCCCAAGGGGTCAAAGAACCGAAAATGTATTCCTGGTTCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR CCA 90 bp AGATGTATTGGCTTTCTAGCTACCCATGGAGAATTTCAACTTTTGCCTTGTCCCGATAAATTTTCCTCTTaGCATCTCAGTCAATCCAAG +
Preference number: 4 (lower is better)
Translates to: RCIGFLATHGEFQLLPCPDKFSS*HLSQSK
Trigger: CTTGGATTGACTGAGATGCCAAGAGGAAAATTTATC...GGGACAAGGCAAAAGTTGAAATTCTCCATGGGTAGCTAGAAAGCCAATACATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGATGTCTTAGCTCTTTTTaGGCCTTTAATTCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRCLSSF*AFNSSN
Trigger: GTTTGAGGAATTAAAGGCCCAAAAAGAGCTAAGACA...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGAGAAAATTTCAACCTCTaGATATTGGCGCTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRENFNL*ILALGK
Trigger: TTTTCCAAGCGCCAATATCCAGAGGTTGAAATTTTC...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GCACATACCCAAATACCACCCTGCGTTAAGGACCAGAAGTTTTCTAAGATGAAATCAATGCTAAAGATTTaGTTCAGAAGAGGGTCAACA +
Preference number: 4 (lower is better)
Translates to: AHTQIPPCVKDQKFSKMKSMLKI*FRRGST
Trigger: TGTTGACCCTCTTCTGAACCAAATCTTTAGCATTGA...TTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGTGGAATGTCTACACATaGAACTGCTCAAATGAAACT +
Preference number: 4 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVWNVYT*NCSNET
Trigger: AGTTTCATTTGAGCAGTTCCATGTGTAGACATTCCA...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTCTTCTTCCGAGGTTGTaGATTTCTAGTTTAATTCTT +
Preference number: 4 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPLLPRL*ISSLIL
Trigger: AAGAATTAAACTAGAAATCCACAACCTCGGAAGAAG...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CAA 72 bp AACTTCATACTTCAGTGGCGTAGACTTTTTCTTAGGTaGACATCAGGTTCAAAATGGGTCATAAAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: NFILQWRRLFLR*TSGSKWVIKQW
Trigger: CCACTGCTTTATGACCCATTTTGAACCTGATGTCAACCTAAGAAAAAGTCTACGCCACTGAAGTATGAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644863.1
CDS-3UTR TCA 90 bp CAGTCTTCAAATGGCATATCTTCTTCACTGTCCAACTTGATTGAACCAGGAATACTTCACTGTCCAACTTaGTTGAACCAGGAATACATT +
Preference number: 4 (lower is better)
Translates to: QSSNGISSSLSNLIEPGILHCPT*LNQEYI
Trigger: AATGTATTCCTGGTTCAATCAAGTTGGACAGTGAAG...TATTCCTGGTTCAATCAAGTTGGACAGTGAAGAAGATATGCCATTTGAAGACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR TCA 90 bp GGTCATGTTCTGACTCAGGATCATTTGTGCAGTCTTCAAATGGCATATCTTCTTAGAATCAAAAGCCAGTaGTTTCAAACAGCCATTAAG +
Preference number: 4 (lower is better)
Translates to: GHVLTQDHLCSLQMAYLLRIKSQ*FQTAIK
Trigger: CTTAATGGCTGTTTGAAATCACTGGCTTTTGATTCT...AAGAAGATATGCCATTTGAAGACTGCACAAATGATCCTGAGTCAGAACATGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR TCA 90 bp CACAGTGATTTAAGTCATCTCAAACTCAGTAACAGGGTAAAGCAGACATTTAAAAAGTGGCCCATTATCTaGAGGGGATCCTCTTTACTA +
Preference number: 4 (lower is better)
Translates to: HSDLSHLKLSNRVKQTFKKWPII*RGSSLL
Trigger: TAGTAAAGAGGATCCCCTTCAGATAATGGGCCACTT...TTTAAATGTCTGCTTTACCCTGTTACTGAGTTTGAGATGACTTAAATCACTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CACAGTGATTTAAGTCATCTCAAACTCAGTAACAGGGTAAAGCAGACATTTAAAAGACTGCTGTCAAGTTaGTTACCTACCAAAGCCTAC +
Preference number: 4 (lower is better)
Translates to: HSDLSHLKLSNRVKQTFKRLLSS*LPTKAY
Trigger: GTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCT...TTTAAATGTCTGCTTTACCCTGTTACTGAGTTTGAGATGACTTAAATCACTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR GCA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGACTTTTCCTTCTCATCTaGAGAATGTTCAGAATCAAA +
Preference number: 4 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRLFLLI*RMFRIK
Trigger: TTTGATTCTGAACATTCTGCAGATGAGAAGGAAAAG...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp GTTGACATCAGGTTCAAAATGGGTCATAAAGCAGTGGAGACAATTCACAACATCTGTTTCCTAATGTACTaGTACTGGAATCTGGATCAT +
Preference number: 4 (lower is better)
Translates to: VDIRFKMGHKAVETIHNICFLMY*YWNLDH
Trigger: ATGATCCAGATTCCAGTACCAGTACATTAGGAAACA...GATGTTGTGAATTGTCTCCACTGCTTTATGACCCATTTTGAACCTGATGTCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644863.1
CDS-3UTR CCA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGATGTTTATAAGGTGGTaGCTTCTTGTCATTCTTTCG +
Preference number: 4 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKMFIRW*LLVILS
Trigger: CGAAAGAATGACAAGAAGCCACCACCTTATAAACAT...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGTGGAATGTCTACACATaGAACTGCTCAAATGAAACT +
Preference number: 4 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKWNVYT*NCSNET
Trigger: AGTTTCATTTGAGCAGTTCCATGTGTAGACATTCCA...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CAA 72 bp AAAAATGAGGATGTTTCTGTATCAATGACAGCTATTTaGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGC +
Preference number: 4 (lower is better)
Translates to: KNEDVSVSMTAI*LLDWVGSSKIS
Trigger: GCTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACAGAAACATCCTCATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CAA 72 bp ACAGCGCATGTTAAACTCGAAACACTTCTTCCGAGGTaGTGGATTTCTAGTTTAATTCTTTCCACTTCCTTA +
Preference number: 4 (lower is better)
Translates to: TAHVKLETLLPR*WISSLILSTSL
Trigger: TAAGGAAGTGGAAAGAATTAAACTAGAAATCCACAACCTCGGAAGAAGTGTTTCGAGTTTAACATGCGCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
3UTR CAA 72 bp CAGTCTTCAAATGGCATATCTTCTTCACTGTCCAACTaGATTGAACCAGGAATACATTTTCGGTTCTTTGAC +
Preference number: 4 (lower is better)
Translates to: QSSNGISSSLSN*IEPGIHFRFFD
Trigger: GTCAAAGAACCGAAAATGTATTCCTGGTTCAATCAAGTTGGACAGTGAAGAAGATATGCCATTTGAAGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR TCA 90 bp AATTGTATGTGGCCCTTTTTCACACTAGTCCTTTTTGGATTATCAGAGCTCTTTACTGTCCAACTTGATTaGACCAGGAATACATTTTCG +
Preference number: 4 (lower is better)
Translates to: NCMWPFFTLVLFGLSELFTVQLD*TRNTFS
Trigger: CGAAAATGTATTCCTGGTTCAATCAAGTTGGACAGT...AAAGAGCTCTGATAATCCAAAAAGGACTAGTGTGAAAAAGGGCCACATACAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR TCA 90 bp AATTGTATGTGGCCCTTTTTCACACTAGTCCTTTTTGGATTATCAGAGCTCTTTGACTTTTTCTTAGGTTaGCATCAGGTTCAAAATGGG +
Preference number: 4 (lower is better)
Translates to: NCMWPFFTLVLFGLSELFDFFLG*HQVQNG
Trigger: CCCATTTTGAACCTGATGTCAACCTAAGAAAAAGTC...AAAGAGCTCTGATAATCCAAAAAGGACTAGTGTGAAAAAGGGCCACATACAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000644863.1
CDS-3UTR CCA 90 bp CACAGTGATTTAAGTCATCTCAAACTCAGTAACAGGGTAAAGCAGACATTTAAAAATCTCCCTGTAGTGTaGCTTTTTGCCTGCTTTACA +
Preference number: 4 (lower is better)
Translates to: HSDLSHLKLSNRVKQTFKNLPVV*LFACFT
Trigger: TGTAAAGCAGGCAAAAAGCCACACTACAGGGAGATT...TTTAAATGTCTGCTTTACCCTGTTACTGAGTTTGAGATGACTTAAATCACTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CCA 90 bp CACAGTGATTTAAGTCATCTCAAACTCAGTAACAGGGTAAAGCAGACATTTAAATCGTTTTCGCTTCCTTaGCTTGTCAAATATCTTGGT +
Preference number: 4 (lower is better)
Translates to: HSDLSHLKLSNRVKQTFKSFSLP*LVKYLG
Trigger: ACCAAGATATTTGACAAGCCAAGGAAGCGAAAACGA...TTTAAATGTCTGCTTTACCCTGTTACTGAGTTTGAGATGACTTAAATCACTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR TCA 90 bp CACAGTGATTTAAGTCATCTCAAACTCAGTAACAGGGTAAAGCAGACATTTAAATTCATAATCTTTTTCTaGCTTAGCAGGGCTAGATGT +
Preference number: 4 (lower is better)
Translates to: HSDLSHLKLSNRVKQTFKFIIFF*LSRARC
Trigger: ACATCTAGCCCTGCTAAGTCAGAAAAAGATTATGAA...TTTAAATGTCTGCTTTACCCTGTTACTGAGTTTGAGATGACTTAAATCACTGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS GCA 90 bp GCGGCAAGTGCAGGTAGTTGCTGGCCTCCGACCATCTGCTTCGCCTaGTTCACCAGGCCCGGGGATTGGCTAAGAGGCCCTGGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: AASAGSCWPPTICFA*FTRPGDWLRGPGVC
Trigger: GCAGACCCCAGGGCCTCTTAGCCAATCCCCGGGCCTGGTGAAGCAGGCGAAGCAGATGGTCGGAGGCCAGCAACTACCTGCACTTGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS GCA 90 bp CCACTCTTGGCGGCAAGTGCAGGTAGTTGCTGGCCTCCGACCATCTaGTTCGCCTGCTTCACCAGGCCCGGGGATTGGCTAAGAGGCCCT +
Preference number: 5 (lower is better)
Translates to: PLLAASAGSCWPPTI*FACFTRPGDWLRGP
Trigger: AGGGCCTCTTAGCCAATCCCCGGGCCTGGTGAAGCAGGCGAAGCAGATGGTCGGAGGCCAGCAACTACCTGCACTTGCCGCCAAGAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 90 bp GGTGAGGAGCTTGGGCTGGTCACTGGAGAGGGTTTGTCGCTTAGCTaGGGTCTTGGTCCTGCCACTGCTGGTGGCCTGTCCAGTGGCCTC +
Preference number: 5 (lower is better)
Translates to: GEELGLVTGEGLSLS*GLGPATAGGLSSGL
Trigger: GAGGCCACTGGACAGGCCACCAGCAGTGGCAGGACCAAGACCCCAGCTAAGCGACAAACCCTCTCCAGTGACCAGCCCAAGCTCCTCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 90 bp TCCCAGCAGACCAGCAAGACTGTGCCAGTGTCTGTCCAGCCACTATaGGCCAGAGCCCTGCCCGTGATGAGGCTTTTCCCAGGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: SQQTSKTVPVSVQPL*ARALPVMRLFPGPR
Trigger: CCTGGGCCCTGGGAAAAGCCTCATCACGGGCAGGGCTCTGGCCCATAGTGGCTGGACAGACACTGGCACAGTCTTGCTGGTCTGCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTACACCAGGCCCGGGGATaGGCTAAGAGGCCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLHQARG*AKRPWG
Trigger: ACCCCAGGGCCTCTTAGCCAATCCCCGGGCCTGGTG...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTACTCGATGAGACCGCCTaGCTCTGGCCTGCCCCAACC +
Preference number: 5 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLLDETA*LWPAPT
Trigger: GGTTGGGGCAGGCCAGAGCAAGGCGGTCTCATCGAG...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS TCA 90 bp GCCTTGGGTCAGCCGTCCCCAGAGGTCTTTCCAGTGGTTGGGACCTaGCTGAGGGTGAGGAGCTTGGGCTGGTCACTGGAGAGGGTTTGT +
Preference number: 5 (lower is better)
Translates to: ALGQPSPEVFPVVGT*LRVRSLGWSLERVC
Trigger: ACAAACCCTCTCCAGTGACCAGCCCAAGCTCCTCACCCTCAGTCAGGTCCCAACCACTGGAAAGACCTCTGGGGACGGCTGACCCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS GCA 90 bp TGGGTGCCTGAGCAGCCATTCCTGTTGATTGCTCTGCCAGGTGAGTaGTTGGCCCTGGAGGCAGCGGTACTGGGGGAGGCACATACTCAC +
Preference number: 5 (lower is better)
Translates to: WVPEQPFLLIALPGE*LALEAAVLGEAHTH
Trigger: GTGAGTATGTGCCTCCCCCAGTACCGCTGCCTCCAGGGCCAAGCACTCACCTGGCAGAGCAATCAACAGGAATGGCTGCTCAGGCACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS GCA 90 bp AGAGACCTAAAAGATTGCCCACTCTTGGCGGCAAGTGCAGGTAGTTaGTGGCCTCCGACCATCTGCTTCGCCTGCTTCACCAGGCCCGGG +
Preference number: 5 (lower is better)
Translates to: RDLKDCPLLAASAGS*WPPTICFACFTRPG
Trigger: CCCGGGCCTGGTGAAGCAGGCGAAGCAGATGGTCGGAGGCCAGCAACTACCTGCACTTGCCGCCAAGAGTGGGCAATCTTTTAGGTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 90 bp TTATCCAGCCTTGGGTCAGCCGTCCCCAGAGGTCTTTCCAGTGGTTaGGACCTGACTGAGGGTGAGGAGCTTGGGCTGGTCACTGGAGAG +
Preference number: 5 (lower is better)
Translates to: LSSLGSAVPRGLSSG*DLTEGEELGLVTGE
Trigger: CTCTCCAGTGACCAGCCCAAGCTCCTCACCCTCAGTCAGGTCCCAACCACTGGAAAGACCTCTGGGGACGGCTGACCCAAGGCTGGATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 90 bp GACCTAAAAGATTGCCCACTCTTGGCGGCAAGTGCAGGTAGTTGCTaGCCTCCGACCATCTGCTTCGCCTGCTTCACCAGGCCCGGGGAT +
Preference number: 5 (lower is better)
Translates to: DLKDCPLLAASAGSC*PPTICFACFTRPGD
Trigger: ATCCCCGGGCCTGGTGAAGCAGGCGAAGCAGATGGTCGGAGGCCAGCAACTACCTGCACTTGCCGCCAAGAGTGGGCAATCTTTTAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGCTGAGGGTGAGGAGCTaGGGCTGGTCACTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWLRVRS*GWSLER
Trigger: CCTCTCCAGTGACCAGCCCAAGCTCCTCACCCTCAG...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCCTGAGGGTGAGGAGCTaGGGCTGGTCACTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLLRVRS*GWSLER
Trigger: CCTCTCCAGTGACCAGCCCAAGCTCCTCACCCTCAG...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCTGGTCAAAGGTTCCTGAAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTCAGTCTCCTTGGGGCTaGTGGCCGTCCTGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: PGQRFLKALESRLTGMRPQSPWG*WPSCEA
Trigger: TGCCTCACAGGACGGCCACAAGCCCCAAGGAGACTG...AGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTTCAGGAACCTTTGACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTCCAGGTTCCAGAGGATaGGGCCCACAGGGGTCATGC +
Preference number: 5 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFPGSRG*GPQGSC
Trigger: GCATGACCCCTGTGGGCCCAATCCTCTGGAACCTGG...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGCACCAGGCCCGGGGATaGGCTAAGAGGCCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGHQARG*AKRPWG
Trigger: ACCCCAGGGCCTCTTAGCCAATCCCCGGGCCTGGTG...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 90 bp CAGGCATCCCGGGATCGTGTTCTACACCTTCCTCAACAGTCTCCTTaGGGCTTGTGGCCGTCCTGTGAGGCATTAGTTCTCCCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: QASRDRVLHLPQQSP*GLWPSCEALVLPLS
Trigger: GCTCAGAGGGAGAACTAATGCCTCACAGGACGGCCACAAGCCCCAAGGAGACTGTTGAGGAAGGTGTAGAACACGATCCCGGGATGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGCAGCGGGAACTTACCTaGTGCACCTGCTCCTGTACC +
Preference number: 5 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWQRELT*CTCSCT
Trigger: GGTACAGGAGCAGGTGCACAAGGTAAGTTCCCGCTG...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTAGCGACAGCATCTGGTaGGTGTCAGCAGGAGGTTTA +
Preference number: 5 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQASDSIW*VSAGGL
Trigger: TAAACCTCCTGCTGACACCAACCAGATGCTGTCGCT...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTACCTGCCAGAGCTTTTTaGGAGAGCGACAGCATCTGG +
Preference number: 5 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLPARAF*ESDSIW
Trigger: CCAGATGCTGTCGCTCTCCAAAAAAGCTCTGGCAGG...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCACCAGGCCCGGGGATaGGCTAAGAGGCCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVHQARG*AKRPWG
Trigger: ACCCCAGGGCCTCTTAGCCAATCCCCGGGCCTGGTG...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGTCTTCCACCTCTGGATaGCACTGGGCCACTCCAGGG +
Preference number: 5 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWSSTSG*HWATPG
Trigger: CCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGA...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GATATAGGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCGTCAGCTTGCCTCTTaGCCAAGACCTAGGAGGCGG +
Preference number: 5 (lower is better)
Translates to: DIGSLPPLDCTGPLQGWVRQLAS*PRPRRR
Trigger: CCGCCTCCTAGGTCTTGGCAAAGAGGCAAGCTGACG...CACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS TCA 90 bp AGACAAGGTCAGCTGCGGCAACTCAGCATGTCCACCTCCAAGTTCTaGCTGAGCCAAGGGGCCCTCCAAAAACGGAGCCTCCCTTTCAAG +
Preference number: 5 (lower is better)
Translates to: RQGQLRQLSMSTSKF*LSQGALQKRSLPFK
Trigger: CTTGAAAGGGAGGCTCCGTTTTTGGAGGGCCCCTTGGCTCAGTCAGAACTTGGAGGTGGACATGCTGAGTTGCCGCAGCTGACCTTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS GCA 90 bp CTCTGGTTTGGGGTCTTGCCCTCTTCCAAGAGACCAGCAAGTCTGTaGCAATGTCTGTGTGCTCCCAGCAGACCAGCAAGACTGTGCCAG +
Preference number: 5 (lower is better)
Translates to: LWFGVLPSSKRPASL*QCLCAPSRPARLCQ
Trigger: CTGGCACAGTCTTGCTGGTCTGCTGGGAGCACACAGACATTGGCACAGACTTGCTGGTCTCTTGGAAGAGGGCAAGACCCCAAACCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 90 bp CTGACCGCACAGCTGGTTCAGGGAGCTCAGCCTGTGGTGTCAAACTaGGAATTCCTGGCTCCTTTTCCATGTCACCAATGCTGGCACTGG +
Preference number: 5 (lower is better)
Translates to: LTAQLVQGAQPVVSN*EFLAPFPCHQCWHW
Trigger: CCAGTGCCAGCATTGGTGACATGGAAAAGGAGCCAGGAATTCCCAGTTTGACACCACAGGCTGAGCTCCCTGAACCAGCTGTGCGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 90 bp TGCTGGTCGCTTGGTCAGATTGAGACAGTCTGCGTGGTAAACTTTTaGGCAGCCTGGTTTCTTGCAGGAGACGAGCTGGCCAGCATCCCC +
Preference number: 5 (lower is better)
Translates to: CWSLGQIETVCVVNF*AAWFLAGDELASIP
Trigger: GGGGATGCTGGCCAGCTCGTCTCCTGCAAGAAACCAGGCTGCCCAAAAGTTTACCACGCAGACTGTCTCAATCTGACCAAGCGACCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTCAGTCTCCTTGGGGCTaGTGGCCGTCCTGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGQSPWG*WPSCEA
Trigger: TGCCTCACAGGACGGCCACAAGCCCCAAGGAGACTG...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTGCCACAAAGGGAAAAGCACTGGTTTaGACAGCGCCCTCCGGCAGG +
Preference number: 5 (lower is better)
Translates to: HTAAKRHFLNTTTSGATKGKALV*TAPSGR
Trigger: CCTGCCGGAGGGCGCTGTCAAAACCAGTGCTTTTCC...CTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGCCAGGTTCCAGAGGATaGGGCCCACAGGGGTCATGC +
Preference number: 5 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWPGSRG*GPQGSC
Trigger: GCATGACCCCTGTGGGCCCAATCCTCTGGAACCTGG...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTCCAGGTTCCAGAGGATaGGGCCCACAGGGGTCATGC +
Preference number: 5 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGPGSRG*GPQGSC
Trigger: GCATGACCCCTGTGGGCCCAATCCTCTGGAACCTGG...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGCTGAGGGTGAGGAGCTaGGGCTGGTCACTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: PCGKVGGKRPKSVCLLGWLRVRS*GWSLER
Trigger: CCTCTCCAGTGACCAGCCCAAGCTCCTCACCCTCAG...CCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTTGGATTTATCCAGCCTaGGGTCAGCCGTCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFWIYPA*GQPSPE
Trigger: CTCTGGGGACGGCTGACCCAAGGCTGGATAAATCCA...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTTACCCTGGGGGCAGCTaGTTTGTTCATGTGACATTG +
Preference number: 5 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQAYPGGS*FVHVTL
Trigger: CAATGTCACATGAACAAACAAGCTGCCCCCAGGGTA...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCTGGTCAAAGGTTCCTGAAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTAGGAACCCGGGTTTCTaGAGCTGCCAGTCCCTCAAC +
Preference number: 5 (lower is better)
Translates to: PGQRFLKALESRLTGMRPRNPGF*SCQSLN
Trigger: GTTGAGGGACTGGCAGCTCAAGAAACCCGGGTTCCT...AGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTTCAGGAACCTTTGACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS TCA 90 bp AAGGTCAGCTGCGGCAACTCAGCATGTCCACCTCCAAGTTCTGACTaGGCCAAGGGGCCCTCCAAAAACGGAGCCTCCCTTTCAAGAACT +
Preference number: 5 (lower is better)
Translates to: KVSCGNSACPPPSSD*AKGPSKNGASLSRT
Trigger: AGTTCTTGAAAGGGAGGCTCCGTTTTTGGAGGGCCCCTTGGCTCAGTCAGAACTTGGAGGTGGACATGCTGAGTTGCCGCAGCTGACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 90 bp CGGGATCGTGTTCTACACCTTCCTCAACAGTCTCCTTGGGGCTTGTaGCCGTCCTGTGAGGCATTAGTTCTCCCTCTGAGCCTGGAATCT +
Preference number: 5 (lower is better)
Translates to: RDRVLHLPQQSPWGL*PSCEALVLPLSLES
Trigger: AGATTCCAGGCTCAGAGGGAGAACTAATGCCTCACAGGACGGCCACAAGCCCCAAGGAGACTGTTGAGGAAGGTGTAGAACACGATCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 90 bp TGGGACAAAGAGGCATGGGGTTTGTCAGTAGGCCTGTCTGAAGTCTaGGGTTTGGGACTGCTAGTAATGAGCAGTCTGTCTGGCGGCGGA +
Preference number: 5 (lower is better)
Translates to: WDKEAWGLSVGLSEV*GLGLLVMSSLSGGG
Trigger: TCCGCCGCCAGACAGACTGCTCATTACTAGCAGTCCCAAACCCCAGACTTCAGACAGGCCTACTGACAAACCCCATGCCTCTTTGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 90 bp GCAAGACTCCACCTGGTTCAGGGAGCTCAGCCTGTGGTGTCAAACTaGGAATTCCTGGCTCCTTTTCCATGTCACCAATGCTGGCACTGG +
Preference number: 5 (lower is better)
Translates to: ARLHLVQGAQPVVSN*EFLAPFPCHQCWHW
Trigger: CCAGTGCCAGCATTGGTGACATGGAAAAGGAGCCAGGAATTCCCAGTTTGACACCACAGGCTGAGCTCCCTGAACCAGGTGGAGTCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375350.3
CDS-3UTR CAA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGCCAAGGTCCCCCTTCTaGGGCATAAATCCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWPRSPF*GINPGS
Trigger: AGACCCTGGATTTATGCCCAAGAAGGGGGACCTTGG...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTGAGCACCGGAAGCCCTaGTTCTGCATAACAGTGGGT +
Preference number: 5 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFEHRKP*FCITVG
Trigger: ACCCACTGTTATGCAGAACAAGGGCTTCCGGTGCTC...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTTTGCCCATCTTATCCTaGCTGCTCACGTCACCCTCC +
Preference number: 5 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFLPILS*LLTSPS
Trigger: GGAGGGTGACGTGAGCAGCAAGGATAAGATGGGCAA...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGTTGCCCATCTTATCCTaGCTGCTCACGTCACCCTCC +
Preference number: 5 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWLPILS*LLTSPS
Trigger: GGAGGGTGACGTGAGCAGCAAGGATAAGATGGGCAA...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCGTCCCATCCACTCCTTaGCCCATCTTATCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLVPSTP*PILSLL
Trigger: CAGCAAGGATAAGATGGGCAAAGGAGTGGATGGGAC...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGGGAAAAGCACTGGTTTaGACAGCGCCCTCCGGCAGG +
Preference number: 5 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGGKALV*TAPSGR
Trigger: CCTGCCGGAGGGCGCTGTCAAAACCAGTGCTTTTCC...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGGTCACTGGAGAGGGTTaGTCGCTTAGCTGGGGTCTT +
Preference number: 5 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWVTGEG*SLSWGL
Trigger: AAGACCCCAGCTAAGCGACAAACCCTCTCCAGTGAC...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCTGGCAGGCCATGAACTaGACTCCAACACTGGCATCT +
Preference number: 5 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLWQAMN*TPTLAS
Trigger: AGATGCCAGTGTTGGAGTCAAGTTCATGGCCTGCCA...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GATATAGGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCTCTGGTTTGGGGTCTaGCCCTCTTCCAAGAGACCA +
Preference number: 5 (lower is better)
Translates to: DIGSLPPLDCTGPLQGWVLWFGV*PSSKRP
Trigger: TGGTCTCTTGGAAGAGGGCAAGACCCCAAACCAGAG...CACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTAGTCTGTCTGTCTCCTaGGTTGGGGCCCACTGGATT +
Preference number: 5 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFSLSVS*VGAHWI
Trigger: AATCCAGTGGGCCCCAACCAAGGAGACAGACAGACT...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTCCACAGCCAACAGCCTaGCTGGCCTCAATGCAGCAC +
Preference number: 5 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGPQPTA*LASMQH
Trigger: GTGCTGCATTGAGGCCAGCAAGGCTGTTGGCTGTGG...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACTCTTCCACCTCTGGATaGCACTGGGCCACTCCAGGG +
Preference number: 5 (lower is better)
Translates to: KALESRLTGMRPVSLISDSSTSG*HWATPG
Trigger: CCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGA...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTCTTGTCCACGAAACTTaGCTGAACTTCCAGGACCTT +
Preference number: 5 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQALVHET*LNFQDL
Trigger: AAGGTCCTGGAAGTTCAGCAAAGTTTCGTGGACAAG...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS CCA 90 bp GATGCAAGGATCTTTGACCCAGCAGCCAGGCAAAAGTCATTGGCGTaGTATGCCACAGGACAGCGGACACAGCGCATCAACCGACCTTTA +
Preference number: 5 (lower is better)
Translates to: DARIFDPAARQKSLA*YATGQRTQRINRPL
Trigger: TAAAGGTCGGTTGATGCGCTGTGTCCGCTGTCCTGTGGCATACCACGCCAATGACTTTTGCCTGGCTGCTGGGTCAAAGATCCTTGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGGCAGGGAGGTCTCTCTaGTCGGACAGTAAGCCAGGT +
Preference number: 5 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWAGRSL*SDSKPG
Trigger: ACCTGGCTTACTGTCCGACAAGAGAGACCTCCCTGC...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTGGTCACCATCTTCACTaGTTAAGTGGCCCATTATCT +
Preference number: 5 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQAGHHLH*LSGPLS
Trigger: AGATAATGGGCCACTTAACAAGTGAAGATGGTGACC...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTTCCTCAACAGTCTCCTaGGGGCTTGTGGCCGTCCTG +
Preference number: 5 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVSSTVS*GLVAVL
Trigger: CAGGACGGCCACAAGCCCCAAGGAGACTGTTGAGGA...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGTCCTCAACAGTCTCCTaGGGGCTTGTGGCCGTCCTG +
Preference number: 5 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWSSTVS*GLVAVL
Trigger: CAGGACGGCCACAAGCCCCAAGGAGACTGTTGAGGA...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTGCCACAAAGGAGCACCGGAAGCCCTaGTTCTGCATAACAGTGGGT +
Preference number: 5 (lower is better)
Translates to: HTAAKRHFLNTTTSGATKEHRKP*FCITVG
Trigger: ACCCACTGTTATGCAGAACAAGGGCTTCCGGTGCTC...CTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGAAAAGCACTGGTTTaGACAGCGCCCTCCGGCAGG +
Preference number: 5 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLGKALV*TAPSGR
Trigger: CCTGCCGGAGGGCGCTGTCAAAACCAGTGCTTTTCC...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTATTCAACCTCTGGATATaGGCGCTTGGAAAAGCACTG +
Preference number: 5 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLFNLWI*ALGKAL
Trigger: CAGTGCTTTTCCAAGCGCCAATATCCAGAGGTTGAA...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCTTCCGTGGCAATGGGTaGATTCTTTGGCCTTACACC +
Preference number: 5 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLFRGNG*ILWPYT
Trigger: GGTGTAAGGCCAAAGAATCAACCCATTGCCACGGAA...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCTGCGTGGTAAACTTTaGGGCAGCCTGGTTTCTTGC +
Preference number: 5 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFLRGKL*GSLVSC
Trigger: GCAAGAAACCAGGCTGCCCAAAAGTTTACCACGCAG...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCACCAAGGATTGGGATTaGGTCCCTGACCCAGCGAGG +
Preference number: 5 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFTKDWD*VPDPAR
Trigger: CCTCGCTGGGTCAGGGACCAAATCCCAATCCTTGGT...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTACCAAGGATTGGGATTaGGTCCCTGACCCAGCGAGG +
Preference number: 5 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGTKDWD*VPDPAR
Trigger: CCTCGCTGGGTCAGGGACCAAATCCCAATCCTTGGT...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGTCTGAAGTCTGGGGTTaGGGACTGCTAGTAATGAGC +
Preference number: 5 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWSEVWG*GLLVMS
Trigger: GCTCATTACTAGCAGTCCCAAACCCCAGACTTCAGA...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTGGCAGGCCATGAACTaGACTCCAACACTGGCATCT +
Preference number: 5 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFWQAMN*TPTLAS
Trigger: AGATGCCAGTGTTGGAGTCAAGTTCATGGCCTGCCA...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTTGGCAGGCCATGAACTaGACTCCAACACTGGCATCT +
Preference number: 5 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFWQAMN*TPTLAS
Trigger: AGATGCCAGTGTTGGAGTCAAGTTCATGGCCTGCCA...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTGAGAGACCTAAAAGATaGCCCACTCTTGGCGGCAAG +
Preference number: 5 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFERPKR*PTLGGK
Trigger: CTTGCCGCCAAGAGTGGGCAATCTTTTAGGTCTCTC...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGGAGAGACCTAAAAGATaGCCCACTCTTGGCGGCAAG +
Preference number: 5 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWERPKR*PTLGGK
Trigger: CTTGCCGCCAAGAGTGGGCAATCTTTTAGGTCTCTC...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTGAGAGACCTAAAAGATaGCCCACTCTTGGCGGCAAG +
Preference number: 5 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFERPKR*PTLGGK
Trigger: CTTGCCGCCAAGAGTGGGCAATCTTTTAGGTCTCTC...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GATATAGGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGTGTCTGTCTCCTTGGTaGGGGCCCACTGGATTTTCA +
Preference number: 5 (lower is better)
Translates to: DIGSLPPLDCTGPLQGWVCLSPW*GPTGFS
Trigger: TGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACA...CACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCCACAGCCAACAGCCTaGCTGGCCTCAATGCAGCAC +
Preference number: 5 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVPQPTA*LASMQH
Trigger: GTGCTGCATTGAGGCCAGCAAGGCTGTTGGCTGTGG...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTAATGTCTATCGTCAGCTaGCCTCTTTGCCAAGACCTA +
Preference number: 5 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLMSIVS*PLCQDL
Trigger: TAGGTCTTGGCAAAGAGGCAAGCTGACGATAGACAT...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS TCA 90 bp GAGTCTCTGGGACAAAGAGGCATGGGGTTTGTCAGTAGGCCTGTCTaGAGTCTGGGGTTTGGGACTGCTAGTAATGAGCAGTCTGTCTGG +
Preference number: 5 (lower is better)
Translates to: ESLGQRGMGFVSRPV*SLGFGTASNEQSVW
Trigger: CCAGACAGACTGCTCATTACTAGCAGTCCCAAACCCCAGACTTCAGACAGGCCTACTGACAAACCCCATGCCTCTTTGTCCCAGAGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS GCA 90 bp CTTGCTGAAGGAGTTCTATGCTCTGGAAACTCATCCCGCCCCTCCTaGACAGGGTCACTAGGAAGTAAGACCCTAAAGGCACACTCAGAG +
Preference number: 5 (lower is better)
Translates to: LAEGVLCSGNSSRPS*TGSLGSKTLKAHSE
Trigger: CTCTGAGTGTGCCTTTAGGGTCTTACTTCCTAGTGACCCTGTGCAGGAGGGGCGGGATGAGTTTCCAGAGCATAGAACTCCTTCAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS GCA 90 bp TGCTCTGTCAGTGGTTCCTCAAGTATGCTTGCTGAAGGAGTTCTATaGTCTGGAAACTCATCCCGCCCCTCCTGCACAGGGTCACTAGGA +
Preference number: 5 (lower is better)
Translates to: CSVSGSSSMLAEGVL*SGNSSRPSCTGSLG
Trigger: TCCTAGTGACCCTGTGCAGGAGGGGCGGGATGAGTTTCCAGAGCATAGAACTCCTTCAGCAAGCATACTTGAGGAACCACTGACAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 90 bp CACAGCCTTTCTCAACAGCTCTCGGCATATGCCCCAGACCTTTGCTaGCAGGCCATGAACTTGACTCCAACACTGGCATCTTCTCATCAG +
Preference number: 5 (lower is better)
Translates to: HSLSQQLSAYAPDLC*QAMNLTPTLASSHQ
Trigger: CTGATGAGAAGATGCCAGTGTTGGAGTCAAGTTCATGGCCTGCCAGCAAAGGTCTGGGGCATATGCCGAGAGCTGTTGAGAAAGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 90 bp TGGGTGACAGAGCAAGACTCCACCTGGTTCAGGGAGCTCAGCCTGTaGTGTCAAACTGGGAATTCCTGGCTCCTTTTCCATGTCACCAAT +
Preference number: 5 (lower is better)
Translates to: WVTEQDSTWFRELSL*CQTGNSWLLFHVTN
Trigger: ATTGGTGACATGGAAAAGGAGCCAGGAATTCCCAGTTTGACACCACAGGCTGAGCTCCCTGAACCAGGTGGAGTCTTGCTCTGTCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375350.3
CDS-3UTR CAA 90 bp GATATAGGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCACCATGGGCGTCTCTaGAATTTTGCCCAGATGAGA +
Preference number: 5 (lower is better)
Translates to: DIGSLPPLDCTGPLQGWVHHGRL*NFAQMR
Trigger: TCTCATCTGGGCAAAATTCAAGAGACGCCCATGGTG...CACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCTTCCTGGGGCAGTGTaGGACCCTGTGAGGCTATTT +
Preference number: 5 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGLPGAV*DPVRLF
Trigger: AAATAGCCTCACAGGGTCCAACACTGCCCCAGGAAG...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCTGGTCAAAGGTTCCTGAAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTAAGAGACCAGGTTTaGAGCAGTCATCAACCGCTG +
Preference number: 5 (lower is better)
Translates to: PGQRFLKALESRLTGMRPVRDQV*SSHQPL
Trigger: CAGCGGTTGATGACTGCTCAAAACCTGGTCTCTTAC...AGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTTCAGGAACCTTTGACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGCCCTTTTTCTCTGAATaGTGTGTGGAGCCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWPFFSE*CVEPPE
Trigger: TTCAGGAGGCTCCACACACAATTCAGAGAAAAAGGG...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTGCAGGGAGGTCTCTCTaGTCGGACAGTAAGCCAGGT +
Preference number: 5 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVAGRSL*SDSKPG
Trigger: ACCTGGCTTACTGTCCGACAAGAGAGACCTCCCTGC...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAGCAGGGAGGTCTCTCTaGTCGGACAGTAAGCCAGGT +
Preference number: 5 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSAGRSL*SDSKPG
Trigger: ACCTGGCTTACTGTCCGACAAGAGAGACCTCCCTGC...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GATATAGGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGATTTGGATGAAGGCTTaGATCGTCCACAGTTGCGCC +
Preference number: 5 (lower is better)
Translates to: DIGSLPPLDCTGPLQGWVIWMKA*IVHSCA
Trigger: GGCGCAACTGTGGACGATCAAAGCCTTCATCCAAAT...CACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCTGGTCAAAGGTTCCTGAAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGCAGTCAGCATGATTTaGCTCTGTCAGTGGTTCCTC +
Preference number: 5 (lower is better)
Translates to: PGQRFLKALESRLTGMRPAVSMI*LCQWFL
Trigger: GAGGAACCACTGACAGAGCAAAATCATGCTGACTGC...AGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTTCAGGAACCTTTGACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCACAGCGGGAACTTACCTaGTGCACCTGCTCCTGTACC +
Preference number: 5 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSQRELT*CTCSCT
Trigger: GGTACAGGAGCAGGTGCACAAGGTAAGTTCCCGCTG...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGCCAGGCAAAAGTCATaGGCGTGGTATGCCACAGGA +
Preference number: 5 (lower is better)
Translates to: PCGKVGGKRPKSVCLLGWARQKS*AWYATG
Trigger: TCCTGTGGCATACCACGCCAATGACTTTTGCCTGGC...CCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCGCCAGGCAAAAGTCATaGGCGTGGTATGCCACAGGA +
Preference number: 5 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFARQKS*AWYATG
Trigger: TCCTGTGGCATACCACGCCAATGACTTTTGCCTGGC...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTCCTGCTTTACAGTCATaGCAATACCAGTTTCCTTCA +
Preference number: 5 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQAPALQS*QYQFPS
Trigger: TGAAGGAAACTGGTATTGCAATGACTGTAAAGCAGG...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTACTCATCTTATCAATGTaGGAAGGAACAGCTCGAGGA +
Preference number: 5 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLLILSM*EGTARG
Trigger: TCCTCGAGCTGTTCCTTCCAACATTGATAAGATGAG...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGTTGCCCATCTTATCCTaGCTGCTCACGTCACCCTCC +
Preference number: 5 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGLPILS*LLTSPS
Trigger: GGAGGGTGACGTGAGCAGCAAGGATAAGATGGGCAA...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTGCCACAAAGCTGCGTGGTAAACTTTaGGGCAGCCTGGTTTCTTGC +
Preference number: 5 (lower is better)
Translates to: HTAAKRHFLNTTTSGATKLRGKL*GSLVSC
Trigger: GCAAGAAACCAGGCTGCCCAAAAGTTTACCACGCAG...CTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACGAGCAGCCATTCCTGTaGATTGCTCTGCCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: KALESRLTGMRPVSLISDEQPFL*IALPGE
Trigger: CTCACCTGGCAGAGCAATCAACAGGAATGGCTGCTC...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCTGCCAGAGCTTTTTaGGAGAGCGACAGCATCTGG +
Preference number: 5 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGPARAF*ESDSIW
Trigger: CCAGATGCTGTCGCTCTCCAAAAAAGCTCTGGCAGG...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGGTCACTGGAGAGGGTTaGTCGCTTAGCTGGGGTCTT +
Preference number: 5 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWVTGEG*SLSWGL
Trigger: AAGACCCCAGCTAAGCGACAAACCCTCTCCAGTGAC...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGTGGATTTATCCAGCCTaGGGTCAGCCGTCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWWIYPA*GQPSPE
Trigger: CTCTGGGGACGGCTGACCCAAGGCTGGATAAATCCA...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCTGAAGTCTGGGGTTaGGGACTGCTAGTAATGAGC +
Preference number: 5 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFSEVWG*GLLVMS
Trigger: GCTCATTACTAGCAGTCCCAAACCCCAGACTTCAGA...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGCAGGGCCCAGGGACTTaGCTCTGTGGTTACCAACTT +
Preference number: 5 (lower is better)
Translates to: PCGKVGGKRPKSVCLLGWQGPGT*LCGYQL
Trigger: AAGTTGGTAACCACAGAGCAAAGTCCCTGGGCCCTG...CCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAGTCTGTCTGTCTCCTaGGTTGGGGCCCACTGGATT +
Preference number: 5 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFSLSVS*VGAHWI
Trigger: AATCCAGTGGGCCCCAACCAAGGAGACAGACAGACT...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGAGTCTGTCTGTCTCCTaGGTTGGGGCCCACTGGATT +
Preference number: 5 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWSLSVS*VGAHWI
Trigger: AATCCAGTGGGCCCCAACCAAGGAGACAGACAGACT...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTGCCACAAAGGTTGGGGAAATCGCTTaGAGAGCCCCTATACCTTCC +
Preference number: 5 (lower is better)
Translates to: HTAAKRHFLNTTTSGATKVGEIA*RAPIPS
Trigger: GGAAGGTATAGGGGCTCTCAAAGCGATTTCCCCAAC...CTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAGGTTCCTGAAAGCCTaGGAATCCAGGCTCACAGGG +
Preference number: 5 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFRFLKA*ESRLTG
Trigger: CCCTGTGAGCCTGGATTCCAAGGCTTTCAGGAACCT...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTCTCCAAGGACTGATCTaGAGACTCTGCACAGCCCAG +
Preference number: 5 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGLQGLI*RLCTAQ
Trigger: CTGGGCTGTGCAGAGTCTCAAGATCAGTCCTTGGAG...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS TCA 90 bp GATAATGCAGAGTCACCCCCACTAGGGCTAGGATTGGCGGAGTTCTaGGTGCCATCTCCCTTTTTCTCTGAATTGTGTGTGGAGCCTCCT +
Preference number: 5 (lower is better)
Translates to: DNAESPPLGLGLAEF*VPSPFFSELCVEPP
Trigger: AGGAGGCTCCACACACAATTCAGAGAAAAAGGGAGATGGCACTCAGAACTCCGCCAATCCTAGCCCTAGTGGGGGTGACTCTGCATTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS GCA 90 bp ACATTCCCATTTCCCTGCTGGTCGCTTGGTCAGATTGAGACAGTCTaGGTGGTAAACTTTTGGGCAGCCTGGTTTCTTGCAGGAGACGAG +
Preference number: 5 (lower is better)
Translates to: TFPFPCWSLGQIETV*VVNFWAAWFLAGDE
Trigger: CTCGTCTCCTGCAAGAAACCAGGCTGCCCAAAAGTTTACCACGCAGACTGTCTCAATCTGACCAAGCGACCAGCAGGGAAATGGGAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS GCA 90 bp ACACACAGCCTTTCTCAACAGCTCTCGGCATATGCCCCAGACCTTTaGTGGCAGGCCATGAACTTGACTCCAACACTGGCATCTTCTCAT +
Preference number: 5 (lower is better)
Translates to: THSLSQQLSAYAPDL*WQAMNLTPTLASSH
Trigger: ATGAGAAGATGCCAGTGTTGGAGTCAAGTTCATGGCCTGCCAGCAAAGGTCTGGGGCATATGCCGAGAGCTGTTGAGAAAGGCTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 90 bp AGAGGACTGGGAACTCTCCCACATCATGTCTCATCTTATCAATGTTaGAAGGAACAGCTCGAGGATGGCAGATCTCAGCTGGCCACCACC +
Preference number: 5 (lower is better)
Translates to: RGLGTLPHHVSSYQC*KEQLEDGRSQLATT
Trigger: GGTGGTGGCCAGCTGAGATCTGCCATCCTCGAGCTGTTCCTTCCAACATTGATAAGATGAGACATGATGTGGGAGAGTTCCCAGTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
ENST00000503056.5
ENST00000508029.5
ENST00000515735.1
CDS CCA 90 bp CTTGGTCAGATTGAGACAGTCTGCGTGGTAAACTTTTGGGCAGCCTaGTTTCTTGCAGGAGACGAGCTGGCCAGCATCCCCACAACTAAA +
Preference number: 5 (lower is better)
Translates to: LGQIETVCVVNFWAA*FLAGDELASIPTTK
Trigger: TTTAGTTGTGGGGATGCTGGCCAGCTCGTCTCCTGCAAGAAACCAGGCTGCCCAAAAGTTTACCACGCAGACTGTCTCAATCTGACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 90 bp GATTTGGTCCCTGACCCAGCGAGGTCTCTGACCTTATCTAAAGGCTaGGGCCTGGAGTCAGTTCTCTCAAGAGGTCTTTCAGGTAGCAAT +
Preference number: 5 (lower is better)
Translates to: DLVPDPARSLTLSKG*GLESVLSRGLSGSN
Trigger: ATTGCTACCTGAAAGACCTCTTGAGAGAACTGACTCCAGGCCCCAGCCTTTAGATAAGGTCAGAGACCTCGCTGGGTCAGGGACCAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGCCGAAAGGGCTGTCCTaGTCTTCAGGGGCATCTAAA +
Preference number: 5 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWPKGLS*SSGASK
Trigger: TTTAGATGCCCCTGAAGACAAGGACAGCCCTTTCGG...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTGCCACAAAGACACACCAGGCTTCGTaGGGGTTTATTCTTCTCTCG +
Preference number: 5 (lower is better)
Translates to: HTAAKRHFLNTTTSGATKTHQAS*GFILLS
Trigger: CGAGAGAAGAATAAACCCCAACGAAGCCTGGTGTGT...CTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ATTGCTTTTCCAGCCACCCAGGCTCTCTCAGAAGGATCTCCAAAAGCCTCCACGACACACCAGGCTTCGTaGGGGTTTATTCTTCTCTCG +
Preference number: 5 (lower is better)
Translates to: IAFPATQALSEGSPKASTTHQAS*GFILLS
Trigger: CGAGAGAAGAATAAACCCCAACGAAGCCTGGTGTGT...CGTGGAGGCTTTTGGAGATCCTTCTGAGAGAGCCTGGGTGGCTGGAAAAGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638627.2
CDS-3UTR CAA 90 bp CCTGGTCAAAGGTTCCTGAAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTCCCTTTTTCTCTGAATaGTGTGTGGAGCCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: PGQRFLKALESRLTGMRPPFFSE*CVEPPE
Trigger: TTCAGGAGGCTCCACACACAATTCAGAGAAAAAGGG...AGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTTCAGGAACCTTTGACCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCTGGTCAAAGGTTCCTGAAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTTTTGATCGTCCACAGTaGCGCCTAGTAACACAGTCT +
Preference number: 5 (lower is better)
Translates to: PGQRFLKALESRLTGMRPFDRPQ*RLVTQS
Trigger: AGACTGTGTTACTAGGCGCAACTGTGGACGATCAAA...AGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTTCAGGAACCTTTGACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTTTGATCGTCCACAGTaGCGCCTAGTAACACAGTCT +
Preference number: 5 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFFDRPQ*RLVTQS
Trigger: AGACTGTGTTACTAGGCGCAACTGTGGACGATCAAA...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCCAACAACCAGAGCTCTCTAACAACCTGCTCCAGGCAGCGTGGACGGAGGCTAAAAGCATCTCGCAATTaGGATGAAGGCTTTGATCGT +
Preference number: 5 (lower is better)
Translates to: PNNQSSLTTCSRQRGRRLKASRN*DEGFDR
Trigger: ACGATCAAAGCCTTCATCCAAATTGCGAGATGCTTT...TAGCCTCCGTCCACGCTGCCTGGAGCAGGTTGTTAGAGAGCTCTGGTTGTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCGGTCACCATCTTCACTaGTTAAGTGGCCCATTATCT +
Preference number: 5 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLGHHLH*LSGPLS
Trigger: AGATAATGGGCCACTTAACAAGTGAAGATGGTGACC...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTTTTACCAGGATCAGATaGCTTAACCTTGCTATCGAA +
Preference number: 5 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQAFTRIR*LNLAIE
Trigger: TTCGATAGCAAGGTTAAGCAATCTGATCCTGGTAAA...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGGTTCCTCAAGTATGCTaGCTGAAGGAGTTCTATGCT +
Preference number: 5 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWVPQVC*LKEFYA
Trigger: AGCATAGAACTCCTTCAGCAAGCATACTTGAGGAAC...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCACCAAGGTCCCCCTTCTaGGGCATAAATCCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSPRSPF*GINPGS
Trigger: AGACCCTGGATTTATGCCCAAGAAGGGGGACCTTGG...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGAGCACCGGAAGCCCTaGTTCTGCATAACAGTGGGT +
Preference number: 5 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVEHRKP*FCITVG
Trigger: ACCCACTGTTATGCAGAACAAGGGCTTCCGGTGCTC...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAGCCAGGCAAAAGTCATaGGCGTGGTATGCCACAGGA +
Preference number: 5 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSARQKS*AWYATG
Trigger: TCCTGTGGCATACCACGCCAATGACTTTTGCCTGGC...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGTCCCATCCACTCCTTaGCCCATCTTATCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGVPSTP*PILSLL
Trigger: CAGCAAGGATAAGATGGGCAAAGGAGTGGATGGGAC...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGCTGCGTGGTAAACTTTaGGGCAGCCTGGTTTCTTGC +
Preference number: 5 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWLRGKL*GSLVSC
Trigger: GCAAGAAACCAGGCTGCCCAAAAGTTTACCACGCAG...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGTTCCCTGCTGGTCGCTaGGTCAGATTGAGACAGTCT +
Preference number: 5 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGFPAGR*VRLRQS
Trigger: AGACTGTCTCAATCTGACCAAGCGACCAGCAGGGAA...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTGAGCAGCCATTCCTGTaGATTGCTCTGCCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGEQPFL*IALPGE
Trigger: CTCACCTGGCAGAGCAATCAACAGGAATGGCTGCTC...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTAGCGACAGCATCTGGTaGGTGTCAGCAGGAGGTTTA +
Preference number: 5 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGSDSIW*VSAGGL
Trigger: TAAACCTCCTGCTGACACCAACCAGATGCTGTCGCT...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTGCCACAAAGAAAGAGGCATGGGGTTaGTCAGTAGGCCTGTCTGAA +
Preference number: 5 (lower is better)
Translates to: HTAAKRHFLNTTTSGATKKEAWG*SVGLSE
Trigger: TTCAGACAGGCCTACTGACAAACCCCATGCCTCTTT...CTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGTTCCTGAGGCCTGAGTaGTTGGCTCATATAAAAAGG +
Preference number: 5 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWFLRPE*LAHIKR
Trigger: CCTTTTTATATGAGCCAACAACTCAGGCCTCAGGAA...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGAAAGATTGCCCACTCTaGGCGGCAAGTGCAGGTAGT +
Preference number: 5 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGKDCPL*AASAGS
Trigger: ACTACCTGCACTTGCCGCCAAGAGTGGGCAATCTTT...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGCTCTGGTTTGGGGTCTaGCCCTCTTCCAAGAGACCA +
Preference number: 5 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLLWFGV*PSSKRP
Trigger: TGGTCTCTTGGAAGAGGGCAAGACCCCAAACCAGAG...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGCTCTGGTTTGGGGTCTaGCCCTCTTCCAAGAGACCA +
Preference number: 5 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWLWFGV*PSSKRP
Trigger: TGGTCTCTTGGAAGAGGGCAAGACCCCAAACCAGAG...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCTGGTCAAAGGTTCCTGAAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTAGCTGGAAGTGTATTTaGCTCTGGTTTGGGGTCTTG +
Preference number: 5 (lower is better)
Translates to: PGQRFLKALESRLTGMRPSWKCI*LWFGVL
Trigger: CAAGACCCCAAACCAGAGCAAAATACACTTCCAGCT...AGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTTCAGGAACCTTTGACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGAGGTTCCTGAAAGCCTaGGAATCCAGGCTCACAGGG +
Preference number: 5 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWRFLKA*ESRLTG
Trigger: CCCTGTGAGCCTGGATTCCAAGGCTTTCAGGAACCT...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTCTTGTCCACGAAACTTaGCTGAACTTCCAGGACCTT +
Preference number: 5 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFLVHET*LNFQDL
Trigger: AAGGTCCTGGAAGTTCAGCAAAGTTTCGTGGACAAG...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACGGCAAGAATGGCGATTaGACTGCACCGTGTCTACTC +
Preference number: 5 (lower is better)
Translates to: KALESRLTGMRPVSLISDGKNGD*TAPCLL
Trigger: GAGTAGACACGGTGCAGTCAAATCGCCATTCTTGCC...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439151.7
CDS GCA 90 bp CCGTGGCAATGGGTTGATTCTTTGGCCTTACACCCAAGAAGCCACTaGAGTTCGGGGCTCCACATTTGCAAACAGTCTTTCCATTCCCAA +
Preference number: 5 (lower is better)
Translates to: PWQWVDSLALHPRSH*SSGLHICKQSFHSQ
Trigger: TTGGGAATGGAAAGACTGTTTGCAAATGTGGAGCCCCGAACTGCAGTGGCTTCTTGGGTGTAAGGCCAAAGAATCAACCCATTGCCACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
ENST00000513736.1
CDS CCA 90 bp AGCTGGTTCAGGGAGCTCAGCCTGTGGTGTCAAACTGGGAATTCCTaGCTCCTTTTCCATGTCACCAATGCTGGCACTGGATTTATCACA +
Preference number: 5 (lower is better)
Translates to: SWFRELSLWCQTGNS*LLFHVTNAGTGFIT
Trigger: TGTGATAAATCCAGTGCCAGCATTGGTGACATGGAAAAGGAGCCAGGAATTCCCAGTTTGACACCACAGGCTGAGCTCCCTGAACCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 90 bp TTCTGGTCCACAGGCCTCAGTGCTTTTTCTTTAGCTACAAGGGTCTaGACCACAGCTGATAGTACTTTCTCAGGAGGTGGGAGTCTCTGG +
Preference number: 5 (lower is better)
Translates to: FWSTGLSAFSLATRV*TTADSTFSGGGSLW
Trigger: CCAGAGACTCCCACCTCCTGAGAAAGTACTATCAGCTGTGGTCCAGACCCTTGTAGCTAAAGAAAAAGCACTGAGGCCTGTGGACCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACCACCATGGGCGTCTCTaGAATTTTGCCCAGATGAGA +
Preference number: 5 (lower is better)
Translates to: KALESRLTGMRPVSLISDHHGRL*NFAQMR
Trigger: TCTCATCTGGGCAAAATTCAAGAGACGCCCATGGTG...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGACACACCAGGCTTCGTaGGGGTTTATTCTTCTCTCG +
Preference number: 5 (lower is better)
Translates to: PCGKVGGKRPKSVCLLGWTHQAS*GFILLS
Trigger: CGAGAGAAGAATAAACCCCAACGAAGCCTGGTGTGT...CCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGGTAAGAGACCAGGTTTaGAGCAGTCATCAACCGCTG +
Preference number: 5 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWVRDQV*SSHQPL
Trigger: CAGCGGTTGATGACTGCTCAAAACCTGGTCTCTTAC...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGATTTGGATGAAGGCTTaGATCGTCCACAGTTGCGCC +
Preference number: 5 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGIWMKA*IVHSCA
Trigger: GGCGCAACTGTGGACGATCAAAGCCTTCATCCAAAT...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGGCAGTCAGCATGATTTaGCTCTGTCAGTGGTTCCTC +
Preference number: 5 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWAVSMI*LCQWFL
Trigger: GAGGAACCACTGACAGAGCAAAATCATGCTGACTGC...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGCAGGCTCCAGGGTCTAAATCATaGGATTCAAGAAGTTTCTTA +
Preference number: 5 (lower is better)
Translates to: GSLPPLDCTGPLQGWVQAPGSKS*DSRSFL
Trigger: TAAGAAACTTCTTGAATCCAATGATTTAGACCCTGG...AGCCTGCACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGTTTCGCTTCCTTGGCTaGTCAAATATCTTGGTAGTG +
Preference number: 5 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWFRFLG*SNILVV
Trigger: CACTACCAAGATATTTGACAAGCCAAGGAAGCGAAA...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTGTCGTTTTCGCTTCCTaGGCTTGTCAAATATCTTGG +
Preference number: 5 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFVVFAS*ACQISW
Trigger: CCAAGATATTTGACAAGCCAAGGAAGCGAAAACGAC...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGTCCCATCCACTCCTTaGCCCATCTTATCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLVPSTP*PILSLL
Trigger: CAGCAAGGATAAGATGGGCAAAGGAGTGGATGGGAC...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTTCCGTGGCAATGGGTaGATTCTTTGGCCTTACACC +
Preference number: 5 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGFRGNG*ILWPYT
Trigger: GGTGTAAGGCCAAAGAATCAACCCATTGCCACGGAA...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGAAAGAGGCATGGGGTTaGTCAGTAGGCCTGTCTGAA +
Preference number: 5 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWKEAWG*SVGLSE
Trigger: TTCAGACAGGCCTACTGACAAACCCCATGCCTCTTT...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTATATGCCCCAGACCTTaGCTGGCAGGCCATGAACTT +
Preference number: 5 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVICPRP*LAGHEL
Trigger: AAGTTCATGGCCTGCCAGCAAAGGTCTGGGGCATAT...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTAAAGATTGCCCACTCTaGGCGGCAAGTGCAGGTAGT +
Preference number: 5 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVKDCPL*AASAGS
Trigger: ACTACCTGCACTTGCCGCCAAGAGTGGGCAATCTTT...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CAGGAAATCGCCACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGCAGGGCCCAGGGACTTaGCTCTGTGGTTACCAACTT +
Preference number: 5 (lower is better)
Translates to: QEIATDLKEHHFLPRVPRQGPGT*LCGYQL
Trigger: AAGTTGGTAACCACAGAGCAAAGTCCCTGGGCCCTG...CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGTACCCTGGGGGCAGCTaGTTTGTTCATGTGACATTG +
Preference number: 5 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGYPGGS*FVHVTL
Trigger: CAATGTCACATGAACAAACAAGCTGCCCCCAGGGTA...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGTACCCTGGGGGCAGCTaGTTTGTTCATGTGACATTG +
Preference number: 5 (lower is better)
Translates to: PCGKVGGKRPKSVCLLGWYPGGS*FVHVTL
Trigger: CAATGTCACATGAACAAACAAGCTGCCCCCAGGGTA...CCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTTGTCTGTCTCCTTGGTaGGGGCCCACTGGATTTTCA +
Preference number: 5 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVCLSPW*GPTGFS
Trigger: TGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACA...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCGAAATCGCCACTGATTaGAAAGAACACCATTTCCTC +
Preference number: 5 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLEIATD*KEHHFL
Trigger: GAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTC...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CTCAGAAGGATCTCCAAAAGCCTCCACGTAGTACTGCCGATAGGGCCTCCGGTTACATCAACAACACGTTaGCCCCAGGAACTTCAAACA +
Preference number: 5 (lower is better)
Translates to: LRRISKSLHVVLPIGPPVTSTTR*PQELQT
Trigger: TGTTTGAAGTTCCTGGGGCAAACGTGTTGTTGATGT...AACCGGAGGCCCTATCGGCAGTACTACGTGGAGGCTTTTGGAGATCCTTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644863.1
CDS-3UTR CAA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCACACCATGGGCGTCTCTaGAATTTTGCCCAGATGAGA +
Preference number: 5 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSHHGRL*NFAQMR
Trigger: TCTCATCTGGGCAAAATTCAAGAGACGCCCATGGTG...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGTCTTCACTGTCCAACTaGATTGAACCAGGAATACAT +
Preference number: 5 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWSSLSN*IEPGIH
Trigger: ATGTATTCCTGGTTCAATCAAGTTGGACAGTGAAGA...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTCTCTCGAGAACACTTaGAGATCAAAGCACCCTCAG +
Preference number: 5 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWSLENT*RSKHPQ
Trigger: CTGAGGGTGCTTTGATCTCAAAGTGTTCTCGAGAGA...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGTCTCTCGAGAACACTTaGAGATCAAAGCACCCTCAG +
Preference number: 5 (lower is better)
Translates to: PCGKVGGKRPKSVCLLGWSLENT*RSKHPQ
Trigger: CTGAGGGTGCTTTGATCTCAAAGTGTTCTCGAGAGA...CCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGTCTCTCGAGAACACTTaGAGATCAAAGCACCCTCAG +
Preference number: 5 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGSLENT*RSKHPQ
Trigger: CTGAGGGTGCTTTGATCTCAAAGTGTTCTCGAGAGA...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGAGCAGAGCTTCACTTTaGAACCACACACCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLSRASL*NHTPGF
Trigger: GAAGCCTGGTGTGTGGTTCAAAAGTGAAGCTCTGCT...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGAGCAGAGCTTCACTTTaGAACCACACACCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWSRASL*NHTPGF
Trigger: GAAGCCTGGTGTGTGGTTCAAAAGTGAAGCTCTGCT...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGATGCTTGATGACAGGTaGAATTTTGGAGAGAGAGCA +
Preference number: 5 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWMLDDR*NFGERA
Trigger: TGCTCTCTCTCCAAAATTCAACCTGTCATCAAGCAT...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTGTAAGAGACCAGGTTTaGAGCAGTCATCAACCGCTG +
Preference number: 5 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVVRDQV*SSHQPL
Trigger: CAGCGGTTGATGACTGCTCAAAACCTGGTCTCTTAC...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGCCCTTTTTCTCTGAATaGTGTGTGGAGCCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGPFFSE*CVEPPE
Trigger: TTCAGGAGGCTCCACACACAATTCAGAGAAAAAGGG...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTAAAGCATCTCGCAATTaGGATGAAGGCTTTGATCGT +
Preference number: 5 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFKASRN*DEGFDR
Trigger: ACGATCAAAGCCTTCATCCAAATTGCGAGATGCTTT...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCTCAGATTGCTTAACCTaGCTATCGAAATGCACATCA +
Preference number: 5 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLSDCLT*LSKCTS
Trigger: TGATGTGCATTTCGATAGCAAGGTTAAGCAATCTGA...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGCTTTTTAGGCACCACTaGATTTACACCATTGAGTTC +
Preference number: 5 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWLFRHH*IYTIEF
Trigger: GAACTCAATGGTGTAAATCAAGTGGTGCCTAAAAAG...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAGCAGTCAGCATGATTTaGCTCTGTCAGTGGTTCCTC +
Preference number: 5 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSAVSMI*LCQWFL
Trigger: GAGGAACCACTGACAGAGCAAAATCATGCTGACTGC...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCTATTCCAAAAGCCACTaGCTTGGCTTCCTAAGGCGT +
Preference number: 5 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFYSKSH*LGFLRR
Trigger: ACGCCTTAGGAAGCCAAGCAAGTGGCTTTTGGAATA...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTATTCCAAAAGCCACTaGCTTGGCTTCCTAAGGCGT +
Preference number: 5 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGYSKSH*LGFLRR
Trigger: ACGCCTTAGGAAGCCAAGCAAGTGGCTTTTGGAATA...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTCAGCGGGAACTTACCTaGTGCACCTGCTCCTGTACC +
Preference number: 5 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPQRELT*CTCSCT
Trigger: GGTACAGGAGCAGGTGCACAAGGTAAGTTCCCGCTG...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GTGTGTCTAGCTCAGAGCTTGCCAGAGATTCCCTATGTCCACTGCCCGAGGCTCACTGGAGGCTCTTCTTaGGTTGAAATCAAAGAATTC +
Preference number: 5 (lower is better)
Translates to: VCLAQSLPEIPYVHCPRLTGGSS*VEIKEF
Trigger: GAATTCTTTGATTTCAACCAAAGAAGAGCCTCCAGT...GAGCCTCGGGCAGTGGACATAGGGAATCTCTGGCAAGCTCTGAGCTAGACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGCAGTCTCCTTGGGGCTaGTGGCCGTCCTGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKQSPWG*WPSCEA
Trigger: TGCCTCACAGGACGGCCACAAGCCCCAAGGAGACTG...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCAGTAGCTTTACAGTaGCAACGGGGTATTTCAGAT +
Preference number: 5 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFSVALQ*QRGISD
Trigger: ATCTGAAATACCCCGTTGCAACTGTAAAGCTACTGA...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGTTCAACCTCTGGATATaGGCGCTTGGAAAAGCACTG +
Preference number: 5 (lower is better)
Translates to: MWKSWGKETQVCLSPWLGFNLWI*ALGKAL
Trigger: CAGTGCTTTTCCAAGCGCCAATATCCAGAGGTTGAA...CCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTAGTGATATCATGTTCTaGAGCATAGCGAATTCGAGC +
Preference number: 5 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFSDIMF*SIANSS
Trigger: GCTCGAATTCGCTATGCTCAAGAACATGATATCACT...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTTTCCGTGGCAATGGGTaGATTCTTTGGCCTTACACC +
Preference number: 5 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVFRGNG*ILWPYT
Trigger: GGTGTAAGGCCAAAGAATCAACCCATTGCCACGGAA...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TGTCCTGTGAGACATCTAGACTGCTGTCAAGTTGATTACCTACCAAAGCCTACTTGGATTTATCCAGCCTaGGGTCAGCCGTCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: CPVRHLDCCQVDYLPKPTWIYPA*GQPSPE
Trigger: CTCTGGGGACGGCTGACCCAAGGCTGGATAAATCCA...AGTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCTAGATGTCTCACAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTTCTGAAGTCTGGGGTTaGGGACTGCTAGTAATGAGC +
Preference number: 5 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGSEVWG*GLLVMS
Trigger: GCTCATTACTAGCAGTCCCAAACCCCAGACTTCAGA...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTAAAGAGGCATGGGGTTaGTCAGTAGGCCTGTCTGAA +
Preference number: 5 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGKEAWG*SVGLSE
Trigger: TTCAGACAGGCCTACTGACAAACCCCATGCCTCTTT...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGCTGAGGCCTGAGTTGTaGGCTCATATAAAAAGGCCT +
Preference number: 5 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWLRPEL*AHIKRP
Trigger: AGGCCTTTTTATATGAGCCAACAACTCAGGCCTCAG...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTGTATTTTGCTCTGGTTaGGGGTCTTGCCCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVVFCSG*GSCPLP
Trigger: TGGAAGAGGGCAAGACCCCAAACCAGAGCAAAATAC...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAGTATTTTGCTCTGGTTaGGGGTCTTGCCCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSVFCSG*GSCPLP
Trigger: TGGAAGAGGGCAAGACCCCAAACCAGAGCAAAATAC...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGGTATTTTGCTCTGGTTaGGGGTCTTGCCCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWVFCSG*GSCPLP
Trigger: TGGAAGAGGGCAAGACCCCAAACCAGAGCAAAATAC...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGGTTCCCTCCGTGGAATaGATGGGAGTAACCTCAATA +
Preference number: 5 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWVPSVE*MGVTSI
Trigger: TATTGAGGTTACTCCCATCAATTCCACGGAGGGAAC...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GCTGTTTTCCCAGGCAGGTCTGGAACGAAGCCTCCAATGAATGGCGGAGAATGGTCAATGACAGCTATTTaGCTATTAGACTGGGTTGGC +
Preference number: 5 (lower is better)
Translates to: AVFPGRSGTKPPMNGGEWSMTAI*LLDWVG
Trigger: GCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGA...CCATTCTCCGCCATTCATTGGAGGCTTCGTTCCAGACCTGCCTGGGAAAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATCAATGCTAAAGATTaGGTTCAGAAGAGGGTCAAC +
Preference number: 5 (lower is better)
Translates to: KLGERDPSLSVSLVGAHWINAKD*VQKRVN
Trigger: GTTGACCCTCTTCTGAACCAAATCTTTAGCATTGAT...CCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTCCAGTCCCTCAACCCTaGGCAGTGCTTATTTATACC +
Preference number: 5 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGPVPQP*AVLIYT
Trigger: GGTATAAATAAGCACTGCCAAGGGTTGAGGGACTGG...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTCTCAGAAAAATTGGATaGACCATTACCGAAAGGGCT +
Preference number: 5 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFLRKIG*TITERA
Trigger: AGCCCTTTCGGTAATGGTCAATCCAATTTTTCTGAG...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000439151.7
CDS TCA 90 bp ATCAACCGACCTTTAGATGCAGAAACATTGGCTGGATTAGCAGCATaGCAGGTTATACAGATGTGGAGGGAGCACCGGAAGCCCTTGTTC +
Preference number: 5 (lower is better)
Translates to: INRPLDAETLAGLAA*QVIQMWREHRKPLF
Trigger: GAACAAGGGCTTCCGGTGCTCCCTCCACATCTGTATAACCTGTCATGCTGCTAATCCAGCCAATGTTTCTGCATCTAAAGGTCGGTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS GCA 90 bp CTAAGCAGTCAGCATGATTTTGCTCTGTCAGTGGTTCCTCAAGTATaGTTGCTGAAGGAGTTCTATGCTCTGGAAACTCATCCCGCCCCT +
Preference number: 5 (lower is better)
Translates to: LSSQHDFALSVVPQV*LLKEFYALETHPAP
Trigger: AGGGGCGGGATGAGTTTCCAGAGCATAGAACTCCTTCAGCAAGCATACTTGAGGAACCACTGACAGAGCAAAATCATGCTGACTGCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 90 bp CATCTAAATTCACTGGATTGGAAAAGGGCAGCAGACAATTTCTTCTaGGTAGTTCACAGGTCTGATCCATCCTGGGCCGGCATCAACCTG +
Preference number: 5 (lower is better)
Translates to: HLNSLDWKRAADNFF*VVHRSDPSWAGINL
Trigger: CAGGTTGATGCCGGCCCAGGATGGATCAGACCTGTGAACTACCCAGAAGAAATTGTCTGCTGCCCTTTTCCAATCCAGTGAATTTAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000510954.5
ENST00000511258.5
ENST00000512992.1
CDS CCA 90 bp CATCTAAATTCACTGGATTGGAAAAGGGCAGCAGACAATTTCTTCTaGGTAGTTCACAGGTCTGATCCATCCTGGGCCGGCATCAACCGT +
Preference number: 5 (lower is better)
Translates to: HLNSLDWKRAADNFF*VVHRSDPSWAGINR
Trigger: ACGGTTGATGCCGGCCCAGGATGGATCAGACCTGTGAACTACCCAGAAGAAATTGTCTGCTGCCCTTTTCCAATCCAGTGAATTTAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439151.7
ENST00000602285.1
CDS-3UTR CAA 90 bp GACCCCTTGGGAACATCATACTGTTCTGCAAGTCCAACACTGGCTTCCCATTTACACCATGGGCGTCTCTaGAATTTTGCCCAGATGAGA +
Preference number: 5 (lower is better)
Translates to: DPLGTSYCSASPTLASHLHHGRL*NFAQMR
Trigger: TCTCATCTGGGCAAAATTCAAGAGACGCCCATGGTG...TAAATGGGAAGCCAGTGTTGGACTTGCAGAACAGTATGATGTTCCCAAGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR CAA 90 bp CCTGGTCAAAGGTTCCTGAAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTTCTTCACTGTCCAACTaGATTGAACCAGGAATACAT +
Preference number: 5 (lower is better)
Translates to: PGQRFLKALESRLTGMRPSSLSN*IEPGIH
Trigger: ATGTATTCCTGGTTCAATCAAGTTGGACAGTGAAGA...AGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTTCAGGAACCTTTGACCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGCTGACTCAGGATCATTaGTGCAGTCTTCAAATGGCA +
Preference number: 5 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGLTQDH*CSLQMA
Trigger: TGCCATTTGAAGACTGCACAAATGATCCTGAGTCAG...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGCTGACTCAGGATCATTaGTGCAGTCTTCAAATGGCA +
Preference number: 5 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWLTQDH*CSLQMA
Trigger: TGCCATTTGAAGACTGCACAAATGATCCTGAGTCAG...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TTGAGATCAAAGCACCCTCAGGCAAGCCCAATAAAGAGTCACCATTTGAAGTCTCTTCCTGGGGCAGTGTaGGACCCTGTGAGGCTATTT +
Preference number: 5 (lower is better)
Translates to: LRSKHPQASPIKSHHLKSLPGAV*DPVRLF
Trigger: AAATAGCCTCACAGGGTCCAACACTGCCCCAGGAAG...AGACTTCAAATGGTGACTCTTTATTGGGCTTGCCTGAGGGTGCTTTGATCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638627.2
CDS-3UTR CAA 90 bp CACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTGCCACAAAGGTAATAGAGCTTGATTaGCTGCCCCACCCTTTATTA +
Preference number: 5 (lower is better)
Translates to: HTAAKRHFLNTTTSGATKVIELD*LPHPLL
Trigger: TAATAAAGGGTGGGGCAGCAAATCAAGCTCTATTAC...CTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTCTGTTTCTATGTCACTaGAATCCCTGGTTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFLFLCH*NPWFSH
Trigger: ATGAGAAAACCAGGGATTCAAGTGACATAGAAACAG...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGTTTGATCGTCCACAGTaGCGCCTAGTAACACAGTCT +
Preference number: 5 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLFDRPQ*RLVTQS
Trigger: AGACTGTGTTACTAGGCGCAACTGTGGACGATCAAA...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACGTTCCTCAAGTATGCTaGCTGAAGGAGTTCTATGCT +
Preference number: 5 (lower is better)
Translates to: KALESRLTGMRPVSLISDVPQVC*LKEFYA
Trigger: AGCATAGAACTCCTTCAGCAAGCATACTTGAGGAAC...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTGTCGTTTTCGCTTCCTaGGCTTGTCAAATATCTTGG +
Preference number: 5 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGVVFAS*ACQISW
Trigger: CCAAGATATTTGACAAGCCAAGGAAGCGAAAACGAC...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTAGCCTGGAATCTCTTTaGACGAGTCATCATTTTTCA +
Preference number: 5 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFSLESL*TSHHFS
Trigger: TGAAAAATGATGACTCGTCAAAAGAGATTCCAGGCT...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGTCCTCAACAGTCTCCTaGGGGCTTGTGGCCGTCCTG +
Preference number: 5 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKSSTVS*GLVAVL
Trigger: CAGGACGGCCACAAGCCCCAAGGAGACTGTTGAGGA...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGCTCATCTTATCAATGTaGGAAGGAACAGCTCGAGGA +
Preference number: 5 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGLILSM*EGTARG
Trigger: TCCTCGAGCTGTTCCTTCCAACATTGATAAGATGAG...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGCTCATCTTATCAATGTaGGAAGGAACAGCTCGAGGA +
Preference number: 5 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWLILSM*EGTARG
Trigger: TCCTCGAGCTGTTCCTTCCAACATTGATAAGATGAG...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGCAATGGGTTGATTCTTaGGCCTTACACCCAAGAAGC +
Preference number: 5 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWQWVDS*ALHPRS
Trigger: GCTTCTTGGGTGTAAGGCCAAAGAATCAACCCATTG...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TGTCCTGTGAGACATCTAGACTGCTGTCAAGTTGATTACCTACCAAAGCCTACTGAGCAGCCATTCCTGTaGATTGCTCTGCCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: CPVRHLDCCQVDYLPKPTEQPFL*IALPGE
Trigger: CTCACCTGGCAGAGCAATCAACAGGAATGGCTGCTC...AGTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCTAGATGTCTCACAGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TGTCCTGTGAGACATCTAGACTGCTGTCAAGTTGATTACCTACCAAAGCCTACTCCTGCCAGAGCTTTTTaGGAGAGCGACAGCATCTGG +
Preference number: 5 (lower is better)
Translates to: CPVRHLDCCQVDYLPKPTPARAF*ESDSIW
Trigger: CCAGATGCTGTCGCTCTCCAAAAAAGCTCTGGCAGG...AGTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCTAGATGTCTCACAGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGAACCAAGGATTGGGATTaGGTCCCTGACCCAGCGAGG +
Preference number: 5 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRTKDWD*VPDPAR
Trigger: CCTCGCTGGGTCAGGGACCAAATCCCAATCCTTGGT...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCACTGAGGCCTGAGTTGTaGGCTCATATAAAAAGGCCT +
Preference number: 5 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSLRPEL*AHIKRP
Trigger: AGGCCTTTTTATATGAGCCAACAACTCAGGCCTCAG...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCTTCCTGAGGCCTGAGTaGTTGGCTCATATAAAAAGG +
Preference number: 5 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFFLRPE*LAHIKR
Trigger: CCTTTTTATATGAGCCAACAACTCAGGCCTCAGGAA...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTCAGGGCCCAGGGACTTaGCTCTGTGGTTACCAACTT +
Preference number: 5 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPQGPGT*LCGYQL
Trigger: AAGTTGGTAACCACAGAGCAAAGTCCCTGGGCCCTG...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTAGCTGGAAGTGTATTTaGCTCTGGTTTGGGGTCTTG +
Preference number: 5 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGSWKCI*LWFGVL
Trigger: CAAGACCCCAAACCAGAGCAAAATACACTTCCAGCT...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAAGCTGGAAGTGTATTTaGCTCTGGTTTGGGGTCTTG +
Preference number: 5 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSSWKCI*LWFGVL
Trigger: CAAGACCCCAAACCAGAGCAAAATACACTTCCAGCT...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AGATGTATTGGCTTTCTAGCTACCCATGGAGAATTTCAACTTTTGCCTTGTCCCAGGAACCCGGGTTTCTaGAGCTGCCAGTCCCTCAAC +
Preference number: 5 (lower is better)
Translates to: RCIGFLATHGEFQLLPCPRNPGF*SCQSLN
Trigger: GTTGAGGGACTGGCAGCTCAAGAAACCCGGGTTCCT...GGGACAAGGCAAAAGTTGAAATTCTCCATGGGTAGCTAGAAAGCCAATACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGCGTCAGCTTGCCTCTTaGCCAAGACCTAGGAGGCGG +
Preference number: 5 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKRQLAS*PRPRRR
Trigger: CCGCCTCCTAGGTCTTGGCAAAGAGGCAAGCTGACG...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TGTCCTGTGAGACATCTAGACTGCTGTCAAGTTGATTACCTACCAAAGCCTACTCTCTGGTGTGCTGTCTaGTTCACTTCCCATGGCCAC +
Preference number: 5 (lower is better)
Translates to: CPVRHLDCCQVDYLPKPTLWCAV*FTSHGH
Trigger: GTGGCCATGGGAAGTGAACAAGACAGCACACCAGAG...AGTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCTAGATGTCTCACAGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439151.7
CDS-3UTR CAA 90 bp CTCAGAAGGATCTCCAAAAGCCTCCACGTAGTACTGCCGATAGGGCCTCCGGTTAGACTTTTTCTTAGGTaGACACCAAGAAGTTGTCGA +
Preference number: 5 (lower is better)
Translates to: LRRISKSLHVVLPIGPPVRLFLR*TPRSCR
Trigger: TCGACAACTTCTTGGTGTCAACCTAAGAAAAAGTCT...AACCGGAGGCCCTATCGGCAGTACTACGTGGAGGCTTTTGGAGATCCTTCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638627.2
CDS TCA 90 bp TCTCGGTCTCCCTGCAGTACAGCATCAAGAGTCACACTTGGAAGCTaGTTCAGTTTTCTTTTGCGCTCGGTCTTTAAGGCTTTACGGTTC +
Preference number: 5 (lower is better)
Translates to: SRSPCSTASRVTLGS*FSFLLRSVFKALRF
Trigger: GAACCGTAAAGCCTTAAAGACCGAGCGCAAAAGAAAACTGAATCAGCTTCCAAGTGTGACTCTTGATGCTGTACTGCAGGGAGACCGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS TCA 90 bp GGTAAAGTGATTAGGGCAGATGATACTATTAGATGCAAGGATCTTTaGCCCAGCAGCCAGGCAAAAGTCATTGGCGTGGTATGCCACAGG +
Preference number: 5 (lower is better)
Translates to: GKVIRADDTIRCKDL*PSSQAKVIGVVCHR
Trigger: CCTGTGGCATACCACGCCAATGACTTTTGCCTGGCTGCTGGGTCAAAGATCCTTGCATCTAATAGTATCATCTGCCCTAATCACTTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS GCA 90 bp GAGTTCAGGGGAGTTATTACAAGAGGGTTCCTGTTTCATAGCAAGTaGTGTAGGACCACCAGGACTCAAGGAAGTGCAAACAATTGGCGT +
Preference number: 5 (lower is better)
Translates to: EFRGVITRGFLFHSK*CRTTRTQGSANNWR
Trigger: ACGCCAATTGTTTGCACTTCCTTGAGTCCTGGTGGTCCTACAGCACTTGCTATGAAACAGGAACCCTCTTGTAATAACTCCCCTGAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439151.7
ENST00000602285.1
CDS CCA 90 bp CGAAAGGGCTGTCCTTGTCTTCAGGGGCATCTAAATTCACTGGATTaGAAAAGGGCAGCAGACAATTTCTTCTGGGTAGTTCACAGGTCT +
Preference number: 5 (lower is better)
Translates to: RKGCPCLQGHLNSLD*KRAADNFFWVVHRS
Trigger: AGACCTGTGAACTACCCAGAAGAAATTGTCTGCTGCCCTTTTCCAATCCAGTGAATTTAGATGCCCCTGAAGACAAGGACAGCCCTTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
ENST00000508896.5
ENST00000510954.5
ENST00000511258.5
ENST00000512992.1
ENST00000602285.1
CDS CCA 90 bp GGTATGGATTCCTGTGCGACATTCATTGCAGATAAATTTTCCTCTTaGCATCTCAGTCAATCCAAGGCACTCCAGGTGGAAAGCCCCACA +
Preference number: 5 (lower is better)
Translates to: GMDSCATFIADKFSS*HLSQSKALQVESPT
Trigger: TGTGGGGCTTTCCACCTGGAGTGCCTTGGATTGACTGAGATGCCAAGAGGAAAATTTATCTGCAATGAATGTCGCACAGGAATCCATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 90 bp ACATCATGTCTCATCTTATCAATGTTGGAAGGAACAGCTCGAGGATaGCAGATCTCAGCTGGCCACCACCTGTATCGTCCAACTTTTACC +
Preference number: 5 (lower is better)
Translates to: TSCLILSMLEGTARG*QISAGHHLYRPTFT
Trigger: GGTAAAAGTTGGACGATACAGGTGGTGGCCAGCTGAGATCTGCCATCCTCGAGCTGTTCCTTCCAACATTGATAAGATGAGACATGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
ENST00000503056.5
ENST00000504457.5
ENST00000505395.5
ENST00000508029.5
ENST00000515735.1
CDS CCA 90 bp CATCTAAATTCACTGGATTGGAAAAGGGCAGCAGACAATTTCTTCTaGGTAGTTCACAGGTCTGATCCATCCTGGGCCGGCATCAACTCT +
Preference number: 5 (lower is better)
Translates to: HLNSLDWKRAADNFF*VVHRSDPSWAGINS
Trigger: AGAGTTGATGCCGGCCCAGGATGGATCAGACCTGTGAACTACCCAGAAGAAATTGTCTGCTGCCCTTTTCCAATCCAGTGAATTTAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508896.5
CDS-3UTR CAA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCTCTAAATTCACTGGATaGGAAAAGGGCAGCAGACAA +
Preference number: 5 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFSKFTG*EKGSRQ
Trigger: TTGTCTGCTGCCCTTTTCCAATCCAGTGAATTTAGA...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GATATAGGATCTCTTCCACCTCTGGATTGCACTGGGCCACTCCAGGGTTGGGTGAGACTTTTTCTTAGGTaGACAAAATGGCAATTCCTG +
Preference number: 5 (lower is better)
Translates to: DIGSLPPLDCTGPLQGWVRLFLR*TKWQFL
Trigger: CAGGAATTGCCATTTTGTCAACCTAAGAAAAAGTCT...CACCCAACCCTGGAGTGGCCCAGTGCAATCCAGAGGTGGAAGAGATCCTATATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTACATTTTCGGTTCTTaGACCCCTTGGGAACATCAT +
Preference number: 5 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGYIFGS*TPWEHH
Trigger: ATGATGTTCCCAAGGGGTCAAAGAACCGAAAATGTA...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGTACATTTTCGGTTCTTaGACCCCTTGGGAACATCAT +
Preference number: 5 (lower is better)
Translates to: PCGKVGGKRPKSVCLLGWYIFGS*TPWEHH
Trigger: ATGATGTTCCCAAGGGGTCAAAGAACCGAAAATGTA...CCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGCTGACTCAGGATCATTaGTGCAGTCTTCAAATGGCA +
Preference number: 5 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWLTQDH*CSLQMA
Trigger: TGCCATTTGAAGACTGCACAAATGATCCTGAGTCAG...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCTGGTCAAAGGTTCCTGAAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTTTTATGTGCTTCAAATaGTATGTGGCCCTTTTTCAC +
Preference number: 5 (lower is better)
Translates to: PGQRFLKALESRLTGMRPFMCFK*YVALFH
Trigger: GTGAAAAAGGGCCACATACAATTTGAAGCACATAAA...AGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTTCAGGAACCTTTGACCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGACTTCCTGGGGCAGTGTaGGACCCTGTGAGGCTATTT +
Preference number: 5 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRLPGAV*DPVRLF
Trigger: AAATAGCCTCACAGGGTCCAACACTGCCCCAGGAAG...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGATGCTTGATGACAGGTaGAATTTTGGAGAGAGAGCA +
Preference number: 5 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGMLDDR*NFGERA
Trigger: TGCTCTCTCTCCAAAATTCAACCTGTCATCAAGCAT...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCGTAATAGAGCTTGATTaGCTGCCCCACCCTTTATTA +
Preference number: 5 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFVIELD*LPHPLL
Trigger: TAATAAAGGGTGGGGCAGCAAATCAAGCTCTATTAC...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTGCCACAAAGCTGTTTCTATGTCACTaGAATCCCTGGTTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: HTAAKRHFLNTTTSGATKLFLCH*NPWFSH
Trigger: ATGAGAAAACCAGGGATTCAAGTGACATAGAAACAG...CTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGTCACCATCTTCACTaGTTAAGTGGCCCATTATCT +
Preference number: 5 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLGHHLH*LSGPLS
Trigger: AGATAATGGGCCACTTAACAAGTGAAGATGGTGACC...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAGTTCCTCAAGTATGCTaGCTGAAGGAGTTCTATGCT +
Preference number: 5 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSVPQVC*LKEFYA
Trigger: AGCATAGAACTCCTTCAGCAAGCATACTTGAGGAAC...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCCAGGGTCTAAATCATaGGATTCAAGAAGTTTCTTA +
Preference number: 5 (lower is better)
Translates to: GGKRPKSVCLLGWGPLDFPGSKS*DSRSFL
Trigger: TAAGAAACTTCTTGAATCCAATGATTTAGACCCTGG...AAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TCCCCCTTCTTGGGCATAAATCCAGGGTCTAAATCATTGGATTCAAGAAGTTTCCCAAGGTCCCCCTTCTaGGGCATAAATCCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: SPFLGINPGSKSLDSRSFPRSPF*GINPGS
Trigger: AGACCCTGGATTTATGCCCAAGAAGGGGGACCTTGG...GAAACTTCTTGAATCCAATGATTTAGACCCTGGATTTATGCCCAAGAAGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375350.3
CDS-3UTR CAA 90 bp CACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTGCCACAAAGCTCCACCAAAATCTTTaGAATAAGATGTGGCACAAG +
Preference number: 5 (lower is better)
Translates to: HTAAKRHFLNTTTSGATKLHQNL*NKMWHK
Trigger: CTTGTGCCACATCTTATTCAAAAGATTTTGGTGGAG...CTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTGGCTTGTCAAATATCTaGGTAGTGCCTCCACCAAAA +
Preference number: 5 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGGLSNI*VVPPPK
Trigger: TTTTGGTGGAGGCACTACCAAGATATTTGACAAGCC...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTTTCGCTTCCTTGGCTaGTCAAATATCTTGGTAGTG +
Preference number: 5 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGFRFLG*SNILVV
Trigger: CACTACCAAGATATTTGACAAGCCAAGGAAGCGAAA...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGCCTGCTTTACAGTCATaGCAATACCAGTTTCCTTCA +
Preference number: 5 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWPALQS*QYQFPS
Trigger: TGAAGGAAACTGGTATTGCAATGACTGTAAAGCAGG...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTCCTGCTTTACAGTCATaGCAATACCAGTTTCCTTCA +
Preference number: 5 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGPALQS*QYQFPS
Trigger: TGAAGGAAACTGGTATTGCAATGACTGTAAAGCAGG...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCATTAATTCCTCAAACCTaGCTGCAGCTTCCTGAAGAG +
Preference number: 5 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSLIPQT*LQLPEE
Trigger: CTCTTCAGGAAGCTGCAGCAAGGTTTGAGGAATTAA...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGTCAGTAGCTTTACAGTaGCAACGGGGTATTTCAGAT +
Preference number: 5 (lower is better)
Translates to: PCGKVGGKRPKSVCLLGWSVALQ*QRGISD
Trigger: ATCTGAAATACCCCGTTGCAACTGTAAAGCTACTGA...CCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGAGTGATATCATGTTCTaGAGCATAGCGAATTCGAGC +
Preference number: 5 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWSDIMF*SIANSS
Trigger: GCTCGAATTCGCTATGCTCAAGAACATGATATCACT...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTTTCCCTGCTGGTCGCTaGGTCAGATTGAGACAGTCT +
Preference number: 5 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPFPAGR*VRLRQS
Trigger: AGACTGTCTCAATCTGACCAAGCGACCAGCAGGGAA...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGAGTCACTGGAGAGGGTTaGTCGCTTAGCTGGGGTCTT +
Preference number: 5 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRVTGEG*SLSWGL
Trigger: AAGACCCCAGCTAAGCGACAAACCCTCTCCAGTGAC...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTAACCTCAATAAGAACTaGAGGAAATTGGGACCAAAT +
Preference number: 5 (lower is better)
Translates to: WGKETQVCLSPWLGPTGFNLNKN*RKLGPN
Trigger: ATTTGGTCCCAATTTCCTCAAGTTCTTATTGAGGTT...AAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACCCAATTCACATCCCTTaGGAAAAGGGGTCTTATTAC +
Preference number: 5 (lower is better)
Translates to: KALESRLTGMRPVSLISDPIHIP*EKGSYY
Trigger: GTAATAAGACCCCTTTTCCAAAGGGATGTGAATTGG...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGCCAAGGCAAACACTCTaGAGATCTCAATTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLPRQTL*RSQFPS
Trigger: GCTTGGAAATTGAGATCTCAAGAGTGTTTGCCTTGG...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CAGGAAATCGCCACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGATGTCTATCGTCAGCTaGCCTCTTTGCCAAGACCTA +
Preference number: 5 (lower is better)
Translates to: QEIATDLKEHHFLPRVPRMSIVS*PLCQDL
Trigger: TAGGTCTTGGCAAAGAGGCAAGCTGACGATAGACAT...CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACTTGTCCATAAGCATTTaGGGATGTTCCACTGACAGT +
Preference number: 5 (lower is better)
Translates to: KALESRLTGMRPVSLISDLSISI*GCSTDS
Trigger: ACTGTCAGTGGAACATCCCAAAATGCTTATGGACAA...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439151.7
CDS-3UTR CAA 90 bp CACACCGCAGCCAAGAGACACTTCCTCAACACAACCACTTCTGGTGCCACAAAGACAAGATGGAGAATCTaGTCCATAAGCATTTTGGGA +
Preference number: 5 (lower is better)
Translates to: HTAAKRHFLNTTTSGATKTRWRI*SISILG
Trigger: TCCCAAAATGCTTATGGACAAGATTCTCCATCTTGT...CTTTGTGGCACCAGAAGTGGTTGTGTTGAGGAAGTGTCTCTTGGCTGCGGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439151.7
CDS TCA 90 bp TCTTCTTTGGTTGAAATCAAAGAATTCTCGTCCACCTGCTTGTTCTaGGCACTAGATCGACCTCGGGCTAGAAGGCTTTCCTCTTCACAG +
Preference number: 5 (lower is better)
Translates to: SSLVEIKEFSSTCLF*ALDRPRARRLSSSQ
Trigger: CTGTGAAGAGGAAAGCCTTCTAGCCCGAGGTCGATCTAGTGCTCAGAACAAGCAGGTGGACGAGAATTCTTTGATTTCAACCAAAGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS TCA 90 bp TTTTCTGTGTTTCAGTCTGAGGAGCTAATGGCAAGAATGGCGATTTaGCTGCACCGTGTCTACTCTCTGGTGTGCTGTCTTGTTCACTTC +
Preference number: 5 (lower is better)
Translates to: FSVFQSEELMARMAI*LHRVYSLVCCLVHF
Trigger: GAAGTGAACAAGACAGCACACCAGAGAGTAGACACGGTGCAGTCAAATCGCCATTCTTGCCATTAGCTCCTCAGACTGAAACACAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439151.7
ENST00000602285.1
CDS CCA 90 bp AACTGGGAATTCCTGGCTCCTTTTCCATGTCACCAATGCTGGCACTaGATTTATCACAAACATTTAACCGTGGCCCAGCTGAATCTAAGC +
Preference number: 5 (lower is better)
Translates to: NWEFLAPFPCHQCWH*IYHKHLTVAQLNLS
Trigger: GCTTAGATTCAGCTGGGCCACGGTTAAATGTTTGTGATAAATCCAGTGCCAGCATTGGTGACATGGAAAAGGAGCCAGGAATTCCCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 90 bp GTGTCAAACTGGGAATTCCTGGCTCCTTTTCCATGTCACCAATGCTaGCACTGGATTTATCACAAACATTTAACCGTGGCCCAGCTGAAT +
Preference number: 5 (lower is better)
Translates to: VSNWEFLAPFPCHQC*HWIYHKHLTVAQLN
Trigger: ATTCAGCTGGGCCACGGTTAAATGTTTGTGATAAATCCAGTGCCAGCATTGGTGACATGGAAAAGGAGCCAGGAATTCCCAGTTTGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GCCCAGATGAGATCTCCAACTTCATACTTCAGTGGCGTAGACTTTTTCTTAGGTCACCATGGGCGTCTCTaGAATTTTGCCCAGATGAGA +
Preference number: 5 (lower is better)
Translates to: AQMRSPTSYFSGVDFFLGHHGRL*NFAQMR
Trigger: TCTCATCTGGGCAAAATTCAAGAGACGCCCATGGTG...ACCTAAGAAAAAGTCTACGCCACTGAAGTATGAAGTTGGAGATCTCATCTGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR CAA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTTACATTTTCGGTTCTTaGACCCCTTGGGAACATCAT +
Preference number: 5 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGYIFGS*TPWEHH
Trigger: ATGATGTTCCCAAGGGGTCAAAGAACCGAAAATGTA...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGTCTTCACTGTCCAACTaGATTGAACCAGGAATACAT +
Preference number: 5 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGSSLSN*IEPGIH
Trigger: ATGTATTCCTGGTTCAATCAAGTTGGACAGTGAAGA...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGATGCTTGATGACAGGTaGAATTTTGGAGAGAGAGCA +
Preference number: 5 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLMLDDR*NFGERA
Trigger: TGCTCTCTCTCCAAAATTCAACCTGTCATCAAGCAT...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAGTAATAGAGCTTGATTaGCTGCCCCACCCTTTATTA +
Preference number: 5 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSVIELD*LPHPLL
Trigger: TAATAAAGGGTGGGGCAGCAAATCAAGCTCTATTAC...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTCGGAACTTGGGCTGTTaGCTTTTCGAATGTAATAGA +
Preference number: 5 (lower is better)
Translates to: DHVEKLGERDPSLSVSLVRNLGC*LFECNR
Trigger: TCTATTACATTCGAAAAGCAAACAGCCCAAGTTCCG...AACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCGGAACTTGGGCTGTTaGCTTTTCGAATGTAATAGA +
Preference number: 5 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVRNLGC*LFECNR
Trigger: TCTATTACATTCGAAAAGCAAACAGCCCAAGTTCCG...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTTATACTTCGGAACTaGGGCTGTTTGCTTTTCGAA +
Preference number: 5 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWFILRN*GCLLFE
Trigger: TTCGAAAAGCAAACAGCCCAAGTTCCGAAGTATAAA...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACTTTATACTTCGGAACTaGGGCTGTTTGCTTTTCGAA +
Preference number: 5 (lower is better)
Translates to: KALESRLTGMRPVSLISDFILRN*GCLLFE
Trigger: TTCGAAAAGCAAACAGCCCAAGTTCCGAAGTATAAA...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAGATTGCTTAACCTaGCTATCGAAATGCACATCA +
Preference number: 5 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGSDCLT*LSKCTS
Trigger: TGATGTGCATTTCGATAGCAAGGTTAAGCAATCTGA...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACTCAGATTGCTTAACCTaGCTATCGAAATGCACATCA +
Preference number: 5 (lower is better)
Translates to: KALESRLTGMRPVSLISDSDCLT*LSKCTS
Trigger: TGATGTGCATTTCGATAGCAAGGTTAAGCAATCTGA...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGTTTACCAGGATCAGATaGCTTAACCTTGCTATCGAA +
Preference number: 5 (lower is better)
Translates to: PCGKVGGKRPKSVCLLGWFTRIR*LNLAIE
Trigger: TTCGATAGCAAGGTTAAGCAATCTGATCCTGGTAAA...CCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGCCAAGGTCCCCCTTCTaGGGCATAAATCCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKPRSPF*GINPGS
Trigger: AGACCCTGGATTTATGCCCAAGAAGGGGGACCTTGG...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTGCCCTCAATGGGTCGTTTTCGCTTCCTaGGCTTGTCAAATATCTTGG +
Preference number: 5 (lower is better)
Translates to: TDLKEHHFLPRVPRCPQWVVFAS*ACQISW
Trigger: CCAAGATATTTGACAAGCCAAGGAAGCGAAAACGAC...CCATTGAGGGCACCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AGACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGCCTGTGCGACATTCATaGCAGATAAATTTTCCTCTT +
Preference number: 5 (lower is better)
Translates to: RPKSVCLLGWGPLDFHTWPVRHS*QINFPL
Trigger: AAGAGGAAAATTTATCTGCAATGAATGTCGCACAGG...CCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTCCTGTGCGACATTCATaGCAGATAAATTTTCCTCTT +
Preference number: 5 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGPVRHS*QINFPL
Trigger: AAGAGGAAAATTTATCTGCAATGAATGTCGCACAGG...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGTCAGTAGCTTTACAGTaGCAACGGGGTATTTCAGAT +
Preference number: 5 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLSVALQ*QRGISD
Trigger: ATCTGAAATACCCCGTTGCAACTGTAAAGCTACTGA...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGAATATGCCCCAGACCTTaGCTGGCAGGCCATGAACTT +
Preference number: 5 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRICPRP*LAGHEL
Trigger: AAGTTCATGGCCTGCCAGCAAAGGTCTGGGGCATAT...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGATATGCCCCAGACCTTaGCTGGCAGGCCATGAACTT +
Preference number: 5 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVICPRP*LAGHEL
Trigger: AAGTTCATGGCCTGCCAGCAAAGGTCTGGGGCATAT...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CAGGAAATCGCCACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTTCCTGAGGCCTGAGTaGTTGGCTCATATAAAAAGG +
Preference number: 5 (lower is better)
Translates to: QEIATDLKEHHFLPRVPRFLRPE*LAHIKR
Trigger: CCTTTTTATATGAGCCAACAACTCAGGCCTCAGGAA...CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGCTCCAAGGACTGATCTaGAGACTCTGCACAGCCCAG +
Preference number: 5 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKLQGLI*RLCTAQ
Trigger: CTGGGCTGTGCAGAGTCTCAAGATCAGTCCTTGGAG...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGTCTAAACACCACCTCTaGCCAGTCTTCAGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVSKHHL*PVFREG
Trigger: CCCTTCCCTGAAGACTGGCAAGAGGTGGTGTTTAGA...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGCCAATTCACATCCCTTaGGAAAAGGGGTCTTATTAC +
Preference number: 5 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLPIHIP*EKGSYY
Trigger: GTAATAAGACCCCTTTTCCAAAGGGATGTGAATTGG...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TGTCCTGTGAGACATCTAGACTGCTGTCAAGTTGATTACCTACCAAAGCCTACTCCAGTCCCTCAACCCTaGGCAGTGCTTATTTATACC +
Preference number: 5 (lower is better)
Translates to: CPVRHLDCCQVDYLPKPTPVPQP*AVLIYT
Trigger: GGTATAAATAAGCACTGCCAAGGGTTGAGGGACTGG...AGTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCTAGATGTCTCACAGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTGCCCTCAATGGAGGAAGTGCAAACAATaGGCGTCTGAGCTCTTGAAT +
Preference number: 5 (lower is better)
Translates to: TDLKEHHFLPRVPRCPQWRKCKQ*ASELLN
Trigger: ATTCAAGAGCTCAGACGCCAATTGTTTGCACTTCCT...CCATTGAGGGCACCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439151.7
CDS TCA 90 bp CAAAAACGGAGCCTCCCTTTCAAGAACTGGAGGCTCTTCTTTGGTTaGAATCAAAGAATTCTCGTCCACCTGCTTGTTCTGAGCACTAGA +
Preference number: 5 (lower is better)
Translates to: QKRSLPFKNWRLFFG*NQRILVHLLVLSTR
Trigger: TCTAGTGCTCAGAACAAGCAGGTGGACGAGAATTCTTTGATTTCAACCAAAGAAGAGCCTCCAGTTCTTGAAAGGGAGGCTCCGTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS TCA 90 bp TGGTCTGAGTTTCCTCAAAGATCTCCTCTATACTCTCATCCTCTGTaGCTGGCTGTTCTGGGTCCATTTCAGAATCTACATCTGCATCGT +
Preference number: 5 (lower is better)
Translates to: WSEFPQRSPLYSHPL*LAVLGPFQNLHLHR
Trigger: ACGATGCAGATGTAGATTCTGAAATGGACCCAGAACAGCCAGTCACAGAGGATGAGAGTATAGAGGAGATCTTTGAGGAAACTCAGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439151.7
ENST00000602285.1
CDS CCA 90 bp CCACAACTAAAACACTCATCTTCTCGCTCCTTTGTGATTTCACCCTaGGTCCTGCGCTTTCCCTGTTGCTTCTTCTTGAATTTCTTTGAC +
Preference number: 5 (lower is better)
Translates to: PQLKHSSSRSFVISP*VLRFPCCFFLNFFD
Trigger: GTCAAAGAAATTCAAGAAGAAGCAACAGGGAAAGCGCAGGACCCAGGGTGAAATCACAAAGGAGCGAGAAGATGAGTGTTTTAGTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
ENST00000513736.1
CDS-3UTR CAA 90 bp CAGGAAATCGCCACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTCTAAATTCACTGGATaGGAAAAGGGCAGCAGACAA +
Preference number: 5 (lower is better)
Translates to: QEIATDLKEHHFLPRVPRSKFTG*EKGSRQ
Trigger: TTGTCTGCTGCCCTTTTCCAATCCAGTGAATTTAGA...CCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AAACATGACGATTGCTTTTCCAGCCACCCAGGCTCTCTCAGAAGGATCTCCAAATACATTTTCGGTTCTTaGACCCCTTGGGAACATCAT +
Preference number: 5 (lower is better)
Translates to: KHDDCFSSHPGSLRRISKYIFGS*TPWEHH
Trigger: ATGATGTTCCCAAGGGGTCAAAGAACCGAAAATGTA...TTTGGAGATCCTTCTGAGAGAGCCTGGGTGGCTGGAAAAGCAATCGTCATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR CAA 90 bp CAAACGTACAGTGCAGTGGTGGTTCAAGAAGTTTTGCGAAGCAGGCGAGACCCTTTTATGTGCTTCAAATaGTATGTGGCCCTTTTTCAC +
Preference number: 5 (lower is better)
Translates to: QTYSAVVVQEVLRSRRDPFMCFK*YVALFH
Trigger: GTGAAAAAGGGCCACATACAATTTGAAGCACATAAA...AGGGTCTCGCCTGCTTCGCAAAACTTCTTGAACCACCACTGCACTGTACGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644863.1
CDS-3UTR CAA 90 bp AGTCCTTTTTGGATTATCAGAGCTCTTTCTGGCTCGAGATTTAGCGCAAGGCTTTCTCTCGAGAACACTTaGAGATCAAAGCACCCTCAG +
Preference number: 5 (lower is better)
Translates to: SPFWIIRALSGSRFSARLSLENT*RSKHPQ
Trigger: CTGAGGGTGCTTTGATCTCAAAGTGTTCTCGAGAGA...AAGCCTTGCGCTAAATCTCGAGCCAGAAAGAGCTCTGATAATCCAAAAAGGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638627.2
CDS-3UTR CAA 90 bp AGATGTATTGGCTTTCTAGCTACCCATGGAGAATTTCAACTTTTGCCTTGTCCCACACACCAGGCTTCGTaGGGGTTTATTCTTCTCTCG +
Preference number: 5 (lower is better)
Translates to: RCIGFLATHGEFQLLPCPTHQAS*GFILLS
Trigger: CGAGAGAAGAATAAACCCCAACGAAGCCTGGTGTGT...GGGACAAGGCAAAAGTTGAAATTCTCCATGGGTAGCTAGAAAGCCAATACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GCACATACCCAAATACCACCCTGCGTTAAGGACCAGAAGTTTTCTAAGATGAAAAGCAGAGCTTCACTTTaGAACCACACACCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: AHTQIPPCVKDQKFSKMKSRASL*NHTPGF
Trigger: GAAGCCTGGTGTGTGGTTCAAAAGTGAAGCTCTGCT...TTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TTGGGAACATCATACTGTTCTGCAAGTCCAACACTGGCTTCCCATTTACTCAAAAGCAGAGCTTCACTTTaGAACCACACACCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: LGTSYCSASPTLASHLLKSRASL*NHTPGF
Trigger: GAAGCCTGGTGTGTGGTTCAAAAGTGAAGCTCTGCT...TTTGAGTAAATGGGAAGCCAGTGTTGGACTTGCAGAACAGTATGATGTTCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638627.2
CDS-3UTR CAA 90 bp GACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTGGATTTTCTTTGTGTTaGCACTTTATACTTCGGAAC +
Preference number: 5 (lower is better)
Translates to: DPSLSVSLVGAHWIFIHGGFSLC*HFILRN
Trigger: GTTCCGAAGTATAAAGTGCAAACACAAAGAAAATCC...ACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AGATGTATTGGCTTTCTAGCTACCCATGGAGAATTTCAACTTTTGCCTTGTCCCATTTGGATGAAGGCTTaGATCGTCCACAGTTGCGCC +
Preference number: 5 (lower is better)
Translates to: RCIGFLATHGEFQLLPCPIWMKA*IVHSCA
Trigger: GGCGCAACTGTGGACGATCAAAGCCTTCATCCAAAT...GGGACAAGGCAAAAGTTGAAATTCTCCATGGGTAGCTAGAAAGCCAATACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTGCCCTCAATGGAAAGCATCTCGCAATTaGGATGAAGGCTTTGATCGT +
Preference number: 5 (lower is better)
Translates to: TDLKEHHFLPRVPRCPQWKASRN*DEGFDR
Trigger: ACGATCAAAGCCTTCATCCAAATTGCGAGATGCTTT...CCATTGAGGGCACCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTCTTTTTAGGCACCACTaGATTTACACCATTGAGTTC +
Preference number: 5 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGLFRHH*IYTIEF
Trigger: GAACTCAATGGTGTAAATCAAGTGGTGCCTAAAAAG...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCACTTTTTAGGCACCACTaGATTTACACCATTGAGTTC +
Preference number: 5 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSLFRHH*IYTIEF
Trigger: GAACTCAATGGTGTAAATCAAGTGGTGCCTAAAAAG...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAACTGGAGGCTCTTCTTaGGTTGAAATCAAAGAATTC +
Preference number: 5 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSTGGSS*VEIKEF
Trigger: GAATTCTTTGATTTCAACCAAAGAAGAGCCTCCAGT...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCCCAGGGTCTAAATCATaGGATTCAAGAAGTTTCTTA +
Preference number: 5 (lower is better)
Translates to: PKSVCLLGWGPLDFHTWFPGSKS*DSRSFL
Trigger: TAAGAAACTTCTTGAATCCAATGATTTAGACCCTGG...GAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGCTCCACCAAAATCTTTaGAATAAGATGTGGCACAAG +
Preference number: 5 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLLHQNL*NKMWHK
Trigger: CTTGTGCCACATCTTATTCAAAAGATTTTGGTGGAG...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCAAGCCTGGAATCTCTTTaGACGAGTCATCATTTTTCA +
Preference number: 5 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSSLESL*TSHHFS
Trigger: TGAAAAATGATGACTCGTCAAAAGAGATTCCAGGCT...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ACTGATTTGAAAGAACACCATTTCCTCCCAAGGGTTCCTAGGTGCCCTCAATGGGAAATCGCCACTGATTaGAAAGAACACCATTTCCTC +
Preference number: 5 (lower is better)
Translates to: TDLKEHHFLPRVPRCPQWEIATD*KEHHFL
Trigger: GAGGAAATGGTGTTCTTTCAAATCAGTGGCGATTTC...CCATTGAGGGCACCTAGGAACCCTTGGGAGGAAATGGTGTTCTTTCAAATCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGGGAACCTCAATAAGAACTaGAGGAAATTGGGACCAAAT +
Preference number: 5 (lower is better)
Translates to: HVEKLGERDPSLSVSLVGNLNKN*RKLGPN
Trigger: ATTTGGTCCCAATTTCCTCAAGTTCTTATTGAGGTT...CCCAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AAAGCCTTGGAATCCAGGCTCACAGGGATGAGGCCTGTATCTCTCATCAGTGACACACTTCTTCCGAGGTaGTGGATTTCTAGTTTAATT +
Preference number: 5 (lower is better)
Translates to: KALESRLTGMRPVSLISDTLLPR*WISSLI
Trigger: AATTAAACTAGAAATCCACAACCTCGGAAGAAGTGT...GTCACTGATGAGAGATACAGGCCTCATCCCTGTGAGCCTGGATTCCAAGGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTAGGGCTGCTTTTTCATaGCTGCCGTCCACTTCATTT +
Preference number: 5 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPRAAFS*LPSTSF
Trigger: AAATGAAGTGGACGGCAGCAATGAAAAAGCAGCCCT...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439151.7
CDS-3UTR CAA 90 bp CAAACGTACAGTGCAGTGGTGGTTCAAGAAGTTTTGCGAAGCAGGCGAGACCCTAGACTTTTTCTTAGGTaGACATCAGGTTCAAAATGG +
Preference number: 5 (lower is better)
Translates to: QTYSAVVVQEVLRSRRDPRLFLR*TSGSKW
Trigger: CCATTTTGAACCTGATGTCAACCTAAGAAAAAGTCT...AGGGTCTCGCCTGCTTCGCAAAACTTCTTGAACCACCACTGCACTGTACGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644863.1
CDS TCA 90 bp GTGCGCCTTTGGTTTAAACGCTGCCACCGCTTTTTAGGCACCACTTaGTTTACACCATTGAGTTCATCATTCTCACTGTTCATTACAGAG +
Preference number: 5 (lower is better)
Translates to: VRLWFKRCHRFLGTT*FTPLSSSFSLFITE
Trigger: CTCTGTAATGAACAGTGAGAATGATGAACTCAATGGTGTAAATCAAGTGGTGCCTAAAAAGCGGTGGCAGCGTTTAAACCAAAGGCGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 90 bp GACGTCTCGGTTCCAGGCTCTGCACTCTTAGTACAACCCATTAAGTaGTCTGTATGTGAGTTACTAATGAGAGGCTTCTGTTTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: DVSVPGSALLVQPIK*SVCELLMRGFCFAF
Trigger: AAAAGCAAAACAGAAGCCTCTCATTAGTAACTCACATACAGACCACTTAATGGGTTGTACTAAGAGTGCAGAGCCTGGAACCGAGACGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 90 bp CGCTCGGTCTTTAAGGCTTTACGGTTCACTGTGTTCTTTACCATTTaGGCTGAAAAAGCATCTCGCAATTTGGATGAAGGCTTTGATCGT +
Preference number: 5 (lower is better)
Translates to: RSVFKALRFTVFFTI*AEKASRNLDEGFDR
Trigger: ACGATCAAAGCCTTCATCCAAATTGCGAGATGCTTTTTCAGCCCAAATGGTAAAGAACACAGTGAACCGTAAAGCCTTAAAGACCGAGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGAGACTTTTTCTTAGGTaGACAAAATGGCAATTCCTG +
Preference number: 5 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLRLFLR*TKWQFL
Trigger: CAGGAATTGCCATTTTGTCAACCTAAGAAAAAGTCT...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GTCCTTTTTGGATTATCAGAGCTCTTTCTGGCTCGAGATTTAGCGCAAGGCTTTCTGACTCAGGATCATTaGTGCAGTCTTCAAATGGCA +
Preference number: 5 (lower is better)
Translates to: VLFGLSELFLARDLAQGFLTQDH*CSLQMA
Trigger: TGCCATTTGAAGACTGCACAAATGATCCTGAGTCAG...AAAGCCTTGCGCTAAATCTCGAGCCAGAAAGAGCTCTGATAATCCAAAAAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR CAA 90 bp CCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTCATTTATGTGCTTCAAATaGTATGTGGCCCTTTTTCAC +
Preference number: 5 (lower is better)
Translates to: PSLSVSLVGAHWIFIHGSFMCFK*YVALFH
Trigger: GTGAAAAAGGGCCACATACAATTTGAAGCACATAAA...TGAACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CTCCCCAAATGGTACCCTGGGGGCAGCTTGTTTGTTCATGTGACATTGATTGGTGGATTTTCTTTGTGTTaGCACTTTATACTTCGGAAC +
Preference number: 5 (lower is better)
Translates to: LPKWYPGGSLFVHVTLIGGFSLC*HFILRN
Trigger: GTTCCGAAGTATAAAGTGCAAACACAAAGAAAATCC...ACCAATCAATGTCACATGAACAAACAAGCTGCCCCCAGGGTACCATTTGGGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ACCATGTGGAAAAGTTGGGGGAAAGAGACCCAAGTCTGTCTGTCTCCTTGGTTGAGAAAAGTAATGGTTTaGATGGCTTTGATGTTCCAG +
Preference number: 5 (lower is better)
Translates to: TMWKSWGKETQVCLSPWLRKVMV*MALMFQ
Trigger: CTGGAACATCAAAGCCATCAAAACCATTACTTTTCT...CAACCAAGGAGACAGACAGACTTGGGTCTCTTTCCCCCAACTTTTCCACATGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ATGACAGGCTCCCACAGCAACTACCAAGCAGTGACTTGGAATGTCTACACATGGAGAAAAGTAATGGTTTaGATGGCTTTGATGTTCCAG +
Preference number: 5 (lower is better)
Translates to: MTGSHSNYQAVTWNVYTWRKVMV*MALMFQ
Trigger: CTGGAACATCAAAGCCATCAAAACCATTACTTTTCT...CCATGTGTAGACATTCCAAGTCACTGCTTGGTAGTTGCTGTGGGAGCCTGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGACAATGGGTTGATTCTTaGGCCTTACACCCAAGAAGC +
Preference number: 5 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRQWVDS*ALHPRS
Trigger: GCTTCTTGGGTGTAAGGCCAAAGAATCAACCCATTG...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGCAATGGGTTGATTCTTaGGCCTTACACCCAAGAAGC +
Preference number: 5 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVQWVDS*ALHPRS
Trigger: GCTTCTTGGGTGTAAGGCCAAAGAATCAACCCATTG...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGCTGAGGCCTGAGTTGTaGGCTCATATAAAAAGGCCT +
Preference number: 5 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVLRPEL*AHIKRP
Trigger: AGGCCTTTTTATATGAGCCAACAACTCAGGCCTCAG...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGGTTCCCTCCGTGGAATaGATGGGAGTAACCTCAATA +
Preference number: 5 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVVPSVE*MGVTSI
Trigger: TATTGAGGTTACTCCCATCAATTCCACGGAGGGAAC...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ACCCAAGTCTGTCTGTCTCCTTGGTTGGGGCCCACTGGATTTTCATACATGGTTACACTTCTTCCGAGGTaGTGGATTTCTAGTTTAATT +
Preference number: 5 (lower is better)
Translates to: TQVCLSPWLGPTGFSYMVTLLPR*WISSLI
Trigger: AATTAAACTAGAAATCCACAACCTCGGAAGAAGTGT...AACCATGTATGAAAATCCAGTGGGCCCCAACCAAGGAGACAGACAGACTTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS TCA 90 bp GATAACTGCATAGTACACCCATTAAGTGGCTCAGAAAAATTGGATTaGCCATTACCGAAAGGGCTGTCCTTGTCTTCAGGGGCATCTAAA +
Preference number: 5 (lower is better)
Translates to: DNCIVHPLSGSEKLD*PLPKGLSLSSGASK
Trigger: TTTAGATGCCCCTGAAGACAAGGACAGCCCTTTCGGTAATGGTCAATCCAATTTTTCTGAGCCACTTAATGGGTGTACTATGCAGTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000439151.7
ENST00000512992.1
ENST00000602285.1
CDS TCA 90 bp GAAAGGATTCTGATCCATCAGCAGACCCATTTAAATACTCTACATTaGTCATGGAGGCCAAATCCTGTAGTCTCCGCAGTGGAATGTAAC +
Preference number: 5 (lower is better)
Translates to: ERILIHQQTHLNTLH*SWRPNPVVSAVECN
Trigger: GTTACATTCCACTGCGGAGACTACAGGATTTGGCCTCCATGATCAATGTAGAGTATTTAAATGGGTCTGCTGATGGATCAGAATCCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439151.7
ENST00000512992.1
ENST00000602285.1
CDS GCA 90 bp GTACAGCATCAAGAGTCACACTTGGAAGCTGATTCAGTTTTCTTTTaGGCTCGGTCTTTAAGGCTTTACGGTTCACTGTGTTCTTTACCA +
Preference number: 5 (lower is better)
Translates to: VQHQESHLEADSVFF*ARSLRLYGSLCSLP
Trigger: TGGTAAAGAACACAGTGAACCGTAAAGCCTTAAAGACCGAGCGCAAAAGAAAACTGAATCAGCTTCCAAGTGTGACTCTTGATGCTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS GCA 90 bp ATCCTCTGTGACTGGCTGTTCTGGGTCCATTTCAGAATCTACATCTaGATCGTCCACACAAGTAAAATTCTCAAAGTGCAGAAAGCCATT +
Preference number: 5 (lower is better)
Translates to: ILCDWLFWVHFRIYI*IVHTSKILKVQKAI
Trigger: AATGGCTTTCTGCACTTTGAGAATTTTACTTGTGTGGACGATGCAGATGTAGATTCTGAAATGGACCCAGAACAGCCAGTCACAGAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439151.7
ENST00000602285.1
CDS-3UTR CAA 90 bp CTGTCCAACTTGATTGAACCAGGAATACATTTTCGGTTCTTTGACCCCTTGGGATACATTTTCGGTTCTTaGACCCCTTGGGAACATCAT +
Preference number: 5 (lower is better)
Translates to: LSNLIEPGIHFRFFDPLGYIFGS*TPWEHH
Trigger: ATGATGTTCCCAAGGGGTCAAAGAACCGAAAATGTA...TCCCAAGGGGTCAAAGAACCGAAAATGTATTCCTGGTTCAATCAAGTTGGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR CAA 90 bp CACAGTGATTTAAGTCATCTCAAACTCAGTAACAGGGTAAAGCAGACATTTAAACTTCCTGGGGCAGTGTaGGACCCTGTGAGGCTATTT +
Preference number: 5 (lower is better)
Translates to: HSDLSHLKLSNRVKQTFKLPGAV*DPVRLF
Trigger: AAATAGCCTCACAGGGTCCAACACTGCCCCAGGAAG...TTTAAATGTCTGCTTTACCCTGTTACTGAGTTTGAGATGACTTAAATCACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GCACATACCCAAATACCACCCTGCGTTAAGGACCAGAAGTTTTCTAAGATGAAAGGCTTGTCAAATATCTaGGTAGTGCCTCCACCAAAA +
Preference number: 5 (lower is better)
Translates to: AHTQIPPCVKDQKFSKMKGLSNI*VVPPPK
Trigger: TTTTGGTGGAGGCACTACCAAGATATTTGACAAGCC...TTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTTTTCGCTTCCTTGGCTaGTCAAATATCTTGGTAGTG +
Preference number: 5 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPFRFLG*SNILVV
Trigger: CACTACCAAGATATTTGACAAGCCAAGGAAGCGAAA...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGTTAATTCCTCAAACCTaGCTGCAGCTTCCTGAAGAG +
Preference number: 5 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVLIPQT*LQLPEE
Trigger: CTCTTCAGGAAGCTGCAGCAAGGTTTGAGGAATTAA...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGTTCAACCTCTGGATATaGGCGCTTGGAAAAGCACTG +
Preference number: 5 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKFNLWI*ALGKAL
Trigger: CAGTGCTTTTCCAAGCGCCAATATCCAGAGGTTGAA...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS TCA 90 bp AAGAGAAAAGTAATGGTTTTGATGGCTTTGATGTTCCAGAGTCACTaGCATCCTCACCTAAGGATCTGTAAGAGAGTTCCTTCAACTCGG +
Preference number: 5 (lower is better)
Translates to: KRKVMVLMALMFQSH*HPHLRICKRVPSTR
Trigger: CCGAGTTGAAGGAACTCTCTTACAGATCCTTAGGTGAGGATGTCAGTGACTCTGGAACATCAAAGCCATCAAAACCATTACTTTTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 90 bp ATGATGATGAAGTTCCAGGTAATTCTAGCATGTTTCCTAATGTACTaGTACTGGAATCTGGATCATCCGAAAGGGCTGTCCTTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: MMMKFQVILACFLMY*YWNLDHPKGLSLSS
Trigger: TGAAGACAAGGACAGCCCTTTCGGATGATCCAGATTCCAGTACCAGTACATTAGGAAACATGCTAGAATTACCTGGAACTTCATCATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000508896.5
ENST00000510954.5
ENST00000511258.5
ENST00000638627.2
ENST00000644863.1
CDS-3UTR CAA 90 bp GCACATACCCAAATACCACCCTGCGTTAAGGACCAGAAGTTTTCTAAGATGAAATCTAAATTCACTGGATaGGAAAAGGGCAGCAGACAA +
Preference number: 5 (lower is better)
Translates to: AHTQIPPCVKDQKFSKMKSKFTG*EKGSRQ
Trigger: TTGTCTGCTGCCCTTTTCCAATCCAGTGAATTTAGA...TTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AAAATTCTCTTTGCTAACATTACCGGCGGTGACCAAACAATGTGTTTGGGCAGATCTAAATTCACTGGATaGGAAAAGGGCAGCAGACAA +
Preference number: 5 (lower is better)
Translates to: KILFANITGGDQTMCLGRSKFTG*EKGSRQ
Trigger: TTGTCTGCTGCCCTTTTCCAATCCAGTGAATTTAGA...TCTGCCCAAACACATTGTTTGGTCACCGCCGGTAATGTTAGCAAAGAGAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511258.5
CDS-3UTR CAA 90 bp GCACATACCCAAATACCACCCTGCGTTAAGGACCAGAAGTTTTCTAAGATGAAACGGAACTTGGGCTGTTaGCTTTTCGAATGTAATAGA +
Preference number: 5 (lower is better)
Translates to: AHTQIPPCVKDQKFSKMKRNLGC*LFECNR
Trigger: TCTATTACATTCGAAAAGCAAACAGCCCAAGTTCCG...TTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGGGCTTGTCAAATATCTaGGTAGTGCCTCCACCAAAA +
Preference number: 5 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKGLSNI*VVPPPK
Trigger: TTTTGGTGGAGGCACTACCAAGATATTTGACAAGCC...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TGTCCTGTGAGACATCTAGACTGCTGTCAAGTTGATTACCTACCAAAGCCTACTAGCCTGGAATCTCTTTaGACGAGTCATCATTTTTCA +
Preference number: 5 (lower is better)
Translates to: CPVRHLDCCQVDYLPKPTSLESL*TSHHFS
Trigger: TGAAAAATGATGACTCGTCAAAAGAGATTCCAGGCT...AGTAGGCTTTGGTAGGTAATCAACTTGACAGCAGTCTAGATGTCTCACAGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TATTCTTATTTCAATTTACACTATAGCAGCCTCTGGCCCTGTTGCACTGGCCCTCCTGTGCGACATTCATaGCAGATAAATTTTCCTCTT +
Preference number: 5 (lower is better)
Translates to: YSYFNLHYSSLWPCCTGPPVRHS*QINFPL
Trigger: AAGAGGAAAATTTATCTGCAATGAATGTCGCACAGG...AGGGCCAGTGCAACAGGGCCAGAGGCTGCTATAGTGTAAATTGAAATAAGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CACAGTGATTTAAGTCATCTCAAACTCAGTAACAGGGTAAAGCAGACATTTAAATTCCCTGCTGGTCGCTaGGTCAGATTGAGACAGTCT +
Preference number: 5 (lower is better)
Translates to: HSDLSHLKLSNRVKQTFKFPAGR*VRLRQS
Trigger: AGACTGTCTCAATCTGACCAAGCGACCAGCAGGGAA...TTTAAATGTCTGCTTTACCCTGTTACTGAGTTTGAGATGACTTAAATCACTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CACAGTGATTTAAGTCATCTCAAACTCAGTAACAGGGTAAAGCAGACATTTAAAAGCGACAGCATCTGGTaGGTGTCAGCAGGAGGTTTA +
Preference number: 5 (lower is better)
Translates to: HSDLSHLKLSNRVKQTFKSDSIW*VSAGGL
Trigger: TAAACCTCCTGCTGACACCAACCAGATGCTGTCGCT...TTTAAATGTCTGCTTTACCCTGTTACTGAGTTTGAGATGACTTAAATCACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGCCAAGGCAAACACTCTaGAGATCTCAATTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKPRQTL*RSQFPS
Trigger: GCTTGGAAATTGAGATCTCAAGAGTGTTTGCCTTGG...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGATCAATGACAGCTATTTaGCTATTAGACTGGGTTGGC +
Preference number: 5 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRSMTAI*LLDWVG
Trigger: GCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGA...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS CCA 90 bp TTTCAAACTGCACTCCTCATTTATAACTGGGGGTTCTGCCATAACTaGATTTTCTTTGTGTTTGCACTTTATACTTCGGAACTTGGGCTG +
Preference number: 5 (lower is better)
Translates to: FQTALLIYNWGFCHN*IFFVFALYTSELGL
Trigger: CAGCCCAAGTTCCGAAGTATAAAGTGCAAACACAAAGAAAATCCAGTTATGGCAGAACCCCCAGTTATAAATGAGGAGTGCAGTTTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TTGGGAACATCATACTGTTCTGCAAGTCCAACACTGGCTTCCCATTTACTCAAATCTTCACTGTCCAACTaGATTGAACCAGGAATACAT +
Preference number: 5 (lower is better)
Translates to: LGTSYCSASPTLASHLLKSSLSN*IEPGIH
Trigger: ATGTATTCCTGGTTCAATCAAGTTGGACAGTGAAGA...TTTGAGTAAATGGGAAGCCAGTGTTGGACTTGCAGAACAGTATGATGTTCCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR CAA 90 bp CAACACTGGCTTCCCATTTACTCAAAATTTTCTGAGGAACCTTATGCCTATATCCTGACTCAGGATCATTaGTGCAGTCTTCAAATGGCA +
Preference number: 5 (lower is better)
Translates to: QHWLPIYSKFSEEPYAYILTQDH*CSLQMA
Trigger: TGCCATTTGAAGACTGCACAAATGATCCTGAGTCAG...GATATAGGCATAAGGTTCCTCAGAAAATTTTGAGTAAATGGGAAGCCAGTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR CAA 90 bp ATTTTCATACATGGTTCACACAACCATAAGCCCCCACTGGCTAATGTCACAAGATTTATACTTCGGAACTaGGGCTGTTTGCTTTTCGAA +
Preference number: 5 (lower is better)
Translates to: IFIHGSHNHKPPLANVTRFILRN*GCLLFE
Trigger: TTCGAAAAGCAAACAGCCCAAGTTCCGAAGTATAAA...TCTTGTGACATTAGCCAGTGGGGGCTTATGGTTGTGTGAACCATGTATGAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGCTCCACCAAAATCTTTaGAATAAGATGTGGCACAAG +
Preference number: 5 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVLHQNL*NKMWHK
Trigger: CTTGTGCCACATCTTATTCAAAAGATTTTGGTGGAG...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGAGTGATATCATGTTCTaGAGCATAGCGAATTCGAGC +
Preference number: 5 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKSDIMF*SIANSS
Trigger: GCTCGAATTCGCTATGCTCAAGAACATGATATCACT...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp TTGGTTTTCTTTGACGTTTACTTTCATAATTTCCTTGTGCACCTGCTCCTGTACACTTTCATAATTTCCTaGTGCACCTGCTCCTGTACC +
Preference number: 5 (lower is better)
Translates to: LVFFDVYFHNFLVHLLLYTFIIS*CTCSCT
Trigger: GGTACAGGAGCAGGTGCACAAGGAAATTATGAAAGT...GTACAGGAGCAGGTGCACAAGGAAATTATGAAAGTAAACGTCAAAGAAAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375350.3
CDS GCA 90 bp AGAGCAGCATTTCAAACTGCACTCCTCATTTATAACTGGGGGTTCTaGCATAACTGGATTTTCTTTGTGTTTGCACTTTATACTTCGGAA +
Preference number: 5 (lower is better)
Translates to: RAAFQTALLIYNWGF*HNWIFFVFALYTSE
Trigger: TTCCGAAGTATAAAGTGCAAACACAAAGAAAATCCAGTTATGGCAGAACCCCCAGTTATAAATGAGGAGTGCAGTTTGAAATGCTGCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS GCA 90 bp TCAGAAATTTTACCAGGATCAGATTGCTTAACCTTGCTATCGAAATaGACATCAGAAAAATGGTCACCATCTTCACTTGTTAAGTGGCCC +
Preference number: 5 (lower is better)
Translates to: SEILPGSDCLTLLSK*TSEKWSPSSLVKWP
Trigger: GGGCCACTTAACAAGTGAAGATGGTGACCATTTTTCTGATGTGCATTTCGATAGCAAGGTTAAGCAATCTGATCCTGGTAAAATTTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 90 bp GGTATCAGAAGAGCAGCATTTCAAACTGCACTCCTCATTTATAACTaGGGGTTCTGCCATAACTGGATTTTCTTTGTGTTTGCACTTTAT +
Preference number: 5 (lower is better)
Translates to: GIRRAAFQTALLIYN*GFCHNWIFFVFALY
Trigger: ATAAAGTGCAAACACAAAGAAAATCCAGTTATGGCAGAACCCCCAGTTATAAATGAGGAGTGCAGTTTGAAATGCTGCTCTTCTGATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 90 bp TCAAAGTGCAGAAAGCCATTCTTGATAGTCTTTGTTACTTTTACCTaGAGTTCAGGGGAGTTATTACAAGAGGGTTCCTGTTTCATAGCA +
Preference number: 5 (lower is better)
Translates to: SKCRKPFLIVFVTFT*SSGELLQEGSCFIA
Trigger: TGCTATGAAACAGGAACCCTCTTGTAATAACTCCCCTGAACTCCAGGTAAAAGTAACAAAGACTATCAAGAATGGCTTTCTGCACTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439151.7
ENST00000602285.1
CDS-3UTR CAA 90 bp GCACATACCCAAATACCACCCTGCGTTAAGGACCAGAAGTTTTCTAAGATGAAAAGACTTTTTCTTAGGTaGACAAAATGGCAATTCCTG +
Preference number: 5 (lower is better)
Translates to: AHTQIPPCVKDQKFSKMKRLFLR*TKWQFL
Trigger: CAGGAATTGCCATTTTGTCAACCTAAGAAAAAGTCT...TTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp ATTGAACCAGGAATACATTTTCGGTTCTTTGACCCCTTGGGAACATCATACTGTTCTTCACTGTCCAACTaGATTGAACCAGGAATACAT +
Preference number: 5 (lower is better)
Translates to: IEPGIHFRFFDPLGTSYCSSLSN*IEPGIH
Trigger: ATGTATTCCTGGTTCAATCAAGTTGGACAGTGAAGA...ACAGTATGATGTTCCCAAGGGGTCAAAGAACCGAAAATGTATTCCTGGTTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR CAA 90 bp CCAAGAGTCACATTTCCCAACAGTTGTTGTGACTCTGCTTCTAATTGGATAGTGTTTATGTGCTTCAAATaGTATGTGGCCCTTTTTCAC +
Preference number: 5 (lower is better)
Translates to: PRVTFPNSCCDSASNWIVFMCFK*YVALFH
Trigger: GTGAAAAAGGGCCACATACAATTTGAAGCACATAAA...CACTATCCAATTAGAAGCAGAGTCACAACAACTGTTGGGAAATGTGACTCTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp AAACAGCCATTAAGCAACAGGTCATGTTCTGACTCAGGATCATTTGTGCAGTCTTTTATGTGCTTCAAATaGTATGTGGCCCTTTTTCAC +
Preference number: 5 (lower is better)
Translates to: KQPLSNRSCSDSGSFVQSFMCFK*YVALFH
Trigger: GTGAAAAAGGGCCACATACAATTTGAAGCACATAAA...AGACTGCACAAATGATCCTGAGTCAGAACATGACCTGTTGCTTAATGGCTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638627.2
ENST00000644863.1
CDS-3UTR CAA 90 bp TGTATCAATGACAGCTATTTTGCTATTAGACTGGGTTGGCTCCAGCAAGATAAGACTGGAGGCTCTTCTTaGGTTGAAATCAAAGAATTC +
Preference number: 5 (lower is better)
Translates to: CINDSYFAIRLGWLQQDKTGGSS*VEIKEF
Trigger: GAATTCTTTGATTTCAACCAAAGAAGAGCCTCCAGT...CTTATCTTGCTGGAGCCAACCCAGTCTAATAGCAAAATAGCTGTCATTGATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp GCACATACCCAAATACCACCCTGCGTTAAGGACCAGAAGTTTTCTAAGATGAAATTTAAATACTCTACATaGATCATGGAGGCCAAATCC +
Preference number: 5 (lower is better)
Translates to: AHTQIPPCVKDQKFSKMKFKYST*IMEAKS
Trigger: GGATTTGGCCTCCATGATCAATGTAGAGTATTTAAA...TTTCATCTTAGAAAACTTCTGGTCCTTAACGCAGGGTGGTATTTGGGTATGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439151.7
CDS GCA 90 bp AAAGCCTTAGCAAAGAATATATCCGAGTTAATCTTGTTCTCACTGTaGTTCTTTCACCTCTTAAAATCCTACTATAGAAAAAGGCGGGGG +
Preference number: 5 (lower is better)
Translates to: KALAKNISELILFSL*FFHLLKSYYRKRRG
Trigger: CCCCCGCCTTTTTCTATAGTAGGATTTTAAGAGGTGAAAGAAGCACAGTGAGAACAAGATTAACTCGGATATATTCTTTGCTAAGGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515735.1
CDS-3UTR CAA 90 bp CCCTTCTTGGGCATAAATCCAGGGTCTAAATCATTGGATTCAAGAAGTTTCTTACCAGGGTCTAAATCATaGGATTCAAGAAGTTTCTTA +
Preference number: 5 (lower is better)
Translates to: PFLGINPGSKSLDSRSFLPGSKS*DSRSFL
Trigger: TAAGAAACTTCTTGAATCCAATGATTTAGACCCTGG...TAAGAAACTTCTTGAATCCAATGATTTAGACCCTGGATTTATGCCCAAGAAGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375350.3
CDS-3UTR CAA 90 bp CACAGTGATTTAAGTCATCTCAAACTCAGTAACAGGGTAAAGCAGACATTTAAAATCAATGCTAAAGATTaGGTTCAGAAGAGGGTCAAC +
Preference number: 5 (lower is better)
Translates to: HSDLSHLKLSNRVKQTFKINAKD*VQKRVN
Trigger: GTTGACCCTCTTCTGAACCAAATCTTTAGCATTGAT...TTTAAATGTCTGCTTTACCCTGTTACTGAGTTTGAGATGACTTAAATCACTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS-3UTR CAA 90 bp CACAGTGATTTAAGTCATCTCAAACTCAGTAACAGGGTAAAGCAGACATTTAAAGGATTTTCTTTGTGTTaGCACTTTATACTTCGGAAC +
Preference number: 5 (lower is better)
Translates to: HSDLSHLKLSNRVKQTFKGFSLC*HFILRN
Trigger: GTTCCGAAGTATAAAGTGCAAACACAAAGAAAATCC...TTTAAATGTCTGCTTTACCCTGTTACTGAGTTTGAGATGACTTAAATCACTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354179.8
ENST00000439151.7
CDS GCA 72 bp GCAGGTAGTTGCTGGCCTCCGACCATCTGCTTCGCCTaGTTCACCAGGCCCGGGGATTGGCTAAGAGGCCCT +
Preference number: 6 (lower is better)
Translates to: AGSCWPPTICFA*FTRPGDWLRGP
Trigger: AGGGCCTCTTAGCCAATCCCCGGGCCTGGTGAAGCAGGCGAAGCAGATGGTCGGAGGCCAGCAACTACCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS GCA 72 bp GCGGCAAGTGCAGGTAGTTGCTGGCCTCCGACCATCTaGTTCGCCTGCTTCACCAGGCCCGGGGATTGGCTA +
Preference number: 6 (lower is better)
Translates to: AASAGSCWPPTI*FACFTRPGDWL
Trigger: TAGCCAATCCCCGGGCCTGGTGAAGCAGGCGAAGCAGATGGTCGGAGGCCAGCAACTACCTGCACTTGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS GCA 72 bp GAGCAGCCATTCCTGTTGATTGCTCTGCCAGGTGAGTaGTTGGCCCTGGAGGCAGCGGTACTGGGGGAGGCA +
Preference number: 6 (lower is better)
Translates to: EQPFLLIALPGE*LALEAAVLGEA
Trigger: TGCCTCCCCCAGTACCGCTGCCTCCAGGGCCAAGCACTCACCTGGCAGAGCAATCAACAGGAATGGCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 72 bp CTTGGGCTGGTCACTGGAGAGGGTTTGTCGCTTAGCTaGGGTCTTGGTCCTGCCACTGCTGGTGGCCTGTCC +
Preference number: 6 (lower is better)
Translates to: LGLVTGEGLSLS*GLGPATAGGLS
Trigger: GGACAGGCCACCAGCAGTGGCAGGACCAAGACCCCAGCTAAGCGACAAACCCTCTCCAGTGACCAGCCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 72 bp CTTGGGTCAGCCGTCCCCAGAGGTCTTTCCAGTGGTTaGGACCTGACTGAGGGTGAGGAGCTTGGGCTGGTC +
Preference number: 6 (lower is better)
Translates to: LGSAVPRGLSSG*DLTEGEELGLV
Trigger: GACCAGCCCAAGCTCCTCACCCTCAGTCAGGTCCCAACCACTGGAAAGACCTCTGGGGACGGCTGACCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CAA 90 bp GTGCCTGAGCAGCCATTCCTGTTGATTGCTCTGCCAGGTGAGTGCTaGGCCCTGGAGGCAGCGGTACTGGGGGAGGCACATACTCACGGA +
Preference number: 6 (lower is better)
Translates to: VPEQPFLLIALPGEC*ALEAAVLGEAHTHG
Trigger: TCCGTGAGTATGTGCCTCCCCCAGTACCGCTGCCTCCAGGGCCAAGCACTCACCTGGCAGAGCAATCAACAGGAATGGCTGCTCAGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 72 bp GATTGCCCACTCTTGGCGGCAAGTGCAGGTAGTTGCTaGCCTCCGACCATCTGCTTCGCCTGCTTCACCAGG +
Preference number: 6 (lower is better)
Translates to: DCPLLAASAGSC*PPTICFACFTR
Trigger: CCTGGTGAAGCAGGCGAAGCAGATGGTCGGAGGCCAGCAACTACCTGCACTTGCCGCCAAGAGTGGGCAATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CAA 72 bp CAGCCATTCCTGTTGATTGCTCTGCCAGGTGAGTGCTaGGCCCTGGAGGCAGCGGTACTGGGGGAGGCACAT +
Preference number: 6 (lower is better)
Translates to: QPFLLIALPGEC*ALEAAVLGEAH
Trigger: ATGTGCCTCCCCCAGTACCGCTGCCTCCAGGGCCAAGCACTCACCTGGCAGAGCAATCAACAGGAATGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CAA 72 bp GGGGCCTTCCCGAGAGACCTAAAAGATTGCCCACTCTaGGCGGCAAGTGCAGGTAGTTGCTGGCCTCCGACC +
Preference number: 6 (lower is better)
Translates to: GAFPRDLKDCPL*AASAGSCWPPT
Trigger: GGTCGGAGGCCAGCAACTACCTGCACTTGCCGCCAAGAGTGGGCAATCTTTTAGGTCTCTCGGGAAGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CAA 90 bp AGGGAGGCTGGGGCCTTCCCGAGAGACCTAAAAGATTGCCCACTCTaGGCGGCAAGTGCAGGTAGTTGCTGGCCTCCGACCATCTGCTTC +
Preference number: 6 (lower is better)
Translates to: REAGAFPRDLKDCPL*AASAGSCWPPTICF
Trigger: GAAGCAGATGGTCGGAGGCCAGCAACTACCTGCACTTGCCGCCAAGAGTGGGCAATCTTTTAGGTCTCTCGGGAAGGCCCCAGCCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS TCA 72 bp CAGCTGCGGCAACTCAGCATGTCCACCTCCAAGTTCTaGCTGAGCCAAGGGGCCCTCCAAAAACGGAGCCTC +
Preference number: 6 (lower is better)
Translates to: QLRQLSMSTSKF*LSQGALQKRSL
Trigger: GAGGCTCCGTTTTTGGAGGGCCCCTTGGCTCAGTCAGAACTTGGAGGTGGACATGCTGAGTTGCCGCAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS GCA 72 bp AGGGAGGCTGGGGCCTTCCCGAGAGACCTAAAAGATTaGCCACTCTTGGCGGCAAGTGCAGGTAGTTGCTGG +
Preference number: 6 (lower is better)
Translates to: REAGAFPRDLKD*PLLAASAGSCW
Trigger: CCAGCAACTACCTGCACTTGCCGCCAAGAGTGGGCAATCTTTTAGGTCTCTCGGGAAGGCCCCAGCCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS GCA 72 bp CAATGTCTGTGTGCTCCCAGCAGACCAGCAAGACTGTaGCAGTGTCTGTCCAGCCACTATGGGCCAGAGCCC +
Preference number: 6 (lower is better)
Translates to: QCLCAPSRPARL*QCLSSHYGPEP
Trigger: GGGCTCTGGCCCATAGTGGCTGGACAGACACTGGCACAGTCTTGCTGGTCTGCTGGGAGCACACAGACATTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 72 bp ACCAGCAAGACTGTGCCAGTGTCTGTCCAGCCACTATaGGCCAGAGCCCTGCCCGTGATGAGGCTTTTCCCA +
Preference number: 6 (lower is better)
Translates to: TSKTVPVSVQPL*ARALPVMRLFP
Trigger: TGGGAAAAGCCTCATCACGGGCAGGGCTCTGGCCCATAGTGGCTGGACAGACACTGGCACAGTCTTGCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS TCA 72 bp TGCGGCAACTCAGCATGTCCACCTCCAAGTTCTGACTaGGCCAAGGGGCCCTCCAAAAACGGAGCCTCCCTT +
Preference number: 6 (lower is better)
Translates to: CGNSACPPPSSD*AKGPSKNGASL
Trigger: AAGGGAGGCTCCGTTTTTGGAGGGCCCCTTGGCTCAGTCAGAACTTGGAGGTGGACATGCTGAGTTGCCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS GCA 72 bp AAAGATTGCCCACTCTTGGCGGCAAGTGCAGGTAGTTaGTGGCCTCCGACCATCTGCTTCGCCTGCTTCACC +
Preference number: 6 (lower is better)
Translates to: KDCPLLAASAGS*WPPTICFACFT
Trigger: GGTGAAGCAGGCGAAGCAGATGGTCGGAGGCCAGCAACTACCTGCACTTGCCGCCAAGAGTGGGCAATCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 72 bp CCTTGGGCTGGCAGCACCTATGGATTTATCCAGCCTTaGGTCAGCCGTCCCCAGAGGTCTTTCCAGTGGTTG +
Preference number: 6 (lower is better)
Translates to: PWAGSTYGFIQP*VSRPQRSFQWL
Trigger: CAACCACTGGAAAGACCTCTGGGGACGGCTGACCCAAGGCTGGATAAATCCATAGGTGCTGCCAGCCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CAA 72 bp GCAAGGATCTTTGACCCAGCAGCCAGGCAAAAGTCATaGGCGTGGTATGCCACAGGACAGCGGACACAGCGC +
Preference number: 6 (lower is better)
Translates to: ARIFDPAARQKS*AWYATGQRTQR
Trigger: GCGCTGTGTCCGCTGTCCTGTGGCATACCACGCCAATGACTTTTGCCTGGCTGCTGGGTCAAAGATCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CAA 72 bp GCCTTGGGCTGGCAGCACCTATGGATTTATCCAGCCTaGGGTCAGCCGTCCCCAGAGGTCTTTCCAGTGGTT +
Preference number: 6 (lower is better)
Translates to: ALGWQHLWIYPA*GQPSPEVFPVV
Trigger: AACCACTGGAAAGACCTCTGGGGACGGCTGACCCAAGGCTGGATAAATCCATAGGTGCTGCCAGCCCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CAA 90 bp TCCCGGGATCGTGTTCTACACCTTCCTCAACAGTCTCCTTGGGGCTaGTGGCCGTCCTGTGAGGCATTAGTTCTCCCTCTGAGCCTGGAA +
Preference number: 6 (lower is better)
Translates to: SRDRVLHLPQQSPWG*WPSCEALVLPLSLE
Trigger: TTCCAGGCTCAGAGGGAGAACTAATGCCTCACAGGACGGCCACAAGCCCCAAGGAGACTGTTGAGGAAGGTGTAGAACACGATCCCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS GCA 72 bp ACAAAAGGAGCTGGGGCACATCTCACAGAAGGAGGCTaGTTCCTTCCCGCAGATGTCACACTGATGCCACGG +
Preference number: 6 (lower is better)
Translates to: TKGAGAHLTEGG*FLPADVTLMPR
Trigger: CCGTGGCATCAGTGTGACATCTGCGGGAAGGAAGCAGCCTCCTTCTGTGAGATGTGCCCCAGCTCCTTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 72 bp CAAGGATCTTTGACCCAGCAGCCAGGCAAAAGTCATTaGCGTGGTATGCCACAGGACAGCGGACACAGCGCA +
Preference number: 6 (lower is better)
Translates to: QGSLTQQPGKSH*RGMPQDSGHSA
Trigger: TGCGCTGTGTCCGCTGTCCTGTGGCATACCACGCCAATGACTTTTGCCTGGCTGCTGGGTCAAAGATCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 72 bp GCACATACTCACGGATCTCCCCAGGTTCCAGAGGATTaGGCCCACAGGGGTCATGCTCAGTACAAGACAGAC +
Preference number: 6 (lower is better)
Translates to: AHTHGSPQVPED*AHRGHAQYKTD
Trigger: GTCTGTCTTGTACTGAGCATGACCCCTGTGGGCCCAATCCTCTGGAACCTGGGGAGATCCGTGAGTATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CAA 72 bp GGCACATACTCACGGATCTCCCCAGGTTCCAGAGGATaGGGCCCACAGGGGTCATGCTCAGTACAAGACAGA +
Preference number: 6 (lower is better)
Translates to: GTYSRISPGSRG*GPQGSCSVQDR
Trigger: TCTGTCTTGTACTGAGCATGACCCCTGTGGGCCCAATCCTCTGGAACCTGGGGAGATCCGTGAGTATGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS TCA 72 bp AGGATTGGGATTTGGTCCCTGACCCAGCGAGGTCTCTaGCCTTATCTAAAGGCTGGGGCCTGGAGTCAGTTC +
Preference number: 6 (lower is better)
Translates to: RIGIWSLTQRGL*PYLKAGAWSQF
Trigger: GAACTGACTCCAGGCCCCAGCCTTTAGATAAGGTCAGAGACCTCGCTGGGTCAGGGACCAAATCCCAATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS GCA 72 bp GAAAGAAGTCTGGCCTGGGTGAGTGATTTAACAGCTTaGCAGGGGTCCTCTGAAGGGGCTGCTGCTTTCCCA +
Preference number: 6 (lower is better)
Translates to: ERSLAWVSDLTA*QGSSEGAAAFP
Trigger: TGGGAAAGCAGCAGCCCCTTCAGAGGACCCCTGGCAAGCTGTTAAATCACTCACCCAGGCCAGACTTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 72 bp GTTCTACACCTTCCTCAACAGTCTCCTTGGGGCTTGTaGCCGTCCTGTGAGGCATTAGTTCTCCCTCTGAGC +
Preference number: 6 (lower is better)
Translates to: VLHLPQQSPWGL*PSCEALVLPLS
Trigger: GCTCAGAGGGAGAACTAATGCCTCACAGGACGGCCACAAGCCCCAAGGAGACTGTTGAGGAAGGTGTAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 72 bp ATCTTTGACCCAGCAGCCAGGCAAAAGTCATTGGCGTaGTATGCCACAGGACAGCGGACACAGCGCATCAAC +
Preference number: 6 (lower is better)
Translates to: IFDPAARQKSLA*YATGQRTQRIN
Trigger: GTTGATGCGCTGTGTCCGCTGTCCTGTGGCATACCACGCCAATGACTTTTGCCTGGCTGCTGGGTCAAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 72 bp ATTGAGACAGTCTGCGTGGTAAACTTTTGGGCAGCCTaGTTTCTTGCAGGAGACGAGCTGGCCAGCATCCCC +
Preference number: 6 (lower is better)
Translates to: IETVCVVNFWAA*FLAGDELASIP
Trigger: GGGGATGCTGGCCAGCTCGTCTCCTGCAAGAAACCAGGCTGCCCAAAAGTTTACCACGCAGACTGTCTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 72 bp TTCTCAGGAGGTGGGAGTCTCTGGGACAAAGAGGCATaGGGTTTGTCAGTAGGCCTGTCTGAAGTCTGGGGT +
Preference number: 6 (lower is better)
Translates to: FSGGGSLWDKEA*GLSVGLSEVWG
Trigger: ACCCCAGACTTCAGACAGGCCTACTGACAAACCCCATGCCTCTTTGTCCCAGAGACTCCCACCTCCTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CAA 72 bp GTCCCCACGACCAGGACTCCGGTAAGAGACCAGGTTTaGAGCAGTCATCAACCGCTGCTCCTTCGTCTTACT +
Preference number: 6 (lower is better)
Translates to: VPTTRTPVRDQV*SSHQPLLLRLT
Trigger: AGTAAGACGAAGGAGCAGCGGTTGATGACTGCTCAAAACCTGGTCTCTTACCGGAGTCCTGGTCGTGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CAA 72 bp CGTGTTCTACACCTTCCTCAACAGTCTCCTTGGGGCTaGTGGCCGTCCTGTGAGGCATTAGTTCTCCCTCTG +
Preference number: 6 (lower is better)
Translates to: RVLHLPQQSPWG*WPSCEALVLPL
Trigger: CAGAGGGAGAACTAATGCCTCACAGGACGGCCACAAGCCCCAAGGAGACTGTTGAGGAAGGTGTAGAACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CAA 72 bp TGGGGTTTGTCAGTAGGCCTGTCTGAAGTCTGGGGTTaGGGACTGCTAGTAATGAGCAGTCTGTCTGGCGGC +
Preference number: 6 (lower is better)
Translates to: WGLSVGLSEVWG*GLLVMSSLSGG
Trigger: GCCGCCAGACAGACTGCTCATTACTAGCAGTCCCAAACCCCAGACTTCAGACAGGCCTACTGACAAACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CAA 72 bp CCTTTCTCAACAGCTCTCGGCATATGCCCCAGACCTTaGCTGGCAGGCCATGAACTTGACTCCAACACTGGC +
Preference number: 6 (lower is better)
Translates to: PFSTALGICPRP*LAGHELDSNTG
Trigger: GCCAGTGTTGGAGTCAAGTTCATGGCCTGCCAGCAAAGGTCTGGGGCATATGCCGAGAGCTGTTGAGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CAA 90 bp AAAGAGGCATGGGGTTTGTCAGTAGGCCTGTCTGAAGTCTGGGGTTaGGGACTGCTAGTAATGAGCAGTCTGTCTGGCGGCGGAAGTCTC +
Preference number: 6 (lower is better)
Translates to: KEAWGLSVGLSEVWG*GLLVMSSLSGGGSL
Trigger: GAGACTTCCGCCGCCAGACAGACTGCTCATTACTAGCAGTCCCAAACCCCAGACTTCAGACAGGCCTACTGACAAACCCCATGCCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS TCA 72 bp AAGCCACTTGCTTGGCTTCCTAAGGCGTTTCTTCTCTaGCCGCACAGCTGTAGTTGCAGCTACTCAGGAGGG +
Preference number: 6 (lower is better)
Translates to: KPLAWLPKAFLL*PHSCSCSYSGG
Trigger: CCCTCCTGAGTAGCTGCAACTACAGCTGTGCGGTCAGAGAAGAAACGCCTTAGGAAGCCAAGCAAGTGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375350.3
CDS GCA 72 bp GGAGTTCTATGCTCTGGAAACTCATCCCGCCCCTCCTaGACAGGGTCACTAGGAAGTAAGACCCTAAAGGCA +
Preference number: 6 (lower is better)
Translates to: GVLCSGNSSRPS*TGSLGSKTLKA
Trigger: TGCCTTTAGGGTCTTACTTCCTAGTGACCCTGTGCAGGAGGGGCGGGATGAGTTTCCAGAGCATAGAACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS GCA 72 bp AGTGGTTCCTCAAGTATGCTTGCTGAAGGAGTTCTATaGTCTGGAAACTCATCCCGCCCCTCCTGCACAGGG +
Preference number: 6 (lower is better)
Translates to: SGSSSMLAEGVL*SGNSSRPSCTG
Trigger: CCCTGTGCAGGAGGGGCGGGATGAGTTTCCAGAGCATAGAACTCCTTCAGCAAGCATACTTGAGGAACCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS GCA 72 bp ATGTCCCATCCACTCCTTTGCCCATCTTATCCTTGCTaGTCACGTCACCCTCCATGTAAGGGAAGACTCGGG +
Preference number: 6 (lower is better)
Translates to: MSHPLLCPSYPC*SRHPPCKGRLG
Trigger: CCCGAGTCTTCCCTTACATGGAGGGTGACGTGAGCAGCAAGGATAAGATGGGCAAAGGAGTGGATGGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
ENST00000503056.5
ENST00000515735.1
CDS GCA 72 bp CTTTCTCAACAGCTCTCGGCATATGCCCCAGACCTTTaGTGGCAGGCCATGAACTTGACTCCAACACTGGCA +
Preference number: 6 (lower is better)
Translates to: LSQQLSAYAPDL*WQAMNLTPTLA
Trigger: TGCCAGTGTTGGAGTCAAGTTCATGGCCTGCCAGCAAAGGTCTGGGGCATATGCCGAGAGCTGTTGAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS GCA 72 bp TCTGACACACAGCCTTTCTCAACAGCTCTCGGCATATaGCCCAGACCTTTGCTGGCAGGCCATGAACTTGAC +
Preference number: 6 (lower is better)
Translates to: SDTQPFSTALGI*PRPLLAGHELD
Trigger: GTCAAGTTCATGGCCTGCCAGCAAAGGTCTGGGGCATATGCCGAGAGCTGTTGAGAAAGGCTGTGTGTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 72 bp CTTGGTCAGATTGAGACAGTCTGCGTGGTAAACTTTTaGGCAGCCTGGTTTCTTGCAGGAGACGAGCTGGCC +
Preference number: 6 (lower is better)
Translates to: LGQIETVCVVNF*AAWFLAGDELA
Trigger: GGCCAGCTCGTCTCCTGCAAGAAACCAGGCTGCCCAAAAGTTTACCACGCAGACTGTCTCAATCTGACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 72 bp CCTGACCCAGCGAGGTCTCTGACCTTATCTAAAGGCTaGGGCCTGGAGTCAGTTCTCTCAAGAGGTCTTTCA +
Preference number: 6 (lower is better)
Translates to: PDPARSLTLSKG*GLESVLSRGLS
Trigger: TGAAAGACCTCTTGAGAGAACTGACTCCAGGCCCCAGCCTTTAGATAAGGTCAGAGACCTCGCTGGGTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 72 bp TCTCAACAGCTCTCGGCATATGCCCCAGACCTTTGCTaGCAGGCCATGAACTTGACTCCAACACTGGCATCT +
Preference number: 6 (lower is better)
Translates to: SQQLSAYAPDLC*QAMNLTPTLAS
Trigger: AGATGCCAGTGTTGGAGTCAAGTTCATGGCCTGCCAGCAAAGGTCTGGGGCATATGCCGAGAGCTGTTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 72 bp GAGCAAGACTCCACCTGGTTCAGGGAGCTCAGCCTGTaGTGTCAAACTGGGAATTCCTGGCTCCTTTTCCAT +
Preference number: 6 (lower is better)
Translates to: EQDSTWFRELSL*CQTGNSWLLFH
Trigger: ATGGAAAAGGAGCCAGGAATTCCCAGTTTGACACCACAGGCTGAGCTCCCTGAACCAGGTGGAGTCTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375350.3
CDS CAA 90 bp CTATTAGATGCAAGGATCTTTGACCCAGCAGCCAGGCAAAAGTCATaGGCGTGGTATGCCACAGGACAGCGGACACAGCGCATCAACCGA +
Preference number: 6 (lower is better)
Translates to: LLDARIFDPAARQKS*AWYATGQRTQRINR
Trigger: TCGGTTGATGCGCTGTGTCCGCTGTCCTGTGGCATACCACGCCAATGACTTTTGCCTGGCTGCTGGGTCAAAGATCCTTGCATCTAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CAA 90 bp GACACACAGCCTTTCTCAACAGCTCTCGGCATATGCCCCAGACCTTaGCTGGCAGGCCATGAACTTGACTCCAACACTGGCATCTTCTCA +
Preference number: 6 (lower is better)
Translates to: DTQPFSTALGICPRP*LAGHELDSNTGIFS
Trigger: TGAGAAGATGCCAGTGTTGGAGTCAAGTTCATGGCCTGCCAGCAAAGGTCTGGGGCATATGCCGAGAGCTGTTGAGAAAGGCTGTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS TCA 72 bp GAGTCACCCCCACTAGGGCTAGGATTGGCGGAGTTCTaGGTGCCATCTCCCTTTTTCTCTGAATTGTGTGTG +
Preference number: 6 (lower is better)
Translates to: ESPPLGLGLAEF*VPSPFFSELCV
Trigger: CACACACAATTCAGAGAAAAAGGGAGATGGCACTCAGAACTCCGCCAATCCTAGCCCTAGTGGGGGTGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS TCA 72 bp GGACAAAGAGGCATGGGGTTTGTCAGTAGGCCTGTCTaGAGTCTGGGGTTTGGGACTGCTAGTAATGAGCAG +
Preference number: 6 (lower is better)
Translates to: GQRGMGFVSRPV*SLGFGTASNEQ
Trigger: CTGCTCATTACTAGCAGTCCCAAACCCCAGACTTCAGACAGGCCTACTGACAAACCCCATGCCTCTTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS GCA 72 bp ATACAGATGTGGAGGGAGCACCGGAAGCCCTTGTTCTaGATAACAGTGGGTGGGTACTTCTGGACACACTCT +
Preference number: 6 (lower is better)
Translates to: IQMWREHRKPLF*ITVGGYFWTHS
Trigger: AGAGTGTGTCCAGAAGTACCCACCCACTGTTATGCAGAACAAGGGCTTCCGGTGCTCCCTCCACATCTGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 72 bp AAAGCATCCCTTCTCGATGCTGCTTACAAAAGGAGCTaGGGCACATCTCACAGAAGGAGGCTGCTTCCTTCC +
Preference number: 6 (lower is better)
Translates to: KASLLDAAYKRS*GTSHRRRLLPS
Trigger: GGAAGGAAGCAGCCTCCTTCTGTGAGATGTGCCCCAGCTCCTTTTGTAAGCAGCATCGAGAAGGGATGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 72 bp GAGGCATGGGGTTTGTCAGTAGGCCTGTCTGAAGTCTaGGGTTTGGGACTGCTAGTAATGAGCAGTCTGTCT +
Preference number: 6 (lower is better)
Translates to: EAWGLSVGLSEV*GLGLLVMSSLS
Trigger: AGACAGACTGCTCATTACTAGCAGTCCCAAACCCCAGACTTCAGACAGGCCTACTGACAAACCCCATGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CAA 72 bp CAGGTTATACAGATGTGGAGGGAGCACCGGAAGCCCTaGTTCTGCATAACAGTGGGTGGGTACTTCTGGACA +
Preference number: 6 (lower is better)
Translates to: QVIQMWREHRKP*FCITVGGYFWT
Trigger: TGTCCAGAAGTACCCACCCACTGTTATGCAGAACAAGGGCTTCCGGTGCTCCCTCCACATCTGTATAACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CAA 90 bp AGTAGAACAGTCCCCACGACCAGGACTCCGGTAAGAGACCAGGTTTaGAGCAGTCATCAACCGCTGCTCCTTCGTCTTACTATCATGCAT +
Preference number: 6 (lower is better)
Translates to: SRTVPTTRTPVRDQV*SSHQPLLLRLTIMH
Trigger: ATGCATGATAGTAAGACGAAGGAGCAGCGGTTGATGACTGCTCAAAACCTGGTCTCTTACCGGAGTCCTGGTCGTGGGGACTGTTCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CAA 90 bp GTAACACAGTCTGAACGACTTTTACCAGAAGCAGGGAGGTCTCTCTaGTCGGACAGTAAGCCAGGTAGGGAAGCAGACAACTCGCCAGAT +
Preference number: 6 (lower is better)
Translates to: VTQSERLLPEAGRSL*SDSKPGREADNSPD
Trigger: ATCTGGCGAGTTGTCTGCTTCCCTACCTGGCTTACTGTCCGACAAGAGAGACCTCCCTGCTTCTGGTAAAAGTCGTTCAGACTGTGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CAA 90 bp AAGAGGACTGGGAACTCTCCCACATCATGTCTCATCTTATCAATGTaGGAAGGAACAGCTCGAGGATGGCAGATCTCAGCTGGCCACCAC +
Preference number: 6 (lower is better)
Translates to: KRTGNSPTSCLILSM*EGTARGWQISAGHH
Trigger: GTGGTGGCCAGCTGAGATCTGCCATCCTCGAGCTGTTCCTTCCAACATTGATAAGATGAGACATGATGTGGGAGAGTTCCCAGTCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
ENST00000503056.5
ENST00000508029.5
ENST00000515735.1
CDS TCA 72 bp AATCCAAGGCACTCCAGGTGGAAAGCCCCACAGCACTaGGCCTCACATAACAGCAGCTCACCCAATTTTTCA +
Preference number: 6 (lower is better)
Translates to: NPRHSRWKAPQH*ASHNSSSPNFS
Trigger: TGAAAAATTGGGTGAGCTGCTGTTATGTGAGGCTCAGTGCTGTGGGGCTTTCCACCTGGAGTGCCTTGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS GCA 72 bp TTTCCCTGCTGGTCGCTTGGTCAGATTGAGACAGTCTaGGTGGTAAACTTTTGGGCAGCCTGGTTTCTTGCA +
Preference number: 6 (lower is better)
Translates to: FPCWSLGQIETV*VVNFWAAWFLA
Trigger: TGCAAGAAACCAGGCTGCCCAAAAGTTTACCACGCAGACTGTCTCAATCTGACCAAGCGACCAGCAGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 72 bp TGCACACTTGTGACTGGAAGGAGCCTGGTTAAGAGCTaGAAGTGTATTTTGCTCTGGTTTGGGGTCTTGCCC +
Preference number: 6 (lower is better)
Translates to: CTLVTGRSLVKS*KCILLWFGVLP
Trigger: GGGCAAGACCCCAAACCAGAGCAAAATACACTTCCAGCTCTTAACCAGGCTCCTTCCAGTCACAAGTGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CAA 72 bp TCTGAACGACTTTTACCAGAAGCAGGGAGGTCTCTCTaGTCGGACAGTAAGCCAGGTAGGGAAGCAGACAAC +
Preference number: 6 (lower is better)
Translates to: SERLLPEAGRSL*SDSKPGREADN
Trigger: GTTGTCTGCTTCCCTACCTGGCTTACTGTCCGACAAGAGAGACCTCCCTGCTTCTGGTAAAAGTCGTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CAA 72 bp GCCTGGTTAAGAGCTGGAAGTGTATTTTGCTCTGGTTaGGGGTCTTGCCCTCTTCCAAGAGACCAGCAAGTC +
Preference number: 6 (lower is better)
Translates to: AWLRAGSVFCSG*GSCPLPRDQQV
Trigger: GACTTGCTGGTCTCTTGGAAGAGGGCAAGACCCCAAACCAGAGCAAAATACACTTCCAGCTCTTAACCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CAA 90 bp AGCAGTCAGCATGATTTTGCTCTGTCAGTGGTTCCTCAAGTATGCTaGCTGAAGGAGTTCTATGCTCTGGAAACTCATCCCGCCCCTCCT +
Preference number: 6 (lower is better)
Translates to: SSQHDFALSVVPQVC*LKEFYALETHPAPP
Trigger: AGGAGGGGCGGGATGAGTTTCCAGAGCATAGAACTCCTTCAGCAAGCATACTTGAGGAACCACTGACAGAGCAAAATCATGCTGACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CAA 90 bp ACACTTGTGACTGGAAGGAGCCTGGTTAAGAGCTGGAAGTGTATTTaGCTCTGGTTTGGGGTCTTGCCCTCTTCCAAGAGACCAGCAAGT +
Preference number: 6 (lower is better)
Translates to: TLVTGRSLVKSWKCI*LWFGVLPSSKRPAS
Trigger: ACTTGCTGGTCTCTTGGAAGAGGGCAAGACCCCAAACCAGAGCAAAATACACTTCCAGCTCTTAACCAGGCTCCTTCCAGTCACAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS GCA 72 bp TATATGTCCCATCCACTCCTTTGCCCATCTTATCCTTaGTGCTCACGTCACCCTCCATGTAAGGGAAGACTC +
Preference number: 6 (lower is better)
Translates to: YMSHPLLCPSYP*CSRHPPCKGRL
Trigger: GAGTCTTCCCTTACATGGAGGGTGACGTGAGCAGCAAGGATAAGATGGGCAAAGGAGTGGATGGGACATATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
ENST00000503056.5
ENST00000515735.1
CDS GCA 72 bp TGGGTTGATTCTTTGGCCTTACACCCAAGAAGCCACTaGAGTTCGGGGCTCCACATTTGCAAACAGTCTTTC +
Preference number: 6 (lower is better)
Translates to: WVDSLALHPRSH*SSGLHICKQSF
Trigger: GAAAGACTGTTTGCAAATGTGGAGCCCCGAACTGCAGTGGCTTCTTGGGTGTAAGGCCAAAGAATCAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
ENST00000513736.1
CDS CCA 72 bp CTTGGCTGCAGCATGCCTCTGTCGTTTTCGCTTCCTTaGCTTGTCAAATATCTTGGTAGTGCCTCCACCAAA +
Preference number: 6 (lower is better)
Translates to: LGCSMPLSFSLP*LVKYLGSASTK
Trigger: TTTGGTGGAGGCACTACCAAGATATTTGACAAGCCAAGGAAGCGAAAACGACAGAGGCATGCTGCAGCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 72 bp GGAGCACCGGAAGCCCTTGTTCTGCATAACAGTGGGTaGGTACTTCTGGACACACTCTTCATGGTAAAACTT +
Preference number: 6 (lower is better)
Translates to: GAPEALVLHNSG*VLLDTLFMVKL
Trigger: AAGTTTTACCATGAAGAGTGTGTCCAGAAGTACCCACCCACTGTTATGCAGAACAAGGGCTTCCGGTGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 72 bp ACAGGCCTCAGTGCTTTTTCTTTAGCTACAAGGGTCTaGACCACAGCTGATAGTACTTTCTCAGGAGGTGGG +
Preference number: 6 (lower is better)
Translates to: TGLSAFSLATRV*TTADSTFSGGG
Trigger: CCCACCTCCTGAGAAAGTACTATCAGCTGTGGTCCAGACCCTTGTAGCTAAAGAAAAAGCACTGAGGCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CAA 72 bp CTCGGTCTCCCTGCAGTACAGCATCAAGAGTCACACTaGGAAGCTGATTCAGTTTTCTTTTGCGCTCGGTCT +
Preference number: 6 (lower is better)
Translates to: LGLPAVQHQESH*EADSVFFCARS
Trigger: AGACCGAGCGCAAAAGAAAACTGAATCAGCTTCCAAGTGTGACTCTTGATGCTGTACTGCAGGGAGACCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CAA 72 bp ACTGGAAGGAGCCTGGTTAAGAGCTGGAAGTGTATTTaGCTCTGGTTTGGGGTCTTGCCCTCTTCCAAGAGA +
Preference number: 6 (lower is better)
Translates to: TGRSLVKSWKCI*LWFGVLPSSKR
Trigger: TCTCTTGGAAGAGGGCAAGACCCCAAACCAGAGCAAAATACACTTCCAGCTCTTAACCAGGCTCCTTCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CAA 90 bp CCGAAAGGGCTGTCCTTGTCTTCAGGGGCATCTAAATTCACTGGATaGGAAAAGGGCAGCAGACAATTTCTTCTGGGTAGTTCACAGGTC +
Preference number: 6 (lower is better)
Translates to: PKGLSLSSGASKFTG*EKGSRQFLLGSSQV
Trigger: GACCTGTGAACTACCCAGAAGAAATTGTCTGCTGCCCTTTTCCAATCCAGTGAATTTAGATGCCCCTGAAGACAAGGACAGCCCTTTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
ENST00000508896.5
ENST00000510954.5
ENST00000511258.5
ENST00000512992.1
ENST00000602285.1
CDS CAA 90 bp CTCCACGTTCTCGGTCTCCCTGCAGTACAGCATCAAGAGTCACACTaGGAAGCTGATTCAGTTTTCTTTTGCGCTCGGTCTTTAAGGCTT +
Preference number: 6 (lower is better)
Translates to: LHVLGLPAVQHQESH*EADSVFFCARSLRL
Trigger: AAGCCTTAAAGACCGAGCGCAAAAGAAAACTGAATCAGCTTCCAAGTGTGACTCTTGATGCTGTACTGCAGGGAGACCGAGAACGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS TCA 72 bp CACCCAATTTTTCACAATTCTGACAGACATTCTCCTTaGGTGCAGCTCCTCCACCGCGTTCACCCTGCATTT +
Preference number: 6 (lower is better)
Translates to: HPIFHNSDRHSP*VQLLHRVHPAF
Trigger: AAATGCAGGGTGAACGCGGTGGAGGAGCTGCACTCAAGGAGAATGTCTGTCAGAATTGTGAAAAATTGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS TCA 72 bp CCTTTAGATGCAGAAACATTGGCTGGATTAGCAGCATaGCAGGTTATACAGATGTGGAGGGAGCACCGGAAG +
Preference number: 6 (lower is better)
Translates to: PLDAETLAGLAA*QVIQMWREHRK
Trigger: CTTCCGGTGCTCCCTCCACATCTGTATAACCTGTCATGCTGCTAATCCAGCCAATGTTTCTGCATCTAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS TCA 72 bp TTTCAGTCTGAGGAGCTAATGGCAAGAATGGCGATTTaGCTGCACCGTGTCTACTCTCTGGTGTGCTGTCTT +
Preference number: 6 (lower is better)
Translates to: FQSEELMARMAI*LHRVYSLVCCL
Trigger: AAGACAGCACACCAGAGAGTAGACACGGTGCAGTCAAATCGCCATTCTTGCCATTAGCTCCTCAGACTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439151.7
ENST00000602285.1
CDS CCA 72 bp TCGGTCTCCCTGCAGTACAGCATCAAGAGTCACACTTaGAAGCTGATTCAGTTTTCTTTTGCGCTCGGTCTT +
Preference number: 6 (lower is better)
Translates to: SVSLQYSIKSHT*KLIQFSFALGL
Trigger: AAGACCGAGCGCAAAAGAAAACTGAATCAGCTTCCAAGTGTGACTCTTGATGCTGTACTGCAGGGAGACCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 72 bp AATCTGTTCATGCGCTTACGAGGTTTAGTGCGCCTTTaGTTTAAACGCTGCCACCGCTTTTTAGGCACCACT +
Preference number: 6 (lower is better)
Translates to: NLFMRLRGLVRL*FKRCHRFLGTT
Trigger: AGTGGTGCCTAAAAAGCGGTGGCAGCGTTTAAACCAAAGGCGCACTAAACCTCGTAAGCGCATGAACAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 72 bp TTCCTGGCTCCTTTTCCATGTCACCAATGCTGGCACTaGATTTATCACAAACATTTAACCGTGGCCCAGCTG +
Preference number: 6 (lower is better)
Translates to: FLAPFPCHQCWH*IYHKHLTVAQL
Trigger: CAGCTGGGCCACGGTTAAATGTTTGTGATAAATCCAGTGCCAGCATTGGTGACATGGAAAAGGAGCCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CAA 72 bp GGGAACTCTCCCACATCATGTCTCATCTTATCAATGTaGGAAGGAACAGCTCGAGGATGGCAGATCTCAGCT +
Preference number: 6 (lower is better)
Translates to: GNSPTSCLILSM*EGTARGWQISA
Trigger: AGCTGAGATCTGCCATCCTCGAGCTGTTCCTTCCAACATTGATAAGATGAGACATGATGTGGGAGAGTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
ENST00000503056.5
ENST00000504457.5
ENST00000508029.5
ENST00000515735.1
CDS CAA 72 bp TTTGACTGCACCGTGTCTACTCTCTGGTGTGCTGTCTaGTTCACTTCCCATGGCCACTTTTACACCATTCTC +
Preference number: 6 (lower is better)
Translates to: FDCTVSTLWCAV*FTSHGHFYTIL
Trigger: GAGAATGGTGTAAAAGTGGCCATGGGAAGTGAACAAGACAGCACACCAGAGAGTAGACACGGTGCAGTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439151.7
ENST00000602285.1
CDS CAA 90 bp GAAAAAGCATCTCGCAATTTGGATGAAGGCTTTGATCGTCCACAGTaGCGCCTAGTAACACAGTCTGAACGACTTTTACCAGAAGCAGGG +
Preference number: 6 (lower is better)
Translates to: EKASRNLDEGFDRPQ*RLVTQSERLLPEAG
Trigger: CCCTGCTTCTGGTAAAAGTCGTTCAGACTGTGTTACTAGGCGCAACTGTGGACGATCAAAGCCTTCATCCAAATTGCGAGATGCTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS TCA 72 bp ACAAGAGTAGATGCCTTCAGATCAGAGAGATTAACCTaGGACGTCTCGGTTCCAGGCTCTGCACTCTTAGTA +
Preference number: 6 (lower is better)
Translates to: TRVDAFRSERLT*DVSVPGSALLV
Trigger: TACTAAGAGTGCAGAGCCTGGAACCGAGACGTCTCAGGTTAATCTCTCTGATCTGAAGGCATCTACTCTTGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS TCA 72 bp CCCTGCAGTACAGCATCAAGAGTCACACTTGGAAGCTaGTTCAGTTTTCTTTTGCGCTCGGTCTTTAAGGCT +
Preference number: 6 (lower is better)
Translates to: PCSTASRVTLGS*FSFLLRSVFKA
Trigger: AGCCTTAAAGACCGAGCGCAAAAGAAAACTGAATCAGCTTCCAAGTGTGACTCTTGATGCTGTACTGCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS TCA 72 bp TGGTCACCATCTTCACTTGTTAAGTGGCCCATTATCTaGAGGGGATCCTCTTTACTAGGATCTTCTGCCCCA +
Preference number: 6 (lower is better)
Translates to: WSPSSLVKWPII*RGSSLLGSSAP
Trigger: TGGGGCAGAAGATCCTAGTAAAGAGGATCCCCTTCAGATAATGGGCCACTTAACAAGTGAAGATGGTGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS GCA 72 bp GGAGTTATTACAAGAGGGTTCCTGTTTCATAGCAAGTaGTGTAGGACCACCAGGACTCAAGGAAGTGCAAAC +
Preference number: 6 (lower is better)
Translates to: GVITRGFLFHSK*CRTTRTQGSAN
Trigger: GTTTGCACTTCCTTGAGTCCTGGTGGTCCTACAGCACTTGCTATGAAACAGGAACCCTCTTGTAATAACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439151.7
ENST00000602285.1
CDS CCA 72 bp TGGGAATTCCTGGCTCCTTTTCCATGTCACCAATGCTaGCACTGGATTTATCACAAACATTTAACCGTGGCC +
Preference number: 6 (lower is better)
Translates to: WEFLAPFPCHQC*HWIYHKHLTVA
Trigger: GGCCACGGTTAAATGTTTGTGATAAATCCAGTGCCAGCATTGGTGACATGGAAAAGGAGCCAGGAATTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 72 bp GCGCATCAACCGACCTTTAGATGCAGAAACATTGGCTaGATTAGCAGCATGACAGGTTATACAGATGTGGAG +
Preference number: 6 (lower is better)
Translates to: AHQPTFRCRNIG*ISSMTGYTDVE
Trigger: CTCCACATCTGTATAACCTGTCATGCTGCTAATCCAGCCAATGTTTCTGCATCTAAAGGTCGGTTGATGCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 72 bp AAACACTCATCTTCTCGCTCCTTTGTGATTTCACCCTaGGTCCTGCGCTTTCCCTGTTGCTTCTTCTTGAAT +
Preference number: 6 (lower is better)
Translates to: KHSSSRSFVISP*VLRFPCCFFLN
Trigger: ATTCAAGAAGAAGCAACAGGGAAAGCGCAGGACCCAGGGTGAAATCACAAAGGAGCGAGAAGATGAGTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
ENST00000513736.1
CDS CAA 90 bp CATTCAGAGTCTATCCCACAGGGGTTCTCATCAGTAGCTTTACAGTaGCAACGGGGTATTTCAGATAAGTCTGCAGTGAAGATCTGTACC +
Preference number: 6 (lower is better)
Translates to: HSESIPQGFSSVALQ*QRGISDKSAVKICT
Trigger: GGTACAGATCTTCACTGCAGACTTATCTGAAATACCCCGTTGCAACTGTAAAGCTACTGATGAGAACCCCTGTGGGATAGACTCTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS TCA 72 bp GATTGGTACTACTTCTGTTCTGATTCTGCACACTTGTaGCTGGAAGGAGCCTGGTTAAGAGCTGGAAGTGTA +
Preference number: 6 (lower is better)
Translates to: DWYYFCSDSAHL*LEGAWLRAGSV
Trigger: TACACTTCCAGCTCTTAACCAGGCTCCTTCCAGTCACAAGTGTGCAGAATCAGAACAGAAGTAGTACCAATC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS TCA 72 bp CTGATCCATCAGCAGACCCATTTAAATACTCTACATTaGTCATGGAGGCCAAATCCTGTAGTCTCCGCAGTG +
Preference number: 6 (lower is better)
Translates to: LIHQQTHLNTLH*SWRPNPVVSAV
Trigger: CACTGCGGAGACTACAGGATTTGGCCTCCATGATCAATGTAGAGTATTTAAATGGGTCTGCTGATGGATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439151.7
ENST00000512992.1
ENST00000602285.1
CDS CAA 72 bp CTGTCCTTGTCTTCAGGGGCATCTAAATTCACTGGATaGGAAAAGGGCAGCAGACAATTTCTTCTGGGTAGT +
Preference number: 6 (lower is better)
Translates to: LSLSSGASKFTG*EKGSRQFLLGS
Trigger: ACTACCCAGAAGAAATTGTCTGCTGCCCTTTTCCAATCCAGTGAATTTAGATGCCCCTGAAGACAAGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
ENST00000508896.5
ENST00000510954.5
ENST00000511258.5
ENST00000512992.1
ENST00000602285.1
CDS CAA 72 bp TCTCGCAATTTGGATGAAGGCTTTGATCGTCCACAGTaGCGCCTAGTAACACAGTCTGAACGACTTTTACCA +
Preference number: 6 (lower is better)
Translates to: SRNLDEGFDRPQ*RLVTQSERLLP
Trigger: TGGTAAAAGTCGTTCAGACTGTGTTACTAGGCGCAACTGTGGACGATCAAAGCCTTCATCCAAATTGCGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CAA 90 bp TTCACTGTGTTCTTTACCATTTGGGCTGAAAAAGCATCTCGCAATTaGGATGAAGGCTTTGATCGTCCACAGTTGCGCCTAGTAACACAG +
Preference number: 6 (lower is better)
Translates to: FTVFFTIWAEKASRN*DEGFDRPQLRLVTQ
Trigger: CTGTGTTACTAGGCGCAACTGTGGACGATCAAAGCCTTCATCCAAATTGCGAGATGCTTTTTCAGCCCAAATGGTAAAGAACACAGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS TCA 72 bp ACTTCATACTTCAGTGGCGTAGACTTTTTCTTAGGTTaGCACCAAGAAGTTGTCGAAGAGCTCAACGTCGAC +
Preference number: 6 (lower is better)
Translates to: TSYFSGVDFFLG*HQEVVEELNVD
Trigger: GTCGACGTTGAGCTCTTCGACAACTTCTTGGTGTCAACCTAAGAAAAAGTCTACGCCACTGAAGTATGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638627.2
CDS CCA 72 bp TGTCCTTGTCTTCAGGGGCATCTAAATTCACTGGATTaGAAAAGGGCAGCAGACAATTTCTTCTGGGTAGTT +
Preference number: 6 (lower is better)
Translates to: CPCLQGHLNSLD*KRAADNFFWVV
Trigger: AACTACCCAGAAGAAATTGTCTGCTGCCCTTTTCCAATCCAGTGAATTTAGATGCCCCTGAAGACAAGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
ENST00000508896.5
ENST00000510954.5
ENST00000511258.5
ENST00000512992.1
ENST00000602285.1
CDS CCA 72 bp CAGGTAATTCTAGCATGTTTCCTAATGTACTGGTACTaGAATCTGGATCATCCGAAAGGGCTGTCCTTGTCT +
Preference number: 6 (lower is better)
Translates to: QVILACFLMYWY*NLDHPKGLSLS
Trigger: AGACAAGGACAGCCCTTTCGGATGATCCAGATTCCAGTACCAGTACATTAGGAAACATGCTAGAATTACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000508896.5
ENST00000510954.5
ENST00000511258.5
ENST00000638627.2
ENST00000644863.1
CDS CCA 72 bp AAGTTCCAGGTAATTCTAGCATGTTTCCTAATGTACTaGTACTGGAATCTGGATCATCCGAAAGGGCTGTCC +
Preference number: 6 (lower is better)
Translates to: KFQVILACFLMY*YWNLDHPKGLS
Trigger: GGACAGCCCTTTCGGATGATCCAGATTCCAGTACCAGTACATTAGGAAACATGCTAGAATTACCTGGAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000508896.5
ENST00000510954.5
ENST00000511258.5
ENST00000638627.2
ENST00000644863.1
CDS CAA 72 bp TGGGCTGTTTGCTTTTCGAATGTAATAGAGCTTGATTaGCTGCCCCACCCTTTATTAACGAGTTCTCACTGG +
Preference number: 6 (lower is better)
Translates to: WAVCFSNVIELD*LPHPLLTSSHW
Trigger: CCAGTGAGAACTCGTTAATAAAGGGTGGGGCAGCAAATCAAGCTCTATTACATTCGAAAAGCAAACAGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CAA 72 bp TTCTTTACCATTTGGGCTGAAAAAGCATCTCGCAATTaGGATGAAGGCTTTGATCGTCCACAGTTGCGCCTA +
Preference number: 6 (lower is better)
Translates to: FFTIWAEKASRN*DEGFDRPQLRL
Trigger: TAGGCGCAACTGTGGACGATCAAAGCCTTCATCCAAATTGCGAGATGCTTTTTCAGCCCAAATGGTAAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CAA 72 bp CATAGTACACCCATTAAGTGGCTCAGAAAAATTGGATaGACCATTACCGAAAGGGCTGTCCTTGTCTTCAGG +
Preference number: 6 (lower is better)
Translates to: HSTPIKWLRKIG*TITERAVLVFR
Trigger: CCTGAAGACAAGGACAGCCCTTTCGGTAATGGTCAATCCAATTTTTCTGAGCCACTTAATGGGTGTACTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439151.7
ENST00000512992.1
ENST00000602285.1
CDS CAA 72 bp TCTGATCCATCAGCAGACCCATTTAAATACTCTACATaGATCATGGAGGCCAAATCCTGTAGTCTCCGCAGT +
Preference number: 6 (lower is better)
Translates to: SDPSADPFKYST*IMEAKSCSLRS
Trigger: ACTGCGGAGACTACAGGATTTGGCCTCCATGATCAATGTAGAGTATTTAAATGGGTCTGCTGATGGATCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439151.7
ENST00000512992.1
ENST00000602285.1
CDS CAA 90 bp TTCGGAACTTGGGCTGTTTGCTTTTCGAATGTAATAGAGCTTGATTaGCTGCCCCACCCTTTATTAACGAGTTCTCACTGGATATGCTTG +
Preference number: 6 (lower is better)
Translates to: FGTWAVCFSNVIELD*LPHPLLTSSHWICL
Trigger: CAAGCATATCCAGTGAGAACTCGTTAATAAAGGGTGGGGCAGCAAATCAAGCTCTATTACATTCGAAAAGCAAACAGCCCAAGTTCCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS TCA 72 bp GTAATGGTTTTGATGGCTTTGATGTTCCAGAGTCACTaGCATCCTCACCTAAGGATCTGTAAGAGAGTTCCT +
Preference number: 6 (lower is better)
Translates to: VMVLMALMFQSH*HPHLRICKRVP
Trigger: AGGAACTCTCTTACAGATCCTTAGGTGAGGATGTCAGTGACTCTGGAACATCAAAGCCATCAAAACCATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS TCA 72 bp TGGTTTAAACGCTGCCACCGCTTTTTAGGCACCACTTaGTTTACACCATTGAGTTCATCATTCTCACTGTTC +
Preference number: 6 (lower is better)
Translates to: WFKRCHRFLGTT*FTPLSSSFSLF
Trigger: GAACAGTGAGAATGATGAACTCAATGGTGTAAATCAAGTGGTGCCTAAAAAGCGGTGGCAGCGTTTAAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS TCA 72 bp TTGTTCACTTCCCATGGCCACTTTTACACCATTCTCTaGTTTAGTCTCATAATTGCAGGTGGCATTGGTCTG +
Preference number: 6 (lower is better)
Translates to: LFTSHGHFYTIL*FSLIIAGGIGL
Trigger: CAGACCAATGCCACCTGCAATTATGAGACTAAATCAGAGAATGGTGTAAAAGTGGCCATGGGAAGTGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439151.7
ENST00000602285.1
CDS CAA 72 bp AACTTCATACTTCAGTGGCGTAGACTTTTTCTTAGGTaGACACCAAGAAGTTGTCGAAGAGCTCAACGTCGA +
Preference number: 6 (lower is better)
Translates to: NFILQWRRLFLR*TPRSCRRAQRR
Trigger: TCGACGTTGAGCTCTTCGACAACTTCTTGGTGTCAACCTAAGAAAAAGTCTACGCCACTGAAGTATGAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638627.2
CDS CAA 90 bp GAGATCTCCAACTTCATACTTCAGTGGCGTAGACTTTTTCTTAGGTaGACACCAAGAAGTTGTCGAAGAGCTCAACGTCGACCATTAAAT +
Preference number: 6 (lower is better)
Translates to: EISNFILQWRRLFLR*TPRSCRRAQRRPLN
Trigger: ATTTAATGGTCGACGTTGAGCTCTTCGACAACTTCTTGGTGTCAACCTAAGAAAAAGTCTACGCCACTGAAGTATGAAGTTGGAGATCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638627.2
CDS GCA 72 bp TGTGTTTGCACTTTATACTTCGGAACTTGGGCTGTTTaGTTTTCGAATGTAATAGAGCTTGATTTGCTGCCC +
Preference number: 6 (lower is better)
Translates to: CVCTLYFGTWAV*FSNVIELDLLP
Trigger: GGGCAGCAAATCAAGCTCTATTACATTCGAAAAGCAAACAGCCCAAGTTCCGAAGTATAAAGTGCAAACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS TCA 72 bp GAGAGAGCATCATTTGTAAAATCTGACTGGGGTTTGTaGACAAGAGTAGATGCCTTCAGATCAGAGAGATTA +
Preference number: 6 (lower is better)
Translates to: ERASFVKSDWGL*TRVDAFRSERL
Trigger: TAATCTCTCTGATCTGAAGGCATCTACTCTTGTTCACAAACCCCAGTCAGATTTTACAAATGATGCTCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 72 bp AGAGCAGCATTTCAAACTGCACTCCTCATTTATAACTaGGGGTTCTGCCATAACTGGATTTTCTTTGTGTTT +
Preference number: 6 (lower is better)
Translates to: RAAFQTALLIYN*GFCHNWIFFVF
Trigger: AAACACAAAGAAAATCCAGTTATGGCAGAACCCCCAGTTATAAATGAGGAGTGCAGTTTGAAATGCTGCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CCA 72 bp TGCTTAACCTTGCTATCGAAATGCACATCAGAAAAATaGTCACCATCTTCACTTGTTAAGTGGCCCATTATC +
Preference number: 6 (lower is better)
Translates to: CLTLLSKCTSEK*SPSSLVKWPII
Trigger: GATAATGGGCCACTTAACAAGTGAAGATGGTGACCATTTTTCTGATGTGCATTTCGATAGCAAGGTTAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CAA 72 bp TTTATAACTGGGGGTTCTGCCATAACTGGATTTTCTTaGTGTTTGCACTTTATACTTCGGAACTTGGGCTGT +
Preference number: 6 (lower is better)
Translates to: FITGGSAITGFS*CLHFILRNLGC
Trigger: ACAGCCCAAGTTCCGAAGTATAAAGTGCAAACACAAAGAAAATCCAGTTATGGCAGAACCCCCAGTTATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS GCA 72 bp GCTGTTTCTATGTCACTTGAATCCCTGGTTTTCTCATaGATATTGTTCAGTAGTTTTAGACCATCCACTTTC +
Preference number: 6 (lower is better)
Translates to: AVSMSLESLVFS*ILFSSFRPSTF
Trigger: GAAAGTGGATGGTCTAAAACTACTGAACAATATGCATGAGAAAACCAGGGATTCAAGTGACATAGAAACAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS GCA 72 bp GAGAGTCCTTTTTCAGAAATTTTACCAGGATCAGATTaGTTAACCTTGCTATCGAAATGCACATCAGAAAAA +
Preference number: 6 (lower is better)
Translates to: ESPFSEILPGSD*LTLLSKCTSEK
Trigger: TTTTTCTGATGTGCATTTCGATAGCAAGGTTAAGCAATCTGATCCTGGTAAAATTTCTGAAAAAGGACTCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS GCA 72 bp ACATCTGCATCGTCCACACAAGTAAAATTCTCAAAGTaGAGAAAGCCATTCTTGATAGTCTTTGTTACTTTT +
Preference number: 6 (lower is better)
Translates to: TSASSTQVKFSK*RKPFLIVFVTF
Trigger: AAAAGTAACAAAGACTATCAAGAATGGCTTTCTGCACTTTGAGAATTTTACTTGTGTGGACGATGCAGATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439151.7
ENST00000602285.1
CDS CCA 72 bp AAGTTCCAGGTAATTCTAGCATGTTTCCTAATGTACTaGTACTGGAATCTGGATCATCCTGAAAAGATAAAT +
Preference number: 6 (lower is better)
Translates to: KFQVILACFLMY*YWNLDHPEKIN
Trigger: ATTTATCTTTTCAGGATGATCCAGATTCCAGTACCAGTACATTAGGAAACATGCTAGAATTACCTGGAACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439151.7
ENST00000602285.1
CDS CAA 72 bp ATTAACGAGTTCTCACTGGATATGCTTGATGACAGGTaGAATTTTGGAGAGAGAGCATCATTTGTAAAATCT +
Preference number: 6 (lower is better)
Translates to: INEFSLDMLDDR*NFGERASFVKS
Trigger: AGATTTTACAAATGATGCTCTCTCTCCAAAATTCAACCTGTCATCAAGCATATCCAGTGAGAACTCGTTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7
CDS CAA 72 bp AGAGAGTCCTTTTTCAGAAATTTTACCAGGATCAGATaGCTTAACCTTGCTATCGAAATGCACATCAGAAAA +
Preference number: 6 (lower is better)
Translates to: RESFFRNFTRIR*LNLAIEMHIRK
Trigger: TTTTCTGATGTGCATTTCGATAGCAAGGTTAAGCAATCTGATCCTGGTAAAATTTCTGAAAAAGGACTCTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347982.8
ENST00000354179.8
ENST00000439151.7