RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NRXN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000179915

Ensembl transcript IDs: ENST00000331040.9, ENST00000342183.9, ENST00000378262.7, ENST00000401669.7, ENST00000401710.5, ENST00000404971.5, ENST00000405472.7, ENST00000405581.3, ENST00000406316.6, ENST00000412315.5, ENST00000416262.6, ENST00000447773.2, ENST00000462791.2, ENST00000474354.1, ENST00000495871.2, ENST00000496792.3, ENST00000611589.4, ENST00000625320.2, ENST00000625672.2, ENST00000625891.2, ENST00000626192.1, ENST00000626249.2, ENST00000626899.1, ENST00000627198.2, ENST00000628364.2, ENST00000628515.2, ENST00000628761.1, ENST00000630431.1, ENST00000630543.2, ENST00000630656.1, ENST00000634412.1, ENST00000634431.1, ENST00000634764.1, ENST00000635126.1, ENST00000635264.1, ENST00000635310.1, ENST00000635519.1, ENST00000636066.1, ENST00000636104.1, ENST00000636298.1, ENST00000636345.1, ENST00000637151.1, ENST00000637207.1, ENST00000637368.1, ENST00000637511.1, ENST00000637679.1, ENST00000637889.1, ENST00000637906.1, ENST00000637975.1, ENST00000675235.1

Found 2771 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTaGAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGA +
Preference number: 1 (lower is better)
Translates to: PTTAPVAPGGKLLKV*RLSHSKGQSSLAIG
Trigger: TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR TCA 90 bp CTTTCTCCCTTTCAAGTGAGGACACAAAGAGAAGGTAGTGATCTATaGACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCC +
Preference number: 1 (lower is better)
Translates to: LSPFQVRTQREGSDL*TRKQNLTGHRLCQP
Trigger: GGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTCATAGATCACTACCTTCTCTTTGTGTCCTCACTTGAAAGGGAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
3UTR TCA 90 bp GTTGTTTCTCCTTTACAACAGCCCCATTGGACTGTGCTGAGTTACTaGTGTAGTTTCGACTCTCGTCCACATGGTATGAGCCTTCATCCC +
Preference number: 1 (lower is better)
Translates to: VVSPLQQPHWTVLSY*CSFDSRPHGMSLHP
Trigger: GGGATGAAGGCTCATACCATGTGGACGAGAGTCGAAACTACATCAGTAACTCAGCACAGTCCAATGGGGCTGTTGTAAAGGAGAAACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635519.1
ENST00000637906.1
3UTR TCA 90 bp TTCTTTAATCTCTTTGAGACAGCCCATAAAGTTGTTACTGACTGGTaGCCCTGGAAGGTCGGCTGTGCTGGGACTGCCTCCAACATAGAA +
Preference number: 1 (lower is better)
Translates to: FFNLFETAHKVVTDW*PWKVGCAGTASNIE
Trigger: TTCTATGTTGGAGGCAGTCCCAGCACAGCCGACCTTCCAGGGTCACCAGTCAGTAACAACTTTATGGGCTGTCTCAAAGAGATTAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626249.2
3UTR GCA 90 bp CAACAAGATGATGCACCCACAGCAGTACCATTTCAGTGGTGCACATaGTTAGACTTATGTCTCAATACAGAATGGCTAGGGCAGGTGTGC +
Preference number: 1 (lower is better)
Translates to: QQDDAPTAVPFQWCT*LDLCLNTEWLGQVC
Trigger: GCACACCTGCCCTAGCCATTCTGTATTGAGACATAAGTCTAAGCATGTGCACCACTGAAATGGTACTGCTGTGGGTGCATCATCTTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR GCA 90 bp TTGCTACTGTATGCACGTTTGGATCTTCCAGCATATCTGATGGATTaGTGTGGATTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG +
Preference number: 1 (lower is better)
Translates to: LLLYARLDLPAYLMD*CGFVCVCVCVCVCV
Trigger: CACACACACACACACACACACACACACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCATACAGTAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR GCA 90 bp AGCAGACAACAAGATGATGCACCCACAGCAGTACCATTTCAGTGGTaGACATGCTTAGACTTATGTCTCAATACAGAATGGCTAGGGCAG +
Preference number: 1 (lower is better)
Translates to: SRQQDDAPTAVPFQW*TCLDLCLNTEWLGQ
Trigger: CTGCCCTAGCCATTCTGTATTGAGACATAAGTCTAAGCATGTGCACCACTGAAATGGTACTGCTGTGGGTGCATCATCTTGTTGTCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR CCA 90 bp ACTGTATGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTaGATTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT +
Preference number: 1 (lower is better)
Translates to: TVCTFGSSSISDGLL*IRVCVCVCVCVCVC
Trigger: ACACACACACACACACACACACACACACACACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCATACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR CCA 90 bp AAGGCACTTCACCAACCAGTCTCACATTTCCCACTATGGCGATGTTaGCATCGTTTTCGGCTGCCATATTCAGAACTTTCAAGCCATTGT +
Preference number: 1 (lower is better)
Translates to: KALHQPVSHFPLWRC*HRFRLPYSELSSHC
Trigger: ACAATGGCTTGAAAGTTCTGAATATGGCAGCCGAAAACGATGCCAACATCGCCATAGTGGGAAATGTGAGACTGGTTGGTGAAGTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637906.1
3UTR CCA 90 bp CCTAGCAGACAACAAGATGATGCACCCACAGCAGTACCATTTCAGTaGTGCACATGCTTAGACTTATGTCTCAATACAGAATGGCTAGGG +
Preference number: 1 (lower is better)
Translates to: PSRQQDDAPTAVPFQ*CTCLDLCLNTEWLG
Trigger: CCCTAGCCATTCTGTATTGAGACATAAGTCTAAGCATGTGCACCACTGAAATGGTACTGCTGTGGGTGCATCATCTTGTTGTCTGCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR TCA 90 bp CTATGGCCTATGAGAAGAATGAGTAAACTCGTGTTTAATTCATTGTaGTTCTGCCAGCCCACAGCAGTGGTCTCTAACATGTCTCCAGCT +
Preference number: 1 (lower is better)
Translates to: LWPMRRMSKLVFNSL*FCQPTAVVSNMSPA
Trigger: AGCTGGAGACATGTTAGAGACCACTGCTGTGGGCTGGCAGAATCACAATGAATTAAACACGAGTTTACTCATTCTTCTCATAGGCCATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
3UTR CCA 90 bp GTAAACTCGTGTTTAATTCATTGTGATTCTGCCAGCCCACAGCAGTaGTCTCTAACATGTCTCCAGCTGACTTCGCCATTTTTGTCATGT +
Preference number: 1 (lower is better)
Translates to: VNSCLIHCDSASPQQ*SLTCLQLTSPFLSC
Trigger: ACATGACAAAAATGGCGAAGTCAGCTGGAGACATGTTAGAGACCACTGCTGTGGGCTGGCAGAATCACAATGAATTAAACACGAGTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
3UTR CCA 90 bp CCATTTCAGTGGTGCACATGCTTAGACTTATGTCTCAATACAGAATaGCTAGGGCAGGTGTGCTCCAGAGCTGAATATTTGAAGATCACA +
Preference number: 1 (lower is better)
Translates to: PFQWCTCLDLCLNTE*LGQVCSRAEYLKIT
Trigger: TGTGATCTTCAAATATTCAGCTCTGGAGCACACCTGCCCTAGCCATTCTGTATTGAGACATAAGTCTAAGCATGTGCACCACTGAAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR TCA 90 bp TCATCTGTCCCAACATTAAACTTAACTCCAATTTTTCCCTGGTGCTaGAGCCTCAGATGCATTGAGAGCCAGTGTACTTTGTCTTTGCTC +
Preference number: 1 (lower is better)
Translates to: SSVPTLNLTPIFPWC*SLRCIESQCTLSLL
Trigger: GAGCAAAGACAAAGTACACTGGCTCTCAATGCATCTGAGGCTTCAGCACCAGGGAAAAATTGGAGTTAAGTTTAATGTTGGGACAGATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637906.1
3UTR GCA 90 bp AATAAGCATTTCAGAGCATTTCGGGGGCACAAAGAGACCAGGAAATaGATAATAATTGCAGGAACAGGTTCTGAGGGGGAGATTAATGAG +
Preference number: 1 (lower is better)
Translates to: NKHFRAFRGHKETRK*IIIAGTGSEGEINE
Trigger: CTCATTAATCTCCCCCTCAGAACCTGTTCCTGCAATTATTATGCATTTCCTGGTCTCTTTGTGCCCCCGAAATGCTCTGAAATGCTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000626249.2
3UTR TCA 90 bp ACACATCACAAAGTGAGACCAGTGCTTACCTCGAGAGAAAGGACTTaGGAGGAGGATGAAGAAGGTTATCAAAAGGCATGTTCTTTTTAC +
Preference number: 1 (lower is better)
Translates to: THHKVRPVLTSRERT*EEDEEGYQKACSFY
Trigger: GTAAAAAGAACATGCCTTTTGATAACCTTCTTCATCCTCCTCTCAAGTCCTTTCTCTCGAGGTAAGCACTGGTCTCACTTTGTGATGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
3UTR CCA 90 bp TTCCTGCTAGATGACACAAACATAAAGGTGCAGAACTGTGAACTGTaGTCCCAATTCACCAGATTAACACTGAGAACACAGGAAAGAATA +
Preference number: 1 (lower is better)
Translates to: FLLDDTNIKVQNCEL*SQFTRLTLRTQERI
Trigger: TATTCTTTCCTGTGTTCTCAGTGTTAATCTGGTGAATTGGGACCACAGTTCACAGTTCTGCACCTTTATGTTTGTGTCATCTAGCAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR TCA 90 bp AGTGAGACCAGTGCTTACCTCGAGAGAAAGGACTTGAGAGGAGGATaGAGAAGGTTATCAAAAGGCATGTTCTTTTTACATGTGTTAATT +
Preference number: 1 (lower is better)
Translates to: SETSAYLERKDLRGG*RRLSKGMFFLHVLI
Trigger: AATTAACACATGTAAAAAGAACATGCCTTTTGATAACCTTCTTCATCCTCCTCTCAAGTCCTTTCTCTCGAGGTAAGCACTGGTCTCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
3UTR GCA 90 bp TTTGTGTTGGTTTTTGTGTTGTGCCTTGATGCTGTAGTACTCCTTTaGTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGTTC +
Preference number: 1 (lower is better)
Translates to: FVLVFVLCLDAVVLL*FMNACGHHCLLEMF
Trigger: GAACATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACACAAAAACCAACACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
3UTR GCA 90 bp ACATGCTTAGACTTATGTCTCAATACAGAATGGCTAGGGCAGGTGTaGTCCAGAGCTGAATATTTGAAGATCACATATTTACAGTTCCTA +
Preference number: 1 (lower is better)
Translates to: TCLDLCLNTEWLGQV*SRAEYLKITYLQFL
Trigger: TAGGAACTGTAAATATGTGATCTTCAAATATTCAGCTCTGGAGCACACCTGCCCTAGCCATTCTGTATTGAGACATAAGTCTAAGCATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR GCA 90 bp CAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTaGCCACATAATGGTTCTTATTCATGCAGCAGTATATCAGTGATA +
Preference number: 1 (lower is better)
Translates to: QPELRCRLTNFASIT*PHNGSYSCSSISVI
Trigger: TATCACTGATATACTGCTGCATGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR CCA 90 bp GAAGAATTAACTGTAAGACTTTTCTACAGGAAAATGCTTTCCAAGTaGTCTAAGGTAAATGGGCAAGATGTCCTCATAGAGTCTGAGCAT +
Preference number: 1 (lower is better)
Translates to: EELTVRLFYRKMLSK*SKVNGQDVLIESEH
Trigger: ATGCTCAGACTCTATGAGGACATCTTGCCCATTTACCTTAGACCACTTGGAAAGCATTTTCCTGTAGAAAAGTCTTACAGTTAATTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626249.2
3UTR TCA 90 bp CTCAATCAACTGCAAACTATGCAGGGAACCCTGATATGTTTGGTATaGAGATACTTGGGATTCAAGTCATTTTCTCTTTCTAACTCTGTT +
Preference number: 1 (lower is better)
Translates to: LNQLQTMQGTLICLV*RYLGFKSFSLSNSV
Trigger: AACAGAGTTAGAAAGAGAAAATGACTTGAATCCCAAGTATCTTCATACCAAACATATCAGGGTTCCCTGCATAGTTTGCAGTTGATTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR CCA 90 bp CAAACTAAAGAACATGATGAGAAATGCCCACTTAAGAGAACGCAGTaGATGAGATTTTGGCCTCAAGTAAAAATGTTTAGAAAGCACTCA +
Preference number: 1 (lower is better)
Translates to: QTKEHDEKCPLKRTQ*MRFWPQVKMFRKHS
Trigger: TGAGTGCTTTCTAAACATTTTTACTTGAGGCCAAAATCTCATCCACTGCGTTCTCTTAAGTGGGCATTTCTCATCATGTTCTTTAGTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR-3UTR CCA 90 bp CCCGGATCACTTCTGCTGAGCCTGGATACGGCTCTCTGCCGCCTGCTCGGGTTGTGGCCCTGGAAGGGCTaGCCCTGCTCTTTCCCGCCA +
Preference number: 2 (lower is better)
Translates to: PGSLLLSLDTALCRLLGLWPWKG*PCSFPP
Trigger: TGGCGGGAAAGAGCAGGGCCAGCCCTTCCAGGGCCA...CAACCCGAGCAGGCGGCAGAGAGCCGTATCCAGGCTCAGCAGAAGTGATCCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637906.1
3UTR-3UTR TCA 90 bp CCCGGATCACTTCTGCTGAGCCTGGATACGGCTCTCTGCCGCCTGCTCGGGTTGCCGGATCACTTCTGCTaGGCCTGGATACGGCTCTCT +
Preference number: 2 (lower is better)
Translates to: PGSLLLSLDTALCRLLGLPDHFC*AWIRLS
Trigger: AGAGAGCCGTATCCAGGCTCAGCAGAAGTGATCCGG...CAACCCGAGCAGGCGGCAGAGAGCCGTATCCAGGCTCAGCAGAAGTGATCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635519.1
ENST00000637906.1
3UTR-3UTR GCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACCTGGATACGGCTCTCTaGCGCCTGCTCGGGTTGGGT +
Preference number: 2 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHLDTAL*RLLGLG
Trigger: ACCCAACCCGAGCAGGCGGCAGAGAGCCGTATCCAG...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635519.1
3UTR-3UTR TCA 90 bp CCCGGATCACTTCTGCTGAGCCTGGATACGGCTCTCTGCCGCCTGCTCGGGTTGCAGAAAGGGGCTTTTTaGATGTGTTCCTACACAAGT +
Preference number: 2 (lower is better)
Translates to: PGSLLLSLDTALCRLLGLQKGAF*MCSYTS
Trigger: ACTTGTGTAGGAACACATTCAAAAAGCCCCTTTCTG...CAACCCGAGCAGGCGGCAGAGAGCCGTATCCAGGCTCAGCAGAAGTGATCCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635519.1
3UTR-3UTR TCA 90 bp CTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACGTTGGACACATCACAAAGTaGGACCAGTGCTTACCTCGA +
Preference number: 2 (lower is better)
Translates to: LDTDCVSPWSWTSQPPDVGHITK*DQCLPR
Trigger: TCGAGGTAAGCACTGGTCTCACTTTGTGATGTGTCC...AACGTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
3UTR-3UTR CCA 90 bp CTTCCCACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGGCCAGCCCACAGCAGTaGTCTCTAACATGTCTCCAG +
Preference number: 2 (lower is better)
Translates to: LPTVCGCELRGSSIARVEASPQQ*SLTCLQ
Trigger: CTGGAGACATGTTAGAGACCACTGCTGTGGGCTGGC...CTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGTGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
3UTR-3UTR CCA 90 bp TCATCTGTGGTCTGGCTAATGGGTTCTTTTGTCGGGGGCTTTCCTCTTCTGGCTTGTCCACCTGCAACGTaGCATTGCCACCACTCCTCG +
Preference number: 2 (lower is better)
Translates to: SSVVWLMGSFVGGFPLLACPPAT*HCHHSS
Trigger: CGAGGAGTGGTGGCAATGCCACGTTGCAGGTGGACA...AGCCAGAAGAGGAAAGCCCCCGACAAAAGAACCCATTAGCCAGACCACAGATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637906.1
3UTR-3UTR GCA 90 bp CTGCTGGGTTGTTTCTCCTTTACAACAGCCCCATTGGACTGTGCTGAGTTACTGGCAAGTTCCAACCACTaGTCCAGTTGCACCAGGCGG +
Preference number: 2 (lower is better)
Translates to: LLGCFSFTTAPLDCAELLASSNH*SSCTRR
Trigger: CCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGC...CAGTAACTCAGCACAGTCCAATGGGGCTGTTGTAAAGGAGAAACAACCCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635519.1
3UTR-3UTR TCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCCTCTGGCAATTGGACTaGCTTCTCAGGAAAGCGCTA +
Preference number: 2 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLLWQLD*LLRKAL
Trigger: TAGCGCTTTCCTGAGAAGTCAGTCCAATTGCCAGAG...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR TCA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCCGGATCACTTCTGCTaGGCCTGGATACGGCTCTCT +
Preference number: 2 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHPDHFC*AWIRLS
Trigger: AGAGAGCCGTATCCAGGCTCAGCAGAAGTGATCCGG...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635519.1
ENST00000637906.1
3UTR-3UTR TCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTCTCGTCCACATGGTATaGGCCTTCATCCCGGTTTCT +
Preference number: 2 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVLVHMV*AFIPVS
Trigger: AGAAACCGGGATGAAGGCTCATACCATGTGGACGAG...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635519.1
3UTR-3UTR TCA 90 bp GTTGGAGCTTTTCGCACTGCTGGGTTGTTTCTCCTTTACAACAGCCCCATTGGACTCGTCCACATGGTATaGGCCTTCATCCCGGTTTCT +
Preference number: 2 (lower is better)
Translates to: VGAFRTAGLFLLYNSPIGLVHMV*AFIPVS
Trigger: AGAAACCGGGATGAAGGCTCATACCATGTGGACGAG...TCCAATGGGGCTGTTGTAAAGGAGAAACAACCCAGCAGTGCGAAAAGCTCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635519.1
ENST00000637906.1
3UTR-3UTR TCA 90 bp GTGACCCTGGAAGGTCGGCTGTGCTGGGACTGCCTCCAACATAGAAAAAGTCATACTGATATTGTCACCTaGCGCAGATTCCTGGTGACT +
Preference number: 2 (lower is better)
Translates to: VTLEGRLCWDCLQHRKSHTDIVT*RRFLVT
Trigger: AGTCACCAGGAATCTGCGTCAGGTGACAATATCAGT...ATGACTTTTTCTATGTTGGAGGCAGTCCCAGCACAGCCGACCTTCCAGGGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626249.2
3UTR-3UTR GCA 90 bp TCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACAGCCTCCAATCAAAGTaGCAACATTCGCTGATAATT +
Preference number: 2 (lower is better)
Translates to: SLDTDCVSPWSWTSQPPDSLQSK*QHSLII
Trigger: AATTATCAGCGAATGTTGGCACTTTGATTGGAGGCT...GTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
3UTR-3UTR GCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAACGGCTCTCTGCCGCCTaGTCGGGTTGGGTTGGCTTA +
Preference number: 2 (lower is better)
Translates to: AVVLLCFMNACGHHCLLERLSAA*SGWVGL
Trigger: TAAGCCAACCCAACCCGAGCAGGCGGCAGAGAGCCG...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635519.1
3UTR-3UTR GCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTACTGGATACGGCTCTCTaGCGCCTGCTCGGGTTGGGT +
Preference number: 2 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLLDTAL*RLLGLG
Trigger: ACCCAACCCGAGCAGGCGGCAGAGAGCCGTATCCAG...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635519.1
ENST00000637906.1
3UTR-3UTR GCA 90 bp TCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACGTACCATTTCAGTGGTaGACATGCTTAGACTTATGT +
Preference number: 2 (lower is better)
Translates to: SLDTDCVSPWSWTSQPPDVPFQW*TCLDLC
Trigger: ACATAAGTCTAAGCATGTGCACCACTGAAATGGTAC...GTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR CAA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTaGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGG +
Preference number: 2 (lower is better)
Translates to: SNHCSSCTRRQTLKG*QVESLKRTVFSGNW
Trigger: CCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR TCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTCTCTGGCAATTGGACTaGCTTCTCAGGAAAGCGCTA +
Preference number: 2 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVLWQLD*LLRKAL
Trigger: TAGCGCTTTCCTGAGAAGTCAGTCCAATTGCCAGAG...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR TCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTCTCTGGCAATTGGACTaGCTTCTCAGGAAAGCGCTA +
Preference number: 2 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLLWQLD*LLRKAL
Trigger: TAGCGCTTTCCTGAGAAGTCAGTCCAATTGCCAGAG...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR TCA 90 bp TCATCTGTGGTCTGGCTAATGGGTTCTTTTGTCGGGGGCTTTCCTCTTCTGGCTATTTTTCCCTGGTGCTaGAGCCTCAGATGCATTGAG +
Preference number: 2 (lower is better)
Translates to: SSVVWLMGSFVGGFPLLAIFPWC*SLRCIE
Trigger: CTCAATGCATCTGAGGCTTCAGCACCAGGGAAAAAT...AGCCAGAAGAGGAAAGCCCCCGACAAAAGAACCCATTAGCCAGACCACAGATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000637906.1
3UTR-3UTR TCA 90 bp GCTGTGCTAGTAGCCAGGGTCGTGGTAGTCTCCATAATTGATGTGGACATCTCTCATGGCAGTGGCTGTTaGCTCAGTTGTCATAGAGGA +
Preference number: 2 (lower is better)
Translates to: AVLVARVVVVSIIDVDISHGSGC*LSCHRG
Trigger: TCCTCTATGACAACTGAGTCAACAGCCACTGCCATG...AGAGATGTCCACATCAATTATGGAGACTACCACGACCCTGGCTACTAGCACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637906.1
3UTR-3UTR TCA 90 bp AGGGAAATAAGCATTTCAGAGCATTTCGGGGGCACAAAGAGACCAGGAAATGCAGTTGTTACTGACTGGTaGCCCTGGAAGGTCGGCTGT +
Preference number: 2 (lower is better)
Translates to: REISISEHFGGTKRPGNAVVTDW*PWKVGC
Trigger: ACAGCCGACCTTCCAGGGTCACCAGTCAGTAACAAC...TGCATTTCCTGGTCTCTTTGTGCCCCCGAAATGCTCTGAAATGCTTATTTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626249.2
3UTR CAA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTaGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACT +
Preference number: 2 (lower is better)
Translates to: TAPVAPGGKLLKVCR*SHSKGQSSLAIGLT
Trigger: AGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR TCA 90 bp GAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGCAGCCTCCAGACGTTTaGGAAATAAGTTTCTGTTAC +
Preference number: 2 (lower is better)
Translates to: EPGSKISLDTDCVSPWSWQPPDV*EISFCY
Trigger: GTAACAGAAACTTATTTCTCAAACGTCTGGAGGCTG...CCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
3UTR-3UTR TCA 90 bp AGGGAAATAAGCATTTCAGAGCATTTCGGGGGCACAAAGAGACCAGGAAATGCAGCCGATTTCCCAGTGTaGAGCATCAGTCCATTCCTC +
Preference number: 2 (lower is better)
Translates to: REISISEHFGGTKRPGNAADFPV*SISPFL
Trigger: GAGGAATGGACTGATGCTTCACACTGGGAAATCGGC...TGCATTTCCTGGTCTCTTTGTGCCCCCGAAATGCTCTGAAATGCTTATTTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626249.2
3UTR-3UTR TCA 90 bp GTGACCCTGGAAGGTCGGCTGTGCTGGGACTGCCTCCAACATAGAAAAAGTCATTTTTCAGGGCAAGATTaGCATAATCAGCCGATTTCC +
Preference number: 2 (lower is better)
Translates to: VTLEGRLCWDCLQHRKSHFSGQD*HNQPIS
Trigger: GGAAATCGGCTGATTATGTCAATCTTGCCCTGAAAA...ATGACTTTTTCTATGTTGGAGGCAGTCCCAGCACAGCCGACCTTCCAGGGTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000626249.2
3UTR-3UTR GCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTAACCACTGCTCCAGTTaGACCAGGCGGCAAACTCTT +
Preference number: 2 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCNHCSS*TRRQTL
Trigger: AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTT...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCGTCTTCTCTGGCAATTaGACTGACTTCTCAGGAAAG +
Preference number: 2 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLVFSGN*TDFSGK
Trigger: CTTTCCTGAGAAGTCAGTCCAATTGCCAGAGAAGAC...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CCA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCGTCTTCTCTGGCAATTaGACTGACTTCTCAGGAAAG +
Preference number: 2 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCVFSGN*TDFSGK
Trigger: CTTTCCTGAGAAGTCAGTCCAATTGCCAGAGAAGAC...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CCA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTGCTCGGGTTGGGTTaGCTTAAAGGACCACTGAAA +
Preference number: 2 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTLLGLG*LKGPLK
Trigger: TTTCAGTGGTCCTTTAAGCCAACCCAACCCGAGCAG...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635519.1
3UTR-3UTR CCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCCGACTCTCGTCCACATaGTATGAGCCTTCATCCCGG +
Preference number: 2 (lower is better)
Translates to: SMKQITPFVINTLAQPSSRLSST*YEPSSR
Trigger: CCGGGATGAAGGCTCATACCATGTGGACGAGAGTCG...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635519.1
3UTR CAA 90 bp AGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTaGGACTTCCCAGCCTCCAGACGTTTGAGAAATAAGTTTCTGTTA +
Preference number: 2 (lower is better)
Translates to: RKQNLTGHRLCQPLV*DFPASRRLRNKFLL
Trigger: TAACAGAAACTTATTTCTCAAACGTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
3UTR CAA 90 bp GAAGGCACTTCACCAACCAGTCTCACATTTCCCACTATGGCGATGTaGGCATCGTTTTCGGCTGCCATATTCAGAACTTTCAAGCCATTG +
Preference number: 2 (lower is better)
Translates to: EGTSPTSLTFPTMAM*ASFSAAIFRTFKPL
Trigger: CAATGGCTTGAAAGTTCTGAATATGGCAGCCGAAAACGATGCCAACATCGCCATAGTGGGAAATGTGAGACTGGTTGGTGAAGTGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637906.1
3UTR-3UTR TCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTACTCCTTTGCTTTATaGATGCGTGCGGTCATCACT +
Preference number: 2 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVYSFAL*MRAVIT
Trigger: AGTGATGACCGCACGCATTCATAAAGCAAAGGAGTA...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR TCA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCTTTTGTGTTGTGCCTTaGTGCTGTAGTACTCCTTTG +
Preference number: 2 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCFCVVP*CCSTPL
Trigger: CAAAGGAGTACTACAGCATCAAGGCACAACACAAAA...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR TCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTTTTTGTGTTGTGCCTTaGTGCTGTAGTACTCCTTTG +
Preference number: 2 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVFCVVP*CCSTPL
Trigger: CAAAGGAGTACTACAGCATCAAGGCACAACACAAAA...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR TCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTTTTGTGTTGTGCCTTaGTGCTGTAGTACTCCTTTG +
Preference number: 2 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHFCVVP*CCSTPL
Trigger: CAAAGGAGTACTACAGCATCAAGGCACAACACAAAA...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR TCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTCTGGCAATTGGACTaGCTTCTCAGGAAAGCGCTA +
Preference number: 2 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSLWQLD*LLRKAL
Trigger: TAGCGCTTTCCTGAGAAGTCAGTCCAATTGCCAGAG...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR TCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCCAGAAAGGGGCTTTTTaGATGTGTTCCTACACAAGT +
Preference number: 2 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLQKGAF*MCSYTS
Trigger: ACTTGTGTAGGAACACATTCAAAAAGCCCCTTTCTG...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR TCA 90 bp ACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGGTAACAGTGTTTAATTCATTGTaGTTCTGCCAGCCCACAGCA +
Preference number: 2 (lower is better)
Translates to: TVCGCELRGSSIARVEVTVFNSL*FCQPTA
Trigger: TGCTGTGGGCTGGCAGAATCACAATGAATTAAACAC...TGTTACCTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
3UTR-3UTR TCA 90 bp GCTGTGCTAGTAGCCAGGGTCGTGGTAGTCTCCATAATTGATGTGGACATCTCTACTGTGCTGAGTTACTaGTGTAGTTTCGACTCTCGT +
Preference number: 2 (lower is better)
Translates to: AVLVARVVVVSIIDVDISTVLSY*CSFDSR
Trigger: ACGAGAGTCGAAACTACATCAGTAACTCAGCACAGT...AGAGATGTCCACATCAATTATGGAGACTACCACGACCCTGGCTACTAGCACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637906.1
3UTR-3UTR TCA 90 bp AGTTGTCATAGAGGAAGGCACTTCACCAACCAGTCTCACATTTCCCACTATGGCTGCCACCACTCCTCGTaGAACGAACTACATGGTATT +
Preference number: 2 (lower is better)
Translates to: SCHRGRHFTNQSHISHYGCHHSS*NELHGI
Trigger: AATACCATGTAGTTCGTTTCACGAGGAGTGGTGGCA...GCCATAGTGGGAAATGTGAGACTGGTTGGTGAAGTGCCTTCCTCTATGACAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637906.1
3UTR-3UTR TCA 90 bp GTGACCCTGGAAGGTCGGCTGTGCTGGGACTGCCTCCAACATAGAAAAAGTCATATCAGTCCATTCCTCTaGAGGGTTTTAAATGACAGA +
Preference number: 2 (lower is better)
Translates to: VTLEGRLCWDCLQHRKSHISPFL*RVLNDR
Trigger: TCTGTCATTTAAAACCCTTCAGAGGAATGGACTGAT...ATGACTTTTTCTATGTTGGAGGCAGTCCCAGCACAGCCGACCTTCCAGGGTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626249.2
3UTR-3UTR GCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTCCTTTGCTTTATGAATaGGTGCGGTCATCACTGTCT +
Preference number: 2 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLPLLYE*VRSSLS
Trigger: AGACAGTGATGACCGCACGCATTCATAAAGCAAAGG...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR GCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTCCTTTGCTTTATGAATaGGTGCGGTCATCACTGTCT +
Preference number: 2 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVPLLYE*VRSSLS
Trigger: AGACAGTGATGACCGCACGCATTCATAAAGCAAAGG...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR GCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTGCTGTAGTACTCCTTTaGTTTATGAATGCGTGCGGT +
Preference number: 2 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLAVVLL*FMNACG
Trigger: ACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR GCA 90 bp CTTCCCACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGAGCCTCCAATCAAAGTaGCAACATTCGCTGATAATT +
Preference number: 2 (lower is better)
Translates to: LPTVCGCELRGSSIARVESLQSK*QHSLII
Trigger: AATTATCAGCGAATGTTGGCACTTTGATTGGAGGCT...CTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGTGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
3UTR-3UTR CCA 90 bp CAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTATATGAACACTCTGTaGATGCCATGTCATAGTCAT +
Preference number: 2 (lower is better)
Translates to: QNLTGHRLCQPLVLDFPAYMNTL*MPCHSH
Trigger: ATGACTATGACATGGCATCCACAGAGTGTTCATATA...GGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
3UTR-3UTR CCA 90 bp CAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCCACATAAGACAGACTTaGATTGATGTTATGCTTTCC +
Preference number: 2 (lower is better)
Translates to: QNLTGHRLCQPLVLDFPAHIRQT*IDVMLS
Trigger: GGAAAGCATAACATCAATCCAAGTCTGTCTTATGTG...GGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
3UTR-3UTR CCA 90 bp CTTCCCACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGTTTGACTCTTTAAAATaGACAGTTGAAACCACCGCC +
Preference number: 2 (lower is better)
Translates to: LPTVCGCELRGSSIARVEFDSLK*TVETTA
Trigger: GGCGGTGGTTTCAACTGTCCATTTTAAAGAGTCAAA...CTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGTGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
3UTR-3UTR CCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAACGACTCTCGTCCACATaGTATGAGCCTTCATCCCGG +
Preference number: 2 (lower is better)
Translates to: AVVLLCFMNACGHHCLLERLSST*YEPSSR
Trigger: CCGGGATGAAGGCTCATACCATGTGGACGAGAGTCG...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635519.1
ENST00000637906.1
3UTR-3UTR CCA 90 bp GGCTTTCCTCTTCTGGCTGTGCTAGTAGCCAGGGTCGTGGTAGTCTCCATAATTAGCTTTTCGCACTGCTaGGTTGTTTCTCCTTTACAA +
Preference number: 2 (lower is better)
Translates to: GFPLLAVLVARVVVVSIISFSHC*VVSPLQ
Trigger: TTGTAAAGGAGAAACAACCCAGCAGTGCGAAAAGCT...AATTATGGAGACTACCACGACCCTGGCTACTAGCACAGCCAGAAGAGGAAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637906.1
3UTR-3UTR TCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTTACTCCTTTGCTTTATaGATGCGTGCGGTCATCACT +
Preference number: 2 (lower is better)
Translates to: GLTSQESASTLAKSRIIGYSFAL*MRAVIT
Trigger: AGTGATGACCGCACGCATTCATAAAGCAAAGGAGTA...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR TCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCCTCTGGCAATTGGACTaGCTTCTCAGGAAAGCGCTA +
Preference number: 2 (lower is better)
Translates to: SMKQITPFVINTLAQPSSLWQLD*LLRKAL
Trigger: TAGCGCTTTCCTGAGAAGTCAGTCCAATTGCCAGAG...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR TCA 90 bp ATGGCGATGTTGGCATCGTTTTCGGCTGCCATATTCAGAACTTTCAAGCCATTGAAGCCTCAGATGCATTaGGAGCCAGTGTACTTTGTC +
Preference number: 2 (lower is better)
Translates to: MAMLASFSAAIFRTFKPLKPQMH*EPVYFV
Trigger: GACAAAGTACACTGGCTCTCAATGCATCTGAGGCTT...CAATGGCTTGAAAGTTCTGAATATGGCAGCCGAAAACGATGCCAACATCGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637906.1
3UTR-3UTR GCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAACCTTTGCTTTATGAATaGGTGCGGTCATCACTGTCT +
Preference number: 2 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKPLLYE*VRSSLS
Trigger: AGACAGTGATGACCGCACGCATTCATAAAGCAAAGG...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR GCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTGCTGTAGTACTCCTTTaGTTTATGAATGCGTGCGGT +
Preference number: 2 (lower is better)
Translates to: GLTSQESASTLAKSRIIGAVVLL*FMNACG
Trigger: ACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR GCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAGCTGTAGTACTCCTTTaGTTTATGAATGCGTGCGGT +
Preference number: 2 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKAVVLL*FMNACG
Trigger: ACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR GCA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCTTGGTTTTTGTGTTGTaGCTTGATGCTGTAGTACTC +
Preference number: 2 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCLVFVL*LDAVVL
Trigger: GAGTACTACAGCATCAAGGCACAACACAAAAACCAA...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR GCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTTTGGTTTTTGTGTTGTaGCTTGATGCTGTAGTACTC +
Preference number: 2 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVLVFVL*LDAVVL
Trigger: GAGTACTACAGCATCAAGGCACAACACAAAAACCAA...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR GCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTTGGTTTTTGTGTTGTaGCTTGATGCTGTAGTACTC +
Preference number: 2 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHLVFVL*LDAVVL
Trigger: GAGTACTACAGCATCAAGGCACAACACAAAAACCAA...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR GCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGAAACCACTGCTCCAGTTaGACCAGGCGGCAAACTCTT +
Preference number: 2 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGNHCSS*TRRQTL
Trigger: AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTT...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR GCA 90 bp GCTGTGCTAGTAGCCAGGGTCGTGGTAGTCTCCATAATTGATGTGGACATCTCTGGCATCGTTTTCGGCTaGCATATTCAGAACTTTCAA +
Preference number: 2 (lower is better)
Translates to: AVLVARVVVVSIIDVDISGIVFG*HIQNFQ
Trigger: TTGAAAGTTCTGAATATGGCAGCCGAAAACGATGCC...AGAGATGTCCACATCAATTATGGAGACTACCACGACCCTGGCTACTAGCACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637906.1
3UTR CAA 90 bp TTTGCTACTGTATGCACGTTTGGATCTTCCAGCATATCTGATGGATaGCTGTGGATTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: FATVCTFGSSSISDG*LWIRVCVCVCVCVC
Trigger: ACACACACACACACACACACACACACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCATACAGTAGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR CAA 90 bp CCACAGCAGTGGTCTCTAACATGTCTCCAGCTGACTTCGCCATTTTaGTCATGTACACATGATAAGGGATTTTGCAGTTTCCAAACCCTG +
Preference number: 2 (lower is better)
Translates to: PQQWSLTCLQLTSPF*SCTHDKGFCSFQTL
Trigger: CAGGGTTTGGAAACTGCAAAATCCCTTATCATGTGTACATGACAAAAATGGCGAAGTCAGCTGGAGACATGTTAGAGACCACTGCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
3UTR-3UTR TCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTTTTTGTGTTGTGCCTTaGTGCTGTAGTACTCCTTTG +
Preference number: 2 (lower is better)
Translates to: GLTSQESASTLAKSRIIGFCVVP*CCSTPL
Trigger: CAAAGGAGTACTACAGCATCAAGGCACAACACAAAA...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR TCA 90 bp AGTTGTCATAGAGGAAGGCACTTCACCAACCAGTCTCACATTTCCCACTATGGCTTTTGTGTTGTGCCTTaGTGCTGTAGTACTCCTTTG +
Preference number: 2 (lower is better)
Translates to: SCHRGRHFTNQSHISHYGFCVVP*CCSTPL
Trigger: CAAAGGAGTACTACAGCATCAAGGCACAACACAAAA...GCCATAGTGGGAAATGTGAGACTGGTTGGTGAAGTGCCTTCCTCTATGACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637906.1
3UTR-3UTR TCA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCCTCTGGCAATTGGACTaGCTTCTCAGGAAAGCGCTA +
Preference number: 2 (lower is better)
Translates to: LQQPELRCRLTNFASITCLWQLD*LLRKAL
Trigger: TAGCGCTTTCCTGAGAAGTCAGTCCAATTGCCAGAG...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR TCA 90 bp ATATGCACCAAACACAGGCATTTCAACAGTAAGGGTCTGTCAACATTCACAAACTCCGAACCCACAAAATaGCGGATTAGGAGAGGGGGA +
Preference number: 2 (lower is better)
Translates to: ICTKHRHFNSKGLSTFTNSEPTK*RIRRGG
Trigger: TCCCCCTCTCCTAATCCGTCATTTTGTGGGTTCGGA...GTTTGTGAATGTTGACAGACCCTTACTGTTGAAATGCCTGTGTTTGGTGCATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
3UTR-3UTR GCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCACCTTTGCTTTATGAATaGGTGCGGTCATCACTGTCT +
Preference number: 2 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSPLLYE*VRSSLS
Trigger: AGACAGTGATGACCGCACGCATTCATAAAGCAAAGG...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR GCA 90 bp TCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACCCAGTTTATGGTGGTCTTCCCACGGTCTaGGGCTGTGAGTTAAGGGGA +
Preference number: 2 (lower is better)
Translates to: SRRLRNKFLLLTSYPVYGGLPTV*GCELRG
Trigger: TCCCCTTAACTCACAGCCGCAGACCGTGGGAAGACC...ACCATAAACTGGGTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
3UTR-3UTR GCA 90 bp TCTATGAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTTATGTTTGCCACAGCTaGATACCACTTACTTCCTTT +
Preference number: 2 (lower is better)
Translates to: SMNQEAKSHWTPTVSALGYVCHS*IPLTSF
Trigger: AAAGGAAGTAAGTGGTATGCAGCTGTGGCAAACATA...ACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTCATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR-3UTR CCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCGCCGCCTGCTCGGGTTaGGTTGGCTTAAAGGACCAC +
Preference number: 2 (lower is better)
Translates to: CNNIISVHENFPMIASMPAACSG*VGLKDH
Trigger: GTGGTCCTTTAAGCCAACCCAACCCGAGCAGGCGGC...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635519.1
3UTR-3UTR TCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCTACTCCTTTGCTTTATaGATGCGTGCGGTCATCACT +
Preference number: 2 (lower is better)
Translates to: SMKQITPFVINTLAQPSSYSFAL*MRAVIT
Trigger: AGTGATGACCGCACGCATTCATAAAGCAAAGGAGTA...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR TCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGCTCTGGCAATTGGACTaGCTTCTCAGGAAAGCGCTA +
Preference number: 2 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTELWQLD*LLRKAL
Trigger: TAGCGCTTTCCTGAGAAGTCAGTCCAATTGCCAGAG...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR TCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTCAGAAAGGGGCTTTTTaGATGTGTTCCTACACAAGT +
Preference number: 2 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCQKGAF*MCSYTS
Trigger: ACTTGTGTAGGAACACATTCAAAAAGCCCCTTTCTG...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR TCA 90 bp GTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACACAGGACGCAGTTTCCAAACCCTaGGTTGTTATGGAGCACAGA +
Preference number: 2 (lower is better)
Translates to: VTGSCALHRQIRYIATQDAVSKP*VVMEHR
Trigger: TCTGTGCTCCATAACAACTCAGGGTTTGGAAACTGC...GTCCTGTGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
3UTR-3UTR TCA 90 bp ACATGTCTCCAGCTGACTTCGCCATTTTTGTCATGTACACATGATAAGGGATTTAAGAGTACACATGCCTaGCTTACCAAGCAATGCGGG +
Preference number: 2 (lower is better)
Translates to: TCLQLTSPFLSCTHDKGFKSTHA*LTKQCG
Trigger: CCCGCATTGCTTGGTAAGTCAGGCATGTGTACTCTT...AAATCCCTTATCATGTGTACATGACAAAAATGGCGAAGTCAGCTGGAGACATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR-3UTR GCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGCTGTAGTACTCCTTTaGTTTATGAATGCGTGCGGT +
Preference number: 2 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTAVVLL*FMNACG
Trigger: ACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR GCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAACTCTTAAAGGTTTaGAGGTTGAGTCACTCAAAA +
Preference number: 2 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLKLLKV*RLSHSK
Trigger: TTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR GCA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCGCAAGTTCCAACCACTaGTCCAGTTGCACCAGGCGG +
Preference number: 2 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSIASSNH*SSCTRR
Trigger: CCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGC...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR GCA 90 bp ACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGTCTTAACAATTACAATGGTCTTCCCACGGTCTaGGGCTGTGAGTTAAGGGGA +
Preference number: 2 (lower is better)
Translates to: THQLVQVEELYPGLNNYNGLPTV*GCELRG
Trigger: TCCCCTTAACTCACAGCCGCAGACCGTGGGAAGACC...ATTGTAATTGTTAAGACCTGGATACAACTCTTCCACCTGAACTAATTGATGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
3UTR-3UTR GCA 90 bp ACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGGTAACATCATTTCTTACATATTaGCTGGCTCATGTTCAGATG +
Preference number: 2 (lower is better)
Translates to: TVCGCELRGSSIARVEVTSFLTY*LAHVQM
Trigger: CATCTGAACATGAGCCAGGCAATATGTAAGAAATGA...TGTTACCTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR-3UTR CCA 90 bp GATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACGCCAGCCCACAGCAGTaGTCTCTAACATGTCTCCAG +
Preference number: 2 (lower is better)
Translates to: DFSNWKLCTSQTNSLYSNASPQQ*SLTCLQ
Trigger: CTGGAGACATGTTAGAGACCACTGCTGTGGGCTGGC...GTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
3UTR-3UTR TCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGATACTCCTTTGCTTTATaGATGCGTGCGGTCATCACT +
Preference number: 2 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGYSFAL*MRAVIT
Trigger: AGTGATGACCGCACGCATTCATAAAGCAAAGGAGTA...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR TCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCTTTTGTGTTGTGCCTTaGTGCTGTAGTACTCCTTTG +
Preference number: 2 (lower is better)
Translates to: SMKQITPFVINTLAQPSSFCVVP*CCSTPL
Trigger: CAAAGGAGTACTACAGCATCAAGGCACAACACAAAA...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR TCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTTTTTGTGTTGTGCCTTaGTGCTGTAGTACTCCTTTG +
Preference number: 2 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTFCVVP*CCSTPL
Trigger: CAAAGGAGTACTACAGCATCAAGGCACAACACAAAA...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR TCA 90 bp GTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACACAGGACGTGTTTAATTCATTGTaGTTCTGCCAGCCCACAGCA +
Preference number: 2 (lower is better)
Translates to: VTGSCALHRQIRYIATQDVFNSL*FCQPTA
Trigger: TGCTGTGGGCTGGCAGAATCACAATGAATTAAACAC...GTCCTGTGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
3UTR-3UTR TCA 90 bp ATATGCACCAAACACAGGCATTTCAACAGTAAGGGTCTGTCAACATTCACAAACAGGGCAGAGCCTTTATaGATGGGATTGCTGTCCTTA +
Preference number: 2 (lower is better)
Translates to: ICTKHRHFNSKGLSTFTNRAEPL*MGLLSL
Trigger: TAAGGACAGCAATCCCATTCATAAAGGCTCTGCCCT...GTTTGTGAATGTTGACAGACCCTTACTGTTGAAATGCCTGTGTTTGGTGCATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
3UTR-3UTR GCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACCTTTGCTTTATGAATaGGTGCGGTCATCACTGTCT +
Preference number: 2 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGPLLYE*VRSSLS
Trigger: AGACAGTGATGACCGCACGCATTCATAAAGCAAAGG...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR GCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAGCTGTAGTACTCCTTTaGTTTATGAATGCGTGCGGT +
Preference number: 2 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAAVVLL*FMNACG
Trigger: ACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR GCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGAGCTGTAGTACTCCTTTaGTTTATGAATGCGTGCGGT +
Preference number: 2 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGAVVLL*FMNACG
Trigger: ACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR GCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCATTGGTTTTTGTGTTGTaGCTTGATGCTGTAGTACTC +
Preference number: 2 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSLVFVL*LDAVVL
Trigger: GAGTACTACAGCATCAAGGCACAACACAAAAACCAA...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR GCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTTTGGTTTTTGTGTTGTaGCTTGATGCTGTAGTACTC +
Preference number: 2 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSLVFVL*LDAVVL
Trigger: GAGTACTACAGCATCAAGGCACAACACAAAAACCAA...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR GCA 90 bp CTGCTGGGTTGTTTCTCCTTTACAACAGCCCCATTGGACTGTGCTGAGTTACTGAAACTCTTAAAGGTTTaGAGGTTGAGTCACTCAAAA +
Preference number: 2 (lower is better)
Translates to: LLGCFSFTTAPLDCAELLKLLKV*RLSHSK
Trigger: TTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT...CAGTAACTCAGCACAGTCCAATGGGGCTGTTGTAAAGGAGAAACAACCCAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635519.1
3UTR-3UTR GCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAATTTCCCAATGATTaGATCTATGCCCTCTTGTTT +
Preference number: 2 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLKFPND*IYALLF
Trigger: AAACAAGAGGGCATAGATGCAATCATTGGGAAATTT...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR GCA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCGCATATCTGATGGATTaGTGTGGATTCGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: LQQPELRCRLTNFASITCAYLMD*CGFVCV
Trigger: CACACACACGAATCCACAGCAATCCATCAGATATGC...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR GCA 90 bp GTTGACTCAGTTGTCATAGAGGAAGGCACTTCACCAACCAGTCTCACATTTCCCCCCATCATTAATGATTaGATTGGATTCTTCAATGGC +
Preference number: 2 (lower is better)
Translates to: VDSVVIEEGTSPTSLTFPPIIND*IGFFNG
Trigger: GCCATTGAAGAATCCAATGCAATCATTAATGATGGG...GGGAAATGTGAGACTGGTTGGTGAAGTGCCTTCCTCTATGACAACTGAGTCAAC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000637906.1
3UTR-3UTR GCA 90 bp GCTGTGCTAGTAGCCAGGGTCGTGGTAGTCTCCATAATTGATGTGGACATCTCTGCCAATTATTATGGTTaGTTGGCTATTGAAGATTGT +
Preference number: 2 (lower is better)
Translates to: AVLVARVVVVSIIDVDISANYYG*LAIEDC
Trigger: ACAATCTTCAATAGCCAAGCAACCATAATAATTGGC...AGAGATGTCCACATCAATTATGGAGACTACCACGACCCTGGCTACTAGCACAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637906.1
3UTR-3UTR CCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGAGTCTTCTCTGGCAATTaGACTGACTTCTCAGGAAAG +
Preference number: 2 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGVFSGN*TDFSGK
Trigger: CTTTCCTGAGAAGTCAGTCCAATTGCCAGAGAAGAC...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CCA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCTCTGATGGATTGCTGTaGATTCGTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: LQQPELRCRLTNFASITCSDGLL*IRVCVC
Trigger: ACACACACACACACGAATCCACAGCAATCCATCAGA...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTAGCTTTTCGCACTGCTaGGTTGTTTCTCCTTTACAA +
Preference number: 2 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTSFSHC*VVSPLQ
Trigger: TTGTAAAGGAGAAACAACCCAGCAGTGCGAAAAGCT...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635519.1
3UTR-3UTR CCA 90 bp TGCAGTTTCCAAACCCTGAGTTGTTATGGAGCACAGAAGGATCAACATCAACTCGCAGTACCATTTCAGTaGTGCACATGCTTAGACTTA +
Preference number: 2 (lower is better)
Translates to: CSFQTLSCYGAQKDQHQLAVPFQ*CTCLDL
Trigger: TAAGTCTAAGCATGTGCACCACTGAAATGGTACTGC...GAGTTGATGTTGATCCTTCTGTGCTCCATAACAACTCAGGGTTTGGAAACTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR-3UTR TCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGATTTTGTGTTGTGCCTTaGTGCTGTAGTACTCCTTTG +
Preference number: 2 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGFCVVP*CCSTPL
Trigger: CAAAGGAGTACTACAGCATCAAGGCACAACACAAAA...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR TCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCATGTATGTGGGAATGTaGGTATTTCAGGGAGAAAAG +
Preference number: 2 (lower is better)
Translates to: SMKQITPFVINTLAQPSSMYVGM*VFQGEK
Trigger: CTTTTCTCCCTGAAATACTCACATTCCCACATACAT...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGGTCTTCTCTGGCAATTaGACTGACTTCTCAGGAAAG +
Preference number: 2 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTEVFSGN*TDFSGK
Trigger: CTTTCCTGAGAAGTCAGTCCAATTGCCAGAGAAGAC...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR TCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGTTTTGTGTTGTGCCTTaGTGCTGTAGTACTCCTTTG +
Preference number: 2 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTEFCVVP*CCSTPL
Trigger: CAAAGGAGTACTACAGCATCAAGGCACAACACAAAA...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR TCA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCCTCTGGCAATTGGACTaGCTTCTCAGGAAAGCGCTA +
Preference number: 2 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSILWQLD*LLRKAL
Trigger: TAGCGCTTTCCTGAGAAGTCAGTCCAATTGCCAGAG...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR TCA 90 bp TCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACCCAGTTTATGGTTCGAGAGAAAGGACTTaGGAGGAGGATGAAGAAGGT +
Preference number: 2 (lower is better)
Translates to: SRRLRNKFLLLTSYPVYGSRERT*EEDEEG
Trigger: ACCTTCTTCATCCTCCTCTCAAGTCCTTTCTCTCGA...ACCATAAACTGGGTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
3UTR-3UTR TCA 90 bp TCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACCCAGTTTATGGTAGGGCAGAGCCTTTATaGATGGGATTGCTGTCCTTA +
Preference number: 2 (lower is better)
Translates to: SRRLRNKFLLLTSYPVYGRAEPL*MGLLSL
Trigger: TAAGGACAGCAATCCCATTCATAAAGGCTCTGCCCT...ACCATAAACTGGGTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
3UTR-3UTR GCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCATTGGTTTTTGTGTTGTaGCTTGATGCTGTAGTACTC +
Preference number: 2 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLALVFVL*LDAVVL
Trigger: GAGTACTACAGCATCAAGGCACAACACAAAAACCAA...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR GCA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCATATTTGCTACTGTATaGACGTTTGGATCTTCCAGC +
Preference number: 2 (lower is better)
Translates to: LQQPELRCRLTNFASITCIFATV*TFGSSS
Trigger: GCTGGAAGATCCAAACGTGCATACAGTAGCAAATAT...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR GCA 90 bp ATATGCACCAAACACAGGCATTTCAACAGTAAGGGTCTGTCAACATTCACAAACGAAAGACAAGCTTTCTaGCCTCATAGAGCTTACACT +
Preference number: 2 (lower is better)
Translates to: ICTKHRHFNSKGLSTFTNERQAF*PHRAYT
Trigger: AGTGTAAGCTCTATGAGGGCAGAAAGCTTGTCTTTC...GTTTGTGAATGTTGACAGACCCTTACTGTTGAAATGCCTGTGTTTGGTGCATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
3UTR-3UTR GCA 90 bp TGCAGTTTCCAAACCCTGAGTTGTTATGGAGCACAGAAGGATCAACATCAACTCACTATTCTATATGTTTaGCACAGCTGCATACCACTT +
Preference number: 2 (lower is better)
Translates to: CSFQTLSCYGAQKDQHQLTILYV*HSCIPL
Trigger: AAGTGGTATGCAGCTGTGGCAAACATATAGAATAGT...GAGTTGATGTTGATCCTTCTGTGCTCCATAACAACTCAGGGTTTGGAAACTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR-3UTR CCA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCTCTGATGGATTGCTGTaGATTCGTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: SFQLQQPELRCRLTNFASSDGLL*IRVCVC
Trigger: ACACACACACACACGAATCCACAGCAATCCATCAGA...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CCA 90 bp TGCAGTTTCCAAACCCTGAGTTGTTATGGAGCACAGAAGGATCAACATCAACTCCACATAAGACAGACTTaGATTGATGTTATGCTTTCC +
Preference number: 2 (lower is better)
Translates to: CSFQTLSCYGAQKDQHQLHIRQT*IDVMLS
Trigger: GGAAAGCATAACATCAATCCAAGTCTGTCTTATGTG...GAGTTGATGTTGATCCTTCTGTGCTCCATAACAACTCAGGGTTTGGAAACTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
3UTR-3UTR CCA 90 bp ATATGCACCAAACACAGGCATTTCAACAGTAAGGGTCTGTCAACATTCACAAACACAGATGGCACAAGGTaGGGATATTCACATAAGACA +
Preference number: 2 (lower is better)
Translates to: ICTKHRHFNSKGLSTFTNTDGTR*GYSHKT
Trigger: TGTCTTATGTGAATATCCCCACCTTGTGCCATCTGT...GTTTGTGAATGTTGACAGACCCTTACTGTTGAAATGCCTGTGTTTGGTGCATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
3UTR-3UTR CCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGCATTGGATTCTTCAATaGCGATGTCATCTGTCCCAA +
Preference number: 2 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMHWILQ*RCHLSQ
Trigger: TTGGGACAGATGACATCGCCATTGAAGAATCCAATG...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637906.1
3UTR-3UTR TCA 90 bp GATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACTCATTCCAGATCCCCTaGATTCACTACTCACACAAG +
Preference number: 2 (lower is better)
Translates to: DFSNWKLCTSQTNSLYSNSFQIP*IHYSHK
Trigger: CTTGTGTGAGTAGTGAATTCAGGGGATCTGGAATGA...GTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
3UTR-3UTR TCA 90 bp ATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACAAGGGCAGAGCCTTTATaGATGGGATTGCTGTCCTTA +
Preference number: 2 (lower is better)
Translates to: ILVTGSCALHRQIRYIATRAEPL*MGLLSL
Trigger: TAAGGACAGCAATCCCATTCATAAAGGCTCTGCCCT...TGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
3UTR-3UTR TCA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCAAGGTGCTGTATGTCTaGAATCCAGGCCACTTCTTG +
Preference number: 2 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSIKVLYV*NPGHFL
Trigger: CAAGAAGTGGCCTGGATTTCAGACATACAGCACCTT...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR TCA 90 bp AACTACTTTGATCTCTATTTGAATTCCCGGCCATTCAAAGTTCCTTGTCATTTTTGCTTCAAAGGCCCCTaGTCCCAAATTAATGACCAG +
Preference number: 2 (lower is better)
Translates to: NYFDLYLNSRPFKVPCHFCFKGP*SQINDQ
Trigger: CTGGTCATTAATTTGGGATCAGGGGCCTTTGAAGCA...AAAATGACAAGGAACTTTGAATGGCCGGGAATTCAAATAGAGATCAAAGTAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626249.2
3UTR-3UTR TCA 90 bp AACTACTTTGATCTCTATTTGAATTCCCGGCCATTCAAAGTTCCTTGTCATTTTAAGAATCCCATCCACTaGTATTGTCACCTGACGCAG +
Preference number: 2 (lower is better)
Translates to: NYFDLYLNSRPFKVPCHFKNPIH*YCHLTQ
Trigger: CTGCGTCAGGTGACAATATCAGTGGATGGGATTCTT...AAAATGACAAGGAACTTTGAATGGCCGGGAATTCAAATAGAGATCAAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626249.2
3UTR-3UTR GCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGTTGGTTTTTGTGTTGTaGCTTGATGCTGTAGTACTC +
Preference number: 2 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTELVFVL*LDAVVL
Trigger: GAGTACTACAGCATCAAGGCACAACACAAAAACCAA...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR GCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCAAACTCTTAAAGGTTTaGAGGTTGAGTCACTCAAAA +
Preference number: 2 (lower is better)
Translates to: SMKQITPFVINTLAQPSSKLLKV*RLSHSK
Trigger: TTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR GCA 90 bp GTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACACAGGACATGGCAAATTACACATaGTTCTGGATTTCGTACCAA +
Preference number: 2 (lower is better)
Translates to: VTGSCALHRQIRYIATQDMANYT*FWISYQ
Trigger: TTGGTACGAAATCCAGAAGCATGTGTAATTTGCCAT...GTCCTGTGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR-3UTR CCA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAAGTCTTCTCTGGCAATTaGACTGACTTCTCAGGAAAG +
Preference number: 2 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKVFSGN*TDFSGK
Trigger: CTTTCCTGAGAAGTCAGTCCAATTGCCAGAGAAGAC...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CCA 90 bp ACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCATATATGAACACTCTGTaGATGCCATGTCATAGTCAT +
Preference number: 2 (lower is better)
Translates to: TLYQSHSTSILSFILTCPYMNTL*MPCHSH
Trigger: ATGACTATGACATGGCATCCACAGAGTGTTCATATA...TGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
3UTR-3UTR CCA 90 bp TTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACACAGCAGAACTGTGAACTGTaGTCCCAATTCACCAGATTA +
Preference number: 2 (lower is better)
Translates to: LVTGSCALHRQIRYIATQQNCEL*SQFTRL
Trigger: TAATCTGGTGAATTGGGACCACAGTTCACAGTTCTG...CTGTGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR CAA 90 bp CTCAATACAGAATGGCTAGGGCAGGTGTGCTCCAGAGCTGAATATTaGAAGATCACATATTTACAGTTCCTACACTTATTTAAGTACCAT +
Preference number: 2 (lower is better)
Translates to: LNTEWLGQVCSRAEY*KITYLQFLHLFKYH
Trigger: ATGGTACTTAAATAAGTGTAGGAACTGTAAATATGTGATCTTCAAATATTCAGCTCTGGAGCACACCTGCCCTAGCCATTCTGTATTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR-3UTR TCA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCATACTCCTTTGCTTTATaGATGCGTGCGGTCATCACT +
Preference number: 2 (lower is better)
Translates to: CRLTNFASITCPHNGSYSYSFAL*MRAVIT
Trigger: AGTGATGACCGCACGCATTCATAAAGCAAAGGAGTA...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR TCA 90 bp TTAGATATTACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGTCTTAACTTTAAAATGGACAGTTaGAACCACCGCCCCCAAACA +
Preference number: 2 (lower is better)
Translates to: LDITHQLVQVEELYPGLNFKMDS*NHRPQT
Trigger: TGTTTGGGGGCGGTGGTTTCAACTGTCCATTTTAAA...GTTAAGACCTGGATACAACTCTTCCACCTGAACTAATTGATGAGTAATATCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
3UTR-3UTR TCA 90 bp CCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGCTTCATAATGATCTATaGGCTGTTTCCCTCCCCCAA +
Preference number: 2 (lower is better)
Translates to: PQNPTNSNLIQSYNTQLQLHNDL*AVSLPQ
Trigger: TTGGGGGAGGGAAACAGCTCATAGATCATTATGAAG...CTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000625891.2
ENST00000628515.2
3UTR-3UTR TCA 90 bp CTTTCTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACCTTCATAATGATCTATaGGCTGTTTCCCTCCCCCAA +
Preference number: 2 (lower is better)
Translates to: LSLPKTQQIPILYKVTIHLHNDL*AVSLPQ
Trigger: TTGGGGGAGGGAAACAGCTCATAGATCATTATGAAG...GTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000625891.2
ENST00000628515.2
3UTR-3UTR GCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCGCTGTAGTACTCCTTTaGTTTATGAATGCGTGCGGT +
Preference number: 2 (lower is better)
Translates to: CNNIISVHENFPMIASMPAVVLL*FMNACG
Trigger: ACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR GCA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATATTTGCTACTGTATaGACGTTTGGATCTTCCAGC +
Preference number: 2 (lower is better)
Translates to: SFQLQQPELRCRLTNFASIFATV*TFGSSS
Trigger: GCTGGAAGATCCAAACGTGCATACAGTAGCAAATAT...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR GCA 90 bp GGTAATATTAGATATTACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGATACCTACCTCCCAGTaGCCATTACCAATGCCAAAA +
Preference number: 2 (lower is better)
Translates to: GNIRYYSSISSGGRVVSRIPTSQ*PLPMPK
Trigger: TTTTGGCATTGGTAATGGGCACTGGGAGGTAGGTAT...CCTGGATACAACTCTTCCACCTGAACTAATTGATGAGTAATATCTAATATTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR-3UTR CCA 90 bp ATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTATATGAACACTCTGTaGATGCCATGTCATAGTCAT +
Preference number: 2 (lower is better)
Translates to: IPTSLCTSLTALPFCHSFYMNTL*MPCHSH
Trigger: ATGACTATGACATGGCATCCACAGAGTGTTCATATA...GAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
3UTR-3UTR CCA 90 bp TCTTTAAAATGGACAGTTGAAACCACCGCCCCCAAACAAATACATTTAAGTCATACAGATGGCACAAGGTaGGGATATTCACATAAGACA +
Preference number: 2 (lower is better)
Translates to: SLKWTVETTAPKQIHLSHTDGTR*GYSHKT
Trigger: TGTCTTATGTGAATATCCCCACCTTGTGCCATCTGT...ATGACTTAAATGTATTTGTTTGGGGGCGGTGGTTTCAACTGTCCATTTTAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
3UTR CAA 90 bp CTCGTGAAACGAACTACATGGTATTTCCCATCATTAATGATTGCATaGGATTCTTCAATGGCGATGTCATCTGTCCCAACATTAAACTTA +
Preference number: 2 (lower is better)
Translates to: LVKRTTWYFPSLMIA*DSSMAMSSVPTLNL
Trigger: TAAGTTTAATGTTGGGACAGATGACATCGCCATTGAAGAATCCAATGCAATCATTAATGATGGGAAATACCATGTAGTTCGTTTCACGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637906.1
3UTR-3UTR TCA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCCAGAAAGGGGCTTTTTaGATGTGTTCCTACACAAGT +
Preference number: 2 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSIQKGAF*MCSYTS
Trigger: ACTTGTGTAGGAACACATTCAAAAAGCCCCTTTCTG...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR TCA 90 bp TCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACCCAGTTTATGGTTTCATGAAGACTATTTaGATCCATCTACCCACAACC +
Preference number: 2 (lower is better)
Translates to: SRRLRNKFLLLTSYPVYGFMKTI*IHLPTT
Trigger: GGTTGTGGGTAGATGGATTCAAATAGTCTTCATGAA...ACCATAAACTGGGTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
3UTR-3UTR TCA 90 bp ATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACACAGCCTCCAGACGTTTaGGAAATAAGTTTCTGTTAC +
Preference number: 2 (lower is better)
Translates to: ILVTGSCALHRQIRYIATQPPDV*EISFCY
Trigger: GTAACAGAAACTTATTTCTCAAACGTCTGGAGGCTG...TGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
3UTR-3UTR GCA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAATTGGTTTTTGTGTTGTaGCTTGATGCTGTAGTACTC +
Preference number: 2 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKLVFVL*LDAVVL
Trigger: GAGTACTACAGCATCAAGGCACAACACAAAAACCAA...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR GCA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCATTCAAGCATAGCAGTTaGCTCCACAAAAGCATTCTG +
Preference number: 2 (lower is better)
Translates to: SYYVTELDFESNIILQRPFKHSS*LHKSIL
Trigger: CAGAATGCTTTTGTGGAGGCAACTGCTATGCTTGAA...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
3UTR-3UTR GCA 90 bp TTCAGAATAAACCAAGTACATCACTGCTTACCAACAGCACCTATGGCTAACAGTGAATTACATAGTCGTTaGTTCTCCTATAGGCTAATT +
Preference number: 2 (lower is better)
Translates to: FRINQVHHCLPTAPMANSELHSR*FSYRLI
Trigger: AATTAGCCTATAGGAGAAGCAACGACTATGTAATTC...ACTGTTAGCCATAGGTGCTGTTGGTAAGCAGTGATGTACTTGGTTTATTCTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628515.2
3UTR-3UTR GCA 90 bp TCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACCCAGTTTATGGTATCAAAGAGTACACATaGCTGACTTACCAAGCAATG +
Preference number: 2 (lower is better)
Translates to: SRRLRNKFLLLTSYPVYGIKEYT*LTYQAM
Trigger: CATTGCTTGGTAAGTCAGGCATGTGTACTCTTTGAT...ACCATAAACTGGGTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR-3UTR CCA 90 bp TCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACCCAGTTTATGGTTTTGACTCTTTAAAATaGACAGTTGAAACCACCGCC +
Preference number: 2 (lower is better)
Translates to: SRRLRNKFLLLTSYPVYGFDSLK*TVETTA
Trigger: GGCGGTGGTTTCAACTGTCCATTTTAAAGAGTCAAA...ACCATAAACTGGGTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
3UTR-3UTR CCA 90 bp TTAGATATTACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGTCTTAACGGGTGGGGGCGAAAATaGAAACATATTGATGGATTT +
Preference number: 2 (lower is better)
Translates to: LDITHQLVQVEELYPGLNGWGRK*KHIDGF
Trigger: AAATCCATCAATATGTTTCCATTTTCGCCCCCACCC...GTTAAGACCTGGATACAACTCTTCCACCTGAACTAATTGATGAGTAATATCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR-3UTR CCA 90 bp ACATGTCTCCAGCTGACTTCGCCATTTTTGTCATGTACACATGATAAGGGATTTCAGTGGATGAGATTTTaGCCTCAAGTAAAAATGTTT +
Preference number: 2 (lower is better)
Translates to: TCLQLTSPFLSCTHDKGFQWMRF*PQVKMF
Trigger: AAACATTTTTACTTGAGGCCAAAATCTCATCCACTG...AAATCCCTTATCATGTGTACATGACAAAAATGGCGAAGTCAGCTGGAGACATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR-3UTR TCA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAACATAATAAGCGTGCATaGAAATTTCCCAATGATTGC +
Preference number: 2 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKHNKRA*KFPNDC
Trigger: GCAATCATTGGGAAATTTTCATGCACGCTTATTATG...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR TCA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCAATGTATGTGGGAATGTaGGTATTTCAGGGAGAAAAG +
Preference number: 2 (lower is better)
Translates to: CRLTNFASITCPHNGSYSMYVGM*VFQGEK
Trigger: CTTTTCTCCCTGAAATACTCACATTCCCACATACAT...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR TCA 90 bp GGTAATATTAGATATTACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGTTCATGAAGACTATTTaGATCCATCTACCCACAACC +
Preference number: 2 (lower is better)
Translates to: GNIRYYSSISSGGRVVSRFMKTI*IHLPTT
Trigger: GGTTGTGGGTAGATGGATTCAAATAGTCTTCATGAA...CCTGGATACAACTCTTCCACCTGAACTAATTGATGAGTAATATCTAATATTACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
3UTR-3UTR CCA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCCTTCTTAAGGTTACCTaGGAGCAAGATCTCAATGAA +
Preference number: 2 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSILLKVT*EQDLNE
Trigger: TTCATTGAGATCTTGCTCCCAGGTAACCTTAAGAAG...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CCA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCCCCTTCTTATTTAACTaGCTTTCCCTGAGTAAGACT +
Preference number: 2 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSIPFLFN*LSLSKT
Trigger: AGTCTTACTCAGGGAAAGCCAGTTAAATAAGAAGGG...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR TCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCCATAATAAGCGTGCATaGAAATTTCCCAATGATTGC +
Preference number: 2 (lower is better)
Translates to: CNNIISVHENFPMIASMPHNKRA*KFPNDC
Trigger: GCAATCATTGGGAAATTTTCATGCACGCTTATTATG...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR GCA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCTTTGCTTCCATAACCTaGCCACATAATGGTTCTTAT +
Preference number: 2 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSIFASIT*PHNGSY
Trigger: ATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAA...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR GCA 90 bp CTTGAGAGGAGGATGAAGAAGGTTATCAAAAGGCATGTTCTTTTTACATGTGTTCTTTATGAATGGGATTaGTGTCCTTATAAAAGACAC +
Preference number: 2 (lower is better)
Translates to: LERRMKKVIKRHVLFTCVLYEWD*CPYKRH
Trigger: GTGTCTTTTATAAGGACAGCAATCCCATTCATAAAG...AACACATGTAAAAAGAACATGCCTTTTGATAACCTTCTTCATCCTCCTCTCAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
3UTR-3UTR GCA 90 bp AGATCTACTCTTCACAAAGAGAATAAGGCTTATGCACTTTCAGAATGTGTAACTTTTCAGTGGTGCACATaGTTAGACTTATGTCTCAAT +
Preference number: 2 (lower is better)
Translates to: RSTLHKENKAYALSECVTFQWCT*LDLCLN
Trigger: ATTGAGACATAAGTCTAAGCATGTGCACCACTGAAA...AGTTACACATTCTGAAAGTGCATAAGCCTTATTCTCTTTGTGAAGAGTAGATCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR-3UTR GCA 90 bp ACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGTCTTAACAATTACAATCTTTATGAATGGGATTaGTGTCCTTATAAAAGACAC +
Preference number: 2 (lower is better)
Translates to: THQLVQVEELYPGLNNYNLYEWD*CPYKRH
Trigger: GTGTCTTTTATAAGGACAGCAATCCCATTCATAAAG...ATTGTAATTGTTAAGACCTGGATACAACTCTTCCACCTGAACTAATTGATGAGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
3UTR-3UTR GCA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCTACATATTTCTAAGGTaGTGTATGTCTGAAATCCAG +
Preference number: 2 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSIYIFLR*CMSEIQ
Trigger: CTGGATTTCAGACATACAGCACCTTAGAAATATGTA...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR GCA 90 bp CCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGCGAATTACATAGTCGTTaGTTCTCCTATAGGCTAATT +
Preference number: 2 (lower is better)
Translates to: PKTQQIPILYKVTIHNYSELHSR*FSYRLI
Trigger: AATTAGCCTATAGGAGAAGCAACGACTATGTAATTC...GCTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625891.2
ENST00000628515.2
3UTR-3UTR CCA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCTGGTATGAAGATACTTaGGATTCAAGTCATTTTCTC +
Preference number: 2 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSIWYEDT*DSSHFL
Trigger: GAGAAAATGACTTGAATCCCAAGTATCTTCATACCA...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR GCA 72 bp CCCGGATCACTTCTGCTGAGCCTGGATACGGCTCTCTaGCGCCTGCTCGGGTTGGGTTGGCTAACCCACCTG +
Preference number: 3 (lower is better)
Translates to: PGSLLLSLDTAL*RLLGLGWLTHL
Trigger: CAGGTGGGTTAGCCAACCCAACCCGAGCAGGCGGCAGAGAGCCGTATCCAGGCTCAGCAGAAGTGATCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637906.1
3UTR GCA 72 bp CCCGGATCACTTCTGCTGAGCCTGGATACGGCTCTCTaGCGCCTGCTCGGGTTGGGTTGGCTTAAAGGACCA +
Preference number: 3 (lower is better)
Translates to: PGSLLLSLDTAL*RLLGLGWLKGP
Trigger: TGGTCCTTTAAGCCAACCCAACCCGAGCAGGCGGCAGAGAGCCGTATCCAGGCTCAGCAGAAGTGATCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635519.1
3UTR-3UTR CAA 90 bp CCCGGATCACTTCTGCTGAGCCTGGATACGGCTCTCTGCCGCCTGCTCGGGTTGGAGAGCCAGTGTACTTaGTCTTTGCTCTTGTTCCTG +
Preference number: 3 (lower is better)
Translates to: PGSLLLSLDTALCRLLGLESQCT*SLLLFL
Trigger: CAGGAACAAGAGCAAAGACAAAGTACACTGGCTCTC...CAACCCGAGCAGGCGGCAGAGAGCCGTATCCAGGCTCAGCAGAAGTGATCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637906.1
3UTR-3UTR CAA 90 bp CCCGGATCACTTCTGCTGAGCCTGGATACGGCTCTCTGCCGCCTGCTCGGGTTGGTGTTGGTTTTTGTGTaGTGCCTTGATGCTGTAGTA +
Preference number: 3 (lower is better)
Translates to: PGSLLLSLDTALCRLLGLVLVFV*CLDAVV
Trigger: TACTACAGCATCAAGGCACAACACAAAAACCAACAC...CAACCCGAGCAGGCGGCAGAGAGCCGTATCCAGGCTCAGCAGAAGTGATCCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635519.1
ENST00000637906.1
3UTR GCA 72 bp GGGCTGGCCCTGCTCTTTCCCGCCAATTATTATGGTTaGTTGGCTATTGAAGATTGTGAGCTGACGCCCTGC +
Preference number: 3 (lower is better)
Translates to: GLALLFPANYYG*LAIEDCELTPC
Trigger: GCAGGGCGTCAGCTCACAATCTTCAATAGCCAAGCAACCATAATAATTGGCGGGAAAGAGCAGGGCCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637906.1
3UTR-3UTR CAA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTCAACCACTGCTCCAGTaGCACCAGGCGGCAAACTCT +
Preference number: 3 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLQPLLQ*HQAANS
Trigger: AGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTG...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTTGCCGCCTGCTCGGGTaGGGTTGGCTTAAAGGACCA +
Preference number: 3 (lower is better)
Translates to: GLTSQESASTLAKSRIIGCRLLG*GWLKGP
Trigger: TGGTCCTTTAAGCCAACCCAACCCGAGCAGGCGGCA...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635519.1
3UTR TCA 72 bp AAGGTGAAACTCCGGTCTTCCCACGGTCTGCGGCTGTaGGTTAAGGGGATCCAGTATTGCAAGAGTAGAGGT +
Preference number: 3 (lower is better)
Translates to: KVKLRSSHGLRL*VKGIQYCKSRG
Trigger: ACCTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGTGGGAAGACCGGAGTTTCACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
3UTR-3UTR CAA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTGCTGTAGTACTCCTTaGCTTTATGAATGCGTGCGG +
Preference number: 3 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHCCSTP*LYECVR
Trigger: CCGCACGCATTCATAAAGCAAAGGAGTACTACAGCA...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCCAACCACTGCTCCAGTaGCACCAGGCGGCAAACTCT +
Preference number: 3 (lower is better)
Translates to: SMKQITPFVINTLAQPSSQPLLQ*HQAANS
Trigger: AGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTG...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTTTTCGCACTGCTGGGTaGTTTCTCCTTTACAACAGC +
Preference number: 3 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVFRTAG*FLLYNS
Trigger: GCTGTTGTAAAGGAGAAACAACCCAGCAGTGCGAAA...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635519.1
3UTR GCA 72 bp GCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTaGAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTG +
Preference number: 3 (lower is better)
Translates to: APVAPGGKLLKV*RLSHSKGQSSL
Trigger: CAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCTGTAGTACTCCTTaGCTTTATGAATGCGTGCGG +
Preference number: 3 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVCCSTP*LYECVR
Trigger: CCGCACGCATTCATAAAGCAAAGGAGTACTACAGCA...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACGAAAGCGCTAGCACTTaGGCTAAATCCAGGATCATA +
Preference number: 3 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHESAST*AKSRII
Trigger: TATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTC...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCGAAAGCGCTAGCACTTaGGCTAAATCCAGGATCATA +
Preference number: 3 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCESAST*AKSRII
Trigger: TATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTC...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTTTACAACAGCCCCATaGGACTGTGCTGAGTTACTG +
Preference number: 3 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVFTTAP*DCAELL
Trigger: CAGTAACTCAGCACAGTCCAATGGGGCTGTTGTAAA...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635519.1
3UTR-3UTR CAA 90 bp CTGCTGGGTTGTTTCTCCTTTACAACAGCCCCATTGGACTGTGCTGAGTTACTGTTTCGCACTGCTGGGTaGTTTCTCCTTTACAACAGC +
Preference number: 3 (lower is better)
Translates to: LLGCFSFTTAPLDCAELLFRTAG*FLLYNS
Trigger: GCTGTTGTAAAGGAGAAACAACCCAGCAGTGCGAAA...CAGTAACTCAGCACAGTCCAATGGGGCTGTTGTAAAGGAGAAACAACCCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635519.1
ENST00000637906.1
3UTR TCA 72 bp CCTTTACAACAGCCCCATTGGACTGTGCTGAGTTACTaGTGTAGTTTCGACTCTCGTCCACATGGTATGAGC +
Preference number: 3 (lower is better)
Translates to: PLQQPHWTVLSY*CSFDSRPHGMS
Trigger: GCTCATACCATGTGGACGAGAGTCGAAACTACATCAGTAACTCAGCACAGTCCAATGGGGCTGTTGTAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635519.1
ENST00000637906.1
3UTR GCA 72 bp TTCAGAGCATTTCGGGGGCACAAAGAGACCAGGAAATaGATAATAATTGCAGGAACAGGTTCTGAGGGGGAG +
Preference number: 3 (lower is better)
Translates to: FRAFRGHKETRK*IIIAGTGSEGE
Trigger: CTCCCCCTCAGAACCTGTTCCTGCAATTATTATGCATTTCCTGGTCTCTTTGTGCCCCCGAAATGCTCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000626249.2
3UTR CCA 72 bp AAGGCACTTCACCAACCAGTCTCACATTTCCCACTATaGCGATGTTGGCATCGTTTTCGGCTGCCATATTCA +
Preference number: 3 (lower is better)
Translates to: KALHQPVSHFPL*RCWHRFRLPYS
Trigger: TGAATATGGCAGCCGAAAACGATGCCAACATCGCCATAGTGGGAAATGTGAGACTGGTTGGTGAAGTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637906.1
3UTR-3UTR CAA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTTGCTGTAGTACTCCTTaGCTTTATGAATGCGTGCGG +
Preference number: 3 (lower is better)
Translates to: GLTSQESASTLAKSRIIGCCSTP*LYECVR
Trigger: CCGCACGCATTCATAAAGCAAAGGAGTACTACAGCA...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACGTGTTGGTTTTTGTGTaGTGCCTTGATGCTGTAGTA +
Preference number: 3 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHVLVFV*CLDAVV
Trigger: TACTACAGCATCAAGGCACAACACAAAAACCAACAC...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGTGTTGGTTTTTGTGTaGTGCCTTGATGCTGTAGTA +
Preference number: 3 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVVLVFV*CLDAVV
Trigger: TACTACAGCATCAAGGCACAACACAAAAACCAACAC...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCGTGTTGGTTTTTGTGTaGTGCCTTGATGCTGTAGTA +
Preference number: 3 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCVLVFV*CLDAVV
Trigger: TACTACAGCATCAAGGCACAACACAAAAACCAACAC...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGTTTTGTGTTGGTTTTaGTGTTGTGCCTTGATGCTG +
Preference number: 3 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVVLCWF*CCALML
Trigger: CAGCATCAAGGCACAACACAAAAACCAACACAAAAC...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTGAAAGCGCTAGCACTTaGGCTAAATCCAGGATCATA +
Preference number: 3 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGESAST*AKSRII
Trigger: TATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTC...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCTTAAAGGTTTGCAGGTaGAGTCACTCAAAAGGACAG +
Preference number: 3 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLLKVCR*SHSKGQ
Trigger: CTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGCAACCACTGCTCCAGTaGCACCAGGCGGCAAACTCT +
Preference number: 3 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTEQPLLQ*HQAANS
Trigger: AGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTG...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp GAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGCTGACTTCGCCATTTTaGTCATGTACACATGATAAG +
Preference number: 3 (lower is better)
Translates to: EPGSKISLDTDCVSPWSWLTSPF*SCTHDK
Trigger: CTTATCATGTGTACATGACAAAAATGGCGAAGTCAG...CCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
3UTR-3UTR CAA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAACCTGCAACGTGGCATaGCCACCACTCCTCGTGAAA +
Preference number: 3 (lower is better)
Translates to: AVVLLCFMNACGHHCLLETCNVA*PPLLVK
Trigger: TTTCACGAGGAGTGGTGGCAATGCCACGTTGCAGGT...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637906.1
3UTR-3UTR CAA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCATGCTGTAGTACTCCTTaGCTTTATGAATGCGTGCGG +
Preference number: 3 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSCCSTP*LYECVR
Trigger: CCGCACGCATTCATAAAGCAAAGGAGTACTACAGCA...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTGTGTTGGTTTTTGTGTaGTGCCTTGATGCTGTAGTA +
Preference number: 3 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVVLVFV*CLDAVV
Trigger: TACTACAGCATCAAGGCACAACACAAAAACCAACAC...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTGTTTTGTGTTGGTTTTaGTGTTGTGCCTTGATGCTG +
Preference number: 3 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGVLCWF*CCALML
Trigger: CAGCATCAAGGCACAACACAAAAACCAACACAAAAC...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTGTTTTGTGTTGGTTTTaGTGTTGTGCCTTGATGCTG +
Preference number: 3 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLVLCWF*CCALML
Trigger: CAGCATCAAGGCACAACACAAAAACCAACACAAAAC...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTTTAAAGGTTTGCAGGTaGAGTCACTCAAAAGGACAG +
Preference number: 3 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLLKVCR*SHSKGQ
Trigger: CTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp GAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGCTAACAACAACATCATaGACAAATTTCAAGCCCCAA +
Preference number: 3 (lower is better)
Translates to: EPGSKISLDTDCVSPWSWLTTTS*TNFKPQ
Trigger: TTGGGGCTTGAAATTTGTCAATGATGTTGTTGTTAG...CCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
3UTR TCA 72 bp AGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACGTTTaGGAAATAAGTTTCTGTTACTTACAAGCTACCCAG +
Preference number: 3 (lower is better)
Translates to: SPWSWTSQPPDV*EISFCYLQATQ
Trigger: CTGGGTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
3UTR GCA 72 bp GATGCACCCACAGCAGTACCATTTCAGTGGTGCACATaGTTAGACTTATGTCTCAATACAGAATGGCTAGGG +
Preference number: 3 (lower is better)
Translates to: DAPTAVPFQWCT*LDLCLNTEWLG
Trigger: CCCTAGCCATTCTGTATTGAGACATAAGTCTAAGCATGTGCACCACTGAAATGGTACTGCTGTGGGTGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR CCA 72 bp ACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTaGATTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: TFGSSSISDGLL*IRVCVCVCVCV
Trigger: CACACACACACACACACACACACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR CCA 72 bp CACCAACCAGTCTCACATTTCCCACTATGGCGATGTTaGCATCGTTTTCGGCTGCCATATTCAGAACTTTCA +
Preference number: 3 (lower is better)
Translates to: HQPVSHFPLWRC*HRFRLPYSELS
Trigger: TGAAAGTTCTGAATATGGCAGCCGAAAACGATGCCAACATCGCCATAGTGGGAAATGTGAGACTGGTTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637906.1
3UTR-3UTR CAA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTGTGTTGGTTTTTGTGTaGTGCCTTGATGCTGTAGTA +
Preference number: 3 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTVLVFV*CLDAVV
Trigger: TACTACAGCATCAAGGCACAACACAAAAACCAACAC...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCGTGTTATGTTTTGTGTaGGTTTTTGTGTTGTGCCTT +
Preference number: 3 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLVLCFV*VFVLCL
Trigger: AAGGCACAACACAAAAACCAACACAAAACATAACAC...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp CTGCTGGGTTGTTTCTCCTTTACAACAGCCCCATTGGACTGTGCTGAGTTACTGCAAACTCTTAAAGGTTaGCAGGTTGAGTCACTCAAA +
Preference number: 3 (lower is better)
Translates to: LLGCFSFTTAPLDCAELLQTLKG*QVESLK
Trigger: TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTG...CAGTAACTCAGCACAGTCCAATGGGGCTGTTGTAAAGGAGAAACAACCCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635519.1
3UTR TCA 72 bp GTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTaGCTTCTCAGGAAAGCGCTAGCACTTTGGCTAAAT +
Preference number: 3 (lower is better)
Translates to: VTQKDSLLWQLD*LLRKALALWLN
Trigger: ATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR GCA 72 bp TATGCACGTTTGGATCTTCCAGCATATCTGATGGATTaGTGTGGATTCGTGTGTGTGTGTGTGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: YARLDLPAYLMD*CGFVCVCVCVC
Trigger: ACACACACACACACACACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR CCA 72 bp TGTTTAATTCATTGTGATTCTGCCAGCCCACAGCAGTaGTCTCTAACATGTCTCCAGCTGACTTCGCCATTT +
Preference number: 3 (lower is better)
Translates to: CLIHCDSASPQQ*SLTCLQLTSPF
Trigger: AAATGGCGAAGTCAGCTGGAGACATGTTAGAGACCACTGCTGTGGGCTGGCAGAATCACAATGAATTAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
3UTR CCA 72 bp TGGTGCACATGCTTAGACTTATGTCTCAATACAGAATaGCTAGGGCAGGTGTGCTCCAGAGCTGAATATTTG +
Preference number: 3 (lower is better)
Translates to: WCTCLDLCLNTE*LGQVCSRAEYL
Trigger: CAAATATTCAGCTCTGGAGCACACCTGCCCTAGCCATTCTGTATTGAGACATAAGTCTAAGCATGTGCACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR-3UTR CAA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTGTGTTATGTTTTGTGTaGGTTTTTGTGTTGTGCCTT +
Preference number: 3 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGVLCFV*VFVLCL
Trigger: AAGGCACAACACAAAAACCAACACAAAACATAACAC...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTTTAAAGGTTTGCAGGTaGAGTCACTCAAAAGGACAG +
Preference number: 3 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCLKVCR*SHSKGQ
Trigger: CTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCAGCATATCTGATGGATaGCTGTGGATTCGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: SMKQITPFVINTLAQPSSSISDG*LWIRVC
Trigger: ACACACACGAATCCACAGCAATCCATCAGATATGCT...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp ACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGGTAACAAAAGTAAGGTTGGCTTaGAATAACAGATCTTCAGCT +
Preference number: 3 (lower is better)
Translates to: TVCGCELRGSSIARVEVTKVRLA*NNRSSA
Trigger: AGCTGAAGATCTGTTATTCAAAGCCAACCTTACTTT...TGTTACCTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
3UTR-3UTR CAA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAATTTACAACAGCCCCATaGGACTGTGCTGAGTTACTG +
Preference number: 3 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEFTTAP*DCAELL
Trigger: CAGTAACTCAGCACAGTCCAATGGGGCTGTTGTAAA...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635519.1
ENST00000637906.1
3UTR-3UTR CAA 90 bp CTGCTGGGTTGTTTCTCCTTTACAACAGCCCCATTGGACTGTGCTGAGTTACTGTGTCCATTTAAGATCTaGGGATCAGACATAATACTC +
Preference number: 3 (lower is better)
Translates to: LLGCFSFTTAPLDCAELLCPFKI*GSDIIL
Trigger: GAGTATTATGTCTGATCCCAAGATCTTAAATGGACA...CAGTAACTCAGCACAGTCCAATGGGGCTGTTGTAAAGGAGAAACAACCCAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635519.1
ENST00000637906.1
3UTR TCA 72 bp AAAGTGAGACCAGTGCTTACCTCGAGAGAAAGGACTTaGGAGGAGGATGAAGAAGGTTATCAAAAGGCATGT +
Preference number: 3 (lower is better)
Translates to: KVRPVLTSRERT*EEDEEGYQKAC
Trigger: ACATGCCTTTTGATAACCTTCTTCATCCTCCTCTCAAGTCCTTTCTCTCGAGGTAAGCACTGGTCTCACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
3UTR TCA 72 bp TTTCAAGTGAGGACACAAAGAGAAGGTAGTGATCTATaGACCAGGAAGCAAAATCTCACTGGACACCGACTG +
Preference number: 3 (lower is better)
Translates to: FQVRTQREGSDL*TRKQNLTGHRL
Trigger: CAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTCATAGATCACTACCTTCTCTTTGTGTCCTCACTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
3UTR GCA 72 bp ATTTCCCACTATGGCGATGTTGGCATCGTTTTCGGCTaGCATATTCAGAACTTTCAAGCCATTGTAGTACAG +
Preference number: 3 (lower is better)
Translates to: ISHYGDVGIVFG*HIQNFQAIVVQ
Trigger: CTGTACTACAATGGCTTGAAAGTTCTGAATATGGCAGCCGAAAACGATGCCAACATCGCCATAGTGGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637906.1
3UTR-3UTR CAA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGTGCTGTAGTACTCCTTaGCTTTATGAATGCGTGCGG +
Preference number: 3 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTECCSTP*LYECVR
Trigger: CCGCACGCATTCATAAAGCAAAGGAGTACTACAGCA...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCAAACTCTTAAAGGTTaGCAGGTTGAGTCACTCAAA +
Preference number: 3 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSQTLKG*QVESLK
Trigger: TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTG...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCCCAGAAAGGGGCTTTTaGAATGTGTTCCTACACAAG +
Preference number: 3 (lower is better)
Translates to: LQQPELRCRLTNFASITCPERGF*NVFLHK
Trigger: CTTGTGTAGGAACACATTCAAAAAGCCCCTTTCTGG...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCCTACTGTATGCACGTTaGGATCTTCCAGCATATCTG +
Preference number: 3 (lower is better)
Translates to: LQQPELRCRLTNFASITCLLYAR*DLPAYL
Trigger: CAGATATGCTGGAAGATCCAAACGTGCATACAGTAG...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp AGGGAAATAAGCATTTCAGAGCATTTCGGGGGCACAAAGAGACCAGGAAATGCAAGGGAAAGACCTAAGTaGCTTCTAAGGAATATGAGA +
Preference number: 3 (lower is better)
Translates to: REISISEHFGGTKRPGNARERPK*LLRNMR
Trigger: TCTCATATTCCTTAGAAGCAACTTAGGTCTTTCCCT...TGCATTTCCTGGTCTCTTTGTGCCCCCGAAATGCTCTGAAATGCTTATTTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626249.2
3UTR TCA 72 bp GCCTTTTTAGGTTACTACAGTGTTCATGTGCATAAATaGCACCTAGCAGACAACAAGATGATGCACCCACAG +
Preference number: 3 (lower is better)
Translates to: AFLGYYSVHVHK*HLADNKMMHPQ
Trigger: CTGTGGGTGCATCATCTTGTTGTCTGCTAGGTGTCATTTATGCACATGAACACTGTAGTAACCTAAAAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR CCA 72 bp CAACAAGATGATGCACCCACAGCAGTACCATTTCAGTaGTGCACATGCTTAGACTTATGTCTCAATACAGAA +
Preference number: 3 (lower is better)
Translates to: QQDDAPTAVPFQ*CTCLDLCLNTE
Trigger: TTCTGTATTGAGACATAAGTCTAAGCATGTGCACCACTGAAATGGTACTGCTGTGGGTGCATCATCTTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR CCA 72 bp GATGACACAAACATAAAGGTGCAGAACTGTGAACTGTaGTCCCAATTCACCAGATTAACACTGAGAACACAG +
Preference number: 3 (lower is better)
Translates to: DDTNIKVQNCEL*SQFTRLTLRTQ
Trigger: CTGTGTTCTCAGTGTTAATCTGGTGAATTGGGACCACAGTTCACAGTTCTGCACCTTTATGTTTGTGTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR-3UTR CAA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCGTTTTGTGTTGGTTTTaGTGTTGTGCCTTGATGCTG +
Preference number: 3 (lower is better)
Translates to: LQQPELRCRLTNFASITCVLCWF*CCALML
Trigger: CAGCATCAAGGCACAACACAAAAACCAACACAAAAC...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTGTGTTATGTTTTGTGTaGGTTTTTGTGTTGTGCCTT +
Preference number: 3 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCVLCFV*VFVLCL
Trigger: AAGGCACAACACAAAAACCAACACAAAACATAACAC...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCGTGTTATGTTTTGTGTaGGTTTTTGTGTTGTGCCTT +
Preference number: 3 (lower is better)
Translates to: TSQESASTLAKSRIIGSFVLCFV*VFVLCL
Trigger: AAGGCACAACACAAAAACCAACACAAAACATAACAC...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCAGTGTTATGTTTTGTGTaGGTTTTTGTGTTGTGCCTT +
Preference number: 3 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSVLCFV*VFVLCL
Trigger: AAGGCACAACACAAAAACCAACACAAAACATAACAC...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR TCA 72 bp ATGAGAAGAATGAGTAAACTCGTGTTTAATTCATTGTaGTTCTGCCAGCCCACAGCAGTGGTCTCTAACATG +
Preference number: 3 (lower is better)
Translates to: MRRMSKLVFNSL*FCQPTAVVSNM
Trigger: CATGTTAGAGACCACTGCTGTGGGCTGGCAGAATCACAATGAATTAAACACGAGTTTACTCATTCTTCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
3UTR GCA 72 bp CTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTaGGGTCATCACTGTCTTTTAGAAATGTTCCAGCAA +
Preference number: 3 (lower is better)
Translates to: LDAVVLLCFMNA*GHHCLLEMFQQ
Trigger: TTGCTGGAACATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
3UTR GCA 72 bp GTTTTTGTGTTGTGCCTTGATGCTGTAGTACTCCTTTaGTTTATGAATGCGTGCGGTCATCACTGTCTTTTA +
Preference number: 3 (lower is better)
Translates to: VFVLCLDAVVLL*FMNACGHHCLL
Trigger: TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACACAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
3UTR-3UTR CAA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGGTTTTGTGTTGGTTTTaGTGTTGTGCCTTGATGCTG +
Preference number: 3 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTEVLCWF*CCALML
Trigger: CAGCATCAAGGCACAACACAAAAACCAACACAAAAC...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCGTGTTATGTTTTGTGTaGGTTTTTGTGTTGTGCCTT +
Preference number: 3 (lower is better)
Translates to: SMKQITPFVINTLAQPSSVLCFV*VFVLCL
Trigger: AAGGCACAACACAAAAACCAACACAAAACATAACAC...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGTGTTATGTTTTGTGTaGGTTTTTGTGTTGTGCCTT +
Preference number: 3 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTVLCFV*VFVLCL
Trigger: AAGGCACAACACAAAAACCAACACAAAACATAACAC...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCCAAACTCTTAAAGGTTaGCAGGTTGAGTCACTCAAA +
Preference number: 3 (lower is better)
Translates to: LQQPELRCRLTNFASITCQTLKG*QVESLK
Trigger: TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTG...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCAGCAAATCACCCCATTaGTCATCAATACCTTGGCAC +
Preference number: 3 (lower is better)
Translates to: SFQLQQPELRCRLTNFASSKSPH*SSIPWH
Trigger: GTGCCAAGGTATTGATGACAAATGGGGTGATTTGCT...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp GACTTCCCAGCCTCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACGCAGTGGATGAGATTTaGGCCTCAAGTAAAAATGTT +
Preference number: 3 (lower is better)
Translates to: DFPASRRLRNKFLLLTSYAVDEI*ASSKNV
Trigger: AACATTTTTACTTGAGGCCAAAATCTCATCCACTGC...GTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGAGGCTGGGAAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR-3UTR CAA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCGTGTTGGTTTTTGTGTaGTGCCTTGATGCTGTAGTA +
Preference number: 3 (lower is better)
Translates to: SFQLQQPELRCRLTNFASVLVFV*CLDAVV
Trigger: TACTACAGCATCAAGGCACAACACAAAAACCAACAC...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCGTTTTGTGTTGGTTTTaGTGTTGTGCCTTGATGCTG +
Preference number: 3 (lower is better)
Translates to: SFQLQQPELRCRLTNFASVLCWF*CCALML
Trigger: CAGCATCAAGGCACAACACAAAAACCAACACAAAAC...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAGTGTTATGTTTTGTGTaGGTTTTTGTGTTGTGCCTT +
Preference number: 3 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAVLCFV*VFVLCL
Trigger: AAGGCACAACACAAAAACCAACACAAAACATAACAC...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp ATATGCACCAAACACAGGCATTTCAACAGTAAGGGTCTGTCAACATTCACAAACGGGTACCAATGTGATTaGCAAAATACTCAAGTCCAT +
Preference number: 3 (lower is better)
Translates to: ICTKHRHFNSKGLSTFTNGYQCD*QNTQVH
Trigger: ATGGACTTGAGTATTTTGCAAATCACATTGGTACCC...GTTTGTGAATGTTGACAGACCCTTACTGTTGAAATGCCTGTGTTTGGTGCATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR GCA 72 bp GACTTATGTCTCAATACAGAATGGCTAGGGCAGGTGTaGTCCAGAGCTGAATATTTGAAGATCACATATTTA +
Preference number: 3 (lower is better)
Translates to: DLCLNTEWLGQV*SRAEYLKITYL
Trigger: TAAATATGTGATCTTCAAATATTCAGCTCTGGAGCACACCTGCCCTAGCCATTCTGTATTGAGACATAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR-3UTR CAA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCGAAAGCGCTAGCACTTaGGCTAAATCCAGGATCATA +
Preference number: 3 (lower is better)
Translates to: CNNIISVHENFPMIASMPESAST*AKSRII
Trigger: TATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTC...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCGAAAGCGCTAGCACTTaGGCTAAATCCAGGATCATA +
Preference number: 3 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSIESAST*AKSRII
Trigger: TATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTC...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAATTAAAGGTTTGCAGGTaGAGTCACTCAAAAGGACAG +
Preference number: 3 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKLKVCR*SHSKGQ
Trigger: CTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCCCAGAAAGGGGCTTTTaGAATGTGTTCCTACACAAG +
Preference number: 3 (lower is better)
Translates to: CNNIISVHENFPMIASMPPERGF*NVFLHK
Trigger: CTTGTGTAGGAACACATTCAAAAAGCCCCTTTCTGG...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCCTACTGTATGCACGTTaGGATCTTCCAGCATATCTG +
Preference number: 3 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSILLYAR*DLPAYL
Trigger: CAGATATGCTGGAAGATCCAAACGTGCATACAGTAG...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCACTACTGTATGCACGTTaGGATCTTCCAGCATATCTG +
Preference number: 3 (lower is better)
Translates to: CRLTNFASITCPHNGSYSLLYAR*DLPAYL
Trigger: CAGATATGCTGGAAGATCCAAACGTGCATACAGTAG...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp ACATGTCTCCAGCTGACTTCGCCATTTTTGTCATGTACACATGATAAGGGATTTCTAACAACAACATCATaGACAAATTTCAAGCCCCAA +
Preference number: 3 (lower is better)
Translates to: TCLQLTSPFLSCTHDKGFLTTTS*TNFKPQ
Trigger: TTGGGGCTTGAAATTTGTCAATGATGTTGTTGTTAG...AAATCCCTTATCATGTGTACATGACAAAAATGGCGAAGTCAGCTGGAGACATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
3UTR-3UTR CAA 90 bp CTTGAGAGGAGGATGAAGAAGGTTATCAAAAGGCATGTTCTTTTTACATGTGTTGTTCAGGTGGAAGAGTaGTATCCAGGTCTTAACAAT +
Preference number: 3 (lower is better)
Translates to: LERRMKKVIKRHVLFTCVVQVEE*YPGLNN
Trigger: ATTGTTAAGACCTGGATACAACTCTTCCACCTGAAC...AACACATGTAAAAAGAACATGCCTTTTGATAACCTTCTTCATCCTCCTCTCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
3UTR TCA 72 bp CTGCAAACTATGCAGGGAACCCTGATATGTTTGGTATaGAGATACTTGGGATTCAAGTCATTTTCTCTTTCT +
Preference number: 3 (lower is better)
Translates to: LQTMQGTLICLV*RYLGFKSFSLS
Trigger: AGAAAGAGAAAATGACTTGAATCCCAAGTATCTTCATACCAAACATATCAGGGTTCCCTGCATAGTTTGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR CCA 72 bp GAACATGATGAGAAATGCCCACTTAAGAGAACGCAGTaGATGAGATTTTGGCCTCAAGTAAAAATGTTTAGA +
Preference number: 3 (lower is better)
Translates to: EHDEKCPLKRTQ*MRFWPQVKMFR
Trigger: TCTAAACATTTTTACTTGAGGCCAAAATCTCATCCACTGCGTTCTCTTAAGTGGGCATTTCTCATCATGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR-3UTR CAA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCATTAAAGGTTTGCAGGTaGAGTCACTCAAAAGGACAG +
Preference number: 3 (lower is better)
Translates to: CRLTNFASITCPHNGSYSLKVCR*SHSKGQ
Trigger: CTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAACAAACTCTTAAAGGTTaGCAGGTTGAGTCACTCAAA +
Preference number: 3 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKQTLKG*QVESLK
Trigger: TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTG...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR-3UTR CAA 90 bp ATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACAGACTATTCTATATGTTaGCCACAGCTGCATACCACT +
Preference number: 3 (lower is better)
Translates to: ILVTGSCALHRQIRYIATDYSIC*PQLHTT
Trigger: AGTGGTATGCAGCTGTGGCAAACATATAGAATAGTC...TGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR-3UTR CAA 90 bp ATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACAAAAGTAAGGTTGGCTTaGAATAACAGATCTTCAGCT +
Preference number: 3 (lower is better)
Translates to: ILVTGSCALHRQIRYIATKVRLA*NNRSSA
Trigger: AGCTGAAGATCTGTTATTCAAAGCCAACCTTACTTT...TGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
3UTR-3UTR CAA 90 bp ACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGTCTTAACAATTACAATTTTAGTAACTGGAAGTaGTGCACTTCACAGACAAAT +
Preference number: 3 (lower is better)
Translates to: THQLVQVEELYPGLNNYNFSNWK*CTSQTN
Trigger: ATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAA...ATTGTAATTGTTAAGACCTGGATACAACTCTTCCACCTGAACTAATTGATGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
3UTR-3UTR CAA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCTGTCCATTTAAGATCTaGGGATCAGACATAATACTC +
Preference number: 3 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSICPFKI*GSDIIL
Trigger: GAGTATTATGTCTGATCCCAAGATCTTAAATGGACA...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635519.1
3UTR-3UTR CAA 90 bp TTAGATATTACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGTCTTAACATCATTTCTTACATATaGCCTGGCTCATGTTCAGAT +
Preference number: 3 (lower is better)
Translates to: LDITHQLVQVEELYPGLNIISYI*PGSCSD
Trigger: ATCTGAACATGAGCCAGGCAATATGTAAGAAATGAT...GTTAAGACCTGGATACAACTCTTCCACCTGAACTAATTGATGAGTAATATCTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS-3UTR GCA 90 bp CCCGGATCACTTCTGCTGAGCCTGGATACGGCTCTCTGCCGCCTGCTCGGGTTGCTGGATACGGCTCTCTaGCGCCTGCTCGGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: PGSLLLSLDTALCRLLGLLDTAL*RLLGLG
Trigger: ACCCAACCCGAGCAGGCGGCAGAGAGCCGTATCCAG...CAACCCGAGCAGGCGGCAGAGAGCCGTATCCAGGCTCAGCAGAAGTGATCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635519.1
ENST00000637906.1
CDS-3UTR GCA 90 bp CTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACGTTGGAACTGGCGGCGGATaGGCACGCTGTGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: LDTDCVSPWSWTSQPPDVGTGGG*ARCARR
Trigger: GCGCCTGGCACAGCGTGCGCATCCGCCGCCAGTTCC...AACGTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp CTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACGTTGAAACTCCAGCCCGCTaGCCAGCTCCGCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LDTDCVSPWSWTSQPPDVETPAR*PAPPSS
Trigger: GCTGCTGGGCGGAGCTGGGCAGCGGGCTGGAGTTTC...AACGTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp TCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACATGGAGAAGCTGAGCTaGAGGCGGCCGCCGCGCGTC +
Preference number: 4 (lower is better)
Translates to: SLDTDCVSPWSWTSQPPDMEKLS*RRPPRV
Trigger: GACGCGCGGCGGCCGCCTGCAGCTCAGCTTCTCCAT...GTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp TCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACCGGATGCGCACGCTGTaGCAGGCGCCGTCGTTAACC +
Preference number: 4 (lower is better)
Translates to: SLDTDCVSPWSWTSQPPDRMRTL*QAPSLT
Trigger: GGTTAACGACGGCGCCTGGCACAGCGTGCGCATCCG...GTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp TCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACCACGAATCCACCCCTTaGAGGGCTCCCGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: SLDTDCVSPWSWTSQPPDHESTP*RAPAPS
Trigger: TGAGGGAGCGGGAGCCCTTCAAGGGGTGGATTCGTG...GTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTGCGTCCGCCGCCTCCTaGCACTTACGCCCGGCGAGG +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGASAAS*HLRPAR
Trigger: CCTCGCCGGGCGTAAGTGTCAGGAGGCGGCGGACGC...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR TCA 90 bp CCCGGATCACTTCTGCTGAGCCTGGATACGGCTCTCTGCCGCCTGCTCGGGTTGGCAATAGGCACTGAATaGTGCTTGCTGCTGCCATGG +
Preference number: 4 (lower is better)
Translates to: PGSLLLSLDTALCRLLGLAIGTE*CLLLPW
Trigger: CCATGGCAGCAGCAAGCATCATTCAGTGCCTATTGC...CAACCCGAGCAGGCGGCAGAGAGCCGTATCCAGGCTCAGCAGAAGTGATCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR TCA 90 bp CTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACGTTGGACCTGCGAGGAGTTaGCCCTCACGTCACGAATCC +
Preference number: 4 (lower is better)
Translates to: LDTDCVSPWSWTSQPPDVGPARS*PSRHES
Trigger: GGATTCGTGACGTGAGGGTCAACTCCTCGCAGGTCC...AACGTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp CTTCCCACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGAGCACACACCTCCGTTaGGGCACACCCCGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: LPTVCGCELRGSSIARVESTHLR*GTPRPR
Trigger: GCGAGGGCGGGGTGTGCCTCAACGGAGGTGTGTGCT...CTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGTGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACGGAACTGGCGGCGGATaGGCACGCTGTGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHGTGGG*ARCARR
Trigger: GCGCCTGGCACAGCGTGCGCATCCGCCGCCAGTTCC...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGCATCCTCTGGTACATaGCGGGGCGCCCGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVASSGT*RGARRG
Trigger: CCCTCGGCGGGCGCCCCGCCATGTACCAGAGGATGC...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR TCA 90 bp CTTCCCACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGAGAAGATGGAGAAGCTaGGCTGCAGGCGGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: LPTVCGCELRGSSIARVERRWRS*AAGGRR
Trigger: GCGGCGGCCGCCTGCAGCTCAGCTTCTCCATCTTCT...CTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGTGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACATGGAGAAGCTGAGCTaGAGGCGGCCGCCGCGCGTC +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHMEKLS*RRPPRV
Trigger: GACGCGCGGCGGCCGCCTGCAGCTCAGCTTCTCCAT...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp CAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCACGGGCAGGACCTaGGAGGAGTTGACCCTCACG +
Preference number: 4 (lower is better)
Translates to: QNLTGHRLCQPLVLDFPASTGRT*EELTLT
Trigger: CGTGAGGGTCAACTCCTCGCAGGTCCTGCCCGTGGA...GGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTGCATCCTCTGGTACATaGCGGGGCGCCCGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVASSGT*RGARRG
Trigger: CCCTCGGCGGGCGCCCCGCCATGTACCAGAGGATGC...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR CCA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCGGGAAGCGCGTCCATTaGCCCTCGGCGCCCGGAAAC +
Preference number: 4 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCGKRVH*PSAPGN
Trigger: GTTTCCGGGCGCCGAGGGCCAATGGACGCGCTTCCC...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp CTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACGTTCACTTGGCCTCCACCTaGTCGATGAAGAGCGTGGTG +
Preference number: 4 (lower is better)
Translates to: LDTDCVSPWSWTSQPPDVHLAST*SMKSVV
Trigger: CACCACGCTCTTCATCGACCAGGTGGAGGCCAAGTG...AACGTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTGGTGGGCTCGGCCCGTaGTCGCAGCCCCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGGGLGP*SQPLQV
Trigger: GACCTGGAGGGGCTGCGACCACGGGCCGAGCCCACC...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCTGGCTGGGGAATGGGTaGGCTCGGCCCGTGGTCGCA +
Preference number: 4 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCWLGNG*ARPVVA
Trigger: TGCGACCACGGGCCGAGCCCACCCATTCCCCAGCCA...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCGGCGGGCCCGTCCTTTaGCTGGGGAATGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLGGPVL*LGNGWA
Trigger: AGCCCACCCATTCCCCAGCCAAAGGACGGGCCCGCC...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACCTCTCCGCAGTACCATaGAGAGCGGCGGGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHLSAVP*RAAGPS
Trigger: GGACGGGCCCGCCGCTCTCCATGGTACTGCGGAGAG...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404971.5
ENST00000406316.6
CDS-3UTR TCA 90 bp CTTCCCACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGCACGAATCCACCCCTTaGAGGGCTCCCGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: LPTVCGCELRGSSIARVEHESTP*RAPAPS
Trigger: TGAGGGAGCGGGAGCCCTTCAAGGGGTGGATTCGTG...CTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGTGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp CAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCGGACCTGCGAGGAGTTaGCCCTCACGTCACGAATCC +
Preference number: 4 (lower is better)
Translates to: QNLTGHRLCQPLVLDFPAGPARS*PSRHES
Trigger: GGATTCGTGACGTGAGGGTCAACTCCTCGCAGGTCC...GGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAGCGGCGCGCATCGCCTaGTCCCGAGGCAATCTCCGC +
Preference number: 4 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKAARIA*SRGNLR
Trigger: GCGGAGATTGCCTCGGGAGCAGGCGATGCGCGCCGC...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR GCA 90 bp TCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACGGGCTTCAGCACCGCTaGAGCCAAAGCCTAATTCCT +
Preference number: 4 (lower is better)
Translates to: SLDTDCVSPWSWTSQPPDGLQHR*SQSLIP
Trigger: AGGAATTAGGCTTTGGCTGCAGCGGTGCTGAAGCCC...GTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR GCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTGAAACTCCAGCCCGCTaGCCAGCTCCGCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLETPAR*PAPPSS
Trigger: GCTGCTGGGCGGAGCTGGGCAGCGGGCTGGAGTTTC...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTATGGAGAAGCTGAGCTaGAGGCGGCCGCCGCGCGTC +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGMEKLS*RRPPRV
Trigger: GACGCGCGGCGGCCGCCTGCAGCTCAGCTTCTCCAT...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCCTTGGCTGCAGTCCTTaGCGCGGAAGCCGGTTCGCG +
Preference number: 4 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCLGCSP*RGSRFA
Trigger: CGCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAG...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCTACAGCCCAGAGAGCTaGCCCTGGAAGGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCYSPES*PWKGWP
Trigger: GGGCCAGCCCTTCCAGGGCCAGCTCTCTGGGCTGTA...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTACAGCCCAGAGAGCTaGCCCTGGAAGGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHYSPES*PWKGWP
Trigger: GGGCCAGCCCTTCCAGGGCCAGCTCTCTGGGCTGTA...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GGCTTTCCTCTTCTGGCTGTGCTAGTAGCCAGGGTCGTGGTAGTCTCCATAATTTACAGCCCAGAGAGCTaGCCCTGGAAGGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GFPLLAVLVARVVVVSIIYSPES*PWKGWP
Trigger: GGGCCAGCCCTTCCAGGGCCAGCTCTCTGGGCTGTA...AATTATGGAGACTACCACGACCCTGGCTACTAGCACAGCCAGAAGAGGAAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR CCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAACAGCCCCCGCGCTaGAGCAGCGCCGTCCCCATG +
Preference number: 4 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLKQPPR*SSAVPM
Trigger: CATGGGGACGGCGCTGCTCCAGCGCGGGGGCTGTTT...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTAAACAGCCCCCGCGCTaGAGCAGCGCCGTCCCCATG +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGKQPPR*SSAVPM
Trigger: CATGGGGACGGCGCTGCTCCAGCGCGGGGGCTGTTT...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCTATGAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTGGGAAGCGCGTCCATTaGCCCTCGGCGCCCGGAAAC +
Preference number: 4 (lower is better)
Translates to: SMNQEAKSHWTPTVSALGGKRVH*PSAPGN
Trigger: GTTTCCGGGCGCCGAGGGCCAATGGACGCGCTTCCC...ACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTCATAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CCA 90 bp CTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACGTTCTGCGAGTCTTGAGCTaGAAGCTCATCTCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: LDTDCVSPWSWTSQPPDVLRVLS*KLISLS
Trigger: CGAGAGCGAGATGAGCTTCCAGCTCAAGACTCGCAG...AACGTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCGTGGTGTTGCGGAACTaGCGGCGGATGCGCACGCTG +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLVVLRN*RRMRTL
Trigger: CAGCGTGCGCATCCGCCGCCAGTTCCGCAACACCAC...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACGACTGTGTCAGCCCTTaGTCTTGGACTTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SLDTDCVSPWSWTSQPPDDCVSP*SWTSQP
Trigger: AGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTC...GTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCGGGCGCTGCGAGTCTTaGGCTGGAAGCTCATCTCGC +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLGRCES*AGSSSR
Trigger: GCGAGATGAGCTTCCAGCTCAAGACTCGCAGCGCCC...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAGAAGATGGAGAAGCTaGGCTGCAGGCGGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLRRWRS*AAGGRR
Trigger: GCGGCGGCCGCCTGCAGCTCAGCTTCTCCATCTTCT...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACCCCTGCGCTTGGACTTaGCCTCCACCCACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHPCAWT*PPPTWP
Trigger: AGGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGG...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACCACGAATCCACCCCTTaGAGGGCTCCCGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHHESTP*RAPAPS
Trigger: TGAGGGAGCGGGAGCCCTTCAAGGGGTGGATTCGTG...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGCACACACCTCCGTTaGGGCACACCCCGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKSTHLR*GTPRPR
Trigger: GCGAGGGCGGGGTGTGCCTCAACGGAGGTGTGTGCT...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACGAAGGCTGGGTTACGTaGCGCCGGGTGCTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHEGWVT*RRVLSF
Trigger: GAAGGACAGCACCCGGCGTCACGTAACCCAGCCTTC...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404971.5
ENST00000406316.6
CDS-3UTR GCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTCGCGGAGCGGGTGGCTaGTCCCAGATTTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLRGAGG*SQISRA
Trigger: AGCCCTGGAAATCTGGGAGCAGCCACCCGCTCCGCG...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR GCA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCCTGGATACGGCTCTCTaGCGCCTGCTCGGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCLDTAL*RLLGLG
Trigger: ACCCAACCCGAGCAGGCGGCAGAGAGCCGTATCCAG...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTGAAACTCCAGCCCGCTaGCCAGCTCCGCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGETPAR*PAPPSS
Trigger: GCTGCTGGGCGGAGCTGGGCAGCGGGCTGGAGTTTC...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTCGGATGCGCACGCTGTaGCAGGCGCCGTCGTTAACC +
Preference number: 4 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVRMRTL*QAPSLT
Trigger: GGTTAACGACGGCGCCTGGCACAGCGTGCGCATCCG...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCAGGAACTGGCGGCGGATaGGCACGCTGTGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSGTGGG*ARCARR
Trigger: GCGCCTGGCACAGCGTGCGCATCCGCCGCCAGTTCC...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCTATGAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGCTGCAGTCCTTaGCGCGGAAGCCGGTTCGCG +
Preference number: 4 (lower is better)
Translates to: SMNQEAKSHWTPTVSALGLGCSP*RGSRFA
Trigger: CGCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAG...ACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTCATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTCACCGGAGCATCCTCTaGTACATGGCGGGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGHRSIL*YMAGRP
Trigger: CGGGCGCCCCGCCATGTACCAGAGGATGCTCCGGTG...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR CCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGGCCCTGGAAGGGCTaGCCCTGCTCTTTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVWPWKG*PCSFPP
Trigger: TGGCGGGAAAGAGCAGGGCCAGCCCTTCCAGGGCCA...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTACAGCCCAGAGAGCTaGCCCTGGAAGGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGYSPES*PWKGWP
Trigger: GGGCCAGCCCTTCCAGGGCCAGCTCTCTGGGCTGTA...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTCAGTCGCACACGGCCTaGTCGTCCACCACGGAGCAC +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGQSHTA*SSTTEH
Trigger: GTGCTCCGTGGTGGACGACCAGGCCGTGTGCGACTG...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp ACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGGTAACACAGTCGCACACGGCCTaGTCGTCCACCACGGAGCAC +
Preference number: 4 (lower is better)
Translates to: TVCGCELRGSSIARVEVTQSHTA*SSTTEH
Trigger: GTGCTCCGTGGTGGACGACCAGGCCGTGTGCGACTG...TGTTACCTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CCA 90 bp CTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACGTTACATTGTTGTCTTCTTaGCTGCAGTCCTTGCCGCGG +
Preference number: 4 (lower is better)
Translates to: LDTDCVSPWSWTSQPPDVTLLSS*LQSLPR
Trigger: CCGCGGCAAGGACTGCAGCCAAGAAGACAACAATGT...AACGTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAGCGTCCGCCGCCTCCTaGCACTTACGCCCGGCGAGG +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAASAAS*HLRPAR
Trigger: CCTCGCCGGGCGTAAGTGTCAGGAGGCGGCGGACGC...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR TCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTGGGCGCTGCGAGTCTTaGGCTGGAAGCTCATCTCGC +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGGRCES*AGSSSR
Trigger: GCGAGATGAGCTTCCAGCTCAAGACTCGCAGCGCCC...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTCCTCCACCTGGTCGATaGAGAGCGTGGTGTTGCGGA +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVPPPGR*RAWCCG
Trigger: TCCGCAACACCACGCTCTTCATCGACCAGGTGGAGG...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTCCCTGCGCTTGGACTTaGCCTCCACCCACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVPCAWT*PPPTWP
Trigger: AGGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGG...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTCACGAATCCACCCCTTaGAGGGCTCCCGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLHESTP*RAPAPS
Trigger: TGAGGGAGCGGGAGCCCTTCAAGGGGTGGATTCGTG...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCAAGCACACACCTCCGTTaGGGCACACCCCGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSSTHLR*GTPRPR
Trigger: GCGAGGGCGGGGTGTGCCTCAACGGAGGTGTGTGCT...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATAGCACACACCTCCGTTaGGGCACACCCCGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHSTHLR*GTPRPR
Trigger: GCGAGGGCGGGGTGTGCCTCAACGGAGGTGTGTGCT...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCCGGGTGCTGTCCTTCTaGAAGAGAAGGGCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCRVLSF*KRRAEL
Trigger: CAGCTCCGCCCTTCTCTTTCAGAAGGACAGCACCCG...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404971.5
ENST00000406316.6
CDS-3UTR GCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTCTGGATACGGCTCTCTaGCGCCTGCTCGGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLLDTAL*RLLGLG
Trigger: ACCCAACCCGAGCAGGCGGCAGAGAGCCGTATCCAG...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp CCCGGATCACTTCTGCTGAGCCTGGATACGGCTCTCTGCCGCCTGCTCGGGTTGATGTCATCTGTGGTCTaGAAGTTTTCACAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: PGSLLLSLDTALCRLLGLMSSVV*KFSQCH
Trigger: ATGGCACTGTGAAAACTTGCAGACCACAGATGACAT...CAACCCGAGCAGGCGGCAGAGAGCCGTATCCAGGCTCAGCAGAAGTGATCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635519.1
CDS-3UTR GCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTGAAACTCCAGCCCGCTaGCCAGCTCCGCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCETPAR*PAPPSS
Trigger: GCTGCTGGGCGGAGCTGGGCAGCGGGCTGGAGTTTC...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTATGGAGAAGCTGAGCTaGAGGCGGCCGCCGCGCGTC +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCMEKLS*RRPPRV
Trigger: GACGCGCGGCGGCCGCCTGCAGCTCAGCTTCTCCAT...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGGAACTGGCGGCGGATaGGCACGCTGTGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTGTGGG*ARCARR
Trigger: GCGCCTGGCACAGCGTGCGCATCCGCCGCCAGTTCC...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTCCCTCCAGGTCTGGATaGTGCGGAGCGAGGTGCTTT +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVPSRSG*CGARCF
Trigger: AAAGCACCTCGCTCCGCAGCATCCAGACCTGGAGGG...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406316.6
CDS-3UTR GCA 90 bp CTGCTGGGTTGTTTCTCCTTTACAACAGCCCCATTGGACTGTGCTGAGTTACTGCGGCTCTCTGCCGCCTaGTCGGGTTGGGTTGGCTTA +
Preference number: 4 (lower is better)
Translates to: LLGCFSFTTAPLDCAELLRLSAA*SGWVGL
Trigger: TAAGCCAACCCAACCCGAGCAGGCGGCAGAGAGCCG...CAGTAACTCAGCACAGTCCAATGGGGCTGTTGTAAAGGAGAAACAACCCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635519.1
CDS-3UTR CCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTCAGAAGCAGACCCCATaGAATCCAGGCGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVQKQTP*NPGAPS
Trigger: GGAAGGGGCGCCTGGATTCCATGGGGTCTGCTTCTG...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR CCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTCAAGCGCGGAGCGGGTaGCTGCTCCCAGATTTCCAG +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGQARSG*LLPDFQ
Trigger: CTGGAAATCTGGGAGCAGCCACCCGCTCCGCGCTTG...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR CCA 90 bp CACATTTCCCACTATGGCGATGTTGGCATCGTTTTCGGCTGCCATATTCAGAACTGGCCCTGGAAGGGCTaGCCCTGCTCTTTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: HISHYGDVGIVFGCHIQNWPWKG*PCSFPP
Trigger: TGGCGGGAAAGAGCAGGGCCAGCCCTTCCAGGGCCA...GTTCTGAATATGGCAGCCGAAAACGATGCCAACATCGCCATAGTGGGAAATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR CCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCAAACAGCCCCCGCGCTaGAGCAGCGCCGTCCCCATG +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFKQPPR*SSAVPM
Trigger: CATGGGGACGGCGCTGCTCCAGCGCGGGGGCTGTTT...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACAGCAGGCGTTCCACTTaGGGAAGCGCGTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHSRRST*GSASIG
Trigger: GCCAATGGACGCGCTTCCCCAAGTGGAACGCCTGCT...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTGTGGTGTTGCGGAACTaGCGGCGGATGCGCACGCTG +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGVVLRN*RRMRTL
Trigger: CAGCGTGCGCATCCGCCGCCAGTTCCGCAACACCAC...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp CTTCCCACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGCACTTGGCCTCCACCTaGTCGATGAAGAGCGTGGTG +
Preference number: 4 (lower is better)
Translates to: LPTVCGCELRGSSIARVEHLAST*SMKSVV
Trigger: CACCACGCTCTTCATCGACCAGGTGGAGGCCAAGTG...CTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGTGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAATTCCCCCGCCGCTGTTaGGCGGCTCATCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKFPRRC*AAHRPA
Trigger: AGCTGGACGATGAGCCGCCCAACAGCGGCGGGGGAA...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAACCTTTGGCTGGGGAATaGGTGGGCTCGGCCCGTGGT +
Preference number: 4 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKPLAGE*VGSARG
Trigger: ACCACGGGCCGAGCCCACCCATTCCCCAGCCAAAGG...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCAGGCCCGTCCTTTGGCTaGGGAATGGGTGGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSGPSFG*GMGGLG
Trigger: GCCGAGCCCACCCATTCCCCAGCCAAAGGACGGGCC...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCACTCTCCGCAGTACCATaGAGAGCGGCGGGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSLSAVP*RAAGPS
Trigger: GGACGGGCCCGCCGCTCTCCATGGTACTGCGGAGAG...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404971.5
ENST00000406316.6
CDS-3UTR TCA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCGCTGGGACACTCTGCTaGGGCCACAAGGATGTCATC +
Preference number: 4 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCAGTLC*GHKDVI
Trigger: GATGACATCCTTGTGGCCTCAGCAGAGTGTCCCAGC...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACGCTGGGACACTCTGCTaGGGCCACAAGGATGTCATC +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHAGTLC*GHKDVI
Trigger: GATGACATCCTTGTGGCCTCAGCAGAGTGTCCCAGC...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCGCTGGGACACTCTGCTaGGGCCACAAGGATGTCATC +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLAGTLC*GHKDVI
Trigger: GATGACATCCTTGTGGCCTCAGCAGAGTGTCCCAGC...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCCCGGATCACTTCTGCTaGGCCTGGATACGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLPDHFC*AWIRLS
Trigger: AGAGAGCCGTATCCAGGCTCAGCAGAAGTGATCCGG...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp GAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACAGGAAGCCAGCAGTaGGCCAGTATCCTTGGATGC +
Preference number: 4 (lower is better)
Translates to: EPGSKISLDTDCVSPWSWTGSQQ*ASILGC
Trigger: GCATCCAAGGATACTGGCTCACTGCTGGCTTCCTGT...CCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR TCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTAGAAGATGGAGAAGCTaGGCTGCAGGCGGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCRRWRS*AAGGRR
Trigger: GCGGCGGCCGCCTGCAGCTCAGCTTCTCCATCTTCT...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCCCTGCGCTTGGACTTaGCCTCCACCCACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTPCAWT*PPPTWP
Trigger: AGGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGG...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTCGACGAAAAGGCCGCTaGACACCGTCATGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVRRKGR*TPSCPC
Trigger: GCAGGGACATGACGGTGTTCAGCGGCCTTTTCGTCG...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCACGAATCCACCCCTTaGAGGGCTCCCGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTHESTP*RAPAPS
Trigger: TGAGGGAGCGGGAGCCCTTCAAGGGGTGGATTCGTG...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTGGACCTGCGAGGAGTTaGCCCTCACGTCACGAATCC +
Preference number: 4 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVGPARS*PSRHES
Trigger: GGATTCGTGACGTGAGGGTCAACTCCTCGCAGGTCC...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TGTTTAATTCATTGTGATTCTGCCAGCCCACAGCAGTGGTCTCTAACATGTCTCAGCACACACCTCCGTTaGGGCACACCCCGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: CLIHCDSASPQQWSLTCLSTHLR*GTPRPR
Trigger: GCGAGGGCGGGGTGTGCCTCAACGGAGGTGTGTGCT...GAGACATGTTAGAGACCACTGCTGTGGGCTGGCAGAATCACAATGAATTAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
CDS-3UTR TCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTCAGAGGCGTCAGGCTTaGGCGTCTATCTCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVQRRQA*ASISRS
Trigger: ACTCCTGGAGATAGACGCTCAAGCCTGACGCCTCTG...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR TCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACCAGAGGCGTCAGGCTTaGGCGTCTATCTCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHQRRQA*ASISRS
Trigger: ACTCCTGGAGATAGACGCTCAAGCCTGACGCCTCTG...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR TCA 90 bp CAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCGAACCCACAAAATaGCGGATTAGGAGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: QNLTGHRLCQPLVLDFPASEPTK*RIRRGG
Trigger: TCCCCCTCTCCTAATCCGTCATTTTGTGGGTTCGGA...GGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp CTTCCCACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGCACGGTCTGCGGCTGTaGGTTAAGGGGATCCAGTAT +
Preference number: 4 (lower is better)
Translates to: LPTVCGCELRGSSIARVEHGLRL*VKGIQY
Trigger: ATACTGGATCCCCTTAACTCACAGCCGCAGACCGTG...CTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGTGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp GTGACCCTGGAAGGTCGGCTGTGCTGGGACTGCCTCCAACATAGAAAAAGTCATAATGAGGGAGCGCCATaGCCCTTCCTGATAGGTCAG +
Preference number: 4 (lower is better)
Translates to: VTLEGRLCWDCLQHRKSHNEGAP*PFLIGQ
Trigger: CTGACCTATCAGGAAGGGTCATGGCGCTCCCTCATT...ATGACTTTTTCTATGTTGGAGGCAGTCCCAGCACAGCCGACCTTCCAGGGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626249.2
CDS-3UTR GCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGCGGCGCGCATCGCCTaGTCCCGAGGCAATCTCCGC +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLAARIA*SRGNLR
Trigger: GCGGAGATTGCCTCGGGAGCAGGCGATGCGCGCCGC...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR GCA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCCATAGCCGAGGCGAATaGAGCTGGAGAGGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCHSRGE*SWRGAC
Trigger: ACAAGCCCCTCTCCAGCTGCATTCGCCTCGGCTATG...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR GCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAACTGGATACGGCTCTCTaGCGCCTGCTCGGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKLDTAL*RLLGLG
Trigger: ACCCAACCCGAGCAGGCGGCAGAGAGCCGTATCCAG...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTGGATACGGCTCTCTaGCGCCTGCTCGGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTLDTAL*RLLGLG
Trigger: ACCCAACCCGAGCAGGCGGCAGAGAGCCGTATCCAG...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACGCAAGTTCCAACCACTaGTCCAGTTGCACCAGGCGG +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHASSNH*SSCTRR
Trigger: CCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGC...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCGCAAGTTCCAACCACTaGTCCAGTTGCACCAGGCGG +
Preference number: 4 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCASSNH*SSCTRR
Trigger: CCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGC...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCCTGGAAGGTCGGCTGTaGTGGGACTGCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCLEGRL*WDCLQH
Trigger: ATGTTGGAGGCAGTCCCAGCACAGCCGACCTTCCAG...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCCCGGCCTATCAGTaGCCTGCACACAGATGGGCG +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGSPAYQ*PAHRWA
Trigger: CGCCCATCTGTGTGCAGGGCACTGATAGGCCGGGCT...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378262.7
ENST00000412315.5
CDS-3UTR GCA 90 bp CACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCATGGAGAAGCTGAGCTaGAGGCGGCCGCCGCGCGTC +
Preference number: 4 (lower is better)
Translates to: HFVPVSQHFHSVIHSNLPMEKLS*RRPPRV
Trigger: GACGCGCGGCGGCCGCCTGCAGCTCAGCTTCTCCAT...GGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR GCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTCGGATGCGCACGCTGTaGCAGGCGCCGTCGTTAACC +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCRMRTL*QAPSLT
Trigger: GGTTAACGACGGCGCCTGGCACAGCGTGCGCATCCG...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCGGATGCGCACGCTGTaGCAGGCGCCGTCGTTAACC +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSRMRTL*QAPSLT
Trigger: GGTTAACGACGGCGCCTGGCACAGCGTGCGCATCCG...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTCAGAAGCAGACCCCATaGAATCCAGGCGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVQKQTP*NPGAPS
Trigger: GGAAGGGGCGCCTGGATTCCATGGGGTCTGCTTCTG...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR CCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAGTGCGTGCCGGCGGGTaGGGGGCCGAGAAATTGTTT +
Preference number: 4 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKVRAGG*GAEKLF
Trigger: AAACAATTTCTCGGCCCCCCACCCGCCGGCACGCAC...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR CCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCAGCGGGAGGCAAAGTTTaGGGCGCGGGGAGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSAGGKV*GAGRGE
Trigger: CTCTCCTCTCCCCGCGCCCCAAACTTTGCCTCCCGC...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR CCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCTGTCCACCTGCAACGTaGCATTGCCACCACTCCTCG +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLCPPAT*HCHHSS
Trigger: CGAGGAGTGGTGGCAATGCCACGTTGCAGGTGGACA...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATTGGCCCTGGAAGGGCTaGCCCTGCTCTTTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHWPWKG*PCSFPP
Trigger: TGGCGGGAAAGAGCAGGGCCAGCCCTTCCAGGGCCA...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
ENST00000637906.1
CDS-3UTR CCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTTACAGCCCAGAGAGCTaGCCCTGGAAGGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCYSPES*PWKGWP
Trigger: GGGCCAGCCCTTCCAGGGCCAGCTCTCTGGGCTGTA...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TGCAGTTTCCAAACCCTGAGTTGTTATGGAGCACAGAAGGATCAACATCAACTCAAACAGCCCCCGCGCTaGAGCAGCGCCGTCCCCATG +
Preference number: 4 (lower is better)
Translates to: CSFQTLSCYGAQKDQHQLKQPPR*SSAVPM
Trigger: CATGGGGACGGCGCTGCTCCAGCGCGGGGGCTGTTT...GAGTTGATGTTGATCCTTCTGTGCTCCATAACAACTCAGGGTTTGGAAACTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405581.3
CDS-3UTR CCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCGTGGTGTTGCGGAACTaGCGGCGGATGCGCACGCTG +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFVVLRN*RRMRTL
Trigger: CAGCGTGCGCATCCGCCGCCAGTTCCGCAACACCAC...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTCACTTGGCCTCCACCTaGTCGATGAAGAGCGTGGTG +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVHLAST*SMKSVV
Trigger: CACCACGCTCTTCATCGACCAGGTGGAGGCCAAGTG...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTCAGTCGCACACGGCCTaGTCGTCCACCACGGAGCAC +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCQSHTA*SSTTEH
Trigger: GTGCTCCGTGGTGGACGACCAGGCCGTGTGCGACTG...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCAGTCGCACACGGCCTaGTCGTCCACCACGGAGCAC +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSQSHTA*SSTTEH
Trigger: GTGCTCCGTGGTGGACGACCAGGCCGTGTGCGACTG...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp CTGCTGGGTTGTTTCTCCTTTACAACAGCCCCATTGGACTGTGCTGAGTTACTGGCCGCCTGCTCGGGTTaGGTTGGCTTAAAGGACCAC +
Preference number: 4 (lower is better)
Translates to: LLGCFSFTTAPLDCAELLAACSG*VGLKDH
Trigger: GTGGTCCTTTAAGCCAACCCAACCCGAGCAGGCGGC...CAGTAACTCAGCACAGTCCAATGGGGCTGTTGTAAAGGAGAAACAACCCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635519.1
CDS-3UTR TCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTTGGTCCTGGACACCGTaGCGAAGAAATAAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVWSWTP*RRNKGP
Trigger: GGGACCCTTATTTCTTCGTCACGGTGTCCAGGACCA...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTGGGCGCTGCGAGTCTTaGGCTGGAAGCTCATCTCGC +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCGRCES*AGSSSR
Trigger: GCGAGATGAGCTTCCAGCTCAAGACTCGCAGCGCCC...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TGCAGTTTCCAAACCCTGAGTTGTTATGGAGCACAGAAGGATCAACATCAACTCAGAAGATGGAGAAGCTaGGCTGCAGGCGGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: CSFQTLSCYGAQKDQHQLRRWRS*AAGGRR
Trigger: GCGGCGGCCGCCTGCAGCTCAGCTTCTCCATCTTCT...GAGTTGATGTTGATCCTTCTGTGCTCCATAACAACTCAGGGTTTGGAAACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR TCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTCCTCCACCTGGTCGATaGAGAGCGTGGTGTTGCGGA +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGPPPGR*RAWCCG
Trigger: TCCGCAACACCACGCTCTTCATCGACCAGGTGGAGG...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTCACGAATCCACCCCTTaGAGGGCTCCCGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCHESTP*RAPAPS
Trigger: TGAGGGAGCGGGAGCCCTTCAAGGGGTGGATTCGTG...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp ACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGGTAACACAGAGGCGTCAGGCTTaGGCGTCTATCTCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: TVCGCELRGSSIARVEVTQRRQA*ASISRS
Trigger: ACTCCTGGAGATAGACGCTCAAGCCTGACGCCTCTG...TGTTACCTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405581.3
CDS-3UTR TCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTCAGAGGCGTCAGGCTTaGGCGTCTATCTCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVQRRQA*ASISRS
Trigger: ACTCCTGGAGATAGACGCTCAAGCCTGACGCCTCTG...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR TCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCCCAATGCCTGAGTGCTaGCGCAGATTCCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLPMPEC*RRFLVT
Trigger: AGTCACCAGGAATCTGCGTCAGCACTCAGGCATTGG...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR TCA 90 bp CTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACGTTTCTGATATTATAAGGTaGAACTCCGGTCTTCCCACG +
Preference number: 4 (lower is better)
Translates to: LDTDCVSPWSWTSQPPDVSDIIR*NSGLPT
Trigger: CGTGGGAAGACCGGAGTTTCACCTTATAATATCAGA...AACGTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTATGGCCAGTCTGTCTaGTCGTGTACTGGGTCGGTC +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHYGQSV*SCTGSV
Trigger: GACCGACCCAGTACACGAGCAGACAGACTGGCCATA...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp GGCTTTCCTCTTCTGGCTGTGCTAGTAGCCAGGGTCGTGGTAGTCTCCATAATTTATGGCCAGTCTGTCTaGTCGTGTACTGGGTCGGTC +
Preference number: 4 (lower is better)
Translates to: GFPLLAVLVARVVVVSIIYGQSV*SCTGSV
Trigger: GACCGACCCAGTACACGAGCAGACAGACTGGCCATA...AATTATGGAGACTACCACGACCCTGGCTACTAGCACAGCCAGAAGAGGAAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR GCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGATACGGCTCTCTaGCGCCTGCTCGGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSLDTAL*RLLGLG
Trigger: ACCCAACCCGAGCAGGCGGCAGAGAGCCGTATCCAG...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTCTGGATACGGCTCTCTaGCGCCTGCTCGGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCLDTAL*RLLGLG
Trigger: ACCCAACCCGAGCAGGCGGCAGAGAGCCGTATCCAG...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTCTGGAAGGTCGGCTGTaGTGGGACTGCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVLEGRL*WDCLQH
Trigger: ATGTTGGAGGCAGTCCCAGCACAGCCGACCTTCCAG...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTCCTCTTGGCAGGTTGTaGTGGGCCCTTCACATCCTC +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGPLGRL*WALHIL
Trigger: GAGGATGTGAAGGGCCCAGCACAACCTGCCAAGAGG...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCAGCCCGGCCTATCAGTaGCCTGCACACAGATGGGCG +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFSPAYQ*PAHRWA
Trigger: CGCCCATCTGTGTGCAGGGCACTGATAGGCCGGGCT...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378262.7
ENST00000412315.5
CDS-3UTR GCA 90 bp CTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACGTTTTGGATGCTTGTGAATaGCTCAAGTCTGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LDTDCVSPWSWTSQPPDVLDACE*LKSVSF
Trigger: GAAGGAGACAGACTTGAGGCATTCACAAGCATCCAA...AACGTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR GCA 90 bp GAAGAGGAACCTAATTCCTTCATAATGATCTATGAGCTGTTTCCCTCCCCCAATGAAACTCCAGCCCGCTaGCCAGCTCCGCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: EEEPNSFIMIYELFPSPNETPAR*PAPPSS
Trigger: GCTGCTGGGCGGAGCTGGGCAGCGGGCTGGAGTTTC...ATTGGGGGAGGGAAACAGCTCATAGATCATTATGAAGGAATTAGGTTCCTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR GCA 90 bp GAAGAGGAACCTAATTCCTTCATAATGATCTATGAGCTGTTTCCCTCCCCCAATATGGAGAAGCTGAGCTaGAGGCGGCCGCCGCGCGTC +
Preference number: 4 (lower is better)
Translates to: EEEPNSFIMIYELFPSPNMEKLS*RRPPRV
Trigger: GACGCGCGGCGGCCGCCTGCAGCTCAGCTTCTCCAT...ATTGGGGGAGGGAAACAGCTCATAGATCATTATGAAGGAATTAGGTTCCTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR GCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTCGGATGCGCACGCTGTaGCAGGCGCCGTCGTTAACC +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTRMRTL*QAPSLT
Trigger: GGTTAACGACGGCGCCTGGCACAGCGTGCGCATCCG...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp ATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCGGAACTGGCGGCGGATaGGCACGCTGTGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: IPTSLCTSLTALPFCHSFGTGGG*ARCARR
Trigger: GCGCCTGGCACAGCGTGCGCATCCGCCGCCAGTTCC...GAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR GCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCATCCACGGGCAGGACCTaGGAGGAGTTGACCCTCACG +
Preference number: 4 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSSTGRT*EELTLT
Trigger: CGTGAGGGTCAACTCCTCGCAGGTCCTGCCCGTGGA...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTGTCTATCTCCAGGAGTaGGGGAGGGGAGAACAGGCA +
Preference number: 4 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVVYLQE*GRGEQA
Trigger: TGCCTGTTCTCCCCTCCCGCACTCCTGGAGATAGAC...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404971.5
ENST00000406316.6
CDS-3UTR GCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTTTGCATCGTCCCCTTaGAGGGGGAGCCTGATCCTG +
Preference number: 4 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVFASSP*RGSLIL
Trigger: CAGGATCAGGCTCCCCCTGCAAGGGGACGATGCAAA...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000406316.6
CDS-3UTR CCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCAAGCGCGGAGCGGGTaGCTGCTCCCAGATTTCCAG +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSQARSG*LLPDFQ
Trigger: CTGGAAATCTGGGAGCAGCCACCCGCTCCGCGCTTG...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR CCA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCGAGGCGAATGCAGCTaGAGAGGGGCTTGTCCGGAA +
Preference number: 4 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTRGECS*RGACPE
Trigger: TTCCGGACAAGCCCCTCTCCAGCTGCATTCGCCTCG...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR CCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCGTCTTCTCGGGGTCCTaGAGTCCGCCGTGCCTAGCA +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFVFSGS*SPPCLA
Trigger: TGCTAGGCACGGCGGACTCCAGGACCCCGAGAAGAC...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR CCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTGTCTTCTCGGGGTCCTaGAGTCCGCCGTGCCTAGCA +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSVFSGS*SPPCLA
Trigger: TGCTAGGCACGGCGGACTCCAGGACCCCGAGAAGAC...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR CCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTACACCGGAGCATCCTCTaGTACATGGCGGGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLHRSIL*YMAGRP
Trigger: CGGGCGCCCCGCCATGTACCAGAGGATGCTCCGGTG...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR CCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTTGTCCACCTGCAACGTaGCATTGCCACCACTCCTCG +
Preference number: 4 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLCPPAT*HCHHSS
Trigger: CGAGGAGTGGTGGCAATGCCACGTTGCAGGTGGACA...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTTGGCCCTGGAAGGGCTaGCCCTGCTCTTTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTWPWKG*PCSFPP
Trigger: TGGCGGGAAAGAGCAGGGCCAGCCCTTCCAGGGCCA...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTCGACTCTCGTCCACATaGTATGAGCCTTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVRLSST*YEPSSR
Trigger: CCGGGATGAAGGCTCATACCATGTGGACGAGAGTCG...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCCGACTCTCGTCCACATaGTATGAGCCTTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCRLSST*YEPSSR
Trigger: CCGGGATGAAGGCTCATACCATGTGGACGAGAGTCG...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCCTTGGCAGGTTGTGCTaGGCCCTTCACATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCLGRLC*ALHILS
Trigger: AGAGAGGATGTGAAGGGCCCAGCACAACCTGCCAAG...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGTCTTCTGTCATAGCATaGGCTTCAGCACCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: EPGSKISLDTDCVSPWSWSSVIA*ASAPLQ
Trigger: CTGCAGCGGTGCTGAAGCCCATGCTATGACAGAAGA...CCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR CCA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCAAACAGCCCCCGCGCTaGAGCAGCGCCGTCCCCATG +
Preference number: 4 (lower is better)
Translates to: LQQPELRCRLTNFASITCKQPPR*SSAVPM
Trigger: CATGGGGACGGCGCTGCTCCAGCGCGGGGGCTGTTT...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCGGGAAGCGCGTCCATTaGCCCTCGGCGCCCGGAAAC +
Preference number: 4 (lower is better)
Translates to: LQQPELRCRLTNFASITCGKRVH*PSAPGN
Trigger: GTTTCCGGGCGCCGAGGGCCAATGGACGCGCTTCCC...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGGGAAGCGCGTCCATTaGCCCTCGGCGCCCGGAAAC +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLGKRVH*PSAPGN
Trigger: GTTTCCGGGCGCCGAGGGCCAATGGACGCGCTTCCC...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp CAACAGATGGCACAAGGTGGGGATATTCACATAAGACAGACTTGGATTGATGTTGGGAAGCGCGTCCATTaGCCCTCGGCGCCCGGAAAC +
Preference number: 4 (lower is better)
Translates to: QQMAQGGDIHIRQTWIDVGKRVH*PSAPGN
Trigger: GTTTCCGGGCGCCGAGGGCCAATGGACGCGCTTCCC...AACATCAATCCAAGTCTGTCTTATGTGAATATCCCCACCTTGTGCCATCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCCTGCGAGTCTTGAGCTaGAAGCTCATCTCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLLRVLS*KLISLS
Trigger: CGAGAGCGAGATGAGCTTCCAGCTCAAGACTCGCAG...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TGTTTAATTCATTGTGATTCTGCCAGCCCACAGCAGTGGTCTCTAACATGTCTCTTCCCCCGCCGCTGTTaGGCGGCTCATCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: CLIHCDSASPQQWSLTCLFPRRC*AAHRPA
Trigger: AGCTGGACGATGAGCCGCCCAACAGCGGCGGGGGAA...GAGACATGTTAGAGACCACTGCTGTGGGCTGGCAGAATCACAATGAATTAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
CDS-3UTR CCA 90 bp GAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACATTGTTGTCTTCTTaGCTGCAGTCCTTGCCGCGG +
Preference number: 4 (lower is better)
Translates to: EPGSKISLDTDCVSPWSWTLLSS*LQSLPR
Trigger: CCGCGGCAAGGACTGCAGCCAAGAAGACAACAATGT...CCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CCA 90 bp AATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTGGTGGGCTCGGCCCGTaGTCGCAGCCCCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: NSYFTLYQSHSTSILSFIGGLGP*SQPLQV
Trigger: GACCTGGAGGGGCTGCGACCACGGGCCGAGCCCACC...AATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS-3UTR CCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAGGCCCGTCCTTTGGCTaGGGAATGGGTGGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAGPSFG*GMGGLG
Trigger: GCCGAGCCCACCCATTCCCCAGCCAAAGGACGGGCC...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAGGCGGGCCCGTCCTTTaGCTGGGGAATGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAGGPVL*LGNGWA
Trigger: AGCCCACCCATTCCCCAGCCAAAGGACGGGCCCGCC...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp CTGAATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCGGCGGGCCCGTCCTTTaGCTGGGGAATGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: LNSYFTLYQSHSTSILSFGGPVL*LGNGWA
Trigger: AGCCCACCCATTCCCCAGCCAAAGGACGGGCCCGCC...GAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS-3UTR CCA 90 bp CAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTGTCTCAATACAGAATaGCTAGGGCAGGTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: QNLTGHRLCQPLVLDFPACLNTE*LGQVCS
Trigger: GGAGCACACCTGCCCTAGCCATTCTGTATTGAGACA...GGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGCGTCCGCCGCCTCCTaGCACTTACGCCCGGCGAGG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKASAAS*HLRPAR
Trigger: CCTCGCCGGGCGTAAGTGTCAGGAGGCGGCGGACGC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000628364.2
CDS-3UTR TCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGCAATAGGCACTGAATaGTGCTTGCTGCTGCCATGG +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVAIGTE*CLLLPW
Trigger: CCATGGCAGCAGCAAGCATCATTCAGTGCCTATTGC...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR TCA 90 bp GTTGACTCAGTTGTCATAGAGGAAGGCACTTCACCAACCAGTCTCACATTTCCCCCGGATCACTTCTGCTaGGCCTGGATACGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: VDSVVIEEGTSPTSLTFPPDHFC*AWIRLS
Trigger: AGAGAGCCGTATCCAGGCTCAGCAGAAGTGATCCGG...GGGAAATGTGAGACTGGTTGGTGAAGTGCCTTCCTCTATGACAACTGAGTCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR TCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTCTCGTCCACATGGTATaGGCCTTCATCCCGGTTTCT +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVLVHMV*AFIPVS
Trigger: AGAAACCGGGATGAAGGCTCATACCATGTGGACGAG...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCCTCGTCCACATGGTATaGGCCTTCATCCCGGTTTCT +
Preference number: 4 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCLVHMV*AFIPVS
Trigger: AGAAACCGGGATGAAGGCTCATACCATGTGGACGAG...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACGCCGATTTCCCAGTGTaGAGCATCAGTCCATTCCTC +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHADFPV*SISPFL
Trigger: GAGGAATGGACTGATGCTTCACACTGGGAAATCGGC...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCGACAGAAATGGTACCTaGCCGTCCGTCTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCDRNGT*PSVSLE
Trigger: TTCCAGAGAGACGGACGGTCAGGTACCATTTCTGTC...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACCAGCCTCCGTATGCATaGCTACGGGGAGCTGAATTT +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHQPPYA*LRGAEF
Trigger: AAATTCAGCTCCCCGTAGTCATGCATACGGAGGCTG...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCCAGCCTCCGTATGCATaGCTACGGGGAGCTGAATTT +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLQPPYA*LRGAEF
Trigger: AAATTCAGCTCCCCGTAGTCATGCATACGGAGGCTG...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTAAAGAGCATCGGAGATaGGGTCCGGAAGCCGTCCAT +
Preference number: 4 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVKEHRR*GPEAVH
Trigger: ATGGACGGCTTCCGGACCTCATCTCCGATGCTCTTT...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTGCTCGAGCCAGAGCCTaGAGCATGCATCGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGARARA*SMHRSK
Trigger: CTTTGACCGATGCATGCTTCAGGCTCTGGCTCGAGC...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR TCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTCCAACTGGAAAACGTTaGCCCCAGTGGTACAGGGTA +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVPTGKR*PQWYRV
Trigger: TACCCTGTACCACTGGGGTCAACGTTTTCCAGTTGG...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR TCA 90 bp CACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCGGGCGCTGCGAGTCTTaGGCTGGAAGCTCATCTCGC +
Preference number: 4 (lower is better)
Translates to: HFVPVSQHFHSVIHSNLPGRCES*AGSSSR
Trigger: GCGAGATGAGCTTCCAGCTCAAGACTCGCAGCGCCC...GGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR TCA 90 bp TGTTTAATTCATTGTGATTCTGCCAGCCCACAGCAGTGGTCTCTAACATGTCTCGGGCGCTGCGAGTCTTaGGCTGGAAGCTCATCTCGC +
Preference number: 4 (lower is better)
Translates to: CLIHCDSASPQQWSLTCLGRCES*AGSSSR
Trigger: GCGAGATGAGCTTCCAGCTCAAGACTCGCAGCGCCC...GAGACATGTTAGAGACCACTGCTGTGGGCTGGCAGAATCACAATGAATTAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR TCA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCAGAAGATGGAGAAGCTaGGCTGCAGGCGGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: LQQPELRCRLTNFASITCRRWRS*AAGGRR
Trigger: GCGGCGGCCGCCTGCAGCTCAGCTTCTCCATCTTCT...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCGACGAAAAGGCCGCTaGACACCGTCATGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHRRKGR*TPSCPC
Trigger: GCAGGGACATGACGGTGTTCAGCGGCCTTTTCGTCG...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp CACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCCACGAATCCACCCCTTaGAGGGCTCCCGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: HFVPVSQHFHSVIHSNLPHESTP*RAPAPS
Trigger: TGAGGGAGCGGGAGCCCTTCAAGGGGTGGATTCGTG...GGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR TCA 90 bp TGTTTAATTCATTGTGATTCTGCCAGCCCACAGCAGTGGTCTCTAACATGTCTCCACGAATCCACCCCTTaGAGGGCTCCCGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: CLIHCDSASPQQWSLTCLHESTP*RAPAPS
Trigger: TGAGGGAGCGGGAGCCCTTCAAGGGGTGGATTCGTG...GAGACATGTTAGAGACCACTGCTGTGGGCTGGCAGAATCACAATGAATTAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
CDS-3UTR TCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTGGACCTGCGAGGAGTTaGCCCTCACGTCACGAATCC +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSGPARS*PSRHES
Trigger: GGATTCGTGACGTGAGGGTCAACTCCTCGCAGGTCC...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAAAGCACACACCTCCGTTaGGGCACACCCCGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: FVPVSQHFHSVIHSNLPKSTHLR*GTPRPR
Trigger: GCGAGGGCGGGGTGTGCCTCAACGGAGGTGTGTGCT...TTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR TCA 90 bp TGCAGCCATATAATTTGCAAGCATTTGCCCATCCTTTGCAGTGATGGTTTGAAAAGCACACACCTCCGTTaGGGCACACCCCGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: CSHIICKHLPILCSDGLKSTHLR*GTPRPR
Trigger: GCGAGGGCGGGGTGTGCCTCAACGGAGGTGTGTGCT...TTTCAAACCATCACTGCAAAGGATGGGCAAATGCTTGCAAATTATATGGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496792.3
CDS-3UTR TCA 90 bp TCTGAATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTAGCACACACCTCCGTTaGGGCACACCCCGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: SEFLLHFVPVSQHFHSVISTHLR*GTPRPR
Trigger: GCGAGGGCGGGGTGTGCCTCAACGGAGGTGTGTGCT...AATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR TCA 90 bp TTCAGAATAAACCAAGTACATCACTGCTTACCAACAGCACCTATGGCTAACAGTAGCACACACCTCCGTTaGGGCACACCCCGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: FRINQVHHCLPTAPMANSSTHLR*GTPRPR
Trigger: GCGAGGGCGGGGTGTGCCTCAACGGAGGTGTGTGCT...ACTGTTAGCCATAGGTGCTGTTGGTAAGCAGTGATGTACTTGGTTTATTCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR TCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTCGGGTGCTGTCCTTCTaGAAGAGAAGGGCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCRVLSF*KRRAEL
Trigger: CAGCTCCGCCCTTCTCTTTCAGAAGGACAGCACCCG...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404971.5
ENST00000406316.6
CDS-3UTR TCA 90 bp ACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGGTAACACACGGTCTGCGGCTGTaGGTTAAGGGGATCCAGTAT +
Preference number: 4 (lower is better)
Translates to: TVCGCELRGSSIARVEVTHGLRL*VKGIQY
Trigger: ATACTGGATCCCCTTAACTCACAGCCGCAGACCGTG...TGTTACCTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTGGAAGGGCTGGCCCTaGTCTTTCCCGCCAATTATT +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHWKGWP*SFPPII
Trigger: AATAATTGGCGGGAAAGAGCAGGGCCAGCCCTTCCA...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCTGGAAGGGCTGGCCCTaGTCTTTCCCGCCAATTATT +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLWKGWP*SFPPII
Trigger: AATAATTGGCGGGAAAGAGCAGGGCCAGCCCTTCCA...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTAACCACTGCTCCAGTTaGACCAGGCGGCAAACTCTT +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVNHCSS*TRRQTL
Trigger: AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTT...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAACCACTGCTCCAGTTaGACCAGGCGGCAAACTCTT +
Preference number: 4 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCNHCSS*TRRQTL
Trigger: AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTT...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTCCTCTTGGCAGGTTGTaGTGGGCCCTTCACATCCTC +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGPLGRL*WALHIL
Trigger: GAGGATGTGAAGGGCCCAGCACAACCTGCCAAGAGG...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTGGCCTATCAGTGCCCTaGACACAGATGGGCGAGAAA +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGGLSVP*TQMGEK
Trigger: TTTCTCGCCCATCTGTGTGCAGGGCACTGATAGGCC...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378262.7
ENST00000412315.5
CDS-3UTR GCA 90 bp ATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCGAAACTCCAGCCCGCTaGCCAGCTCCGCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: IPTSLCTSLTALPFCHSFETPAR*PAPPSS
Trigger: GCTGCTGGGCGGAGCTGGGCAGCGGGCTGGAGTTTC...GAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR GCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAACTTGGCTGCAGTCCTTaGCGCGGAAGCCGGTTCGCG +
Preference number: 4 (lower is better)
Translates to: AVVLLCFMNACGHHCLLELGCSP*RGSRFA
Trigger: CGCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAG...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp CAACAGATGGCACAAGGTGGGGATATTCACATAAGACAGACTTGGATTGATGTTCTTGGCTGCAGTCCTTaGCGCGGAAGCCGGTTCGCG +
Preference number: 4 (lower is better)
Translates to: QQMAQGGDIHIRQTWIDVLGCSP*RGSRFA
Trigger: CGCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAG...AACATCAATCCAAGTCTGTCTTATGTGAATATCCCCACCTTGTGCCATCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR GCA 90 bp CAGATGGCACAAGGTGGGGATATTCACATAAGACAGACTTGGATTGATGTTATGCTTGGCTGCAGTCCTTaGCGCGGAAGCCGGTTCGCG +
Preference number: 4 (lower is better)
Translates to: QMAQGGDIHIRQTWIDVMLGCSP*RGSRFA
Trigger: CGCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAG...CATAACATCAATCCAAGTCTGTCTTATGTGAATATCCCCACCTTGTGCCATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR GCA 90 bp GAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGTGGCTAGGGCAGGTGTaGTCCAGAGCTGAATATTTG +
Preference number: 4 (lower is better)
Translates to: EPGSKISLDTDCVSPWSWWLGQV*SRAEYL
Trigger: CAAATATTCAGCTCTGGAGCACACCTGCCCTAGCCA...CCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS-3UTR CCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCACGAGGCGAATGCAGCTaGAGAGGGGCTTGTCCGGAA +
Preference number: 4 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSRGECS*RGACPE
Trigger: TTCCGGACAAGCCCCTCTCCAGCTGCATTCGCCTCG...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR CCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAATGTCCACCTGCAACGTaGCATTGCCACCACTCCTCG +
Preference number: 4 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKCPPAT*HCHHSS
Trigger: CGAGGAGTGGTGGCAATGCCACGTTGCAGGTGGACA...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAATACAGCCCAGAGAGCTaGCCCTGGAAGGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEYSPES*PWKGWP
Trigger: GGGCCAGCCCTTCCAGGGCCAGCTCTCTGGGCTGTA...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
ENST00000637906.1
CDS-3UTR CCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCATACAGCCCAGAGAGCTaGCCCTGGAAGGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAYSPES*PWKGWP
Trigger: GGGCCAGCCCTTCCAGGGCCAGCTCTCTGGGCTGTA...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp CTGCTGGGTTGTTTCTCCTTTACAACAGCCCCATTGGACTGTGCTGAGTTACTGCGACTCTCGTCCACATaGTATGAGCCTTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: LLGCFSFTTAPLDCAELLRLSST*YEPSSR
Trigger: CCGGGATGAAGGCTCATACCATGTGGACGAGAGTCG...CAGTAACTCAGCACAGTCCAATGGGGCTGTTGTAAAGGAGAAACAACCCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635519.1
ENST00000637906.1
CDS-3UTR CCA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCAGTCCACACCTCGGTaGGGAAGACAAGGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTQSTPR*GRQGQL
Trigger: AAGCTGGCCTTGTCTTCCCCACCGAGGTGTGGACTG...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCTCTTCTGTCATAGCATaGGCTTCAGCACCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLSSVIA*ASAPLQ
Trigger: CTGCAGCGGTGCTGAAGCCCATGCTATGACAGAAGA...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCTTCTGTCATAGCATaGGCTTCAGCACCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHSSVIA*ASAPLQ
Trigger: CTGCAGCGGTGCTGAAGCCCATGCTATGACAGAAGA...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp TTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCAAACAGCCCCCGCGCTaGAGCAGCGCCGTCCCCATG +
Preference number: 4 (lower is better)
Translates to: FTLYQSHSTSILSFILTCKQPPR*SSAVPM
Trigger: CATGGGGACGGCGCTGCTCCAGCGCGGGGGCTGTTT...GCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR CCA 90 bp CCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATGTTTTGGGAAGCGCGTCCATTaGCCCTCGGCGCCCGGAAAC +
Preference number: 4 (lower is better)
Translates to: PVSQHFHSVIHSNLPKCFGKRVH*PSAPGN
Trigger: GTTTCCGGGCGCCGAGGGCCAATGGACGCGCTTCCC...AAAACATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCAGCAGGCGTTCCACTTaGGGAAGCGCGTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFSRRST*GSASIG
Trigger: GCCAATGGACGCGCTTCCCCAAGTGGAACGCCTGCT...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTAGCAGGCGTTCCACTTaGGGAAGCGCGTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSSRRST*GSASIG
Trigger: GCCAATGGACGCGCTTCCCCAAGTGGAACGCCTGCT...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTCTGCGAGTCTTGAGCTaGAAGCTCATCTCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLLRVLS*KLISLS
Trigger: CGAGAGCGAGATGAGCTTCCAGCTCAAGACTCGCAG...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTCTGCGAGTCTTGAGCTaGAAGCTCATCTCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGLRVLS*KLISLS
Trigger: CGAGAGCGAGATGAGCTTCCAGCTCAAGACTCGCAG...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp CAACAGATGGCACAAGGTGGGGATATTCACATAAGACAGACTTGGATTGATGTTGTGGTGTTGCGGAACTaGCGGCGGATGCGCACGCTG +
Preference number: 4 (lower is better)
Translates to: QQMAQGGDIHIRQTWIDVVVLRN*RRMRTL
Trigger: CAGCGTGCGCATCCGCCGCCAGTTCCGCAACACCAC...AACATCAATCCAAGTCTGTCTTATGTGAATATCCCCACCTTGTGCCATCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAGTGGTGTTGCGGAACTaGCGGCGGATGCGCACGCTG +
Preference number: 4 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEVVLRN*RRMRTL
Trigger: CAGCGTGCGCATCCGCCGCCAGTTCCGCAACACCAC...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACACAGGACGTGGTGTTGCGGAACTaGCGGCGGATGCGCACGCTG +
Preference number: 4 (lower is better)
Translates to: VTGSCALHRQIRYIATQDVVLRN*RRMRTL
Trigger: CAGCGTGCGCATCCGCCGCCAGTTCCGCAACACCAC...GTCCTGTGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAACACTTGGCCTCCACCTaGTCGATGAAGAGCGTGGTG +
Preference number: 4 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKHLAST*SMKSVV
Trigger: CACCACGCTCTTCATCGACCAGGTGGAGGCCAAGTG...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GACTTCCCAGCCTCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACTTCCCCCGCCGCTGTTaGGCGGCTCATCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: DFPASRRLRNKFLLLTSYFPRRC*AAHRPA
Trigger: AGCTGGACGATGAGCCGCCCAACAGCGGCGGGGGAA...GTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGAGGCTGGGAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CCA 90 bp GAAGAGGAACCTAATTCCTTCATAATGATCTATGAGCTGTTTCCCTCCCCCAATCAGTCGCACACGGCCTaGTCGTCCACCACGGAGCAC +
Preference number: 4 (lower is better)
Translates to: EEEPNSFIMIYELFPSPNQSHTA*SSTTEH
Trigger: GTGCTCCGTGGTGGACGACCAGGCCGTGTGCGACTG...ATTGGGGGAGGGAAACAGCTCATAGATCATTATGAAGGAATTAGGTTCCTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CCA 90 bp GTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACACAGGACCAGTCGCACACGGCCTaGTCGTCCACCACGGAGCAC +
Preference number: 4 (lower is better)
Translates to: VTGSCALHRQIRYIATQDQSHTA*SSTTEH
Trigger: GTGCTCCGTGGTGGACGACCAGGCCGTGTGCGACTG...GTCCTGTGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACACATTGTTGTCTTCTTaGCTGCAGTCCTTGCCGCGG +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHTLLSS*LQSLPR
Trigger: CCGCGGCAAGGACTGCAGCCAAGAAGACAACAATGT...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAAGGTGGGCTCGGCCCGTaGTCGCAGCCCCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKGGLGP*SQPLQV
Trigger: GACCTGGAGGGGCTGCGACCACGGGCCGAGCCCACC...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp TTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAACTCTCCGCAGTACCATaGAGAGCGGCGGGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: FVPVSQHFHSVIHSNLPKLSAVP*RAAGPS
Trigger: GGACGGGCCCGCCGCTCTCCATGGTACTGCGGAGAG...TTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS-3UTR CCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGGAAAAGGCGGTGGTaGAGCCTGAGAAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGRKRRW*SLRRLG
Trigger: ACCCAGCCTTCTCAGGCTCCACCACCGCCTTTTCCT...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp TCTATGAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTGCCAGCCCACAGCAGTaGTCTCTAACATGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SMNQEAKSHWTPTVSALGASPQQ*SLTCLQ
Trigger: CTGGAGACATGTTAGAGACCACTGCTGTGGGCTGGC...ACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTCATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
CDS-3UTR TCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTCGGCGGAAAGGCAGCTaGGAAGAAGATGCAGACGAA +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGRRKGS*EEDADE
Trigger: TTCGTCTGCATCTTCTTCTCAGCTGCCTTTCCGCCG...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR TCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAGAGTGCGCCCTTCTaGAGGAAGTGGGAATCGAAC +
Preference number: 4 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLKSAPF*RKWESN
Trigger: GTTCGATTCCCACTTCCTTCAGAAGGGCGCACTCTT...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR TCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTAAGAGTGCGCCCTTCTaGAGGAAGTGGGAATCGAAC +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGKSAPF*RKWESN
Trigger: GTTCGATTCCCACTTCCTTCAGAAGGGCGCACTCTT...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR TCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCGTCCTCACTTCTACATaGCAGACATCCACCGCGAAT +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLVLTST*QTSTAN
Trigger: ATTCGCGGTGGATGTCTGTCATGTAGAAGTGAGGAC...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR TCA 90 bp CCTGGTGCTGAAGCCTCAGATGCATTGAGAGCCAGTGTACTTTGTCTTTGCTCTTCGCAAGGATGCCGGTaGCCTGTAGATTGCAATAGG +
Preference number: 4 (lower is better)
Translates to: PGAEASDALRASVLCLCSSQGCR*PVDCNR
Trigger: CCTATTGCAATCTACAGGTCACCGGCATCCTTGCGA...AGAGCAAAGACAAAGTACACTGGCTCTCAATGCATCTGAGGCTTCAGCACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR TCA 90 bp TCATCTGTGGTCTGGCTAATGGGTTCTTTTGTCGGGGGCTTTCCTCTTCTGGCTGAGGCCACTTATACGTaGTTTGTCCACCACCTTTGC +
Preference number: 4 (lower is better)
Translates to: SSVVWLMGSFVGGFPLLAEATYT*FVHHLC
Trigger: GCAAAGGTGGTGGACAAATCACGTATAAGTGGCCTC...AGCCAGAAGAGGAAAGCCCCCGACAAAAGAACCCATTAGCCAGACCACAGATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR TCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTGTAGTCACCCAAGCCTaGAGAACTGTCCACTCGCAC +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGVVTQA*RTVHSH
Trigger: GTGCGAGTGGACAGTTCTTCAGGCTTGGGTGACTAC...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTGCTGGGACACTCTGCTaGGGCCACAAGGATGTCATC +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSAGTLC*GHKDVI
Trigger: GATGACATCCTTGTGGCCTCAGCAGAGTGTCCCAGC...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCAGCTGGGACACTCTGCTaGGGCCACAAGGATGTCATC +
Preference number: 4 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSAGTLC*GHKDVI
Trigger: GATGACATCCTTGTGGCCTCAGCAGAGTGTCCCAGC...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATGCTGGGACACTCTGCTaGGGCCACAAGGATGTCATC +
Preference number: 4 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHAGTLC*GHKDVI
Trigger: GATGACATCCTTGTGGCCTCAGCAGAGTGTCCCAGC...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
CDS-3UTR TCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCCCGGATCACTTCTGCTaGGCCTGGATACGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFPDHFC*AWIRLS
Trigger: AGAGAGCCGTATCCAGGCTCAGCAGAAGTGATCCGG...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTCTCGTCCACATGGTATaGGCCTTCATCCCGGTTTCT +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGLVHMV*AFIPVS
Trigger: AGAAACCGGGATGAAGGCTCATACCATGTGGACGAG...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp CCTGGTGCTGAAGCCTCAGATGCATTGAGAGCCAGTGTACTTTGTCTTTGCTCTCTCGTCCACATGGTATaGGCCTTCATCCCGGTTTCT +
Preference number: 4 (lower is better)
Translates to: PGAEASDALRASVLCLCSLVHMV*AFIPVS
Trigger: AGAAACCGGGATGAAGGCTCATACCATGTGGACGAG...AGAGCAAAGACAAAGTACACTGGCTCTCAATGCATCTGAGGCTTCAGCACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR TCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTCTCTGGCAATTGGACTaGCTTCTCAGGAAAGCGCTA +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVLWQLD*LLRKAL
Trigger: TAGCGCTTTCCTGAGAAGTCAGTCCAATTGCCAGAG...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTGCCGATTTCCCAGTGTaGAGCATCAGTCCATTCCTC +
Preference number: 4 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLADFPV*SISPFL
Trigger: GAGGAATGGACTGATGCTTCACACTGGGAAATCGGC...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GTGACCCTGGAAGGTCGGCTGTGCTGGGACTGCCTCCAACATAGAAAAAGTCATTGCTTCAAAGGCCCCTaGTCCCAAATTAATGACCAG +
Preference number: 4 (lower is better)
Translates to: VTLEGRLCWDCLQHRKSHCFKGP*SQINDQ
Trigger: CTGGTCATTAATTTGGGATCAGGGGCCTTTGAAGCA...ATGACTTTTTCTATGTTGGAGGCAGTCCCAGCACAGCCGACCTTCCAGGGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626249.2
CDS-3UTR TCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTGTTGTTACTGACTGGTaGCCCTGGAAGGTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGVVTDW*PWKVGC
Trigger: ACAGCCGACCTTCCAGGGTCACCAGTCAGTAACAAC...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTGATGCCAGGCAGCCTTaGAAGCCTTCTTTGGCATGT +
Preference number: 4 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLDARQP*KPSLAC
Trigger: ACATGCCAAAGAAGGCTTTCAAGGCTGCCTGGCATC...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp CTTCCCACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGATCCTTGGATGCTTGTaGATGCCTCAAGTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: LPTVCGCELRGSSIARVEILGCL*MPQVCL
Trigger: GAGACAGACTTGAGGCATTCACAAGCATCCAAGGAT...CTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGTGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR TCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAATGGTCCTGGACACCGTaGCGAAGAAATAAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKWSWTP*RRNKGP
Trigger: GGGACCCTTATTTCTTCGTCACGGTGTCCAGGACCA...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAGGGCGCTGCGAGTCTTaGGCTGGAAGCTCATCTCGC +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAGRCES*AGSSSR
Trigger: GCGAGATGAGCTTCCAGCTCAAGACTCGCAGCGCCC...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp CAGATGGCACAAGGTGGGGATATTCACATAAGACAGACTTGGATTGATGTTATGGGGCGCTGCGAGTCTTaGGCTGGAAGCTCATCTCGC +
Preference number: 4 (lower is better)
Translates to: QMAQGGDIHIRQTWIDVMGRCES*AGSSSR
Trigger: GCGAGATGAGCTTCCAGCTCAAGACTCGCAGCGCCC...CATAACATCAATCCAAGTCTGTCTTATGTGAATATCCCCACCTTGTGCCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR TCA 90 bp TTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATAGAAGATGGAGAAGCTaGGCTGCAGGCGGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: LYQSHSTSILSFILTCPNRRWRS*AAGGRR
Trigger: GCGGCGGCCGCCTGCAGCTCAGCTTCTCCATCTTCT...ATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR TCA 90 bp TTCAGAATAAACCAAGTACATCACTGCTTACCAACAGCACCTATGGCTAACAGTAGAAGATGGAGAAGCTaGGCTGCAGGCGGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: FRINQVHHCLPTAPMANSRRWRS*AAGGRR
Trigger: GCGGCGGCCGCCTGCAGCTCAGCTTCTCCATCTTCT...ACTGTTAGCCATAGGTGCTGTTGGTAAGCAGTGATGTACTTGGTTTATTCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR TCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTACCCTGCGCTTGGACTTaGCCTCCACCCACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLPCAWT*PPPTWP
Trigger: AGGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGG...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTAGAGAAGGGCGGAGCTaGGCTCTCCGCAGTACCATG +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTREGRS*ALRSTM
Trigger: CATGGTACTGCGGAGAGCTCAGCTCCGCCCTTCTCT...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404971.5
ENST00000406316.6
CDS-3UTR TCA 90 bp CACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAGAGAAGGGCGGAGCTaGGCTCTCCGCAGTACCATG +
Preference number: 4 (lower is better)
Translates to: HFVPVSQHFHSVIHSNLPREGRS*ALRSTM
Trigger: CATGGTACTGCGGAGAGCTCAGCTCCGCCCTTCTCT...GGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS-3UTR TCA 90 bp CTTCCCACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGAGGGCAGAGCCTTTATaGATGGGATTGCTGTCCTTA +
Preference number: 4 (lower is better)
Translates to: LPTVCGCELRGSSIARVERAEPL*MGLLSL
Trigger: TAAGGACAGCAATCCCATTCATAAAGGCTCTGCCCT...CTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGTGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp ACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGGTAACATCCGAACCCACAAAATaGCGGATTAGGAGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: TVCGCELRGSSIARVEVTSEPTK*RIRRGG
Trigger: TCCCCCTCTCCTAATCCGTCATTTTGTGGGTTCGGA...TGTTACCTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGCGCGGAGCGGGTGGCTaGTCCCAGATTTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTERGAGG*SQISRA
Trigger: AGCCCTGGAAATCTGGGAGCAGCCACCCGCTCCGCG...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342183.9
CDS-3UTR GCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCACATAGCCGAGGCGAATaGAGCTGGAGAGGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSHSRGE*SWRGAC
Trigger: ACAAGCCCCTCTCCAGCTGCATTCGCCTCGGCTATG...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR GCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCTCCTGGAGTCCGCCGTaGCTAGCACCCCAAACAATC +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFSWSPP*LAPQTI
Trigger: GATTGTTTGGGGTGCTAGGCACGGCGGACTCCAGGA...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR GCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTAAATGGTGGATGTGGTaGGCTCCCAAACTGGATGCC +
Preference number: 4 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVKWWMW*APKLDA
Trigger: GGCATCCAGTTTGGGAGCGCACCACATCCACCATTT...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR GCA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTTATGGCCAGTCTGTCTaGTCGTGTACTGGGTCGGTC +
Preference number: 4 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTYGQSV*SCTGSV
Trigger: GACCGACCCAGTACACGAGCAGACAGACTGGCCATA...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTGGAAGGGCTGGCCCTaGTCTTTCCCGCCAATTATT +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGWKGWP*SFPPII
Trigger: AATAATTGGCGGGAAAGAGCAGGGCCAGCCCTTCCA...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp CTGCTGGGTTGTTTCTCCTTTACAACAGCCCCATTGGACTGTGCTGAGTTACTGTGGAAGGGCTGGCCCTaGTCTTTCCCGCCAATTATT +
Preference number: 4 (lower is better)
Translates to: LLGCFSFTTAPLDCAELLWKGWP*SFPPII
Trigger: AATAATTGGCGGGAAAGAGCAGGGCCAGCCCTTCCA...CAGTAACTCAGCACAGTCCAATGGGGCTGTTGTAAAGGAGAAACAACCCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR GCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAACTGGATACGGCTCTCTaGCGCCTGCTCGGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: AVVLLCFMNACGHHCLLELDTAL*RLLGLG
Trigger: ACCCAACCCGAGCAGGCGGCAGAGAGCCGTATCCAG...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
CDS-3UTR GCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCGCAAGTTCCAACCACTaGTCCAGTTGCACCAGGCGG +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFASSNH*SSCTRR
Trigger: CCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGC...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCCGGCTGTGCTGGGACTaGCTCCAACATAGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLRLCWD*LQHRKS
Trigger: ACTTTTTCTATGTTGGAGGCAGTCCCAGCACAGCCG...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTTTTTCTCTCTGCCTCTaGAGGGCCAAGCTAAGATGC +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVFSLCL*RAKLRC
Trigger: GCATCTTAGCTTGGCCCTGCAGAGGCAGAGAGAAAA...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR GCA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCTTTTCTCTCTGCCTCTaGAGGGCCAAGCTAAGATGC +
Preference number: 4 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCFSLCL*RAKLRC
Trigger: GCATCTTAGCTTGGCCCTGCAGAGGCAGAGAGAAAA...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR GCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTGGGCTTCAGCACCGCTaGAGCCAAAGCCTAATTCCT +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGGLQHR*SQSLIP
Trigger: AGGAATTAGGCTTTGGCTGCAGCGGTGCTGAAGCCC...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR GCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAGGGCTTCAGCACCGCTaGAGCCAAAGCCTAATTCCT +
Preference number: 4 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKGLQHR*SQSLIP
Trigger: AGGAATTAGGCTTTGGCTGCAGCGGTGCTGAAGCCC...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR GCA 90 bp AATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTATGGAGAAGCTGAGCTaGAGGCGGCCGCCGCGCGTC +
Preference number: 4 (lower is better)
Translates to: NSYFTLYQSHSTSILSFIMEKLS*RRPPRV
Trigger: GACGCGCGGCGGCCGCCTGCAGCTCAGCTTCTCCAT...AATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR GCA 90 bp ACATGTCTCCAGCTGACTTCGCCATTTTTGTCATGTACACATGATAAGGGATTTCGGATGCGCACGCTGTaGCAGGCGCCGTCGTTAACC +
Preference number: 4 (lower is better)
Translates to: TCLQLTSPFLSCTHDKGFRMRTL*QAPSLT
Trigger: GGTTAACGACGGCGCCTGGCACAGCGTGCGCATCCG...AAATCCCTTATCATGTGTACATGACAAAAATGGCGAAGTCAGCTGGAGACATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR GCA 90 bp TCTGAATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCGGATGCGCACGCTGTaGCAGGCGCCGTCGTTAACC +
Preference number: 4 (lower is better)
Translates to: SEFLLHFVPVSQHFHSVIRMRTL*QAPSLT
Trigger: GGTTAACGACGGCGCCTGGCACAGCGTGCGCATCCG...AATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGGAACTGGCGGCGGATaGGCACGCTGTGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKGTGGG*ARCARR
Trigger: GCGCCTGGCACAGCGTGCGCATCCGCCGCCAGTTCC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAAGGAACTGGCGGCGGATaGGCACGCTGTGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKGTGGG*ARCARR
Trigger: GCGCCTGGCACAGCGTGCGCATCCGCCGCCAGTTCC...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCATCCACGGGCAGGACCTaGGAGGAGTTGACCCTCACG +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLASTGRT*EELTLT
Trigger: CGTGAGGGTCAACTCCTCGCAGGTCCTGCCCGTGGA...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp CAACAGATGGCACAAGGTGGGGATATTCACATAAGACAGACTTGGATTGATGTTTCCACGGGCAGGACCTaGGAGGAGTTGACCCTCACG +
Preference number: 4 (lower is better)
Translates to: QQMAQGGDIHIRQTWIDVSTGRT*EELTLT
Trigger: CGTGAGGGTCAACTCCTCGCAGGTCCTGCCCGTGGA...AACATCAATCCAAGTCTGTCTTATGTGAATATCCCCACCTTGTGCCATCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR GCA 90 bp GACTTCCCAGCCTCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACTCCACGGGCAGGACCTaGGAGGAGTTGACCCTCACG +
Preference number: 4 (lower is better)
Translates to: DFPASRRLRNKFLLLTSYSTGRT*EELTLT
Trigger: CGTGAGGGTCAACTCCTCGCAGGTCCTGCCCGTGGA...GTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGAGGCTGGGAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp ATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCCTTGGCTGCAGTCCTTaGCGCGGAAGCCGGTTCGCG +
Preference number: 4 (lower is better)
Translates to: IPTSLCTSLTALPFCHSFLGCSP*RGSRFA
Trigger: CGCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAG...GAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR GCA 90 bp ATTTGCAGCCATATAATTTGCAAGCATTTGCCCATCCTTTGCAGTGATGGTTTGCTTGGCTGCAGTCCTTaGCGCGGAAGCCGGTTCGCG +
Preference number: 4 (lower is better)
Translates to: ICSHIICKHLPILCSDGLLGCSP*RGSRFA
Trigger: CGCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAG...CAAACCATCACTGCAAAGGATGGGCAAATGCTTGCAAATTATATGGCTGCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496792.3
CDS-3UTR GCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAATCCAGGTCTGGATGCTaGGGAGCGAGGTGCTTTTAC +
Preference number: 4 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKSRSGC*GARCFY
Trigger: GTAAAAGCACCTCGCTCCGCAGCATCCAGACCTGGA...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406316.6
CDS-3UTR GCA 90 bp TGCAGCCATATAATTTGCAAGCATTTGCCCATCCTTTGCAGTGATGGTTTGAAAGCGCCAGACCTTGGCTaGAGTCCTTGCCGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: CSHIICKHLPILCSDGLKAPDLG*SPCRGS
Trigger: GCTTCCGCGGCAAGGACTGCAGCCAAGGTCTGGCGC...TTTCAAACCATCACTGCAAAGGATGGGCAAATGCTTGCAAATTATATGGCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496792.3
CDS-3UTR GCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTGTTTTCCACATGGTCTaGTTTGTCCCTGAGCTCGGC +
Preference number: 4 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLVFHMV*FVPELG
Trigger: GCCGAGCTCAGGGACAAAGCAGACCATGTGGAAAAC...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635519.1
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGCATCCTCTGGTACATaGCGGGGCGCCCGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKASSGT*RGARRG
Trigger: CCCTCGGCGGGCGCCCCGCCATGTACCAGAGGATGC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000611589.4
ENST00000628364.2
CDS-3UTR CCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTTGGAAATGGTGGATGTaGTGCGCTCCCAAACTGGAT +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVWKWWM*CAPKLD
Trigger: ATCCAGTTTGGGAGCGCACCACATCCACCATTTCCA...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR CCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGCTGCCATGGAAATaGTGGATGTGGTGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSLLPWK*WMWCAP
Trigger: GGGAGCGCACCACATCCACCATTTCCATGGCAGCAG...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR CCA 90 bp TCCCACTATGGCGATGTTGGCATCGTTTTCGGCTGCCATATTCAGAACTTTCAATGTCCACCTGCAACGTaGCATTGCCACCACTCCTCG +
Preference number: 4 (lower is better)
Translates to: SHYGDVGIVFGCHIQNFQCPPAT*HCHHSS
Trigger: CGAGGAGTGGTGGCAATGCCACGTTGCAGGTGGACA...TTGAAAGTTCTGAATATGGCAGCCGAAAACGATGCCAACATCGCCATAGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR CCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTCCACTATGGCGATGTTaGCATCGTTTTCGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVPLWRC*HRFRLP
Trigger: TGGCAGCCGAAAACGATGCCAACATCGCCATAGTGG...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GTTGACTCAGTTGTCATAGAGGAAGGCACTTCACCAACCAGTCTCACATTTCCCCGACTCTCGTCCACATaGTATGAGCCTTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: VDSVVIEEGTSPTSLTFPRLSST*YEPSSR
Trigger: CCGGGATGAAGGCTCATACCATGTGGACGAGAGTCG...GGGAAATGTGAGACTGGTTGGTGAAGTGCCTTCCTCTATGACAACTGAGTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR CCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACATGCCATATGCACGCTaGGATCGGAACCGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHMPYAR*DRNRKE
Trigger: TTCCTTACGGTTCCGATCCCAGCGTGCATATGGCAT...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCATGCCATATGCACGCTaGGATCGGAACCGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLMPYAR*DRNRKE
Trigger: TTCCTTACGGTTCCGATCCCAGCGTGCATATGGCAT...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGTGTCTCCTTCAGATGTaGTGTCTTACAGCAGAACGG +
Preference number: 4 (lower is better)
Translates to: EPGSKISLDTDCVSPWSWCLLQM*CLTAER
Trigger: CCGTTCTGCTGTAAGACACCACATCTGAAGGAGACA...CCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR CCA 90 bp CTTCCCACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGTGTCTCCTTCAGATGTaGTGTCTTACAGCAGAACGG +
Preference number: 4 (lower is better)
Translates to: LPTVCGCELRGSSIARVECLLQM*CLTAER
Trigger: CCGTTCTGCTGTAAGACACCACATCTGAAGGAGACA...CTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGTGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR CCA 90 bp TCTGAATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTGTGGTGTTGCGGAACTaGCGGCGGATGCGCACGCTG +
Preference number: 4 (lower is better)
Translates to: SEFLLHFVPVSQHFHSVIVVLRN*RRMRTL
Trigger: CAGCGTGCGCATCCGCCGCCAGTTCCGCAACACCAC...AATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCACTTGGCCTCCACCTaGTCGATGAAGAGCGTGGTG +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSHLAST*SMKSVV
Trigger: CACCACGCTCTTCATCGACCAGGTGGAGGCCAAGTG...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp CCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATGTTTTTTCCCCCGCCGCTGTTaGGCGGCTCATCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PVSQHFHSVIHSNLPKCFFPRRC*AAHRPA
Trigger: AGCTGGACGATGAGCCGCCCAACAGCGGCGGGGGAA...AAAACATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CCA 90 bp TTCAGAATAAACCAAGTACATCACTGCTTACCAACAGCACCTATGGCTAACAGTTTCCCCCGCCGCTGTTaGGCGGCTCATCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: FRINQVHHCLPTAPMANSFPRRC*AAHRPA
Trigger: AGCTGGACGATGAGCCGCCCAACAGCGGCGGGGGAA...ACTGTTAGCCATAGGTGCTGTTGGTAAGCAGTGATGTACTTGGTTTATTCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CCA 90 bp TCTGAATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTTTCCCCCGCCGCTGTTaGGCGGCTCATCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SEFLLHFVPVSQHFHSVIFPRRC*AAHRPA
Trigger: AGCTGGACGATGAGCCGCCCAACAGCGGCGGGGGAA...AATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CCA 90 bp AGCCATATAATTTGCAAGCATTTGCCCATCCTTTGCAGTGATGGTTTGAAAGCACAGTCGCACACGGCCTaGTCGTCCACCACGGAGCAC +
Preference number: 4 (lower is better)
Translates to: SHIICKHLPILCSDGLKAQSHTA*SSTTEH
Trigger: GTGCTCCGTGGTGGACGACCAGGCCGTGTGCGACTG...TGCTTTCAAACCATCACTGCAAAGGATGGGCAAATGCTTGCAAATTATATGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496792.3
CDS-3UTR CCA 90 bp TTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAACAGTCGCACACGGCCTaGTCGTCCACCACGGAGCAC +
Preference number: 4 (lower is better)
Translates to: FVPVSQHFHSVIHSNLPKQSHTA*SSTTEH
Trigger: GTGCTCCGTGGTGGACGACCAGGCCGTGTGCGACTG...TTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTACATTGTTGTCTTCTTaGCTGCAGTCCTTGCCGCGG +
Preference number: 4 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVTLLSS*LQSLPR
Trigger: CCGCGGCAAGGACTGCAGCCAAGAAGACAACAATGT...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp AATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTTGGCTGGGGAATGGGTaGGCTCGGCCCGTGGTCGCA +
Preference number: 4 (lower is better)
Translates to: NSYFTLYQSHSTSILSFIWLGNG*ARPVVA
Trigger: TGCGACCACGGGCCGAGCCCACCCATTCCCCAGCCA...AATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS-3UTR CCA 90 bp TCTGAATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCCTTTGGCTGGGGAATaGGTGGGCTCGGCCCGTGGT +
Preference number: 4 (lower is better)
Translates to: SEFLLHFVPVSQHFHSVIPLAGE*VGSARG
Trigger: ACCACGGGCCGAGCCCACCCATTCCCCAGCCAAAGG...AATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS-3UTR CCA 90 bp AATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTGGCCCGTCCTTTGGCTaGGGAATGGGTGGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: NSYFTLYQSHSTSILSFIGPSFG*GMGGLG
Trigger: GCCGAGCCCACCCATTCCCCAGCCAAAGGACGGGCC...AATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS-3UTR CCA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTGGAGAGGGAAAGAGCTaGGAAGGAAAAGGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTGEGKS*EGKGGG
Trigger: ACCACCGCCTTTTCCTTCCCAGCTCTTTCCCTCTCC...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp TGCAGCCATATAATTTGCAAGCATTTGCCCATCCTTTGCAGTGATGGTTTGAAAAGGTGCGCCAGACCTTaGCTGCAGTCCTTGCCGCGG +
Preference number: 4 (lower is better)
Translates to: CSHIICKHLPILCSDGLKRCARP*LQSLPR
Trigger: CCGCGGCAAGGACTGCAGCCAAGGTCTGGCGCACCT...TTTCAAACCATCACTGCAAAGGATGGGCAAATGCTTGCAAATTATATGGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496792.3
3UTR CAA 72 bp AATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTaGGACTTCCCAGCCTCCAGACGTTTGAGAAATAAG +
Preference number: 4 (lower is better)
Translates to: NLTGHRLCQPLV*DFPASRRLRNK
Trigger: CTTATTTCTCAAACGTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTTCGCAAGGATGCCGGTaGCCTGTAGATTGCAATAGG +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGSQGCR*PVDCNR
Trigger: CCTATTGCAATCTACAGGTCACCGGCATCCTTGCGA...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR TCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTGAGGCCACTTATACGTaGTTTGTCCACCACCTTTGC +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGEATYT*FVHHLC
Trigger: GCAAAGGTGGTGGACAAATCACGTATAAGTGGCCTC...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTGAGGCCACTTATACGTaGTTTGTCCACCACCTTTGC +
Preference number: 4 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVEATYT*FVHHLC
Trigger: GCAAAGGTGGTGGACAAATCACGTATAAGTGGCCTC...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TTTTTCCCTGGTGCTGAAGCCTCAGATGCATTGAGAGCCAGTGTACTTTGTCTTGTAGTCACCCAAGCCTaGAGAACTGTCCACTCGCAC +
Preference number: 4 (lower is better)
Translates to: FFPGAEASDALRASVLCLVVTQA*RTVHSH
Trigger: GTGCGAGTGGACAGTTCTTCAGGCTTGGGTGACTAC...AAGACAAAGTACACTGGCTCTCAATGCATCTGAGGCTTCAGCACCAGGGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR TCA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCTGCCACCACTCCTCGTaGAACGAACTACATGGTATT +
Preference number: 4 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCCHHSS*NELHGI
Trigger: AATACCATGTAGTTCGTTTCACGAGGAGTGGTGGCA...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCCCGGATCACTTCTGCTaGGCCTGGATACGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SMKQITPFVINTLAQPSSPDHFC*AWIRLS
Trigger: AGAGAGCCGTATCCAGGCTCAGCAGAAGTGATCCGG...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAACTCGTCCACATGGTATaGGCCTTCATCCCGGTTTCT +
Preference number: 4 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKLVHMV*AFIPVS
Trigger: AGAAACCGGGATGAAGGCTCATACCATGTGGACGAG...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTTGCTTCAAAGGCCCCTaGTCCCAAATTAATGACCAG +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVCFKGP*SQINDQ
Trigger: CTGGTCATTAATTTGGGATCAGGGGCCTTTGAAGCA...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATGTTGTTACTGACTGGTaGCCCTGGAAGGTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHVVTDW*PWKVGC
Trigger: ACAGCCGACCTTCCAGGGTCACCAGTCAGTAACAAC...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTGCTTGGCATCTTTCTaGTGTCTTGGCTTGCCATGG +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGCLASF*CLGLPW
Trigger: CCATGGCAAGCCAAGACATCAGAAAGATGCCAAGCA...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAGACAGAAATGGTACCTaGCCGTCCGTCTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKDRNGT*PSVSLE
Trigger: TTCCAGAGAGACGGACGGTCAGGTACCATTTCTGTC...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATAAAGAGCATCGGAGATaGGGTCCGGAAGCCGTCCAT +
Preference number: 4 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHKEHRR*GPEAVH
Trigger: ATGGACGGCTTCCGGACCTCATCTCCGATGCTCTTT...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCAAAAGAGCATCGGAGATaGGGTCCGGAAGCCGTCCAT +
Preference number: 4 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSKEHRR*GPEAVH
Trigger: ATGGACGGCTTCCGGACCTCATCTCCGATGCTCTTT...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGTCAAAGCGAATTTCCTaGGGTCTATGGATAAGGCGA +
Preference number: 4 (lower is better)
Translates to: EPGSKISLDTDCVSPWSWSKRIS*GLWIRR
Trigger: TCGCCTTATCCATAGACCTCAGGAAATTCGCTTTGA...CCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR TCA 90 bp GTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATGTTTTCATAGAAGATGGAGAAGCTaGGCTGCAGGCGGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: VSQHFHSVIHSNLPKCFHRRWRS*AAGGRR
Trigger: GCGGCGGCCGCCTGCAGCTCAGCTTCTCCATCTTCT...ATGAAAACATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR TCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCACCTCCACCTGGTCGATaGAGAGCGTGGTGTTGCGGA +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAPPPGR*RAWCCG
Trigger: TCCGCAACACCACGCTCTTCATCGACCAGGTGGAGG...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp ATATGCACCAAACACAGGCATTTCAACAGTAAGGGTCTGTCAACATTCACAAACCCCTGCGCTTGGACTTaGCCTCCACCCACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: ICTKHRHFNSKGLSTFTNPCAWT*PPPTWP
Trigger: AGGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGG...GTTTGTGAATGTTGACAGACCCTTACTGTTGAAATGCCTGTGTTTGGTGCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTACGACGAAAAGGCCGCTaGACACCGTCATGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLRRKGR*TPSCPC
Trigger: GCAGGGACATGACGGTGTTCAGCGGCCTTTTCGTCG...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACACAGGACCGACGAAAAGGCCGCTaGACACCGTCATGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: VTGSCALHRQIRYIATQDRRKGR*TPSCPC
Trigger: GCAGGGACATGACGGTGTTCAGCGGCCTTTTCGTCG...GTCCTGTGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp CAGATGGCACAAGGTGGGGATATTCACATAAGACAGACTTGGATTGATGTTATGCGACGAAAAGGCCGCTaGACACCGTCATGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: QMAQGGDIHIRQTWIDVMRRKGR*TPSCPC
Trigger: GCAGGGACATGACGGTGTTCAGCGGCCTTTTCGTCG...CATAACATCAATCCAAGTCTGTCTTATGTGAATATCCCCACCTTGTGCCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR TCA 90 bp GACTTCCCAGCCTCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACCGACGAAAAGGCCGCTaGACACCGTCATGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: DFPASRRLRNKFLLLTSYRRKGR*TPSCPC
Trigger: GCAGGGACATGACGGTGTTCAGCGGCCTTTTCGTCG...GTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGAGGCTGGGAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp ATATGCACCAAACACAGGCATTTCAACAGTAAGGGTCTGTCAACATTCACAAACCACGAATCCACCCCTTaGAGGGCTCCCGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: ICTKHRHFNSKGLSTFTNHESTP*RAPAPS
Trigger: TGAGGGAGCGGGAGCCCTTCAAGGGGTGGATTCGTG...GTTTGTGAATGTTGACAGACCCTTACTGTTGAAATGCCTGTGTTTGGTGCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp GAAGAGGAACCTAATTCCTTCATAATGATCTATGAGCTGTTTCCCTCCCCCAATGGACCTGCGAGGAGTTaGCCCTCACGTCACGAATCC +
Preference number: 4 (lower is better)
Translates to: EEEPNSFIMIYELFPSPNGPARS*PSRHES
Trigger: GGATTCGTGACGTGAGGGTCAACTCCTCGCAGGTCC...ATTGGGGGAGGGAAACAGCTCATAGATCATTATGAAGGAATTAGGTTCCTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAGCACACACCTCCGTTaGGGCACACCCCGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKSTHLR*GTPRPR
Trigger: GCGAGGGCGGGGTGTGCCTCAACGGAGGTGTGTGCT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGAAGATTGTGAGCTaGCGCCCTTTGTCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGLKIVS*RPLSSS
Trigger: GCTACTCGACAAAGGGCGTCAGCTCACAATCTTCAA...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000625672.2
CDS-3UTR TCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTTGAAGATTGTGAGCTaGCGCCCTTTGTCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVLKIVS*RPLSSS
Trigger: GCTACTCGACAAAGGGCGTCAGCTCACAATCTTCAA...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000625672.2
CDS-3UTR TCA 90 bp CAGATGGCACAAGGTGGGGATATTCACATAAGACAGACTTGGATTGATGTTATGCGGGTGCTGTCCTTCTaGAAGAGAAGGGCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: QMAQGGDIHIRQTWIDVMRVLSF*KRRAEL
Trigger: CAGCTCCGCCCTTCTCTTTCAGAAGGACAGCACCCG...CATAACATCAATCCAAGTCTGTCTTATGTGAATATCCCCACCTTGTGCCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS-3UTR TCA 90 bp GAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGTTTAAAATGGACAGTTaGAACCACCGCCCCCAAACA +
Preference number: 4 (lower is better)
Translates to: EPGSKISLDTDCVSPWSWFKMDS*NHRPQT
Trigger: TGTTTGGGGGCGGTGGTTTCAACTGTCCATTTTAAA...CCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp TCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACGCTCTTCTAGTAACATaGGAAGCCTGGATAATTAAA +
Preference number: 4 (lower is better)
Translates to: SLDTDCVSPWSWTSQPPDALLVT*EAWIIK
Trigger: TTTAATTATCCAGGCTTCTCATGTTACTAGAAGAGC...GTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp CAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTTTCTCCCTTTCAAGTaGGGACACAAAGAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: QNLTGHRLCQPLVLDFPAFLPFK*GHKEKV
Trigger: TACCTTCTCTTTGTGTCCTCACTTGAAAGGGAGAAA...GGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp CTTCCCACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGGATTTGATTAGGTCCTaGGGGCAGAGCCTTTATGAA +
Preference number: 4 (lower is better)
Translates to: LPTVCGCELRGSSIARVEDLIRS*GQSLYE
Trigger: TTCATAAAGGCTCTGCCCTCAGGACCTAATCAAATC...CTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGTGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp CTTCCCACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGTCTGATATTATAAGGTaGAACTCCGGTCTTCCCACG +
Preference number: 4 (lower is better)
Translates to: LPTVCGCELRGSSIARVESDIIR*NSGLPT
Trigger: CGTGGGAAGACCGGAGTTTCACCTTATAATATCAGA...CTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGTGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTCAGCTGAGAAGAAGATaGAGACGAAGGAGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVQLRRR*RRRSKG
Trigger: TCCCTTACTCCTTCGTCTGCATCTTCTTCTCAGCTG...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR GCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTTCCTGGAGTCCGCCGTaGCTAGCACCCCAAACAATC +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTSWSPP*LAPQTI
Trigger: GATTGTTTGGGGTGCTAGGCACGGCGGACTCCAGGA...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR GCA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATTATGGCCAGTCTGTCTaGTCGTGTACTGGGTCGGTC +
Preference number: 4 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHYGQSV*SCTGSV
Trigger: GACCGACCCAGTACACGAGCAGACAGACTGGCCATA...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
ENST00000637906.1
CDS-3UTR GCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGCTGGATACGGCTCTCTaGCGCCTGCTCGGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMLDTAL*RLLGLG
Trigger: ACCCAACCCGAGCAGGCGGCAGAGAGCCGTATCCAG...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
CDS-3UTR GCA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTAACCACTGCTCCAGTTaGACCAGGCGGCAAACTCTT +
Preference number: 4 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTNHCSS*TRRQTL
Trigger: AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTT...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTCGGCTGTGCTGGGACTaGCTCCAACATAGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLRLCWD*LQHRKS
Trigger: ACTTTTTCTATGTTGGAGGCAGTCCCAGCACAGCCG...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCTCTCTCACAGGACCTaGCAAGATAGCCTGTTCCGG +
Preference number: 4 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHLSHRT*QDSLFR
Trigger: CCGGAACAGGCTATCTTGGCAGGTCCTGTGAGAGAG...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTCTCTCTCACAGGACCTaGCAAGATAGCCTGTTCCGG +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCLSHRT*QDSLFR
Trigger: CCGGAACAGGCTATCTTGGCAGGTCCTGTGAGAGAG...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTCTCTCACAGGACCTaGCAAGATAGCCTGTTCCGG +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSLSHRT*QDSLFR
Trigger: CCGGAACAGGCTATCTTGGCAGGTCCTGTGAGAGAG...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTATAGCTCAAAACCGTTaGCTCTCTCTCACAGGACCT +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVIAQNR*LSLTGP
Trigger: AGGTCCTGTGAGAGAGAGGCAACGGTTTTGAGCTAT...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCATAGCTCAAAACCGTTaGCTCTCTCTCACAGGACCT +
Preference number: 4 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCIAQNR*LSLTGP
Trigger: AGGTCCTGTGAGAGAGAGGCAACGGTTTTGAGCTAT...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCATCAGAATGCCATATaGACGCTGGGATCGGAACCG +
Preference number: 4 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTHQNAI*TLGSEP
Trigger: CGGTTCCGATCCCAGCGTGCATATGGCATTCTGATG...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTGGTTGCCATCAGAATaGCATATGCACGCTGGGATC +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGWLPSE*HMHAGI
Trigger: GATCCCAGCGTGCATATGGCATTCTGATGGCAACCA...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAAGGTGACAGGATCTaGTATGATGTTCCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVEGDRI*YDVPEA
Trigger: GGCTTCAGGAACATCATAGCAGATCCTGTCACCTTC...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCCCTCTTGGCAGGTTGTaGTGGGCCCTTCACATCCTC +
Preference number: 4 (lower is better)
Translates to: SMKQITPFVINTLAQPSSPLGRL*WALHIL
Trigger: GAGGATGTGAAGGGCCCAGCACAACCTGCCAAGAGG...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAGGGCCAAGCTAAGATaGCAGCACATCAATTGGTTG +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLRAKLR*QHINWL
Trigger: CAACCAATTGATGTGCTGGCATCTTAGCTTGGCCCT...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR GCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCGGGCTTCAGCACCGCTaGAGCCAAAGCCTAATTCCT +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFGLQHR*SQSLIP
Trigger: AGGAATTAGGCTTTGGCTGCAGCGGTGCTGAAGCCC...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR GCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACGGAGAAAGGGATGCTTaGCTCTTTAGGGCACCATTT +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHGERDA*LFRAPF
Trigger: AAATGGTGCCCTAAAGAGGCAAGCATCCCTTTCTCC...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGAAACTCCAGCCCGCTaGCCAGCTCCGCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKETPAR*PAPPSS
Trigger: GCTGCTGGGCGGAGCTGGGCAGCGGGCTGGAGTTTC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACCCAGTTTATGGTGAAACTCCAGCCCGCTaGCCAGCTCCGCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SRRLRNKFLLLTSYPVYGETPAR*PAPPSS
Trigger: GCTGCTGGGCGGAGCTGGGCAGCGGGCTGGAGTTTC...ACCATAAACTGGGTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAATGGAGAAGCTGAGCTaGAGGCGGCCGCCGCGCGTC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKMEKLS*RRPPRV
Trigger: GACGCGCGGCGGCCGCCTGCAGCTCAGCTTCTCCAT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp CTTGAGAGGAGGATGAAGAAGGTTATCAAAAGGCATGTTCTTTTTACATGTGTTATGGAGAAGCTGAGCTaGAGGCGGCCGCCGCGCGTC +
Preference number: 4 (lower is better)
Translates to: LERRMKKVIKRHVLFTCVMEKLS*RRPPRV
Trigger: GACGCGCGGCGGCCGCCTGCAGCTCAGCTTCTCCAT...AACACATGTAAAAAGAACATGCCTTTTGATAACCTTCTTCATCCTCCTCTCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR GCA 90 bp TTAGATATTACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGTCTTAACGGAACTGGCGGCGGATaGGCACGCTGTGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: LDITHQLVQVEELYPGLNGTGGG*ARCARR
Trigger: GCGCCTGGCACAGCGTGCGCATCCGCCGCCAGTTCC...GTTAAGACCTGGATACAACTCTTCCACCTGAACTAATTGATGAGTAATATCTAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp CTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTGGAACTGGCGGCGGATaGGCACGCTGTGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: LSPKPNKFQSYTKLQYTTGTGGG*ARCARR
Trigger: GCGCCTGGCACAGCGTGCGCATCCGCCGCCAGTTCC...AGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR GCA 90 bp ATTTGCAGCCATATAATTTGCAAGCATTTGCCCATCCTTTGCAGTGATGGTTTGTCCACGGGCAGGACCTaGGAGGAGTTGACCCTCACG +
Preference number: 4 (lower is better)
Translates to: ICSHIICKHLPILCSDGLSTGRT*EELTLT
Trigger: CGTGAGGGTCAACTCCTCGCAGGTCCTGCCCGTGGA...CAAACCATCACTGCAAAGGATGGGCAAATGCTTGCAAATTATATGGCTGCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496792.3
CDS-3UTR GCA 90 bp TTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACACAGCTTGGCTGCAGTCCTTaGCGCGGAAGCCGGTTCGCG +
Preference number: 4 (lower is better)
Translates to: LVTGSCALHRQIRYIATQLGCSP*RGSRFA
Trigger: CGCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAG...CTGTGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTTGTTGTCTTCTTGGCTaGAGTCCTTGCCGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSCCLLG*SPCRGS
Trigger: GCTTCCGCGGCAAGGACTGCAGCCAAGAAGACAACA...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTTCGCCCATCATCAGGTaGGCCAGACCTTCCACATTG +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSSPIIR*ARPSTL
Trigger: CAATGTGGAAGGTCTGGCGCACCTGATGATGGGCGA...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCATCGCCCATCATCAGGTaGGCCAGACCTTCCACATTG +
Preference number: 4 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSSPIIR*ARPSTL
Trigger: CAATGTGGAAGGTCTGGCGCACCTGATGATGGGCGA...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTATTTTATTTCTTGGCTaGAGTCCTTGCCGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVILFLG*SPCRGS
Trigger: GCTTCCGCGGCAAGGACTGCAGCCAAGAAATAAAAT...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404971.5
CDS-3UTR GCA 90 bp CAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCGAAAGACAAGCTTTCTaGCCTCATAGAGCTTACACT +
Preference number: 4 (lower is better)
Translates to: QNLTGHRLCQPLVLDFPAERQAF*PHRAYT
Trigger: AGTGTAAGCTCTATGAGGGCAGAAAGCTTGTCTTTC...GGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp TGTTTAATTCATTGTGATTCTGCCAGCCCACAGCAGTGGTCTCTAACATGTCTCGGTCTTCCCACGGTCTaGGGCTGTGAGTTAAGGGGA +
Preference number: 4 (lower is better)
Translates to: CLIHCDSASPQQWSLTCLGLPTV*GCELRG
Trigger: TCCCCTTAACTCACAGCCGCAGACCGTGGGAAGACC...GAGACATGTTAGAGACCACTGCTGTGGGCTGGCAGAATCACAATGAATTAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
CDS-3UTR GCA 90 bp GCACAGAAGGATCAACATCAACTCTGTAAGGACACATCACAAAGTGAGACCAGTGGTCTTCCCACGGTCTaGGGCTGTGAGTTAAGGGGA +
Preference number: 4 (lower is better)
Translates to: AQKDQHQLCKDTSQSETSGLPTV*GCELRG
Trigger: TCCCCTTAACTCACAGCCGCAGACCGTGGGAAGACC...ACTGGTCTCACTTTGTGATGTGTCCTTACAGAGTTGATGTTGATCCTTCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR GCA 90 bp TCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACACTATTCTATATGTTTaGCACAGCTGCATACCACTT +
Preference number: 4 (lower is better)
Translates to: SLDTDCVSPWSWTSQPPDTILYV*HSCIPL
Trigger: AAGTGGTATGCAGCTGTGGCAAACATATAGAATAGT...GTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACACCGGAGCATCCTCTaGTACATGGCGGGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKHRSIL*YMAGRP
Trigger: CGGGCGCCCCGCCATGTACCAGAGGATGCTCCGGTG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000628364.2
CDS-3UTR CCA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTGCCATGGAAATGGTaGATGTGGTGCGCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTLPWKW*MWCAPK
Trigger: TTTGGGAGCGCACCACATCCACCATTTCCATGGCAG...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR CCA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCCTGATTGCATGGCAGTaGCTGTTGACTCAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCLIAWQ*LLTQLS
Trigger: TGACAACTGAGTCAACAGCCACTGCCATGCAATCAG...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCACATCTCTGATTGCATaGCAGTGGCTGTTGACTCAG +
Preference number: 4 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCTSLIA*QWLLTQ
Trigger: CTGAGTCAACAGCCACTGCCATGCAATCAGAGATGT...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCACGACTCTCGTCCACATaGTATGAGCCTTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSRLSST*YEPSSR
Trigger: CCGGGATGAAGGCTCATACCATGTGGACGAGAGTCG...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCCGACTCTCGTCCACATaGTATGAGCCTTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFRLSST*YEPSSR
Trigger: CCGGGATGAAGGCTCATACCATGTGGACGAGAGTCG...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp GTGACCCTGGAAGGTCGGCTGTGCTGGGACTGCCTCCAACATAGAAAAAGTCATCATCAGACCCCAGCATaGTATAATCTTCTTGCGTGT +
Preference number: 4 (lower is better)
Translates to: VTLEGRLCWDCLQHRKSHHQTPA*YNLLAC
Trigger: ACACGCAAGAAGATTATACCATGCTGGGGTCTGATG...ATGACTTTTTCTATGTTGGAGGCAGTCCCAGCACAGCCGACCTTCCAGGGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626249.2
CDS-3UTR CCA 90 bp AGGGAAATAAGCATTTCAGAGCATTTCGGGGGCACAAAGAGACCAGGAAATGCAGAAGGTCGGCTGTGCTaGGACTGCCTCCAACATAGA +
Preference number: 4 (lower is better)
Translates to: REISISEHFGGTKRPGNAEGRLC*DCLQHR
Trigger: TCTATGTTGGAGGCAGTCCCAGCACAGCCGACCTTC...TGCATTTCCTGGTCTCTTTGTGCCCCCGAAATGCTCTGAAATGCTTATTTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626249.2
CDS-3UTR CCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTCAGTCCACACCTCGGTaGGGAAGACAAGGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTQSTPR*GRQGQL
Trigger: AAGCTGGCCTTGTCTTCCCCACCGAGGTGTGGACTG...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTGAACATGAGTCCTCTTaGCAGGTTGTGCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCEHESS*QVVLGP
Trigger: AGGGCCCAGCACAACCTGCCAAGAGGACTCATGTTC...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCGAACATGAGTCCTCTTaGCAGGTTGTGCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFEHESS*QVVLGP
Trigger: AGGGCCCAGCACAACCTGCCAAGAGGACTCATGTTC...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTAGGGTCATTGCAGAGTaGTCCACTGAAGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVRVIAE*STEGSH
Trigger: ATGACTTCCTTCAGTGGACCACTCTGCAATGACCCT...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACATATCCATGTCTGTCTaGCTACCCTGCGTGCTTAGA +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHISMSV*LPCVLR
Trigger: TCTAAGCACGCAGGGTAGCCAGACAGACATGGATAT...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378262.7
ENST00000412315.5
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAAACAGCCCCCGCGCTaGAGCAGCGCCGTCCCCATG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKKQPPR*SSAVPM
Trigger: CATGGGGACGGCGCTGCTCCAGCGCGGGGGCTGTTT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 24 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACCCAGTTTATGGTAAACAGCCCCCGCGCTaGAGCAGCGCCGTCCCCATG +
Preference number: 4 (lower is better)
Translates to: SRRLRNKFLLLTSYPVYGKQPPR*SSAVPM
Trigger: CATGGGGACGGCGCTGCTCCAGCGCGGGGGCTGTTT...ACCATAAACTGGGTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGGGAAGCGCGTCCATTaGCCCTCGGCGCCCGGAAAC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKGKRVH*PSAPGN
Trigger: GTTTCCGGGCGCCGAGGGCCAATGGACGCGCTTCCC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACGGGAAGCGCGTCCATTaGCCCTCGGCGCCCGGAAAC +
Preference number: 4 (lower is better)
Translates to: DFSNWKLCTSQTNSLYSNGKRVH*PSAPGN
Trigger: GTTTCCGGGCGCCGAGGGCCAATGGACGCGCTTCCC...GTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CCA 90 bp CTGAATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCAGCAGGCGTTCCACTTaGGGAAGCGCGTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: LNSYFTLYQSHSTSILSFSRRST*GSASIG
Trigger: GCCAATGGACGCGCTTCCCCAAGTGGAACGCCTGCT...GAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CCA 90 bp GAAGAGGAACCTAATTCCTTCATAATGATCTATGAGCTGTTTCCCTCCCCCAATAGCAGGCGTTCCACTTaGGGAAGCGCGTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: EEEPNSFIMIYELFPSPNSRRST*GSASIG
Trigger: GCCAATGGACGCGCTTCCCCAAGTGGAACGCCTGCT...ATTGGGGGAGGGAAACAGCTCATAGATCATTATGAAGGAATTAGGTTCCTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CCA 90 bp GACTTCCCAGCCTCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACAGCAGGCGTTCCACTTaGGGAAGCGCGTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: DFPASRRLRNKFLLLTSYSRRST*GSASIG
Trigger: GCCAATGGACGCGCTTCCCCAAGTGGAACGCCTGCT...GTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGAGGCTGGGAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CCA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCTTCCCCCGCCGCTGTTaGGCGGCTCATCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SFQLQQPELRCRLTNFASFPRRC*AAHRPA
Trigger: AGCTGGACGATGAGCCGCCCAACAGCGGCGGGGGAA...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCCCTTTGGCTGGGGAATaGGTGGGCTCGGCCCGTGGT +
Preference number: 4 (lower is better)
Translates to: SFQLQQPELRCRLTNFASPLAGE*VGSARG
Trigger: ACCACGGGCCGAGCCCACCCATTCCCCAGCCAAAGG...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCAGGAAAAGGCGGTGGTaGAGCCTGAGAAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: SMKQITPFVINTLAQPSSRKRRW*SLRRLG
Trigger: ACCCAGCCTTCTCAGGCTCCACCACCGCCTTTTCCT...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCAGGAGAGGGAAAGAGCTaGGAAGGAAAAGGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSGEGKS*EGKGGG
Trigger: ACCACCGCCTTTTCCTTCCCAGCTCTTTCCCTCTCC...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCCCTTTACTTTTACCTTaGTCGCCCATCATCAGGTGC +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLPLLLP*SPIIRC
Trigger: GCACCTGATGATGGGCGACCAAGGTAAAAGTAAAGG...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp CTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACGTTCAGAGCCTTTATGAATaGGATTGCTGTCCTTATAAA +
Preference number: 4 (lower is better)
Translates to: LDTDCVSPWSWTSQPPDVQSLYE*DCCPYK
Trigger: TTTATAAGGACAGCAATCCCATTCATAAAGGCTCTG...AACGTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAGAGGCCACTTATACGTaGTTTGTCCACCACCTTTGC +
Preference number: 4 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKEATYT*FVHHLC
Trigger: GCAAAGGTGGTGGACAAATCACGTATAAGTGGCCTC...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCGTAGTCACCCAAGCCTaGAGAACTGTCCACTCGCAC +
Preference number: 4 (lower is better)
Translates to: SMKQITPFVINTLAQPSSVVTQA*RTVHSH
Trigger: GTGCGAGTGGACAGTTCTTCAGGCTTGGGTGACTAC...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTTGCCACCACTCCTCGTaGAACGAACTACATGGTATT +
Preference number: 4 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLCHHSS*NELHGI
Trigger: AATACCATGTAGTTCGTTTCACGAGGAGTGGTGGCA...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAACATGGCAGTGGCTGTTaGCTCAGTTGTCATAGAGGA +
Preference number: 4 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKHGSGC*LSCHRG
Trigger: TCCTCTATGACAACTGAGTCAACAGCCACTGCCATG...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAGCTGGGACACTCTGCTaGGGCCACAAGGATGTCATC +
Preference number: 4 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEAGTLC*GHKDVI
Trigger: GATGACATCCTTGTGGCCTCAGCAGAGTGTCCCAGC...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
CDS-3UTR TCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCACCGGATCACTTCTGCTaGGCCTGGATACGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAPDHFC*AWIRLS
Trigger: AGAGAGCCGTATCCAGGCTCAGCAGAAGTGATCCGG...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTACCGGATCACTTCTGCTaGGCCTGGATACGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLPDHFC*AWIRLS
Trigger: AGAGAGCCGTATCCAGGCTCAGCAGAAGTGATCCGG...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
CDS-3UTR TCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCACTGTGCTGAGTTACTaGTGTAGTTTCGACTCTCGT +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLTVLSY*CSFDSR
Trigger: ACGAGAGTCGAAACTACATCAGTAACTCAGCACAGT...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCACTGTGCTGAGTTACTaGTGTAGTTTCGACTCTCGT +
Preference number: 4 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCTVLSY*CSFDSR
Trigger: ACGAGAGTCGAAACTACATCAGTAACTCAGCACAGT...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCTACTCCTTTGCTTTATaGATGCGTGCGGTCATCACT +
Preference number: 4 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCYSFAL*MRAVIT
Trigger: AGTGATGACCGCACGCATTCATAAAGCAAAGGAGTA...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTCTGGCAATTGGACTaGCTTCTCAGGAAAGCGCTA +
Preference number: 4 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTLWQLD*LLRKAL
Trigger: TAGCGCTTTCCTGAGAAGTCAGTCCAATTGCCAGAG...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCGCCGATTTCCCAGTGTaGAGCATCAGTCCATTCCTC +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFADFPV*SISPFL
Trigger: GAGGAATGGACTGATGCTTCACACTGGGAAATCGGC...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTGACAGAAATGGTACCTaGCCGTCCGTCTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCDRNGT*PSVSLE
Trigger: TTCCAGAGAGACGGACGGTCAGGTACCATTTCTGTC...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTTTTGCTGTTTCCTTTaGGCAGGAAGGCTTCACTCC +
Preference number: 4 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVFCCFL*AGRLHS
Trigger: GGAGTGAAGCCTTCCTGCTCAAAGGAAACAGCAAAA...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTTTTTGCTGTTTCCTTTaGGCAGGAAGGCTTCACTCC +
Preference number: 4 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLFCCFL*AGRLHS
Trigger: GGAGTGAAGCCTTCCTGCTCAAAGGAAACAGCAAAA...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAGTTGCTGGTGTCCCTTaGTATCATCACGTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKVAGVP*YHHVVP
Trigger: TGGCACAACGTGATGATATCAAGGGACACCAGCAAC...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTGTTGCTGGTGTCCCTTaGTATCATCACGTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGVAGVP*YHHVVP
Trigger: TGGCACAACGTGATGATATCAAGGGACACCAGCAAC...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTGATGCCAGGCAGCCTTaGAAGCCTTCTTTGGCATGT +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSDARQP*KPSLAC
Trigger: ACATGCCAAAGAAGGCTTTCAAGGCTGCCTGGCATC...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCGATGCCAGGCAGCCTTaGAAGCCTTCTTTGGCATGT +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFDARQP*KPSLAC
Trigger: ACATGCCAAAGAAGGCTTTCAAGGCTGCCTGGCATC...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTAAAGAGCATCGGAGATaGGGTCCGGAAGCCGTCCAT +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTKEHRR*GPEAVH
Trigger: ATGGACGGCTTCCGGACCTCATCTCCGATGCTCTTT...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCACCAACTGGAAAACGTTaGCCCCAGTGGTACAGGGTA +
Preference number: 4 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSPTGKR*PQWYRV
Trigger: TACCCTGTACCACTGGGGTCAACGTTTTCCAGTTGG...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAGAAGATGGAGAAGCTaGGCTGCAGGCGGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKRRWRS*AAGGRR
Trigger: GCGGCGGCCGCCTGCAGCTCAGCTTCTCCATCTTCT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp CCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATGTTTTCCTCCACCTGGTCGATaGAGAGCGTGGTGTTGCGGA +
Preference number: 4 (lower is better)
Translates to: PVSQHFHSVIHSNLPKCFPPPGR*RAWCCG
Trigger: TCCGCAACACCACGCTCTTCATCGACCAGGTGGAGG...AAAACATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR TCA 90 bp GTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATGTTTTCATCCCTGCGCTTGGACTTaGCCTCCACCCACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: VSQHFHSVIHSNLPKCFHPCAWT*PPPTWP
Trigger: AGGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGG...ATGAAAACATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR TCA 90 bp AATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCCCTGCGCTTGGACTTaGCCTCCACCCACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: NSYFTLYQSHSTSILSFIPCAWT*PPPTWP
Trigger: AGGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGG...AATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR TCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGCGACGAAAAGGCCGCTaGACACCGTCATGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMRRKGR*TPSCPC
Trigger: GCAGGGACATGACGGTGTTCAGCGGCCTTTTCGTCG...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TTCAGAATAAACCAAGTACATCACTGCTTACCAACAGCACCTATGGCTAACAGTCGACGAAAAGGCCGCTaGACACCGTCATGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: FRINQVHHCLPTAPMANSRRKGR*TPSCPC
Trigger: GCAGGGACATGACGGTGTTCAGCGGCCTTTTCGTCG...ACTGTTAGCCATAGGTGCTGTTGGTAAGCAGTGATGTACTTGGTTTATTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR TCA 90 bp TTAATTTGCAGCCATATAATTTGCAAGCATTTGCCCATCCTTTGCAGTGATGGTCACGAATCCACCCCTTaGAGGGCTCCCGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: LICSHIICKHLPILCSDGHESTP*RAPAPS
Trigger: TGAGGGAGCGGGAGCCCTTCAAGGGGTGGATTCGTG...ACCATCACTGCAAAGGATGGGCAAATGCTTGCAAATTATATGGCTGCAAATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496792.3
CDS-3UTR TCA 90 bp ATTTGCAGCCATATAATTTGCAAGCATTTGCCCATCCTTTGCAGTGATGGTTTGGGACCTGCGAGGAGTTaGCCCTCACGTCACGAATCC +
Preference number: 4 (lower is better)
Translates to: ICSHIICKHLPILCSDGLGPARS*PSRHES
Trigger: GGATTCGTGACGTGAGGGTCAACTCCTCGCAGGTCC...CAAACCATCACTGCAAAGGATGGGCAAATGCTTGCAAATTATATGGCTGCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496792.3
CDS-3UTR TCA 90 bp CCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATGTTTTGGACCTGCGAGGAGTTaGCCCTCACGTCACGAATCC +
Preference number: 4 (lower is better)
Translates to: PVSQHFHSVIHSNLPKCFGPARS*PSRHES
Trigger: GGATTCGTGACGTGAGGGTCAACTCCTCGCAGGTCC...AAAACATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR TCA 90 bp AAATGTCCATTTGACTCTTTAAAATGGACAGTTGAAACCACCGCCCCCAAACAAGGACCTGCGAGGAGTTaGCCCTCACGTCACGAATCC +
Preference number: 4 (lower is better)
Translates to: KCPFDSLKWTVETTAPKQGPARS*PSRHES
Trigger: GGATTCGTGACGTGAGGGTCAACTCCTCGCAGGTCC...TTGTTTGGGGGCGGTGGTTTCAACTGTCCATTTTAAAGAGTCAAATGGACATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCAGCACACACCTCCGTTaGGGCACACCCCGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: CNNIISVHENFPMIASMPSTHLR*GTPRPR
Trigger: GCGAGGGCGGGGTGTGCCTCAACGGAGGTGTGTGCT...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AGATCTACTCTTCACAAAGAGAATAAGGCTTATGCACTTTCAGAATGTGTAACTAGCACACACCTCCGTTaGGGCACACCCCGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: RSTLHKENKAYALSECVTSTHLR*GTPRPR
Trigger: GCGAGGGCGGGGTGTGCCTCAACGGAGGTGTGTGCT...AGTTACACATTCTGAAAGTGCATAAGCCTTATTCTCTTTGTGAAGAGTAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp AATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTGAAGGCTGGGTTACGTaGCGCCGGGTGCTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: NSYFTLYQSHSTSILSFIEGWVT*RRVLSF
Trigger: GAAGGACAGCACCCGGCGTCACGTAACCCAGCCTTC...AATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS-3UTR TCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGGAGCAAGATCTCAATaGAGCAAATCACCCCATTTG +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVGARSQ*SKSPHL
Trigger: CAAATGGGGTGATTTGCTTCATTGAGATCTTGCTCC...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCGGAGCAAGATCTCAATaGAGCAAATCACCCCATTTG +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLGARSQ*SKSPHL
Trigger: CAAATGGGGTGATTTGCTTCATTGAGATCTTGCTCC...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTAAGGTGCTGTATGTCTaGAATCCAGGCCACTTCTTG +
Preference number: 4 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVKVLYV*NPGHFL
Trigger: CAAGAAGTGGCCTGGATTTCAGACATACAGCACCTT...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TCTATGAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTGCAGTTTCCAAACCCTaGGTTGTTATGGAGCACAGA +
Preference number: 4 (lower is better)
Translates to: SMNQEAKSHWTPTVSALGAVSKP*VVMEHR
Trigger: TCTGTGCTCCATAACAACTCAGGGTTTGGAAACTGC...ACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTCATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
CDS-3UTR TCA 90 bp CTTCCCACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGTTTCTCCCTTTCAAGTaGGGACACAAAGAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: LPTVCGCELRGSSIARVEFLPFK*GHKEKV
Trigger: TACCTTCTCTTTGTGTCCTCACTTGAAAGGGAGAAA...CTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGTGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACGCGGAGCGGGTGGCTaGTCCCAGATTTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKRGAGG*SQISRA
Trigger: AGCCCTGGAAATCTGGGAGCAGCCACCCGCTCCGCG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000611589.4
ENST00000628364.2
CDS-3UTR GCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTTATGGCCAGTCTGTCTaGTCGTGTACTGGGTCGGTC +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTYGQSV*SCTGSV
Trigger: GACCGACCCAGTACACGAGCAGACAGACTGGCCATA...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCTGGAAGGGCTGGCCCTaGTCTTTCCCGCCAATTATT +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFWKGWP*SFPPII
Trigger: AATAATTGGCGGGAAAGAGCAGGGCCAGCCCTTCCA...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACCCTTTGCTTTATGAATaGGTGCGGTCATCACTGTCT +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHPLLYE*VRSSLS
Trigger: AGACAGTGATGACCGCACGCATTCATAAAGCAAAGG...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGCTGTAGTACTCCTTTaGTTTATGAATGCGTGCGGT +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVAVVLL*FMNACG
Trigger: ACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCGCTGTAGTACTCCTTTaGTTTATGAATGCGTGCGGT +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLAVVLL*FMNACG
Trigger: ACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp GGCTTTCCTCTTCTGGCTGTGCTAGTAGCCAGGGTCGTGGTAGTCTCCATAATTGCTGTAGTACTCCTTTaGTTTATGAATGCGTGCGGT +
Preference number: 4 (lower is better)
Translates to: GFPLLAVLVARVVVVSIIAVVLL*FMNACG
Trigger: ACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC...AATTATGGAGACTACCACGACCCTGGCTACTAGCACAGCCAGAAGAGGAAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR GCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCAAACCACTGCTCCAGTTaGACCAGGCGGCAAACTCTT +
Preference number: 4 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSNHCSS*TRRQTL
Trigger: AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTT...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAGCAAGTTCCAACCACTaGTCCAGTTGCACCAGGCGG +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAASSNH*SSCTRR
Trigger: CCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGC...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTACCCATCCCTGCACATaGCATTGTTTTTGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGTHPCT*HCFCKG
Trigger: ACCCTTGCAAAAACAATGGCATGTGCAGGGATGGGT...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTACCCATCCCTGCACATaGCATTGTTTTTGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLTHPCT*HCFCKG
Trigger: ACCCTTGCAAAAACAATGGCATGTGCAGGGATGGGT...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCACATCAGAATGCCATATaGACGCTGGGATCGGAACCG +
Preference number: 4 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSHQNAI*TLGSEP
Trigger: CGGTTCCGATCCCAGCGTGCATATGGCATTCTGATG...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTACTACACGCACTGTGTaGCACTCGTTATCATTGAGG +
Preference number: 4 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLTTRTV*HSLSLR
Trigger: CCTCAATGATAACGAGTGGCACACAGTGCGTGTAGT...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTTACAGTGTGGAGGTTaGTGGTGTCCCTTGATATCA +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHLQCGG*WCPLIS
Trigger: TGATATCAAGGGACACCAGCAACCTCCACACTGTAA...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTTTACAGTGTGGAGGTTaGTGGTGTCCCTTGATATCA +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVLQCGG*WCPLIS
Trigger: TGATATCAAGGGACACCAGCAACCTCCACACTGTAA...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTCTCGATCTGTCCGTTaGAGAAAAGAGCATCGGAGA +
Preference number: 4 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVSRSVR*RKEHRR
Trigger: TCTCCGATGCTCTTTTCTGCAACGGACAGATCGAGA...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACAAAAGCATTCTGCCTCTTGGCAGGTTGTaGTGGGCCCTTCACATCCTC +
Preference number: 4 (lower is better)
Translates to: KGHLCSFKHSSCLHKSILPLGRL*WALHIL
Trigger: GAGGATGTGAAGGGCCCAGCACAACCTGCCAAGAGG...CAGAATGCTTTTGTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR GCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTTTGGATGCTTGTGAATaGCTCAAGTCTGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVLDACE*LKSVSF
Trigger: GAAGGAGACAGACTTGAGGCATTCACAAGCATCCAA...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR GCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTGGAGTGAGAGGGATGTaGCCTCCTTTATCTAGTTCT +
Preference number: 4 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVGVRGM*PPLSSS
Trigger: AGAACTAGATAAAGGAGGGCACATCCCTCTCACTCC...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTGGAGTGAGAGGGATGTaGCCTCCTTTATCTAGTTCT +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGGVRGM*PPLSSS
Trigger: AGAACTAGATAAAGGAGGGCACATCCCTCTCACTCC...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCGAAACTCCAGCCCGCTaGCCAGCTCCGCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CNNIISVHENFPMIASMPETPAR*PAPPSS
Trigger: GCTGCTGGGCGGAGCTGGGCAGCGGGCTGGAGTTTC...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp ATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACAGAAACTCCAGCCCGCTaGCCAGCTCCGCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ILVTGSCALHRQIRYIATETPAR*PAPPSS
Trigger: GCTGCTGGGCGGAGCTGGGCAGCGGGCTGGAGTTTC...TGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCAATGGAGAAGCTGAGCTaGAGGCGGCCGCCGCGCGTC +
Preference number: 4 (lower is better)
Translates to: CRLTNFASITCPHNGSYSMEKLS*RRPPRV
Trigger: GACGCGCGGCGGCCGCCTGCAGCTCAGCTTCTCCAT...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACGGATGCGCACGCTGTaGCAGGCGCCGTCGTTAACC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKRMRTL*QAPSLT
Trigger: GGTTAACGACGGCGCCTGGCACAGCGTGCGCATCCG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACACAGTCCACGGGCAGGACCTaGGAGGAGTTGACCCTCACG +
Preference number: 4 (lower is better)
Translates to: LVTGSCALHRQIRYIATQSTGRT*EELTLT
Trigger: CGTGAGGGTCAACTCCTCGCAGGTCCTGCCCGTGGA...CTGTGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACTTGGCTGCAGTCCTTaGCGCGGAAGCCGGTTCGCG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKLGCSP*RGSRFA
Trigger: CGCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTTGTTGTCTTCTTGGCTaGAGTCCTTGCCGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTCCLLG*SPCRGS
Trigger: GCTTCCGCGGCAAGGACTGCAGCCAAGAAGACAACA...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp ACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAGTCTATCTCCAGGAGTaGGGGAGGGGAGAACAGGCA +
Preference number: 4 (lower is better)
Translates to: TLYQSHSTSILSFILTCPVYLQE*GRGEQA
Trigger: TGCCTGTTCTCCCCTCCCGCACTCCTGGAGATAGAC...TGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS-3UTR GCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGCATATCTGATGGATTaGTGTGGATTCGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVAYLMD*CGFVCV
Trigger: CACACACACGAATCCACAGCAATCCATCAGATATGC...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp ACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCATTTGCATCGTCCCCTTaGAGGGGGAGCCTGATCCTG +
Preference number: 4 (lower is better)
Translates to: TLYQSHSTSILSFILTCPFASSP*RGSLIL
Trigger: CAGGATCAGGCTCCCCCTGCAAGGGGACGATGCAAA...TGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS-3UTR GCA 90 bp CACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCTCCAGGTCTGGATGCTaGGGAGCGAGGTGCTTTTAC +
Preference number: 4 (lower is better)
Translates to: HFVPVSQHFHSVIHSNLPSRSGC*GARCFY
Trigger: GTAAAAGCACCTCGCTCCGCAGCATCCAGACCTGGA...GGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS-3UTR GCA 90 bp CCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATGTTTTCCCTCCAGGTCTGGATaGTGCGGAGCGAGGTGCTTT +
Preference number: 4 (lower is better)
Translates to: PVSQHFHSVIHSNLPKCFPSRSG*CGARCF
Trigger: AAAGCACCTCGCTCCGCAGCATCCAGACCTGGAGGG...AAAACATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS-3UTR GCA 90 bp GAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGGAAAGACAAGCTTTCTaGCCTCATAGAGCTTACACT +
Preference number: 4 (lower is better)
Translates to: EPGSKISLDTDCVSPWSWERQAF*PHRAYT
Trigger: AGTGTAAGCTCTATGAGGGCAGAAAGCTTGTCTTTC...CCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp CTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACGTTTTCTTAGTTTGTATATaGACCAAACACAGGCATTTC +
Preference number: 4 (lower is better)
Translates to: LDTDCVSPWSWTSQPPDVFLVCI*TKHRHF
Trigger: GAAATGCCTGTGTTTGGTGCATATACAAACTAAGAA...AACGTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp CTTCCCACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGAAGGGGATCCAGTATTaGAAGAGTAGAGGTAACACA +
Preference number: 4 (lower is better)
Translates to: LPTVCGCELRGSSIARVEKGIQY*KSRGNT
Trigger: TGTGTTACCTCTACTCTTGCAATACTGGATCCCCTT...CTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGTGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp TGCAGCCATATAATTTGCAAGCATTTGCCCATCCTTTGCAGTGATGGTTTGAAATCGCCCATCATCAGGTaGGCCAGACCTTGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: CSHIICKHLPILCSDGLKSPIIR*ARPWLQ
Trigger: CTGCAGCCAAGGTCTGGCGCACCTGATGATGGGCGA...TTTCAAACCATCACTGCAAAGGATGGGCAAATGCTTGCAAATTATATGGCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496792.3
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGCGGGAGGCAAAGTTTaGGGCGCGGGGAGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKAGGKV*GAGRGE
Trigger: CTCTCCTCTCCCCGCGCCCCAAACTTTGCCTCCCGC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000611589.4
ENST00000628364.2
CDS-3UTR CCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCCTGCCATGGAAATGGTaGATGTGGTGCGCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFLPWKW*MWCAPK
Trigger: TTTGGGAGCGCACCACATCCACCATTTCCATGGCAG...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR CCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAACTGCTGCCATGGAAATaGTGGATGTGGTGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: AVVLLCFMNACGHHCLLELLPWK*WMWCAP
Trigger: GGGAGCGCACCACATCCACCATTTCCATGGCAGCAG...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000637906.1
CDS-3UTR CCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTATGTCCACCTGCAACGTaGCATTGCCACCACTCCTCG +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLCPPAT*HCHHSS
Trigger: CGAGGAGTGGTGGCAATGCCACGTTGCAGGTGGACA...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
ENST00000637906.1
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATGGCCCTGGAAGGGCTaGCCCTGCTCTTTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKWPWKG*PCSFPP
Trigger: TGGCGGGAAAGAGCAGGGCCAGCCCTTCCAGGGCCA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000637906.1
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATACAGCCCAGAGAGCTaGCCCTGGAAGGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKYSPES*PWKGWP
Trigger: GGGCCAGCCCTTCCAGGGCCAGCTCTCTGGGCTGTA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000637906.1
CDS-3UTR CCA 90 bp TTTTTCCCTGGTGCTGAAGCCTCAGATGCATTGAGAGCCAGTGTACTTTGTCTTCCACTATGGCGATGTTaGCATCGTTTTCGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: FFPGAEASDALRASVLCLPLWRC*HRFRLP
Trigger: TGGCAGCCGAAAACGATGCCAACATCGCCATAGTGG...AAGACAAAGTACACTGGCTCTCAATGCATCTGAGGCTTCAGCACCAGGGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR CCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTCTGATTGCATGGCAGTaGCTGTTGACTCAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGLIAWQ*LLTQLS
Trigger: TGACAACTGAGTCAACAGCCACTGCCATGCAATCAG...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTCTGATTGCATGGCAGTaGCTGTTGACTCAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVLIAWQ*LLTQLS
Trigger: TGACAACTGAGTCAACAGCCACTGCCATGCAATCAG...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTACATCTCTGATTGCATaGCAGTGGCTGTTGACTCAG +
Preference number: 4 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLTSLIA*QWLLTQ
Trigger: CTGAGTCAACAGCCACTGCCATGCAATCAGAGATGT...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCCATCAGACCCCAGCATaGTATAATCTTCTTGCGTGT +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLHQTPA*YNLLAC
Trigger: ACACGCAAGAAGATTATACCATGCTGGGGTCTGATG...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCATCTGTGGGTGCTTaGCATCTTTCTGATGTCTTG +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHSSVGA*HLSDVL
Trigger: CAAGACATCAGAAAGATGCCAAGCACCCACAGATGA...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACCACCTTTATCATCTGTaGGTGCTTGGCATCTTTCTG +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHHLYHL*VLGIFL
Trigger: CAGAAAGATGCCAAGCACCCACAGATGATAAAGGTG...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAATGCCATATGCACGCTaGGATCGGAACCGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKMPYAR*DRNRKE
Trigger: TTCCTTACGGTTCCGATCCCAGCGTGCATATGGCAT...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTCAGTGTGGAGGTTGCTaGTGTCCCTTGATATCATCA +
Preference number: 4 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLQCGGC*CPLISS
Trigger: TGATGATATCAAGGGACACCAGCAACCTCCACACTG...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTTCAATCTTTACAGTGTaGAGGTTGCTGGTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVSIFTV*RLLVSL
Trigger: AAGGGACACCAGCAACCTCCACACTGTAAAGATTGA...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTAGCACACACCTTGATTaGAACATGAGTCCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGSTHLD*NMSPLG
Trigger: GCCAAGAGGACTCATGTTCCAATCAAGGTGTGTGCT...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTAGGGTCATTGCAGAGTaGTCCACTGAAGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVRVIAE*STEGSH
Trigger: ATGACTTCCTTCAGTGGACCACTCTGCAATGACCCT...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTAGGGTCATTGCAGAGTaGTCCACTGAAGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGRVIAE*STEGSH
Trigger: ATGACTTCCTTCAGTGGACCACTCTGCAATGACCCT...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TGTTTAATTCATTGTGATTCTGCCAGCCCACAGCAGTGGTCTCTAACATGTCTCGCCAGGTTCCACCAGTaGTACCAGGCCAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: CLIHCDSASPQQWSLTCLARFHQ*YQAKRK
Trigger: CTTCCTTTTGGCCTGGTACCACTGGTGGAACCTGGC...GAGACATGTTAGAGACCACTGCTGTGGGCTGGCAGAATCACAATGAATTAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405581.3
CDS-3UTR CCA 90 bp CCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGCAAACAGCCCCCGCGCTaGAGCAGCGCCGTCCCCATG +
Preference number: 4 (lower is better)
Translates to: PKTQQIPILYKVTIHNYSKQPPR*SSAVPM
Trigger: CATGGGGACGGCGCTGCTCCAGCGCGGGGGCTGTTT...GCTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CCA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCGGGAAGCGCGTCCATTaGCCCTCGGCGCCCGGAAAC +
Preference number: 4 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSIGKRVH*PSAPGN
Trigger: GTTTCCGGGCGCCGAGGGCCAATGGACGCGCTTCCC...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp CCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGGGGAAGCGCGTCCATTaGCCCTCGGCGCCCGGAAAC +
Preference number: 4 (lower is better)
Translates to: PQNPTNSNLIQSYNTQLQGKRVH*PSAPGN
Trigger: GTTTCCGGGCGCCGAGGGCCAATGGACGCGCTTCCC...CTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CCA 90 bp TTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCAGCAGGCGTTCCACTTaGGGAAGCGCGTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: FTLYQSHSTSILSFILTCSRRST*GSASIG
Trigger: GCCAATGGACGCGCTTCCCCAAGTGGAACGCCTGCT...GCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CCA 90 bp CCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATGTTTTAGCAGGCGTTCCACTTaGGGAAGCGCGTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: PVSQHFHSVIHSNLPKCFSRRST*GSASIG
Trigger: GCCAATGGACGCGCTTCCCCAAGTGGAACGCCTGCT...AAAACATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGGTGTTGCGGAACTaGCGGCGGATGCGCACGCTG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKVVLRN*RRMRTL
Trigger: CAGCGTGCGCATCCGCCGCCAGTTCCGCAACACCAC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp CATGATAAGGGATTTTGCAGTTTCCAAACCCTGAGTTGTTATGGAGCACAGAAGCACTTGGCCTCCACCTaGTCGATGAAGAGCGTGGTG +
Preference number: 4 (lower is better)
Translates to: HDKGFCSFQTLSCYGAQKHLAST*SMKSVV
Trigger: CACCACGCTCTTCATCGACCAGGTGGAGGCCAAGTG...CTTCTGTGCTCCATAACAACTCAGGGTTTGGAAACTGCAAAATCCCTTATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR CCA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAATTCCCCCGCCGCTGTTaGGCGGCTCATCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKFPRRC*AAHRPA
Trigger: AGCTGGACGATGAGCCGCCCAACAGCGGCGGGGGAA...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTCCCCCGCCGCTGTTaGGCGGCTCATCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKFPRRC*AAHRPA
Trigger: AGCTGGACGATGAGCCGCCCAACAGCGGCGGGGGAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACAGTCGCACACGGCCTaGTCGTCCACCACGGAGCAC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKQSHTA*SSTTEH
Trigger: GTGCTCCGTGGTGGACGACCAGGCCGTGTGCGACTG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCTGGCTGGGGAATGGGTaGGCTCGGCCCGTGGTCGCA +
Preference number: 4 (lower is better)
Translates to: CNNIISVHENFPMIASMPWLGNG*ARPVVA
Trigger: TGCGACCACGGGCCGAGCCCACCCATTCCCCAGCCA...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCTGATGGATTGCTGTaGATTCGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHSDGLL*IRVCVC
Trigger: ACACACACACACACGAATCCACAGCAATCCATCAGA...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTTCTGATGGATTGCTGTaGATTCGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVSDGLL*IRVCVC
Trigger: ACACACACACACACGAATCCACAGCAATCCATCAGA...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp TGCAGTTTCCAAACCCTGAGTTGTTATGGAGCACAGAAGGATCAACATCAACTCGCCAGCCCACAGCAGTaGTCTCTAACATGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: CSFQTLSCYGAQKDQHQLASPQQ*SLTCLQ
Trigger: CTGGAGACATGTTAGAGACCACTGCTGTGGGCTGGC...GAGTTGATGTTGATCCTTCTGTGCTCCATAACAACTCAGGGTTTGGAAACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAAGCGGAGCATCCTCTaGTACATGGCGGGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKKRSIL*YMAGRP
Trigger: CGGGCGCCCCGCCATGTACCAGAGGATGCTCCGCTT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000611589.4
CDS-3UTR CCA 90 bp GAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGCAGAACTGTGAACTGTaGTCCCAATTCACCAGATTA +
Preference number: 4 (lower is better)
Translates to: EPGSKISLDTDCVSPWSWQNCEL*SQFTRL
Trigger: TAATCTGGTGAATTGGGACCACAGTTCACAGTTCTG...CCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR CAA 72 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTaGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKG*QVESLKRTVFS
Trigger: AGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAACGGCGGAAAGGCAGCTaGGAAGAAGATGCAGACGAA +
Preference number: 4 (lower is better)
Translates to: AVVLLCFMNACGHHCLLERRKGS*EEDADE
Trigger: TTCGTCTGCATCTTCTTCTCAGCTGCCTTTCCGCCG...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR TCA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATGAGGCCACTTATACGTaGTTTGTCCACCACCTTTGC +
Preference number: 4 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHEATYT*FVHHLC
Trigger: GCAAAGGTGGTGGACAAATCACGTATAAGTGGCCTC...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
ENST00000637906.1
CDS-3UTR TCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAGTAGTCACCCAAGCCTaGAGAACTGTCCACTCGCAC +
Preference number: 4 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEVVTQA*RTVHSH
Trigger: GTGCGAGTGGACAGTTCTTCAGGCTTGGGTGACTAC...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
ENST00000637906.1
CDS-3UTR TCA 90 bp GTTGACTCAGTTGTCATAGAGGAAGGCACTTCACCAACCAGTCTCACATTTCCCTGCCACCACTCCTCGTaGAACGAACTACATGGTATT +
Preference number: 4 (lower is better)
Translates to: VDSVVIEEGTSPTSLTFPCHHSS*NELHGI
Trigger: AATACCATGTAGTTCGTTTCACGAGGAGTGGTGGCA...GGGAAATGTGAGACTGGTTGGTGAAGTGCCTTCCTCTATGACAACTGAGTCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR TCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCATGGCAGTGGCTGTTaGCTCAGTTGTCATAGAGGA +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSHGSGC*LSCHRG
Trigger: TCCTCTATGACAACTGAGTCAACAGCCACTGCCATG...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCATGGCAGTGGCTGTTaGCTCAGTTGTCATAGAGGA +
Preference number: 4 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHHGSGC*LSCHRG
Trigger: TCCTCTATGACAACTGAGTCAACAGCCACTGCCATG...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
ENST00000637906.1
CDS-3UTR TCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGCCGGATCACTTCTGCTaGGCCTGGATACGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMPDHFC*AWIRLS
Trigger: AGAGAGCCGTATCCAGGCTCAGCAGAAGTGATCCGG...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
CDS-3UTR TCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTCTCGTCCACATGGTATaGGCCTTCATCCCGGTTTCT +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTLVHMV*AFIPVS
Trigger: AGAAACCGGGATGAAGGCTCATACCATGTGGACGAG...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTACTGTGCTGAGTTACTaGTGTAGTTTCGACTCTCGT +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGTVLSY*CSFDSR
Trigger: ACGAGAGTCGAAACTACATCAGTAACTCAGCACAGT...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTTACTCCTTTGCTTTATaGATGCGTGCGGTCATCACT +
Preference number: 4 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLYSFAL*MRAVIT
Trigger: AGTGATGACCGCACGCATTCATAAAGCAAAGGAGTA...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp GTTGGAGCTTTTCGCACTGCTGGGTTGTTTCTCCTTTACAACAGCCCCATTGGATACTCCTTTGCTTTATaGATGCGTGCGGTCATCACT +
Preference number: 4 (lower is better)
Translates to: VGAFRTAGLFLLYNSPIGYSFAL*MRAVIT
Trigger: AGTGATGACCGCACGCATTCATAAAGCAAAGGAGTA...TCCAATGGGGCTGTTGTAAAGGAGAAACAACCCAGCAGTGCGAAAAGCTCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635519.1
ENST00000637906.1
CDS-3UTR TCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCTTTTGTGTTGTGCCTTaGTGCTGTAGTACTCCTTTG +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLFCVVP*CCSTPL
Trigger: CAAAGGAGTACTACAGCATCAAGGCACAACACAAAA...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCACTCTGGCAATTGGACTaGCTTCTCAGGAAAGCGCTA +
Preference number: 4 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSLWQLD*LLRKAL
Trigger: TAGCGCTTTCCTGAGAAGTCAGTCCAATTGCCAGAG...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCTCTGGCAATTGGACTaGCTTCTCAGGAAAGCGCTA +
Preference number: 4 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHLWQLD*LLRKAL
Trigger: TAGCGCTTTCCTGAGAAGTCAGTCCAATTGCCAGAG...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCCAGAAAGGGGCTTTTTaGATGTGTTCCTACACAAGT +
Preference number: 4 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCQKGAF*MCSYTS
Trigger: ACTTGTGTAGGAACACATTCAAAAAGCCCCTTTCTG...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp ATAATCAGCCGATTTCCCAGTGTGAAGCATCAGTCCATTCCTCTGAAGGGTTTTGCCGATTTCCCAGTGTaGAGCATCAGTCCATTCCTC +
Preference number: 4 (lower is better)
Translates to: IISRFPSVKHQSIPLKGFADFPV*SISPFL
Trigger: GAGGAATGGACTGATGCTTCACACTGGGAAATCGGC...AAAACCCTTCAGAGGAATGGACTGATGCTTCACACTGGGAAATCGGCTGATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626249.2
CDS-3UTR TCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTTTTTCAGGGCAAGATTaGCATAATCAGCCGATTTCC +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVFSGQD*HNQPIS
Trigger: GGAAATCGGCTGATTATGTCAATCTTGCCCTGAAAA...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACAAAAGCATTCTGGTTGTTACTGACTGGTaGCCCTGGAAGGTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: KGHLCSFKHSSCLHKSILVVTDW*PWKVGC
Trigger: ACAGCCGACCTTCCAGGGTCACCAGTCAGTAACAAC...CAGAATGCTTTTGTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR TCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGTTGTTACTGACTGGTaGCCCTGGAAGGTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLVVTDW*PWKVGC
Trigger: ACAGCCGACCTTCCAGGGTCACCAGTCAGTAACAAC...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGAGTTGTTACTGACTGGTaGCCCTGGAAGGTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGVVTDW*PWKVGC
Trigger: ACAGCCGACCTTCCAGGGTCACCAGTCAGTAACAAC...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTCTGGGGTTTCAAAGGTaGTTGGGTCTAAAGTTGCAA +
Preference number: 4 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVLGFQR*LGLKLQ
Trigger: TTGCAACTTTAGACCCAATCACCTTTGAAACCCCAG...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTCTGGGGTTTCAAAGGTaGTTGGGTCTAAAGTTGCAA +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGLGFQR*LGLKLQ
Trigger: TTGCAACTTTAGACCCAATCACCTTTGAAACCCCAG...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCTGCTTGGCATCTTTCTaGTGTCTTGGCTTGCCATGG +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFCLASF*CLGLPW
Trigger: CCATGGCAAGCCAAGACATCAGAAAGATGCCAAGCA...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTGAGTACGCAACGTGTTaGCAGAAATGGTACCTGACC +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSEYATC*QKWYLT
Trigger: GGTCAGGTACCATTTCTGTCAACACGTTGCGTACTC...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCGCCACTGATTGTCATTaGGAGGTTTATTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLATDCH*EVYLSF
Trigger: GAAGCTCAAATAAACCTCTCAATGACAATCAGTGGC...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAGACAGGAGAGCTCCCTaGCTCAGTGGGAGATCAAGA +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLADRRAP*LSGRSR
Trigger: TCTTGATCTCCCACTGAGTCAGGGAGCTCTCCTGTC...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378262.7
ENST00000412315.5
ENST00000635519.1
CDS-3UTR TCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGGCTCGAGCCAGAGCCTaGAGCATGCATCGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMARARA*SMHRSK
Trigger: CTTTGACCGATGCATGCTTCAGGCTCTGGCTCGAGC...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR TCA 90 bp AAATGTCCATTTGACTCTTTAAAATGGACAGTTGAAACCACCGCCCCCAAACAAGCTCGAGCCAGAGCCTaGAGCATGCATCGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: KCPFDSLKWTVETTAPKQARARA*SMHRSK
Trigger: CTTTGACCGATGCATGCTTCAGGCTCTGGCTCGAGC...TTGTTTGGGGGCGGTGGTTTCAACTGTCCATTTTAAAGAGTCAAATGGACATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR TCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTATCCTTGGATGCTTGTaGATGCCTCAAGTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGILGCL*MPQVCL
Trigger: GAGACAGACTTGAGGCATTCACAAGCATCCAAGGAT...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR TCA 90 bp GACTTCCCAGCCTCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACTGGTCCTGGACACCGTaGCGAAGAAATAAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: DFPASRRLRNKFLLLTSYWSWTP*RRNKGP
Trigger: GGGACCCTTATTTCTTCGTCACGGTGTCCAGGACCA...GTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGAGGCTGGGAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGGGCGCTGCGAGTCTTaGGCTGGAAGCTCATCTCGC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKGRCES*AGSSSR
Trigger: GCGAGATGAGCTTCCAGCTCAAGACTCGCAGCGCCC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACCCTGCGCTTGGACTTaGCCTCCACCCACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKPCAWT*PPPTWP
Trigger: AGGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCTTTAAAATGGACAGTTGAAACCACCGCCCCCAAACAAATACATTTAAGTCATCCCTGCGCTTGGACTTaGCCTCCACCCACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SLKWTVETTAPKQIHLSHPCAWT*PPPTWP
Trigger: AGGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGG...ATGACTTAAATGTATTTGTTTGGGGGCGGTGGTTTCAACTGTCCATTTTAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACACGAATCCACCCCTTaGAGGGCTCCCGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKHESTP*RAPAPS
Trigger: TGAGGGAGCGGGAGCCCTTCAAGGGGTGGATTCGTG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCAGAGAAGGGCGGAGCTaGGCTCTCCGCAGTACCATG +
Preference number: 4 (lower is better)
Translates to: SFQLQQPELRCRLTNFASREGRS*ALRSTM
Trigger: CATGGTACTGCGGAGAGCTCAGCTCCGCCCTTCTCT...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404971.5
ENST00000406316.6
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGAAGGCTGGGTTACGTaGCGCCGGGTGCTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKEGWVT*RRVLSF
Trigger: GAAGGACAGCACCCGGCGTCACGTAACCCAGCCTTC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404971.5
ENST00000406316.6
CDS-3UTR TCA 90 bp TCTGAATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCAGAGGCGTCAGGCTTaGGCGTCTATCTCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: SEFLLHFVPVSQHFHSVIQRRQA*ASISRS
Trigger: ACTCCTGGAGATAGACGCTCAAGCCTGACGCCTCTG...AATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR TCA 90 bp TTCAGAATAAACCAAGTACATCACTGCTTACCAACAGCACCTATGGCTAACAGTCAGAGGCGTCAGGCTTaGGCGTCTATCTCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: FRINQVHHCLPTAPMANSQRRQA*ASISRS
Trigger: ACTCCTGGAGATAGACGCTCAAGCCTGACGCCTCTG...ACTGTTAGCCATAGGTGCTGTTGGTAAGCAGTGATGTACTTGGTTTATTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR TCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTACCAATGCCTGAGTGCTaGCGCAGATTCCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLPMPEC*RRFLVT
Trigger: AGTCACCAGGAATCTGCGTCAGCACTCAGGCATTGG...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR TCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTATCTTCCAGCATATCTaGTGGATTGCTGTGGATTCG +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGIFQHI*WIAVDS
Trigger: CGAATCCACAGCAATCCATCAGATATGCTGGAAGAT...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTATCTTCCAGCATATCTaGTGGATTGCTGTGGATTCG +
Preference number: 4 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVIFQHI*WIAVDS
Trigger: CGAATCCACAGCAATCCATCAGATATGCTGGAAGAT...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAAGGTGCTGTATGTCTaGAATCCAGGCCACTTCTTG +
Preference number: 4 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKKVLYV*NPGHFL
Trigger: CAAGAAGTGGCCTGGATTTCAGACATACAGCACCTT...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTTTAACTGGCTTTCCCTaGGTAAGACTGAATGAGACG +
Preference number: 4 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLLTGFP*VRLNET
Trigger: CGTCTCATTCAGTCTTACTCAGGGAAAGCCAGTTAA...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTAACTGGCTTTCCCTaGGTAAGACTGAATGAGACG +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGLTGFP*VRLNET
Trigger: CGTCTCATTCAGTCTTACTCAGGGAAAGCCAGTTAA...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCCTATGCAGGGAACCCTaGTATGTTTGGTATGAAGAT +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLLCREP*YVWYED
Trigger: ATCTTCATACCAAACATATCAGGGTTCCCTGCATAG...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTTTATGCCAAGTCGTGTaGAATCCTCAATCAACTGCA +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVLCQVV*NPQSTA
Trigger: TGCAGTTGATTGAGGATTTCACACGACTTGGCATAA...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TCTATGAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTGTGTTTAATTCATTGTaGTTCTGCCAGCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: SMNQEAKSHWTPTVSALGVFNSL*FCQPTA
Trigger: TGCTGTGGGCTGGCAGAATCACAATGAATTAAACAC...ACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTCATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
CDS-3UTR TCA 90 bp ACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCACACGGTCTGCGGCTGTaGGTTAAGGGGATCCAGTAT +
Preference number: 4 (lower is better)
Translates to: TLYQSHSTSILSFILTCPHGLRL*VKGIQY
Trigger: ATACTGGATCCCCTTAACTCACAGCCGCAGACCGTG...TGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR TCA 90 bp TCTATGAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTTCTGATATTATAAGGTaGAACTCCGGTCTTCCCACG +
Preference number: 4 (lower is better)
Translates to: SMNQEAKSHWTPTVSALGSDIIR*NSGLPT
Trigger: CGTGGGAAGACCGGAGTTTCACCTTATAATATCAGA...ACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTCATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp GTGACCCTGGAAGGTCGGCTGTGCTGGGACTGCCTCCAACATAGAAAAAGTCATACTTTGATCTCTATTTaGATTCCCGGCCATTCAAAG +
Preference number: 4 (lower is better)
Translates to: VTLEGRLCWDCLQHRKSHTLISI*IPGHSK
Trigger: CTTTGAATGGCCGGGAATTCAAATAGAGATCAAAGT...ATGACTTTTTCTATGTTGGAGGCAGTCCCAGCACAGCCGACCTTCCAGGGTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626249.2
CDS-3UTR TCA 90 bp GTGACCCTGGAAGGTCGGCTGTGCTGGGACTGCCTCCAACATAGAAAAAGTCATTTCCTGATAGGTCAGTaGCTACAGAAACACTTATAC +
Preference number: 4 (lower is better)
Translates to: VTLEGRLCWDCLQHRKSHFLIGQ*LQKHLY
Trigger: GTATAAGTGTTTCTGTAGTCACTGACCTATCAGGAA...ATGACTTTTTCTATGTTGGAGGCAGTCCCAGCACAGCCGACCTTCCAGGGTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626249.2
CDS-3UTR GCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACGGCATCGTTTTCGGCTaGCATATTCAGAACTTTCAA +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHGIVFG*HIQNFQ
Trigger: TTGAAAGTTCTGAATATGGCAGCCGAAAACGATGCC...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACTGGATACGGCTCTCTaGCGCCTGCTCGGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKLDTAL*RLLGLG
Trigger: ACCCAACCCGAGCAGGCGGCAGAGAGCCGTATCCAG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000412315.5
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000630656.1
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
CDS-3UTR GCA 90 bp GCTGTGCTAGTAGCCAGGGTCGTGGTAGTCTCCATAATTGATGTGGACATCTCTCCTTTGCTTTATGAATaGGTGCGGTCATCACTGTCT +
Preference number: 4 (lower is better)
Translates to: AVLVARVVVVSIIDVDISPLLYE*VRSSLS
Trigger: AGACAGTGATGACCGCACGCATTCATAAAGCAAAGG...AGAGATGTCCACATCAATTATGGAGACTACCACGACCCTGGCTACTAGCACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR GCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTGCTGTAGTACTCCTTTaGTTTATGAATGCGTGCGGT +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGAVVLL*FMNACG
Trigger: ACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGGCAAGTTCCAACCACTaGTCCAGTTGCACCAGGCGG +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMASSNH*SSCTRR
Trigger: CCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGC...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTCGGCTGTGCTGGGACTaGCTCCAACATAGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCRLCWD*LQHRKS
Trigger: ACTTTTTCTATGTTGGAGGCAGTCCCAGCACAGCCG...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AATGACTGCAGGTCAAGGATTCCAATAAGGAAACAGAAGGTTGCAGATGTTAGACTGGAAGGTCGGCTGTaGTGGGACTGCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: NDCRSRIPIRKQKVADVRLEGRL*WDCLQH
Trigger: ATGTTGGAGGCAGTCCCAGCACAGCCGACCTTCCAG...TCTAACATCTGCAACCTTCTGTTTCCTTATTGGAATCCTTGACCTGCAGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR GCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGCTGGAAGGTCGGCTGTaGTGGGACTGCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTELEGRL*WDCLQH
Trigger: ATGTTGGAGGCAGTCCCAGCACAGCCGACCTTCCAG...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TTCAGAATAAACCAAGTACATCACTGCTTACCAACAGCACCTATGGCTAACAGTCTGGAAGGTCGGCTGTaGTGGGACTGCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: FRINQVHHCLPTAPMANSLEGRL*WDCLQH
Trigger: ATGTTGGAGGCAGTCCCAGCACAGCCGACCTTCCAG...ACTGTTAGCCATAGGTGCTGTTGGTAAGCAGTGATGTACTTGGTTTATTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR GCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTCTCTCACAGGACCTaGCAAGATAGCCTGTTCCGG +
Preference number: 4 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGLSHRT*QDSLFR
Trigger: CCGGAACAGGCTATCTTGGCAGGTCCTGTGAGAGAG...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAACTACACGCACTGTGTaGCACTCGTTATCATTGAGG +
Preference number: 4 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKTTRTV*HSLSLR
Trigger: CCTCAATGATAACGAGTGGCACACAGTGCGTGTAGT...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAACCTAGTATGATCACCTaGCATTTGACCTGTCATGGC +
Preference number: 4 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKPSMIT*HLTCHG
Trigger: GCCATGACAGGTCAAATGGCAGGTGATCATACTAGG...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTTTACAGTGTGGAGGTTaGTGGTGTCCCTTGATATCA +
Preference number: 4 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLLQCGG*WCPLIS
Trigger: TGATATCAAGGGACACCAGCAACCTCCACACTGTAA...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCATCAAGATGATAAATTaGCTGCGCATCAGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFIKMIN*LRISPA
Trigger: GGCCGGGCTGATGCGCAGGCAATTTATCATCTTGAT...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378262.7
ENST00000412315.5
CDS-3UTR GCA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCCAGAGCCTGAAGCATaGATCGGTCAAAGCGAATTT +
Preference number: 4 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTPEPEA*IGQSEF
Trigger: AAATTCGCTTTGACCGATGCATGCTTCAGGCTCTGG...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR GCA 90 bp CAACAGATGGCACAAGGTGGGGATATTCACATAAGACAGACTTGGATTGATGTTGGGCTTCAGCACCGCTaGAGCCAAAGCCTAATTCCT +
Preference number: 4 (lower is better)
Translates to: QQMAQGGDIHIRQTWIDVGLQHR*SQSLIP
Trigger: AGGAATTAGGCTTTGGCTGCAGCGGTGCTGAAGCCC...AACATCAATCCAAGTCTGTCTTATGTGAATATCCCCACCTTGTGCCATCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR GCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGGATGCTTGTGAATaGCTCAAGTCTGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGLDACE*LKSVSF
Trigger: GAAGGAGACAGACTTGAGGCATTCACAAGCATCCAA...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR GCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAGGAGTGAGAGGGATGTaGCCTCCTTTATCTAGTTCT +
Preference number: 4 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKGVRGM*PPLSSS
Trigger: AGAACTAGATAAAGGAGGGCACATCCCTCTCACTCC...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp CCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGCGGATGCGCACGCTGTaGCAGGCGCCGTCGTTAACC +
Preference number: 4 (lower is better)
Translates to: PQNPTNSNLIQSYNTQLQRMRTL*QAPSLT
Trigger: GGTTAACGACGGCGCCTGGCACAGCGTGCGCATCCG...CTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR GCA 90 bp GGTAATATTAGATATTACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGCGGATGCGCACGCTGTaGCAGGCGCCGTCGTTAACC +
Preference number: 4 (lower is better)
Translates to: GNIRYYSSISSGGRVVSRRMRTL*QAPSLT
Trigger: GGTTAACGACGGCGCCTGGCACAGCGTGCGCATCCG...CCTGGATACAACTCTTCCACCTGAACTAATTGATGAGTAATATCTAATATTACC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATCCACGGGCAGGACCTaGGAGGAGTTGACCCTCACG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKSTGRT*EELTLT
Trigger: CGTGAGGGTCAACTCCTCGCAGGTCCTGCCCGTGGA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCCTTGGCTGCAGTCCTTaGCGCGGAAGCCGGTTCGCG +
Preference number: 4 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSILGCSP*RGSRFA
Trigger: CGCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAG...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp CCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGCCTTGGCTGCAGTCCTTaGCGCGGAAGCCGGTTCGCG +
Preference number: 4 (lower is better)
Translates to: PKTQQIPILYKVTIHNYSLGCSP*RGSRFA
Trigger: CGCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAG...GCTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR GCA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCTGTTGTCTTCTTGGCTaGAGTCCTTGCCGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: LQQPELRCRLTNFASITCCCLLG*SPCRGS
Trigger: GCTTCCGCGGCAAGGACTGCAGCCAAGAAGACAACA...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCTCGCCCATCATCAGGTaGGCCAGACCTTCCACATTG +
Preference number: 4 (lower is better)
Translates to: LQQPELRCRLTNFASITCSPIIR*ARPSTL
Trigger: CAATGTGGAAGGTCTGGCGCACCTGATGATGGGCGA...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp ACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCATCGCCCATCATCAGGTaGGCCAGACCTTCCACATTG +
Preference number: 4 (lower is better)
Translates to: TLYQSHSTSILSFILTCPSPIIR*ARPSTL
Trigger: CAATGTGGAAGGTCTGGCGCACCTGATGATGGGCGA...TGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR GCA 90 bp CTGAATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCTCGCCCATCATCAGGTaGGCCAGACCTTCCACATTG +
Preference number: 4 (lower is better)
Translates to: LNSYFTLYQSHSTSILSFSPIIR*ARPSTL
Trigger: CAATGTGGAAGGTCTGGCGCACCTGATGATGGGCGA...GAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR GCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTAAATCCTCAATCAACTaGAAACTATGCAGGGAACCC +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVKSSIN*KLCREP
Trigger: GGGTTCCCTGCATAGTTTGCAGTTGATTGAGGATTT...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp GAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGAGTAACTGGAAGTTGTaGACTTCACAGACAAATTCG +
Preference number: 4 (lower is better)
Translates to: EPGSKISLDTDCVSPWSWSNWKL*TSQTNS
Trigger: CGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACT...CCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp GAAGAGGAACCTAATTCCTTCATAATGATCTATGAGCTGTTTCCCTCCCCCAATCTTCTTTTCCTTGGCTaGAGTCCTTGCCGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: EEEPNSFIMIYELFPSPNLLFLG*SPCRGS
Trigger: GCTTCCGCGGCAAGGACTGCAGCCAAGGAAAAGAAG...ATTGGGGGAGGGAAACAGCTCATAGATCATTATGAAGGAATTAGGTTCCTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR GCA 90 bp ACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCACATTGTTGTCTTGGCTaGAGTCCTTGCCGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: TLYQSHSTSILSFILTCPHCCLG*SPCRGS
Trigger: GCTTCCGCGGCAAGGACTGCAGCCAAGACAACAATG...TGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACAAGCGCGGAGCGGGTaGCTGCTCCCAGATTTCCAG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKQARSG*LLPDFQ
Trigger: CTGGAAATCTGGGAGCAGCCACCCGCTCCGCGCTTG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000611589.4
ENST00000628364.2
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCTTCTCGGGGTCCTaGAGTCCGCCGTGCCTAGCA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKVFSGS*SPPCLA
Trigger: TGCTAGGCACGGCGGACTCCAGGACCCCGAGAAGAC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000611589.4
ENST00000628364.2
CDS-3UTR CCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCGCGGGAGGCAAAGTTTaGGGCGCGGGGAGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: CNNIISVHENFPMIASMPAGGKV*GAGRGE
Trigger: CTCTCCTCTCCCCGCGCCCCAAACTTTGCCTCCCGC...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342183.9
CDS-3UTR CCA 90 bp TCCCACTATGGCGATGTTGGCATCGTTTTCGGCTGCCATATTCAGAACTTTCAATGGAAATGGTGGATGTaGTGCGCTCCCAAACTGGAT +
Preference number: 4 (lower is better)
Translates to: SHYGDVGIVFGCHIQNFQWKWWM*CAPKLD
Trigger: ATCCAGTTTGGGAGCGCACCACATCCACCATTTCCA...TTGAAAGTTCTGAATATGGCAGCCGAAAACGATGCCAACATCGCCATAGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR CCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACCATTGGATTCTTCAATaGCGATGTCATCTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHHWILQ*RCHLSQ
Trigger: TTGGGACAGATGACATCGCCATTGAAGAATCCAATG...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGTGTCCACCTGCAACGTaGCATTGCCACCACTCCTCG +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMCPPAT*HCHHSS
Trigger: CGAGGAGTGGTGGCAATGCCACGTTGCAGGTGGACA...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
ENST00000637906.1
CDS-3UTR CCA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCATGGCCCTGGAAGGGCTaGCCCTGCTCTTTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: CRLTNFASITCPHNGSYSWPWKG*PCSFPP
Trigger: TGGCGGGAAAGAGCAGGGCCAGCCCTTCCAGGGCCA...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCACATTTCCCACTATaGCGATGTTGGCATCGTTTT +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHSHFPL*RCWHRF
Trigger: AAAACGATGCCAACATCGCCATAGTGGGAAATGTGA...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCATCTGTGGTCTGGCTAATGGGTTCTTTTGTCGGGGGCTTTCCTCTTCTGGCTTCACATTTCCCACTATaGCGATGTTGGCATCGTTTT +
Preference number: 4 (lower is better)
Translates to: SSVVWLMGSFVGGFPLLASHFPL*RCWHRF
Trigger: AAAACGATGCCAACATCGCCATAGTGGGAAATGTGA...AGCCAGAAGAGGAAAGCCCCCGACAAAAGAACCCATTAGCCAGACCACAGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR CCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTCTGATTGCATGGCAGTaGCTGTTGACTCAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGLIAWQ*LLTQLS
Trigger: TGACAACTGAGTCAACAGCCACTGCCATGCAATCAG...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp CACATTTCCCACTATGGCGATGTTGGCATCGTTTTCGGCTGCCATATTCAGAACCTGATTGCATGGCAGTaGCTGTTGACTCAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: HISHYGDVGIVFGCHIQNLIAWQ*LLTQLS
Trigger: TGACAACTGAGTCAACAGCCACTGCCATGCAATCAG...GTTCTGAATATGGCAGCCGAAAACGATGCCAACATCGCCATAGTGGGAAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR CCA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTACATCTCTGATTGCATaGCAGTGGCTGTTGACTCAG +
Preference number: 4 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTTSLIA*QWLLTQ
Trigger: CTGAGTCAACAGCCACTGCCATGCAATCAGAGATGT...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTACATCTCTGATTGCATaGCAGTGGCTGTTGACTCAG +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGTSLIA*QWLLTQ
Trigger: CTGAGTCAACAGCCACTGCCATGCAATCAGAGATGT...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACATGTCATCTGTGGTCTaGCTAATGGGTTCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHMSSVV*LMGSFV
Trigger: GACAAAAGAACCCATTAGCCAGACCACAGATGACAT...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACGACTCTCGTCCACATaGTATGAGCCTTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGRLSST*YEPSSR
Trigger: CCGGGATGAAGGCTCATACCATGTGGACGAGAGTCG...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTACGACTCTCGTCCACATaGTATGAGCCTTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLRLSST*YEPSSR
Trigger: CCGGGATGAAGGCTCATACCATGTGGACGAGAGTCG...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
CDS-3UTR CCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAGCTTTTCGCACTGCTaGGTTGTTTCTCCTTTACAA +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLSFSHC*VVSPLQ
Trigger: TTGTAAAGGAGAAACAACCCAGCAGTGCGAAAAGCT...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTGTCTTCTCTGGCAATTaGACTGACTTCTCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLVFSGN*TDFSGK
Trigger: CTTTCCTGAGAAGTCAGTCCAATTGCCAGAGAAGAC...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp AAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACAAAAGCATTCTGGAAGGTCGGCTGTGCTaGGACTGCCTCCAACATAGA +
Preference number: 4 (lower is better)
Translates to: KGHLCSFKHSSCLHKSILEGRLC*DCLQHR
Trigger: TCTATGTTGGAGGCAGTCCCAGCACAGCCGACCTTC...CAGAATGCTTTTGTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACAATGCCACCACTCCATaGATCTTCATCTTAGGATCT +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHNATTP*IFILGS
Trigger: AGATCCTAAGATGAAGATCCATGGAGTGGTGGCATT...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTAGAGATGAAAGACTCTaGGGTTTCAAAGGTGATTGG +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVRDERL*GFKGDW
Trigger: CCAATCACCTTTGAAACCCCAGAGTCTTTCATCTCT...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTCATCTGTGGGTGCTTaGCATCTTTCTGATGTCTTG +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGSSVGA*HLSDVL
Trigger: CAAGACATCAGAAAGATGCCAAGCACCCACAGATGA...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTTCATCTGTGGGTGCTTaGCATCTTTCTGATGTCTTG +
Preference number: 4 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLSSVGA*HLSDVL
Trigger: CAAGACATCAGAAAGATGCCAAGCACCCACAGATGA...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp AATGACTGCAGGTCAAGGATTCCAATAAGGAAACAGAAGGTTGCAGATGTTAGACAGTCCACACCTCGGTaGGGAAGACAAGGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: NDCRSRIPIRKQKVADVRQSTPR*GRQGQL
Trigger: AAGCTGGCCTTGTCTTCCCCACCGAGGTGTGGACTG...TCTAACATCTGCAACCTTCTGTTTCCTTATTGGAATCCTTGACCTGCAGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGCAGTCCACACCTCGGTaGGGAAGACAAGGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMQSTPR*GRQGQL
Trigger: AAGCTGGCCTTGTCTTCCCCACCGAGGTGTGGACTG...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTCCTGTCATGGCCTGTTaGTCATCCACTGTTAACTTT +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGPVMAC*SSTVNF
Trigger: AAAGTTAACAGTGGATGACCAACAGGCCATGACAGG...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTCCATTTGACCTGTCATaGCCTGTTGGTCATCCACTG +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCPFDLS*PVGHPL
Trigger: CAGTGGATGACCAACAGGCCATGACAGGTCAAATGG...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCACTTGGCAGGTTGTGCTaGGCCCTTCACATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLALGRLC*ALHILS
Trigger: AGAGAGGATGTGAAGGGCCCAGCACAACCTGCCAAG...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAGAACATGAGTCCTCTTaGCAGGTTGTGCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEEHESS*QVVLGP
Trigger: AGGGCCCAGCACAACCTGCCAAGAGGACTCATGTTC...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCATGCCCTGCACACAGATaGGCGAGAAAAGACACAGAA +
Preference number: 4 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSCPAHR*ARKDTE
Trigger: TTCTGTGTCTTTTCTCGCCCATCTGTGTGCAGGGCA...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378262.7
CDS-3UTR CCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCCAGCACATCAATTaGTTGTGTGTTGGTGATGCA +
Preference number: 4 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVCQHIN*LCVGDA
Trigger: TGCATCACCAACACACAACCAATTGATGTGCTGGCA...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp GAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGCTAATTCCTTGTGCGTaGTCTCACAAGTTGGATTTT +
Preference number: 4 (lower is better)
Translates to: EPGSKISLDTDCVSPWSWLIPCA*SHKLDF
Trigger: AAAATCCAACTTGTGAGACCACGCACAAGGAATTAG...CCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR CCA 90 bp CACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCTCTTCTGTCATAGCATaGGCTTCAGCACCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: HFVPVSQHFHSVIHSNLPSSVIA*ASAPLQ
Trigger: CTGCAGCGGTGCTGAAGCCCATGCTATGACAGAAGA...GGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR CCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGAGCCAGGTTCCACCAGTaGTACCAGGCCAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGARFHQ*YQAKRK
Trigger: CTTCCTTTTGGCCTGGTACCACTGGTGGAACCTGGC...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp GACTTCCCAGCCTCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACCTGCGAGTCTTGAGCTaGAAGCTCATCTCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: DFPASRRLRNKFLLLTSYLRVLS*KLISLS
Trigger: CGAGAGCGAGATGAGCTTCCAGCTCAAGACTCGCAG...GTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGAGGCTGGGAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CCA 90 bp CTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTGTGGTGTTGCGGAACTaGCGGCGGATGCGCACGCTG +
Preference number: 4 (lower is better)
Translates to: LSPKPNKFQSYTKLQYTTVVLRN*RRMRTL
Trigger: CAGCGTGCGCATCCGCCGCCAGTTCCGCAACACCAC...AGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGCACTTGGCCTCCACCTaGTCGATGAAGAGCGTGGTG +
Preference number: 4 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTEHLAST*SMKSVV
Trigger: CACCACGCTCTTCATCGACCAGGTGGAGGCCAAGTG...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATCACTTGGCCTCCACCTaGTCGATGAAGAGCGTGGTG +
Preference number: 4 (lower is better)
Translates to: LYQSHSTSILSFILTCPNHLAST*SMKSVV
Trigger: CACCACGCTCTTCATCGACCAGGTGGAGGCCAAGTG...ATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CCA 90 bp TATTTAATTTGCAGCCATATAATTTGCAAGCATTTGCCCATCCTTTGCAGTGATTTCCCCCGCCGCTGTTaGGCGGCTCATCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: YLICSHIICKHLPILCSDFPRRC*AAHRPA
Trigger: AGCTGGACGATGAGCCGCCCAACAGCGGCGGGGGAA...ATCACTGCAAAGGATGGGCAAATGCTTGCAAATTATATGGCTGCAAATTAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496792.3
CDS-3UTR CCA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCATTCCCCCGCCGCTGTTaGGCGGCTCATCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: CRLTNFASITCPHNGSYSFPRRC*AAHRPA
Trigger: AGCTGGACGATGAGCCGCCCAACAGCGGCGGGGGAA...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCACAGTCGCACACGGCCTaGTCGTCCACCACGGAGCAC +
Preference number: 4 (lower is better)
Translates to: CRLTNFASITCPHNGSYSQSHTA*SSTTEH
Trigger: GTGCTCCGTGGTGGACGACCAGGCCGTGTGCGACTG...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GGTAATATTAGATATTACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGCAGTCGCACACGGCCTaGTCGTCCACCACGGAGCAC +
Preference number: 4 (lower is better)
Translates to: GNIRYYSSISSGGRVVSRQSHTA*SSTTEH
Trigger: GTGCTCCGTGGTGGACGACCAGGCCGTGTGCGACTG...CCTGGATACAACTCTTCCACCTGAACTAATTGATGAGTAATATCTAATATTACC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CCA 90 bp ATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACACAGTCGCACACGGCCTaGTCGTCCACCACGGAGCAC +
Preference number: 4 (lower is better)
Translates to: ILVTGSCALHRQIRYIATQSHTA*SSTTEH
Trigger: GTGCTCCGTGGTGGACGACCAGGCCGTGTGCGACTG...TGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCACATTGTTGTCTTCTTaGCTGCAGTCCTTGCCGCGG +
Preference number: 4 (lower is better)
Translates to: SMKQITPFVINTLAQPSSTLLSS*LQSLPR
Trigger: CCGCGGCAAGGACTGCAGCCAAGAAGACAACAATGT...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCTATGAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTAATTCCTCCAACAGATaGCACAAGGTGGGGATATTC +
Preference number: 4 (lower is better)
Translates to: SMNQEAKSHWTPTVSALGNSSNR*HKVGIF
Trigger: GAATATCCCCACCTTGTGCCATCTGTTGGAGGAATT...ACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTCATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR CCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCCTGCTCGGGTTGGGTTaGCTTAAAGGACCACTGAAA +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFLLGLG*LKGPLK
Trigger: TTTCAGTGGTCCTTTAAGCCAACCCAACCCGAGCAG...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635519.1
CDS-3UTR TCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAGCAATAGGCACTGAATaGTGCTTGCTGCTGCCATGG +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAAIGTE*CLLLPW
Trigger: CCATGGCAGCAGCAAGCATCATTCAGTGCCTATTGC...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR TCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGAGGCCACTTATACGTaGTTTGTCCACCACCTTTGC +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTEATYT*FVHHLC
Trigger: GCAAAGGTGGTGGACAAATCACGTATAAGTGGCCTC...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAATACGGCTTCTTTCTaGACAGTGCTAAAACCTATG +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLNTASF*TVLKPM
Trigger: CATAGGTTTTAGCACTGTTCAGAAAGAAGCCGTATT...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AATGACTGCAGGTCAAGGATTCCAATAAGGAAACAGAAGGTTGCAGATGTTAGAGTAGTCACCCAAGCCTaGAGAACTGTCCACTCGCAC +
Preference number: 4 (lower is better)
Translates to: NDCRSRIPIRKQKVADVRVVTQA*RTVHSH
Trigger: GTGCGAGTGGACAGTTCTTCAGGCTTGGGTGACTAC...TCTAACATCTGCAACCTTCTGTTTCCTTATTGGAATCCTTGACCTGCAGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR TCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGGTAGTCACCCAAGCCTaGAGAACTGTCCACTCGCAC +
Preference number: 4 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTEVVTQA*RTVHSH
Trigger: GTGCGAGTGGACAGTTCTTCAGGCTTGGGTGACTAC...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGGTAGTCACCCAAGCCTaGAGAACTGTCCACTCGCAC +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMVVTQA*RTVHSH
Trigger: GTGCGAGTGGACAGTTCTTCAGGCTTGGGTGACTAC...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
ENST00000637906.1
CDS-3UTR TCA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCGCTGGGACACTCTGCTaGGGCCACAAGGATGTCATC +
Preference number: 4 (lower is better)
Translates to: SFQLQQPELRCRLTNFASAGTLC*GHKDVI
Trigger: GATGACATCCTTGTGGCCTCAGCAGAGTGTCCCAGC...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTACTGTGCTGAGTTACTaGTGTAGTTTCGACTCTCGT +
Preference number: 4 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTTVLSY*CSFDSR
Trigger: ACGAGAGTCGAAACTACATCAGTAACTCAGCACAGT...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTTTTTGTGTTGTGCCTTaGTGCTGTAGTACTCCTTTG +
Preference number: 4 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLFCVVP*CCSTPL
Trigger: CAAAGGAGTACTACAGCATCAAGGCACAACACAAAA...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTTTGTGTTGTGCCTTaGTGCTGTAGTACTCCTTTG +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGFCVVP*CCSTPL
Trigger: CAAAGGAGTACTACAGCATCAAGGCACAACACAAAA...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTTTTGTGTTGTGCCTTaGTGCTGTAGTACTCCTTTG +
Preference number: 4 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVFCVVP*CCSTPL
Trigger: CAAAGGAGTACTACAGCATCAAGGCACAACACAAAA...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp CTGCTGGGTTGTTTCTCCTTTACAACAGCCCCATTGGACTGTGCTGAGTTACTGTTTTGTGTTGTGCCTTaGTGCTGTAGTACTCCTTTG +
Preference number: 4 (lower is better)
Translates to: LLGCFSFTTAPLDCAELLFCVVP*CCSTPL
Trigger: CAAAGGAGTACTACAGCATCAAGGCACAACACAAAA...CAGTAACTCAGCACAGTCCAATGGGGCTGTTGTAAAGGAGAAACAACCCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635519.1
ENST00000637906.1
CDS-3UTR TCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTCAGAAAGGGGCTTTTTaGATGTGTTCCTACACAAGT +
Preference number: 4 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVQKGAF*MCSYTS
Trigger: ACTTGTGTAGGAACACATTCAAAAAGCCCCTTTCTG...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTCAGAAAGGGGCTTTTTaGATGTGTTCCTACACAAGT +
Preference number: 4 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLQKGAF*MCSYTS
Trigger: ACTTGTGTAGGAACACATTCAAAAAGCCCCTTTCTG...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp GAAGAGGAACCTAATTCCTTCATAATGATCTATGAGCTGTTTCCCTCCCCCAATGCCGATTTCCCAGTGTaGAGCATCAGTCCATTCCTC +
Preference number: 4 (lower is better)
Translates to: EEEPNSFIMIYELFPSPNADFPV*SISPFL
Trigger: GAGGAATGGACTGATGCTTCACACTGGGAAATCGGC...ATTGGGGGAGGGAAACAGCTCATAGATCATTATGAAGGAATTAGGTTCCTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000625891.2
ENST00000628515.2
CDS-3UTR TCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTACTGATATTGTCACCTaGCGCAGATTCCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSTDIVT*RRFLVT
Trigger: AGTCACCAGGAATCTGCGTCAGGTGACAATATCAGT...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625672.2
CDS-3UTR TCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTAAGAATCCCATCCACTaGTATTGTCACCTGACGCAG +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCKNPIH*YCHLTQ
Trigger: CTGCGTCAGGTGACAATATCAGTGGATGGGATTCTT...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625672.2
CDS-3UTR TCA 90 bp AGGGAAATAAGCATTTCAGAGCATTTCGGGGGCACAAAGAGACCAGGAAATGCAAAGAATCCCATCCACTaGTATTGTCACCTGACGCAG +
Preference number: 4 (lower is better)
Translates to: REISISEHFGGTKRPGNAKNPIH*YCHLTQ
Trigger: CTGCGTCAGGTGACAATATCAGTGGATGGGATTCTT...TGCATTTCCTGGTCTCTTTGTGCCCCCGAAATGCTCTGAAATGCTTATTTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626249.2
CDS-3UTR TCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTCTGGGGTTTCAAAGGTaGTTGGGTCTAAAGTTGCAA +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGLGFQR*LGLKLQ
Trigger: TTGCAACTTTAGACCCAATCACCTTTGAAACCCCAG...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCGAGTACGCAACGTGTTaGCAGAAATGGTACCTGACC +
Preference number: 4 (lower is better)
Translates to: SMKQITPFVINTLAQPSSEYATC*QKWYLT
Trigger: GGTCAGGTACCATTTCTGTCAACACGTTGCGTACTC...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGAGTACGCAACGTGTTaGCAGAAATGGTACCTGACC +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTEYATC*QKWYLT
Trigger: GGTCAGGTACCATTTCTGTCAACACGTTGCGTACTC...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCTTTTGCTGTTTCCTTTaGGCAGGAAGGCTTCACTCC +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFFCCFL*AGRLHS
Trigger: GGAGTGAAGCCTTCCTGCTCAAAGGAAACAGCAAAA...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTATGACTACGGGGAGCTaGATTTTCATAAACATGCTC +
Preference number: 4 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLMTTGS*IFINML
Trigger: GAGCATGTTTATGAAAATTCAGCTCCCCGTAGTCAT...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAACAGCCTCCGTATGCATaGCTACGGGGAGCTGAATTT +
Preference number: 4 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEQPPYA*LRGAEF
Trigger: AAATTCAGCTCCCCGTAGTCATGCATACGGAGGCTG...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCCAGCCTCCGTATGCATaGCTACGGGGAGCTGAATTT +
Preference number: 4 (lower is better)
Translates to: LQQPELRCRLTNFASITCQPPYA*LRGAEF
Trigger: AAATTCAGCTCCCCGTAGTCATGCATACGGAGGCTG...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATTGCAGAGTGGTCCACTaGAGGAAGTCATACTACAGT +
Preference number: 4 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHCRVVH*RKSYYS
Trigger: ACTGTAGTATGACTTCCTTCAGTGGACCACTCTGCA...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGGACAGGAGAGCTCCCTaGCTCAGTGGGAGATCAAGA +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMDRRAP*LSGRSR
Trigger: TCTTGATCTCCCACTGAGTCAGGGAGCTCTCCTGTC...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378262.7
ENST00000412315.5
ENST00000635519.1
CDS-3UTR TCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAATCAAAGCGAATTTCCTaGGGTCTATGGATAAGGCGA +
Preference number: 4 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKSKRIS*GLWIRR
Trigger: TCGCCTTATCCATAGACCTCAGGAAATTCGCTTTGA...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR TCA 90 bp GTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATGTTTTCATGCTCGAGCCAGAGCCTaGAGCATGCATCGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: VSQHFHSVIHSNLPKCFHARARA*SMHRSK
Trigger: CTTTGACCGATGCATGCTTCAGGCTCTGGCTCGAGC...ATGAAAACATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR TCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGACAGGAAGCCAGCAGTaGGCCAGTATCCTTGGATGC +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMTGSQQ*ASILGC
Trigger: GCATCCAAGGATACTGGCTCACTGCTGGCTTCCTGT...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR TCA 90 bp AAATGTCCATTTGACTCTTTAAAATGGACAGTTGAAACCACCGCCCCCAAACAAACAGGAAGCCAGCAGTaGGCCAGTATCCTTGGATGC +
Preference number: 4 (lower is better)
Translates to: KCPFDSLKWTVETTAPKQTGSQQ*ASILGC
Trigger: GCATCCAAGGATACTGGCTCACTGCTGGCTTCCTGT...TTGTTTGGGGGCGGTGGTTTCAACTGTCCATTTTAAAGAGTCAAATGGACATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR TCA 90 bp TTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAAACAGGAAGCCAGCAGTaGGCCAGTATCCTTGGATGC +
Preference number: 4 (lower is better)
Translates to: FVPVSQHFHSVIHSNLPKTGSQQ*ASILGC
Trigger: GCATCCAAGGATACTGGCTCACTGCTGGCTTCCTGT...TTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR TCA 90 bp TTCAGAATAAACCAAGTACATCACTGCTTACCAACAGCACCTATGGCTAACAGTACAGGAAGCCAGCAGTaGGCCAGTATCCTTGGATGC +
Preference number: 4 (lower is better)
Translates to: FRINQVHHCLPTAPMANSTGSQQ*ASILGC
Trigger: GCATCCAAGGATACTGGCTCACTGCTGGCTTCCTGT...ACTGTTAGCCATAGGTGCTGTTGGTAAGCAGTGATGTACTTGGTTTATTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR TCA 90 bp CTGAATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCCCAACTGGAAAACGTTaGCCCCAGTGGTACAGGGTA +
Preference number: 4 (lower is better)
Translates to: LNSYFTLYQSHSTSILSFPTGKR*PQWYRV
Trigger: TACCCTGTACCACTGGGGTCAACGTTTTCCAGTTGG...GAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR TCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGTGGTCCTGGACACCGTaGCGAAGAAATAAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTEWSWTP*RRNKGP
Trigger: GGGACCCTTATTTCTTCGTCACGGTGTCCAGGACCA...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATGGTCCTGGACACCGTaGCGAAGAAATAAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: FVPVSQHFHSVIHSNLPKWSWTP*RRNKGP
Trigger: GGGACCCTTATTTCTTCGTCACGGTGTCCAGGACCA...TTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR TCA 90 bp CTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTGGGCGCTGCGAGTCTTaGGCTGGAAGCTCATCTCGC +
Preference number: 4 (lower is better)
Translates to: LSPKPNKFQSYTKLQYTTGRCES*AGSSSR
Trigger: GCGAGATGAGCTTCCAGCTCAAGACTCGCAGCGCCC...AGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR TCA 90 bp AGATCTACTCTTCACAAAGAGAATAAGGCTTATGCACTTTCAGAATGTGTAACTGGGCGCTGCGAGTCTTaGGCTGGAAGCTCATCTCGC +
Preference number: 4 (lower is better)
Translates to: RSTLHKENKAYALSECVTGRCES*AGSSSR
Trigger: GCGAGATGAGCTTCCAGCTCAAGACTCGCAGCGCCC...AGTTACACATTCTGAAAGTGCATAAGCCTTATTCTCTTTGTGAAGAGTAGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACCTCCACCTGGTCGATaGAGAGCGTGGTGTTGCGGA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKPPPGR*RAWCCG
Trigger: TCCGCAACACCACGCTCTTCATCGACCAGGTGGAGG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACCCAGTTTATGGTCCTCCACCTGGTCGATaGAGAGCGTGGTGTTGCGGA +
Preference number: 4 (lower is better)
Translates to: SRRLRNKFLLLTSYPVYGPPPGR*RAWCCG
Trigger: TCCGCAACACCACGCTCTTCATCGACCAGGTGGAGG...ACCATAAACTGGGTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp CCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGCCCTGCGCTTGGACTTaGCCTCCACCCACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: PQNPTNSNLIQSYNTQLQPCAWT*PPPTWP
Trigger: AGGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGG...CTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACGACGAAAAGGCCGCTaGACACCGTCATGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKRRKGR*TPSCPC
Trigger: GCAGGGACATGACGGTGTTCAGCGGCCTTTTCGTCG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp CCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGCCACGAATCCACCCCTTaGAGGGCTCCCGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: PKTQQIPILYKVTIHNYSHESTP*RAPAPS
Trigger: TGAGGGAGCGGGAGCCCTTCAAGGGGTGGATTCGTG...GCTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGGACCTGCGAGGAGTTaGCCCTCACGTCACGAATCC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKGPARS*PSRHES
Trigger: GGATTCGTGACGTGAGGGTCAACTCCTCGCAGGTCC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTGGAGCAAGATCTCAATaGAGCAAATCACCCCATTTG +
Preference number: 4 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTGARSQ*SKSPHL
Trigger: CAAATGGGGTGATTTGCTTCATTGAGATCTTGCTCC...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp CTTCCCACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGATTAACTTGTGCTCCTaGGCTATTAACCAGCTATTA +
Preference number: 4 (lower is better)
Translates to: LPTVCGCELRGSSIARVEINLCS*AINQLL
Trigger: TAATAGCTGGTTAATAGCTCAGGAGCACAAGTTAAT...CTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGTGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp GACTTCCCAGCCTCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACTCCGAACCCACAAAATaGCGGATTAGGAGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: DFPASRRLRNKFLLLTSYSEPTK*RIRRGG
Trigger: TCCCCCTCTCCTAATCCGTCATTTTGTGGGTTCGGA...GTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGAGGCTGGGAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp TCCCACTATGGCGATGTTGGCATCGTTTTCGGCTGCCATATTCAGAACTTTCAAATTTTTCCCTGGTGCTaGAGCCTCAGATGCATTGAG +
Preference number: 4 (lower is better)
Translates to: SHYGDVGIVFGCHIQNFQIFPWC*SLRCIE
Trigger: CTCAATGCATCTGAGGCTTCAGCACCAGGGAAAAAT...TTGAAAGTTCTGAATATGGCAGCCGAAAACGATGCCAACATCGCCATAGTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR TCA 90 bp TCTATGAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTGGTGTGCTCCAGAGCTaGATATTTGAAGATCACATA +
Preference number: 4 (lower is better)
Translates to: SMNQEAKSHWTPTVSALGGVLQS*IFEDHI
Trigger: TATGTGATCTTCAAATATTCAGCTCTGGAGCACACC...ACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTCATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS-3UTR GCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAAAATGGTGGATGTGGTaGGCTCCCAAACTGGATGCC +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLKWWMW*APKLDA
Trigger: GGCATCCAGTTTGGGAGCGCACCACATCCACCATTT...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000637906.1
CDS-3UTR GCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGATGGAAGGGCTGGCCCTaGTCTTTCCCGCCAATTATT +
Preference number: 4 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGWKGWP*SFPPII
Trigger: AATAATTGGCGGGAAAGAGCAGGGCCAGCCCTTCCA...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCCTGGATACGGCTCTCTaGCGCCTGCTCGGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: CNNIISVHENFPMIASMPLDTAL*RLLGLG
Trigger: ACCCAACCCGAGCAGGCGGCAGAGAGCCGTATCCAG...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCTTGGTTTTTGTGTTGTaGCTTGATGCTGTAGTACTC +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLLVFVL*LDAVVL
Trigger: GAGTACTACAGCATCAAGGCACAACACAAAAACCAA...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAAACCACTGCTCCAGTTaGACCAGGCGGCAAACTCTT +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLNHCSS*TRRQTL
Trigger: AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTT...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp GTGACCCTGGAAGGTCGGCTGTGCTGGGACTGCCTCCAACATAGAAAAAGTCATGTGACTTTCACATCATaGCAGGCATTATCATTAAAC +
Preference number: 4 (lower is better)
Translates to: VTLEGRLCWDCLQHRKSHVTFTS*QALSLN
Trigger: GTTTAATGATAATGCCTGGCATGATGTGAAAGTCAC...ATGACTTTTTCTATGTTGGAGGCAGTCCCAGCACAGCCGACCTTCCAGGGTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626249.2
CDS-3UTR GCA 90 bp ATAATCAGCCGATTTCCCAGTGTGAAGCATCAGTCCATTCCTCTGAAGGGTTTTCGGCTGTGCTGGGACTaGCTCCAACATAGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: IISRFPSVKHQSIPLKGFRLCWD*LQHRKS
Trigger: ACTTTTTCTATGTTGGAGGCAGTCCCAGCACAGCCG...AAAACCCTTCAGAGGAATGGACTGATGCTTCACACTGGGAAATCGGCTGATTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626249.2
CDS-3UTR GCA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCATCTTAGGATCTCCTTaGTTGGCAAGTCGAGATAAT +
Preference number: 4 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCILGSP*LASRDN
Trigger: ATTATCTCGACTTGCCAAGCAAGGAGATCCTAAGAT...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAACATCAGAATGCCATATaGACGCTGGGATCGGAACCG +
Preference number: 4 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEHQNAI*TLGSEP
Trigger: CGGTTCCGATCCCAGCGTGCATATGGCATTCTGATG...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTTCTCGATCTGTCCGTTaGAGAAAAGAGCATCGGAGA +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSSRSVR*RKEHRR
Trigger: TCTCCGATGCTCTTTTCTGCAACGGACAGATCGAGA...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTTCTCGATCTGTCCGTTaGAGAAAAGAGCATCGGAGA +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCSRSVR*RKEHRR
Trigger: TCTCCGATGCTCTTTTCTGCAACGGACAGATCGAGA...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCCCTCTTGGCAGGTTGTaGTGGGCCCTTCACATCCTC +
Preference number: 4 (lower is better)
Translates to: SFQLQQPELRCRLTNFASPLGRL*WALHIL
Trigger: GAGGATGTGAAGGGCCCAGCACAACCTGCCAAGAGG...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTGCAAGTTTTCACAGTaGCATCTCATATCCATGTCT +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHCKFSQ*HLISMS
Trigger: AGACATGGATATGAGATGGCACTGTGAAAACTTGCA...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378262.7
ENST00000412315.5
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCAGGGCCAAGCTAAGATaGCAGCACATCAATTGGTTG +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFRAKLR*QHINWL
Trigger: CAACCAATTGATGTGCTGGCATCTTAGCTTGGCCCT...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR GCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCTTTTCTCTCTGCCTCTaGAGGGCCAAGCTAAGATGC +
Preference number: 4 (lower is better)
Translates to: SMKQITPFVINTLAQPSSFSLCL*RAKLRC
Trigger: GCATCTTAGCTTGGCCCTGCAGAGGCAGAGAGAAAA...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR GCA 90 bp CACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCTTTTCTCTCTGCCTCTaGAGGGCCAAGCTAAGATGC +
Preference number: 4 (lower is better)
Translates to: HFVPVSQHFHSVIHSNLPFSLCL*RAKLRC
Trigger: GCATCTTAGCTTGGCCCTGCAGAGGCAGAGAGAAAA...GGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR GCA 90 bp TCTGAATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTGGGCTTCAGCACCGCTaGAGCCAAAGCCTAATTCCT +
Preference number: 4 (lower is better)
Translates to: SEFLLHFVPVSQHFHSVIGLQHR*SQSLIP
Trigger: AGGAATTAGGCTTTGGCTGCAGCGGTGCTGAAGCCC...AATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR GCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAATTGGATGCTTGTGAATaGCTCAAGTCTGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKLDACE*LKSVSF
Trigger: GAAGGAGACAGACTTGAGGCATTCACAAGCATCCAA...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR GCA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCATCCACGGGCAGGACCTaGGAGGAGTTGACCCTCACG +
Preference number: 4 (lower is better)
Translates to: CRLTNFASITCPHNGSYSSTGRT*EELTLT
Trigger: CGTGAGGGTCAACTCCTCGCAGGTCCTGCCCGTGGA...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp CCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGCTCCACGGGCAGGACCTaGGAGGAGTTGACCCTCACG +
Preference number: 4 (lower is better)
Translates to: PKTQQIPILYKVTIHNYSSTGRT*EELTLT
Trigger: CGTGAGGGTCAACTCCTCGCAGGTCCTGCCCGTGGA...GCTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR GCA 90 bp ACATGTCTCCAGCTGACTTCGCCATTTTTGTCATGTACACATGATAAGGGATTTTGTTGTCTTCTTGGCTaGAGTCCTTGCCGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: TCLQLTSPFLSCTHDKGFCCLLG*SPCRGS
Trigger: GCTTCCGCGGCAAGGACTGCAGCCAAGAAGACAACA...AAATCCCTTATCATGTGTACATGACAAAAATGGCGAAGTCAGCTGGAGACATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR GCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGTCGCCCATCATCAGGTaGGCCAGACCTTCCACATTG +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMSPIIR*ARPSTL
Trigger: CAATGTGGAAGGTCTGGCGCACCTGATGATGGGCGA...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTATATTTGCTACTGTATaGACGTTTGGATCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVIFATV*TFGSSS
Trigger: GCTGGAAGATCCAAACGTGCATACAGTAGCAAATAT...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCATATTTGCTACTGTATaGACGTTTGGATCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLIFATV*TFGSSS
Trigger: GCTGGAAGATCCAAACGTGCATACAGTAGCAAATAT...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp CAGATGGCACAAGGTGGGGATATTCACATAAGACAGACTTGGATTGATGTTATGTGCTGCGGAGCGAGGTaGTTTTACCTTTGCATCGTC +
Preference number: 4 (lower is better)
Translates to: QMAQGGDIHIRQTWIDVMCCGAR*FYLCIV
Trigger: GACGATGCAAAGGTAAAAGCACCTCGCTCCGCAGCA...CATAACATCAATCCAAGTCTGTCTTATGTGAATATCCCCACCTTGTGCCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS-3UTR GCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTAAATCCTCAATCAACTaGAAACTATGCAGGGAACCC +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGKSSIN*KLCREP
Trigger: GGGTTCCCTGCATAGTTTGCAGTTGATTGAGGATTT...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTGGTCTTCCCTTCAAATaGAGCCTTCTTTACTTTCCC +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGGLPFK*SLLYFP
Trigger: GGGAAAGTAAAGAAGGCTGCATTTGAAGGGAAGACC...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp GTTGACTCAGTTGTCATAGAGGAAGGCACTTCACCAACCAGTCTCACATTTCCCTGTCTAGCATCTGGATaGAGAAGATCTGGATGCAGT +
Preference number: 4 (lower is better)
Translates to: VDSVVIEEGTSPTSLTFPCLASG*RRSGCS
Trigger: ACTGCATCCAGATCTTCTGCATCCAGATGCTAGACA...GGGAAATGTGAGACTGGTTGGTGAAGTGCCTTCCTCTATGACAACTGAGTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACAGAAGCAGACCCCATaGAATCCAGGCGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKQKQTP*NPGAPS
Trigger: GGAAGGGGCGCCTGGATTCCATGGGGTCTGCTTCTG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000628364.2
CDS-3UTR CCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCGTGCGTGCCGGCGGGTaGGGGGCCGAGAAATTGTTT +
Preference number: 4 (lower is better)
Translates to: CNNIISVHENFPMIASMPVRAGG*GAEKLF
Trigger: AAACAATTTCTCGGCCCCCCACCCGCCGGCACGCAC...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342183.9
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACGAGGCGAATGCAGCTaGAGAGGGGCTTGTCCGGAA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKRGECS*RGACPE
Trigger: TTCCGGACAAGCCCCTCTCCAGCTGCATTCGCCTCG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000611589.4
ENST00000628364.2
CDS-3UTR CCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTTGGAAATGGTGGATGTaGTGCGCTCCCAAACTGGAT +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTWKWWM*CAPKLD
Trigger: ATCCAGTTTGGGAGCGCACCACATCCACCATTTCCA...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR CCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTACTGCCATGGAAATGGTaGATGTGGTGCGCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLLPWKW*MWCAPK
Trigger: TTTGGGAGCGCACCACATCCACCATTTCCATGGCAG...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000637906.1
CDS-3UTR CCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCACTCCAATTTTTCCCTaGTGTATATGCAGTTCTAGG +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLTPIFP*CICSSR
Trigger: CCTAGAACTGCATATACACCAGGGAAAAATTGGAGT...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTACCACTATGGCGATGTTaGCATCGTTTTCGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLPLWRC*HRFRLP
Trigger: TGGCAGCCGAAAACGATGCCAACATCGCCATAGTGG...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
ENST00000637906.1
CDS-3UTR CCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCACCACTATGGCGATGTTaGCATCGTTTTCGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAPLWRC*HRFRLP
Trigger: TGGCAGCCGAAAACGATGCCAACATCGCCATAGTGG...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGCGACTCTCGTCCACATaGTATGAGCCTTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTERLSST*YEPSSR
Trigger: CCGGGATGAAGGCTCATACCATGTGGACGAGAGTCG...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGGAAGGTCGGCTGTGCTaGGACTGCCTCCAACATAGA +
Preference number: 4 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTEEGRLC*DCLQHR
Trigger: TCTATGTTGGAGGCAGTCCCAGCACAGCCGACCTTC...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TTCAGAATAAACCAAGTACATCACTGCTTACCAACAGCACCTATGGCTAACAGTGAAGGTCGGCTGTGCTaGGACTGCCTCCAACATAGA +
Preference number: 4 (lower is better)
Translates to: FRINQVHHCLPTAPMANSEGRLC*DCLQHR
Trigger: TCTATGTTGGAGGCAGTCCCAGCACAGCCGACCTTC...ACTGTTAGCCATAGGTGCTGTTGGTAAGCAGTGATGTACTTGGTTTATTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CCA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCCAGTCCACACCTCGGTaGGGAAGACAAGGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SFQLQQPELRCRLTNFASQSTPR*GRQGQL
Trigger: AAGCTGGCCTTGTCTTCCCCACCGAGGTGTGGACTG...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTATGCCATATGCACGCTaGGATCGGAACCGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTMPYAR*DRNRKE
Trigger: TTCCTTACGGTTCCGATCCCAGCGTGCATATGGCAT...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCAAGCACACACCTTGATTaGAACATGAGTCCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSSTHLD*NMSPLG
Trigger: GCCAAGAGGACTCATGTTCCAATCAAGGTGTGTGCT...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCAAGGGTCATTGCAGAGTaGTCCACTGAAGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSRVIAE*STEGSH
Trigger: ATGACTTCCTTCAGTGGACCACTCTGCAATGACCCT...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTAGCTCCCTGACTCAGTaGGAGATCAAGATGATAAAT +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGSSLTQ*EIKMIN
Trigger: ATTTATCATCTTGATCTCCCACTGAGTCAGGGAGCT...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378262.7
ENST00000412315.5
ENST00000635519.1
CDS-3UTR CCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCAATATCCATGTCTGTCTaGCTACCCTGCGTGCTTAGA +
Preference number: 4 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSISMSV*LPCVLR
Trigger: TCTAAGCACGCAGGGTAGCCAGACAGACATGGATAT...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378262.7
ENST00000412315.5
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCATATCCATGTCTGTCTaGCTACCCTGCGTGCTTAGA +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFISMSV*LPCVLR
Trigger: TCTAAGCACGCAGGGTAGCCAGACAGACATGGATAT...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378262.7
ENST00000412315.5
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCCTAATTCCTTGTGCGTaGTCTCACAAGTTGGATTTT +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLLIPCA*SHKLDF
Trigger: AAAATCCAACTTGTGAGACCACGCACAAGGAATTAG...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTATCTTCTGTCATAGCATaGGCTTCAGCACCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLSSVIA*ASAPLQ
Trigger: CTGCAGCGGTGCTGAAGCCCATGCTATGACAGAAGA...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp CAACAGATGGCACAAGGTGGGGATATTCACATAAGACAGACTTGGATTGATGTTTCTTCTGTCATAGCATaGGCTTCAGCACCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: QQMAQGGDIHIRQTWIDVSSVIA*ASAPLQ
Trigger: CTGCAGCGGTGCTGAAGCCCATGCTATGACAGAAGA...AACATCAATCCAAGTCTGTCTTATGTGAATATCCCCACCTTGTGCCATCTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR CCA 90 bp GAAGAGGAACCTAATTCCTTCATAATGATCTATGAGCTGTTTCCCTCCCCCAATTCTTCTGTCATAGCATaGGCTTCAGCACCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: EEEPNSFIMIYELFPSPNSSVIA*ASAPLQ
Trigger: CTGCAGCGGTGCTGAAGCCCATGCTATGACAGAAGA...ATTGGGGGAGGGAAACAGCTCATAGATCATTATGAAGGAATTAGGTTCCTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CCA 90 bp TTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAAGCCAGGTTCCACCAGTaGTACCAGGCCAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: FVPVSQHFHSVIHSNLPKARFHQ*YQAKRK
Trigger: CTTCCTTTTGGCCTGGTACCACTGGTGGAACCTGGC...TTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR CCA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAAAGCAGGCGTTCCACTTaGGGAAGCGCGTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKSRRST*GSASIG
Trigger: GCCAATGGACGCGCTTCCCCAAGTGGAACGCCTGCT...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAGCAGGCGTTCCACTTaGGGAAGCGCGTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKSRRST*GSASIG
Trigger: GCCAATGGACGCGCTTCCCCAAGTGGAACGCCTGCT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp ACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAACATTGTTGTCTTCTTaGCTGCAGTCCTTGCCGCGG +
Preference number: 4 (lower is better)
Translates to: TLYQSHSTSILSFILTCPTLLSS*LQSLPR
Trigger: CCGCGGCAAGGACTGCAGCCAAGAAGACAACAATGT...TGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR CCA 90 bp GTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATGTTTTCATAGGAAAAGGCGGTGGTaGAGCCTGAGAAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: VSQHFHSVIHSNLPKCFHRKRRW*SLRRLG
Trigger: ACCCAGCCTTCTCAGGCTCCACCACCGCCTTTTCCT...ATGAAAACATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS-3UTR CCA 90 bp TTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAAGGAGAGGGAAAGAGCTaGGAAGGAAAAGGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: FVPVSQHFHSVIHSNLPKGEGKS*EGKGGG
Trigger: ACCACCGCCTTTTCCTTCCCAGCTCTTTCCCTCTCC...TTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS-3UTR CCA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTTCTGATGGATTGCTGTaGATTCGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTSDGLL*IRVCVC
Trigger: ACACACACACACACGAATCCACAGCAATCCATCAGA...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTCTTCTTAAGGTTACCTaGGAGCAAGATCTCAATGAA +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVLLKVT*EQDLNE
Trigger: TTCATTGAGATCTTGCTCCCAGGTAACCTTAAGAAG...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCCTTCTTAAGGTTACCTaGGAGCAAGATCTCAATGAA +
Preference number: 4 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCLLKVT*EQDLNE
Trigger: TTCATTGAGATCTTGCTCCCAGGTAACCTTAAGAAG...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp ACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGGTAACAACAGATGGCACAAGGTaGGGATATTCACATAAGACA +
Preference number: 4 (lower is better)
Translates to: TVCGCELRGSSIARVEVTTDGTR*GYSHKT
Trigger: TGTCTTATGTGAATATCCCCACCTTGTGCCATCTGT...TGTTACCTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR CCA 90 bp ATTTGCAGCCATATAATTTGCAAGCATTTGCCCATCCTTTGCAGTGATGGTTTGACAGAGCCCATACCTTaGTCGCCCATCATCAGGTGC +
Preference number: 4 (lower is better)
Translates to: ICSHIICKHLPILCSDGLTEPIP*SPIIRC
Trigger: GCACCTGATGATGGGCGACCAAGGTATGGGCTCTGT...CAAACCATCACTGCAAAGGATGGGCAAATGCTTGCAAATTATATGGCTGCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496792.3
CDS-3UTR CCA 90 bp TTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATTCCACATTGTTGTCTTaGCTGCAGTCCTTGCCGCGG +
Preference number: 4 (lower is better)
Translates to: LYQSHSTSILSFILTCPNSTLLS*LQSLPR
Trigger: CCGCGGCAAGGACTGCAGCCAAGACAACAATGTGGA...ATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS-3UTR CCA 90 bp CAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCGAGGATGGTTTTAAATaGCAAATTACACATGCTTCT +
Preference number: 4 (lower is better)
Translates to: QNLTGHRLCQPLVLDFPAEDGFK*QITHAS
Trigger: AGAAGCATGTGTAATTTGCCATTTAAAACCATCCTC...GGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR CAA 72 bp GTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTaGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATT +
Preference number: 4 (lower is better)
Translates to: VAPGGKLLKVCR*SHSKGQSSLAI
Trigger: AATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR CAA 72 bp CAGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACGTTaGAGAAATAAGTTTCTGTTACTTACAAGCTACCCA +
Preference number: 4 (lower is better)
Translates to: QPLVLDFPASRR*RNKFLLLTSYP
Trigger: TGGGTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
3UTR CAA 72 bp TCACCAACCAGTCTCACATTTCCCACTATGGCGATGTaGGCATCGTTTTCGGCTGCCATATTCAGAACTTTC +
Preference number: 4 (lower is better)
Translates to: SPTSLTFPTMAM*ASFSAAIFRTF
Trigger: GAAAGTTCTGAATATGGCAGCCGAAAACGATGCCAACATCGCCATAGTGGGAAATGTGAGACTGGTTGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR TCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGAGTCCTCACTTCTACATaGCAGACATCCACCGCGAAT +
Preference number: 4 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGVLTST*QTSTAN
Trigger: ATTCGCGGTGGATGTCTGTCATGTAGAAGTGAGGAC...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR TCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGTCGCAAGGATGCCGGTaGCCTGTAGATTGCAATAGG +
Preference number: 4 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTESQGCR*PVDCNR
Trigger: CCTATTGCAATCTACAGGTCACCGGCATCCTTGCGA...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342183.9
CDS-3UTR TCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTAATACGGCTTCTTTCTaGACAGTGCTAAAACCTATG +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGNTASF*TVLKPM
Trigger: CATAGGTTTTAGCACTGTTCAGAAAGAAGCCGTATT...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCCATGGCAGTGGCTGTTaGCTCAGTTGTCATAGAGGA +
Preference number: 4 (lower is better)
Translates to: LQQPELRCRLTNFASITCHGSGC*LSCHRG
Trigger: TCCTCTATGACAACTGAGTCAACAGCCACTGCCATG...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTACATGGCAGTGGCTGTTaGCTCAGTTGTCATAGAGGA +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLHGSGC*LSCHRG
Trigger: TCCTCTATGACAACTGAGTCAACAGCCACTGCCATG...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
ENST00000637906.1
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGCTGGGACACTCTGCTaGGGCCACAAGGATGTCATC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKAGTLC*GHKDVI
Trigger: GATGACATCCTTGTGGCCTCAGCAGAGTGTCCCAGC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000412315.5
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000630656.1
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
CDS-3UTR TCA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAAGCTGGGACACTCTGCTaGGGCCACAAGGATGTCATC +
Preference number: 4 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKAGTLC*GHKDVI
Trigger: GATGACATCCTTGTGGCCTCAGCAGAGTGTCCCAGC...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACCGGATCACTTCTGCTaGGCCTGGATACGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKPDHFC*AWIRLS
Trigger: AGAGAGCCGTATCCAGGCTCAGCAGAAGTGATCCGG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000412315.5
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000630656.1
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
CDS-3UTR TCA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAACCGGATCACTTCTGCTaGGCCTGGATACGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKPDHFC*AWIRLS
Trigger: AGAGAGCCGTATCCAGGCTCAGCAGAAGTGATCCGG...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGCTCGTCCACATGGTATaGGCCTTCATCCCGGTTTCT +
Preference number: 4 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTELVHMV*AFIPVS
Trigger: AGAAACCGGGATGAAGGCTCATACCATGTGGACGAG...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTACTGTGCTGAGTTACTaGTGTAGTTTCGACTCTCGT +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCTVLSY*CSFDSR
Trigger: ACGAGAGTCGAAACTACATCAGTAACTCAGCACAGT...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCAACTGTGCTGAGTTACTaGTGTAGTTTCGACTCTCGT +
Preference number: 4 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSTVLSY*CSFDSR
Trigger: ACGAGAGTCGAAACTACATCAGTAACTCAGCACAGT...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTACTGTGCTGAGTTACTaGTGTAGTTTCGACTCTCGT +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSTVLSY*CSFDSR
Trigger: ACGAGAGTCGAAACTACATCAGTAACTCAGCACAGT...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATACTGTGCTGAGTTACTaGTGTAGTTTCGACTCTCGT +
Preference number: 4 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHTVLSY*CSFDSR
Trigger: ACGAGAGTCGAAACTACATCAGTAACTCAGCACAGT...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
CDS-3UTR TCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCTACTCCTTTGCTTTATaGATGCGTGCGGTCATCACT +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFYSFAL*MRAVIT
Trigger: AGTGATGACCGCACGCATTCATAAAGCAAAGGAGTA...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTTTTTGTGTTGTGCCTTaGTGCTGTAGTACTCCTTTG +
Preference number: 4 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTFCVVP*CCSTPL
Trigger: CAAAGGAGTACTACAGCATCAAGGCACAACACAAAA...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCCATAATAAGCGTGCATaGAAATTTCCCAATGATTGC +
Preference number: 4 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCHNKRA*KFPNDC
Trigger: GCAATCATTGGGAAATTTTCATGCACGCTTATTATG...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCCATAATAAGCGTGCATaGAAATTTCCCAATGATTGC +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLHNKRA*KFPNDC
Trigger: GCAATCATTGGGAAATTTTCATGCACGCTTATTATG...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCTGCTTCAAAGGCCCCTaGTCCCAAATTAATGACCAG +
Preference number: 4 (lower is better)
Translates to: SMKQITPFVINTLAQPSSCFKGP*SQINDQ
Trigger: CTGGTCATTAATTTGGGATCAGGGGCCTTTGAAGCA...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp ATAATCAGCCGATTTCCCAGTGTGAAGCATCAGTCCATTCCTCTGAAGGGTTTTACTGATATTGTCACCTaGCGCAGATTCCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: IISRFPSVKHQSIPLKGFTDIVT*RRFLVT
Trigger: AGTCACCAGGAATCTGCGTCAGGTGACAATATCAGT...AAAACCCTTCAGAGGAATGGACTGATGCTTCACACTGGGAAATCGGCTGATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626249.2
CDS-3UTR TCA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCTGCTTGGCATCTTTCTaGTGTCTTGGCTTGCCATGG +
Preference number: 4 (lower is better)
Translates to: LQQPELRCRLTNFASITCCLASF*CLGLPW
Trigger: CCATGGCAAGCCAAGACATCAGAAAGATGCCAAGCA...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AATGACTGCAGGTCAAGGATTCCAATAAGGAAACAGAAGGTTGCAGATGTTAGACAGCCTCCGTATGCATaGCTACGGGGAGCTGAATTT +
Preference number: 4 (lower is better)
Translates to: NDCRSRIPIRKQKVADVRQPPYA*LRGAEF
Trigger: AAATTCAGCTCCCCGTAGTCATGCATACGGAGGCTG...TCTAACATCTGCAACCTTCTGTTTCCTTATTGGAATCCTTGACCTGCAGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR TCA 90 bp AAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACAAAAGCATTCTGGACCTTTGCCTAGATTaGCCGTCAGTTTCACACGTC +
Preference number: 4 (lower is better)
Translates to: KGHLCSFKHSSCLHKSILDLCLD*PSVSHV
Trigger: GACGTGTGAAACTGACGGTCAATCTAGGCAAAGGTC...CAGAATGCTTTTGTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR TCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTGCCACTCGTTATCATTaGGGTTATAGCCAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGATRYH*GYSQQK
Trigger: TTTTTGCTGGCTATAACCTCAATGATAACGAGTGGC...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGTTGCTGGTGTCCCTTaGTATCATCACGTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLVAGVP*YHHVVP
Trigger: TGGCACAACGTGATGATATCAAGGGACACCAGCAAC...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAATATATAAGTCACTCTTaGGGTCTAAGTTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKYISHS*GLSSWL
Trigger: GAGCCAGGAACTTAGACCTCAAGAGTGACTTATATA...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTTATATAAGTCACTCTTaGGGTCTAAGTTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGYISHS*GLSSWL
Trigger: GAGCCAGGAACTTAGACCTCAAGAGTGACTTATATA...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTACCTTGATTGGAACATaGGTCCTCTTGGCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTTLIGT*VLLAGC
Trigger: ACAACCTGCCAAGAGGACTCATGTTCCAATCAAGGT...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCGACAGGAGAGCTCCCTaGCTCAGTGGGAGATCAAGA +
Preference number: 4 (lower is better)
Translates to: SFQLQQPELRCRLTNFASDRRAP*LSGRSR
Trigger: TCTTGATCTCCCACTGAGTCAGGGAGCTCTCCTGTC...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412315.5
ENST00000635519.1
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGCTCGAGCCAGAGCCTaGAGCATGCATCGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKARARA*SMHRSK
Trigger: CTTTGACCGATGCATGCTTCAGGCTCTGGCTCGAGC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
CDS-3UTR TCA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCACAGGAAGCCAGCAGTaGGCCAGTATCCTTGGATGC +
Preference number: 4 (lower is better)
Translates to: SFQLQQPELRCRLTNFASTGSQQ*ASILGC
Trigger: GCATCCAAGGATACTGGCTCACTGCTGGCTTCCTGT...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR TCA 90 bp ATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCCCAACTGGAAAACGTTaGCCCCAGTGGTACAGGGTA +
Preference number: 4 (lower is better)
Translates to: IPTSLCTSLTALPFCHSFPTGKR*PQWYRV
Trigger: TACCCTGTACCACTGGGGTCAACGTTTTCCAGTTGG...GAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR TCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGCCAACTGGAAAACGTTaGCCCCAGTGGTACAGGGTA +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMPTGKR*PQWYRV
Trigger: TACCCTGTACCACTGGGGTCAACGTTTTCCAGTTGG...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR TCA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCACCTCCACCTGGTCGATaGAGAGCGTGGTGTTGCGGA +
Preference number: 4 (lower is better)
Translates to: CRLTNFASITCPHNGSYSPPPGR*RAWCCG
Trigger: TCCGCAACACCACGCTCTTCATCGACCAGGTGGAGG...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp CTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTCCTCCACCTGGTCGATaGAGAGCGTGGTGTTGCGGA +
Preference number: 4 (lower is better)
Translates to: LSPKPNKFQSYTKLQYTTPPPGR*RAWCCG
Trigger: TCCGCAACACCACGCTCTTCATCGACCAGGTGGAGG...AGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR TCA 90 bp AGATCTACTCTTCACAAAGAGAATAAGGCTTATGCACTTTCAGAATGTGTAACTCCTCCACCTGGTCGATaGAGAGCGTGGTGTTGCGGA +
Preference number: 4 (lower is better)
Translates to: RSTLHKENKAYALSECVTPPPGR*RAWCCG
Trigger: TCCGCAACACCACGCTCTTCATCGACCAGGTGGAGG...AGTTACACATTCTGAAAGTGCATAAGCCTTATTCTCTTTGTGAAGAGTAGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp ACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGTCTTAACAATTACAATCGACGAAAAGGCCGCTaGACACCGTCATGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: THQLVQVEELYPGLNNYNRRKGR*TPSCPC
Trigger: GCAGGGACATGACGGTGTTCAGCGGCCTTTTCGTCG...ATTGTAATTGTTAAGACCTGGATACAACTCTTCCACCTGAACTAATTGATGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCGGACCTGCGAGGAGTTaGCCCTCACGTCACGAATCC +
Preference number: 4 (lower is better)
Translates to: CNNIISVHENFPMIASMPGPARS*PSRHES
Trigger: GGATTCGTGACGTGAGGGTCAACTCCTCGCAGGTCC...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TTAGATATTACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGTCTTAACGGACCTGCGAGGAGTTaGCCCTCACGTCACGAATCC +
Preference number: 4 (lower is better)
Translates to: LDITHQLVQVEELYPGLNGPARS*PSRHES
Trigger: GGATTCGTGACGTGAGGGTCAACTCCTCGCAGGTCC...GTTAAGACCTGGATACAACTCTTCCACCTGAACTAATTGATGAGTAATATCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCATTGAAGATTGTGAGCTaGCGCCCTTTGTCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLALKIVS*RPLSSS
Trigger: GCTACTCGACAAAGGGCGTCAGCTCACAATCTTCAA...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000625672.2
CDS-3UTR TCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTATCTTCCAGCATATCTaGTGGATTGCTGTGGATTCG +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSIFQHI*WIAVDS
Trigger: CGAATCCACAGCAATCCATCAGATATGCTGGAAGAT...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATGGAGCAAGATCTCAATaGAGCAAATCACCCCATTTG +
Preference number: 4 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHGARSQ*SKSPHL
Trigger: CAAATGGGGTGATTTGCTTCATTGAGATCTTGCTCC...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCGGAGCAAGATCTCAATaGAGCAAATCACCCCATTTG +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFGARSQ*SKSPHL
Trigger: CAAATGGGGTGATTTGCTTCATTGAGATCTTGCTCC...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCGCAACCAATTTTTCCTaGAACATCAACTTGCAATGT +
Preference number: 4 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCATNFS*NINLQC
Trigger: ACATTGCAAGTTGATGTTTCAGGAAAAATTGGTTGC...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCAAGGTGCTGTATGTCTaGAATCCAGGCCACTTCTTG +
Preference number: 4 (lower is better)
Translates to: SMKQITPFVINTLAQPSSKVLYV*NPGHFL
Trigger: CAAGAAGTGGCCTGGATTTCAGACATACAGCACCTT...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCTTAACTGGCTTTCCCTaGGTAAGACTGAATGAGACG +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFLTGFP*VRLNET
Trigger: CGTCTCATTCAGTCTTACTCAGGGAAAGCCAGTTAA...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAACTATGCAGGGAACCCTaGTATGTTTGGTATGAAGAT +
Preference number: 4 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKLCREP*YVWYED
Trigger: ATCTTCATACCAAACATATCAGGGTTCCCTGCATAG...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTTTATGCCAAGTCGTGTaGAATCCTCAATCAACTGCA +
Preference number: 4 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTLCQVV*NPQSTA
Trigger: TGCAGTTGATTGAGGATTTCACACGACTTGGCATAA...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTTTATGCCAAGTCGTGTaGAATCCTCAATCAACTGCA +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGLCQVV*NPQSTA
Trigger: TGCAGTTGATTGAGGATTTCACACGACTTGGCATAA...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGAAGAAAACCCCTTTaGTACCCAATCACACAAAGC +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGRRKPL*YPITQS
Trigger: GCTTTGTGTGATTGGGTATCAAAGGGGTTTTCTTCT...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000636345.1
CDS-3UTR TCA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTAGAAGAAAACCCCTTTaGTACCCAATCACACAAAGC +
Preference number: 4 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTRRKPL*YPITQS
Trigger: GCTTTGTGTGATTGGGTATCAAAGGGGTTTTCTTCT...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000636345.1
CDS-3UTR TCA 90 bp TGCAGTTTCCAAACCCTGAGTTGTTATGGAGCACAGAAGGATCAACATCAACTCTCGAGAGAAAGGACTTaGGAGGAGGATGAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: CSFQTLSCYGAQKDQHQLSRERT*EEDEEG
Trigger: ACCTTCTTCATCCTCCTCTCAAGTCCTTTCTCTCGA...GAGTTGATGTTGATCCTTCTGTGCTCCATAACAACTCAGGGTTTGGAAACTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR TCA 90 bp CAGATGGCACAAGGTGGGGATATTCACATAAGACAGACTTGGATTGATGTTATGGGACACATCACAAAGTaGGACCAGTGCTTACCTCGA +
Preference number: 4 (lower is better)
Translates to: QMAQGGDIHIRQTWIDVMGHITK*DQCLPR
Trigger: TCGAGGTAAGCACTGGTCTCACTTTGTGATGTGTCC...CATAACATCAATCCAAGTCTGTCTTATGTGAATATCCCCACCTTGTGCCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR TCA 90 bp TGCAGTTTCCAAACCCTGAGTTGTTATGGAGCACAGAAGGATCAACATCAACTCGCAGTTTCCAAACCCTaGGTTGTTATGGAGCACAGA +
Preference number: 4 (lower is better)
Translates to: CSFQTLSCYGAQKDQHQLAVSKP*VVMEHR
Trigger: TCTGTGCTCCATAACAACTCAGGGTTTGGAAACTGC...GAGTTGATGTTGATCCTTCTGTGCTCCATAACAACTCAGGGTTTGGAAACTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR TCA 90 bp ACATGTCTCCAGCTGACTTCGCCATTTTTGTCATGTACACATGATAAGGGATTTTCCGAACCCACAAAATaGCGGATTAGGAGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: TCLQLTSPFLSCTHDKGFSEPTK*RIRRGG
Trigger: TCCCCCTCTCCTAATCCGTCATTTTGTGGGTTCGGA...AAATCCCTTATCATGTGTACATGACAAAAATGGCGAAGTCAGCTGGAGACATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR TCA 90 bp ATAATCAGCCGATTTCCCAGTGTGAAGCATCAGTCCATTCCTCTGAAGGGTTTTCTCCCACTGATGAGGTaGGTTGAACCAAAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: IISRFPSVKHQSIPLKGFLPLMR*VEPKEE
Trigger: TTCTTCCTTTGGTTCAACTCACCTCATCAGTGGGAG...AAAACCCTTCAGAGGAATGGACTGATGCTTCACACTGGGAAATCGGCTGATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626249.2
CDS-3UTR TCA 90 bp ACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGGTAACAAGTTTTCCTGCTAGATaGCACAAACATAAAGGTGCA +
Preference number: 4 (lower is better)
Translates to: TVCGCELRGSSIARVEVTSFPAR*HKHKGA
Trigger: TGCACCTTTATGTTTGTGTCATCTAGCAGGAAAACT...TGTTACCTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACATAGCCGAGGCGAATaGAGCTGGAGAGGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKHSRGE*SWRGAC
Trigger: ACAAGCCCCTCTCCAGCTGCATTCGCCTCGGCTATG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000611589.4
ENST00000628364.2
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATCCTGGAGTCCGCCGTaGCTAGCACCCCAAACAATC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKSWSPP*LAPQTI
Trigger: GATTGTTTGGGGTGCTAGGCACGGCGGACTCCAGGA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000611589.4
ENST00000628364.2
CDS-3UTR GCA 90 bp ATATTATACTTCAAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACTATGGCCAGTCTGTCTaGTCGTGTACTGGGTCGGTC +
Preference number: 4 (lower is better)
Translates to: ILYFKGHLCSFKHSSCLHYGQSV*SCTGSV
Trigger: GACCGACCCAGTACACGAGCAGACAGACTGGCCATA...GTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTTGAAGTATAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR GCA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACCCCATCATTAATGATTaGATTGGATTCTTCAATGGC +
Preference number: 4 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHPIIND*IGFFNG
Trigger: GCCATTGAAGAATCCAATGCAATCATTAATGATGGG...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCCTTTGCTTTATGAATaGGTGCGGTCATCACTGTCT +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSPLLYE*VRSSLS
Trigger: AGACAGTGATGACCGCACGCATTCATAAAGCAAAGG...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTCCTTTGCTTTATGAATaGGTGCGGTCATCACTGTCT +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCPLLYE*VRSSLS
Trigger: AGACAGTGATGACCGCACGCATTCATAAAGCAAAGG...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCAGCTGTAGTACTCCTTTaGTTTATGAATGCGTGCGGT +
Preference number: 4 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSAVVLL*FMNACG
Trigger: ACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGGTTTTTGTGTTGTaGCTTGATGCTGTAGTACTC +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGLVFVL*LDAVVL
Trigger: GAGTACTACAGCATCAAGGCACAACACAAAAACCAA...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGAACCACTGCTCCAGTTaGACCAGGCGGCAAACTCTT +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMNHCSS*TRRQTL
Trigger: AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTT...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGCAAGTTCCAACCACTaGTCCAGTTGCACCAGGCGG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKASSNH*SSCTRR
Trigger: CCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCACGGCTGTGCTGGGACTaGCTCCAACATAGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLARLCWD*LQHRKS
Trigger: ACTTTTTCTATGTTGGAGGCAGTCCCAGCACAGCCG...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp GAAGAGGAACCTAATTCCTTCATAATGATCTATGAGCTGTTTCCCTCCCCCAATCGGCTGTGCTGGGACTaGCTCCAACATAGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: EEEPNSFIMIYELFPSPNRLCWD*LQHRKS
Trigger: ACTTTTTCTATGTTGGAGGCAGTCCCAGCACAGCCG...ATTGGGGGAGGGAAACAGCTCATAGATCATTATGAAGGAATTAGGTTCCTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000625891.2
ENST00000628515.2
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACTGGAAGGTCGGCTGTaGTGGGACTGCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKLEGRL*WDCLQH
Trigger: ATGTTGGAGGCAGTCCCAGCACAGCCGACCTTCCAG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCACCCATCCCTGCACATaGCATTGTTTTTGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: SMKQITPFVINTLAQPSSTHPCT*HCFCKG
Trigger: ACCCTTGCAAAAACAATGGCATGTGCAGGGATGGGT...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGCATCAGAATGCCATATaGACGCTGGGATCGGAACCG +
Preference number: 4 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTEHQNAI*TLGSEP
Trigger: CGGTTCCGATCCCAGCGTGCATATGGCATTCTGATG...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCTGGTTGCCATCAGAATaGCATATGCACGCTGGGATC +
Preference number: 4 (lower is better)
Translates to: LQQPELRCRLTNFASITCWLPSE*HMHAGI
Trigger: GATCCCAGCGTGCATATGGCATTCTGATGGCAACCA...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGAAGGTGACAGGATCTaGTATGATGTTCCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTEGDRI*YDVPEA
Trigger: GGCTTCAGGAACATCATAGCAGATCCTGTCACCTTC...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCTCTCGATCTGTCCGTTaGAGAAAAGAGCATCGGAGA +
Preference number: 4 (lower is better)
Translates to: SMKQITPFVINTLAQPSSSRSVR*RKEHRR
Trigger: TCTCCGATGCTCTTTTCTGCAACGGACAGATCGAGA...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACCTCTTGGCAGGTTGTaGTGGGCCCTTCACATCCTC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKPLGRL*WALHIL
Trigger: GAGGATGTGAAGGGCCCAGCACAACCTGCCAAGAGG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp GCACAGAAGGATCAACATCAACTCTGTAAGGACACATCACAAAGTGAGACCAGTCCAGAGCCTGAAGCATaGATCGGTCAAAGCGAATTT +
Preference number: 4 (lower is better)
Translates to: AQKDQHQLCKDTSQSETSPEPEA*IGQSEF
Trigger: AAATTCGCTTTGACCGATGCATGCTTCAGGCTCTGG...ACTGGTCTCACTTTGTGATGTGTCCTTACAGAGTTGATGTTGATCCTTCTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405581.3
CDS-3UTR GCA 90 bp GACTTCCCAGCCTCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACTTTTCTCTCTGCCTCTaGAGGGCCAAGCTAAGATGC +
Preference number: 4 (lower is better)
Translates to: DFPASRRLRNKFLLLTSYFSLCL*RAKLRC
Trigger: GCATCTTAGCTTGGCCCTGCAGAGGCAGAGAGAAAA...GTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGAGGCTGGGAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR GCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTAAGCCTAATTCCTTGTaGGTGGTCTCACAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSKPNSL*VVSQVG
Trigger: TCCAACTTGTGAGACCACGCACAAGGAATTAGGCTT...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR GCA 90 bp CACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAGACCAAAGGGAGGATaGACTTTGGAGACAACGTTC +
Preference number: 4 (lower is better)
Translates to: HFVPVSQHFHSVIHSNLPRPKGG*TLETTF
Trigger: GAACGTTGTCTCCAAAGTGCATCCTCCCTTTGGTCT...GGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR GCA 90 bp TTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACACAGTGTTGTCTTCTTGGCTaGAGTCCTTGCCGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: LVTGSCALHRQIRYIATQCCLLG*SPCRGS
Trigger: GCTTCCGCGGCAAGGACTGCAGCCAAGAAGACAACA...CTGTGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAATTACGTGACGCCGGGTaGTGTCCTTCTGAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: AVVLLCFMNACGHHCLLELRDAG*CPSERE
Trigger: TTCTCTTTCAGAAGGACAGCACCCGGCGTCACGTAA...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404971.5
ENST00000406316.6
CDS-3UTR GCA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCTTACGTGACGCCGGGTaGTGTCCTTCTGAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: LQQPELRCRLTNFASITCLRDAG*CPSERE
Trigger: TTCTCTTTCAGAAGGACAGCACCCGGCGTCACGTAA...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404971.5
ENST00000406316.6
CDS-3UTR GCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTGCATATCTGATGGATTaGTGTGGATTCGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSAYLMD*CGFVCV
Trigger: CACACACACGAATCCACAGCAATCCATCAGATATGC...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTGCATATCTGATGGATTaGTGTGGATTCGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCAYLMD*CGFVCV
Trigger: CACACACACGAATCCACAGCAATCCATCAGATATGC...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTTTTGCTTCCATAACCTaGCCACATAATGGTTCTTAT +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVFASIT*PHNGSY
Trigger: ATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAA...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCAGGTGCTTTTACCTTTaGATCGTCCCCTTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: FTLYQSHSTSILSFILTCRCFYL*IVPLQG
Trigger: CCCCTGCAAGGGGACGATGCAAAGGTAAAAGCACCT...GCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS-3UTR GCA 90 bp GTGACCCTGGAAGGTCGGCTGTGCTGGGACTGCCTCCAACATAGAAAAAGTCATAAAGAGACCAGGAAATaGATAATAATTGCAGGAACA +
Preference number: 4 (lower is better)
Translates to: VTLEGRLCWDCLQHRKSHKETRK*IIIAGT
Trigger: TGTTCCTGCAATTATTATGCATTTCCTGGTCTCTTT...ATGACTTTTTCTATGTTGGAGGCAGTCCCAGCACAGCCGACCTTCCAGGGTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626249.2
CDS-3UTR GCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTTCATCTGTGGTTACCTaGAAGTTTTCACAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGSSVVT*KFSQCH
Trigger: ATGGCACTGTGAAAACTTGCAGGTAACCACAGATGA...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636345.1
CDS-3UTR GCA 90 bp TCCCACTATGGCGATGTTGGCATCGTTTTCGGCTGCCATATTCAGAACTTTCAATGCAGAAGATCTGGATaGAGTGAAAGACTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: SHYGDVGIVFGCHIQNFQCRRSG*SERLKG
Trigger: GCCTTTGAGTCTTTCACTGCATCCAGATCTTCTGCA...TTGAAAGTTCTGAATATGGCAGCCGAAAACGATGCCAACATCGCCATAGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR GCA 90 bp GTTGACTCAGTTGTCATAGAGGAAGGCACTTCACCAACCAGTCTCACATTTCCCAGTGTACTTTGTCTTTaGTCTTGTTCCTGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: VDSVVIEEGTSPTSLTFPSVLCL*SCSCLV
Trigger: GACAAGGCAGGAACAAGAGCAAAGACAAAGTACACT...GGGAAATGTGAGACTGGTTGGTGAAGTGCCTTCCTCTATGACAACTGAGTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACTGCTGCCATGGAAATaGTGGATGTGGTGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKLLPWK*WMWCAP
Trigger: GGGAGCGCACCACATCCACCATTTCCATGGCAGCAG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000611589.4
ENST00000628364.2
ENST00000637906.1
CDS-3UTR CCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTACTCCAATTTTTCCCTaGTGTATATGCAGTTCTAGG +
Preference number: 4 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLTPIFP*CICSSR
Trigger: CCTAGAACTGCATATACACCAGGGAAAAATTGGAGT...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp CACATTTCCCACTATGGCGATGTTGGCATCGTTTTCGGCTGCCATATTCAGAACCATTGGATTCTTCAATaGCGATGTCATCTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: HISHYGDVGIVFGCHIQNHWILQ*RCHLSQ
Trigger: TTGGGACAGATGACATCGCCATTGAAGAATCCAATG...GTTCTGAATATGGCAGCCGAAAACGATGCCAACATCGCCATAGTGGGAAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATGTCCACCTGCAACGTaGCATTGCCACCACTCCTCG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKCPPAT*HCHHSS
Trigger: CGAGGAGTGGTGGCAATGCCACGTTGCAGGTGGACA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000637906.1
CDS-3UTR CCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGCCACTATGGCGATGTTaGCATCGTTTTCGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMPLWRC*HRFRLP
Trigger: TGGCAGCCGAAAACGATGCCAACATCGCCATAGTGG...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
ENST00000637906.1
CDS-3UTR CCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTACATCTCTGATTGCATaGCAGTGGCTGTTGACTCAG +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTTSLIA*QWLLTQ
Trigger: CTGAGTCAACAGCCACTGCCATGCAATCAGAGATGT...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTATGTCATCTGTGGTCTaGCTAATGGGTTCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTMSSVV*LMGSFV
Trigger: GACAAAAGAACCCATTAGCCAGACCACAGATGACAT...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCGTCTTCTCTGGCAATTaGACTGACTTCTCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFVFSGN*TDFSGK
Trigger: CTTTCCTGAGAAGTCAGTCCAATTGCCAGAGAAGAC...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATGTCTTCTCTGGCAATTaGACTGACTTCTCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHVFSGN*TDFSGK
Trigger: CTTTCCTGAGAAGTCAGTCCAATTGCCAGAGAAGAC...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTGTCTTCTCTGGCAATTaGACTGACTTCTCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCVFSGN*TDFSGK
Trigger: CTTTCCTGAGAAGTCAGTCCAATTGCCAGAGAAGAC...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCGAAGGTCGGCTGTGCTaGGACTGCCTCCAACATAGA +
Preference number: 4 (lower is better)
Translates to: SFQLQQPELRCRLTNFASEGRLC*DCLQHR
Trigger: TCTATGTTGGAGGCAGTCCCAGCACAGCCGACCTTC...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGAGATGAAAGACTCTaGGGTTTCAAAGGTGATTGG +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGRDERL*GFKGDW
Trigger: CCAATCACCTTTGAAACCCCAGAGTCTTTCATCTCT...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCACCTTTATCATCTGTaGGTGCTTGGCATCTTTCTG +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSHLYHL*VLGIFL
Trigger: CAGAAAGATGCCAAGCACCCACAGATGATAAAGGTG...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACAGTCCACACCTCGGTaGGGAAGACAAGGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKQSTPR*GRQGQL
Trigger: AAGCTGGCCTTGTCTTCCCCACCGAGGTGTGGACTG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp AAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACAAAAGCATTCTGCCATTTGACCTGTCATaGCCTGTTGGTCATCCACTG +
Preference number: 4 (lower is better)
Translates to: KGHLCSFKHSSCLHKSILPFDLS*PVGHPL
Trigger: CAGTGGATGACCAACAGGCCATGACAGGTCAAATGG...CAGAATGCTTTTGTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAACCATTTGACCTGTCATaGCCTGTTGGTCATCCACTG +
Preference number: 4 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEPFDLS*PVGHPL
Trigger: CAGTGGATGACCAACAGGCCATGACAGGTCAAATGG...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCATCAATCTTTACAGTGTaGAGGTTGCTGGTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSSIFTV*RLLVSL
Trigger: AAGGGACACCAGCAACCTCCACACTGTAAAGATTGA...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp ATATTATACTTCAAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACCTTGGCAGGTTGTGCTaGGCCCTTCACATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: ILYFKGHLCSFKHSSCLHLGRLC*ALHILS
Trigger: AGAGAGGATGTGAAGGGCCCAGCACAACCTGCCAAG...GTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTTGAAGTATAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CCA 90 bp ATATTATACTTCAAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACGAACATGAGTCCTCTTaGCAGGTTGTGCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: ILYFKGHLCSFKHSSCLHEHESS*QVVLGP
Trigger: AGGGCCCAGCACAACCTGCCAAGAGGACTCATGTTC...GTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTTGAAGTATAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CCA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCAAGGATGTCATCTGTaGTCTGCAAGTTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTQGCHL*SASFHS
Trigger: ACTGTGAAAACTTGCAGACCACAGATGACATCCTTG...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378262.7
ENST00000412315.5
ENST00000635519.1
CDS-3UTR CCA 90 bp CACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCTGTCTCCTTCAGATGTaGTGTCTTACAGCAGAACGG +
Preference number: 4 (lower is better)
Translates to: HFVPVSQHFHSVIHSNLPCLLQM*CLTAER
Trigger: CCGTTCTGCTGTAAGACACCACATCTGAAGGAGACA...GGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR CCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTAGGGAGGATGCACTTTaGAGACAACGTTCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSREDAL*RQRSGK
Trigger: TTTTCCAGAACGTTGTCTCCAAAGTGCATCCTCCCT...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCAAGGGAGGATGCACTTTaGAGACAACGTTCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSREDAL*RQRSGK
Trigger: TTTTCCAGAACGTTGTCTCCAAAGTGCATCCTCCCT...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp AATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTGCGAGTCTTGAGCTaGAAGCTCATCTCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: NSYFTLYQSHSTSILSFILRVLS*KLISLS
Trigger: CGAGAGCGAGATGAGCTTCCAGCTCAAGACTCGCAG...AATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACACTTGGCCTCCACCTaGTCGATGAAGAGCGTGGTG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKHLAST*SMKSVV
Trigger: CACCACGCTCTTCATCGACCAGGTGGAGGCCAAGTG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp ATATGCACCAAACACAGGCATTTCAACAGTAAGGGTCTGTCAACATTCACAAACACATTGTTGTCTTCTTaGCTGCAGTCCTTGCCGCGG +
Preference number: 4 (lower is better)
Translates to: ICTKHRHFNSKGLSTFTNTLLSS*LQSLPR
Trigger: CCGCGGCAAGGACTGCAGCCAAGAAGACAACAATGT...GTTTGTGAATGTTGACAGACCCTTACTGTTGAAATGCCTGTGTTTGGTGCATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAACCGAATTTTATTTCTTaGCTGCAGTCCTTGCCGCGG +
Preference number: 4 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEPNFIS*LQSLPR
Trigger: CCGCGGCAAGGACTGCAGCCAAGAAATAAAATTCGG...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404971.5
CDS-3UTR CCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTCCTTTACTTTTACCTTaGTCGCCCATCATCAGGTGC +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTPLLLP*SPIIRC
Trigger: GCACCTGATGATGGGCGACCAAGGTAAAAGTAAAGG...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTTCTGATGGATTGCTGTaGATTCGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCSDGLL*IRVCVC
Trigger: ACACACACACACACGAATCCACAGCAATCCATCAGA...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATTCTGATGGATTGCTGTaGATTCGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHSDGLL*IRVCVC
Trigger: ACACACACACACACGAATCCACAGCAATCCATCAGA...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTAAGGGTAGGGTTATGTaGCCTTTCTTTGATGTCTTA +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGKGRVM*PFFDVL
Trigger: TAAGACATCAAAGAAAGGCCACATAACCCTACCCTT...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000636345.1
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACGGCGGAAAGGCAGCTaGGAAGAAGATGCAGACGAA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKRRKGS*EEDADE
Trigger: TTCGTCTGCATCTTCTTCTCAGCTGCCTTTCCGCCG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000628364.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTAGTCACCCAAGCCTaGAGAACTGTCCACTCGCAC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKVVTQA*RTVHSH
Trigger: GTGCGAGTGGACAGTTCTTCAGGCTTGGGTGACTAC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000637906.1
CDS-3UTR TCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCATGCCACCACTCCTCGTaGAACGAACTACATGGTATT +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLACHHSS*NELHGI
Trigger: AATACCATGTAGTTCGTTTCACGAGGAGTGGTGGCA...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGCATGGCAGTGGCTGTTaGCTCAGTTGTCATAGAGGA +
Preference number: 4 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTEHGSGC*LSCHRG
Trigger: TCCTCTATGACAACTGAGTCAACAGCCACTGCCATG...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCACCGGATCACTTCTGCTaGGCCTGGATACGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: CRLTNFASITCPHNGSYSPDHFC*AWIRLS
Trigger: AGAGAGCCGTATCCAGGCTCAGCAGAAGTGATCCGG...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGCTCTGGCAATTGGACTaGCTTCTCAGGAAAGCGCTA +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMLWQLD*LLRKAL
Trigger: TAGCGCTTTCCTGAGAAGTCAGTCCAATTGCCAGAG...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCAGAAAGGGGCTTTTTaGATGTGTTCCTACACAAGT +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSQKGAF*MCSYTS
Trigger: ACTTGTGTAGGAACACATTCAAAAAGCCCCTTTCTG...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTCATAATAAGCGTGCATaGAAATTTCCCAATGATTGC +
Preference number: 4 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVHNKRA*KFPNDC
Trigger: GCAATCATTGGGAAATTTTCATGCACGCTTATTATG...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp CTGCTGGGTTGTTTCTCCTTTACAACAGCCCCATTGGACTGTGCTGAGTTACTGCATAATAAGCGTGCATaGAAATTTCCCAATGATTGC +
Preference number: 4 (lower is better)
Translates to: LLGCFSFTTAPLDCAELLHNKRA*KFPNDC
Trigger: GCAATCATTGGGAAATTTTCATGCACGCTTATTATG...CAGTAACTCAGCACAGTCCAATGGGGCTGTTGTAAAGGAGAAACAACCCAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635519.1
CDS-3UTR TCA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTATCAGTCCATTCCTCTaGAGGGTTTTAAATGACAGA +
Preference number: 4 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTISPFL*RVLNDR
Trigger: TCTGTCATTTAAAACCCTTCAGAGGAATGGACTGAT...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp ATATTATACTTCAAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACGCCGATTTCCCAGTGTaGAGCATCAGTCCATTCCTC +
Preference number: 4 (lower is better)
Translates to: ILYFKGHLCSFKHSSCLHADFPV*SISPFL
Trigger: GAGGAATGGACTGATGCTTCACACTGGGAAATCGGC...GTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTTGAAGTATAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR TCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGATGCTTCAAAGGCCCCTaGTCCCAAATTAATGACCAG +
Preference number: 4 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGCFKGP*SQINDQ
Trigger: CTGGTCATTAATTTGGGATCAGGGGCCTTTGAAGCA...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACAAAAGCATTCTGACTGATATTGTCACCTaGCGCAGATTCCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: KGHLCSFKHSSCLHKSILTDIVT*RRFLVT
Trigger: AGTCACCAGGAATCTGCGTCAGGTGACAATATCAGT...CAGAATGCTTTTGTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR TCA 90 bp GAAGAGGAACCTAATTCCTTCATAATGATCTATGAGCTGTTTCCCTCCCCCAATACTGATATTGTCACCTaGCGCAGATTCCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: EEEPNSFIMIYELFPSPNTDIVT*RRFLVT
Trigger: AGTCACCAGGAATCTGCGTCAGGTGACAATATCAGT...ATTGGGGGAGGGAAACAGCTCATAGATCATTATGAAGGAATTAGGTTCCTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000625891.2
ENST00000628515.2
CDS-3UTR TCA 90 bp GAAGAGGAACCTAATTCCTTCATAATGATCTATGAGCTGTTTCCCTCCCCCAATAAGAATCCCATCCACTaGTATTGTCACCTGACGCAG +
Preference number: 4 (lower is better)
Translates to: EEEPNSFIMIYELFPSPNKNPIH*YCHLTQ
Trigger: CTGCGTCAGGTGACAATATCAGTGGATGGGATTCTT...ATTGGGGGAGGGAAACAGCTCATAGATCATTATGAAGGAATTAGGTTCCTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000625891.2
ENST00000628515.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTGTTACTGACTGGTaGCCCTGGAAGGTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKVVTDW*PWKVGC
Trigger: ACAGCCGACCTTCCAGGGTCACCAGTCAGTAACAAC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AATGACTGCAGGTCAAGGATTCCAATAAGGAAACAGAAGGTTGCAGATGTTAGAGAGTACGCAACGTGTTaGCAGAAATGGTACCTGACC +
Preference number: 4 (lower is better)
Translates to: NDCRSRIPIRKQKVADVREYATC*QKWYLT
Trigger: GGTCAGGTACCATTTCTGTCAACACGTTGCGTACTC...TCTAACATCTGCAACCTTCTGTTTCCTTATTGGAATCCTTGACCTGCAGTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR TCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTATTTTGCTGTTTCCTTTaGGCAGGAAGGCTTCACTCC +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLFCCFL*AGRLHS
Trigger: GGAGTGAAGCCTTCCTGCTCAAAGGAAACAGCAAAA...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTGCCACTCGTTATCATTaGGGTTATAGCCAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSATRYH*GYSQQK
Trigger: TTTTTGCTGGCTATAACCTCAATGATAACGAGTGGC...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AATGACTGCAGGTCAAGGATTCCAATAAGGAAACAGAAGGTTGCAGATGTTAGAGTTGCTGGTGTCCCTTaGTATCATCACGTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: NDCRSRIPIRKQKVADVRVAGVP*YHHVVP
Trigger: TGGCACAACGTGATGATATCAAGGGACACCAGCAAC...TCTAACATCTGCAACCTTCTGTTTCCTTATTGGAATCCTTGACCTGCAGTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAAAGAGCATCGGAGATaGGGTCCGGAAGCCGTCCAT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKKEHRR*GPEAVH
Trigger: ATGGACGGCTTCCGGACCTCATCTCCGATGCTCTTT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAACCTTGATTGGAACATaGGTCCTCTTGGCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLATLIGT*VLLAGC
Trigger: ACAACCTGCCAAGAGGACTCATGTTCCAATCAAGGT...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAACCTTGATTGGAACATaGGTCCTCTTGGCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: AVVLLCFMNACGHHCLLETLIGT*VLLAGC
Trigger: ACAACCTGCCAAGAGGACTCATGTTCCAATCAAGGT...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACAAAAGCATTCTGTGCAAGCACACACCTTaGTTGGAACATGAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: KGHLCSFKHSSCLHKSILCKHTP*LEHESS
Trigger: AGAGGACTCATGTTCCAATCAAGGTGTGTGCTTGCA...CAGAATGCTTTTGTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR TCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTATGCAAGCACACACCTTaGTTGGAACATGAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLCKHTP*LEHESS
Trigger: AGAGGACTCATGTTCCAATCAAGGTGTGTGCTTGCA...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAATGCAAGCACACACCTTaGTTGGAACATGAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: AVVLLCFMNACGHHCLLECKHTP*LEHESS
Trigger: AGAGGACTCATGTTCCAATCAAGGTGTGTGCTTGCA...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAATGCAGAGTGGTCCACTaGAGGAAGTCATACTACAGT +
Preference number: 4 (lower is better)
Translates to: AVVLLCFMNACGHHCLLECRVVH*RKSYYS
Trigger: ACTGTAGTATGACTTCCTTCAGTGGACCACTCTGCA...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCATGCAGAGTGGTCCACTaGAGGAAGTCATACTACAGT +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLACRVVH*RKSYYS
Trigger: ACTGTAGTATGACTTCCTTCAGTGGACCACTCTGCA...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCTGCAGAGTGGTCCACTaGAGGAAGTCATACTACAGT +
Preference number: 4 (lower is better)
Translates to: LQQPELRCRLTNFASITCCRVVH*RKSYYS
Trigger: ACTGTAGTATGACTTCCTTCAGTGGACCACTCTGCA...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TGCAGTTTCCAAACCCTGAGTTGTTATGGAGCACAGAAGGATCAACATCAACTCTCAAAGCGAATTTCCTaGGGTCTATGGATAAGGCGA +
Preference number: 4 (lower is better)
Translates to: CSFQTLSCYGAQKDQHQLSKRIS*GLWIRR
Trigger: TCGCCTTATCCATAGACCTCAGGAAATTCGCTTTGA...GAGTTGATGTTGATCCTTCTGTGCTCCATAACAACTCAGGGTTTGGAAACTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405581.3
CDS-3UTR TCA 90 bp ATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACAGCTCGAGCCAGAGCCTaGAGCATGCATCGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: ILVTGSCALHRQIRYIATARARA*SMHRSK
Trigger: CTTTGACCGATGCATGCTTCAGGCTCTGGCTCGAGC...TGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR TCA 90 bp CCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGCGCTCGAGCCAGAGCCTaGAGCATGCATCGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: PKTQQIPILYKVTIHNYSARARA*SMHRSK
Trigger: CTTTGACCGATGCATGCTTCAGGCTCTGGCTCGAGC...GCTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR TCA 90 bp TCTATGAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTTTGGTTGTGTGTTGGTaGTGCATTTTGGTTTTATCT +
Preference number: 4 (lower is better)
Translates to: SMNQEAKSHWTPTVSALGLVVCW*CILVLS
Trigger: AGATAAAACCAAAATGCATCACCAACACACAACCAA...ACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTCATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR TCA 90 bp GTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACACAGGACATCCTTGGATGCTTGTaGATGCCTCAAGTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: VTGSCALHRQIRYIATQDILGCL*MPQVCL
Trigger: GAGACAGACTTGAGGCATTCACAAGCATCCAAGGAT...GTCCTGTGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR TCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGAATCCTTGGATGCTTGTaGATGCCTCAAGTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGILGCL*MPQVCL
Trigger: GAGACAGACTTGAGGCATTCACAAGCATCCAAGGAT...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR TCA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAAACAGGAAGCCAGCAGTaGGCCAGTATCCTTGGATGC +
Preference number: 4 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKTGSQQ*ASILGC
Trigger: GCATCCAAGGATACTGGCTCACTGCTGGCTTCCTGT...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAACAGGAAGCCAGCAGTaGGCCAGTATCCTTGGATGC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKTGSQQ*ASILGC
Trigger: GCATCCAAGGATACTGGCTCACTGCTGGCTTCCTGT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATGGTCCTGGACACCGTaGCGAAGAAATAAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKWSWTP*RRNKGP
Trigger: GGGACCCTTATTTCTTCGTCACGGTGTCCAGGACCA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAATGGTCCTGGACACCGTaGCGAAGAAATAAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKWSWTP*RRNKGP
Trigger: GGGACCCTTATTTCTTCGTCACGGTGTCCAGGACCA...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACCAATGCCTGAGTGCTaGCGCAGATTCCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKPMPEC*RRFLVT
Trigger: AGTCACCAGGAATCTGCGTCAGCACTCAGGCATTGG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR TCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTGCAACCAATTTTTCCTaGAACATCAACTTGCAATGT +
Preference number: 4 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLATNFS*NINLQC
Trigger: ACATTGCAAGTTGATGTTTCAGGAAAAATTGGTTGC...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp CTGCTGGGTTGTTTCTCCTTTACAACAGCCCCATTGGACTGTGCTGAGTTACTGCTGATATGTTTGGTATaGAGATACTTGGGATTCAAG +
Preference number: 4 (lower is better)
Translates to: LLGCFSFTTAPLDCAELLLICLV*RYLGFK
Trigger: CTTGAATCCCAAGTATCTTCATACCAAACATATCAG...CAGTAACTCAGCACAGTCCAATGGGGCTGTTGTAAAGGAGAAACAACCCAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635519.1
CDS-3UTR TCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTCTGATATGTTTGGTATaGAGATACTTGGGATTCAAG +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGLICLV*RYLGFK
Trigger: CTTGAATCCCAAGTATCTTCATACCAAACATATCAG...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp CACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCGACTTGAGAGGAGGATaGAGAAGGTTATCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: HFVPVSQHFHSVIHSNLPDLRGG*RRLSKG
Trigger: GCCTTTTGATAACCTTCTTCATCCTCCTCTCAAGTC...GGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR TCA 90 bp ACATGTCTCCAGCTGACTTCGCCATTTTTGTCATGTACACATGATAAGGGATTTGGACACATCACAAAGTaGGACCAGTGCTTACCTCGA +
Preference number: 4 (lower is better)
Translates to: TCLQLTSPFLSCTHDKGFGHITK*DQCLPR
Trigger: TCGAGGTAAGCACTGGTCTCACTTTGTGATGTGTCC...AAATCCCTTATCATGTGTACATGACAAAAATGGCGAAGTCAGCTGGAGACATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR TCA 90 bp GCACAGAAGGATCAACATCAACTCTGTAAGGACACATCACAAAGTGAGACCAGTTTTAAAATGGACAGTTaGAACCACCGCCCCCAAACA +
Preference number: 4 (lower is better)
Translates to: AQKDQHQLCKDTSQSETSFKMDS*NHRPQT
Trigger: TGTTTGGGGGCGGTGGTTTCAACTGTCCATTTTAAA...ACTGGTCTCACTTTGTGATGTGTCCTTACAGAGTTGATGTTGATCCTTCTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR TCA 90 bp ACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGGTAACAGCTCTTCTAGTAACATaGGAAGCCTGGATAATTAAA +
Preference number: 4 (lower is better)
Translates to: TVCGCELRGSSIARVEVTALLVT*EAWIIK
Trigger: TTTAATTATCCAGGCTTCTCATGTTACTAGAAGAGC...TGTTACCTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp ATTTGCAGCCATATAATTTGCAAGCATTTGCCCATCCTTTGCAGTGATGGTTTGGCCCATCCTTTGCAGTaGTGGTTTGAAAGCAGCTAC +
Preference number: 4 (lower is better)
Translates to: ICSHIICKHLPILCSDGLAHPLQ*WFESSY
Trigger: GTAGCTGCTTTCAAACCATCACTGCAAAGGATGGGC...CAAACCATCACTGCAAAGGATGGGCAAATGCTTGCAAATTATATGGCTGCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496792.3
CDS-3UTR TCA 90 bp TTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAAAAGAGTACACATGCCTaGCTTACCAAGCAATGCGGG +
Preference number: 4 (lower is better)
Translates to: FVPVSQHFHSVIHSNLPKKSTHA*LTKQCG
Trigger: CCCGCATTGCTTGGTAAGTCAGGCATGTGTACTCTT...TTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS-3UTR GCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCACAGCTGAGAAGAAGATaGAGACGAAGGAGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAQLRRR*RRRSKG
Trigger: TCCCTTACTCCTTCGTCTGCATCTTCTTCTCAGCTG...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342183.9
ENST00000401710.5
CDS-3UTR GCA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAATATGGCCAGTCTGTCTaGTCGTGTACTGGGTCGGTC +
Preference number: 4 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKYGQSV*SCTGSV
Trigger: GACCGACCCAGTACACGAGCAGACAGACTGGCCATA...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATATGGCCAGTCTGTCTaGTCGTGTACTGGGTCGGTC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKYGQSV*SCTGSV
Trigger: GACCGACCCAGTACACGAGCAGACAGACTGGCCATA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000637906.1
CDS-3UTR GCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTCCCATCATTAATGATTaGATTGGATTCTTCAATGGC +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGPIIND*IGFFNG
Trigger: GCCATTGAAGAATCCAATGCAATCATTAATGATGGG...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp CTGCTGGGTTGTTTCTCCTTTACAACAGCCCCATTGGACTGTGCTGAGTTACTGCCCATCATTAATGATTaGATTGGATTCTTCAATGGC +
Preference number: 4 (lower is better)
Translates to: LLGCFSFTTAPLDCAELLPIIND*IGFFNG
Trigger: GCCATTGAAGAATCCAATGCAATCATTAATGATGGG...CAGTAACTCAGCACAGTCCAATGGGGCTGTTGTAAAGGAGAAACAACCCAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR GCA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCGCCAATTATTATGGTTaGTTGGCTATTGAAGATTGT +
Preference number: 4 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLANYYG*LAIEDC
Trigger: ACAATCTTCAATAGCCAAGCAACCATAATAATTGGC...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTGGCATCGTTTTCGGCTaGCATATTCAGAACTTTCAA +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSGIVFG*HIQNFQ
Trigger: TTGAAAGTTCTGAATATGGCAGCCGAAAACGATGCC...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCCCTTTGCTTTATGAATaGGTGCGGTCATCACTGTCT +
Preference number: 4 (lower is better)
Translates to: SMKQITPFVINTLAQPSSPLLYE*VRSSLS
Trigger: AGACAGTGATGACCGCACGCATTCATAAAGCAAAGG...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTTTGGTTTTTGTGTTGTaGCTTGATGCTGTAGTACTC +
Preference number: 4 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTLVFVL*LDAVVL
Trigger: GAGTACTACAGCATCAAGGCACAACACAAAAACCAA...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCAGCAAGTTCCAACCACTaGTCCAGTTGCACCAGGCGG +
Preference number: 4 (lower is better)
Translates to: CRLTNFASITCPHNGSYSASSNH*SSCTRR
Trigger: CCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGC...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp AATGACTGCAGGTCAAGGATTCCAATAAGGAAACAGAAGGTTGCAGATGTTAGACGGCTGTGCTGGGACTaGCTCCAACATAGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: NDCRSRIPIRKQKVADVRRLCWD*LQHRKS
Trigger: ACTTTTTCTATGTTGGAGGCAGTCCCAGCACAGCCG...TCTAACATCTGCAACCTTCTGTTTCCTTATTGGAATCCTTGACCTGCAGTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR GCA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCACTGGAAGGTCGGCTGTaGTGGGACTGCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: CRLTNFASITCPHNGSYSLEGRL*WDCLQH
Trigger: ATGTTGGAGGCAGTCCCAGCACAGCCGACCTTCCAG...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp CTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTCTGGAAGGTCGGCTGTaGTGGGACTGCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: LSPKPNKFQSYTKLQYTTLEGRL*WDCLQH
Trigger: ATGTTGGAGGCAGTCCCAGCACAGCCGACCTTCCAG...AGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000625891.2
ENST00000628515.2
CDS-3UTR GCA 90 bp AACTACTTTGATCTCTATTTGAATTCCCGGCCATTCAAAGTTCCTTGTCATTTTCTGGAAGGTCGGCTGTaGTGGGACTGCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: NYFDLYLNSRPFKVPCHFLEGRL*WDCLQH
Trigger: ATGTTGGAGGCAGTCCCAGCACAGCCGACCTTCCAG...AAAATGACAAGGAACTTTGAATGGCCGGGAATTCAAATAGAGATCAAAGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626249.2
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACTCTCTCACAGGACCTaGCAAGATAGCCTGTTCCGG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKLSHRT*QDSLFR
Trigger: CCGGAACAGGCTATCTTGGCAGGTCCTGTGAGAGAG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAATAGCTCAAAACCGTTaGCTCTCTCTCACAGGACCT +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLIAQNR*LSLTGP
Trigger: AGGTCCTGTGAGAGAGAGGCAACGGTTTTGAGCTAT...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCATAGCTCAAAACCGTTaGCTCTCTCTCACAGGACCT +
Preference number: 4 (lower is better)
Translates to: LQQPELRCRLTNFASITCIAQNR*LSLTGP
Trigger: AGGTCCTGTGAGAGAGAGGCAACGGTTTTGAGCTAT...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGTGGTTGCCATCAGAATaGCATATGCACGCTGGGATC +
Preference number: 4 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTEWLPSE*HMHAGI
Trigger: GATCCCAGCGTGCATATGGCATTCTGATGGCAACCA...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACCTAGTATGATCACCTaGCATTTGACCTGTCATGGC +
Preference number: 4 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGPSMIT*HLTCHG
Trigger: GCCATGACAGGTCAAATGGCAGGTGATCATACTAGG...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACAAAAGCATTCTGGAAGGTGACAGGATCTaGTATGATGTTCCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: KGHLCSFKHSSCLHKSILEGDRI*YDVPEA
Trigger: GGCTTCAGGAACATCATAGCAGATCCTGTCACCTTC...CAGAATGCTTTTGTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR GCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGAGAAGGTGACAGGATCTaGTATGATGTTCCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGEGDRI*YDVPEA
Trigger: GGCTTCAGGAACATCATAGCAGATCCTGTCACCTTC...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCGCTCCGGCGGTGATTTaGGTTGTGATTTTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: LQQPELRCRLTNFASITCAPAVI*VVIFVS
Trigger: TGACACAAAAATCACAACGCAAATCACCGCCGGAGC...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGATCAAGATGATAAATTaGCTGCGCATCAGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMIKMIN*LRISPA
Trigger: GGCCGGGCTGATGCGCAGGCAATTTATCATCTTGAT...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378262.7
ENST00000412315.5
CDS-3UTR GCA 90 bp TTCAGAATAAACCAAGTACATCACTGCTTACCAACAGCACCTATGGCTAACAGTTTTTCTCTCTGCCTCTaGAGGGCCAAGCTAAGATGC +
Preference number: 4 (lower is better)
Translates to: FRINQVHHCLPTAPMANSFSLCL*RAKLRC
Trigger: GCATCTTAGCTTGGCCCTGCAGAGGCAGAGAGAAAA...ACTGTTAGCCATAGGTGCTGTTGGTAAGCAGTGATGTACTTGGTTTATTCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGGGCTTCAGCACCGCTaGAGCCAAAGCCTAATTCCT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKGLQHR*SQSLIP
Trigger: AGGAATTAGGCTTTGGCTGCAGCGGTGCTGAAGCCC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
CDS-3UTR GCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCATAGCTTCAAAGGCCTaGTTCTTCTGTCATAGCATG +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFIASKA*FFCHSM
Trigger: CATGCTATGACAGAAGAAGCAGGCCTTTGAAGCTAT...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR GCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTATAGCTTCAAAGGCCTaGTTCTTCTGTCATAGCATG +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSIASKA*FFCHSM
Trigger: CATGCTATGACAGAAGAAGCAGGCCTTTGAAGCTAT...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR GCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAGGAGAAAGGGATGCTTaGCTCTTTAGGGCACCATTT +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAGERDA*LFRAPF
Trigger: AAATGGTGCCCTAAAGAGGCAAGCATCCCTTTCTCC...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR GCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGAAGACCAAAGGGAGGATaGACTTTGGAGACAACGTTC +
Preference number: 4 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGRPKGG*TLETTF
Trigger: GAACGTTGTCTCCAAAGTGCATCCTCCCTTTGGTCT...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR GCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAAGACCAAAGGGAGGATaGACTTTGGAGACAACGTTC +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLARPKGG*TLETTF
Trigger: GAACGTTGTCTCCAAAGTGCATCCTCCCTTTGGTCT...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR GCA 90 bp CAACAGATGGCACAAGGTGGGGATATTCACATAAGACAGACTTGGATTGATGTTGGAGTGAGAGGGATGTaGCCTCCTTTATCTAGTTCT +
Preference number: 4 (lower is better)
Translates to: QQMAQGGDIHIRQTWIDVGVRGM*PPLSSS
Trigger: AGAACTAGATAAAGGAGGGCACATCCCTCTCACTCC...AACATCAATCCAAGTCTGTCTTATGTGAATATCCCCACCTTGTGCCATCTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATGTTGTCTTCTTGGCTaGAGTCCTTGCCGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKCCLLG*SPCRGS
Trigger: GCTTCCGCGGCAAGGACTGCAGCCAAGAAGACAACA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCTTTAAAATGGACAGTTGAAACCACCGCCCCCAAACAAATACATTTAAGTCATTGTTGTCTTCTTGGCTaGAGTCCTTGCCGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: SLKWTVETTAPKQIHLSHCCLLG*SPCRGS
Trigger: GCTTCCGCGGCAAGGACTGCAGCCAAGAAGACAACA...ATGACTTAAATGTATTTGTTTGGGGGCGGTGGTTTCAACTGTCCATTTTAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATCGCCCATCATCAGGTaGGCCAGACCTTCCACATTG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKSPIIR*ARPSTL
Trigger: CAATGTGGAAGGTCTGGCGCACCTGATGATGGGCGA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCTTTAAAATGGACAGTTGAAACCACCGCCCCCAAACAAATACATTTAAGTCATTCGCCCATCATCAGGTaGGCCAGACCTTCCACATTG +
Preference number: 4 (lower is better)
Translates to: SLKWTVETTAPKQIHLSHSPIIR*ARPSTL
Trigger: CAATGTGGAAGGTCTGGCGCACCTGATGATGGGCGA...ATGACTTAAATGTATTTGTTTGGGGGCGGTGGTTTCAACTGTCCATTTTAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp TCTGAATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTTTACGTGACGCCGGGTaGTGTCCTTCTGAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: SEFLLHFVPVSQHFHSVILRDAG*CPSERE
Trigger: TTCTCTTTCAGAAGGACAGCACCCGGCGTCACGTAA...AATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS-3UTR GCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCGTCTATCTCCAGGAGTaGGGGAGGGGAGAACAGGCA +
Preference number: 4 (lower is better)
Translates to: CNNIISVHENFPMIASMPVYLQE*GRGEQA
Trigger: TGCCTGTTCTCCCCTCCCGCACTCCTGGAGATAGAC...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404971.5
ENST00000406316.6
CDS-3UTR GCA 90 bp CCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGGTCTATCTCCAGGAGTaGGGGAGGGGAGAACAGGCA +
Preference number: 4 (lower is better)
Translates to: PQNPTNSNLIQSYNTQLQVYLQE*GRGEQA
Trigger: TGCCTGTTCTCCCCTCCCGCACTCCTGGAGATAGAC...CTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR GCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTTGCTTCCATAACCTaGCCACATAATGGTTCTTAT +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGFASIT*PHNGSY
Trigger: ATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAA...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp ATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACAGGTCTTCCCACGGTCTaGGGCTGTGAGTTAAGGGGA +
Preference number: 4 (lower is better)
Translates to: ILVTGSCALHRQIRYIATGLPTV*GCELRG
Trigger: TCCCCTTAACTCACAGCCGCAGACCGTGGGAAGACC...TGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp TTAGATATTACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGTCTTAACGGTCTTCCCACGGTCTaGGGCTGTGAGTTAAGGGGA +
Preference number: 4 (lower is better)
Translates to: LDITHQLVQVEELYPGLNGLPTV*GCELRG
Trigger: TCCCCTTAACTCACAGCCGCAGACCGTGGGAAGACC...GTTAAGACCTGGATACAACTCTTCCACCTGAACTAATTGATGAGTAATATCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp GAAGAGGAACCTAATTCCTTCATAATGATCTATGAGCTGTTTCCCTCCCCCAATGGTCTTCAGCAAAGGTaGTTTCATGCTGGATTGGTG +
Preference number: 4 (lower is better)
Translates to: EEEPNSFIMIYELFPSPNGLQQR*FHAGLV
Trigger: CACCAATCCAGCATGAAAGCACCTTTGCTGAAGACC...ATTGGGGGAGGGAAACAGCTCATAGATCATTATGAAGGAATTAGGTTCCTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625891.2
CDS-3UTR CCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCCTGCTGCCATGGAAATaGTGGATGTGGTGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: CNNIISVHENFPMIASMPLLPWK*WMWCAP
Trigger: GGGAGCGCACCACATCCACCATTTCCATGGCAGCAG...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342183.9
CDS-3UTR CCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTCATTGGATTCTTCAATaGCGATGTCATCTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCHWILQ*RCHLSQ
Trigger: TTGGGACAGATGACATCGCCATTGAAGAATCCAATG...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCACATTGGATTCTTCAATaGCGATGTCATCTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSHWILQ*RCHLSQ
Trigger: TTGGGACAGATGACATCGCCATTGAAGAATCCAATG...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTATTATTATGGTTGCTTaGCTATTGAAGATTGTGAGC +
Preference number: 4 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVIIMVA*LLKIVS
Trigger: GCTCACAATCTTCAATAGCCAAGCAACCATAATAAT...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATTCACATTTCCCACTATaGCGATGTTGGCATCGTTTT +
Preference number: 4 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHSHFPL*RCWHRF
Trigger: AAAACGATGCCAACATCGCCATAGTGGGAAATGTGA...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
ENST00000637906.1
CDS-3UTR CCA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCCTGATTGCATGGCAGTaGCTGTTGACTCAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: LQQPELRCRLTNFASITCLIAWQ*LLTQLS
Trigger: TGACAACTGAGTCAACAGCCACTGCCATGCAATCAG...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTATGTCATCTGTGGTCTaGCTAATGGGTTCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSMSSVV*LMGSFV
Trigger: GACAAAAGAACCCATTAGCCAGACCACAGATGACAT...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACGACTCTCGTCCACATaGTATGAGCCTTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKRLSST*YEPSSR
Trigger: CCGGGATGAAGGCTCATACCATGTGGACGAGAGTCG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000412315.5
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000630656.1
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
CDS-3UTR CCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTAGCTTTTCGCACTGCTaGGTTGTTTCTCCTTTACAA +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSSFSHC*VVSPLQ
Trigger: TTGTAAAGGAGAAACAACCCAGCAGTGCGAAAAGCT...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCAGCTTTTCGCACTGCTaGGTTGTTTCTCCTTTACAA +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFSFSHC*VVSPLQ
Trigger: TTGTAAAGGAGAAACAACCCAGCAGTGCGAAAAGCT...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCAAGCTTTTCGCACTGCTaGGTTGTTTCTCCTTTACAA +
Preference number: 4 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSSFSHC*VVSPLQ
Trigger: TTGTAAAGGAGAAACAACCCAGCAGTGCGAAAAGCT...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp TTTTTCCCTGGTGCTGAAGCCTCAGATGCATTGAGAGCCAGTGTACTTTGTCTTAGCTTTTCGCACTGCTaGGTTGTTTCTCCTTTACAA +
Preference number: 4 (lower is better)
Translates to: FFPGAEASDALRASVLCLSFSHC*VVSPLQ
Trigger: TTGTAAAGGAGAAACAACCCAGCAGTGCGAAAAGCT...AAGACAAAGTACACTGGCTCTCAATGCATCTGAGGCTTCAGCACCAGGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGAAGGTCGGCTGTGCTaGGACTGCCTCCAACATAGA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKEGRLC*DCLQHR
Trigger: TCTATGTTGGAGGCAGTCCCAGCACAGCCGACCTTC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTCACCTTTATCATCTGTaGGTGCTTGGCATCTTTCTG +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTHLYHL*VLGIFL
Trigger: CAGAAAGATGCCAAGCACCCACAGATGATAAAGGTG...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCACGGATATCTTTGCTTTaGCCATCGATGAACAAATCC +
Preference number: 4 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSRISLL*PSMNKS
Trigger: GGATTTGTTCATCGATGGCCAAAGCAAAGATATCCG...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCGGATATCTTTGCTTTaGCCATCGATGAACAAATCC +
Preference number: 4 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHRISLL*PSMNKS
Trigger: GGATTTGTTCATCGATGGCCAAAGCAAAGATATCCG...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGCCATTTGACCTGTCATaGCCTGTTGGTCATCCACTG +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMPFDLS*PVGHPL
Trigger: CAGTGGATGACCAACAGGCCATGACAGGTCAAATGG...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp AAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACAAAAGCATTCTGCAGTGTGGAGGTTGCTaGTGTCCCTTGATATCATCA +
Preference number: 4 (lower is better)
Translates to: KGHLCSFKHSSCLHKSILQCGGC*CPLISS
Trigger: TGATGATATCAAGGGACACCAGCAACCTCCACACTG...CAGAATGCTTTTGTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCACAGTGTGGAGGTTGCTaGTGTCCCTTGATATCATCA +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAQCGGC*CPLISS
Trigger: TGATGATATCAAGGGACACCAGCAACCTCCACACTG...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAACAGTGTGGAGGTTGCTaGTGTCCCTTGATATCATCA +
Preference number: 4 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEQCGGC*CPLISS
Trigger: TGATGATATCAAGGGACACCAGCAACCTCCACACTG...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTTCAATCTTTACAGTGTaGAGGTTGCTGGTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTSIFTV*RLLVSL
Trigger: AAGGGACACCAGCAACCTCCACACTGTAAAGATTGA...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACTTGGCAGGTTGTGCTaGGCCCTTCACATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKLGRLC*ALHILS
Trigger: AGAGAGGATGTGAAGGGCCCAGCACAACCTGCCAAG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGAACATGAGTCCTCTTaGCAGGTTGTGCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKEHESS*QVVLGP
Trigger: AGGGCCCAGCACAACCTGCCAAGAGGACTCATGTTC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp AAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACAAAAGCATTCTGAGCACACACCTTGATTaGAACATGAGTCCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: KGHLCSFKHSSCLHKSILSTHLD*NMSPLG
Trigger: GCCAAGAGGACTCATGTTCCAATCAAGGTGTGTGCT...CAGAATGCTTTTGTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CCA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCAGCACACACCTTGATTaGAACATGAGTCCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: LQQPELRCRLTNFASITCSTHLD*NMSPLG
Trigger: GCCAAGAGGACTCATGTTCCAATCAAGGTGTGTGCT...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAAGCACACACCTTGATTaGAACATGAGTCCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLSTHLD*NMSPLG
Trigger: GCCAAGAGGACTCATGTTCCAATCAAGGTGTGTGCT...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATATCCATGTCTGTCTaGCTACCCTGCGTGCTTAGA +
Preference number: 4 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEISMSV*LPCVLR
Trigger: TCTAAGCACGCAGGGTAGCCAGACAGACATGGATAT...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378262.7
ENST00000412315.5
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTCAAGGATGTCATCTGTaGTCTGCAAGTTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCQGCHL*SASFHS
Trigger: ACTGTGAAAACTTGCAGACCACAGATGACATCCTTG...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412315.5
ENST00000635519.1
CDS-3UTR CCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCTGCCAGCACATCAATTaGTTGTGTGTTGGTGATGCA +
Preference number: 4 (lower is better)
Translates to: SMKQITPFVINTLAQPSSCQHIN*LCVGDA
Trigger: TGCATCACCAACACACAACCAATTGATGTGCTGGCA...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp GCACAGAAGGATCAACATCAACTCTGTAAGGACACATCACAAAGTGAGACCAGTTGCCAGCACATCAATTaGTTGTGTGTTGGTGATGCA +
Preference number: 4 (lower is better)
Translates to: AQKDQHQLCKDTSQSETSCQHIN*LCVGDA
Trigger: TGCATCACCAACACACAACCAATTGATGTGCTGGCA...ACTGGTCTCACTTTGTGATGTGTCCTTACAGAGTTGATGTTGATCCTTCTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405581.3
CDS-3UTR CCA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTCGTGGTCTCACAAGTTaGATTTTACTTCTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLRGLTS*ILLLFS
Trigger: TGAAAAGAGAAGTAAAATCCAACTTGTGAGACCACG...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCATGTCTCCTTCAGATGTaGTGTCTTACAGCAGAACGG +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLACLLQM*CLTAER
Trigger: CCGTTCTGCTGTAAGACACCACATCTGAAGGAGACA...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGATGTCTCCTTCAGATGTaGTGTCTTACAGCAGAACGG +
Preference number: 4 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGCLLQM*CLTAER
Trigger: CCGTTCTGCTGTAAGACACCACATCTGAAGGAGACA...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGCCAGGTTCCACCAGTaGTACCAGGCCAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKARFHQ*YQAKRK
Trigger: CTTCCTTTTGGCCTGGTACCACTGGTGGAACCTGGC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
CDS-3UTR CCA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAAGCCAGGTTCCACCAGTaGTACCAGGCCAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKARFHQ*YQAKRK
Trigger: CTTCCTTTTGGCCTGGTACCACTGGTGGAACCTGGC...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp TCTTTAAAATGGACAGTTGAAACCACCGCCCCCAAACAAATACATTTAAGTCATGCCAGGTTCCACCAGTaGTACCAGGCCAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: SLKWTVETTAPKQIHLSHARFHQ*YQAKRK
Trigger: CTTCCTTTTGGCCTGGTACCACTGGTGGAACCTGGC...ATGACTTAAATGTATTTGTTTGGGGGCGGTGGTTTCAACTGTCCATTTTAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR CCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTTTGGAGACAACGTTCTaGAAAAGGCTTCAACAAAAG +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGLETTF*KRLQQK
Trigger: CTTTTGTTGAAGCCTTTTCCAGAACGTTGTCTCCAA...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACTGCGAGTCTTGAGCTaGAAGCTCATCTCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKLRVLS*KLISLS
Trigger: CGAGAGCGAGATGAGCTTCCAGCTCAAGACTCGCAG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACCCAGTTTATGGTCTGCGAGTCTTGAGCTaGAAGCTCATCTCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: SRRLRNKFLLLTSYPVYGLRVLS*KLISLS
Trigger: CGAGAGCGAGATGAGCTTCCAGCTCAAGACTCGCAG...ACCATAAACTGGGTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CCA 90 bp CCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGCACTTGGCCTCCACCTaGTCGATGAAGAGCGTGGTG +
Preference number: 4 (lower is better)
Translates to: PQNPTNSNLIQSYNTQLQHLAST*SMKSVV
Trigger: CACCACGCTCTTCATCGACCAGGTGGAGGCCAAGTG...CTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAACCTTTACTTTTACCTTaGTCGCCCATCATCAGGTGC +
Preference number: 4 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEPLLLP*SPIIRC
Trigger: GCACCTGATGATGGGCGACCAAGGTAAAAGTAAAGG...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCACCTTTACTTTTACCTTaGTCGCCCATCATCAGGTGC +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAPLLLP*SPIIRC
Trigger: GCACCTGATGATGGGCGACCAAGGTAAAAGTAAAGG...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp CTGAATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCCCTTTACTTTTACCTTaGTCGCCCATCATCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LNSYFTLYQSHSTSILSFPLLLP*SPIIRC
Trigger: GCACCTGATGATGGGCGACCAAGGTAAAAGTAAAGG...GAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS-3UTR CCA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAATAGTGAATGTATGTaGGAATGTGAGTATTTCAGG +
Preference number: 4 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCNSECM*ECEYFR
Trigger: CCTGAAATACTCACATTCCCACATACATTCACTATT...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAACCCTTCTTATTTAACTaGCTTTCCCTGAGTAAGACT +
Preference number: 4 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKPFLFN*LSLSKT
Trigger: AGTCTTACTCAGGGAAAGCCAGTTAAATAAGAAGGG...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCCCTTCTTATTTAACTaGCTTTCCCTGAGTAAGACT +
Preference number: 4 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTPFLFN*LSLSKT
Trigger: AGTCTTACTCAGGGAAAGCCAGTTAAATAAGAAGGG...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp TCTATGAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTTATATGAACACTCTGTaGATGCCATGTCATAGTCAT +
Preference number: 4 (lower is better)
Translates to: SMNQEAKSHWTPTVSALGYMNTL*MPCHSH
Trigger: ATGACTATGACATGGCATCCACAGAGTGTTCATATA...ACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTCATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR CCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTTTTGGTAAGATACGGTaGTCTCTAGAAGTTTTCCAC +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGFGKIR*SLEVFH
Trigger: GTGGAAAACTTCTAGAGACCACCGTATCTTACCAAA...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635519.1
CDS-3UTR CCA 90 bp TGCACCCACAGCAGTACCATTTCAGTGGTGCACATGCTTAGACTTATGTCTCAAGCAGTACCATTTCAGTaGTGCACATGCTTAGACTTA +
Preference number: 4 (lower is better)
Translates to: CTHSSTISVVHMLRLMSQAVPFQ*CTCLDL
Trigger: TAAGTCTAAGCATGTGCACCACTGAAATGGTACTGC...TTGAGACATAAGTCTAAGCATGTGCACCACTGAAATGGTACTGCTGTGGGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGCAATAGGCACTGAATaGTGCTTGCTGCTGCCATGG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKAIGTE*CLLLPW
Trigger: CCATGGCAGCAGCAAGCATCATTCAGTGCCTATTGC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000611589.4
ENST00000628364.2
ENST00000637906.1
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATCGCAAGGATGCCGGTaGCCTGTAGATTGCAATAGG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKSQGCR*PVDCNR
Trigger: CCTATTGCAATCTACAGGTCACCGGCATCCTTGCGA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000611589.4
ENST00000628364.2
ENST00000637906.1
CDS-3UTR TCA 90 bp ATATTATACTTCAAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACGAGGCCACTTATACGTaGTTTGTCCACCACCTTTGC +
Preference number: 4 (lower is better)
Translates to: ILYFKGHLCSFKHSSCLHEATYT*FVHHLC
Trigger: GCAAAGGTGGTGGACAAATCACGTATAAGTGGCCTC...GTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTTGAAGTATAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR TCA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATAATACGGCTTCTTTCTaGACAGTGCTAAAACCTATG +
Preference number: 4 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHNTASF*TVLKPM
Trigger: CATAGGTTTTAGCACTGTTCAGAAAGAAGCCGTATT...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
ENST00000637906.1
CDS-3UTR TCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTAATACGGCTTCTTTCTaGACAGTGCTAAAACCTATG +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCNTASF*TVLKPM
Trigger: CATAGGTTTTAGCACTGTTCAGAAAGAAGCCGTATT...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TTTTTCCCTGGTGCTGAAGCCTCAGATGCATTGAGAGCCAGTGTACTTTGTCTTAATACGGCTTCTTTCTaGACAGTGCTAAAACCTATG +
Preference number: 4 (lower is better)
Translates to: FFPGAEASDALRASVLCLNTASF*TVLKPM
Trigger: CATAGGTTTTAGCACTGTTCAGAAAGAAGCCGTATT...AAGACAAAGTACACTGGCTCTCAATGCATCTGAGGCTTCAGCACCAGGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR TCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGTGCCACCACTCCTCGTaGAACGAACTACATGGTATT +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMCHHSS*NELHGI
Trigger: AATACCATGTAGTTCGTTTCACGAGGAGTGGTGGCA...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
ENST00000637906.1
CDS-3UTR TCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGTGCCACCACTCCTCGTaGAACGAACTACATGGTATT +
Preference number: 4 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTECHHSS*NELHGI
Trigger: AATACCATGTAGTTCGTTTCACGAGGAGTGGTGGCA...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACTCGTCCACATGGTATaGGCCTTCATCCCGGTTTCT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKLVHMV*AFIPVS
Trigger: AGAAACCGGGATGAAGGCTCATACCATGTGGACGAG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000412315.5
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000630656.1
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
CDS-3UTR TCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGAACTGTGCTGAGTTACTaGTGTAGTTTCGACTCTCGT +
Preference number: 4 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGTVLSY*CSFDSR
Trigger: ACGAGAGTCGAAACTACATCAGTAACTCAGCACAGT...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTATACTCCTTTGCTTTATaGATGCGTGCGGTCATCACT +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLYSFAL*MRAVIT
Trigger: AGTGATGACCGCACGCATTCATAAAGCAAAGGAGTA...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
CDS-3UTR TCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAACATAATAAGCGTGCATaGAAATTTCCCAATGATTGC +
Preference number: 4 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKHNKRA*KFPNDC
Trigger: GCAATCATTGGGAAATTTTCATGCACGCTTATTATG...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTATCAGTCCATTCCTCTaGAGGGTTTTAAATGACAGA +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCISPFL*RVLNDR
Trigger: TCTGTCATTTAAAACCCTTCAGAGGAATGGACTGAT...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AGGGAAATAAGCATTTCAGAGCATTTCGGGGGCACAAAGAGACCAGGAAATGCAATCAGTCCATTCCTCTaGAGGGTTTTAAATGACAGA +
Preference number: 4 (lower is better)
Translates to: REISISEHFGGTKRPGNAISPFL*RVLNDR
Trigger: TCTGTCATTTAAAACCCTTCAGAGGAATGGACTGAT...TGCATTTCCTGGTCTCTTTGTGCCCCCGAAATGCTCTGAAATGCTTATTTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626249.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGCCGATTTCCCAGTGTaGAGCATCAGTCCATTCCTC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKADFPV*SISPFL
Trigger: GAGGAATGGACTGATGCTTCACACTGGGAAATCGGC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCTTTTCAGGGCAAGATTaGCATAATCAGCCGATTTCC +
Preference number: 4 (lower is better)
Translates to: SMKQITPFVINTLAQPSSFSGQD*HNQPIS
Trigger: GGAAATCGGCTGATTATGTCAATCTTGCCCTGAAAA...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp CTTTCTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACGTTGTTACTGACTGGTaGCCCTGGAAGGTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: LSLPKTQQIPILYKVTIHVVTDW*PWKVGC
Trigger: ACAGCCGACCTTCCAGGGTCACCAGTCAGTAACAAC...GTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR TCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCACTGGGGTTTCAAAGGTaGTTGGGTCTAAAGTTGCAA +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLALGFQR*LGLKLQ
Trigger: TTGCAACTTTAGACCCAATCACCTTTGAAACCCCAG...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCTGCTTGGCATCTTTCTaGTGTCTTGGCTTGCCATGG +
Preference number: 4 (lower is better)
Translates to: SFQLQQPELRCRLTNFASCLASF*CLGLPW
Trigger: CCATGGCAAGCCAAGACATCAGAAAGATGCCAAGCA...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGACAGAAATGGTACCTaGCCGTCCGTCTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKDRNGT*PSVSLE
Trigger: TTCCAGAGAGACGGACGGTCAGGTACCATTTCTGTC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTATGACTACGGGGAGCTaGATTTTCATAAACATGCTC +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTMTTGS*IFINML
Trigger: GAGCATGTTTATGAAAATTCAGCTCCCCGTAGTCAT...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACAGCCTCCGTATGCATaGCTACGGGGAGCTGAATTT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKQPPYA*LRGAEF
Trigger: AAATTCAGCTCCCCGTAGTCATGCATACGGAGGCTG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGCCACTGATTGTCATTaGGAGGTTTATTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTATDCH*EVYLSF
Trigger: GAAGCTCAAATAAACCTCTCAATGACAATCAGTGGC...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGATGCCAGGCAGCCTTaGAAGCCTTCTTTGGCATGT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKDARQP*KPSLAC
Trigger: ACATGCCAAAGAAGGCTTTCAAGGCTGCCTGGCATC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAAGATGCCAGGCAGCCTTaGAAGCCTTCTTTGGCATGT +
Preference number: 4 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKDARQP*KPSLAC
Trigger: ACATGCCAAAGAAGGCTTTCAAGGCTGCCTGGCATC...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCAAAAGAGCATCGGAGATaGGGTCCGGAAGCCGTCCAT +
Preference number: 4 (lower is better)
Translates to: SYYVTELDFESNIILQRPKEHRR*GPEAVH
Trigger: ATGGACGGCTTCCGGACCTCATCTCCGATGCTCTTT...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR TCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTATCAAAGCGAATTTCCTaGGGTCTATGGATAAGGCGA +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLSKRIS*GLWIRR
Trigger: TCGCCTTATCCATAGACCTCAGGAAATTCGCTTTGA...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR TCA 90 bp CAACAGATGGCACAAGGTGGGGATATTCACATAAGACAGACTTGGATTGATGTTTCAAAGCGAATTTCCTaGGGTCTATGGATAAGGCGA +
Preference number: 4 (lower is better)
Translates to: QQMAQGGDIHIRQTWIDVSKRIS*GLWIRR
Trigger: TCGCCTTATCCATAGACCTCAGGAAATTCGCTTTGA...AACATCAATCCAAGTCTGTCTTATGTGAATATCCCCACCTTGTGCCATCTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR TCA 90 bp TCTGAATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTATCCTTGGATGCTTGTaGATGCCTCAAGTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SEFLLHFVPVSQHFHSVIILGCL*MPQVCL
Trigger: GAGACAGACTTGAGGCATTCACAAGCATCCAAGGAT...AATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACCAACTGGAAAACGTTaGCCCCAGTGGTACAGGGTA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKPTGKR*PQWYRV
Trigger: TACCCTGTACCACTGGGGTCAACGTTTTCCAGTTGG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
CDS-3UTR TCA 90 bp TCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACCCAGTTTATGGTCCAACTGGAAAACGTTaGCCCCAGTGGTACAGGGTA +
Preference number: 4 (lower is better)
Translates to: SRRLRNKFLLLTSYPVYGPTGKR*PQWYRV
Trigger: TACCCTGTACCACTGGGGTCAACGTTTTCCAGTTGG...ACCATAAACTGGGTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR TCA 90 bp TTAGATATTACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGTCTTAACTGGTCCTGGACACCGTaGCGAAGAAATAAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LDITHQLVQVEELYPGLNWSWTP*RRNKGP
Trigger: GGGACCCTTATTTCTTCGTCACGGTGTCCAGGACCA...GTTAAGACCTGGATACAACTCTTCCACCTGAACTAATTGATGAGTAATATCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR TCA 90 bp CCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGTGGTCCTGGACACCGTaGCGAAGAAATAAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: PQNPTNSNLIQSYNTQLQWSWTP*RRNKGP
Trigger: GGGACCCTTATTTCTTCGTCACGGTGTCCAGGACCA...CTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR TCA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCTTGAAGATTGTGAGCTaGCGCCCTTTGTCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: SFQLQQPELRCRLTNFASLKIVS*RPLSSS
Trigger: GCTACTCGACAAAGGGCGTCAGCTCACAATCTTCAA...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000625672.2
CDS-3UTR TCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTACCGGCAAAACACACTaGAGACCGAATTTTATTTCT +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCTGKTH*RPNFIS
Trigger: AGAAATAAAATTCGGTCTTCAGTGTGTTTTGCCGGT...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404971.5
CDS-3UTR TCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAATCTTCCAGCATATCTaGTGGATTGCTGTGGATTCG +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLIFQHI*WIAVDS
Trigger: CGAATCCACAGCAATCCATCAGATATGCTGGAAGAT...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAGGAGCAAGATCTCAATaGAGCAAATCACCCCATTTG +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAGARSQ*SKSPHL
Trigger: CAAATGGGGTGATTTGCTTCATTGAGATCTTGCTCC...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAAAGAATCCCATCCACTaGTATTGTCACCATAGCGTG +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLKNPIH*YCHHSV
Trigger: CACGCTATGGTGACAATATCAGTGGATGGGATTCTT...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401669.7
ENST00000406316.6
CDS-3UTR TCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAGCAACCAATTTTTCCTaGAACATCAACTTGCAATGT +
Preference number: 4 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKATNFS*NINLQC
Trigger: ACATTGCAAGTTGATGTTTCAGGAAAAATTGGTTGC...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTATTAACTGGCTTTCCCTaGGTAAGACTGAATGAGACG +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLLTGFP*VRLNET
Trigger: CGTCTCATTCAGTCTTACTCAGGGAAAGCCAGTTAA...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTCTGATATGTTTGGTATaGAGATACTTGGGATTCAAG +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGLICLV*RYLGFK
Trigger: CTTGAATCCCAAGTATCTTCATACCAAACATATCAG...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAACTGATATGTTTGGTATaGAGATACTTGGGATTCAAG +
Preference number: 4 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKLICLV*RYLGFK
Trigger: CTTGAATCCCAAGTATCTTCATACCAAACATATCAG...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTAGAAGAAAACCCCTTTaGTACCCAATCACACAAAGC +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTRRKPL*YPITQS
Trigger: GCTTTGTGTGATTGGGTATCAAAGGGGTTTTCTTCT...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000636345.1
CDS-3UTR TCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAGCAACTAATACTGTATaGGTTTATGGTTTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKATNTV*VYGFWH
Trigger: ATGCCAGAAACCATAAACTCATACAGTATTAGTTGC...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GACTTCCCAGCCTCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACTCATTCCAGATCCCCTaGATTCACTACTCACACAAG +
Preference number: 4 (lower is better)
Translates to: DFPASRRLRNKFLLLTSYSFQIP*IHYSHK
Trigger: CTTGTGTGAGTAGTGAATTCAGGGGATCTGGAATGA...GTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGAGGCTGGGAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR TCA 90 bp TCTGAATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTTCGAGAGAAAGGACTTaGGAGGAGGATGAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: SEFLLHFVPVSQHFHSVISRERT*EEDEEG
Trigger: ACCTTCTTCATCCTCCTCTCAAGTCCTTTCTCTCGA...AATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR TCA 90 bp GTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACACAGGACTTTAAAATGGACAGTTaGAACCACCGCCCCCAAACA +
Preference number: 4 (lower is better)
Translates to: VTGSCALHRQIRYIATQDFKMDS*NHRPQT
Trigger: TGTTTGGGGGCGGTGGTTTCAACTGTCCATTTTAAA...GTCCTGTGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp TTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAAAGGGCAGAGCCTTTATaGATGGGATTGCTGTCCTTA +
Preference number: 4 (lower is better)
Translates to: FVPVSQHFHSVIHSNLPKRAEPL*MGLLSL
Trigger: TAAGGACAGCAATCCCATTCATAAAGGCTCTGCCCT...TTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR TCA 90 bp GACTTCCCAGCCTCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACGATTTGATTAGGTCCTaGGGGCAGAGCCTTTATGAA +
Preference number: 4 (lower is better)
Translates to: DFPASRRLRNKFLLLTSYDLIRS*GQSLYE
Trigger: TTCATAAAGGCTCTGCCCTCAGGACCTAATCAAATC...GTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGAGGCTGGGAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp GGTAATATTAGATATTACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGCACGGTCTGCGGCTGTaGGTTAAGGGGATCCAGTAT +
Preference number: 4 (lower is better)
Translates to: GNIRYYSSISSGGRVVSRHGLRL*VKGIQY
Trigger: ATACTGGATCCCCTTAACTCACAGCCGCAGACCGTG...CCTGGATACAACTCTTCCACCTGAACTAATTGATGAGTAATATCTAATATTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp CCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGCTTCATGCTGGATTGGTaGCCCTGGAAGGTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: PKTQQIPILYKVTIHNYSFMLDW*PWKVGC
Trigger: ACAGCCGACCTTCCAGGGTCACCAATCCAGCATGAA...GCTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625891.2
CDS-3UTR TCA 90 bp GAAGAGGAACCTAATTCCTTCATAATGATCTATGAGCTGTTTCCCTCCCCCAATCTTCATAATGATCTATaGGCTGTTTCCCTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: EEEPNSFIMIYELFPSPNLHNDL*AVSLPQ
Trigger: TTGGGGGAGGGAAACAGCTCATAGATCATTATGAAG...ATTGGGGGAGGGAAACAGCTCATAGATCATTATGAAGGAATTAGGTTCCTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000625891.2
ENST00000628515.2
CDS-3UTR TCA 90 bp ATGGCGATGTTGGCATCGTTTTCGGCTGCCATATTCAGAACTTTCAAGCCATTGAAGATCTGGATGCAGTaGAAGACTCAAAGGCTATAT +
Preference number: 4 (lower is better)
Translates to: MAMLASFSAAIFRTFKPLKIWMQ*KTQRLY
Trigger: ATATAGCCTTTGAGTCTTTCACTGCATCCAGATCTT...CAATGGCTTGAAAGTTCTGAATATGGCAGCCGAAAACGATGCCAACATCGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR TCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGAAGCCTCAGATGCATTaGGAGCCAGTGTACTTTGTC +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMKPQMH*EPVYFV
Trigger: GACAAAGTACACTGGCTCTCAATGCATCTGAGGCTT...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR TCA 90 bp ATATGCACCAAACACAGGCATTTCAACAGTAAGGGTCTGTCAACATTCACAAACAAAGGTGCAGAACTGTaGACTGTGGTCCCAATTCAC +
Preference number: 4 (lower is better)
Translates to: ICTKHRHFNSKGLSTFTNKGAEL*TVVPIH
Trigger: GTGAATTGGGACCACAGTTCACAGTTCTGCACCTTT...GTTTGTGAATGTTGACAGACCCTTACTGTTGAAATGCCTGTGTTTGGTGCATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAAATGGTGGATGTGGTaGGCTCCCAAACTGGATGCC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKKWWMW*APKLDA
Trigger: GGCATCCAGTTTGGGAGCGCACCACATCCACCATTT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000611589.4
ENST00000628364.2
ENST00000637906.1
CDS-3UTR GCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCTATGGCCAGTCTGTCTaGTCGTGTACTGGGTCGGTC +
Preference number: 4 (lower is better)
Translates to: CNNIISVHENFPMIASMPYGQSV*SCTGSV
Trigger: GACCGACCCAGTACACGAGCAGACAGACTGGCCATA...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTCCCATCATTAATGATTaGATTGGATTCTTCAATGGC +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGPIIND*IGFFNG
Trigger: GCCATTGAAGAATCCAATGCAATCATTAATGATGGG...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTGCCAATTATTATGGTTaGTTGGCTATTGAAGATTGT +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGANYYG*LAIEDC
Trigger: ACAATCTTCAATAGCCAAGCAACCATAATAATTGGC...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATGGAAGGGCTGGCCCTaGTCTTTCCCGCCAATTATT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKWKGWP*SFPPII
Trigger: AATAATTGGCGGGAAAGAGCAGGGCCAGCCCTTCCA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000637906.1
CDS-3UTR GCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCGGCATCGTTTTCGGCTaGCATATTCAGAACTTTCAA +
Preference number: 4 (lower is better)
Translates to: SMKQITPFVINTLAQPSSGIVFG*HIQNFQ
Trigger: TTGAAAGTTCTGAATATGGCAGCCGAAAACGATGCC...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCACCTTTGCTTTATGAATaGGTGCGGTCATCACTGTCT +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAPLLYE*VRSSLS
Trigger: AGACAGTGATGACCGCACGCATTCATAAAGCAAAGG...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAGCTGTAGTACTCCTTTaGTTTATGAATGCGTGCGGT +
Preference number: 4 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEAVVLL*FMNACG
Trigger: ACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
CDS-3UTR GCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCTTGGTTTTTGTGTTGTaGCTTGATGCTGTAGTACTC +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFLVFVL*LDAVVL
Trigger: GAGTACTACAGCATCAAGGCACAACACAAAAACCAA...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp GTTGGAGCTTTTCGCACTGCTGGGTTGTTTCTCCTTTACAACAGCCCCATTGGAAAACTCTTAAAGGTTTaGAGGTTGAGTCACTCAAAA +
Preference number: 4 (lower is better)
Translates to: VGAFRTAGLFLLYNSPIGKLLKV*RLSHSK
Trigger: TTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT...TCCAATGGGGCTGTTGTAAAGGAGAAACAACCCAGCAGTGCGAAAAGCTCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635519.1
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAACCACTGCTCCAGTTaGACCAGGCGGCAAACTCTT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKNHCSS*TRRQTL
Trigger: AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAAAACCACTGCTCCAGTTaGACCAGGCGGCAAACTCTT +
Preference number: 4 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKNHCSS*TRRQTL
Trigger: AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTT...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCATCTTAGGATCTCCTTaGTTGGCAAGTCGAGATAAT +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFILGSP*LASRDN
Trigger: ATTATCTCGACTTGCCAAGCAAGGAGATCCTAAGAT...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAATTCTCACATTTAAATaGCACCACTCCATGGATCTT +
Preference number: 4 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKILTFK*HHSMDL
Trigger: AAGATCCATGGAGTGGTGGCATTTAAATGTGAGAAT...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCACTCTCTCACAGGACCTaGCAAGATAGCCTGTTCCGG +
Preference number: 4 (lower is better)
Translates to: SYYVTELDFESNIILQRPLSHRT*QDSLFR
Trigger: CCGGAACAGGCTATCTTGGCAGGTCCTGTGAGAGAG...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACATCAGAATGCCATATaGACGCTGGGATCGGAACCG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKHQNAI*TLGSEP
Trigger: CGGTTCCGATCCCAGCGTGCATATGGCATTCTGATG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGACTACACGCACTGTGTaGCACTCGTTATCATTGAGG +
Preference number: 4 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTETTRTV*HSLSLR
Trigger: CCTCAATGATAACGAGTGGCACACAGTGCGTGTAGT...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AATGACTGCAGGTCAAGGATTCCAATAAGGAAACAGAAGGTTGCAGATGTTAGACCTAGTATGATCACCTaGCATTTGACCTGTCATGGC +
Preference number: 4 (lower is better)
Translates to: NDCRSRIPIRKQKVADVRPSMIT*HLTCHG
Trigger: GCCATGACAGGTCAAATGGCAGGTGATCATACTAGG...TCTAACATCTGCAACCTTCTGTTTCCTTATTGGAATCCTTGACCTGCAGTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR GCA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATTTAAATGTCAAGCTCTaGAGGTGTCCAATGAAGTTG +
Preference number: 4 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHLNVKL*RCPMKL
Trigger: CAACTTCATTGGACACCTGCAGAGCTTGACATTTAA...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTTTAAATGTCAAGCTCTaGAGGTGTCCAATGAAGTTG +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCLNVKL*RCPMKL
Trigger: CAACTTCATTGGACACCTGCAGAGCTTGACATTTAA...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTTTAAATGTCAAGCTCTaGAGGTGTCCAATGAAGTTG +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSLNVKL*RCPMKL
Trigger: CAACTTCATTGGACACCTGCAGAGCTTGACATTTAA...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTACACAGGTCAATGTATaGCATTCCATTAAATGTCAA +
Preference number: 4 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVTQVNV*HSIKCQ
Trigger: TTGACATTTAATGGAATGGCATACATTGACCTGTGT...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACAAAAGCATTCTGTTACAGTGTGGAGGTTaGTGGTGTCCCTTGATATCA +
Preference number: 4 (lower is better)
Translates to: KGHLCSFKHSSCLHKSILLQCGG*WCPLIS
Trigger: TGATATCAAGGGACACCAGCAACCTCCACACTGTAA...CAGAATGCTTTTGTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR GCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCATTACAGTGTGGAGGTTaGTGGTGTCCCTTGATATCA +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLALQCGG*WCPLIS
Trigger: TGATATCAAGGGACACCAGCAACCTCCACACTGTAA...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAACCAGAGCCTGAAGCATaGATCGGTCAAAGCGAATTT +
Preference number: 4 (lower is better)
Translates to: FVPVSQHFHSVIHSNLPKPEPEA*IGQSEF
Trigger: AAATTCGCTTTGACCGATGCATGCTTCAGGCTCTGG...TTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR GCA 90 bp AAATGTCCATTTGACTCTTTAAAATGGACAGTTGAAACCACCGCCCCCAAACAACCAGAGCCTGAAGCATaGATCGGTCAAAGCGAATTT +
Preference number: 4 (lower is better)
Translates to: KCPFDSLKWTVETTAPKQPEPEA*IGQSEF
Trigger: AAATTCGCTTTGACCGATGCATGCTTCAGGCTCTGG...TTGTTTGGGGGCGGTGGTTTCAACTGTCCATTTTAAAGAGTCAAATGGACATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR GCA 90 bp ATATGCACCAAACACAGGCATTTCAACAGTAAGGGTCTGTCAACATTCACAAACAGGGCCAAGCTAAGATaGCAGCACATCAATTGGTTG +
Preference number: 4 (lower is better)
Translates to: ICTKHRHFNSKGLSTFTNRAKLR*QHINWL
Trigger: CAACCAATTGATGTGCTGGCATCTTAGCTTGGCCCT...GTTTGTGAATGTTGACAGACCCTTACTGTTGAAATGCCTGTGTTTGGTGCATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR GCA 90 bp TCTGAATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTAGGGCCAAGCTAAGATaGCAGCACATCAATTGGTTG +
Preference number: 4 (lower is better)
Translates to: SEFLLHFVPVSQHFHSVIRAKLR*QHINWL
Trigger: CAACCAATTGATGTGCTGGCATCTTAGCTTGGCCCT...AATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR GCA 90 bp CTGAATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCAAGCCTAATTCCTTGTaGGTGGTCTCACAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: LNSYFTLYQSHSTSILSFKPNSL*VVSQVG
Trigger: TCCAACTTGTGAGACCACGCACAAGGAATTAGGCTT...GAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR GCA 90 bp GAAGAGGAACCTAATTCCTTCATAATGATCTATGAGCTGTTTCCCTCCCCCAATAAGCCTAATTCCTTGTaGGTGGTCTCACAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: EEEPNSFIMIYELFPSPNKPNSL*VVSQVG
Trigger: TCCAACTTGTGAGACCACGCACAAGGAATTAGGCTT...ATTGGGGGAGGGAAACAGCTCATAGATCATTATGAAGGAATTAGGTTCCTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR GCA 90 bp CCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGCGGGCTTCAGCACCGCTaGAGCCAAAGCCTAATTCCT +
Preference number: 4 (lower is better)
Translates to: PKTQQIPILYKVTIHNYSGLQHR*SQSLIP
Trigger: AGGAATTAGGCTTTGGCTGCAGCGGTGCTGAAGCCC...GCTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR GCA 90 bp CCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATGTTTTGGAGAAAGGGATGCTTaGCTCTTTAGGGCACCATTT +
Preference number: 4 (lower is better)
Translates to: PVSQHFHSVIHSNLPKCFGERDA*LFRAPF
Trigger: AAATGGTGCCCTAAAGAGGCAAGCATCCCTTTCTCC...AAAACATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR GCA 90 bp ATATGCACCAAACACAGGCATTTCAACAGTAAGGGTCTGTCAACATTCACAAACGGAGAAAGGGATGCTTaGCTCTTTAGGGCACCATTT +
Preference number: 4 (lower is better)
Translates to: ICTKHRHFNSKGLSTFTNGERDA*LFRAPF
Trigger: AAATGGTGCCCTAAAGAGGCAAGCATCCCTTTCTCC...GTTTGTGAATGTTGACAGACCCTTACTGTTGAAATGCCTGTGTTTGGTGCATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR GCA 90 bp ACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCATTGGATGCTTGTGAATaGCTCAAGTCTGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: TLYQSHSTSILSFILTCPLDACE*LKSVSF
Trigger: GAAGGAGACAGACTTGAGGCATTCACAAGCATCCAA...TGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR GCA 90 bp TTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCAGACCAAAGGGAGGATaGACTTTGGAGACAACGTTC +
Preference number: 4 (lower is better)
Translates to: FTLYQSHSTSILSFILTCRPKGG*TLETTF
Trigger: GAACGTTGTCTCCAAAGTGCATCCTCCCTTTGGTCT...GCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR GCA 90 bp ACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGTCTTAACAATTACAATTGTTGTCTTCTTGGCTaGAGTCCTTGCCGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: THQLVQVEELYPGLNNYNCCLLG*SPCRGS
Trigger: GCTTCCGCGGCAAGGACTGCAGCCAAGAAGACAACA...ATTGTAATTGTTAAGACCTGGATACAACTCTTCCACCTGAACTAATTGATGAGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp ATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACATCGCCCATCATCAGGTaGGCCAGACCTTCCACATTG +
Preference number: 4 (lower is better)
Translates to: ILVTGSCALHRQIRYIATSPIIR*ARPSTL
Trigger: CAATGTGGAAGGTCTGGCGCACCTGATGATGGGCGA...TGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGCATATCTGATGGATTaGTGTGGATTCGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLAYLMD*CGFVCV
Trigger: CACACACACGAATCCACAGCAATCCATCAGATATGC...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTTTTGCTTCCATAACCTaGCCACATAATGGTTCTTAT +
Preference number: 4 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTFASIT*PHNGSY
Trigger: ATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAA...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAAAGGTGCTTTTACCTTTaGATCGTCCCCTTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKRCFYL*IVPLQG
Trigger: CCCCTGCAAGGGGACGATGCAAAGGTAAAAGCACCT...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000406316.6
CDS-3UTR GCA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAATGCTGCGGAGCGAGGTaGTTTTACCTTTGCATCGTC +
Preference number: 4 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKCCGAR*FYLCIV
Trigger: GACGATGCAAAGGTAAAAGCACCTCGCTCCGCAGCA...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406316.6
CDS-3UTR GCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTACATATTTCTAAGGTaGTGTATGTCTGAAATCCAG +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGYIFLR*CMSEIQ
Trigger: CTGGATTTCAGACATACAGCACCTTAGAAATATGTA...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCAAATCCTCAATCAACTaGAAACTATGCAGGGAACCC +
Preference number: 4 (lower is better)
Translates to: SMKQITPFVINTLAQPSSKSSIN*KLCREP
Trigger: GGGTTCCCTGCATAGTTTGCAGTTGATTGAGGATTT...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAGGTCTTCCCTTCAAATaGAGCCTTCTTTACTTTCCC +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAGLPFK*SLLYFP
Trigger: GGGAAAGTAAAGAAGGCTGCATTTGAAGGGAAGACC...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TGTTTAATTCATTGTGATTCTGCCAGCCCACAGCAGTGGTCTCTAACATGTCTCGAAAGACAAGCTTTCTaGCCTCATAGAGCTTACACT +
Preference number: 4 (lower is better)
Translates to: CLIHCDSASPQQWSLTCLERQAF*PHRAYT
Trigger: AGTGTAAGCTCTATGAGGGCAGAAAGCTTGTCTTTC...GAGACATGTTAGAGACCACTGCTGTGGGCTGGCAGAATCACAATGAATTAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
CDS-3UTR GCA 90 bp CAGATGGCACAAGGTGGGGATATTCACATAAGACAGACTTGGATTGATGTTATGATACCTACCTCCCAGTaGCCATTACCAATGCCAAAA +
Preference number: 4 (lower is better)
Translates to: QMAQGGDIHIRQTWIDVMIPTSQ*PLPMPK
Trigger: TTTTGGCATTGGTAATGGGCACTGGGAGGTAGGTAT...CATAACATCAATCCAAGTCTGTCTTATGTGAATATCCCCACCTTGTGCCATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS-3UTR GCA 90 bp TCTATGAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTATACATACTGTCATTTaGATAGTTGCTAGAGGCTTA +
Preference number: 4 (lower is better)
Translates to: SMNQEAKSHWTPTVSALGIHTVI*IVARGL
Trigger: TAAGCCTCTAGCAACTATGCAAATGACAGTATGTAT...ACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTCATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACTGCCATGGAAATGGTaGATGTGGTGCGCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKLPWKW*MWCAPK
Trigger: TTTGGGAGCGCACCACATCCACCATTTCCATGGCAG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000611589.4
ENST00000628364.2
ENST00000637906.1
CDS-3UTR CCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCAACTCCAATTTTTCCCTaGTGTATATGCAGTTCTAGG +
Preference number: 4 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSTPIFP*CICSSR
Trigger: CCTAGAACTGCATATACACCAGGGAAAAATTGGAGT...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATACTCCAATTTTTCCCTaGTGTATATGCAGTTCTAGG +
Preference number: 4 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHTPIFP*CICSSR
Trigger: CCTAGAACTGCATATACACCAGGGAAAAATTGGAGT...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp CCTGGTGCTGAAGCCTCAGATGCATTGAGAGCCAGTGTACTTTGTCTTTGCTCTATTATTATGGTTGCTTaGCTATTGAAGATTGTGAGC +
Preference number: 4 (lower is better)
Translates to: PGAEASDALRASVLCLCSIIMVA*LLKIVS
Trigger: GCTCACAATCTTCAATAGCCAAGCAACCATAATAAT...AGAGCAAAGACAAAGTACACTGGCTCTCAATGCATCTGAGGCTTCAGCACCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR CCA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAACCACTATGGCGATGTTaGCATCGTTTTCGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKPLWRC*HRFRLP
Trigger: TGGCAGCCGAAAACGATGCCAACATCGCCATAGTGG...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACCACTATGGCGATGTTaGCATCGTTTTCGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKPLWRC*HRFRLP
Trigger: TGGCAGCCGAAAACGATGCCAACATCGCCATAGTGG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000637906.1
CDS-3UTR CCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGCTGATTGCATGGCAGTaGCTGTTGACTCAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMLIAWQ*LLTQLS
Trigger: TGACAACTGAGTCAACAGCCACTGCCATGCAATCAG...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
ENST00000637906.1
CDS-3UTR CCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCATGTCATCTGTGGTCTaGCTAATGGGTTCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: SMKQITPFVINTLAQPSSMSSVV*LMGSFV
Trigger: GACAAAAGAACCCATTAGCCAGACCACAGATGACAT...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCGTCTTCTCTGGCAATTaGACTGACTTCTCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: LQQPELRCRLTNFASITCVFSGN*TDFSGK
Trigger: CTTTCCTGAGAAGTCAGTCCAATTGCCAGAGAAGAC...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCACATCAGACCCCAGCATaGTATAATCTTCTTGCGTGT +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAHQTPA*YNLLAC
Trigger: ACACGCAAGAAGATTATACCATGCTGGGGTCTGATG...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCCATCAGACCCCAGCATaGTATAATCTTCTTGCGTGT +
Preference number: 4 (lower is better)
Translates to: LQQPELRCRLTNFASITCHQTPA*YNLLAC
Trigger: ACACGCAAGAAGATTATACCATGCTGGGGTCTGATG...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCAGAAGGTCGGCTGTGCTaGGACTGCCTCCAACATAGA +
Preference number: 4 (lower is better)
Translates to: CRLTNFASITCPHNGSYSEGRLC*DCLQHR
Trigger: TCTATGTTGGAGGCAGTCCCAGCACAGCCGACCTTC...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCGAAGGTCGGCTGTGCTaGGACTGCCTCCAACATAGA +
Preference number: 4 (lower is better)
Translates to: CNNIISVHENFPMIASMPEGRLC*DCLQHR
Trigger: TCTATGTTGGAGGCAGTCCCAGCACAGCCGACCTTC...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp CCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGGAAGGTCGGCTGTGCTaGGACTGCCTCCAACATAGA +
Preference number: 4 (lower is better)
Translates to: PQNPTNSNLIQSYNTQLQEGRLC*DCLQHR
Trigger: TCTATGTTGGAGGCAGTCCCAGCACAGCCGACCTTC...CTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000625891.2
ENST00000628515.2
CDS-3UTR CCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCAATGCCACCACTCCATaGATCTTCATCTTAGGATCT +
Preference number: 4 (lower is better)
Translates to: SMKQITPFVINTLAQPSSNATTP*IFILGS
Trigger: AGATCCTAAGATGAAGATCCATGGAGTGGTGGCATT...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTGGAAATCAAATGATATaGAGCCAGTTTTCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGGNQMI*SQFSLH
Trigger: ATGCAAAGAAAACTGGCTCCATATCATTTGATTTCC...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGATGTCTTGGCTTGCCATaGCTAAATAAGATGAGGCCA +
Preference number: 4 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGCLGLP*LNKMRP
Trigger: TGGCCTCATCTTATTTAGCCATGGCAAGCCAAGACA...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACACCTTTATCATCTGTaGGTGCTTGGCATCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGHLYHL*VLGIFL
Trigger: CAGAAAGATGCCAAGCACCCACAGATGATAAAGGTG...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCCGGATATCTTTGCTTTaGCCATCGATGAACAAATCC +
Preference number: 4 (lower is better)
Translates to: SMKQITPFVINTLAQPSSRISLL*PSMNKS
Trigger: GGATTTGTTCATCGATGGCCAAAGCAAAGATATCCG...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp ATATTATACTTCAAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACATGCCATATGCACGCTaGGATCGGAACCGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: ILYFKGHLCSFKHSSCLHMPYAR*DRNRKE
Trigger: TTCCTTACGGTTCCGATCCCAGCGTGCATATGGCAT...GTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTTGAAGTATAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCACCTGTCATGGCCTGTTaGTCATCCACTGTTAACTTT +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAPVMAC*SSTVNF
Trigger: AAAGTTAACAGTGGATGACCAACAGGCCATGACAGG...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCACTTGGCAGGTTGTGCTaGGCCCTTCACATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: CRLTNFASITCPHNGSYSLGRLC*ALHILS
Trigger: AGAGAGGATGTGAAGGGCCCAGCACAACCTGCCAAG...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCGAACATGAGTCCTCTTaGCAGGTTGTGCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: CNNIISVHENFPMIASMPEHESS*QVVLGP
Trigger: AGGGCCCAGCACAACCTGCCAAGAGGACTCATGTTC...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTCGTGGTCTCACAAGTTaGATTTTACTTCTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGRGLTS*ILLLFS
Trigger: TGAAAAGAGAAGTAAAATCCAACTTGTGAGACCACG...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCTAATTCCTTGTGCGTaGTCTCACAAGTTGGATTTT +
Preference number: 4 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHLIPCA*SHKLDF
Trigger: AAAATCCAACTTGTGAGACCACGCACAAGGAATTAG...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATCTTCTGTCATAGCATaGGCTTCAGCACCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKSSVIA*ASAPLQ
Trigger: CTGCAGCGGTGCTGAAGCCCATGCTATGACAGAAGA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
CDS-3UTR CCA 90 bp TTCAGAATAAACCAAGTACATCACTGCTTACCAACAGCACCTATGGCTAACAGTTGTCTCCTTCAGATGTaGTGTCTTACAGCAGAACGG +
Preference number: 4 (lower is better)
Translates to: FRINQVHHCLPTAPMANSCLLQM*CLTAER
Trigger: CCGTTCTGCTGTAAGACACCACATCTGAAGGAGACA...ACTGTTAGCCATAGGTGCTGTTGGTAAGCAGTGATGTACTTGGTTTATTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CCA 90 bp CTTTCTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACGCCAGGTTCCACCAGTaGTACCAGGCCAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: LSLPKTQQIPILYKVTIHARFHQ*YQAKRK
Trigger: CTTCCTTTTGGCCTGGTACCACTGGTGGAACCTGGC...GTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CCA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCAGGGAGGATGCACTTTaGAGACAACGTTCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: LQQPELRCRLTNFASITCREDAL*RQRSGK
Trigger: TTTTCCAGAACGTTGTCTCCAAAGTGCATCCTCCCT...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp CAACAGATGGCACAAGGTGGGGATATTCACATAAGACAGACTTGGATTGATGTTAGGGAGGATGCACTTTaGAGACAACGTTCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: QQMAQGGDIHIRQTWIDVREDAL*RQRSGK
Trigger: TTTTCCAGAACGTTGTCTCCAAAGTGCATCCTCCCT...AACATCAATCCAAGTCTGTCTTATGTGAATATCCCCACCTTGTGCCATCTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR CCA 90 bp CCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGCCTGCGAGTCTTGAGCTaGAAGCTCATCTCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: PKTQQIPILYKVTIHNYSLRVLS*KLISLS
Trigger: CGAGAGCGAGATGAGCTTCCAGCTCAAGACTCGCAG...GCTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAACATTGTTGTCTTCTTaGCTGCAGTCCTTGCCGCGG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKTLLSS*LQSLPR
Trigger: CCGCGGCAAGGACTGCAGCCAAGAAGACAACAATGT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTAATAGTGAATGTATGTaGGAATGTGAGTATTTCAGG +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGNSECM*ECEYFR
Trigger: CCTGAAATACTCACATTCCCACATACATTCACTATT...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp GTTGGAGCTTTTCGCACTGCTGGGTTGTTTCTCCTTTACAACAGCCCCATTGGAAATAGTGAATGTATGTaGGAATGTGAGTATTTCAGG +
Preference number: 4 (lower is better)
Translates to: VGAFRTAGLFLLYNSPIGNSECM*ECEYFR
Trigger: CCTGAAATACTCACATTCCCACATACATTCACTATT...TCCAATGGGGCTGTTGTAAAGGAGAAACAACCCAGCAGTGCGAAAAGCTCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635519.1
CDS-3UTR CCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTATCTGATGGATTGCTGTaGATTCGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLSDGLL*IRVCVC
Trigger: ACACACACACACACGAATCCACAGCAATCCATCAGA...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTGGTATGAAGATACTTaGGATTCAAGTCATTTTCTC +
Preference number: 4 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGWYEDT*DSSHFL
Trigger: GAGAAAATGACTTGAATCCCAAGTATCTTCATACCA...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp ATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACAGACTGTGTCAGCCCTTaGTCTTGGACTTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: ILVTGSCALHRQIRYIATDCVSP*SWTSQP
Trigger: AGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTC...TGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CCA 90 bp TTAGATATTACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGTCTTAACGACTGTGTCAGCCCTTaGTCTTGGACTTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LDITHQLVQVEELYPGLNDCVSP*SWTSQP
Trigger: AGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTC...GTTAAGACCTGGATACAACTCTTCCACCTGAACTAATTGATGAGTAATATCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
3UTR CAA 72 bp TTTGAATCCATCTACCCACAACCAGCAAAAGTAAGGTaGGCTTTGAATAACAGATCTTCAGCTGCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: FESIYPQPAKVR*ALNNRSSAAPK
Trigger: CTTTGGGGCAGCTGAAGATCTGTTATTCAAAGCCAACCTTACTTTTGCTGGTTGTGGGTAGATGGATTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCCTCACTTCTACATaGCAGACATCCACCGCGAAT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKVLTST*QTSTAN
Trigger: ATTCGCGGTGGATGTCTGTCATGTAGAAGTGAGGAC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000628364.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGAGGCCACTTATACGTaGTTTGTCCACCACCTTTGC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKEATYT*FVHHLC
Trigger: GCAAAGGTGGTGGACAAATCACGTATAAGTGGCCTC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000637906.1
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACATGGCAGTGGCTGTTaGCTCAGTTGTCATAGAGGA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKHGSGC*LSCHRG
Trigger: TCCTCTATGACAACTGAGTCAACAGCCACTGCCATG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000637906.1
CDS-3UTR TCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCATTTTGTGTTGTGCCTTaGTGCTGTAGTACTCCTTTG +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAFCVVP*CCSTPL
Trigger: CAAAGGAGTACTACAGCATCAAGGCACAACACAAAA...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTATTTTGTGTTGTGCCTTaGTGCTGTAGTACTCCTTTG +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLFCVVP*CCSTPL
Trigger: CAAAGGAGTACTACAGCATCAAGGCACAACACAAAA...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
CDS-3UTR TCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACAGAAAGGGGCTTTTTaGATGTGTTCCTACACAAGT +
Preference number: 4 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGQKGAF*MCSYTS
Trigger: ACTTGTGTAGGAACACATTCAAAAAGCCCCTTTCTG...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTACAGAAAGGGGCTTTTTaGATGTGTTCCTACACAAGT +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLQKGAF*MCSYTS
Trigger: ACTTGTGTAGGAACACATTCAAAAAGCCCCTTTCTG...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCATAATAAGCGTGCATaGAAATTTCCCAATGATTGC +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSHNKRA*KFPNDC
Trigger: GCAATCATTGGGAAATTTTCATGCACGCTTATTATG...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCCATAATAAGCGTGCATaGAAATTTCCCAATGATTGC +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFHNKRA*KFPNDC
Trigger: GCAATCATTGGGAAATTTTCATGCACGCTTATTATG...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTATCAGTCCATTCCTCTaGAGGGTTTTAAATGACAGA +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTISPFL*RVLNDR
Trigger: TCTGTCATTTAAAACCCTTCAGAGGAATGGACTGAT...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCGCCGATTTCCCAGTGTaGAGCATCAGTCCATTCCTC +
Preference number: 4 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSIADFPV*SISPFL
Trigger: GAGGAATGGACTGATGCTTCACACTGGGAAATCGGC...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp CCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGCGCCGATTTCCCAGTGTaGAGCATCAGTCCATTCCTC +
Preference number: 4 (lower is better)
Translates to: PKTQQIPILYKVTIHNYSADFPV*SISPFL
Trigger: GAGGAATGGACTGATGCTTCACACTGGGAAATCGGC...GCTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625891.2
ENST00000628515.2
CDS-3UTR TCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCATTTTCAGGGCAAGATTaGCATAATCAGCCGATTTCC +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAFSGQD*HNQPIS
Trigger: GGAAATCGGCTGATTATGTCAATCTTGCCCTGAAAA...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GAAGAGGAACCTAATTCCTTCATAATGATCTATGAGCTGTTTCCCTCCCCCAATTTTTCAGGGCAAGATTaGCATAATCAGCCGATTTCC +
Preference number: 4 (lower is better)
Translates to: EEEPNSFIMIYELFPSPNFSGQD*HNQPIS
Trigger: GGAAATCGGCTGATTATGTCAATCTTGCCCTGAAAA...ATTGGGGGAGGGAAACAGCTCATAGATCATTATGAAGGAATTAGGTTCCTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000625891.2
ENST00000628515.2
CDS-3UTR TCA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCTGCTTCAAAGGCCCCTaGTCCCAAATTAATGACCAG +
Preference number: 4 (lower is better)
Translates to: SFQLQQPELRCRLTNFASCFKGP*SQINDQ
Trigger: CTGGTCATTAATTTGGGATCAGGGGCCTTTGAAGCA...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATGCTTGGCATCTTTCTaGTGTCTTGGCTTGCCATGG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKCLASF*CLGLPW
Trigger: CCATGGCAAGCCAAGACATCAGAAAGATGCCAAGCA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCAGACAGAAATGGTACCTaGCCGTCCGTCTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: SYYVTELDFESNIILQRPDRNGT*PSVSLE
Trigger: TTCCAGAGAGACGGACGGTCAGGTACCATTTCTGTC...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR TCA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCGACAGAAATGGTACCTaGCCGTCCGTCTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSIDRNGT*PSVSLE
Trigger: TTCCAGAGAGACGGACGGTCAGGTACCATTTCTGTC...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGAGTACGCAACGTGTTaGCAGAAATGGTACCTGACC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKEYATC*QKWYLT
Trigger: GGTCAGGTACCATTTCTGTCAACACGTTGCGTACTC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGAATGACTACGGGGAGCTaGATTTTCATAAACATGCTC +
Preference number: 4 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGMTTGS*IFINML
Trigger: GAGCATGTTTATGAAAATTCAGCTCCCCGTAGTCAT...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAATGACTACGGGGAGCTaGATTTTCATAAACATGCTC +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLMTTGS*IFINML
Trigger: GAGCATGTTTATGAAAATTCAGCTCCCCGTAGTCAT...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGAGCCACTCGTTATCATTaGGGTTATAGCCAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGATRYH*GYSQQK
Trigger: TTTTTGCTGGCTATAACCTCAATGATAACGAGTGGC...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTGCTGGTGTCCCTTaGTATCATCACGTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKVAGVP*YHHVVP
Trigger: TGGCACAACGTGATGATATCAAGGGACACCAGCAAC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCATATATAAGTCACTCTTaGGGTCTAAGTTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAYISHS*GLSSWL
Trigger: GAGCCAGGAACTTAGACCTCAAGAGTGACTTATATA...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCAGATGCCAGGCAGCCTTaGAAGCCTTCTTTGGCATGT +
Preference number: 4 (lower is better)
Translates to: SYYVTELDFESNIILQRPDARQP*KPSLAC
Trigger: ACATGCCAAAGAAGGCTTTCAAGGCTGCCTGGCATC...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR TCA 90 bp ATATTATACTTCAAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACACCTTGATTGGAACATaGGTCCTCTTGGCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: ILYFKGHLCSFKHSSCLHTLIGT*VLLAGC
Trigger: ACAACCTGCCAAGAGGACTCATGTTCCAATCAAGGT...GTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTTGAAGTATAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR TCA 90 bp ATATTATACTTCAAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACTGCAGAGTGGTCCACTaGAGGAAGTCATACTACAGT +
Preference number: 4 (lower is better)
Translates to: ILYFKGHLCSFKHSSCLHCRVVH*RKSYYS
Trigger: ACTGTAGTATGACTTCCTTCAGTGGACCACTCTGCA...GTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTTGAAGTATAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR TCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTTTGGTTGTGTGTTGGTaGTGCATTTTGGTTTTATCT +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSLVVCW*CILVLS
Trigger: AGATAAAACCAAAATGCATCACCAACACACAACCAA...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR TCA 90 bp CTTTCTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACCCAACTGGAAAACGTTaGCCCCAGTGGTACAGGGTA +
Preference number: 4 (lower is better)
Translates to: LSLPKTQQIPILYKVTIHPTGKR*PQWYRV
Trigger: TACCCTGTACCACTGGGGTCAACGTTTTCCAGTTGG...GTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTGAAGATTGTGAGCTaGCGCCCTTTGTCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKLKIVS*RPLSSS
Trigger: GCTACTCGACAAAGGGCGTCAGCTCACAATCTTCAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000625672.2
ENST00000628364.2
CDS-3UTR TCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAAAGAATCCCATCCACTaGTATTGTCACCGAACAATG +
Preference number: 4 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEKNPIH*YCHRTM
Trigger: CATTGTTCGGTGACAATATCAGTGGATGGGATTCTT...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404971.5
CDS-3UTR TCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGGGAGCAAGATCTCAATaGAGCAAATCACCCCATTTG +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMGARSQ*SKSPHL
Trigger: CAAATGGGGTGATTTGCTTCATTGAGATCTTGCTCC...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGAAGAATCCCATCCACTaGTATTGTCACCATAGCGTG +
Preference number: 4 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTEKNPIH*YCHHSV
Trigger: CACGCTATGGTGACAATATCAGTGGATGGGATTCTT...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401669.7
ENST00000406316.6
CDS-3UTR TCA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCAAGGTGCTGTATGTCTaGAATCCAGGCCACTTCTTG +
Preference number: 4 (lower is better)
Translates to: SFQLQQPELRCRLTNFASKVLYV*NPGHFL
Trigger: CAAGAAGTGGCCTGGATTTCAGACATACAGCACCTT...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTATGCAGGGAACCCTaGTATGTTTGGTATGAAGAT +
Preference number: 4 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGLCREP*YVWYED
Trigger: ATCTTCATACCAAACATATCAGGGTTCCCTGCATAG...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAATTATGCCAAGTCGTGTaGAATCCTCAATCAACTGCA +
Preference number: 4 (lower is better)
Translates to: AVVLLCFMNACGHHCLLELCQVV*NPQSTA
Trigger: TGCAGTTGATTGAGGATTTCACACGACTTGGCATAA...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTGCAACTAATACTGTATaGGTTTATGGTTTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCATNTV*VYGFWH
Trigger: ATGCCAGAAACCATAAACTCATACAGTATTAGTTGC...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCTGAATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTGACTTGAGAGGAGGATaGAGAAGGTTATCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: SEFLLHFVPVSQHFHSVIDLRGG*RRLSKG
Trigger: GCCTTTTGATAACCTTCTTCATCCTCCTCTCAAGTC...AATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR TCA 90 bp TTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACACAGGCAGTTTCCAAACCCTaGGTTGTTATGGAGCACAGA +
Preference number: 4 (lower is better)
Translates to: LVTGSCALHRQIRYIATQAVSKP*VVMEHR
Trigger: TCTGTGCTCCATAACAACTCAGGGTTTGGAAACTGC...CTGTGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
CDS-3UTR TCA 90 bp ATATGCACCAAACACAGGCATTTCAACAGTAAGGGTCTGTCAACATTCACAAACGTGTTTAATTCATTGTaGTTCTGCCAGCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: ICTKHRHFNSKGLSTFTNVFNSL*FCQPTA
Trigger: TGCTGTGGGCTGGCAGAATCACAATGAATTAAACAC...GTTTGTGAATGTTGACAGACCCTTACTGTTGAAATGCCTGTGTTTGGTGCATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
CDS-3UTR TCA 90 bp CAACAGATGGCACAAGGTGGGGATATTCACATAAGACAGACTTGGATTGATGTTCAGCCTCCAGACGTTTaGGAAATAAGTTTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: QQMAQGGDIHIRQTWIDVQPPDV*EISFCY
Trigger: GTAACAGAAACTTATTTCTCAAACGTCTGGAGGCTG...AACATCAATCCAAGTCTGTCTTATGTGAATATCCCCACCTTGTGCCATCTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR TCA 90 bp CAGATGGCACAAGGTGGGGATATTCACATAAGACAGACTTGGATTGATGTTATGTTTCTCCCTTTCAAGTaGGGACACAAAGAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: QMAQGGDIHIRQTWIDVMFLPFK*GHKEKV
Trigger: TACCTTCTCTTTGTGTCCTCACTTGAAAGGGAGAAA...CATAACATCAATCCAAGTCTGTCTTATGTGAATATCCCCACCTTGTGCCATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR TCA 90 bp ATATGCACCAAACACAGGCATTTCAACAGTAAGGGTCTGTCAACATTCACAAACGATTTGATTAGGTCCTaGGGGCAGAGCCTTTATGAA +
Preference number: 4 (lower is better)
Translates to: ICTKHRHFNSKGLSTFTNDLIRS*GQSLYE
Trigger: TTCATAAAGGCTCTGCCCTCAGGACCTAATCAAATC...GTTTGTGAATGTTGACAGACCCTTACTGTTGAAATGCCTGTGTTTGGTGCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp TTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATTCTGATATTATAAGGTaGAACTCCGGTCTTCCCACG +
Preference number: 4 (lower is better)
Translates to: LYQSHSTSILSFILTCPNSDIIR*NSGLPT
Trigger: CGTGGGAAGACCGGAGTTTCACCTTATAATATCAGA...ATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR TCA 90 bp TTCAGAATAAACCAAGTACATCACTGCTTACCAACAGCACCTATGGCTAACAGTCTTCATAATGATCTATaGGCTGTTTCCCTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: FRINQVHHCLPTAPMANSLHNDL*AVSLPQ
Trigger: TTGGGGGAGGGAAACAGCTCATAGATCATTATGAAG...ACTGTTAGCCATAGGTGCTGTTGGTAAGCAGTGATGTACTTGGTTTATTCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR TCA 90 bp CATGATAAGGGATTTTGCAGTTTCCAAACCCTGAGTTGTTATGGAGCACAGAAGGTTCATGTGCATAAATaGCACCTAGCAGACAACAAG +
Preference number: 4 (lower is better)
Translates to: HDKGFCSFQTLSCYGAQKVHVHK*HLADNK
Trigger: CTTGTTGTCTGCTAGGTGTCATTTATGCACATGAAC...CTTCTGTGCTCCATAACAACTCAGGGTTTGGAAACTGCAAAATCCCTTATCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS-3UTR GCA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCCCATCATTAATGATTaGATTGGATTCTTCAATGGC +
Preference number: 4 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHPIIND*IGFFNG
Trigger: GCCATTGAAGAATCCAATGCAATCATTAATGATGGG...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
ENST00000637906.1
CDS-3UTR GCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGGCATCGTTTTCGGCTaGCATATTCAGAACTTTCAA +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLGIVFG*HIQNFQ
Trigger: TTGAAAGTTCTGAATATGGCAGCCGAAAACGATGCC...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
ENST00000637906.1
CDS-3UTR GCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGCCTTTGCTTTATGAATaGGTGCGGTCATCACTGTCT +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMPLLYE*VRSSLS
Trigger: AGACAGTGATGACCGCACGCATTCATAAAGCAAAGG...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
CDS-3UTR GCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGCCTTTGCTTTATGAATaGGTGCGGTCATCACTGTCT +
Preference number: 4 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTEPLLYE*VRSSLS
Trigger: AGACAGTGATGACCGCACGCATTCATAAAGCAAAGG...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGGCTGTAGTACTCCTTTaGTTTATGAATGCGTGCGGT +
Preference number: 4 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTEAVVLL*FMNACG
Trigger: ACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGGCTGTAGTACTCCTTTaGTTTATGAATGCGTGCGGT +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMAVVLL*FMNACG
Trigger: ACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
CDS-3UTR GCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAAACTCTTAAAGGTTTaGAGGTTGAGTCACTCAAAA +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGKLLKV*RLSHSK
Trigger: TTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTAAACTCTTAAAGGTTTaGAGGTTGAGTCACTCAAAA +
Preference number: 4 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTKLLKV*RLSHSK
Trigger: TTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCAACCACTGCTCCAGTTaGACCAGGCGGCAAACTCTT +
Preference number: 4 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSINHCSS*TRRQTL
Trigger: AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTT...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTAAATTTCCCAATGATTaGATCTATGCCCTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTKFPND*IYALLF
Trigger: AAACAAGAGGGCATAGATGCAATCATTGGGAAATTT...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTGTGACTTTCACATCATaGCAGGCATTATCATTAAAC +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCVTFTS*QALSLN
Trigger: GTTTAATGATAATGCCTGGCATGATGTGAAAGTCAC...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCGTGACTTTCACATCATaGCAGGCATTATCATTAAAC +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFVTFTS*QALSLN
Trigger: GTTTAATGATAATGCCTGGCATGATGTGAAAGTCAC...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACGGCTGTGCTGGGACTaGCTCCAACATAGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKRLCWD*LQHRKS
Trigger: ACTTTTTCTATGTTGGAGGCAGTCCCAGCACAGCCG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTATCTTAGGATCTCCTTaGTTGGCAAGTCGAGATAAT +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTILGSP*LASRDN
Trigger: ATTATCTCGACTTGCCAAGCAAGGAGATCCTAAGAT...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTATTCTCACATTTAAATaGCACCACTCCATGGATCTT +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSILTFK*HHSMDL
Trigger: AAGATCCATGGAGTGGTGGCATTTAAATGTGAGAAT...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCATTCTCACATTTAAATaGCACCACTCCATGGATCTT +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFILTFK*HHSMDL
Trigger: AAGATCCATGGAGTGGTGGCATTTAAATGTGAGAAT...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCACCCATCCCTGCACATaGCATTGTTTTTGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: SFQLQQPELRCRLTNFASTHPCT*HCFCKG
Trigger: ACCCTTGCAAAAACAATGGCATGTGCAGGGATGGGT...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCACATCAGAATGCCATATaGACGCTGGGATCGGAACCG +
Preference number: 4 (lower is better)
Translates to: SYYVTELDFESNIILQRPHQNAI*TLGSEP
Trigger: CGGTTCCGATCCCAGCGTGCATATGGCATTCTGATG...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATGGTTGCCATCAGAATaGCATATGCACGCTGGGATC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKWLPSE*HMHAGI
Trigger: GATCCCAGCGTGCATATGGCATTCTGATGGCAACCA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCCCTAGTATGATCACCTaGCATTTGACCTGTCATGGC +
Preference number: 4 (lower is better)
Translates to: SFQLQQPELRCRLTNFASPSMIT*HLTCHG
Trigger: GCCATGACAGGTCAAATGGCAGGTGATCATACTAGG...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp ATATTATACTTCAAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACGCTCCGGCGGTGATTTaGGTTGTGATTTTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: ILYFKGHLCSFKHSSCLHAPAVI*VVIFVS
Trigger: TGACACAAAAATCACAACGCAAATCACCGCCGGAGC...GTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTTGAAGTATAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR GCA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCGCTCCGGCGGTGATTTaGGTTGTGATTTTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: SFQLQQPELRCRLTNFASAPAVI*VVIFVS
Trigger: TGACACAAAAATCACAACGCAAATCACCGCCGGAGC...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp ATATTATACTTCAAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACTCTCGATCTGTCCGTTaGAGAAAAGAGCATCGGAGA +
Preference number: 4 (lower is better)
Translates to: ILYFKGHLCSFKHSSCLHSRSVR*RKEHRR
Trigger: TCTCCGATGCTCTTTTCTGCAACGGACAGATCGAGA...GTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTTGAAGTATAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR GCA 90 bp AAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACAAAAGCATTCTGTTCAAGCATAGCAGTTaGCTCCACAAAAGCATTCTG +
Preference number: 4 (lower is better)
Translates to: KGHLCSFKHSSCLHKSILFKHSS*LHKSIL
Trigger: CAGAATGCTTTTGTGGAGGCAACTGCTATGCTTGAA...CAGAATGCTTTTGTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR GCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTTGCAAGTTTTCACAGTaGCATCTCATATCCATGTCT +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTCKFSQ*HLISMS
Trigger: AGACATGGATATGAGATGGCACTGTGAAAACTTGCA...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378262.7
ENST00000412315.5
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGAATGTCATCTGTGGTCTaGAAGTTTTCACAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGMSSVV*KFSQCH
Trigger: ATGGCACTGTGAAAACTTGCAGACCACAGATGACAT...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378262.7
ENST00000412315.5
ENST00000635519.1
CDS-3UTR GCA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCAGGGCCAAGCTAAGATaGCAGCACATCAATTGGTTG +
Preference number: 4 (lower is better)
Translates to: SFQLQQPELRCRLTNFASRAKLR*QHINWL
Trigger: CAACCAATTGATGTGCTGGCATCTTAGCTTGGCCCT...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTTTCTCTCTGCCTCTaGAGGGCCAAGCTAAGATGC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKFSLCL*RAKLRC
Trigger: GCATCTTAGCTTGGCCCTGCAGAGGCAGAGAGAAAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
CDS-3UTR GCA 90 bp GATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACTTTTCTCTCTGCCTCTaGAGGGCCAAGCTAAGATGC +
Preference number: 4 (lower is better)
Translates to: DFSNWKLCTSQTNSLYSNFSLCL*RAKLRC
Trigger: GCATCTTAGCTTGGCCCTGCAGAGGCAGAGAGAAAA...GTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR GCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGAAGCCTAATTCCTTGTaGGTGGTCTCACAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTEKPNSL*VVSQVG
Trigger: TCCAACTTGTGAGACCACGCACAAGGAATTAGGCTT...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR GCA 90 bp ATATGCACCAAACACAGGCATTTCAACAGTAAGGGTCTGTCAACATTCACAAACAAGCCTAATTCCTTGTaGGTGGTCTCACAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: ICTKHRHFNSKGLSTFTNKPNSL*VVSQVG
Trigger: TCCAACTTGTGAGACCACGCACAAGGAATTAGGCTT...GTTTGTGAATGTTGACAGACCCTTACTGTTGAAATGCCTGTGTTTGGTGCATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR GCA 90 bp TTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATTGGATGCTTGTGAATaGCTCAAGTCTGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: FVPVSQHFHSVIHSNLPKLDACE*LKSVSF
Trigger: GAAGGAGACAGACTTGAGGCATTCACAAGCATCCAA...TTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR GCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTATATTTGCTACTGTATaGACGTTTGGATCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTIFATV*TFGSSS
Trigger: GCTGGAAGATCCAAACGTGCATACAGTAGCAAATAT...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCATATTTGCTACTGTATaGACGTTTGGATCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SMKQITPFVINTLAQPSSIFATV*TFGSSS
Trigger: GCTGGAAGATCCAAACGTGCATACAGTAGCAAATAT...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTTTTGCTTCCATAACCTaGCCACATAATGGTTCTTAT +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSFASIT*PHNGSY
Trigger: ATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAA...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGAAAATCCTCAATCAACTaGAAACTATGCAGGGAACCC +
Preference number: 4 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGKSSIN*KLCREP
Trigger: GGGTTCCCTGCATAGTTTGCAGTTGATTGAGGATTT...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TGCAGTTTCCAAACCCTGAGTTGTTATGGAGCACAGAAGGATCAACATCAACTCAGCCTCCAATCAAAGTaGCAACATTCGCTGATAATT +
Preference number: 4 (lower is better)
Translates to: CSFQTLSCYGAQKDQHQLSLQSK*QHSLII
Trigger: AATTATCAGCGAATGTTGGCACTTTGATTGGAGGCT...GAGTTGATGTTGATCCTTCTGTGCTCCATAACAACTCAGGGTTTGGAAACTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR GCA 90 bp TGCACCCACAGCAGTACCATTTCAGTGGTGCACATGCTTAGACTTATGTCTCAAATGGCAAATTACACATaGTTCTGGATTTCGTACCAA +
Preference number: 4 (lower is better)
Translates to: CTHSSTISVVHMLRLMSQMANYT*FWISYQ
Trigger: TTGGTACGAAATCCAGAAGCATGTGTAATTTGCCAT...TTGAGACATAAGTCTAAGCATGTGCACCACTGAAATGGTACTGCTGTGGGTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATGGAAATGGTGGATGTaGTGCGCTCCCAAACTGGAT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKWKWWM*CAPKLD
Trigger: ATCCAGTTTGGGAGCGCACCACATCCACCATTTCCA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000611589.4
ENST00000628364.2
ENST00000637906.1
CDS-3UTR CCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTATTATTATGGTTGCTTaGCTATTGAAGATTGTGAGC +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGIIMVA*LLKIVS
Trigger: GCTCACAATCTTCAATAGCCAAGCAACCATAATAAT...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCCCACTATGGCGATGTTaGCATCGTTTTCGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: CNNIISVHENFPMIASMPPLWRC*HRFRLP
Trigger: TGGCAGCCGAAAACGATGCCAACATCGCCATAGTGG...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCATCACATTTCCCACTATaGCGATGTTGGCATCGTTTT +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLASHFPL*RCWHRF
Trigger: AAAACGATGCCAACATCGCCATAGTGGGAAATGTGA...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATGTCATCTGTGGTCTaGCTAATGGGTTCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAMSSVV*LMGSFV
Trigger: GACAAAAGAACCCATTAGCCAGACCACAGATGACAT...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGTCATCTGTGGTCTaGCTAATGGGTTCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEMSSVV*LMGSFV
Trigger: GACAAAAGAACCCATTAGCCAGACCACAGATGACAT...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
ENST00000637906.1
CDS-3UTR CCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGAAGCTTTTCGCACTGCTaGGTTGTTTCTCCTTTACAA +
Preference number: 4 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGSFSHC*VVSPLQ
Trigger: TTGTAAAGGAGAAACAACCCAGCAGTGCGAAAAGCT...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAAGCTTTTCGCACTGCTaGGTTGTTTCTCCTTTACAA +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLASFSHC*VVSPLQ
Trigger: TTGTAAAGGAGAAACAACCCAGCAGTGCGAAAAGCT...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCAGCTTTTCGCACTGCTaGGTTGTTTCTCCTTTACAA +
Preference number: 4 (lower is better)
Translates to: LQQPELRCRLTNFASITCSFSHC*VVSPLQ
Trigger: TTGTAAAGGAGAAACAACCCAGCAGTGCGAAAAGCT...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAAGCTTTTCGCACTGCTaGGTTGTTTCTCCTTTACAA +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLSFSHC*VVSPLQ
Trigger: TTGTAAAGGAGAAACAACCCAGCAGTGCGAAAAGCT...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
CDS-3UTR CCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGGTCTTCTCTGGCAATTaGACTGACTTCTCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMVFSGN*TDFSGK
Trigger: CTTTCCTGAGAAGTCAGTCCAATTGCCAGAGAAGAC...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAAATGCCACCACTCCATaGATCTTCATCTTAGGATCT +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLANATTP*IFILGS
Trigger: AGATCCTAAGATGAAGATCCATGGAGTGGTGGCATT...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAAGAGATGAAAGACTCTaGGGTTTCAAAGGTGATTGG +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLRDERL*GFKGDW
Trigger: CCAATCACCTTTGAAACCCCAGAGTCTTTCATCTCT...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGTGTCTTGGCTTGCCATaGCTAAATAAGATGAGGCCA +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMCLGLP*LNKMRP
Trigger: TGGCCTCATCTTATTTAGCCATGGCAAGCCAAGACA...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGTGTCTTGGCTTGCCATaGCTAAATAAGATGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTECLGLP*LNKMRP
Trigger: TGGCCTCATCTTATTTAGCCATGGCAAGCCAAGACA...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp AAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACAAAAGCATTCTGCGGATATCTTTGCTTTaGCCATCGATGAACAAATCC +
Preference number: 4 (lower is better)
Translates to: KGHLCSFKHSSCLHKSILRISLL*PSMNKS
Trigger: GGATTTGTTCATCGATGGCCAAAGCAAAGATATCCG...CAGAATGCTTTTGTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAACGGATATCTTTGCTTTaGCCATCGATGAACAAATCC +
Preference number: 4 (lower is better)
Translates to: AVVLLCFMNACGHHCLLERISLL*PSMNKS
Trigger: GGATTTGTTCATCGATGGCCAAAGCAAAGATATCCG...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAATGCCATATGCACGCTaGGATCGGAACCGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKMPYAR*DRNRKE
Trigger: TTCCTTACGGTTCCGATCCCAGCGTGCATATGGCAT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACCATTTGACCTGTCATaGCCTGTTGGTCATCCACTG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKPFDLS*PVGHPL
Trigger: CAGTGGATGACCAACAGGCCATGACAGGTCAAATGG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAAGCTCCCTGACTCAGTaGGAGATCAAGATGATAAAT +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLASSLTQ*EIKMIN
Trigger: ATTTATCATCTTGATCTCCCACTGAGTCAGGGAGCT...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378262.7
ENST00000412315.5
ENST00000635519.1
CDS-3UTR CCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGAAGCTCCCTGACTCAGTaGGAGATCAAGATGATAAAT +
Preference number: 4 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGSSLTQ*EIKMIN
Trigger: ATTTATCATCTTGATCTCCCACTGAGTCAGGGAGCT...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378262.7
ENST00000412315.5
ENST00000635519.1
CDS-3UTR CCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAACAAGGATGTCATCTGTaGTCTGCAAGTTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEQGCHL*SASFHS
Trigger: ACTGTGAAAACTTGCAGACCACAGATGACATCCTTG...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378262.7
ENST00000412315.5
ENST00000635519.1
CDS-3UTR CCA 90 bp TTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCTGCCAGCACATCAATTaGTTGTGTGTTGGTGATGCA +
Preference number: 4 (lower is better)
Translates to: FTLYQSHSTSILSFILTCCQHIN*LCVGDA
Trigger: TGCATCACCAACACACAACCAATTGATGTGCTGGCA...GCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR CCA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCTGTCTCCTTCAGATGTaGTGTCTTACAGCAGAACGG +
Preference number: 4 (lower is better)
Translates to: SFQLQQPELRCRLTNFASCLLQM*CLTAER
Trigger: CCGTTCTGCTGTAAGACACCACATCTGAAGGAGACA...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp TTCAGAATAAACCAAGTACATCACTGCTTACCAACAGCACCTATGGCTAACAGTAGGGAGGATGCACTTTaGAGACAACGTTCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: FRINQVHHCLPTAPMANSREDAL*RQRSGK
Trigger: TTTTCCAGAACGTTGTCTCCAAAGTGCATCCTCCCT...ACTGTTAGCCATAGGTGCTGTTGGTAAGCAGTGATGTACTTGGTTTATTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CCA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAATAGTGAATGTATGTaGGAATGTGAGTATTTCAGG +
Preference number: 4 (lower is better)
Translates to: GLTSQESASTLAKSRIIGNSECM*ECEYFR
Trigger: CCTGAAATACTCACATTCCCACATACATTCACTATT...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTCCCTTCTTATTTAACTaGCTTTCCCTGAGTAAGACT +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTPFLFN*LSLSKT
Trigger: AGTCTTACTCAGGGAAAGCCAGTTAAATAAGAAGGG...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp TTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATTCTTTACTTTTACCTTaGTCGCCCATCATCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LYQSHSTSILSFILTCPNSLLLP*SPIIRC
Trigger: GCACCTGATGATGGGCGACCAAGGTAAAAGTAAAGA...ATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR CCA 90 bp CTGAATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCACAGATGGCACAAGGTaGGGATATTCACATAAGACA +
Preference number: 4 (lower is better)
Translates to: LNSYFTLYQSHSTSILSFTDGTR*GYSHKT
Trigger: TGTCTTATGTGAATATCCCCACCTTGTGCCATCTGT...GAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CCA 90 bp TTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATAATTCCTCCAACAGATaGCACAAGGTGGGGATATTC +
Preference number: 4 (lower is better)
Translates to: LYQSHSTSILSFILTCPNNSSNR*HKVGIF
Trigger: GAATATCCCCACCTTGTGCCATCTGTTGGAGGAATT...ATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR CCA 90 bp GTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACACAGGACAACCCTGAGTTGTTATaGAGCACAGAAGGATCAACA +
Preference number: 4 (lower is better)
Translates to: VTGSCALHRQIRYIATQDNPELL*STEGST
Trigger: TGTTGATCCTTCTGTGCTCCATAACAACTCAGGGTT...GTCCTGTGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
CDS-3UTR CCA 90 bp AGGGAAATAAGCATTTCAGAGCATTTCGGGGGCACAAAGAGACCAGGAAATGCAGATCAAACAGAAAGGTaGATATTTGGAAGGAACAGT +
Preference number: 4 (lower is better)
Translates to: REISISEHFGGTKRPGNADQTER*IFGRNS
Trigger: ACTGTTCCTTCCAAATATCCACCTTTCTGTTTGATC...TGCATTTCCTGGTCTCTTTGTGCCCCCGAAATGCTCTGAAATGCTTATTTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626249.2
CDS-3UTR CCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTACAAGGATGTCATCTGTaGTTACCTGCAAGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLQGCHL*LPASFH
Trigger: GTGAAAACTTGCAGGTAACCACAGATGACATCCTTG...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636345.1
CDS-3UTR CCA 90 bp TGCACCCACAGCAGTACCATTTCAGTGGTGCACATGCTTAGACTTATGTCTCAATTCTTACATATTGCCTaGCTCATGTTCAGATGCTTT +
Preference number: 4 (lower is better)
Translates to: CTHSSTISVVHMLRLMSQFLHIA*LMFRCF
Trigger: AAAGCATCTGAACATGAGCCAGGCAATATGTAAGAA...TTGAGACATAAGTCTAAGCATGTGCACCACTGAAATGGTACTGCTGTGGGTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675235.1
3UTR CAA 72 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTaGGCACAACCCTCTTCCTTCCTGCTTTTCAATTTG +
Preference number: 4 (lower is better)
Translates to: SMKQITPFVINT*AQPSSFLLFNL
Trigger: CAAATTGAAAAGCAGGAAGGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
3UTR CAA 72 bp TGGTCTCTAACATGTCTCCAGCTGACTTCGCCATTTTaGTCATGTACACATGATAAGGGATTTTGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: WSLTCLQLTSPF*SCTHDKGFCSF
Trigger: GAAACTGCAAAATCCCTTATCATGTGTACATGACAAAAATGGCGAAGTCAGCTGGAGACATGTTAGAGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR TCA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCAGAGGCCACTTATACGTaGTTTGTCCACCACCTTTGC +
Preference number: 4 (lower is better)
Translates to: CRLTNFASITCPHNGSYSEATYT*FVHHLC
Trigger: GCAAAGGTGGTGGACAAATCACGTATAAGTGGCCTC...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAAATACGGCTTCTTTCTaGACAGTGCTAAAACCTATG +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLANTASF*TVLKPM
Trigger: CATAGGTTTTAGCACTGTTCAGAAAGAAGCCGTATT...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATGCCACCACTCCTCGTaGAACGAACTACATGGTATT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKCHHSS*NELHGI
Trigger: AATACCATGTAGTTCGTTTCACGAGGAGTGGTGGCA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000637906.1
CDS-3UTR TCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCCTCTGGCAATTGGACTaGCTTCTCAGGAAAGCGCTA +
Preference number: 4 (lower is better)
Translates to: CNNIISVHENFPMIASMPLWQLD*LLRKAL
Trigger: TAGCGCTTTCCTGAGAAGTCAGTCCAATTGCCAGAG...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGCAGAAAGGGGCTTTTTaGATGTGTTCCTACACAAGT +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMQKGAF*MCSYTS
Trigger: ACTTGTGTAGGAACACATTCAAAAAGCCCCTTTCTG...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp ATATTATACTTCAAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACTGCTTCCAGAAGTCATaGAAGTGGTCTGAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: ILYFKGHLCSFKHSSCLHCFQKS*KWSEEV
Trigger: GACTTCTTCAGACCACTTTCATGACTTCTGGAAGCA...GTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTTGAAGTATAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR TCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATCAGTCCATTCCTCTaGAGGGTTTTAAATGACAGA +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAISPFL*RVLNDR
Trigger: TCTGTCATTTAAAACCCTTCAGAGGAATGGACTGAT...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATGCTTCAAAGGCCCCTaGTCCCAAATTAATGACCAG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKCFKGP*SQINDQ
Trigger: CTGGTCATTAATTTGGGATCAGGGGCCTTTGAAGCA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAACTGATATTGTCACCTaGCGCAGATTCCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKTDIVT*RRFLVT
Trigger: AGTCACCAGGAATCTGCGTCAGGTGACAATATCAGT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405472.7
ENST00000625672.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAAGAATCCCATCCACTaGTATTGTCACCTGACGCAG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKKNPIH*YCHLTQ
Trigger: CTGCGTCAGGTGACAATATCAGTGGATGGGATTCTT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000405472.7
ENST00000625672.2
CDS-3UTR TCA 90 bp ATATTATACTTCAAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACCTGGGGTTTCAAAGGTaGTTGGGTCTAAAGTTGCAA +
Preference number: 4 (lower is better)
Translates to: ILYFKGHLCSFKHSSCLHLGFQR*LGLKLQ
Trigger: TTGCAACTTTAGACCCAATCACCTTTGAAACCCCAG...GTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTTGAAGTATAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR TCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCTGTACGGAAATCAAATaGTATGGAGCCAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: SMKQITPFVINTLAQPSSCTEIK*YGASFL
Trigger: AAGAAAACTGGCTCCATATCATTTGATTTCCGTACA...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCATGCTTGGCATCTTTCTaGTGTCTTGGCTTGCCATGG +
Preference number: 4 (lower is better)
Translates to: SYYVTELDFESNIILQRPCLASF*CLGLPW
Trigger: CCATGGCAAGCCAAGACATCAGAAAGATGCCAAGCA...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR TCA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCGAGTACGCAACGTGTTaGCAGAAATGGTACCTGACC +
Preference number: 4 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSIEYATC*QKWYLT
Trigger: GGTCAGGTACCATTTCTGTCAACACGTTGCGTACTC...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTTTGCTGTTTCCTTTaGGCAGGAAGGCTTCACTCC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKFCCFL*AGRLHS
Trigger: GGAGTGAAGCCTTCCTGCTCAAAGGAAACAGCAAAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AATGACTGCAGGTCAAGGATTCCAATAAGGAAACAGAAGGTTGCAGATGTTAGAATGACTACGGGGAGCTaGATTTTCATAAACATGCTC +
Preference number: 4 (lower is better)
Translates to: NDCRSRIPIRKQKVADVRMTTGS*IFINML
Trigger: GAGCATGTTTATGAAAATTCAGCTCCCCGTAGTCAT...TCTAACATCTGCAACCTTCTGTTTCCTTATTGGAATCCTTGACCTGCAGTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR TCA 90 bp AATGACTGCAGGTCAAGGATTCCAATAAGGAAACAGAAGGTTGCAGATGTTAGAGCCACTCGTTATCATTaGGGTTATAGCCAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: NDCRSRIPIRKQKVADVRATRYH*GYSQQK
Trigger: TTTTTGCTGGCTATAACCTCAATGATAACGAGTGGC...TCTAACATCTGCAACCTTCTGTTTCCTTATTGGAATCCTTGACCTGCAGTCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR TCA 90 bp AATGACTGCAGGTCAAGGATTCCAATAAGGAAACAGAAGGTTGCAGATGTTAGAGCCACTGATTGTCATTaGGAGGTTTATTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: NDCRSRIPIRKQKVADVRATDCH*EVYLSF
Trigger: GAAGCTCAAATAAACCTCTCAATGACAATCAGTGGC...TCTAACATCTGCAACCTTCTGTTTCCTTATTGGAATCCTTGACCTGCAGTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR TCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGGCCACTGATTGTCATTaGGAGGTTTATTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMATDCH*EVYLSF
Trigger: GAAGCTCAAATAAACCTCTCAATGACAATCAGTGGC...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCGTTGCTGGTGTCCCTTaGTATCATCACGTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSIVAGVP*YHHVVP
Trigger: TGGCACAACGTGATGATATCAAGGGACACCAGCAAC...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AATGACTGCAGGTCAAGGATTCCAATAAGGAAACAGAAGGTTGCAGATGTTAGATATATAAGTCACTCTTaGGGTCTAAGTTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: NDCRSRIPIRKQKVADVRYISHS*GLSSWL
Trigger: GAGCCAGGAACTTAGACCTCAAGAGTGACTTATATA...TCTAACATCTGCAACCTTCTGTTTCCTTATTGGAATCCTTGACCTGCAGTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAACCTTGATTGGAACATaGGTCCTCTTGGCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKTLIGT*VLLAGC
Trigger: ACAACCTGCCAAGAGGACTCATGTTCCAATCAAGGT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATGCAAGCACACACCTTaGTTGGAACATGAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKCKHTP*LEHESS
Trigger: AGAGGACTCATGTTCCAATCAAGGTGTGTGCTTGCA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATGCAGAGTGGTCCACTaGAGGAAGTCATACTACAGT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKCRVVH*RKSYYS
Trigger: ACTGTAGTATGACTTCCTTCAGTGGACCACTCTGCA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCTCAAAGCGAATTTCCTaGGGTCTATGGATAAGGCGA +
Preference number: 4 (lower is better)
Translates to: SFQLQQPELRCRLTNFASSKRIS*GLWIRR
Trigger: TCGCCTTATCCATAGACCTCAGGAAATTCGCTTTGA...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR TCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCTTGGTTGTGTGTTGGTaGTGCATTTTGGTTTTATCT +
Preference number: 4 (lower is better)
Translates to: SMKQITPFVINTLAQPSSLVVCW*CILVLS
Trigger: AGATAAAACCAAAATGCATCACCAACACACAACCAA...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAATCCTTGGATGCTTGTaGATGCCTCAAGTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKILGCL*MPQVCL
Trigger: GAGACAGACTTGAGGCATTCACAAGCATCCAAGGAT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
CDS-3UTR TCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATGTATGTGGGAATGTaGGTATTTCAGGGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAMYVGM*VFQGEK
Trigger: CTTTTCTCCCTGAAATACTCACATTCCCACATACAT...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGTATGTGGGAATGTaGGTATTTCAGGGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEMYVGM*VFQGEK
Trigger: CTTTTCTCCCTGAAATACTCACATTCCCACATACAT...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATCTTCCAGCATATCTaGTGGATTGCTGTGGATTCG +
Preference number: 4 (lower is better)
Translates to: SFQLQQPELRCRLTNFASIFQHI*WIAVDS
Trigger: CGAATCCACAGCAATCCATCAGATATGCTGGAAGAT...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTCTGATATGTTTGGTATaGAGATACTTGGGATTCAAG +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTLICLV*RYLGFK
Trigger: CTTGAATCCCAAGTATCTTCATACCAAACATATCAG...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGCTATGCAGGGAACCCTaGTATGTTTGGTATGAAGAT +
Preference number: 4 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTELCREP*YVWYED
Trigger: ATCTTCATACCAAACATATCAGGGTTCCCTGCATAG...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCGCAACTAATACTGTATaGGTTTATGGTTTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: SMKQITPFVINTLAQPSSATNTV*VYGFWH
Trigger: ATGCCAGAAACCATAAACTCATACAGTATTAGTTGC...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp CCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATGTTTTCAGCCTCCAGACGTTTaGGAAATAAGTTTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: PVSQHFHSVIHSNLPKCFQPPDV*EISFCY
Trigger: GTAACAGAAACTTATTTCTCAAACGTCTGGAGGCTG...AAAACATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR TCA 90 bp AAATGTCCATTTGACTCTTTAAAATGGACAGTTGAAACCACCGCCCCCAAACAACAGCCTCCAGACGTTTaGGAAATAAGTTTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: KCPFDSLKWTVETTAPKQQPPDV*EISFCY
Trigger: GTAACAGAAACTTATTTCTCAAACGTCTGGAGGCTG...TTGTTTGGGGGCGGTGGTTTCAACTGTCCATTTTAAAGAGTCAAATGGACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGGCCTAGGGAATGTTTaGATGCCAAGGCATTTTTGC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKGLGNV*MPRHFC
Trigger: GCAAAAATGCCTTGGCATTCAAACATTCCCTAGGCC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000630656.1
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACAGCTGAGAAGAAGATaGAGACGAAGGAGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKQLRRR*RRRSKG
Trigger: TCCCTTACTCCTTCGTCTGCATCTTCTTCTCAGCTG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000628364.2
CDS-3UTR GCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGGGCATCGTTTTCGGCTaGCATATTCAGAACTTTCAA +
Preference number: 4 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTEGIVFG*HIQNFQ
Trigger: TTGAAAGTTCTGAATATGGCAGCCGAAAACGATGCC...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGGGCATCGTTTTCGGCTaGCATATTCAGAACTTTCAA +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMGIVFG*HIQNFQ
Trigger: TTGAAAGTTCTGAATATGGCAGCCGAAAACGATGCC...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
ENST00000637906.1
CDS-3UTR GCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGATTGGTTTTTGTGTTGTaGCTTGATGCTGTAGTACTC +
Preference number: 4 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGLVFVL*LDAVVL
Trigger: GAGTACTACAGCATCAAGGCACAACACAAAAACCAA...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTATTGGTTTTTGTGTTGTaGCTTGATGCTGTAGTACTC +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLLVFVL*LDAVVL
Trigger: GAGTACTACAGCATCAAGGCACAACACAAAAACCAA...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
CDS-3UTR GCA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTAAACTCTTAAAGGTTTaGAGGTTGAGTCACTCAAAA +
Preference number: 4 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSKLLKV*RLSHSK
Trigger: TTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATAAACTCTTAAAGGTTTaGAGGTTGAGTCACTCAAAA +
Preference number: 4 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHKLLKV*RLSHSK
Trigger: TTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTAAATTTCCCAATGATTaGATCTATGCCCTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCKFPND*IYALLF
Trigger: AAACAAGAGGGCATAGATGCAATCATTGGGAAATTT...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATAAATTTCCCAATGATTaGATCTATGCCCTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHKFPND*IYALLF
Trigger: AAACAAGAGGGCATAGATGCAATCATTGGGAAATTT...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp CCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGCCGGCTGTGCTGGGACTaGCTCCAACATAGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: PKTQQIPILYKVTIHNYSRLCWD*LQHRKS
Trigger: ACTTTTTCTATGTTGGAGGCAGTCCCAGCACAGCCG...GCTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000625891.2
ENST00000628515.2
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAACCCATCCCTGCACATaGCATTGTTTTTGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKTHPCT*HCFCKG
Trigger: ACCCTTGCAAAAACAATGGCATGTGCAGGGATGGGT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAATAGCTCAAAACCGTTaGCTCTCTCTCACAGGACCT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKIAQNR*LSLTGP
Trigger: AGGTCCTGTGAGAGAGAGGCAACGGTTTTGAGCTAT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCATGGTTGCCATCAGAATaGCATATGCACGCTGGGATC +
Preference number: 4 (lower is better)
Translates to: SYYVTELDFESNIILQRPWLPSE*HMHAGI
Trigger: GATCCCAGCGTGCATATGGCATTCTGATGGCAACCA...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR GCA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCTGGTTGCCATCAGAATaGCATATGCACGCTGGGATC +
Preference number: 4 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSIWLPSE*HMHAGI
Trigger: GATCCCAGCGTGCATATGGCATTCTGATGGCAACCA...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAACTACACGCACTGTGTaGCACTCGTTATCATTGAGG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKTTRTV*HSLSLR
Trigger: CCTCAATGATAACGAGTGGCACACAGTGCGTGTAGT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAACCTAGTATGATCACCTaGCATTTGACCTGTCATGGC +
Preference number: 4 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKPSMIT*HLTCHG
Trigger: GCCATGACAGGTCAAATGGCAGGTGATCATACTAGG...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACCTAGTATGATCACCTaGCATTTGACCTGTCATGGC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKPSMIT*HLTCHG
Trigger: GCCATGACAGGTCAAATGGCAGGTGATCATACTAGG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGAAGGTGACAGGATCTaGTATGATGTTCCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKEGDRI*YDVPEA
Trigger: GGCTTCAGGAACATCATAGCAGATCCTGTCACCTTC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGCTCCGGCGGTGATTTaGGTTGTGATTTTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKAPAVI*VVIFVS
Trigger: TGACACAAAAATCACAACGCAAATCACCGCCGGAGC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATCTCGATCTGTCCGTTaGAGAAAAGAGCATCGGAGA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKSRSVR*RKEHRR
Trigger: TCTCCGATGCTCTTTTCTGCAACGGACAGATCGAGA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCATGCAAGTTTTCACAGTaGCATCTCATATCCATGTCT +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLACKFSQ*HLISMS
Trigger: AGACATGGATATGAGATGGCACTGTGAAAACTTGCA...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378262.7
ENST00000412315.5
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACCAGAGCCTGAAGCATaGATCGGTCAAAGCGAATTT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKPEPEA*IGQSEF
Trigger: AAATTCGCTTTGACCGATGCATGCTTCAGGCTCTGG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAGGGCCAAGCTAAGATaGCAGCACATCAATTGGTTG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKRAKLR*QHINWL
Trigger: CAACCAATTGATGTGCTGGCATCTTAGCTTGGCCCT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGGAGAAAGGGATGCTTaGCTCTTTAGGGCACCATTT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKGERDA*LFRAPF
Trigger: AAATGGTGCCCTAAAGAGGCAAGCATCCCTTTCTCC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
CDS-3UTR GCA 90 bp GATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACGGAGAAAGGGATGCTTaGCTCTTTAGGGCACCATTT +
Preference number: 4 (lower is better)
Translates to: DFSNWKLCTSQTNSLYSNGERDA*LFRAPF
Trigger: AAATGGTGCCCTAAAGAGGCAAGCATCCCTTTCTCC...GTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAGACCAAAGGGAGGATaGACTTTGGAGACAACGTTC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKRPKGG*TLETTF
Trigger: GAACGTTGTCTCCAAAGTGCATCCTCCCTTTGGTCT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
CDS-3UTR GCA 90 bp GATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACAGACCAAAGGGAGGATaGACTTTGGAGACAACGTTC +
Preference number: 4 (lower is better)
Translates to: DFSNWKLCTSQTNSLYSNRPKGG*TLETTF
Trigger: GAACGTTGTCTCCAAAGTGCATCCTCCCTTTGGTCT...GTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGGAGTGAGAGGGATGTaGCCTCCTTTATCTAGTTCT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKGVRGM*PPLSSS
Trigger: AGAACTAGATAAAGGAGGGCACATCCCTCTCACTCC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp GATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACGGAGTGAGAGGGATGTaGCCTCCTTTATCTAGTTCT +
Preference number: 4 (lower is better)
Translates to: DFSNWKLCTSQTNSLYSNGVRGM*PPLSSS
Trigger: AGAACTAGATAAAGGAGGGCACATCCCTCTCACTCC...GTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR GCA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAAGGAGTGAGAGGGATGTaGCCTCCTTTATCTAGTTCT +
Preference number: 4 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKGVRGM*PPLSSS
Trigger: AGAACTAGATAAAGGAGGGCACATCCCTCTCACTCC...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCTTTGCTTCCATAACCTaGCCACATAATGGTTCTTAT +
Preference number: 4 (lower is better)
Translates to: SMKQITPFVINTLAQPSSFASIT*PHNGSY
Trigger: ATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAA...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCGAAAGACAAGCTTTCTaGCCTCATAGAGCTTACACT +
Preference number: 4 (lower is better)
Translates to: FTLYQSHSTSILSFILTCERQAF*PHRAYT
Trigger: AGTGTAAGCTCTATGAGGGCAGAAAGCTTGTCTTTC...GCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR GCA 90 bp GTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACACAGGACAGTAACTGGAAGTTGTaGACTTCACAGACAAATTCG +
Preference number: 4 (lower is better)
Translates to: VTGSCALHRQIRYIATQDSNWKL*TSQTNS
Trigger: CGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACT...GTCCTGTGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp CCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATGTTTTAAGGGGATCCAGTATTaGAAGAGTAGAGGTAACACA +
Preference number: 4 (lower is better)
Translates to: PVSQHFHSVIHSNLPKCFKGIQY*KSRGNT
Trigger: TGTGTTACCTCTACTCTTGCAATACTGGATCCCCTT...AAAACATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR GCA 90 bp AAATGTCCATTTGACTCTTTAAAATGGACAGTTGAAACCACCGCCCCCAAACAAAAGGGGATCCAGTATTaGAAGAGTAGAGGTAACACA +
Preference number: 4 (lower is better)
Translates to: KCPFDSLKWTVETTAPKQKGIQY*KSRGNT
Trigger: TGTGTTACCTCTACTCTTGCAATACTGGATCCCCTT...TTGTTTGGGGGCGGTGGTTTCAACTGTCCATTTTAAAGAGTCAAATGGACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CCA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCATTATTATGGTTGCTTaGCTATTGAAGATTGTGAGC +
Preference number: 4 (lower is better)
Translates to: TSQESASTLAKSRIIGSFIIMVA*LLKIVS
Trigger: GCTCACAATCTTCAATAGCCAAGCAACCATAATAAT...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCAATTATTATGGTTGCTTaGCTATTGAAGATTGTGAGC +
Preference number: 4 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSIIMVA*LLKIVS
Trigger: GCTCACAATCTTCAATAGCCAAGCAACCATAATAAT...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGTCACATTTCCCACTATaGCGATGTTGGCATCGTTTT +
Preference number: 4 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTESHFPL*RCWHRF
Trigger: AAAACGATGCCAACATCGCCATAGTGGGAAATGTGA...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACTGATTGCATGGCAGTaGCTGTTGACTCAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKLIAWQ*LLTQLS
Trigger: TGACAACTGAGTCAACAGCCACTGCCATGCAATCAG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000637906.1
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAACATCTCTGATTGCATaGCAGTGGCTGTTGACTCAG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKTSLIA*QWLLTQ
Trigger: CTGAGTCAACAGCCACTGCCATGCAATCAGAGATGT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000637906.1
CDS-3UTR CCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGAGCTTTTCGCACTGCTaGGTTGTTTCTCCTTTACAA +
Preference number: 4 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTESFSHC*VVSPLQ
Trigger: TTGTAAAGGAGAAACAACCCAGCAGTGCGAAAAGCT...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp ATATTATACTTCAAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACCATCAGACCCCAGCATaGTATAATCTTCTTGCGTGT +
Preference number: 4 (lower is better)
Translates to: ILYFKGHLCSFKHSSCLHHQTPA*YNLLAC
Trigger: ACACGCAAGAAGATTATACCATGCTGGGGTCTGATG...GTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTTGAAGTATAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGAATGCCACCACTCCATaGATCTTCATCTTAGGATCT +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMNATTP*IFILGS
Trigger: AGATCCTAAGATGAAGATCCATGGAGTGGTGGCATT...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGAGAGATGAAAGACTCTaGGGTTTCAAAGGTGATTGG +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMRDERL*GFKGDW
Trigger: CCAATCACCTTTGAAACCCCAGAGTCTTTCATCTCT...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATGGAAATCAAATGATATaGAGCCAGTTTTCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHGNQMI*SQFSLH
Trigger: ATGCAAAGAAAACTGGCTCCATATCATTTGATTTCC...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTGGAAATCAAATGATATaGAGCCAGTTTTCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCGNQMI*SQFSLH
Trigger: ATGCAAAGAAAACTGGCTCCATATCATTTGATTTCC...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp ATATTATACTTCAAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACTCATCTGTGGGTGCTTaGCATCTTTCTGATGTCTTG +
Preference number: 4 (lower is better)
Translates to: ILYFKGHLCSFKHSSCLHSSVGA*HLSDVL
Trigger: CAAGACATCAGAAAGATGCCAAGCACCCACAGATGA...GTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTTGAAGTATAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CCA 90 bp ATATTATACTTCAAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACCACCTTTATCATCTGTaGGTGCTTGGCATCTTTCTG +
Preference number: 4 (lower is better)
Translates to: ILYFKGHLCSFKHSSCLHHLYHL*VLGIFL
Trigger: CAGAAAGATGCCAAGCACCCACAGATGATAAAGGTG...GTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTTGAAGTATAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACAGTGTGGAGGTTGCTaGTGTCCCTTGATATCATCA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKQCGGC*CPLISS
Trigger: TGATGATATCAAGGGACACCAGCAACCTCCACACTG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAGCACACACCTTGATTaGAACATGAGTCCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKSTHLD*NMSPLG
Trigger: GCCAAGAGGACTCATGTTCCAATCAAGGTGTGTGCT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAGGGTCATTGCAGAGTaGTCCACTGAAGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKRVIAE*STEGSH
Trigger: ATGACTTCCTTCAGTGGACCACTCTGCAATGACCCT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACACAGTGCCAGCACATCAATTaGTTGTGTGTTGGTGATGCA +
Preference number: 4 (lower is better)
Translates to: LVTGSCALHRQIRYIATQCQHIN*LCVGDA
Trigger: TGCATCACCAACACACAACCAATTGATGTGCTGGCA...CTGTGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATGTCTCCTTCAGATGTaGTGTCTTACAGCAGAACGG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKCLLQM*CLTAER
Trigger: CCGTTCTGCTGTAAGACACCACATCTGAAGGAGACA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
CDS-3UTR CCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAATTGGAGACAACGTTCTaGAAAAGGCTTCAACAAAAG +
Preference number: 4 (lower is better)
Translates to: AVVLLCFMNACGHHCLLELETTF*KRLQQK
Trigger: CTTTTGTTGAAGCCTTTTCCAGAACGTTGTCTCCAA...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp TTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACACAGAGGGAGGATGCACTTTaGAGACAACGTTCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: LVTGSCALHRQIRYIATQREDAL*RQRSGK
Trigger: TTTTCCAGAACGTTGTCTCCAAAGTGCATCCTCCCT...CTGTGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR CCA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCCTTCTTAAGGTTACCTaGGAGCAAGATCTCAATGAA +
Preference number: 4 (lower is better)
Translates to: LQQPELRCRLTNFASITCLLKVT*EQDLNE
Trigger: TTCATTGAGATCTTGCTCCCAGGTAACCTTAAGAAG...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTACTTCTTAAGGTTACCTaGGAGCAAGATCTCAATGAA +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLLLKVT*EQDLNE
Trigger: TTCATTGAGATCTTGCTCCCAGGTAACCTTAAGAAG...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp CACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCTATATGAACACTCTGTaGATGCCATGTCATAGTCAT +
Preference number: 4 (lower is better)
Translates to: HFVPVSQHFHSVIHSNLPYMNTL*MPCHSH
Trigger: ATGACTATGACATGGCATCCACAGAGTGTTCATATA...GGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CCA 90 bp CCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATGTTTTACAGATGGCACAAGGTaGGGATATTCACATAAGACA +
Preference number: 4 (lower is better)
Translates to: PVSQHFHSVIHSNLPKCFTDGTR*GYSHKT
Trigger: TGTCTTATGTGAATATCCCCACCTTGTGCCATCTGT...AAAACATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CCA 90 bp GACTTCCCAGCCTCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACTTTGACTCTTTAAAATaGACAGTTGAAACCACCGCC +
Preference number: 4 (lower is better)
Translates to: DFPASRRLRNKFLLLTSYFDSLK*TVETTA
Trigger: GGCGGTGGTTTCAACTGTCCATTTTAAAGAGTCAAA...GTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGAGGCTGGGAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CCA 90 bp GCACAGAAGGATCAACATCAACTCTGTAAGGACACATCACAAAGTGAGACCAGTCAGAGCCTTTATGAATaGGATTGCTGTCCTTATAAA +
Preference number: 4 (lower is better)
Translates to: AQKDQHQLCKDTSQSETSQSLYE*DCCPYK
Trigger: TTTATAAGGACAGCAATCCCATTCATAAAGGCTCTG...ACTGGTCTCACTTTGTGATGTGTCCTTACAGAGTTGATGTTGATCCTTCTGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR CCA 90 bp CTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTAAGGTGCTTTCATGCTaGATTGGTGACCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LSPKPNKFQSYTKLQYTTKVLSC*IGDPGR
Trigger: CCTTCCAGGGTCACCAATCCAGCATGAAAGCACCTT...AGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625891.2
CDS-3UTR CCA 90 bp TCTGAATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCTTAAGAGAACGCAGTaGATGAGATTTTGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: SEFLLHFVPVSQHFHSVILKRTQ*MRFWPQ
Trigger: TTGAGGCCAAAATCTCATCCACTGCGTTCTCTTAAG...AATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS-3UTR TCA 90 bp AATGACTGCAGGTCAAGGATTCCAATAAGGAAACAGAAGGTTGCAGATGTTAGAAATACGGCTTCTTTCTaGACAGTGCTAAAACCTATG +
Preference number: 4 (lower is better)
Translates to: NDCRSRIPIRKQKVADVRNTASF*TVLKPM
Trigger: CATAGGTTTTAGCACTGTTCAGAAAGAAGCCGTATT...TCTAACATCTGCAACCTTCTGTTTCCTTATTGGAATCCTTGACCTGCAGTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAACTGTGCTGAGTTACTaGTGTAGTTTCGACTCTCGT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKTVLSY*CSFDSR
Trigger: ACGAGAGTCGAAACTACATCAGTAACTCAGCACAGT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 15 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000412315.5
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000630656.1
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
CDS-3UTR TCA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAATACTCCTTTGCTTTATaGATGCGTGCGGTCATCACT +
Preference number: 4 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKYSFAL*MRAVIT
Trigger: AGTGATGACCGCACGCATTCATAAAGCAAAGGAGTA...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCTTTTGTGTTGTGCCTTaGTGCTGTAGTACTCCTTTG +
Preference number: 4 (lower is better)
Translates to: SFQLQQPELRCRLTNFASFCVVP*CCSTPL
Trigger: CAAAGGAGTACTACAGCATCAAGGCACAACACAAAA...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCATGCTTCAAAGGCCCCTaGTCCCAAATTAATGACCAG +
Preference number: 4 (lower is better)
Translates to: SYYVTELDFESNIILQRPCFKGP*SQINDQ
Trigger: CTGGTCATTAATTTGGGATCAGGGGCCTTTGAAGCA...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR TCA 90 bp CTTTCTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACTGCTTCAAAGGCCCCTaGTCCCAAATTAATGACCAG +
Preference number: 4 (lower is better)
Translates to: LSLPKTQQIPILYKVTIHCFKGP*SQINDQ
Trigger: CTGGTCATTAATTTGGGATCAGGGGCCTTTGAAGCA...GTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000625891.2
ENST00000628515.2
CDS-3UTR TCA 90 bp CCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGACTGATATTGTCACCTaGCGCAGATTCCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: PQNPTNSNLIQSYNTQLQTDIVT*RRFLVT
Trigger: AGTCACCAGGAATCTGCGTCAGGTGACAATATCAGT...CTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000625891.2
ENST00000628515.2
CDS-3UTR TCA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCAAAGAATCCCATCCACTaGTATTGTCACCTGACGCAG +
Preference number: 4 (lower is better)
Translates to: SYYVTELDFESNIILQRPKNPIH*YCHLTQ
Trigger: CTGCGTCAGGTGACAATATCAGTGGATGGGATTCTT...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR TCA 90 bp CCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGCAAGAATCCCATCCACTaGTATTGTCACCTGACGCAG +
Preference number: 4 (lower is better)
Translates to: PKTQQIPILYKVTIHNYSKNPIH*YCHLTQ
Trigger: CTGCGTCAGGTGACAATATCAGTGGATGGGATTCTT...GCTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625891.2
ENST00000628515.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACTGGGGTTTCAAAGGTaGTTGGGTCTAAAGTTGCAA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKLGFQR*LGLKLQ
Trigger: TTGCAACTTTAGACCCAATCACCTTTGAAACCCCAG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACAAAAGCATTCTGTGTACGGAAATCAAATaGTATGGAGCCAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: KGHLCSFKHSSCLHKSILCTEIK*YGASFL
Trigger: AAGAAAACTGGCTCCATATCATTTGATTTCCGTACA...CAGAATGCTTTTGTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR TCA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCATTTTGCTGTTTCCTTTaGGCAGGAAGGCTTCACTCC +
Preference number: 4 (lower is better)
Translates to: SYYVTELDFESNIILQRPFCCFL*AGRLHS
Trigger: GGAGTGAAGCCTTCCTGCTCAAAGGAAACAGCAAAA...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR TCA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCTATATAAGTCACTCTTaGGGTCTAAGTTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SFQLQQPELRCRLTNFASYISHS*GLSSWL
Trigger: GAGCCAGGAACTTAGACCTCAAGAGTGACTTATATA...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCAACCTTGATTGGAACATaGGTCCTCTTGGCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: CRLTNFASITCPHNGSYSTLIGT*VLLAGC
Trigger: ACAACCTGCCAAGAGGACTCATGTTCCAATCAAGGT...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATCAAAGCGAATTTCCTaGGGTCTATGGATAAGGCGA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKSKRIS*GLWIRR
Trigger: TCGCCTTATCCATAGACCTCAGGAAATTCGCTTTGA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
CDS-3UTR TCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCATTGGTTGTGTGTTGGTaGTGCATTTTGGTTTTATCT +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLALVVCW*CILVLS
Trigger: AGATAAAACCAAAATGCATCACCAACACACAACCAA...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR TCA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCATCCTTGGATGCTTGTaGATGCCTCAAGTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSIILGCL*MPQVCL
Trigger: GAGACAGACTTGAGGCATTCACAAGCATCCAAGGAT...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401669.7
ENST00000406316.6
CDS-3UTR TCA 90 bp CTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTATCCTTGGATGCTTGTaGATGCCTCAAGTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: LSPKPNKFQSYTKLQYTTILGCL*MPQVCL
Trigger: GAGACAGACTTGAGGCATTCACAAGCATCCAAGGAT...AGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR TCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGATGTATGTGGGAATGTaGGTATTTCAGGGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTEMYVGM*VFQGEK
Trigger: CTTTTCTCCCTGAAATACTCACATTCCCACATACAT...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAATCTTCCAGCATATCTaGTGGATTGCTGTGGATTCG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKIFQHI*WIAVDS
Trigger: CGAATCCACAGCAATCCATCAGATATGCTGGAAGAT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGAGCAACCAATTTTTCCTaGAACATCAACTTGCAATGT +
Preference number: 4 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGATNFS*NINLQC
Trigger: ACATTGCAAGTTGATGTTTCAGGAAAAATTGGTTGC...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTAACTGGCTTTCCCTaGGTAAGACTGAATGAGACG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKLTGFP*VRLNET
Trigger: CGTCTCATTCAGTCTTACTCAGGGAAAGCCAGTTAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCTTATGCCAAGTCGTGTaGAATCCTCAATCAACTGCA +
Preference number: 4 (lower is better)
Translates to: SFQLQQPELRCRLTNFASLCQVV*NPQSTA
Trigger: TGCAGTTGATTGAGGATTTCACACGACTTGGCATAA...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TCTGAATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTTTCATGAAGACTATTTaGATCCATCTACCCACAACC +
Preference number: 4 (lower is better)
Translates to: SEFLLHFVPVSQHFHSVIFMKTI*IHLPTT
Trigger: GGTTGTGGGTAGATGGATTCAAATAGTCTTCATGAA...AATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR TCA 90 bp AAATGTCCATTTGACTCTTTAAAATGGACAGTTGAAACCACCGCCCCCAAACAATTCATGAAGACTATTTaGATCCATCTACCCACAACC +
Preference number: 4 (lower is better)
Translates to: KCPFDSLKWTVETTAPKQFMKTI*IHLPTT
Trigger: GGTTGTGGGTAGATGGATTCAAATAGTCTTCATGAA...TTGTTTGGGGGCGGTGGTTTCAACTGTCCATTTTAAAGAGTCAAATGGACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
CDS-3UTR TCA 90 bp GACTTCCCAGCCTCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACATTAACTTGTGCTCCTaGGCTATTAACCAGCTATTA +
Preference number: 4 (lower is better)
Translates to: DFPASRRLRNKFLLLTSYINLCS*AINQLL
Trigger: TAATAGCTGGTTAATAGCTCAGGAGCACAAGTTAAT...GTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGAGGCTGGGAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp GATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACTTTAAAATGGACAGTTaGAACCACCGCCCCCAAACA +
Preference number: 4 (lower is better)
Translates to: DFSNWKLCTSQTNSLYSNFKMDS*NHRPQT
Trigger: TGTTTGGGGGCGGTGGTTTCAACTGTCCATTTTAAA...GTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp TTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACACAGTTTCTCCCTTTCAAGTaGGGACACAAAGAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: LVTGSCALHRQIRYIATQFLPFK*GHKEKV
Trigger: TACCTTCTCTTTGTGTCCTCACTTGAAAGGGAGAAA...CTGTGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp TCTTTAAAATGGACAGTTGAAACCACCGCCCCCAAACAAATACATTTAAGTCATGATTTGATTAGGTCCTaGGGGCAGAGCCTTTATGAA +
Preference number: 4 (lower is better)
Translates to: SLKWTVETTAPKQIHLSHDLIRS*GQSLYE
Trigger: TTCATAAAGGCTCTGCCCTCAGGACCTAATCAAATC...ATGACTTAAATGTATTTGTTTGGGGGCGGTGGTTTCAACTGTCCATTTTAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCGCCAATTATTATGGTTaGTTGGCTATTGAAGATTGT +
Preference number: 4 (lower is better)
Translates to: SMKQITPFVINTLAQPSSANYYG*LAIEDC
Trigger: ACAATCTTCAATAGCCAAGCAACCATAATAATTGGC...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGCCAATTATTATGGTTaGTTGGCTATTGAAGATTGT +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTANYYG*LAIEDC
Trigger: ACAATCTTCAATAGCCAAGCAACCATAATAATTGGC...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCGGCATCGTTTTCGGCTaGCATATTCAGAACTTTCAA +
Preference number: 4 (lower is better)
Translates to: SFQLQQPELRCRLTNFASGIVFG*HIQNFQ
Trigger: TTGAAAGTTCTGAATATGGCAGCCGAAAACGATGCC...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTAAACTCTTAAAGGTTTaGAGGTTGAGTCACTCAAAA +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTKLLKV*RLSHSK
Trigger: TTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTAAATTTCCCAATGATTaGATCTATGCCCTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTKFPND*IYALLF
Trigger: AAACAAGAGGGCATAGATGCAATCATTGGGAAATTT...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGATCTTAGGATCTCCTTaGTTGGCAAGTCGAGATAAT +
Preference number: 4 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTEILGSP*LASRDN
Trigger: ATTATCTCGACTTGCCAAGCAAGGAGATCCTAAGAT...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCAACCCATCCCTGCACATaGCATTGTTTTTGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: SYYVTELDFESNIILQRPTHPCT*HCFCKG
Trigger: ACCCTTGCAAAAACAATGGCATGTGCAGGGATGGGT...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR GCA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCAATAGCTCAAAACCGTTaGCTCTCTCTCACAGGACCT +
Preference number: 4 (lower is better)
Translates to: SYYVTELDFESNIILQRPIAQNR*LSLTGP
Trigger: AGGTCCTGTGAGAGAGAGGCAACGGTTTTGAGCTAT...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR GCA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCAACTACACGCACTGTGTaGCACTCGTTATCATTGAGG +
Preference number: 4 (lower is better)
Translates to: SYYVTELDFESNIILQRPTTRTV*HSLSLR
Trigger: CCTCAATGATAACGAGTGGCACACAGTGCGTGTAGT...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR GCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCACTACACGCACTGTGTaGCACTCGTTATCATTGAGG +
Preference number: 4 (lower is better)
Translates to: CNNIISVHENFPMIASMPTTRTV*HSLSLR
Trigger: CCTCAATGATAACGAGTGGCACACAGTGCGTGTAGT...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGTTAAATGTCAAGCTCTaGAGGTGTCCAATGAAGTTG +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMLNVKL*RCPMKL
Trigger: CAACTTCATTGGACACCTGCAGAGCTTGACATTTAA...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTACAGTGTGGAGGTTaGTGGTGTCCCTTGATATCA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKLQCGG*WCPLIS
Trigger: TGATATCAAGGGACACCAGCAACCTCCACACTGTAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCGCTCCGGCGGTGATTTaGGTTGTGATTTTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: CNNIISVHENFPMIASMPAPAVI*VVIFVS
Trigger: TGACACAAAAATCACAACGCAAATCACCGCCGGAGC...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCCCAGAGCCTGAAGCATaGATCGGTCAAAGCGAATTT +
Preference number: 4 (lower is better)
Translates to: CNNIISVHENFPMIASMPPEPEA*IGQSEF
Trigger: AAATTCGCTTTGACCGATGCATGCTTCAGGCTCTGG...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR GCA 90 bp CTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTCCAGAGCCTGAAGCATaGATCGGTCAAAGCGAATTT +
Preference number: 4 (lower is better)
Translates to: LSPKPNKFQSYTKLQYTTPEPEA*IGQSEF
Trigger: AAATTCGCTTTGACCGATGCATGCTTCAGGCTCTGG...AGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR GCA 90 bp CTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTAGGGCCAAGCTAAGATaGCAGCACATCAATTGGTTG +
Preference number: 4 (lower is better)
Translates to: LSPKPNKFQSYTKLQYTTRAKLR*QHINWL
Trigger: CAACCAATTGATGTGCTGGCATCTTAGCTTGGCCCT...AGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR GCA 90 bp GGTAATATTAGATATTACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGAGGGCCAAGCTAAGATaGCAGCACATCAATTGGTTG +
Preference number: 4 (lower is better)
Translates to: GNIRYYSSISSGGRVVSRRAKLR*QHINWL
Trigger: CAACCAATTGATGTGCTGGCATCTTAGCTTGGCCCT...CCTGGATACAACTCTTCCACCTGAACTAATTGATGAGTAATATCTAATATTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAAGCCTAATTCCTTGTaGGTGGTCTCACAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKKPNSL*VVSQVG
Trigger: TCCAACTTGTGAGACCACGCACAAGGAATTAGGCTT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
CDS-3UTR GCA 90 bp AATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTATAGCTTCAAAGGCCTaGTTCTTCTGTCATAGCATG +
Preference number: 4 (lower is better)
Translates to: NSYFTLYQSHSTSILSFIIASKA*FFCHSM
Trigger: CATGCTATGACAGAAGAAGCAGGCCTTTGAAGCTAT...AATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR GCA 90 bp GTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATGTTTTCATATAGCTTCAAAGGCCTaGTTCTTCTGTCATAGCATG +
Preference number: 4 (lower is better)
Translates to: VSQHFHSVIHSNLPKCFHIASKA*FFCHSM
Trigger: CATGCTATGACAGAAGAAGCAGGCCTTTGAAGCTAT...ATGAAAACATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR GCA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCGGAGAAAGGGATGCTTaGCTCTTTAGGGCACCATTT +
Preference number: 4 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSIGERDA*LFRAPF
Trigger: AAATGGTGCCCTAAAGAGGCAAGCATCCCTTTCTCC...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401669.7
ENST00000406316.6
CDS-3UTR GCA 90 bp CTTTCTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACGGAGAAAGGGATGCTTaGCTCTTTAGGGCACCATTT +
Preference number: 4 (lower is better)
Translates to: LSLPKTQQIPILYKVTIHGERDA*LFRAPF
Trigger: AAATGGTGCCCTAAAGAGGCAAGCATCCCTTTCTCC...GTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTGGATGCTTGTGAATaGCTCAAGTCTGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKLDACE*LKSVSF
Trigger: GAAGGAGACAGACTTGAGGCATTCACAAGCATCCAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
CDS-3UTR GCA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCAAGACCAAAGGGAGGATaGACTTTGGAGACAACGTTC +
Preference number: 4 (lower is better)
Translates to: CRLTNFASITCPHNGSYSRPKGG*TLETTF
Trigger: GAACGTTGTCTCCAAAGTGCATCCTCCCTTTGGTCT...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR GCA 90 bp CTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTAGACCAAAGGGAGGATaGACTTTGGAGACAACGTTC +
Preference number: 4 (lower is better)
Translates to: LSPKPNKFQSYTKLQYTTRPKGG*TLETTF
Trigger: GAACGTTGTCTCCAAAGTGCATCCTCCCTTTGGTCT...AGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR GCA 90 bp CTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTGGAGTGAGAGGGATGTaGCCTCCTTTATCTAGTTCT +
Preference number: 4 (lower is better)
Translates to: LSPKPNKFQSYTKLQYTTGVRGM*PPLSSS
Trigger: AGAACTAGATAAAGGAGGGCACATCCCTCTCACTCC...AGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR GCA 90 bp AGATCTACTCTTCACAAAGAGAATAAGGCTTATGCACTTTCAGAATGTGTAACTGGAGTGAGAGGGATGTaGCCTCCTTTATCTAGTTCT +
Preference number: 4 (lower is better)
Translates to: RSTLHKENKAYALSECVTGVRGM*PPLSSS
Trigger: AGAACTAGATAAAGGAGGGCACATCCCTCTCACTCC...AGTTACACATTCTGAAAGTGCATAAGCCTTATTCTCTTTGTGAAGAGTAGATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR GCA 90 bp ATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCAGCCTCCAATCAAAGTaGCAACATTCGCTGATAATT +
Preference number: 4 (lower is better)
Translates to: IPTSLCTSLTALPFCHSFSLQSK*QHSLII
Trigger: AATTATCAGCGAATGTTGGCACTTTGATTGGAGGCT...GAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR GCA 90 bp TGTTTAATTCATTGTGATTCTGCCAGCCCACAGCAGTGGTCTCTAACATGTCTCCTTTATGAATGGGATTaGTGTCCTTATAAAAGACAC +
Preference number: 4 (lower is better)
Translates to: CLIHCDSASPQQWSLTCLLYEWD*CPYKRH
Trigger: GTGTCTTTTATAAGGACAGCAATCCCATTCATAAAG...GAGACATGTTAGAGACCACTGCTGTGGGCTGGCAGAATCACAATGAATTAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
CDS-3UTR GCA 90 bp AAATGTCCATTTGACTCTTTAAAATGGACAGTTGAAACCACCGCCCCCAAACAAAGTAACTGGAAGTTGTaGACTTCACAGACAAATTCG +
Preference number: 4 (lower is better)
Translates to: KCPFDSLKWTVETTAPKQSNWKL*TSQTNS
Trigger: CGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACT...TTGTTTGGGGGCGGTGGTTTCAACTGTCCATTTTAAAGAGTCAAATGGACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAATCTTAAACCCTGCATaGTGCAGATCTAAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKILNPA*CRSKLC
Trigger: GCACAGCTTAGATCTGCAGCATGCAGGGTTTAAGAT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000630656.1
CDS-3UTR GCA 90 bp TCTGAATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTTATGTTTGCCACAGCTaGATACCACTTACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: SEFLLHFVPVSQHFHSVIYVCHS*IPLTSF
Trigger: AAAGGAAGTAAGTGGTATGCAGCTGTGGCAAACATA...AATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATTCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS-3UTR GCA 90 bp CAACAGATGGCACAAGGTGGGGATATTCACATAAGACAGACTTGGATTGATGTTGGTACCAATGTGATTTaGAAAATACTCAAGTCCATC +
Preference number: 4 (lower is better)
Translates to: QQMAQGGDIHIRQTWIDVGTNVI*KILKSI
Trigger: GATGGACTTGAGTATTTTGCAAATCACATTGGTACC...AACATCAATCCAAGTCTGTCTTATGTGAATATCCCCACCTTGTGCCATCTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS-3UTR CCA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCTCACATTTCCCACTATaGCGATGTTGGCATCGTTTT +
Preference number: 4 (lower is better)
Translates to: SFQLQQPELRCRLTNFASSHFPL*RCWHRF
Trigger: AAAACGATGCCAACATCGCCATAGTGGGAAATGTGA...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCTTCTCTGGCAATTaGACTGACTTCTCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKVFSGN*TDFSGK
Trigger: CTTTCCTGAGAAGTCAGTCCAATTGCCAGAGAAGAC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACATCAGACCCCAGCATaGTATAATCTTCTTGCGTGT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKHQTPA*YNLLAC
Trigger: ACACGCAAGAAGATTATACCATGCTGGGGTCTGATG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp ATATTATACTTCAAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACAGAGATGAAAGACTCTaGGGTTTCAAAGGTGATTGG +
Preference number: 4 (lower is better)
Translates to: ILYFKGHLCSFKHSSCLHRDERL*GFKGDW
Trigger: CCAATCACCTTTGAAACCCCAGAGTCTTTCATCTCT...GTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTTGAAGTATAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATGTCTTGGCTTGCCATaGCTAAATAAGATGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKCLGLP*LNKMRP
Trigger: TGGCCTCATCTTATTTAGCCATGGCAAGCCAAGACA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATCATCTGTGGGTGCTTaGCATCTTTCTGATGTCTTG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKSSVGA*HLSDVL
Trigger: CAAGACATCAGAAAGATGCCAAGCACCCACAGATGA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACACCTTTATCATCTGTaGGTGCTTGGCATCTTTCTG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKHLYHL*VLGIFL
Trigger: CAGAAAGATGCCAAGCACCCACAGATGATAAAGGTG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACCTGTCATGGCCTGTTaGTCATCCACTGTTAACTTT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKPVMAC*SSTVNF
Trigger: AAAGTTAACAGTGGATGACCAACAGGCCATGACAGG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCACAGTGTGGAGGTTGCTaGTGTCCCTTGATATCATCA +
Preference number: 4 (lower is better)
Translates to: CRLTNFASITCPHNGSYSQCGGC*CPLISS
Trigger: TGATGATATCAAGGGACACCAGCAACCTCCACACTG...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATCAATCTTTACAGTGTaGAGGTTGCTGGTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKSIFTV*RLLVSL
Trigger: AAGGGACACCAGCAACCTCCACACTGTAAAGATTGA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCAAGGGTCATTGCAGAGTaGTCCACTGAAGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: SYYVTELDFESNIILQRPRVIAE*STEGSH
Trigger: ATGACTTCCTTCAGTGGACCACTCTGCAATGACCCT...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATGCCAGCACATCAATTaGTTGTGTGTTGGTGATGCA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKCQHIN*LCVGDA
Trigger: TGCATCACCAACACACAACCAATTGATGTGCTGGCA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
CDS-3UTR CCA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAATGCCAGCACATCAATTaGTTGTGTGTTGGTGATGCA +
Preference number: 4 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKCQHIN*LCVGDA
Trigger: TGCATCACCAACACACAACCAATTGATGTGCTGGCA...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp TTCAGAATAAACCAAGTACATCACTGCTTACCAACAGCACCTATGGCTAACAGTCTAATTCCTTGTGCGTaGTCTCACAAGTTGGATTTT +
Preference number: 4 (lower is better)
Translates to: FRINQVHHCLPTAPMANSLIPCA*SHKLDF
Trigger: AAAATCCAACTTGTGAGACCACGCACAAGGAATTAG...ACTGTTAGCCATAGGTGCTGTTGGTAAGCAGTGATGTACTTGGTTTATTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CCA 90 bp ATATGCACCAAACACAGGCATTTCAACAGTAAGGGTCTGTCAACATTCACAAACTTGGAGACAACGTTCTaGAAAAGGCTTCAACAAAAG +
Preference number: 4 (lower is better)
Translates to: ICTKHRHFNSKGLSTFTNLETTF*KRLQQK
Trigger: CTTTTGTTGAAGCCTTTTCCAGAACGTTGTCTCCAA...GTTTGTGAATGTTGACAGACCCTTACTGTTGAAATGCCTGTGTTTGGTGCATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR CCA 90 bp ATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTTGGAGACAACGTTCTaGAAAAGGCTTCAACAAAAG +
Preference number: 4 (lower is better)
Translates to: IPTSLCTSLTALPFCHSFLETTF*KRLQQK
Trigger: CTTTTGTTGAAGCCTTTTCCAGAACGTTGTCTCCAA...GAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAGGGAGGATGCACTTTaGAGACAACGTTCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKREDAL*RQRSGK
Trigger: TTTTCCAGAACGTTGTCTCCAAAGTGCATCCTCCCT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATATTCTTCTTTTCCTTaGTCGCCCATCATCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKYSSFP*SPIIRC
Trigger: GCACCTGATGATGGGCGACCAAGGAAAAGAAGAATA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000405472.7
CDS-3UTR CCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGCTTCTTAAGGTTACCTaGGAGCAAGATCTCAATGAA +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMLLKVT*EQDLNE
Trigger: TTCATTGAGATCTTGCTCCCAGGTAACCTTAAGAAG...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCTGGTATGAAGATACTTaGGATTCAAGTCATTTTCTC +
Preference number: 4 (lower is better)
Translates to: SMKQITPFVINTLAQPSSWYEDT*DSSHFL
Trigger: GAGAAAATGACTTGAATCCCAAGTATCTTCATACCA...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGAAGGGTAGGGTTATGTaGCCTTTCTTTGATGTCTTA +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMKGRVM*PFFDVL
Trigger: TAAGACATCAAAGAAAGGCCACATAACCCTACCCTT...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000636345.1
CDS-3UTR CCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGAAGGGTAGGGTTATGTaGCCTTTCTTTGATGTCTTA +
Preference number: 4 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTEKGRVM*PFFDVL
Trigger: TAAGACATCAAAGAAAGGCCACATAACCCTACCCTT...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000636345.1
CDS-3UTR CCA 90 bp TCTTTAAAATGGACAGTTGAAACCACCGCCCCCAAACAAATACATTTAAGTCATTCTTTACTTTTACCTTaGTCGCCCATCATCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SLKWTVETTAPKQIHLSHSLLLP*SPIIRC
Trigger: GCACCTGATGATGGGCGACCAAGGTAAAAGTAAAGA...ATGACTTAAATGTATTTGTTTGGGGGCGGTGGTTTCAACTGTCCATTTTAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
CDS-3UTR CCA 90 bp CAACAGATGGCACAAGGTGGGGATATTCACATAAGACAGACTTGGATTGATGTTCACATAAGACAGACTTaGATTGATGTTATGCTTTCC +
Preference number: 4 (lower is better)
Translates to: QQMAQGGDIHIRQTWIDVHIRQT*IDVMLS
Trigger: GGAAAGCATAACATCAATCCAAGTCTGTCTTATGTG...AACATCAATCCAAGTCTGTCTTATGTGAATATCCCCACCTTGTGCCATCTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CCA 90 bp GTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATGTTTTCATAACCCTGAGTTGTTATaGAGCACAGAAGGATCAACA +
Preference number: 4 (lower is better)
Translates to: VSQHFHSVIHSNLPKCFHNPELL*STEGST
Trigger: TGTTGATCCTTCTGTGCTCCATAACAACTCAGGGTT...ATGAAAACATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR CCA 90 bp ATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTTTGACTCTTTAAAATaGACAGTTGAAACCACCGCC +
Preference number: 4 (lower is better)
Translates to: IPTSLCTSLTALPFCHSFFDSLK*TVETTA
Trigger: GGCGGTGGTTTCAACTGTCCATTTTAAAGAGTCAAA...GAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
3UTR CAA 72 bp CGAACTACATGGTATTTCCCATCATTAATGATTGCATaGGATTCTTCAATGGCGATGTCATCTGTCCCAACA +
Preference number: 4 (lower is better)
Translates to: RTTWYFPSLMIA*DSSMAMSSVPT
Trigger: TGTTGGGACAGATGACATCGCCATTGAAGAATCCAATGCAATCATTAATGATGGGAAATACCATGTAGTTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637906.1
3UTR CAA 72 bp GAATGGCTAGGGCAGGTGTGCTCCAGAGCTGAATATTaGAAGATCACATATTTACAGTTCCTACACTTATTT +
Preference number: 4 (lower is better)
Translates to: EWLGQVCSRAEY*KITYLQFLHLF
Trigger: AAATAAGTGTAGGAACTGTAAATATGTGATCTTCAAATATTCAGCTCTGGAGCACACCTGCCCTAGCCATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS-3UTR TCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCACTGTGCTGAGTTACTaGTGTAGTTTCGACTCTCGT +
Preference number: 4 (lower is better)
Translates to: CNNIISVHENFPMIASMPTVLSY*CSFDSR
Trigger: ACGAGAGTCGAAACTACATCAGTAACTCAGCACAGT...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGCATAATAAGCGTGCATaGAAATTTCCCAATGATTGC +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMHNKRA*KFPNDC
Trigger: GCAATCATTGGGAAATTTTCATGCACGCTTATTATG...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp CCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGCTGCTTCCAGAAGTCATaGAAGTGGTCTGAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: PKTQQIPILYKVTIHNYSCFQKS*KWSEEV
Trigger: GACTTCTTCAGACCACTTTCATGACTTCTGGAAGCA...GCTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625891.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTTTCAGGGCAAGATTaGCATAATCAGCCGATTTCC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKFSGQD*HNQPIS
Trigger: GGAAATCGGCTGATTATGTCAATCTTGCCCTGAAAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGTGTACGGAAATCAAATaGTATGGAGCCAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMCTEIK*YGASFL
Trigger: AAGAAAACTGGCTCCATATCATTTGATTTCCGTACA...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGTGTACGGAAATCAAATaGTATGGAGCCAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTECTEIK*YGASFL
Trigger: AAGAAAACTGGCTCCATATCATTTGATTTCCGTACA...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAATGACTACGGGGAGCTaGATTTTCATAAACATGCTC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKMTTGS*IFINML
Trigger: GAGCATGTTTATGAAAATTCAGCTCCCCGTAGTCAT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGCCACTCGTTATCATTaGGGTTATAGCCAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKATRYH*GYSQQK
Trigger: TTTTTGCTGGCTATAACCTCAATGATAACGAGTGGC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAAGCCACTCGTTATCATTaGGGTTATAGCCAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKATRYH*GYSQQK
Trigger: TTTTTGCTGGCTATAACCTCAATGATAACGAGTGGC...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGCCACTGATTGTCATTaGGAGGTTTATTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKATDCH*EVYLSF
Trigger: GAAGCTCAAATAAACCTCTCAATGACAATCAGTGGC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATATATAAGTCACTCTTaGGGTCTAAGTTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKYISHS*GLSSWL
Trigger: GAGCCAGGAACTTAGACCTCAAGAGTGACTTATATA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp CTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTTCAAAGCGAATTTCCTaGGGTCTATGGATAAGGCGA +
Preference number: 4 (lower is better)
Translates to: LSPKPNKFQSYTKLQYTTSKRIS*GLWIRR
Trigger: TCGCCTTATCCATAGACCTCAGGAAATTCGCTTTGA...AGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR TCA 90 bp ATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTTGGTTGTGTGTTGGTaGTGCATTTTGGTTTTATCT +
Preference number: 4 (lower is better)
Translates to: IPTSLCTSLTALPFCHSFLVVCW*CILVLS
Trigger: AGATAAAACCAAAATGCATCACCAACACACAACCAA...GAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR TCA 90 bp TTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATTGGTTGTGTGTTGGTaGTGCATTTTGGTTTTATCT +
Preference number: 4 (lower is better)
Translates to: FVPVSQHFHSVIHSNLPKLVVCW*CILVLS
Trigger: AGATAAAACCAAAATGCATCACCAACACACAACCAA...TTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR TCA 90 bp GGTAATATTAGATATTACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGGTGTTTAATTCATTGTaGTTCTGCCAGCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: GNIRYYSSISSGGRVVSRVFNSL*FCQPTA
Trigger: TGCTGTGGGCTGGCAGAATCACAATGAATTAAACAC...CCTGGATACAACTCTTCCACCTGAACTAATTGATGAGTAATATCTAATATTACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
CDS-3UTR TCA 90 bp ATATGCACCAAACACAGGCATTTCAACAGTAAGGGTCTGTCAACATTCACAAACATTAACTTGTGCTCCTaGGCTATTAACCAGCTATTA +
Preference number: 4 (lower is better)
Translates to: ICTKHRHFNSKGLSTFTNINLCS*AINQLL
Trigger: TAATAGCTGGTTAATAGCTCAGGAGCACAAGTTAAT...GTTTGTGAATGTTGACAGACCCTTACTGTTGAAATGCCTGTGTTTGGTGCATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp AAATGTCCATTTGACTCTTTAAAATGGACAGTTGAAACCACCGCCCCCAAACAAATTAACTTGTGCTCCTaGGCTATTAACCAGCTATTA +
Preference number: 4 (lower is better)
Translates to: KCPFDSLKWTVETTAPKQINLCS*AINQLL
Trigger: TAATAGCTGGTTAATAGCTCAGGAGCACAAGTTAAT...TTGTTTGGGGGCGGTGGTTTCAACTGTCCATTTTAAAGAGTCAAATGGACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp AAATGTCCATTTGACTCTTTAAAATGGACAGTTGAAACCACCGCCCCCAAACAAGCTCTTCTAGTAACATaGGAAGCCTGGATAATTAAA +
Preference number: 4 (lower is better)
Translates to: KCPFDSLKWTVETTAPKQALLVT*EAWIIK
Trigger: TTTAATTATCCAGGCTTCTCATGTTACTAGAAGAGC...TTGTTTGGGGGCGGTGGTTTCAACTGTCCATTTTAAAGAGTCAAATGGACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp ATATGCACCAAACACAGGCATTTCAACAGTAAGGGTCTGTCAACATTCACAAACGCTCTTCTAGTAACATaGGAAGCCTGGATAATTAAA +
Preference number: 4 (lower is better)
Translates to: ICTKHRHFNSKGLSTFTNALLVT*EAWIIK
Trigger: TTTAATTATCCAGGCTTCTCATGTTACTAGAAGAGC...GTTTGTGAATGTTGACAGACCCTTACTGTTGAAATGCCTGTGTTTGGTGCATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR TCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGGGCTTAAAGGACCACTaGAAAGTAGTTTTTAATCCT +
Preference number: 4 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTEGLKDH*KVVFNP
Trigger: AGGATTAAAAACTACTTTTCAGTGGTCCTTTAAGCC...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635519.1
CDS-3UTR GCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAGCCAATTATTATGGTTaGTTGGCTATTGAAGATTGT +
Preference number: 4 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEANYYG*LAIEDC
Trigger: ACAATCTTCAATAGCCAAGCAACCATAATAATTGGC...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
ENST00000637906.1
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGGCATCGTTTTCGGCTaGCATATTCAGAACTTTCAA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKGIVFG*HIQNFQ
Trigger: TTGAAAGTTCTGAATATGGCAGCCGAAAACGATGCC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000637906.1
CDS-3UTR GCA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCCCTTTGCTTTATGAATaGGTGCGGTCATCACTGTCT +
Preference number: 4 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSIPLLYE*VRSSLS
Trigger: AGACAGTGATGACCGCACGCATTCATAAAGCAAAGG...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCCCTTTGCTTTATGAATaGGTGCGGTCATCACTGTCT +
Preference number: 4 (lower is better)
Translates to: CNNIISVHENFPMIASMPPLLYE*VRSSLS
Trigger: AGACAGTGATGACCGCACGCATTCATAAAGCAAAGG...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCGCTGTAGTACTCCTTTaGTTTATGAATGCGTGCGGT +
Preference number: 4 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSIAVVLL*FMNACG
Trigger: ACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAAAACTCTTAAAGGTTTaGAGGTTGAGTCACTCAAAA +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAKLLKV*RLSHSK
Trigger: TTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCAAACTCTTAAAGGTTTaGAGGTTGAGTCACTCAAAA +
Preference number: 4 (lower is better)
Translates to: LQQPELRCRLTNFASITCKLLKV*RLSHSK
Trigger: TTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGATTCTCACATTTAAATaGCACCACTCCATGGATCTT +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMILTFK*HHSMDL
Trigger: AAGATCCATGGAGTGGTGGCATTTAAATGTGAGAAT...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGAACACAGGTCAATGTATaGCATTCCATTAAATGTCAA +
Preference number: 4 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGTQVNV*HSIKCQ
Trigger: TTGACATTTAATGGAATGGCATACATTGACCTGTGT...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AGATCTACTCTTCACAAAGAGAATAAGGCTTATGCACTTTCAGAATGTGTAACTAAGCCTAATTCCTTGTaGGTGGTCTCACAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: RSTLHKENKAYALSECVTKPNSL*VVSQVG
Trigger: TCCAACTTGTGAGACCACGCACAAGGAATTAGGCTT...AGTTACACATTCTGAAAGTGCATAAGCCTTATTCTCTTTGTGAAGAGTAGATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR GCA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCAAGCCTAATTCCTTGTaGGTGGTCTCACAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSIKPNSL*VVSQVG
Trigger: TCCAACTTGTGAGACCACGCACAAGGAATTAGGCTT...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401669.7
ENST00000406316.6
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAATAGCTTCAAAGGCCTaGTTCTTCTGTCATAGCATG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKIASKA*FFCHSM
Trigger: CATGCTATGACAGAAGAAGCAGGCCTTTGAAGCTAT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
CDS-3UTR GCA 90 bp CCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGTTGGATGCTTGTGAATaGCTCAAGTCTGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PQNPTNSNLIQSYNTQLQLDACE*LKSVSF
Trigger: GAAGGAGACAGACTTGAGGCATTCACAAGCATCCAA...CTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR GCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCATACATATTTCTAAGGTaGTGTATGTCTGAAATCCAG +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAYIFLR*CMSEIQ
Trigger: CTGGATTTCAGACATACAGCACCTTAGAAATATGTA...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCTACATATTTCTAAGGTaGTGTATGTCTGAAATCCAG +
Preference number: 4 (lower is better)
Translates to: LQQPELRCRLTNFASITCYIFLR*CMSEIQ
Trigger: CTGGATTTCAGACATACAGCACCTTAGAAATATGTA...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCGGTCTTCCCTTCAAATaGAGCCTTCTTTACTTTCCC +
Preference number: 4 (lower is better)
Translates to: CNNIISVHENFPMIASMPGLPFK*SLLYFP
Trigger: GGGAAAGTAAAGAAGGCTGCATTTGAAGGGAAGACC...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp CAGATGGCACAAGGTGGGGATATTCACATAAGACAGACTTGGATTGATGTTATGCTTTATGAATGGGATTaGTGTCCTTATAAAAGACAC +
Preference number: 4 (lower is better)
Translates to: QMAQGGDIHIRQTWIDVMLYEWD*CPYKRH
Trigger: GTGTCTTTTATAAGGACAGCAATCCCATTCATAAAG...CATAACATCAATCCAAGTCTGTCTTATGTGAATATCCCCACCTTGTGCCATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR GCA 90 bp GTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACACAGGACCTTTATGAATGGGATTaGTGTCCTTATAAAAGACAC +
Preference number: 4 (lower is better)
Translates to: VTGSCALHRQIRYIATQDLYEWD*CPYKRH
Trigger: GTGTCTTTTATAAGGACAGCAATCCCATTCATAAAG...GTCCTGTGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp GACTTCCCAGCCTCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACTTCTTAGTTTGTATATaGACCAAACACAGGCATTTC +
Preference number: 4 (lower is better)
Translates to: DFPASRRLRNKFLLLTSYFLVCI*TKHRHF
Trigger: GAAATGCCTGTGTTTGGTGCATATACAAACTAAGAA...GTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGAGGCTGGGAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp GTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATGTTTTCATATCAAAGAGTACACATaGCTGACTTACCAAGCAATG +
Preference number: 4 (lower is better)
Translates to: VSQHFHSVIHSNLPKCFHIKEYT*LTYQAM
Trigger: CATTGCTTGGTAAGTCAGGCATGTGTACTCTTTGAT...ATGAAAACATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACATTGGATTCTTCAATaGCGATGTCATCTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKHWILQ*RCHLSQ
Trigger: TTGGGACAGATGACATCGCCATTGAAGAATCCAATG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000637906.1
CDS-3UTR CCA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTATTATGGTTGCTTaGCTATTGAAGATTGTGAGC +
Preference number: 4 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAIIMVA*LLKIVS
Trigger: GCTCACAATCTTCAATAGCCAAGCAACCATAATAAT...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATTATTATGGTTGCTTaGCTATTGAAGATTGTGAGC +
Preference number: 4 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEIIMVA*LLKIVS
Trigger: GCTCACAATCTTCAATAGCCAAGCAACCATAATAAT...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
ENST00000637906.1
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATCACATTTCCCACTATaGCGATGTTGGCATCGTTTT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKSHFPL*RCWHRF
Trigger: AAAACGATGCCAACATCGCCATAGTGGGAAATGTGA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000637906.1
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAATGTCATCTGTGGTCTaGCTAATGGGTTCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKMSSVV*LMGSFV
Trigger: GACAAAAGAACCCATTAGCCAGACCACAGATGACAT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000637906.1
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAGCTTTTCGCACTGCTaGGTTGTTTCTCCTTTACAA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKSFSHC*VVSPLQ
Trigger: TTGTAAAGGAGAAACAACCCAGCAGTGCGAAAAGCT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 15 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000412315.5
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000630656.1
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
CDS-3UTR CCA 90 bp CCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGCCATCAGACCCCAGCATaGTATAATCTTCTTGCGTGT +
Preference number: 4 (lower is better)
Translates to: PKTQQIPILYKVTIHNYSHQTPA*YNLLAC
Trigger: ACACGCAAGAAGATTATACCATGCTGGGGTCTGATG...GCTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000625891.2
ENST00000628515.2
CDS-3UTR CCA 90 bp CTTTCTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACCATCAGACCCCAGCATaGTATAATCTTCTTGCGTGT +
Preference number: 4 (lower is better)
Translates to: LSLPKTQQIPILYKVTIHHQTPA*YNLLAC
Trigger: ACACGCAAGAAGATTATACCATGCTGGGGTCTGATG...GTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000625891.2
ENST00000628515.2
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAATGCCACCACTCCATaGATCTTCATCTTAGGATCT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKNATTP*IFILGS
Trigger: AGATCCTAAGATGAAGATCCATGGAGTGGTGGCATT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAGAGATGAAAGACTCTaGGGTTTCAAAGGTGATTGG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKRDERL*GFKGDW
Trigger: CCAATCACCTTTGAAACCCCAGAGTCTTTCATCTCT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGGAAATCAAATGATATaGAGCCAGTTTTCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLGNQMI*SQFSLH
Trigger: ATGCAAAGAAAACTGGCTCCATATCATTTGATTTCC...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCATGTCTTGGCTTGCCATaGCTAAATAAGATGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SYYVTELDFESNIILQRPCLGLP*LNKMRP
Trigger: TGGCCTCATCTTATTTAGCCATGGCAAGCCAAGACA...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACGGATATCTTTGCTTTaGCCATCGATGAACAAATCC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKRISLL*PSMNKS
Trigger: GGATTTGTTCATCGATGGCCAAAGCAAAGATATCCG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCACCTGTCATGGCCTGTTaGTCATCCACTGTTAACTTT +
Preference number: 4 (lower is better)
Translates to: SYYVTELDFESNIILQRPPVMAC*SSTVNF
Trigger: AAAGTTAACAGTGGATGACCAACAGGCCATGACAGG...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CCA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCCCTGTCATGGCCTGTTaGTCATCCACTGTTAACTTT +
Preference number: 4 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSIPVMAC*SSTVNF
Trigger: AAAGTTAACAGTGGATGACCAACAGGCCATGACAGG...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCATCAATCTTTACAGTGTaGAGGTTGCTGGTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: SYYVTELDFESNIILQRPSIFTV*RLLVSL
Trigger: AAGGGACACCAGCAACCTCCACACTGTAAAGATTGA...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CCA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCATCAATCTTTACAGTGTaGAGGTTGCTGGTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: CRLTNFASITCPHNGSYSSIFTV*RLLVSL
Trigger: AAGGGACACCAGCAACCTCCACACTGTAAAGATTGA...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp CCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGCTGCCAGCACATCAATTaGTTGTGTGTTGGTGATGCA +
Preference number: 4 (lower is better)
Translates to: PKTQQIPILYKVTIHNYSCQHIN*LCVGDA
Trigger: TGCATCACCAACACACAACCAATTGATGTGCTGGCA...GCTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGCGTGGTCTCACAAGTTaGATTTTACTTCTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTERGLTS*ILLLFS
Trigger: TGAAAAGAGAAGTAAAATCCAACTTGTGAGACCACG...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp TCTGAATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCGTGGTCTCACAAGTTaGATTTTACTTCTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: SEFLLHFVPVSQHFHSVIRGLTS*ILLLFS
Trigger: TGAAAAGAGAAGTAAAATCCAACTTGTGAGACCACG...AATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR CCA 90 bp AATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAATTCCTTGTGCGTaGTCTCACAAGTTGGATTTT +
Preference number: 4 (lower is better)
Translates to: NSYFTLYQSHSTSILSFILIPCA*SHKLDF
Trigger: AAAATCCAACTTGTGAGACCACGCACAAGGAATTAG...AATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR CCA 90 bp GGTAATATTAGATATTACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGAGGGAGGATGCACTTTaGAGACAACGTTCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: GNIRYYSSISSGGRVVSRREDAL*RQRSGK
Trigger: TTTTCCAGAACGTTGTCTCCAAAGTGCATCCTCCCT...CCTGGATACAACTCTTCCACCTGAACTAATTGATGAGTAATATCTAATATTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR CCA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAAATAGTGAATGTATGTaGGAATGTGAGTATTTCAGG +
Preference number: 4 (lower is better)
Translates to: AVVLLCFMNACGHHCLLENSECM*ECEYFR
Trigger: CCTGAAATACTCACATTCCCACATACATTCACTATT...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp TTAGATATTACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGTCTTAACTCTTTACTTTTACCTTaGTCGCCCATCATCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LDITHQLVQVEELYPGLNSLLLP*SPIIRC
Trigger: GCACCTGATGATGGGCGACCAAGGTAAAAGTAAAGA...GTTAAGACCTGGATACAACTCTTCCACCTGAACTAATTGATGAGTAATATCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
CDS-3UTR CCA 90 bp TTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAACACATAAGACAGACTTaGATTGATGTTATGCTTTCC +
Preference number: 4 (lower is better)
Translates to: FVPVSQHFHSVIHSNLPKHIRQT*IDVMLS
Trigger: GGAAAGCATAACATCAATCCAAGTCTGTCTTATGTG...TTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CCA 90 bp TTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACACAGTTTGACTCTTTAAAATaGACAGTTGAAACCACCGCC +
Preference number: 4 (lower is better)
Translates to: LVTGSCALHRQIRYIATQFDSLK*TVETTA
Trigger: GGCGGTGGTTTCAACTGTCCATTTTAAAGAGTCAAA...CTGTGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CCA 90 bp AAATGTCCATTTGACTCTTTAAAATGGACAGTTGAAACCACCGCCCCCAAACAACAGAGCCTTTATGAATaGGATTGCTGTCCTTATAAA +
Preference number: 4 (lower is better)
Translates to: KCPFDSLKWTVETTAPKQQSLYE*DCCPYK
Trigger: TTTATAAGGACAGCAATCCCATTCATAAAGGCTCTG...TTGTTTGGGGGCGGTGGTTTCAACTGTCCATTTTAAAGAGTCAAATGGACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CCA 90 bp TCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACCCAGTTTATGGTGGGTGGGGGCGAAAATaGAAACATATTGATGGATTT +
Preference number: 4 (lower is better)
Translates to: SRRLRNKFLLLTSYPVYGGWGRK*KHIDGF
Trigger: AAATCCATCAATATGTTTCCATTTTCGCCCCCACCC...ACCATAAACTGGGTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS-3UTR CCA 90 bp ACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCACAGTGGATGAGATTTTaGCCTCAAGTAAAAATGTTT +
Preference number: 4 (lower is better)
Translates to: TLYQSHSTSILSFILTCPQWMRF*PQVKMF
Trigger: AAACATTTTTACTTGAGGCCAAAATCTCATCCACTG...TGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAATACGGCTTCTTTCTaGACAGTGCTAAAACCTATG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKNTASF*TVLKPM
Trigger: CATAGGTTTTAGCACTGTTCAGAAAGAAGCCGTATT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000637906.1
CDS-3UTR TCA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCACAGAAAGGGGCTTTTTaGATGTGTTCCTACACAAGT +
Preference number: 4 (lower is better)
Translates to: CRLTNFASITCPHNGSYSQKGAF*MCSYTS
Trigger: ACTTGTGTAGGAACACATTCAAAAAGCCCCTTTCTG...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAATCAGTCCATTCCTCTaGAGGGTTTTAAATGACAGA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKISPFL*RVLNDR
Trigger: TCTGTCATTTAAAACCCTTCAGAGGAATGGACTGAT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCATTTTCAGGGCAAGATTaGCATAATCAGCCGATTTCC +
Preference number: 4 (lower is better)
Translates to: SYYVTELDFESNIILQRPFSGQD*HNQPIS
Trigger: GGAAATCGGCTGATTATGTCAATCTTGCCCTGAAAA...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR TCA 90 bp AACTACTTTGATCTCTATTTGAATTCCCGGCCATTCAAAGTTCCTTGTCATTTTTTTTCAGGGCAAGATTaGCATAATCAGCCGATTTCC +
Preference number: 4 (lower is better)
Translates to: NYFDLYLNSRPFKVPCHFFSGQD*HNQPIS
Trigger: GGAAATCGGCTGATTATGTCAATCTTGCCCTGAAAA...AAAATGACAAGGAACTTTGAATGGCCGGGAATTCAAATAGAGATCAAAGTAGTT
38% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626249.2
CDS-3UTR TCA 90 bp CCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGCTTTTCAGGGCAAGATTaGCATAATCAGCCGATTTCC +
Preference number: 4 (lower is better)
Translates to: PKTQQIPILYKVTIHNYSFSGQD*HNQPIS
Trigger: GGAAATCGGCTGATTATGTCAATCTTGCCCTGAAAA...GCTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000625891.2
ENST00000628515.2
CDS-3UTR TCA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCAGCCACTGATTGTCATTaGGAGGTTTATTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: CRLTNFASITCPHNGSYSATDCH*EVYLSF
Trigger: GAAGCTCAAATAAACCTCTCAATGACAATCAGTGGC...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCACTATGCAGGGAACCCTaGTATGTTTGGTATGAAGAT +
Preference number: 4 (lower is better)
Translates to: CRLTNFASITCPHNGSYSLCREP*YVWYED
Trigger: ATCTTCATACCAAACATATCAGGGTTCCCTGCATAG...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp ACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGTCTTAACAATTACAATCAGCCTCCAGACGTTTaGGAAATAAGTTTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: THQLVQVEELYPGLNNYNQPPDV*EISFCY
Trigger: GTAACAGAAACTTATTTCTCAAACGTCTGGAGGCTG...ATTGTAATTGTTAAGACCTGGATACAACTCTTCCACCTGAACTAATTGATGAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGAAATTTCCCAATGATTaGATCTATGCCCTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTEKFPND*IYALLF
Trigger: AAACAAGAGGGCATAGATGCAATCATTGGGAAATTT...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGAAATTTCCCAATGATTaGATCTATGCCCTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMKFPND*IYALLF
Trigger: AAACAAGAGGGCATAGATGCAATCATTGGGAAATTT...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCGTGACTTTCACATCATaGCAGGCATTATCATTAAAC +
Preference number: 4 (lower is better)
Translates to: SFQLQQPELRCRLTNFASVTFTS*QALSLN
Trigger: GTTTAATGATAATGCCTGGCATGATGTGAAAGTCAC...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAATCTTAGGATCTCCTTaGTTGGCAAGTCGAGATAAT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKILGSP*LASRDN
Trigger: ATTATCTCGACTTGCCAAGCAAGGAGATCCTAAGAT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTAAATGTCAAGCTCTaGAGGTGTCCAATGAAGTTG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKLNVKL*RCPMKL
Trigger: CAACTTCATTGGACACCTGCAGAGCTTGACATTTAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGACACAGGTCAATGTATaGCATTCCATTAAATGTCAA +
Preference number: 4 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTETQVNV*HSIKCQ
Trigger: TTGACATTTAATGGAATGGCATACATTGACCTGTGT...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCATAGCTTCAAAGGCCTaGTTCTTCTGTCATAGCATG +
Preference number: 4 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSIIASKA*FFCHSM
Trigger: CATGCTATGACAGAAGAAGCAGGCCTTTGAAGCTAT...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401669.7
ENST00000406316.6
CDS-3UTR GCA 90 bp CCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGCATAGCTTCAAAGGCCTaGTTCTTCTGTCATAGCATG +
Preference number: 4 (lower is better)
Translates to: PKTQQIPILYKVTIHNYSIASKA*FFCHSM
Trigger: CATGCTATGACAGAAGAAGCAGGCCTTTGAAGCTAT...GCTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR GCA 90 bp TTAGATATTACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGTCTTAACATAGCTTCAAAGGCCTaGTTCTTCTGTCATAGCATG +
Preference number: 4 (lower is better)
Translates to: LDITHQLVQVEELYPGLNIASKA*FFCHSM
Trigger: CATGCTATGACAGAAGAAGCAGGCCTTTGAAGCTAT...GTTAAGACCTGGATACAACTCTTCCACCTGAACTAATTGATGAGTAATATCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR GCA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGTACATATTTCTAAGGTaGTGTATGTCTGAAATCCAG +
Preference number: 4 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMYIFLR*CMSEIQ
Trigger: CTGGATTTCAGACATACAGCACCTTAGAAATATGTA...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp GATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACAGCCTCCAATCAAAGTaGCAACATTCGCTGATAATT +
Preference number: 4 (lower is better)
Translates to: DFSNWKLCTSQTNSLYSNSLQSK*QHSLII
Trigger: AATTATCAGCGAATGTTGGCACTTTGATTGGAGGCT...GTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp TCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACCCAGTTTATGGTAGTAACTGGAAGTTGTaGACTTCACAGACAAATTCG +
Preference number: 4 (lower is better)
Translates to: SRRLRNKFLLLTSYPVYGSNWKL*TSQTNS
Trigger: CGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACT...ACCATAAACTGGGTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp GGTAATATTAGATATTACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGAAGGGGATCCAGTATTaGAAGAGTAGAGGTAACACA +
Preference number: 4 (lower is better)
Translates to: GNIRYYSSISSGGRVVSRKGIQY*KSRGNT
Trigger: TGTGTTACCTCTACTCTTGCAATACTGGATCCCCTT...CCTGGATACAACTCTTCCACCTGAACTAATTGATGAGTAATATCTAATATTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp TATTTAATTTGCAGCCATATAATTTGCAAGCATTTGCCCATCCTTTGCAGTGATCATTTGCCCATCCTTTaGAGTGATGGTTTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: YLICSHIICKHLPILCSDHLPIL*SDGLKA
Trigger: TGCTTTCAAACCATCACTGCAAAGGATGGGCAAATG...ATCACTGCAAAGGATGGGCAAATGCTTGCAAATTATATGGCTGCAAATTAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496792.3
CDS-3UTR GCA 90 bp CCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGAACCAAGTACATCACTaGTTACCAACAGCACCTATG +
Preference number: 4 (lower is better)
Translates to: PQNPTNSNLIQSYNTQLQNQVHH*LPTAPM
Trigger: CATAGGTGCTGTTGGTAAGCAGTGATGTACTTGGTT...CTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR GCA 90 bp TCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACCCAGTTTATGGTGTACCATTTCAGTGGTaGACATGCTTAGACTTATGT +
Preference number: 4 (lower is better)
Translates to: SRRLRNKFLLLTSYPVYGVPFQW*TCLDLC
Trigger: ACATAAGTCTAAGCATGTGCACCACTGAAATGGTAC...ACCATAAACTGGGTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAACTCCAATTTTTCCCTaGTGTATATGCAGTTCTAGG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKTPIFP*CICSSR
Trigger: CCTAGAACTGCATATACACCAGGGAAAAATTGGAGT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
CDS-3UTR CCA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCACATTGGATTCTTCAATaGCGATGTCATCTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: CRLTNFASITCPHNGSYSHWILQ*RCHLSQ
Trigger: TTGGGACAGATGACATCGCCATTGAAGAATCCAATG...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCAAGCTTTTCGCACTGCTaGGTTGTTTCTCCTTTACAA +
Preference number: 4 (lower is better)
Translates to: CRLTNFASITCPHNGSYSSFSHC*VVSPLQ
Trigger: TTGTAAAGGAGAAACAACCCAGCAGTGCGAAAAGCT...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCAAATGCCACCACTCCATaGATCTTCATCTTAGGATCT +
Preference number: 4 (lower is better)
Translates to: SYYVTELDFESNIILQRPNATTP*IFILGS
Trigger: AGATCCTAAGATGAAGATCCATGGAGTGGTGGCATT...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACTAATTCCTTGTGCGTaGTCTCACAAGTTGGATTTT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKLIPCA*SHKLDF
Trigger: AAAATCCAACTTGTGAGACCACGCACAAGGAATTAG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTGGAGACAACGTTCTaGAAAAGGCTTCAACAAAAG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKLETTF*KRLQQK
Trigger: CTTTTGTTGAAGCCTTTTCCAGAACGTTGTCTCCAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACTTCTTAAGGTTACCTaGGAGCAAGATCTCAATGAA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKLLKVT*EQDLNE
Trigger: TTCATTGAGATCTTGCTCCCAGGTAACCTTAAGAAG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAACCCTTCTTATTTAACTaGCTTTCCCTGAGTAAGACT +
Preference number: 4 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKPFLFN*LSLSKT
Trigger: AGTCTTACTCAGGGAAAGCCAGTTAAATAAGAAGGG...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp ATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACAAACCCTGAGTTGTTATaGAGCACAGAAGGATCAACA +
Preference number: 4 (lower is better)
Translates to: ILVTGSCALHRQIRYIATNPELL*STEGST
Trigger: TGTTGATCCTTCTGTGCTCCATAACAACTCAGGGTT...TGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
CDS-3UTR CCA 90 bp GATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACTTTGACTCTTTAAAATaGACAGTTGAAACCACCGCC +
Preference number: 4 (lower is better)
Translates to: DFSNWKLCTSQTNSLYSNFDSLK*TVETTA
Trigger: GGCGGTGGTTTCAACTGTCCATTTTAAAGAGTCAAA...GTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACAAGGATGTCATCTGTaGTTTCTGCTAGCTCTAATT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKQGCHL*FLLALI
Trigger: AATTAGAGCTAGCAGAAACCACAGATGACATCCTTG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630656.1
CDS-3UTR CCA 90 bp AACTACTTTGATCTCTATTTGAATTCCCGGCCATTCAAAGTTCCTTGTCATTTTAGAAAGGTGGATATTTaGAAGGAACAGTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: NYFDLYLNSRPFKVPCHFRKVDI*KEQSSP
Trigger: GGGAGAAGACTGTTCCTTCCAAATATCCACCTTTCT...AAAATGACAAGGAACTTTGAATGGCCGGGAATTCAAATAGAGATCAAAGTAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626249.2
CDS-3UTR TCA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCAAATACGGCTTCTTTCTaGACAGTGCTAAAACCTATG +
Preference number: 4 (lower is better)
Translates to: CRLTNFASITCPHNGSYSNTASF*TVLKPM
Trigger: CATAGGTTTTAGCACTGTTCAGAAAGAAGCCGTATT...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCAATCAGTCCATTCCTCTaGAGGGTTTTAAATGACAGA +
Preference number: 4 (lower is better)
Translates to: SYYVTELDFESNIILQRPISPFL*RVLNDR
Trigger: TCTGTCATTTAAAACCCTTCAGAGGAATGGACTGAT...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR TCA 90 bp CTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTATCAGTCCATTCCTCTaGAGGGTTTTAAATGACAGA +
Preference number: 4 (lower is better)
Translates to: LSPKPNKFQSYTKLQYTTISPFL*RVLNDR
Trigger: TCTGTCATTTAAAACCCTTCAGAGGAATGGACTGAT...AGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000625891.2
ENST00000628515.2
CDS-3UTR TCA 90 bp CCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGATCAGTCCATTCCTCTaGAGGGTTTTAAATGACAGA +
Preference number: 4 (lower is better)
Translates to: PQNPTNSNLIQSYNTQLQISPFL*RVLNDR
Trigger: TCTGTCATTTAAAACCCTTCAGAGGAATGGACTGAT...CTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000625891.2
ENST00000628515.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATGTACGGAAATCAAATaGTATGGAGCCAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKCTEIK*YGASFL
Trigger: AAGAAAACTGGCTCCATATCATTTGATTTCCGTACA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTGGTTGTGTGTTGGTaGTGCATTTTGGTTTTATCT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKLVVCW*CILVLS
Trigger: AGATAAAACCAAAATGCATCACCAACACACAACCAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
CDS-3UTR TCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCATGTATGTGGGAATGTaGGTATTTCAGGGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: CNNIISVHENFPMIASMPMYVGM*VFQGEK
Trigger: CTTTTCTCCCTGAAATACTCACATTCCCACATACAT...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR TCA 90 bp ATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACATTCATGAAGACTATTTaGATCCATCTACCCACAACC +
Preference number: 4 (lower is better)
Translates to: ILVTGSCALHRQIRYIATFMKTI*IHLPTT
Trigger: GGTTGTGGGTAGATGGATTCAAATAGTCTTCATGAA...TGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
CDS-3UTR TCA 90 bp CTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTCTTTCATGCTGGATCTaGAATGATGAGACCATGAAT +
Preference number: 4 (lower is better)
Translates to: LSPKPNKFQSYTKLQYTTLSCWI*NDETMN
Trigger: ATTCATGGTCTCATCATTTCAGATCCAGCATGAAAG...AGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACCCATCATTAATGATTaGATTGGATTCTTCAATGGC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKPIIND*IGFFNG
Trigger: GCCATTGAAGAATCCAATGCAATCATTAATGATGGG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000637906.1
CDS-3UTR GCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCTTGGTTTTTGTGTTGTaGCTTGATGCTGTAGTACTC +
Preference number: 4 (lower is better)
Translates to: CNNIISVHENFPMIASMPLVFVL*LDAVVL
Trigger: GAGTACTACAGCATCAAGGCACAACACAAAAACCAA...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCAAATTTCCCAATGATTaGATCTATGCCCTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: SFQLQQPELRCRLTNFASKFPND*IYALLF
Trigger: AAACAAGAGGGCATAGATGCAATCATTGGGAAATTT...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGACTTTCACATCATaGCAGGCATTATCATTAAAC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKVTFTS*QALSLN
Trigger: GTTTAATGATAATGCCTGGCATGATGTGAAAGTCAC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCAATCTTAGGATCTCCTTaGTTGGCAAGTCGAGATAAT +
Preference number: 4 (lower is better)
Translates to: SYYVTELDFESNIILQRPILGSP*LASRDN
Trigger: ATTATCTCGACTTGCCAAGCAAGGAGATCCTAAGAT...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAATTCTCACATTTAAATaGCACCACTCCATGGATCTT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKILTFK*HHSMDL
Trigger: AAGATCCATGGAGTGGTGGCATTTAAATGTGAGAAT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCATTAAATGTCAAGCTCTaGAGGTGTCCAATGAAGTTG +
Preference number: 4 (lower is better)
Translates to: SYYVTELDFESNIILQRPLNVKL*RCPMKL
Trigger: CAACTTCATTGGACACCTGCAGAGCTTGACATTTAA...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR GCA 90 bp ATATTATACTTCAAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACACACAGGTCAATGTATaGCATTCCATTAAATGTCAA +
Preference number: 4 (lower is better)
Translates to: ILYFKGHLCSFKHSSCLHTQVNV*HSIKCQ
Trigger: TTGACATTTAATGGAATGGCATACATTGACCTGTGT...GTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTTGAAGTATAATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR GCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCTGCAAGTTTTCACAGTaGCATCTCATATCCATGTCT +
Preference number: 4 (lower is better)
Translates to: CNNIISVHENFPMIASMPCKFSQ*HLISMS
Trigger: AGACATGGATATGAGATGGCACTGTGAAAACTTGCA...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412315.5
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCATATTTGCTACTGTATaGACGTTTGGATCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: CNNIISVHENFPMIASMPIFATV*TFGSSS
Trigger: GCTGGAAGATCCAAACGTGCATACAGTAGCAAATAT...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAATTTGCTTCCATAACCTaGCCACATAATGGTTCTTAT +
Preference number: 4 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKFASIT*PHNGSY
Trigger: ATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAA...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACCCAGTTTATGGTTCATTTCTTACATATTaGCTGGCTCATGTTCAGATG +
Preference number: 4 (lower is better)
Translates to: SRRLRNKFLLLTSYPVYGSFLTY*LAHVQM
Trigger: CATCTGAACATGAGCCAGGCAATATGTAAGAAATGA...ACCATAAACTGGGTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS-3UTR CCA 90 bp ATATTATACTTCAAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACGGAAATCAAATGATATaGAGCCAGTTTTCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: ILYFKGHLCSFKHSSCLHGNQMI*SQFSLH
Trigger: ATGCAAAGAAAACTGGCTCCATATCATTTGATTTCC...GTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTTGAAGTATAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACGTGGTCTCACAAGTTaGATTTTACTTCTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKRGLTS*ILLLFS
Trigger: TGAAAAGAGAAGTAAAATCCAACTTGTGAGACCACG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
CDS-3UTR CCA 90 bp GATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACCGTGGTCTCACAAGTTaGATTTTACTTCTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: DFSNWKLCTSQTNSLYSNRGLTS*ILLLFS
Trigger: TGAAAAGAGAAGTAAAATCCAACTTGTGAGACCACG...GTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR CCA 90 bp TCTTTAAAATGGACAGTTGAAACCACCGCCCCCAAACAAATACATTTAAGTCATCGTGGTCTCACAAGTTaGATTTTACTTCTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: SLKWTVETTAPKQIHLSHRGLTS*ILLLFS
Trigger: TGAAAAGAGAAGTAAAATCCAACTTGTGAGACCACG...ATGACTTAAATGTATTTGTTTGGGGGCGGTGGTTTCAACTGTCCATTTTAAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR CCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCCTAATTCCTTGTGCGTaGTCTCACAAGTTGGATTTT +
Preference number: 4 (lower is better)
Translates to: CNNIISVHENFPMIASMPLIPCA*SHKLDF
Trigger: AAAATCCAACTTGTGAGACCACGCACAAGGAATTAG...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CCA 90 bp ATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACACTAATTCCTTGTGCGTaGTCTCACAAGTTGGATTTT +
Preference number: 4 (lower is better)
Translates to: ILVTGSCALHRQIRYIATLIPCA*SHKLDF
Trigger: AAAATCCAACTTGTGAGACCACGCACAAGGAATTAG...TGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR CCA 90 bp CCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGTTGGAGACAACGTTCTaGAAAAGGCTTCAACAAAAG +
Preference number: 4 (lower is better)
Translates to: PQNPTNSNLIQSYNTQLQLETTF*KRLQQK
Trigger: CTTTTGTTGAAGCCTTTTCCAGAACGTTGTCTCCAA...CTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CCA 90 bp ATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACATTGGAGACAACGTTCTaGAAAAGGCTTCAACAAAAG +
Preference number: 4 (lower is better)
Translates to: ILVTGSCALHRQIRYIATLETTF*KRLQQK
Trigger: CTTTTGTTGAAGCCTTTTCCAGAACGTTGTCTCCAA...TGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR CCA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCAATAGTGAATGTATGTaGGAATGTGAGTATTTCAGG +
Preference number: 4 (lower is better)
Translates to: SFQLQQPELRCRLTNFASNSECM*ECEYFR
Trigger: CCTGAAATACTCACATTCCCACATACATTCACTATT...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCTGGTATGAAGATACTTaGGATTCAAGTCATTTTCTC +
Preference number: 4 (lower is better)
Translates to: SFQLQQPELRCRLTNFASWYEDT*DSSHFL
Trigger: GAGAAAATGACTTGAATCCCAAGTATCTTCATACCA...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCAAGGGTAGGGTTATGTaGCCTTTCTTTGATGTCTTA +
Preference number: 4 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSIKGRVM*PFFDVL
Trigger: TAAGACATCAAAGAAAGGCCACATAACCCTACCCTT...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000636345.1
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTGTTTTTAGGCTTCTaGTATCTTAAACCCTGCATG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKLFLGF*YLKPCM
Trigger: CATGCAGGGTTTAAGATACCAGAAGCCTAAAAACAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000630656.1
CDS-3UTR CCA 90 bp CTTTCTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACTACCAACAGCACCTATaGCTAACAGTGAATTCAAAG +
Preference number: 4 (lower is better)
Translates to: LSLPKTQQIPILYKVTIHYQQHL*LTVNSK
Trigger: CTTTGAATTCACTGTTAGCCATAGGTGCTGTTGGTA...GTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR TCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCTGTACGGAAATCAAATaGTATGGAGCCAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: CNNIISVHENFPMIASMPCTEIK*YGASFL
Trigger: AAGAAAACTGGCTCCATATCATTTGATTTCCGTACA...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR TCA 90 bp CCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGCTTGGTTGTGTGTTGGTaGTGCATTTTGGTTTTATCT +
Preference number: 4 (lower is better)
Translates to: PKTQQIPILYKVTIHNYSLVVCW*CILVLS
Trigger: AGATAAAACCAAAATGCATCACCAACACACAACCAA...GCTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR TCA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCGCAACCAATTTTTCCTaGAACATCAACTTGCAATGT +
Preference number: 4 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSIATNFS*NINLQC
Trigger: ACATTGCAAGTTGATGTTTCAGGAAAAATTGGTTGC...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGCCAATTATTATGGTTaGTTGGCTATTGAAGATTGT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKANYYG*LAIEDC
Trigger: ACAATCTTCAATAGCCAAGCAACCATAATAATTGGC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000637906.1
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAAACTCTTAAAGGTTTaGAGGTTGAGTCACTCAAAA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKKLLKV*RLSHSK
Trigger: TTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCAGTGACTTTCACATCATaGCAGGCATTATCATTAAAC +
Preference number: 4 (lower is better)
Translates to: SYYVTELDFESNIILQRPVTFTS*QALSLN
Trigger: GTTTAATGATAATGCCTGGCATGATGTGAAAGTCAC...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR GCA 90 bp CCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGCGTGACTTTCACATCATaGCAGGCATTATCATTAAAC +
Preference number: 4 (lower is better)
Translates to: PKTQQIPILYKVTIHNYSVTFTS*QALSLN
Trigger: GTTTAATGATAATGCCTGGCATGATGTGAAAGTCAC...GCTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625891.2
ENST00000628515.2
CDS-3UTR GCA 90 bp CCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGGTGACTTTCACATCATaGCAGGCATTATCATTAAAC +
Preference number: 4 (lower is better)
Translates to: PQNPTNSNLIQSYNTQLQVTFTS*QALSLN
Trigger: GTTTAATGATAATGCCTGGCATGATGTGAAAGTCAC...CTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000625891.2
ENST00000628515.2
CDS-3UTR GCA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCAATTCTCACATTTAAATaGCACCACTCCATGGATCTT +
Preference number: 4 (lower is better)
Translates to: SYYVTELDFESNIILQRPILTFK*HHSMDL
Trigger: AAGATCCATGGAGTGGTGGCATTTAAATGTGAGAAT...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR GCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAACACAGGTCAATGTATaGCATTCCATTAAATGTCAA +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKTQVNV*HSIKCQ
Trigger: TTGACATTTAATGGAATGGCATACATTGACCTGTGT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCTTTGCTTCCATAACCTaGCCACATAATGGTTCTTAT +
Preference number: 4 (lower is better)
Translates to: CNNIISVHENFPMIASMPFASIT*PHNGSY
Trigger: ATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAA...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp GATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACTTCTTAGTTTGTATATaGACCAAACACAGGCATTTC +
Preference number: 4 (lower is better)
Translates to: DFSNWKLCTSQTNSLYSNFLVCI*TKHRHF
Trigger: GAAATGCCTGTGTTTGGTGCATATACAAACTAAGAA...GTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp AACTACTTTGATCTCTATTTGAATTCCCGGCCATTCAAAGTTCCTTGTCATTTTGTTAGTTGTTCTACGTaGAAGCAAAGTCTCATTTCA +
Preference number: 4 (lower is better)
Translates to: NYFDLYLNSRPFKVPCHFVSCST*KQSLIS
Trigger: TGAAATGAGACTTTGCTTGCACGTAGAACAACTAAC...AAAATGACAAGGAACTTTGAATGGCCGGGAATTCAAATAGAGATCAAAGTAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626249.2
CDS-3UTR GCA 90 bp TTCTATATGTTTGCCACAGCTGCATACCACTTACTTCCTTTTAATGACAACATTTTTCAGTGGTGCACATaGTTAGACTTATGTCTCAAT +
Preference number: 4 (lower is better)
Translates to: FYMFATAAYHLLPFNDNIFQWCT*LDLCLN
Trigger: ATTGAGACATAAGTCTAAGCATGTGCACCACTGAAA...AATGTTGTCATTAAAAGGAAGTAAGTGGTATGCAGCTGTGGCAAACATATAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAATTATTATGGTTGCTTaGCTATTGAAGATTGTGAGC +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKIIMVA*LLKIVS
Trigger: GCTCACAATCTTCAATAGCCAAGCAACCATAATAAT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000637906.1
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGGAAATCAAATGATATaGAGCCAGTTTTCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKGNQMI*SQFSLH
Trigger: ATGCAAAGAAAACTGGCTCCATATCATTTGATTTCC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CCA 90 bp CTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTCGTGGTCTCACAAGTTaGATTTTACTTCTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: LSPKPNKFQSYTKLQYTTRGLTS*ILLLFS
Trigger: TGAAAAGAGAAGTAAAATCCAACTTGTGAGACCACG...AGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CCA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAATAGTGAATGTATGTaGGAATGTGAGTATTTCAGG +
Preference number: 4 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKNSECM*ECEYFR
Trigger: CCTGAAATACTCACATTCCCACATACATTCACTATT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAATGGTATGAAGATACTTaGGATTCAAGTCATTTTCTC +
Preference number: 4 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKWYEDT*DSSHFL
Trigger: GAGAAAATGACTTGAATCCCAAGTATCTTCATACCA...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CCA 90 bp AGATCTACTCTTCACAAAGAGAATAAGGCTTATGCACTTTCAGAATGTGTAACTCACATAAGACAGACTTaGATTGATGTTATGCTTTCC +
Preference number: 4 (lower is better)
Translates to: RSTLHKENKAYALSECVTHIRQT*IDVMLS
Trigger: GGAAAGCATAACATCAATCCAAGTCTGTCTTATGTG...AGTTACACATTCTGAAAGTGCATAAGCCTTATTCTCTTTGTGAAGAGTAGATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR CCA 90 bp GGTAATATTAGATATTACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGCAGAGCCTTTATGAATaGGATTGCTGTCCTTATAAA +
Preference number: 4 (lower is better)
Translates to: GNIRYYSSISSGGRVVSRQSLYE*DCCPYK
Trigger: TTTATAAGGACAGCAATCCCATTCATAAAGGCTCTG...CCTGGATACAACTCTTCCACCTGAACTAATTGATGAGTAATATCTAATATTACC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
3UTR CAA 72 bp AATTTGATAATCACATACACAAAAGTAACTTTCCAATaGAGGGTTAGTTGTTCTACGTGCAAGCAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: NLIITYTKVTFQ*RVSCSTCKQSL
Trigger: GAGACTTTGCTTGCACGTAGAACAACTAACCCTCAATTGGAAAGTTACTTTTGTGTATGTGATTATCAAATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626249.2
CDS-3UTR GCA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCGCCAATTATTATGGTTaGTTGGCTATTGAAGATTGT +
Preference number: 4 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSIANYYG*LAIEDC
Trigger: ACAATCTTCAATAGCCAAGCAACCATAATAATTGGC...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCAAACTCTTAAAGGTTTaGAGGTTGAGTCACTCAAAA +
Preference number: 4 (lower is better)
Translates to: CNNIISVHENFPMIASMPKLLKV*RLSHSK
Trigger: TTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCACACAGGTCAATGTATaGCATTCCATTAAATGTCAA +
Preference number: 4 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSITQVNV*HSIKCQ
Trigger: TTGACATTTAATGGAATGGCATACATTGACCTGTGT...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR GCA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCTACATATTTCTAAGGTaGTGTATGTCTGAAATCCAG +
Preference number: 4 (lower is better)
Translates to: CNNIISVHENFPMIASMPYIFLR*CMSEIQ
Trigger: CTGGATTTCAGACATACAGCACCTTAGAAATATGTA...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR GCA 90 bp TTAGATATTACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGTCTTAACCTTTATGAATGGGATTaGTGTCCTTATAAAAGACAC +
Preference number: 4 (lower is better)
Translates to: LDITHQLVQVEELYPGLNLYEWD*CPYKRH
Trigger: GTGTCTTTTATAAGGACAGCAATCCCATTCATAAAG...GTTAAGACCTGGATACAACTCTTCCACCTGAACTAATTGATGAGTAATATCTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp ACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGTCTTAACAATTACAATTTCTTAGTTTGTATATaGACCAAACACAGGCATTTC +
Preference number: 4 (lower is better)
Translates to: THQLVQVEELYPGLNNYNFLVCI*TKHRHF
Trigger: GAAATGCCTGTGTTTGGTGCATATACAAACTAAGAA...ATTGTAATTGTTAAGACCTGGATACAACTCTTCCACCTGAACTAATTGATGAGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR GCA 90 bp CCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGCTTGAATTTAAAGTTGTaGCGTTTGACTCTGGAACAT +
Preference number: 4 (lower is better)
Translates to: PKTQQIPILYKVTIHNYSLNLKL*RLTLEH
Trigger: ATGTTCCAGAGTCAAACGGCACAACTTTAAATTCAA...GCTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625891.2
ENST00000628515.2
CDS-3UTR GCA 90 bp CCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGGAATTACATAGTCGTTaGTTCTCCTATAGGCTAATT +
Preference number: 4 (lower is better)
Translates to: PQNPTNSNLIQSYNTQLQELHSR*FSYRLI
Trigger: AATTAGCCTATAGGAGAAGCAACGACTATGTAATTC...CTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000625891.2
ENST00000628515.2
CDS-3UTR GCA 90 bp AACTACTTTGATCTCTATTTGAATTCCCGGCCATTCAAAGTTCCTTGTCATTTTCTGTCAAAACAGTGTTaGCTTTGCAAAAATCAGATT +
Preference number: 4 (lower is better)
Translates to: NYFDLYLNSRPFKVPCHFLSKQC*LCKNQI
Trigger: AATCTGATTTTTGCAAAGGCAACACTGTTTTGACAG...AAAATGACAAGGAACTTTGAATGGCCGGGAATTCAAATAGAGATCAAAGTAGTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000626249.2
CDS CCA 90 bp CGGGCGAGCCCAGCTCGGCGCCGCACCGGAGCATCCTCTGGTACATaGCGGGGCGCCCGCCGAGGGGCAGCCGCCGCGGGAGGCAAAGTT +
Preference number: 5 (lower is better)
Translates to: RASPARRRTGASSGT*RGARRGAAAAGGKV
Trigger: AACTTTGCCTCCCGCGGCGGCTGCCCCTCGGCGGGCGCCCCGCCATGTACCAGAGGATGCTCCGGTGCGGCGCCGAGCTGGGCTCGCCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000628364.2
CDS CCA 90 bp GCGGCGGGCCCGTCCTTTGGCTGGGGAATGGGTGGGCTCGGCCCGTaGTCGCAGCCCCTCCAGGTCTGGATGCTGCGGAGCGAGGTGCTT +
Preference number: 5 (lower is better)
Translates to: AAGPSFGWGMGGLGP*SQPLQVWMLRSEVL
Trigger: AAGCACCTCGCTCCGCAGCATCCAGACCTGGAGGGGCTGCGACCACGGGCCGAGCCCACCCATTCCCCAGCCAAAGGACGGGCCCGCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406316.6
ENST00000626899.1
CDS CCA 90 bp CCGCAGTACCATGGAGAGCGGCGGGCCCGTCCTTTGGCTGGGGAATaGGTGGGCTCGGCCCGTGGTCGCAGCCCCTCCAGGTCTGGATGC +
Preference number: 5 (lower is better)
Translates to: PQYHGERRARPLAGE*VGSARGRSPSRSGC
Trigger: GCATCCAGACCTGGAGGGGCTGCGACCACGGGCCGAGCCCACCCATTCCCCAGCCAAAGGACGGGCCCGCCGCTCTCCATGGTACTGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404971.5
ENST00000406316.6
ENST00000626899.1
CDS CCA 90 bp GAGCTCTCCGCAGTACCATGGAGAGCGGCGGGCCCGTCCTTTGGCTaGGGAATGGGTGGGCTCGGCCCGTGGTCGCAGCCCCTCCAGGTC +
Preference number: 5 (lower is better)
Translates to: ELSAVPWRAAGPSFG*GMGGLGPWSQPLQV
Trigger: GACCTGGAGGGGCTGCGACCACGGGCCGAGCCCACCCATTCCCCAGCCAAAGGACGGGCCCGCCGCTCTCCATGGTACTGCGGAGAGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404971.5
ENST00000406316.6
ENST00000626899.1
CDS TCA 90 bp CGCGCATCGCCTGCTCCCGAGGCAATCTCCGCGTCCGCCGCCTCCTaGCACTTACGCCCGGCGAGGGGTTCAGAGGGAAGAGTGCGCCCT +
Preference number: 5 (lower is better)
Translates to: RASPAPEAISASAAS*HLRPARGSEGRVRP
Trigger: AGGGCGCACTCTTCCCTCTGAACCCCTCGCCGGGCGTAAGTGTCAGGAGGCGGCGGACGCGGAGATTGCCTCGGGAGCAGGCGATGCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000628364.2
CDS CCA 90 bp ATCTCGCTCTCGCAGCAGGCGTTCCACTTGGGGAAGCGCGTCCATTaGCCCTCGGCGCCCGGAAACTCCAGCCCGCTGCCCAGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: ISLSQQAFHLGKRVH*PSAPGNSSPLPSSA
Trigger: GGCGGAGCTGGGCAGCGGGCTGGAGTTTCCGGGCGCCGAGGGCCAATGGACGCGCTTCCCCAAGTGGAACGCCTGCTGCGAGAGCGAGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000625672.2
ENST00000626899.1
ENST00000628515.2
ENST00000630543.2
ENST00000637511.1
ENST00000675235.1
CDS CCA 90 bp AGTACCATGGAGAGCGGCGGGCCCGTCCTTTGGCTGGGGAATGGGTaGGCTCGGCCCGTGGTCGCAGCCCCTCCAGGTCTGGATGCTGCG +
Preference number: 5 (lower is better)
Translates to: STMESGGPVLWLGNG*ARPVVAAPPGLDAA
Trigger: CGCAGCATCCAGACCTGGAGGGGCTGCGACCACGGGCCGAGCCCACCCATTCCCCAGCCAAAGGACGGGCCCGCCGCTCTCCATGGTACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404971.5
ENST00000406316.6
ENST00000626899.1
CDS CCA 90 bp CAGTCCTTGCCGCGGAAGCCGGTTCGCGAGCAGTCGCACACGGCCTaGTCGTCCACCACGGAGCACACACCTCCGTTGAGGCACACCCCG +
Preference number: 5 (lower is better)
Translates to: QSLPRKPVREQSHTA*SSTTEHTPPLRHTP
Trigger: CGGGGTGTGCCTCAACGGAGGTGTGTGCTCCGTGGTGGACGACCAGGCCGTGTGCGACTGCTCGCGAACCGGCTTCCGCGGCAAGGACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000496792.3
ENST00000625672.2
ENST00000626899.1
ENST00000627198.2
ENST00000628515.2
ENST00000630543.2
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS GCA 90 bp ATGAAGAGCGTGGTGTTGCGGAACTGGCGGCGGATGCGCACGCTGTaGCAGGCGCCGTCGTTAACCGGCGTGTCGGCCAGGAGCGTCGCA +
Preference number: 5 (lower is better)
Translates to: MKSVVLRNWRRMRTL*QAPSLTGVSARSVA
Trigger: TGCGACGCTCCTGGCCGACACGCCGGTTAACGACGGCGCCTGGCACAGCGTGCGCATCCGCCGCCAGTTCCGCAACACCACGCTCTTCAT
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000625672.2
ENST00000626899.1
ENST00000628515.2
ENST00000630543.2
ENST00000637511.1
ENST00000675235.1
CDS CCA 90 bp CACTTGGCCTCCACCTGGTCGATGAAGAGCGTGGTGTTGCGGAACTaGCGGCGGATGCGCACGCTGTGCCAGGCGCCGTCGTTAACCGGC +
Preference number: 5 (lower is better)
Translates to: HLASTWSMKSVVLRN*RRMRTLCQAPSLTG
Trigger: GCCGGTTAACGACGGCGCCTGGCACAGCGTGCGCATCCGCCGCCAGTTCCGCAACACCACGCTCTTCATCGACCAGGTGGAGGCCAAGTG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000625672.2
ENST00000626899.1
ENST00000628515.2
ENST00000630543.2
ENST00000637511.1
ENST00000675235.1
CDS GCA 90 bp GGCTCATCGTCCAGCTTCACCTCGCCGCTGTCCACGGGCAGGACCTaGGAGGAGTTGACCCTCACGTCACGAATCCACCCCTTGAAGGGC +
Preference number: 5 (lower is better)
Translates to: GSSSSFTSPLSTGRT*EELTLTSRIHPLKG
Trigger: GCCCTTCAAGGGGTGGATTCGTGACGTGAGGGTCAACTCCTCGCAGGTCCTGCCCGTGGACAGCGGCGAGGTGAAGCTGGACGATGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000496792.3
ENST00000625672.2
ENST00000626899.1
ENST00000628515.2
ENST00000630543.2
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS CCA 90 bp GTCCTTCTGAAAGAGAAGGGCGGAGCTGAGCTCTCCGCAGTACCATaGAGAGCGGCGGGCCCGTCCTTTGGCTGGGGAATGGGTGGGCTC +
Preference number: 5 (lower is better)
Translates to: VLLKEKGGAELSAVP*RAAGPSFGWGMGGL
Trigger: GAGCCCACCCATTCCCCAGCCAAAGGACGGGCCCGCCGCTCTCCATGGTACTGCGGAGAGCTCAGCTCCGCCCTTCTCTTTCAGAAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404971.5
ENST00000406316.6
ENST00000626899.1
CDS-3UTR CAA 90 bp TCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACGGGGAAGCGCGTCCATaGGCCCTCGGCGCCCGGAAA +
Preference number: 5 (lower is better)
Translates to: SLDTDCVSPWSWTSQPPDGEARP*ALGARK
Trigger: TTTCCGGGCGCCGAGGGCCAATGGACGCGCTTCCCC...GTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS TCA 90 bp TTACGTGACGCCGGGTGCTGTCCTTCTGAAAGAGAAGGGCGGAGCTaGGCTCTCCGCAGTACCATGGAGAGCGGCGGGCCCGTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: LRDAGCCPSEREGRS*ALRSTMESGGPVLW
Trigger: CCAAAGGACGGGCCCGCCGCTCTCCATGGTACTGCGGAGAGCTCAGCTCCGCCCTTCTCTTTCAGAAGGACAGCACCCGGCGTCACGTAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404971.5
ENST00000406316.6
ENST00000626899.1
CDS GCA 90 bp CCGCCTCCTGACACTTACGCCCGGCGAGGGGTTCAGAGGGAAGAGTaGGCCCTTCTGAAGGAAGTGGGAATCGAACGGCGGAAAGGCAGC +
Preference number: 5 (lower is better)
Translates to: PPPDTYARRGVQREE*ALLKEVGIERRKGS
Trigger: GCTGCCTTTCCGCCGTTCGATTCCCACTTCCTTCAGAAGGGCGCACTCTTCCCTCTGAACCCCTCGCCGGGCGTAAGTGTCAGGAGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000628364.2
CDS GCA 90 bp GGTGCGCCAGACCTTCCACATTGTTGTCTTCTTGGCTGCAGTCCTTaGCGCGGAAGCCGGTTCGCGAGCAGTCGCACACGGCCTGGTCGT +
Preference number: 5 (lower is better)
Translates to: GAPDLPHCCLLGCSP*RGSRFASSRTRPGR
Trigger: ACGACCAGGCCGTGTGCGACTGCTCGCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAGAAGACAACAATGTGGAAGGTCTGGCGCACC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000401669.7
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000625672.2
ENST00000630543.2
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS GCA 90 bp TCAGGTGCGCCAGACCTTCCACATTGTTGTCTTGGCTGCAGTCCTTaGCGCGGAAGCCGGTTCGCGAGCAGTCGCACACGGCCTGGTCGT +
Preference number: 5 (lower is better)
Translates to: SGAPDLPHCCLGCSP*RGSRFASSRTRPGR
Trigger: ACGACCAGGCCGTGTGCGACTGCTCGCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAGACAACAATGTGGAAGGTCTGGCGCACCTGA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS CCA 90 bp GCTTGTCCGGAAAGGCAGCCCCGGGAACAGCAAGCGCGGAGCGGGTaGCTGCTCCCAGATTTCCAGGGCTCCAGGTTCTCGAGAGATACT +
Preference number: 5 (lower is better)
Translates to: ACPERQPREQQARSG*LLPDFQGSRFSRDT
Trigger: AGTATCTCTCGAGAACCTGGAGCCCTGGAAATCTGGGAGCAGCCACCCGCTCCGCGCTTGCTGTTCCCGGGGCTGCCTTTCCGGACAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000628364.2
CDS CCA 90 bp ATGTCCCTGCGCTTGGACTTGACCTCCACCCACTTGGCCTCCACCTaGTCGATGAAGAGCGTGGTGTTGCGGAACTGGCGGCGGATGCGC +
Preference number: 5 (lower is better)
Translates to: MSLRLDLTSTHLAST*SMKSVVLRNWRRMR
Trigger: GCGCATCCGCCGCCAGTTCCGCAACACCACGCTCTTCATCGACCAGGTGGAGGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGGACAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000625672.2
ENST00000626899.1
ENST00000628515.2
ENST00000630543.2
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACGAGCACACACCTCCGTaGAGGCACACCCCGCCCTCG +
Preference number: 5 (lower is better)
Translates to: SLDTDCVSPWSWTSQPPDEHTPP*RHTPPS
Trigger: CGAGGGCGGGGTGTGCCTCAACGGAGGTGTGTGCTC...GTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS GCA 90 bp CCATCATCAGGTGCGCCAGACCTTCCACATTGTTGTCTTCTTGGCTaGAGTCCTTGCCGCGGAAGCCGGTTCGCGAGCAGTCGCACACGG +
Preference number: 5 (lower is better)
Translates to: PSSGAPDLPHCCLLG*SPCRGSRFASSRTR
Trigger: CCGTGTGCGACTGCTCGCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAGAAGACAACAATGTGGAAGGTCTGGCGCACCTGATGATGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000401669.7
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000625672.2
ENST00000630543.2
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS CCA 90 bp AGGGCACCCATCCTCTCCCTCCTTCGGACAGTCTTCTCGGGGTCCTaGAGTCCGCCGTGCCTAGCACCCCAAACAATCCGAAACATAGCC +
Preference number: 5 (lower is better)
Translates to: RAPILSLLRTVFSGS*SPPCLAPQTIRNIA
Trigger: GGCTATGTTTCGGATTGTTTGGGGTGCTAGGCACGGCGGACTCCAGGACCCCGAGAAGACTGTCCGAAGGAGGGAGAGGATGGGTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000611589.4
ENST00000628364.2
CDS-3UTR CAA 90 bp GAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGCTTCCCCCGCCGCTGTaGGGCGGCTCATCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: EPGSKISLDTDCVSPWSWLPPPL*GGSSSS
Trigger: GCTGGACGATGAGCCGCCCAACAGCGGCGGGGGAAG...CCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS GCA 90 bp CTCTCCCTCCTTCGGACAGTCTTCTCGGGGTCCTGGAGTCCGCCGTaGCTAGCACCCCAAACAATCCGAAACATAGCCGAGGCGAATGCA +
Preference number: 5 (lower is better)
Translates to: LSLLRTVFSGSWSPP*LAPQTIRNIAEANA
Trigger: TGCATTCGCCTCGGCTATGTTTCGGATTGTTTGGGGTGCTAGGCACGGCGGACTCCAGGACCCCGAGAAGACTGTCCGAAGGAGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000611589.4
ENST00000628364.2
CDS-3UTR CAA 90 bp TCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACATGAAGAGCGTGGTGTaGCGGAACTGGCGGCGGATG +
Preference number: 5 (lower is better)
Translates to: SLDTDCVSPWSWTSQPPDMKSVV*RNWRRM
Trigger: CATCCGCCGCCAGTTCCGCAACACCACGCTCTTCAT...GTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACTTGACCTCCACCCACTaGGCCTCCACCTGGTCGATG +
Preference number: 5 (lower is better)
Translates to: SLDTDCVSPWSWTSQPPDLTSTH*ASTWSM
Trigger: CATCGACCAGGTGGAGGCCAAGTGGGTGGAGGTCAA...GTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TCTATGAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTGAGGCCAGGGTGAGCTaGAGCGCCGCGGCGCGCAGT +
Preference number: 5 (lower is better)
Translates to: SMNQEAKSHWTPTVSALGEARVS*SAAARS
Trigger: ACTGCGCGCCGCGGCGCTCAAGCTCACCCTGGCCTC...ACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTCATAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp GAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGGAGCACACACCTCCGTaGAGGCACACCCCGCCCTCG +
Preference number: 5 (lower is better)
Translates to: EPGSKISLDTDCVSPWSWEHTPP*RHTPPS
Trigger: CGAGGGCGGGGTGTGCCTCAACGGAGGTGTGTGCTC...CCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTCGGCGGGCCCGTCCTTaGGCTGGGGAATGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLRRARP*AGEWVG
Trigger: GCCCACCCATTCCCCAGCCAAAGGACGGGCCCGCCG...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CAA 90 bp TCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACCGACTGTGTCAGCCCTaGGTCTTGGACTTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: SLDTDCVSPWSWTSQPPDRLCQP*VLDFPA
Trigger: GGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCG...GTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTGGGGAAGCGCGTCCATaGGCCCTCGGCGCCCGGAAA +
Preference number: 5 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGGEARP*ALGARK
Trigger: TTTCCGGGCGCCGAGGGCCAATGGACGCGCTTCCCC...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCTATGAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTCCCCCGCCGCTGTaGGGCGGCTCATCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: SMNQEAKSHWTPTVSALGLPPPL*GGSSSS
Trigger: GCTGGACGATGAGCCGCCCAACAGCGGCGGGGGAAG...ACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTCATAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp CTTCCCACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGTCTTGGCTGCAGTCCTaGCCGCGGAAGCCGGTTCGC +
Preference number: 5 (lower is better)
Translates to: LPTVCGCELRGSSIARVESWLQS*PRKPVR
Trigger: GCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAGA...CTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGTGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS CCA 90 bp AGAGATACTCCCAAAGAGTTTCGGGCGAGAGTGCGTGCCGGCGGGTaGGGGGCCGAGAAATTGTTTAAAGCTCCTCCTGGAAGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: RDTPKEFRARVRAGG*GAEKLFKAPPGRSS
Trigger: TGAGGACCTTCCAGGAGGAGCTTTAAACAATTTCTCGGCCCCCCACCCGCCGGCACGCACTCTCGCCCGAAACTCTTTGGGAGTATCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000628364.2
CDS-3UTR CAA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTGCCGCCTGCTCGGGTaGGGTTGGCTAACCCACCTG +
Preference number: 5 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHCRLLG*GWLTHL
Trigger: CAGGTGGGTTAGCCAACCCAACCCGAGCAGGCGGCA...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000636345.1
CDS-3UTR CAA 90 bp GGCTTTCCTCTTCTGGCTGTGCTAGTAGCCAGGGTCGTGGTAGTCTCCATAATTTGCCGCCTGCTCGGGTaGGGTTGGCTAACCCACCTG +
Preference number: 5 (lower is better)
Translates to: GFPLLAVLVARVVVVSIICRLLG*GWLTHL
Trigger: CAGGTGGGTTAGCCAACCCAACCCGAGCAGGCGGCA...AATTATGGAGACTACCACGACCCTGGCTACTAGCACAGCCAGAAGAGGAAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR CAA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATGAGGCCAGGGTGAGCTaGAGCGCCGCGGCGCGCAGT +
Preference number: 5 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHEARVS*SAAARS
Trigger: ACTGCGCGCCGCGGCGCTCAAGCTCACCCTGGCCTC...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CTTCCCACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGTCACGAATCCACCCCTaGAAGGGCTCCCGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: LPTVCGCELRGSSIARVESRIHP*KGSRSL
Trigger: GAGGGAGCGGGAGCCCTTCAAGGGGTGGATTCGTGA...CTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGTGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TCTATGAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTGAGCACACACCTCCGTaGAGGCACACCCCGCCCTCG +
Preference number: 5 (lower is better)
Translates to: SMNQEAKSHWTPTVSALGEHTPP*RHTPPS
Trigger: CGAGGGCGGGGTGTGCCTCAACGGAGGTGTGTGCTC...ACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTCATAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTTCTTGGCTGCAGTCCTaGCCGCGGAAGCCGGTTCGC +
Preference number: 5 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVSWLQS*PRKPVR
Trigger: GCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAGA...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCTCTTGGCTGCAGTCCTaGCCGCGGAAGCCGGTTCGC +
Preference number: 5 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCSWLQS*PRKPVR
Trigger: GCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAGA...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTCGGCGGGCCCGTCCTTaGGCTGGGGAATGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCRRARP*AGEWVG
Trigger: GCCCACCCATTCCCCAGCCAAAGGACGGGCCCGCCG...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CAA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTCCTGCTCGGGTTGGGTaGGCTAACCCACCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVPARVG*ANPPEL
Trigger: GAGCTCAGGTGGGTTAGCCAACCCAACCCGAGCAGG...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000636345.1
CDS-3UTR CAA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCCGCCTGCTCGGGTaGGGTTGGCTAACCCACCTG +
Preference number: 5 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVCRLLG*GWLTHL
Trigger: CAGGTGGGTTAGCCAACCCAACCCGAGCAGGCGGCA...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000636345.1
CDS-3UTR CAA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTGGGGAAGCGCGTCCATaGGCCCTCGGCGCCCGGAAA +
Preference number: 5 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCGEARP*ALGARK
Trigger: TTTCCGGGCGCCGAGGGCCAATGGACGCGCTTCCCC...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTTCCCTGCGCTTGGACTaGACCTCCACCCACTTGGCC +
Preference number: 5 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVSLRLD*TSTHLA
Trigger: GGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGGA...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TGTTTAATTCATTGTGATTCTGCCAGCCCACAGCAGTGGTCTCTAACATGTCTCGAGGCCAGGGTGAGCTaGAGCGCCGCGGCGCGCAGT +
Preference number: 5 (lower is better)
Translates to: CLIHCDSASPQQWSLTCLEARVS*SAAARS
Trigger: ACTGCGCGCCGCGGCGCTCAAGCTCACCCTGGCCTC...GAGACATGTTAGAGACCACTGCTGTGGGCTGGCAGAATCACAATGAATTAAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
CDS-3UTR CAA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCTCACGAATCCACCCCTaGAAGGGCTCCCGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCSRIHP*KGSRSL
Trigger: GAGGGAGCGGGAGCCCTTCAAGGGGTGGATTCGTGA...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCAGGACCTGCGAGGAGTaGACCCTCACGTCACGAATC +
Preference number: 5 (lower is better)
Translates to: QNLTGHRLCQPLVLDFPARTCEE*TLTSRI
Trigger: GATTCGTGACGTGAGGGTCAACTCCTCGCAGGTCCT...GGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TGCACCCACAGCAGTACCATTTCAGTGGTGCACATGCTTAGACTTATGTCTCAACTTCCCCCGCCGCTGTaGGGCGGCTCATCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: CTHSSTISVVHMLRLMSQLPPPL*GGSSSS
Trigger: GCTGGACGATGAGCCGCCCAACAGCGGCGGGGGAAG...TTGAGACATAAGTCTAAGCATGTGCACCACTGAAATGGTACTGCTGTGGGTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS-3UTR CAA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTCCTGCTCGGGTTGGGTaGGCTAACCCACCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGPARVG*ANPPEL
Trigger: GAGCTCAGGTGGGTTAGCCAACCCAACCCGAGCAGG...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000636345.1
CDS-3UTR CAA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTTGCCGCCTGCTCGGGTaGGGTTGGCTAACCCACCTG +
Preference number: 5 (lower is better)
Translates to: GLTSQESASTLAKSRIIGCRLLG*GWLTHL
Trigger: CAGGTGGGTTAGCCAACCCAACCCGAGCAGGCGGCA...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000636345.1
CDS-3UTR CAA 90 bp TCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACACTCAAACCCAGCAGTaGCGAAATAGCCAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: SLDTDCVSPWSWTSQPPDTQTQQ*RNSQKL
Trigger: CAGCTTCTGGCTATTTCGCAACTGCTGGGTTTGAGT...GTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR CAA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTCAGCAGGCGTTCCACTaGGGGAAGCGCGTCCATTGG +
Preference number: 5 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVQQAFH*GKRVHW
Trigger: CCAATGGACGCGCTTCCCCAAGTGGAACGCCTGCTG...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp ACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGGTAACACAGCAGGCGTTCCACTaGGGGAAGCGCGTCCATTGG +
Preference number: 5 (lower is better)
Translates to: TVCGCELRGSSIARVEVTQQAFH*GKRVHW
Trigger: CCAATGGACGCGCTTCCCCAAGTGGAACGCCTGCTG...TGTTACCTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTCAGCAGGCGTTCCACTaGGGGAAGCGCGTCCATTGG +
Preference number: 5 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLQQAFH*GKRVHW
Trigger: CCAATGGACGCGCTTCCCCAAGTGGAACGCCTGCTG...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTCGGGCGCTGCGAGTCTaGAGCTGGAAGCTCATCTCG +
Preference number: 5 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLRALRV*SWKLIS
Trigger: CGAGATGAGCTTCCAGCTCAAGACTCGCAGCGCCCG...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGAGAGGCCAGGGTGAGCTaGAGCGCCGCGGCGCGCAGT +
Preference number: 5 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGEARVS*SAAARS
Trigger: ACTGCGCGCCGCGGCGCTCAAGCTCACCCTGGCCTC...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CAACAGATGGCACAAGGTGGGGATATTCACATAAGACAGACTTGGATTGATGTTGAGGCCAGGGTGAGCTaGAGCGCCGCGGCGCGCAGT +
Preference number: 5 (lower is better)
Translates to: QQMAQGGDIHIRQTWIDVEARVS*SAAARS
Trigger: ACTGCGCGCCGCGGCGCTCAAGCTCACCCTGGCCTC...AACATCAATCCAAGTCTGTCTTATGTGAATATCCCCACCTTGTGCCATCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTGAGCACACACCTCCGTaGAGGCACACCCCGCCCTCG +
Preference number: 5 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCEHTPP*RHTPPS
Trigger: CGAGGGCGGGGTGTGCCTCAACGGAGGTGTGTGCTC...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTGAGCACACACCTCCGTaGAGGCACACCCCGCCCTCG +
Preference number: 5 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSEHTPP*RHTPPS
Trigger: CGAGGGCGGGGTGTGCCTCAACGGAGGTGTGTGCTC...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCCACATTGTTGTCTTCTaGGCTGCAGTCCTTGCCGCG +
Preference number: 5 (lower is better)
Translates to: QNLTGHRLCQPLVLDFPAHIVVF*AAVLAA
Trigger: CGCGGCAAGGACTGCAGCCAAGAAGACAACAATGTG...GGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTTGCCGCCTGCTCGGGTaGGGTTGGCTGAGCTCGGCT +
Preference number: 5 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCCRLLG*GWLSSA
Trigger: AGCCGAGCTCAGCCAACCCAACCCGAGCAGGCGGCA...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412315.5
ENST00000625672.2
CDS-3UTR CAA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCTGCCGCCTGCTCGGGTaGGGTTGGCTTAAAGGACCA +
Preference number: 5 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLCRLLG*GWLKGP
Trigger: TGGTCCTTTAAGCCAACCCAACCCGAGCAGGCGGCA...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635519.1
CDS-3UTR CAA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACCCCACTATGGCGATGTaGGCATCGTTTTCGGCTGCC +
Preference number: 5 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHPTMAM*ASFSAA
Trigger: GGCAGCCGAAAACGATGCCAACATCGCCATAGTGGG...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GGCTTTCCTCTTCTGGCTGTGCTAGTAGCCAGGGTCGTGGTAGTCTCCATAATTCCCACTATGGCGATGTaGGCATCGTTTTCGGCTGCC +
Preference number: 5 (lower is better)
Translates to: GFPLLAVLVARVVVVSIIPTMAM*ASFSAA
Trigger: GGCAGCCGAAAACGATGCCAACATCGCCATAGTGGG...AATTATGGAGACTACCACGACCCTGGCTACTAGCACAGCCAGAAGAGGAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR CAA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTTGCCGCCTGCTCGGGTaGGGTTGGCTAACCCACCTG +
Preference number: 5 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSCRLLG*GWLTHL
Trigger: CAGGTGGGTTAGCCAACCCAACCCGAGCAGGCGGCA...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000636345.1
CDS-3UTR CAA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCCAACCACTGCTCCAGTaGCACCAGGCGGCAAACTCT +
Preference number: 5 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLQPLLQ*HQAANS
Trigger: AGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTG...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGTCCTCTTGGCAGGTaGTGCTGGGCCCTTCACATC +
Preference number: 5 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCSPLGR*CWALHI
Trigger: GATGTGAAGGGCCCAGCACAACCTGCCAAGAGGACT...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCGTCGTCCCAGGGTCATaGCAGAGTGGTCCACTGAAG +
Preference number: 5 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCVVPGS*QSGPLK
Trigger: CTTCAGTGGACCACTCTGCAATGACCCTGGGACGAC...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGGGGAAGCGCGTCCATaGGCCCTCGGCGCCCGGAAA +
Preference number: 5 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLGEARP*ALGARK
Trigger: TTTCCGGGCGCCGAGGGCCAATGGACGCGCTTCCCC...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCGGGGAAGCGCGTCCATaGGCCCTCGGCGCCCGGAAA +
Preference number: 5 (lower is better)
Translates to: LQQPELRCRLTNFASITCGEARP*ALGARK
Trigger: TTTCCGGGCGCCGAGGGCCAATGGACGCGCTTCCCC...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CAACAGATGGCACAAGGTGGGGATATTCACATAAGACAGACTTGGATTGATGTTGGGGAAGCGCGTCCATaGGCCCTCGGCGCCCGGAAA +
Preference number: 5 (lower is better)
Translates to: QQMAQGGDIHIRQTWIDVGEARP*ALGARK
Trigger: TTTCCGGGCGCCGAGGGCCAATGGACGCGCTTCCCC...AACATCAATCCAAGTCTGTCTTATGTGAATATCCCCACCTTGTGCCATCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CAA 90 bp ACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGGTAACAGTCATGTCCCTGCGCTaGGACTTGACCTCCACCCAC +
Preference number: 5 (lower is better)
Translates to: TVCGCELRGSSIARVEVTVMSLR*DLTSTH
Trigger: GTGGGTGGAGGTCAAGTCCAAGCGCAGGGACATGAC...TGTTACCTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp AAATGTCCATTTGACTCTTTAAAATGGACAGTTGAAACCACCGCCCCCAAACAAGAGGCCAGGGTGAGCTaGAGCGCCGCGGCGCGCAGT +
Preference number: 5 (lower is better)
Translates to: KCPFDSLKWTVETTAPKQEARVS*SAAARS
Trigger: ACTGCGCGCCGCGGCGCTCAAGCTCACCCTGGCCTC...TTGTTTGGGGGCGGTGGTTTCAACTGTCCATTTTAAAGAGTCAAATGGACATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTACTTCCCCCGCCGCTGTaGGGCGGCTCATCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLLPPPL*GGSSSS
Trigger: GCTGGACGATGAGCCGCCCAACAGCGGCGGGGGAAG...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCACTTCCCCCGCCGCTGTaGGGCGGCTCATCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLALPPPL*GGSSSS
Trigger: GCTGGACGATGAGCCGCCCAACAGCGGCGGGGGAAG...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TGCACCCACAGCAGTACCATTTCAGTGGTGCACATGCTTAGACTTATGTCTCAATCTTGGCTGCAGTCCTaGCCGCGGAAGCCGGTTCGC +
Preference number: 5 (lower is better)
Translates to: CTHSSTISVVHMLRLMSQSWLQS*PRKPVR
Trigger: GCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAGA...TTGAGACATAAGTCTAAGCATGTGCACCACTGAAATGGTACTGCTGTGGGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS-3UTR CAA 90 bp CTTCCCACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGCACATTGTTGTCTTCTaGGCTGCAGTCCTTGCCGCG +
Preference number: 5 (lower is better)
Translates to: LPTVCGCELRGSSIARVEHIVVF*AAVLAA
Trigger: CGCGGCAAGGACTGCAGCCAAGAAGACAACAATGTG...CTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGTGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAACGGCGGGCCCGTCCTTaGGCTGGGGAATGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: FVPVSQHFHSVIHSNLPKRRARP*AGEWVG
Trigger: GCCCACCCATTCCCCAGCCAAAGGACGGGCCCGCCG...TTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS-3UTR CAA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCTCAGAGGCGTCAGGCTaGAGCGTCTATCTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLSEASG*SVYLQE
Trigger: CTCCTGGAGATAGACGCTCAAGCCTGACGCCTCTGA...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CAA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTCCCACTATGGCGATGTaGGCATCGTTTTCGGCTGCC +
Preference number: 5 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVPTMAM*ASFSAA
Trigger: GGCAGCCGAAAACGATGCCAACATCGCCATAGTGGG...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCACCTGCTCGGGTTGGGTaGGCTAACCCACCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSPARVG*ANPPEL
Trigger: GAGCTCAGGTGGGTTAGCCAACCCAACCCGAGCAGG...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000636345.1
CDS-3UTR CAA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTCAACCACTGCTCCAGTaGCACCAGGCGGCAAACTCT +
Preference number: 5 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVQPLLQ*HQAANS
Trigger: AGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTG...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp CAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCACTCAAACCCAGCAGTaGCGAAATAGCCAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: QNLTGHRLCQPLVLDFPATQTQQ*RNSQKL
Trigger: CAGCTTCTGGCTATTTCGCAACTGCTGGGTTTGAGT...GGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR CAA 90 bp ATATGCACCAAACACAGGCATTTCAACAGTAAGGGTCTGTCAACATTCACAAACGGGGAAGCGCGTCCATaGGCCCTCGGCGCCCGGAAA +
Preference number: 5 (lower is better)
Translates to: ICTKHRHFNSKGLSTFTNGEARP*ALGARK
Trigger: TTTCCGGGCGCCGAGGGCCAATGGACGCGCTTCCCC...GTTTGTGAATGTTGACAGACCCTTACTGTTGAAATGCCTGTGTTTGGTGCATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCAGCAGGCGTTCCACTaGGGGAAGCGCGTCCATTGG +
Preference number: 5 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHQQAFH*GKRVHW
Trigger: CCAATGGACGCGCTTCCCCAAGTGGAACGCCTGCTG...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCCAGCAGGCGTTCCACTaGGGGAAGCGCGTCCATTGG +
Preference number: 5 (lower is better)
Translates to: TSQESASTLAKSRIIGSFQQAFH*GKRVHW
Trigger: CCAATGGACGCGCTTCCCCAAGTGGAACGCCTGCTG...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAATTGACCTCCACCCACTaGGCCTCCACCTGGTCGATG +
Preference number: 5 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKLTSTH*ASTWSM
Trigger: CATCGACCAGGTGGAGGCCAAGTGGGTGGAGGTCAA...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAGTCATGTCCCTGCGCTaGGACTTGACCTCCACCCAC +
Preference number: 5 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKVMSLR*DLTSTH
Trigger: GTGGGTGGAGGTCAAGTCCAAGCGCAGGGACATGAC...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCGAGGCCAGGGTGAGCTaGAGCGCCGCGGCGCGCAGT +
Preference number: 5 (lower is better)
Translates to: SFQLQQPELRCRLTNFASEARVS*SAAARS
Trigger: ACTGCGCGCCGCGGCGCTCAAGCTCACCCTGGCCTC...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCTCACGAATCCACCCCTaGAAGGGCTCCCGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: TSQESASTLAKSRIIGSFSRIHP*KGSRSL
Trigger: GAGGGAGCGGGAGCCCTTCAAGGGGTGGATTCGTGA...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCTATGAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTAGGACCTGCGAGGAGTaGACCCTCACGTCACGAATC +
Preference number: 5 (lower is better)
Translates to: SMNQEAKSHWTPTVSALGRTCEE*TLTSRI
Trigger: GATTCGTGACGTGAGGGTCAACTCCTCGCAGGTCCT...ACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTCATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGCTTCCCCCGCCGCTGTaGGGCGGCTCATCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMLPPPL*GGSSSS
Trigger: GCTGGACGATGAGCCGCCCAACAGCGGCGGGGGAAG...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TGCAGCCATATAATTTGCAAGCATTTGCCCATCCTTTGCAGTGATGGTTTGAAACTTCCCCCGCCGCTGTaGGGCGGCTCATCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: CSHIICKHLPILCSDGLKLPPPL*GGSSSS
Trigger: GCTGGACGATGAGCCGCCCAACAGCGGCGGGGGAAG...TTTCAAACCATCACTGCAAAGGATGGGCAAATGCTTGCAAATTATATGGCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496792.3
CDS-3UTR CAA 90 bp TCTGAATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCTTCCCCCGCCGCTGTaGGGCGGCTCATCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: SEFLLHFVPVSQHFHSVILPPPL*GGSSSS
Trigger: GCTGGACGATGAGCCGCCCAACAGCGGCGGGGGAAG...AATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TTCAGAATAAACCAAGTACATCACTGCTTACCAACAGCACCTATGGCTAACAGTCTTCCCCCGCCGCTGTaGGGCGGCTCATCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: FRINQVHHCLPTAPMANSLPPPL*GGSSSS
Trigger: GCTGGACGATGAGCCGCCCAACAGCGGCGGGGGAAG...ACTGTTAGCCATAGGTGCTGTTGGTAAGCAGTGATGTACTTGGTTTATTCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CAA 90 bp GAAGAGGAACCTAATTCCTTCATAATGATCTATGAGCTGTTTCCCTCCCCCAATCCTTGGCTGCAGTCCTaGCCGCGGAAGCCGGTTCGC +
Preference number: 5 (lower is better)
Translates to: EEEPNSFIMIYELFPSPNPWLQS*PRKPVR
Trigger: GCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAGG...ATTGGGGGAGGGAAACAGCTCATAGATCATTATGAAGGAATTAGGTTCCTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS TCA 90 bp AGCTCTGGCTTTACTTGTGCACCTTGGTCTCCTGCTCGGAACCCTTaGAAAGAAGCTGCAGCTTTTCGAGGAATGCAGGGGCAAGCAAGA +
Preference number: 5 (lower is better)
Translates to: SSGFTCAPWSPARNP*KEAAAFRGMQGQAR
Trigger: TCTTGCTTGCCCCTGCATTCCTCGAAAAGCTGCAGCTTCTTTTCAAGGGTTCCGAGCAGGAGACCAAGGTGCACAAGTAAAGCCAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635126.1
CDS GCA 90 bp CAAGACTCACACAGGCACTGGCATTCTTCTAGATCCGATGTCCCTTaGCCCACCCCTTACTGTGGCTCTGCCTTGGGTAATCACAACAAA +
Preference number: 5 (lower is better)
Translates to: QDSHRHWHSSRSDVP*PTPYCGSALGNHNK
Trigger: TTTGTTGTGATTACCCAAGGCAGAGCCACAGTAAGGGGTGGGGCAAGGGACATCGGATCTAGAAGAATGCCAGTGCCTGTGTGAGTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635126.1
CDS CCA 90 bp GCAGAGTCTCTAGAAGTGGTTGCCATCAGAATGCCATATGCACGCTaGGATCGGAACCGTAAGGAAACATCCTCAGCCTCCGTATGCATG +
Preference number: 5 (lower is better)
Translates to: AESLEVVAIRMPYAR*DRNRKETSSASVCM
Trigger: CATGCATACGGAGGCTGAGGATGTTTCCTTACGGTTCCGATCCCAGCGTGCATATGGCATTCTGATGGCAACCACTTCTAGAGACTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331040.9
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
ENST00000630543.2
ENST00000636298.1
CDS-3UTR CAA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTACCTGCAACGTGGCATaGCCACCACTCCTCGTGAAA +
Preference number: 5 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVTCNVA*PPLLVK
Trigger: TTTCACGAGGAGTGGTGGCAATGCCACGTTGCAGGT...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTCCCACTATGGCGATGTaGGCATCGTTTTCGGCTGCC +
Preference number: 5 (lower is better)
Translates to: GLTSQESASTLAKSRIIGPTMAM*ASFSAA
Trigger: GGCAGCCGAAAACGATGCCAACATCGCCATAGTGGG...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTCCTGCTCGGGTTGGGTaGGCTAACCCACCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTPARVG*ANPPEL
Trigger: GAGCTCAGGTGGGTTAGCCAACCCAACCCGAGCAGG...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000636345.1
CDS-3UTR CAA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTCAACCACTGCTCCAGTaGCACCAGGCGGCAAACTCT +
Preference number: 5 (lower is better)
Translates to: GLTSQESASTLAKSRIIGQPLLQ*HQAANS
Trigger: AGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTG...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GTGACCCTGGAAGGTCGGCTGTGCTGGGACTGCCTCCAACATAGAAAAAGTCATTCCCATCCACTGATATaGTCACCTGACGCAGATTCC +
Preference number: 5 (lower is better)
Translates to: VTLEGRLCWDCLQHRKSHSHPLI*SPDADS
Trigger: GGAATCTGCGTCAGGTGACAATATCAGTGGATGGGA...ATGACTTTTTCTATGTTGGAGGCAGTCCCAGCACAGCCGACCTTCCAGGGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626249.2
CDS-3UTR CAA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACGGCTCCGGCGGTGATTaGCGTTGTGATTTTTGTGTC +
Preference number: 5 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHGSGGD*RCDFCV
Trigger: GACACAAAAATCACAACGCAAATCACCGCCGGAGCC...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCGGCTCCGGCGGTGATTaGCGTTGTGATTTTTGTGTC +
Preference number: 5 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCGSGGD*RCDFCV
Trigger: GACACAAAAATCACAACGCAAATCACCGCCGGAGCC...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCCTCTCGATCTGTCCGTaGCAGAAAAGAGCATCGGAG +
Preference number: 5 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCLSICP*QKRASE
Trigger: CTCCGATGCTCTTTTCTGCAACGGACAGATCGAGAG...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTAGTCCTCTTGGCAGGTaGTGCTGGGCCCTTCACATC +
Preference number: 5 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTSPLGR*CWALHI
Trigger: GATGTGAAGGGCCCAGCACAACCTGCCAAGAGGACT...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGTCCTCTTGGCAGGTaGTGCTGGGCCCTTCACATC +
Preference number: 5 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKSPLGR*CWALHI
Trigger: GATGTGAAGGGCCCAGCACAACCTGCCAAGAGGACT...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACGTTGCGTGGTCTCACAAGTaGGATTTTACTTCTCTTTTC +
Preference number: 5 (lower is better)
Translates to: LDTDCVSPWSWTSQPPDVAWSHK*DFTSLF
Trigger: GAAAAGAGAAGTAAAATCCAACTTGTGAGACCACGC...AACGTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR CAA 90 bp AATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTGGGGAAGCGCGTCCATaGGCCCTCGGCGCCCGGAAA +
Preference number: 5 (lower is better)
Translates to: NSYFTLYQSHSTSILSFIGEARP*ALGARK
Trigger: TTTCCGGGCGCCGAGGGCCAATGGACGCGCTTCCCC...AATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CAA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTCGGGCGCTGCGAGTCTaGAGCTGGAAGCTCATCTCG +
Preference number: 5 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTRALRV*SWKLIS
Trigger: CGAGATGAGCTTCCAGCTCAAGACTCGCAGCGCCCG...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCCGGGCGCTGCGAGTCTaGAGCTGGAAGCTCATCTCG +
Preference number: 5 (lower is better)
Translates to: SMKQITPFVINTLAQPSSRALRV*SWKLIS
Trigger: CGAGATGAGCTTCCAGCTCAAGACTCGCAGCGCCCG...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCAGTCATGTCCCTGCGCTaGGACTTGACCTCCACCCAC +
Preference number: 5 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSVMSLR*DLTSTH
Trigger: GTGGGTGGAGGTCAAGTCCAAGCGCAGGGACATGAC...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTGTCATGTCCCTGCGCTaGGACTTGACCTCCACCCAC +
Preference number: 5 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCVMSLR*DLTSTH
Trigger: GTGGGTGGAGGTCAAGTCCAAGCGCAGGGACATGAC...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGAGGCCAGGGTGAGCTaGAGCGCCGCGGCGCGCAGT +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKEARVS*SAAARS
Trigger: ACTGCGCGCCGCGGCGCTCAAGCTCACCCTGGCCTC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCTTTAAAATGGACAGTTGAAACCACCGCCCCCAAACAAATACATTTAAGTCATGAGGCCAGGGTGAGCTaGAGCGCCGCGGCGCGCAGT +
Preference number: 5 (lower is better)
Translates to: SLKWTVETTAPKQIHLSHEARVS*SAAARS
Trigger: ACTGCGCGCCGCGGCGCTCAAGCTCACCCTGGCCTC...ATGACTTAAATGTATTTGTTTGGGGGCGGTGGTTTCAACTGTCCATTTTAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp CACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCTCACGAATCCACCCCTaGAAGGGCTCCCGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: HFVPVSQHFHSVIHSNLPSRIHP*KGSRSL
Trigger: GAGGGAGCGGGAGCCCTTCAAGGGGTGGATTCGTGA...GGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGGAGCACACACCTCCGTaGAGGCACACCCCGCCCTCG +
Preference number: 5 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTEEHTPP*RHTPPS
Trigger: CGAGGGCGGGGTGTGCCTCAACGGAGGTGTGTGCTC...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp ATTTGCAGCCATATAATTTGCAAGCATTTGCCCATCCTTTGCAGTGATGGTTTGGAGCACACACCTCCGTaGAGGCACACCCCGCCCTCG +
Preference number: 5 (lower is better)
Translates to: ICSHIICKHLPILCSDGLEHTPP*RHTPPS
Trigger: CGAGGGCGGGGTGTGCCTCAACGGAGGTGTGTGCTC...CAAACCATCACTGCAAAGGATGGGCAAATGCTTGCAAATTATATGGCTGCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496792.3
CDS-3UTR CAA 90 bp TTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATGAGCACACACCTCCGTaGAGGCACACCCCGCCCTCG +
Preference number: 5 (lower is better)
Translates to: LYQSHSTSILSFILTCPNEHTPP*RHTPPS
Trigger: CGAGGGCGGGGTGTGCCTCAACGGAGGTGTGTGCTC...ATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCTCTTGGCTGCAGTCCTaGCCGCGGAAGCCGGTTCGC +
Preference number: 5 (lower is better)
Translates to: LQQPELRCRLTNFASITCSWLQS*PRKPVR
Trigger: GCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAGA...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AGCCATATAATTTGCAAGCATTTGCCCATCCTTTGCAGTGATGGTTTGAAAGCACCTTGGCTGCAGTCCTaGCCGCGGAAGCCGGTTCGC +
Preference number: 5 (lower is better)
Translates to: SHIICKHLPILCSDGLKAPWLQS*PRKPVR
Trigger: GCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAGG...TGCTTTCAAACCATCACTGCAAAGGATGGGCAAATGCTTGCAAATTATATGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496792.3
CDS-3UTR CAA 90 bp AGCCATATAATTTGCAAGCATTTGCCCATCCTTTGCAGTGATGGTTTGAAAGCACAGGTGCGCCAGACCTaGGCTGCAGTCCTTGCCGCG +
Preference number: 5 (lower is better)
Translates to: SHIICKHLPILCSDGLKAQVRQT*AAVLAA
Trigger: CGCGGCAAGGACTGCAGCCAAGGTCTGGCGCACCTG...TGCTTTCAAACCATCACTGCAAAGGATGGGCAAATGCTTGCAAATTATATGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496792.3
CDS-3UTR CAA 90 bp CAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCCTCTTTACTTTTACCTaGGTCGCCCATCATCAGGTG +
Preference number: 5 (lower is better)
Translates to: QNLTGHRLCQPLVLDFPALFTFT*VAHHQV
Trigger: CACCTGATGATGGGCGACCAAGGTAAAAGTAAAGAG...GGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636066.1
CDS-3UTR CAA 90 bp TCATCTGTGGTCTGGCTAATGGGTTCTTTTGTCGGGGGCTTTCCTCTTCTGGCTGCTCTTGTTCCTGCCTaGTCTAGCATCTGGATGCAG +
Preference number: 5 (lower is better)
Translates to: SSVVWLMGSFVGGFPLLAALVPA*SSIWMQ
Trigger: CTGCATCCAGATGCTAGACAAGGCAGGAACAAGAGC...AGCCAGAAGAGGAAAGCCCCCGACAAAAGAACCCATTAGCCAGACCACAGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS TCA 90 bp TGCGCCCTTCTGAAGGAAGTGGGAATCGAACGGCGGAAAGGCAGCTaGGAAGAAGATGCAGACGAAGGAGTAAGGGAGAGAAACAGAAAA +
Preference number: 5 (lower is better)
Translates to: CALLKEVGIERRKGS*EEDADEGVRERNRK
Trigger: TTTTCTGTTTCTCTCCCTTACTCCTTCGTCTGCATCTTCTTCTCAGCTGCCTTTCCGCCGTTCGATTCCCACTTCCTTCAGAAGGGCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000628364.2
CDS TCA 90 bp CCCAAGCCTGAAGAACTGTCCACTCGCACCAATACGGCTTCTTTCTaGACAGTGCTAAAACCTATGGCCAGTCTGTCTGCTCGTGTACTG +
Preference number: 5 (lower is better)
Translates to: PKPEELSTRTNTASF*TVLKPMASLSARVL
Trigger: CAGTACACGAGCAGACAGACTGGCCATAGGTTTTAGCACTGTTCAGAAAGAAGCCGTATTGGTGCGAGTGGACAGTTCTTCAGGCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000331040.9
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000630543.2
ENST00000635264.1
ENST00000636298.1
ENST00000637889.1
ENST00000637906.1
CDS GCA 90 bp CTCTTTAGGGCACCATTTCTTAACCCGAGGATAGCTTCAAAGGCCTaGTTCTTCTGTCATAGCATGGGCTTCAGCACCGCTGCAGCCAAA +
Preference number: 5 (lower is better)
Translates to: LFRAPFLNPRIASKA*FFCHSMGFSTAAAK
Trigger: TTTGGCTGCAGCGGTGCTGAAGCCCATGCTATGACAGAAGAAGCAGGCCTTTGAAGCTATCCTCGGGTTAAGAAATGGTGCCCTAAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000626899.1
ENST00000628515.2
ENST00000635310.1
ENST00000637511.1
CDS CCA 90 bp CATGGGCTTCAGCACCGCTGCAGCCAAAGCCTAATTCCTTGTGCGTaGTCTCACAAGTTGGATTTTACTTCTCTTTTCAGCCACGGCAAC +
Preference number: 5 (lower is better)
Translates to: HGLQHRCSQSLIPCA*SHKLDFTSLFSHGN
Trigger: GTTGCCGTGGCTGAAAAGAGAAGTAAAATCCAACTTGTGAGACCACGCACAAGGAATTAGGCTTTGGCTGCAGCGGTGCTGAAGCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000626899.1
ENST00000628515.2
ENST00000635310.1
ENST00000637511.1
CDS CCA 90 bp ATGGGCCTCATGATCCAATGCCCTTTCCACTTCACTCCTTCACAATaGCCGAAGAACCAAATTCAAGGCAAGGCCATCCAACAGGCCATC +
Preference number: 5 (lower is better)
Translates to: MGLMIQCPFHFTPSQ*PKNQIQGKAIQQAI
Trigger: GATGGCCTGTTGGATGGCCTTGCCTTGAATTTGGTTCTTCGGCCATTGTGAAGGAGTGAAGTGGAAAGGGCATTGGATCATGAGGCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636298.1
CDS-3UTR CAA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTACCTGCAACGTGGCATaGCCACCACTCCTCGTGAAA +
Preference number: 5 (lower is better)
Translates to: GLTSQESASTLAKSRIIGTCNVA*PPLLVK
Trigger: TTTCACGAGGAGTGGTGGCAATGCCACGTTGCAGGT...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GTTGACTCAGTTGTCATAGAGGAAGGCACTTCACCAACCAGTCTCACATTTCCCACCTGCAACGTGGCATaGCCACCACTCCTCGTGAAA +
Preference number: 5 (lower is better)
Translates to: VDSVVIEEGTSPTSLTFPTCNVA*PPLLVK
Trigger: TTTCACGAGGAGTGGTGGCAATGCCACGTTGCAGGT...GGGAAATGTGAGACTGGTTGGTGAAGTGCCTTCCTCTATGACAACTGAGTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR CAA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAACCTGCTCGGGTTGGGTaGGCTAACCCACCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEPARVG*ANPPEL
Trigger: GAGCTCAGGTGGGTTAGCCAACCCAACCCGAGCAGG...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000636345.1
ENST00000637906.1
CDS-3UTR CAA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGTGCCGCCTGCTCGGGTaGGGTTGGCTAACCCACCTG +
Preference number: 5 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMCRLLG*GWLTHL
Trigger: CAGGTGGGTTAGCCAACCCAACCCGAGCAGGCGGCA...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000636345.1
ENST00000637906.1
CDS-3UTR CAA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTGGTTGCTGGTGTCCCTaGATATCATCACGTTGTGCC +
Preference number: 5 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLGCWCP*ISSRCA
Trigger: GGCACAACGTGATGATATCAAGGGACACCAGCAACC...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTCTCTCGATCTGTCCGTaGCAGAAAAGAGCATCGGAG +
Preference number: 5 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGLSICP*QKRASE
Trigger: CTCCGATGCTCTTTTCTGCAACGGACAGATCGAGAG...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCAGTCCTCTTGGCAGGTaGTGCTGGGCCCTTCACATC +
Preference number: 5 (lower is better)
Translates to: TSQESASTLAKSRIIGSFSPLGR*CWALHI
Trigger: GATGTGAAGGGCCCAGCACAACCTGCCAAGAGGACT...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCAGTCGTCCCAGGGTCATaGCAGAGTGGTCCACTGAAG +
Preference number: 5 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSVVPGS*QSGPLK
Trigger: CTTCAGTGGACCACTCTGCAATGACCCTGGGACGAC...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCACTCAAACCCAGCAGTaGCGAAATAGCCAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCTQTQQ*RNSQKL
Trigger: CAGCTTCTGGCTATTTCGCAACTGCTGGGTTTGAGT...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CAA 90 bp GAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGAAGGGAGGATGCACTTaGGAGACAACGTTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: EPGSKISLDTDCVSPWSWKGGCT*ETTFWK
Trigger: TTTCCAGAACGTTGTCTCCAAAGTGCATCCTCCCTT...CCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGGGGAAGCGCGTCCATaGGCCCTCGGCGCCCGGAAA +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKGEARP*ALGARK
Trigger: TTTCCGGGCGCCGAGGGCCAATGGACGCGCTTCCCC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CAGATGGCACAAGGTGGGGATATTCACATAAGACAGACTTGGATTGATGTTATGCGGGCGCTGCGAGTCTaGAGCTGGAAGCTCATCTCG +
Preference number: 5 (lower is better)
Translates to: QMAQGGDIHIRQTWIDVMRALRV*SWKLIS
Trigger: CGAGATGAGCTTCCAGCTCAAGACTCGCAGCGCCCG...CATAACATCAATCCAAGTCTGTCTTATGTGAATATCCCCACCTTGTGCCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCATGAAGAGCGTGGTGTaGCGGAACTGGCGGCGGATG +
Preference number: 5 (lower is better)
Translates to: SMKQITPFVINTLAQPSSMKSVV*RNWRRM
Trigger: CATCCGCCGCCAGTTCCGCAACACCACGCTCTTCAT...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTATGAAGAGCGTGGTGTaGCGGAACTGGCGGCGGATG +
Preference number: 5 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTMKSVV*RNWRRM
Trigger: CATCCGCCGCCAGTTCCGCAACACCACGCTCTTCAT...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTATCCCTGCGCTTGGACTaGACCTCCACCCACTTGGCC +
Preference number: 5 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLSLRLD*TSTHLA
Trigger: GGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGGA...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GACTTCCCAGCCTCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACTCCCTGCGCTTGGACTaGACCTCCACCCACTTGGCC +
Preference number: 5 (lower is better)
Translates to: DFPASRRLRNKFLLLTSYSLRLD*TSTHLA
Trigger: GGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGGA...GTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGAGGCTGGGAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TATTTAATTTGCAGCCATATAATTTGCAAGCATTTGCCCATCCTTTGCAGTGATGAGGCCAGGGTGAGCTaGAGCGCCGCGGCGCGCAGT +
Preference number: 5 (lower is better)
Translates to: YLICSHIICKHLPILCSDEARVS*SAAARS
Trigger: ACTGCGCGCCGCGGCGCTCAAGCTCACCCTGGCCTC...ATCACTGCAAAGGATGGGCAAATGCTTGCAAATTATATGGCTGCAAATTAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496792.3
CDS-3UTR CAA 90 bp CCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGCGAGGCCAGGGTGAGCTaGAGCGCCGCGGCGCGCAGT +
Preference number: 5 (lower is better)
Translates to: PKTQQIPILYKVTIHNYSEARVS*SAAARS
Trigger: ACTGCGCGCCGCGGCGCTCAAGCTCACCCTGGCCTC...GCTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CAA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTAGGACCTGCGAGGAGTaGACCCTCACGTCACGAATC +
Preference number: 5 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCRTCEE*TLTSRI
Trigger: GATTCGTGACGTGAGGGTCAACTCCTCGCAGGTCCT...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACTTCCCCCGCCGCTGTaGGGCGGCTCATCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKLPPPL*GGSSSS
Trigger: GCTGGACGATGAGCCGCCCAACAGCGGCGGGGGAAG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCACATTGTTGTCTTCTaGGCTGCAGTCCTTGCCGCG +
Preference number: 5 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTHIVVF*AAVLAA
Trigger: CGCGGCAAGGACTGCAGCCAAGAAGACAACAATGTG...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTAGACCTTCCACATTGTaGTCTTCTTGGCTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVRPSTL*SSWLQS
Trigger: GGACTGCAGCCAAGAAGACAACAATGTGGAAGGTCT...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCCTTTGCATCGTCCCCTaGCAGGGGGAGCCTGATCCT +
Preference number: 5 (lower is better)
Translates to: HFVPVSQHFHSVIHSNLPLCIVP*QGEPDP
Trigger: AGGATCAGGCTCCCCCTGCAAGGGGACGATGCAAAG...GGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS-3UTR CAA 90 bp CTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACGTTCTGACTTCGCCATTTTaGTCATGTACACATGATAAG +
Preference number: 5 (lower is better)
Translates to: LDTDCVSPWSWTSQPPDVLTSPF*SCTHDK
Trigger: CTTATCATGTGTACATGACAAAAATGGCGAAGTCAG...AACGTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
CDS GCA 90 bp ATAGCATGGGCTTCAGCACCGCTGCAGCCAAAGCCTAATTCCTTGTaGGTGGTCTCACAAGTTGGATTTTACTTCTCTTTTCAGCCACGG +
Preference number: 5 (lower is better)
Translates to: IAWASAPLQPKPNSL*VVSQVGFYFSFQPR
Trigger: CCGTGGCTGAAAAGAGAAGTAAAATCCAACTTGTGAGACCACGCACAAGGAATTAGGCTTTGGCTGCAGCGGTGCTGAAGCCCATGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000626899.1
ENST00000628515.2
ENST00000635310.1
ENST00000637511.1
CDS GCA 90 bp GTAAGATGCCAACTTGCAGACGACGATCAACTGTGTCTGACAAGGTaGTTTTTACTGCAGCCTGTCGTCATTCTCCAGCCTTCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: VRCQLADDDQLCLTR*FLLQPVVILQPSVL
Trigger: GAGCACAGAAGGCTGGAGAATGACGACAGGCTGCAGTAAAAAGCACCTTGTCAGACACAGTTGATCGTCGTCTGCAAGTTGGCATCTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635126.1
CDS-3UTR CAA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCACCTGCAACGTGGCATaGCCACCACTCCTCGTGAAA +
Preference number: 5 (lower is better)
Translates to: TSQESASTLAKSRIIGSFTCNVA*PPLLVK
Trigger: TTTCACGAGGAGTGGTGGCAATGCCACGTTGCAGGT...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCCCCACTATGGCGATGTaGGCATCGTTTTCGGCTGCC +
Preference number: 5 (lower is better)
Translates to: SMKQITPFVINTLAQPSSPTMAM*ASFSAA
Trigger: GGCAGCCGAAAACGATGCCAACATCGCCATAGTGGG...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTTTACAACAGCCCCATaGGACTGTGCTGAGTTACTG +
Preference number: 5 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHFTTAP*DCAELL
Trigger: CAGTAACTCAGCACAGTCCAATGGGGCTGTTGTAAA...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTTTTACAACAGCCCCATaGGACTGTGCTGAGTTACTG +
Preference number: 5 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVFTTAP*DCAELL
Trigger: CAGTAACTCAGCACAGTCCAATGGGGCTGTTGTAAA...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCTTTCGCACTGCTGGGTaGTTTCTCCTTTACAACAGC +
Preference number: 5 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCFRTAG*FLLYNS
Trigger: GCTGTTGTAAAGGAGAAACAACCCAGCAGTGCGAAA...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCTGCTGTAGTACTCCTTaGCTTTATGAATGCGTGCGG +
Preference number: 5 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLCCSTP*LYECVR
Trigger: CCGCACGCATTCATAAAGCAAAGGAGTACTACAGCA...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTGGAGTACGCAACGTGTaGACAGAAATGGTACCTGAC +
Preference number: 5 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGGVRNV*TEMVPD
Trigger: GTCAGGTACCATTTCTGTCAACACGTTGCGTACTCC...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCTCCCTGCACATGCCATaGTTTTTGCAAGGGTTGCTA +
Preference number: 5 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCSLHMP*FLQGLL
Trigger: TAGCAACCCTTGCAAAAACAATGGCATGTGCAGGGA...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCATAGCTCAAAACCGTaGCCTCTCTCTCACAGGACC +
Preference number: 5 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTHSSKP*PLSHRT
Trigger: GGTCCTGTGAGAGAGAGGCAACGGTTTTGAGCTATG...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAGGTTGCTGGTGTCCCTaGATATCATCACGTTGTGCC +
Preference number: 5 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKGCWCP*ISSRCA
Trigger: GGCACAACGTGATGATATCAAGGGACACCAGCAACC...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCTTTACAGTGTGGAGGTaGCTGGTGTCCCTTGATATC +
Preference number: 5 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLFTVWR*LVSLDI
Trigger: GATATCAAGGGACACCAGCAACCTCCACACTGTAAA...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAAGCCATCCCATTGTaGCAAGCACACACCTTGATT +
Preference number: 5 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVEAIPL*QAHTLI
Trigger: AATCAAGGTGTGTGCTTGCAACAATGGGATGGCTTC...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACCCAAAGCCTAATTCCTaGTGCGTGGTCTCACAAGTT +
Preference number: 5 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHPKPNS*CVVSQV
Trigger: AACTTGTGAGACCACGCACAAGGAATTAGGCTTTGG...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CAA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAGTGAGCCAGTATCCTaGGATGCTTGTGAATGCCTC +
Preference number: 5 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLSEPVS*DACECL
Trigger: GAGGCATTCACAAGCATCCAAGGATACTGGCTCACT...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CAA 90 bp CCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGCGGGGAAGCGCGTCCATaGGCCCTCGGCGCCCGGAAA +
Preference number: 5 (lower is better)
Translates to: PKTQQIPILYKVTIHNYSGEARP*ALGARK
Trigger: TTTCCGGGCGCCGAGGGCCAATGGACGCGCTTCCCC...GCTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CAA 90 bp TTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCAGCAGGCGTTCCACTaGGGGAAGCGCGTCCATTGG +
Preference number: 5 (lower is better)
Translates to: FTLYQSHSTSILSFILTCQQAFH*GKRVHW
Trigger: CCAATGGACGCGCTTCCCCAAGTGGAACGCCTGCTG...GCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAACGGGCGCTGCGAGTCTaGAGCTGGAAGCTCATCTCG +
Preference number: 5 (lower is better)
Translates to: FVPVSQHFHSVIHSNLPKRALRV*SWKLIS
Trigger: CGAGATGAGCTTCCAGCTCAAGACTCGCAGCGCCCG...TTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGAATGAAGAGCGTGGTGTaGCGGAACTGGCGGCGGATG +
Preference number: 5 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGMKSVV*RNWRRM
Trigger: CATCCGCCGCCAGTTCCGCAACACCACGCTCTTCAT...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGATTGACCTCCACCCACTaGGCCTCCACCTGGTCGATG +
Preference number: 5 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGLTSTH*ASTWSM
Trigger: CATCGACCAGGTGGAGGCCAAGTGGGTGGAGGTCAA...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATTCCCTGCGCTTGGACTaGACCTCCACCCACTTGGCC +
Preference number: 5 (lower is better)
Translates to: LYQSHSTSILSFILTCPNSLRLD*TSTHLA
Trigger: GGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGGA...ATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCGTCATGTCCCTGCGCTaGGACTTGACCTCCACCCAC +
Preference number: 5 (lower is better)
Translates to: LQQPELRCRLTNFASITCVMSLR*DLTSTH
Trigger: GTGGGTGGAGGTCAAGTCCAAGCGCAGGGACATGAC...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CAACAGATGGCACAAGGTGGGGATATTCACATAAGACAGACTTGGATTGATGTTGTCATGTCCCTGCGCTaGGACTTGACCTCCACCCAC +
Preference number: 5 (lower is better)
Translates to: QQMAQGGDIHIRQTWIDVVMSLR*DLTSTH
Trigger: GTGGGTGGAGGTCAAGTCCAAGCGCAGGGACATGAC...AACATCAATCCAAGTCTGTCTTATGTGAATATCCCCACCTTGTGCCATCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGTCACGAATCCACCCCTaGAAGGGCTCCCGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTESRIHP*KGSRSL
Trigger: GAGGGAGCGGGAGCCCTTCAAGGGGTGGATTCGTGA...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCTCACGAATCCACCCCTaGAAGGGCTCCCGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: FTLYQSHSTSILSFILTCSRIHP*KGSRSL
Trigger: GAGGGAGCGGGAGCCCTTCAAGGGGTGGATTCGTGA...GCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TGCAGCCATATAATTTGCAAGCATTTGCCCATCCTTTGCAGTGATGGTTTGAAATCACGAATCCACCCCTaGAAGGGCTCCCGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: CSHIICKHLPILCSDGLKSRIHP*KGSRSL
Trigger: GAGGGAGCGGGAGCCCTTCAAGGGGTGGATTCGTGA...TTTCAAACCATCACTGCAAAGGATGGGCAAATGCTTGCAAATTATATGGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496792.3
CDS-3UTR CAA 90 bp ATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTCACGAATCCACCCCTaGAAGGGCTCCCGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: IPTSLCTSLTALPFCHSFSRIHP*KGSRSL
Trigger: GAGGGAGCGGGAGCCCTTCAAGGGGTGGATTCGTGA...GAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCAGGACCTGCGAGGAGTaGACCCTCACGTCACGAATC +
Preference number: 5 (lower is better)
Translates to: SMKQITPFVINTLAQPSSRTCEE*TLTSRI
Trigger: GATTCGTGACGTGAGGGTCAACTCCTCGCAGGTCCT...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCCTTCCCCCGCCGCTGTaGGGCGGCTCATCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSILPPPL*GGSSSS
Trigger: GCTGGACGATGAGCCGCCCAACAGCGGCGGGGGAAG...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AGATCTACTCTTCACAAAGAGAATAAGGCTTATGCACTTTCAGAATGTGTAACTCTTCCCCCGCCGCTGTaGGGCGGCTCATCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: RSTLHKENKAYALSECVTLPPPL*GGSSSS
Trigger: GCTGGACGATGAGCCGCCCAACAGCGGCGGGGGAAG...AGTTACACATTCTGAAAGTGCATAAGCCTTATTCTCTTTGTGAAGAGTAGATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGAGCACACACCTCCGTaGAGGCACACCCCGCCCTCG +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKEHTPP*RHTPPS
Trigger: CGAGGGCGGGGTGTGCCTCAACGGAGGTGTGTGCTC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTTCTTGGCTGCAGTCCTaGCCGCGGAAGCCGGTTCGC +
Preference number: 5 (lower is better)
Translates to: NSYFTLYQSHSTSILSFISWLQS*PRKPVR
Trigger: GCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAGA...AATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TCTATGAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTAGACCTTCCACATTGTaGTCTTCTTGGCTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: SMNQEAKSHWTPTVSALGRPSTL*SSWLQS
Trigger: GGACTGCAGCCAAGAAGACAACAATGTGGAAGGTCT...ACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTCATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCTCAGAGGCGTCAGGCTaGAGCGTCTATCTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: SMKQITPFVINTLAQPSSSEASG*SVYLQE
Trigger: CTCCTGGAGATAGACGCTCAAGCCTGACGCCTCTGA...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CAA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCCTTTACTTTTACCTaGGTCGCCCATCATCAGGTG +
Preference number: 5 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHSFTFT*VAHHQV
Trigger: CACCTGATGATGGGCGACCAAGGTAAAAGTAAAGGA...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACAAAGTAAGGTTGGCTTaGAATAACAGATCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: SLDTDCVSPWSWTSQPPDKVRLA*NNRSSA
Trigger: AGCTGAAGATCTGTTATTCAAAGCCAACCTTACTTT...GTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
CDS-3UTR CAA 90 bp CTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCTCCAGACGTTTTTCATGAAGACTATTaGAATCCATCTACCCACAAC +
Preference number: 5 (lower is better)
Translates to: LDTDCVSPWSWTSQPPDVFHEDY*NPSTHN
Trigger: GTTGTGGGTAGATGGATTCAAATAGTCTTCATGAAA...AACGTCTGGAGGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
CDS-3UTR CAA 90 bp CAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCGTTCAGGTGGAAGAGTaGTATCCAGGTCTTAACAAT +
Preference number: 5 (lower is better)
Translates to: QNLTGHRLCQPLVLDFPAVQVEE*YPGLNN
Trigger: ATTGTTAAGACCTGGATACAACTCTTCCACCTGAAC...GGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp CAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGACTTCCCAGCCCCAGCCTCCAGACGTTaGAGAAATAAGTTTCTGTTA +
Preference number: 5 (lower is better)
Translates to: QNLTGHRLCQPLVLDFPAPASRR*RNKFLL
Trigger: TAACAGAAACTTATTTCTCAAACGTCTGGAGGCTGG...GGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp GTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACACAGGACCGACTGTGTCAGCCCTaGGTCTTGGACTTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: VTGSCALHRQIRYIATQDRLCQP*VLDFPA
Trigger: GGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCG...GTCCTGTGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATGCCGCCTGCTCGGGTaGGGTTGGCTGAGCTCGGCT +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKCRLLG*GWLSSA
Trigger: AGCCGAGCTCAGCCAACCCAACCCGAGCAGGCGGCA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412315.5
ENST00000625672.2
ENST00000628364.2
ENST00000630656.1
CDS-3UTR CAA 90 bp GTGACCCTGGAAGGTCGGCTGTGCTGGGACTGCCTCCAACATAGAAAAAGTCATCAGAAAGGTGGATATTaGGAAGGAACAGTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: VTLEGRLCWDCLQHRKSHQKGGY*EGTVFS
Trigger: GGAGAAGACTGTTCCTTCCAAATATCCACCTTTCTG...ATGACTTTTTCTATGTTGGAGGCAGTCCCAGCACAGCCGACCTTCCAGGGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626249.2
CDS-3UTR CAA 90 bp GAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGTTCTTTACTTTTACCTaGGTCGCCCATCATCAGGTG +
Preference number: 5 (lower is better)
Translates to: EPGSKISLDTDCVSPWSWFFTFT*VAHHQV
Trigger: CACCTGATGATGGGCGACCAAGGTAAAAGTAAAGAA...CCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637511.1
CDS TCA 90 bp ATATACAACCTCTTTGAGACAGCCCATAAAGTTGTTACTGACTGGTaGCCCTGGAAGGTCGGCTGTGCTGGGACTGCCTCCAACATAGAA +
Preference number: 5 (lower is better)
Translates to: IYNLFETAHKVVTDW*PWKVGCAGTASNIE
Trigger: TTCTATGTTGGAGGCAGTCCCAGCACAGCCGACCTTCCAGGGTCACCAGTCAGTAACAACTTTATGGGCTGTCTCAAAGAGGTTGTATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331040.9
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
ENST00000630543.2
ENST00000636298.1
CDS GCA 90 bp TACGGCTTCTTTCTGAACAGTGCTAAAACCTATGGCCAGTCTGTCTaGTCGTGTACTGGGTCGGTCATTAGGAGGCCACTTATACGTGAT +
Preference number: 5 (lower is better)
Translates to: YGFFLNSAKTYGQSV*SCTGSVIRRPLIRD
Trigger: ATCACGTATAAGTGGCCTCCTAATGACCGACCCAGTACACGAGCAGACAGACTGGCCATAGGTTTTAGCACTGTTCAGAAAGAAGCCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000331040.9
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000611589.4
ENST00000625320.2
ENST00000625672.2
ENST00000628364.2
ENST00000630543.2
ENST00000635264.1
ENST00000636298.1
ENST00000637889.1
ENST00000637906.1
CDS-3UTR CAA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCACCCACTATGGCGATGTaGGCATCGTTTTCGGCTGCC +
Preference number: 5 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAPTMAM*ASFSAA
Trigger: GGCAGCCGAAAACGATGCCAACATCGCCATAGTGGG...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATGCCGCCTGCTCGGGTaGGGTTGGCTAACCCACCTG +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKCRLLG*GWLTHL
Trigger: CAGGTGGGTTAGCCAACCCAACCCGAGCAGGCGGCA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000611589.4
ENST00000636345.1
ENST00000637906.1
CDS-3UTR CAA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTTACAACAGCCCCATaGGACTGTGCTGAGTTACTG +
Preference number: 5 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGFTTAP*DCAELL
Trigger: CAGTAACTCAGCACAGTCCAATGGGGCTGTTGTAAA...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp CTGCTGGGTTGTTTCTCCTTTACAACAGCCCCATTGGACTGTGCTGAGTTACTGTTTACAACAGCCCCATaGGACTGTGCTGAGTTACTG +
Preference number: 5 (lower is better)
Translates to: LLGCFSFTTAPLDCAELLFTTAP*DCAELL
Trigger: CAGTAACTCAGCACAGTCCAATGGGGCTGTTGTAAA...CAGTAACTCAGCACAGTCCAATGGGGCTGTTGTAAAGGAGAAACAACCCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635519.1
ENST00000637906.1
CDS-3UTR CAA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTTTTCGCACTGCTGGGTaGTTTCTCCTTTACAACAGC +
Preference number: 5 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLFRTAG*FLLYNS
Trigger: GCTGTTGTAAAGGAGAAACAACCCAGCAGTGCGAAA...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GCTGTGCTAGTAGCCAGGGTCGTGGTAGTCTCCATAATTGATGTGGACATCTCTTGCTGTAGTACTCCTTaGCTTTATGAATGCGTGCGG +
Preference number: 5 (lower is better)
Translates to: AVLVARVVVVSIIDVDISCCSTP*LYECVR
Trigger: CCGCACGCATTCATAAAGCAAAGGAGTACTACAGCA...AGAGATGTCCACATCAATTATGGAGACTACCACGACCCTGGCTACTAGCACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR CAA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCGAAAGCGCTAGCACTTaGGCTAAATCCAGGATCATA +
Preference number: 5 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLESAST*AKSRII
Trigger: TATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTC...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACAACCACTGCTCCAGTaGCACCAGGCGGCAAACTCT +
Preference number: 5 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGQPLLQ*HQAANS
Trigger: AGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTG...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCCAACCACTGCTCCAGTaGCACCAGGCGGCAAACTCT +
Preference number: 5 (lower is better)
Translates to: LQQPELRCRLTNFASITCQPLLQ*HQAANS
Trigger: AGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTG...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAACAACCACTGCTCCAGTaGCACCAGGCGGCAAACTCT +
Preference number: 5 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEQPLLQ*HQAANS
Trigger: AGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTG...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCCCAGAAAGGGGCTTTTaGAATGTGTTCCTACACAAG +
Preference number: 5 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCPERGF*NVFLHK
Trigger: CTTGTGTAGGAACACATTCAAAAAGCCCCTTTCTGG...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCCCAGAAAGGGGCTTTTaGAATGTGTTCCTACACAAG +
Preference number: 5 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLPERGF*NVFLHK
Trigger: CTTGTGTAGGAACACATTCAAAAAGCCCCTTTCTGG...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTTAGGATCTCCTTGCTaGGCAAGTCGAGATAATTCC +
Preference number: 5 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHLGSPC*ASRDNS
Trigger: GGAATTATCTCGACTTGCCAAGCAAGGAGATCCTAA...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTCCGGATATCTTTGCTTaGGCCATCGATGAACAAATC +
Preference number: 5 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVPDIFA*AIDEQI
Trigger: GATTTGTTCATCGATGGCCAAAGCAAAGATATCCGG...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCATTTGCCGGATATCTTaGCTTTGGCCATCGATGAAC +
Preference number: 5 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCICRIS*LWPSMN
Trigger: GTTCATCGATGGCCAAAGCAAAGATATCCGGCAAAT...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTGTTTTGCTGTTTCCTTaGAGCAGGAAGGCTTCACTC +
Preference number: 5 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGVLLFP*SRKASL
Trigger: GAGTGAAGCCTTCCTGCTCAAAGGAAACAGCAAAAC...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTCACATGCCATTGTTTTaGCAAGGGTTGCTAAGGCAC +
Preference number: 5 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVHMPLF*QGLLRH
Trigger: GTGCCTTAGCAACCCTTGCAAAAACAATGGCATGTG...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCACATAGCTCAAAACCGTaGCCTCTCTCTCACAGGACC +
Preference number: 5 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSHSSKP*PLSHRT
Trigger: GGTCCTGTGAGAGAGAGGCAACGGTTTTGAGCTATG...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTGGTTGCTGGTGTCCCTaGATATCATCACGTTGTGCC +
Preference number: 5 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCGCWCP*ISSRCA
Trigger: GGCACAACGTGATGATATCAAGGGACACCAGCAACC...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTTTACAGTGTGGAGGTaGCTGGTGTCCCTTGATATC +
Preference number: 5 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVFTVWR*LVSLDI
Trigger: GATATCAAGGGACACCAGCAACCTCCACACTGTAAA...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTGGCTCCGGCGGTGATTaGCGTTGTGATTTTTGTGTC +
Preference number: 5 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSGSGGD*RCDFCV
Trigger: GACACAAAAATCACAACGCAAATCACCGCCGGAGCC...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTCTCGATCTGTCCGTaGCAGAAAAGAGCATCGGAG +
Preference number: 5 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSLSICP*QKRASE
Trigger: CTCCGATGCTCTTTTCTGCAACGGACAGATCGAGAG...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTGAAGCCATCCCATTGTaGCAAGCACACACCTTGATT +
Preference number: 5 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVEAIPL*QAHTLI
Trigger: AATCAAGGTGTGTGCTTGCAACAATGGGATGGCTTC...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTGATCAAGATGATAAATaGCCTGCGCATCAGCCCGGC +
Preference number: 5 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCDQDDK*PAHQPG
Trigger: GCCGGGCTGATGCGCAGGCAATTTATCATCTTGATC...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412315.5
CDS-3UTR CAA 90 bp GAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGCAGCACATCAATTGGTaGTGTGTTGGTGATGCATTT +
Preference number: 5 (lower is better)
Translates to: EPGSKISLDTDCVSPWSWQHINW*CVGDAF
Trigger: AAATGCATCACCAACACACAACCAATTGATGTGCTG...CCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR CAA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTCCAAAGCCTAATTCCTaGTGCGTGGTCTCACAAGTT +
Preference number: 5 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVPKPNS*CVVSQV
Trigger: AACTTGTGAGACCACGCACAAGGAATTAGGCTTTGG...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CAA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTAGTGAGCCAGTATCCTaGGATGCTTGTGAATGCCTC +
Preference number: 5 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTSEPVS*DACECL
Trigger: GAGGCATTCACAAGCATCCAAGGATACTGGCTCACT...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CAA 90 bp GTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATGTTTTCATCGGGCGCTGCGAGTCTaGAGCTGGAAGCTCATCTCG +
Preference number: 5 (lower is better)
Translates to: VSQHFHSVIHSNLPKCFHRALRV*SWKLIS
Trigger: CGAGATGAGCTTCCAGCTCAAGACTCGCAGCGCCCG...ATGAAAACATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CAA 90 bp ATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCATGAAGAGCGTGGTGTaGCGGAACTGGCGGCGGATG +
Preference number: 5 (lower is better)
Translates to: IPTSLCTSLTALPFCHSFMKSVV*RNWRRM
Trigger: CATCCGCCGCCAGTTCCGCAACACCACGCTCTTCAT...GAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CAA 90 bp CCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATGTTTTTTGACCTCCACCCACTaGGCCTCCACCTGGTCGATG +
Preference number: 5 (lower is better)
Translates to: PVSQHFHSVIHSNLPKCFLTSTH*ASTWSM
Trigger: CATCGACCAGGTGGAGGCCAAGTGGGTGGAGGTCAA...AAAACATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CAA 90 bp AATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTTCCCTGCGCTTGGACTaGACCTCCACCCACTTGGCC +
Preference number: 5 (lower is better)
Translates to: NSYFTLYQSHSTSILSFISLRLD*TSTHLA
Trigger: GGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGGA...AATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CAA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAAGGACCTGCGAGGAGTaGACCCTCACGTCACGAATC +
Preference number: 5 (lower is better)
Translates to: AVVLLCFMNACGHHCLLERTCEE*TLTSRI
Trigger: GATTCGTGACGTGAGGGTCAACTCCTCGCAGGTCCT...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCGAGCACACACCTCCGTaGAGGCACACCCCGCCCTCG +
Preference number: 5 (lower is better)
Translates to: CNNIISVHENFPMIASMPEHTPP*RHTPPS
Trigger: CGAGGGCGGGGTGTGCCTCAACGGAGGTGTGTGCTC...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTGAGCACACACCTCCGTaGAGGCACACCCCGCCCTCG +
Preference number: 5 (lower is better)
Translates to: LSPKPNKFQSYTKLQYTTEHTPP*RHTPPS
Trigger: CGAGGGCGGGGTGTGCCTCAACGGAGGTGTGTGCTC...AGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CAA 90 bp ATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACAGAGCACACACCTCCGTaGAGGCACACCCCGCCCTCG +
Preference number: 5 (lower is better)
Translates to: ILVTGSCALHRQIRYIATEHTPP*RHTPPS
Trigger: CGAGGGCGGGGTGTGCCTCAACGGAGGTGTGTGCTC...TGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATCTTGGCTGCAGTCCTaGCCGCGGAAGCCGGTTCGC +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKSWLQS*PRKPVR
Trigger: GCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAGA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCTTTAAAATGGACAGTTGAAACCACCGCCCCCAAACAAATACATTTAAGTCATTCTTGGCTGCAGTCCTaGCCGCGGAAGCCGGTTCGC +
Preference number: 5 (lower is better)
Translates to: SLKWTVETTAPKQIHLSHSWLQS*PRKPVR
Trigger: GCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAGA...ATGACTTAAATGTATTTGTTTGGGGGCGGTGGTTTCAACTGTCCATTTTAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TGTTTAATTCATTGTGATTCTGCCAGCCCACAGCAGTGGTCTCTAACATGTCTCCACATTGTTGTCTTCTaGGCTGCAGTCCTTGCCGCG +
Preference number: 5 (lower is better)
Translates to: CLIHCDSASPQQWSLTCLHIVVF*AAVLAA
Trigger: CGCGGCAAGGACTGCAGCCAAGAAGACAACAATGTG...GAGACATGTTAGAGACCACTGCTGTGGGCTGGCAGAATCACAATGAATTAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
CDS-3UTR CAA 90 bp ACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCATCAGAGGCGTCAGGCTaGAGCGTCTATCTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: TLYQSHSTSILSFILTCPSEASG*SVYLQE
Trigger: CTCCTGGAGATAGACGCTCAAGCCTGACGCCTCTGA...TGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR CAA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTCCTTTACTTTTACCTaGGTCGCCCATCATCAGGTG +
Preference number: 5 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGSFTFT*VAHHQV
Trigger: CACCTGATGATGGGCGACCAAGGTAAAAGTAAAGGA...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGCATATCTGATGGATaGCTGTGGATTCGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCSISDG*LWIRVC
Trigger: ACACACACGAATCCACAGCAATCCATCAGATATGCT...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAGCATATCTGATGGATaGCTGTGGATTCGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLSISDG*LWIRVC
Trigger: ACACACACGAATCCACAGCAATCCATCAGATATGCT...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTCTACTGTATGCACGTTaGGATCTTCCAGCATATCTG +
Preference number: 5 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVLLYAR*DLPAYL
Trigger: CAGATATGCTGGAAGATCCAAACGTGCATACAGTAG...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTAGCAAATCACCCCATTaGTCATCAATACCTTGGCAC +
Preference number: 5 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVSKSPH*SSIPWH
Trigger: GTGCCAAGGTATTGATGACAAATGGGGTGATTTGCT...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAGCAAATCACCCCATTaGTCATCAATACCTTGGCAC +
Preference number: 5 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLSKSPH*SSIPWH
Trigger: GTGCCAAGGTATTGATGACAAATGGGGTGATTTGCT...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACAGCAAATCACCCCATTaGTCATCAATACCTTGGCAC +
Preference number: 5 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHSKSPH*SSIPWH
Trigger: GTGCCAAGGTATTGATGACAAATGGGGTGATTTGCT...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS GCA 90 bp CAGCTCCTCTTCTTTTCTCTCTGCCTCTGCAGGGCCAAGCTAAGATaGCAGCACATCAATTGGTTGTGTGTTGGTGATGCATTTTGGTTT +
Preference number: 5 (lower is better)
Translates to: QLLFFSLCLCRAKLR*QHINWLCVGDAFWF
Trigger: AAACCAAAATGCATCACCAACACACAACCAATTGATGTGCTGGCATCTTAGCTTGGCCCTGCAGAGGCAGAGAGAAAAGAAGAGGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000626899.1
ENST00000628515.2
ENST00000635310.1
ENST00000637511.1
CDS GCA 90 bp ATCAACATCAACTCTTTACTTTTACCTTGGTCGCCCATCATCAGGTaGGCCAGACCTTCCACATTGTTGTCTTCTTGGCTGCAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: ININSLLLPWSPIIR*ARPSTLLSSWLQSL
Trigger: CAAGGACTGCAGCCAAGAAGACAACAATGTGGAAGGTCTGGCGCACCTGATGATGGGCGACCAAGGTAAAAGTAAAGAGTTGATGTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636066.1
CDS CCA 90 bp CTTTTCTCAAGAAAGTACAGGAAGCCAGCAGTGAGCCAGTATCCTTaGATGCTTGTGAATGCCTCAAGTCTGTCTCCTTCAGATGTGGTG +
Preference number: 5 (lower is better)
Translates to: LFSRKYRKPAVSQYP*MLVNASSLSPSDVV
Trigger: CACCACATCTGAAGGAGACAGACTTGAGGCATTCACAAGCATCCAAGGATACTGGCTCACTGCTGGCTTCCTGTACTTTCTTGAGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000626899.1
ENST00000628515.2
ENST00000635310.1
ENST00000637511.1
CDS CCA 90 bp GAGTATCAGTCCATACTCAGAGAGGTACTTACGGTCATTGCAGAGTaGTCCACTGAAGGAAGTCATACTACAGTCACAGCTGAAGCCATC +
Preference number: 5 (lower is better)
Translates to: EYQSILREVLTVIAE*STEGSHTTVTAEAI
Trigger: GATGGCTTCAGCTGTGACTGTAGTATGACTTCCTTCAGTGGACCACTCTGCAATGACCGTAAGTACCTCTCTGAGTATGGACTGATACTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462791.2
ENST00000626192.1
CDS-3UTR CAA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCCCACTTATACGTGATTaGTCCACCACCTTTGCTAAA +
Preference number: 5 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLPLIRD*STTFAK
Trigger: TTTAGCAAAGGTGGTGGACAAATCACGTATAAGTGG...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAACCTGCAACGTGGCATaGCCACCACTCCTCGTGAAA +
Preference number: 5 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLATCNVA*PPLLVK
Trigger: TTTCACGAGGAGTGGTGGCAATGCCACGTTGCAGGT...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAACCTGCTCGGGTTGGGTaGGCTAACCCACCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKPARVG*ANPPEL
Trigger: GAGCTCAGGTGGGTTAGCCAACCCAACCCGAGCAGG...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000636345.1
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACCTGCTCGGGTTGGGTaGGCTAACCCACCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKPARVG*ANPPEL
Trigger: GAGCTCAGGTGGGTTAGCCAACCCAACCCGAGCAGG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000611589.4
ENST00000636345.1
ENST00000637906.1
CDS-3UTR CAA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCATGCCGCCTGCTCGGGTaGGGTTGGCTAACCCACCTG +
Preference number: 5 (lower is better)
Translates to: CRLTNFASITCPHNGSYSCRLLG*GWLTHL
Trigger: CAGGTGGGTTAGCCAACCCAACCCGAGCAGGCGGCA...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000636345.1
CDS-3UTR CAA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTTTTACAACAGCCCCATaGGACTGTGCTGAGTTACTG +
Preference number: 5 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTFTTAP*DCAELL
Trigger: CAGTAACTCAGCACAGTCCAATGGGGCTGTTGTAAA...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTTTTACAACAGCCCCATaGGACTGTGCTGAGTTACTG +
Preference number: 5 (lower is better)
Translates to: GLTSQESASTLAKSRIIGFTTAP*DCAELL
Trigger: CAGTAACTCAGCACAGTCCAATGGGGCTGTTGTAAA...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp AGTTGTCATAGAGGAAGGCACTTCACCAACCAGTCTCACATTTCCCACTATGGCTTTCGCACTGCTGGGTaGTTTCTCCTTTACAACAGC +
Preference number: 5 (lower is better)
Translates to: SCHRGRHFTNQSHISHYGFRTAG*FLLYNS
Trigger: GCTGTTGTAAAGGAGAAACAACCCAGCAGTGCGAAA...GCCATAGTGGGAAATGTGAGACTGGTTGGTGAAGTGCCTTCCTCTATGACAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR CAA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCGTTTTGTGTTGGTTTTaGTGTTGTGCCTTGATGCTG +
Preference number: 5 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCVLCWF*CCALML
Trigger: CAGCATCAAGGCACAACACAAAAACCAACACAAAAC...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTTTAAAGGTTTGCAGGTaGAGTCACTCAAAAGGACAG +
Preference number: 5 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVLKVCR*SHSKGQ
Trigger: CTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTGTTTTGCTGTTTCCTTaGAGCAGGAAGGCTTCACTC +
Preference number: 5 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTVLLFP*SRKASL
Trigger: GAGTGAAGCCTTCCTGCTCAAAGGAAACAGCAAAAC...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTTTGTTTTTGCAAGGGTaGCTAAGGCACGGTTTTGCT +
Preference number: 5 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLLFLQG*LRHGFA
Trigger: AGCAAAACCGTGCCTTAGCAACCCTTGCAAAAACAA...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTCACATGCCATTGTTTTaGCAAGGGTTGCTAAGGCAC +
Preference number: 5 (lower is better)
Translates to: GLTSQESASTLAKSRIIGHMPLF*QGLLRH
Trigger: GTGCCTTAGCAACCCTTGCAAAAACAATGGCATGTG...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTTCCCTGCACATGCCATaGTTTTTGCAAGGGTTGCTA +
Preference number: 5 (lower is better)
Translates to: GLTSQESASTLAKSRIIGSLHMP*FLQGLL
Trigger: TAGCAACCCTTGCAAAAACAATGGCATGTGCAGGGA...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCAATGATCACCTGCCATTaGACCTGTCATGGCCTGTTG +
Preference number: 5 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSMITCH*TCHGLL
Trigger: CAACAGGCCATGACAGGTCAAATGGCAGGTGATCAT...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCGGCTCCGGCGGTGATTaGCGTTGTGATTTTTGTGTC +
Preference number: 5 (lower is better)
Translates to: SMKQITPFVINTLAQPSSGSGGD*RCDFCV
Trigger: GACACAAAAATCACAACGCAAATCACCGCCGGAGCC...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGGTCGTCCCAGGGTCATaGCAGAGTGGTCCACTGAAG +
Preference number: 5 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMVVPGS*QSGPLK
Trigger: CTTCAGTGGACCACTCTGCAATGACCCTGGGACGAC...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGATCAAGATGATAAATaGCCTGCGCATCAGCCCGGC +
Preference number: 5 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTDQDDK*PAHQPG
Trigger: GCCGGGCTGATGCGCAGGCAATTTATCATCTTGATC...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378262.7
ENST00000412315.5
CDS-3UTR CAA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCAGTGAGCCAGTATCCTaGGATGCTTGTGAATGCCTC +
Preference number: 5 (lower is better)
Translates to: TSQESASTLAKSRIIGSFSEPVS*DACECL
Trigger: GAGGCATTCACAAGCATCCAAGGATACTGGCTCACT...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACAGCAGGCGTTCCACTaGGGGAAGCGCGTCCATTGG +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKQQAFH*GKRVHW
Trigger: CCAATGGACGCGCTTCCCCAAGTGGAACGCCTGCTG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CTTGAGAGGAGGATGAAGAAGGTTATCAAAAGGCATGTTCTTTTTACATGTGTTCAGCAGGCGTTCCACTaGGGGAAGCGCGTCCATTGG +
Preference number: 5 (lower is better)
Translates to: LERRMKKVIKRHVLFTCVQQAFH*GKRVHW
Trigger: CCAATGGACGCGCTTCCCCAAGTGGAACGCCTGCTG...AACACATGTAAAAAGAACATGCCTTTTGATAACCTTCTTCATCCTCCTCTCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACGGGCGCTGCGAGTCTaGAGCTGGAAGCTCATCTCG +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKRALRV*SWKLIS
Trigger: CGAGATGAGCTTCCAGCTCAAGACTCGCAGCGCCCG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATGAAGAGCGTGGTGTaGCGGAACTGGCGGCGGATG +
Preference number: 5 (lower is better)
Translates to: SFQLQQPELRCRLTNFASMKSVV*RNWRRM
Trigger: CATCCGCCGCCAGTTCCGCAACACCACGCTCTTCAT...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTTTGACCTCCACCCACTaGGCCTCCACCTGGTCGATG +
Preference number: 5 (lower is better)
Translates to: NSYFTLYQSHSTSILSFILTSTH*ASTWSM
Trigger: CATCGACCAGGTGGAGGCCAAGTGGGTGGAGGTCAA...AATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATCCCTGCGCTTGGACTaGACCTCCACCCACTTGGCC +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKSLRLD*TSTHLA
Trigger: GGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGGA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATCACGAATCCACCCCTaGAAGGGCTCCCGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKSRIHP*KGSRSL
Trigger: GAGGGAGCGGGAGCCCTTCAAGGGGTGGATTCGTGA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAATCACGAATCCACCCCTaGAAGGGCTCCCGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKSRIHP*KGSRSL
Trigger: GAGGGAGCGGGAGCCCTTCAAGGGGTGGATTCGTGA...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACTCACGAATCCACCCCTaGAAGGGCTCCCGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: DFSNWKLCTSQTNSLYSNSRIHP*KGSRSL
Trigger: GAGGGAGCGGGAGCCCTTCAAGGGGTGGATTCGTGA...GTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp CCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATGTTTTAGGACCTGCGAGGAGTaGACCCTCACGTCACGAATC +
Preference number: 5 (lower is better)
Translates to: PVSQHFHSVIHSNLPKCFRTCEE*TLTSRI
Trigger: GATTCGTGACGTGAGGGTCAACTCCTCGCAGGTCCT...AAAACATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TGCAGCCATATAATTTGCAAGCATTTGCCCATCCTTTGCAGTGATGGTTTGAAAAGGACCTGCGAGGAGTaGACCCTCACGTCACGAATC +
Preference number: 5 (lower is better)
Translates to: CSHIICKHLPILCSDGLKRTCEE*TLTSRI
Trigger: GATTCGTGACGTGAGGGTCAACTCCTCGCAGGTCCT...TTTCAAACCATCACTGCAAAGGATGGGCAAATGCTTGCAAATTATATGGCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496792.3
CDS-3UTR CAA 90 bp TTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCAGGACCTGCGAGGAGTaGACCCTCACGTCACGAATC +
Preference number: 5 (lower is better)
Translates to: FTLYQSHSTSILSFILTCRTCEE*TLTSRI
Trigger: GATTCGTGACGTGAGGGTCAACTCCTCGCAGGTCCT...GCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000626899.1
ENST00000675235.1
CDS-3UTR CAA 90 bp AGATCTACTCTTCACAAAGAGAATAAGGCTTATGCACTTTCAGAATGTGTAACTTCTTGGCTGCAGTCCTaGCCGCGGAAGCCGGTTCGC +
Preference number: 5 (lower is better)
Translates to: RSTLHKENKAYALSECVTSWLQS*PRKPVR
Trigger: GCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAGA...AGTTACACATTCTGAAAGTGCATAAGCCTTATTCTCTTTGTGAAGAGTAGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCTCTTGGCTGCAGTCCTaGCCGCGGAAGCCGGTTCGC +
Preference number: 5 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSISWLQS*PRKPVR
Trigger: GCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAGA...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCCACATTGTTGTCTTCTaGGCTGCAGTCCTTGCCGCG +
Preference number: 5 (lower is better)
Translates to: LQQPELRCRLTNFASITCHIVVF*AAVLAA
Trigger: CGCGGCAAGGACTGCAGCCAAGAAGACAACAATGTG...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACACATTGTTGTCTTCTaGGCTGCAGTCCTTGCCGCG +
Preference number: 5 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGHIVVF*AAVLAA
Trigger: CGCGGCAAGGACTGCAGCCAAGAAGACAACAATGTG...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GACTTCCCAGCCTCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACCACATTGTTGTCTTCTaGGCTGCAGTCCTTGCCGCG +
Preference number: 5 (lower is better)
Translates to: DFPASRRLRNKFLLLTSYHIVVF*AAVLAA
Trigger: CGCGGCAAGGACTGCAGCCAAGAAGACAACAATGTG...GTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGAGGCTGGGAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTAGACCTTCCACATTGTaGTCTTCTTGGCTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCRPSTL*SSWLQS
Trigger: GGACTGCAGCCAAGAAGACAACAATGTGGAAGGTCT...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGCCAGACCTTCCACATaGTTGTCTTCTTGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTARPST*LSSWLQ
Trigger: CTGCAGCCAAGAAGACAACAATGTGGAAGGTCTGGC...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCGCCAGACCTTCCACATaGTTGTCTTCTTGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: HFVPVSQHFHSVIHSNLPARPST*LSSWLQ
Trigger: CTGCAGCCAAGAAGACAACAATGTGGAAGGTCTGGC...GGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR CAA 90 bp TGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCTCCCATCCACTGATATaGTCACCGAACAATGTAGTT +
Preference number: 5 (lower is better)
Translates to: CSSCTRRQTLKGLQVESLSHPLI*SPNNVV
Trigger: AACTACATTGTTCGGTGACAATATCAGTGGATGGGA...GAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404971.5
CDS-3UTR CAA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTCTACTGTATGCACGTTaGGATCTTCCAGCATATCTG +
Preference number: 5 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGLLYAR*DLPAYL
Trigger: CAGATATGCTGGAAGATCCAAACGTGCATACAGTAG...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTTTTGTCATCAATACCTaGGCACAACCCTCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLFVINT*AQPSSF
Trigger: GAAGGAAGAGGGTTGTGCCAAGGTATTGATGACAAA...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GTTGGAGCTTTTCGCACTGCTGGGTTGTTTCTCCTTTACAACAGCCCCATTGGAAGCAAATCACCCCATTaGTCATCAATACCTTGGCAC +
Preference number: 5 (lower is better)
Translates to: VGAFRTAGLFLLYNSPIGSKSPH*SSIPWH
Trigger: GTGCCAAGGTATTGATGACAAATGGGGTGATTTGCT...TCCAATGGGGCTGTTGTAAAGGAGAAACAACCCAGCAGTGCGAAAAGCTCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635519.1
CDS-3UTR CAA 90 bp ACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAGCAAGCGCTTCTAACTaGTCACCACCCTCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: TLYQSHSTSILSFILTCPASASN*SPPSLP
Trigger: GGGAAGAGAGGGTGGTGACAAGTTAGAAGCGCTTGC...TGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS-3UTR CAA 90 bp CAACAGATGGCACAAGGTGGGGATATTCACATAAGACAGACTTGGATTGATGTTGAGGTGCTTTTACCTTaGCATCGTCCCCTTGCAGGG +
Preference number: 5 (lower is better)
Translates to: QQMAQGGDIHIRQTWIDVEVLLP*HRPLAG
Trigger: CCCTGCAAGGGGACGATGCAAAGGTAAAAGCACCTC...AACATCAATCCAAGTCTGTCTTATGTGAATATCCCCACCTTGTGCCATCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS-3UTR CAA 90 bp CTTCCCACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGCTGACTTCGCCATTTTaGTCATGTACACATGATAAG +
Preference number: 5 (lower is better)
Translates to: LPTVCGCELRGSSIARVELTSPF*SCTHDK
Trigger: CTTATCATGTGTACATGACAAAAATGGCGAAGTCAG...CTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGTGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACACAGCGACTGTGTCAGCCCTaGGTCTTGGACTTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: LVTGSCALHRQIRYIATQRLCQP*VLDFPA
Trigger: GGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCG...CTGTGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp CAGATGGCACAAGGTGGGGATATTCACATAAGACAGACTTGGATTGATGTTATGTTCCACATTGTTGTCTaGGCTGCAGTCCTTGCCGCG +
Preference number: 5 (lower is better)
Translates to: QMAQGGDIHIRQTWIDVMFHIVV*AAVLAA
Trigger: CGCGGCAAGGACTGCAGCCAAGACAACAATGTGGAA...CATAACATCAATCCAAGTCTGTCTTATGTGAATATCCCCACCTTGTGCCATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS-3UTR CAA 90 bp CAACAGATGGCACAAGGTGGGGATATTCACATAAGACAGACTTGGATTGATGTTGCCAGACCTTCCACATaGTTGTCTTGGCTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: QQMAQGGDIHIRQTWIDVARPST*LSWLQS
Trigger: GGACTGCAGCCAAGACAACAATGTGGAAGGTCTGGC...AACATCAATCCAAGTCTGTCTTATGTGAATATCCCCACCTTGTGCCATCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS-3UTR CAA 90 bp GTGACCCTGGAAGGTCGGCTGTGCTGGGACTGCCTCCAACATAGAAAAAGTCATAGGGAAAGACCTAAGTaGCTTCTAAGGAATATGAGA +
Preference number: 5 (lower is better)
Translates to: VTLEGRLCWDCLQHRKSHRERPK*LLRNMR
Trigger: TCTCATATTCCTTAGAAGCAACTTAGGTCTTTCCCT...ATGACTTTTTCTATGTTGGAGGCAGTCCCAGCACAGCCGACCTTCCAGGGTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626249.2
CDS TCA 90 bp TTTGCTGTTTCCTTTGAGCAGGAAGGCTTCACTCCAGCAGTACTTTaGACTTCAGCCATTTGCCGGATATCTTTGCTTTGGCCATCGATG +
Preference number: 5 (lower is better)
Translates to: FAVSFEQEGFTPAVL*TSAICRISLLWPSM
Trigger: CATCGATGGCCAAAGCAAAGATATCCGGCAAATGGCTGAAGTTCAAAGTACTGCTGGAGTGAAGCCTTCCTGCTCAAAGGAAACAGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331040.9
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
ENST00000630543.2
ENST00000636298.1
CDS TCA 90 bp GTGACTGCAGTTATCCTGTGGTTCAAATCCTGGGGTTCCATGATGTaGATTGATCTTACTTATCTGGGCCAAGTGTCTCCTACTGTAGGG +
Preference number: 5 (lower is better)
Translates to: VTAVILWFKSWGSMM*IDLTYLGQVSPTVG
Trigger: CCCTACAGTAGGAGACACTTGGCCCAGATAAGTAAGATCAATTCACATCATGGAACCCCAGGATTTGAACCACAGGATAACTGCAGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637975.1
CDS GCA 90 bp TATCTGCAGTGTCAACAGATACTTAACTCCTCAAATCCCATTATCTaGCAGGTTCCACCAGTGGTACCAGGCCAAAAGGAAGCAGTGAGA +
Preference number: 5 (lower is better)
Translates to: YLQCQQILNSSNPII*QVPPVVPGQKEAVR
Trigger: TCTCACTGCTTCCTTTTGGCCTGGTACCACTGGTGGAACCTGGCAGATAATGGGATTTGAGGAGTTAAGTATCTGTTGACACTGCAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000626899.1
ENST00000628515.2
ENST00000635310.1
ENST00000637511.1
CDS GCA 90 bp TATTCTTCTTTTCCTTTACTTTTACCTTGGTCGCCCATCATCAGGTaGGCCAGACCTTCCACATTGTTGTCTTCTTGGCTGCAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: YSSFPLLLPWSPIIR*ARPSTLLSSWLQSL
Trigger: CAAGGACTGCAGCCAAGAAGACAACAATGTGGAAGGTCTGGCGCACCTGATGATGGGCGACCAAGGTAAAAGTAAAGGAAAAGAAGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000630543.2
CDS GCA 90 bp CCAGTTTTCCTTACAAGCAGATGTCCAGTTGTATCTGTATCTGCCTaGCTCCTCAACCCATCCTCCACAAGATTGAGAAAAGGAAGACAG +
Preference number: 5 (lower is better)
Translates to: PVFLTSRCPVVSVSA*LLNPSSTRLRKGRQ
Trigger: CTGTCTTCCTTTTCTCAATCTTGTGGAGGATGGGTTGAGGAGGCAGGCAGATACAGATACAACTGGACATCTGCTTGTAAGGAAAACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635264.1
CDS CCA 90 bp CTCTTTAAGACTCTTAACTTCAGCCAGTCCTCTTTACTTTTACCTTaGTCGCCCATCATCAGGTGCGCCAGACCTTCCACATTGTTGTCT +
Preference number: 5 (lower is better)
Translates to: LFKTLNFSQSSLLLP*SPIIRCARPSTLLS
Trigger: AGACAACAATGTGGAAGGTCTGGCGCACCTGATGATGGGCGACCAAGGTAAAAGTAAAGAGGACTGGCTGAAGTTAAGAGTCTTAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630431.1
CDS CCA 90 bp TGTTATTTGCGCTCACTTCAGCTTCACACCACGACAAAAATAACTTaGTTAAATGCCTCTGGAGGCTGGAAGTCTGAGATGGGTGTGCCA +
Preference number: 5 (lower is better)
Translates to: CYLRSLQLHTTTKIT*LNASGGWKSEMGVP
Trigger: TGGCACACCCATCTCAGACTTCCAGCCTCCAGAGGCATTTAACCAAGTTATTTTTGTCGTGGTGTGAAGCTGAAGTGAGCGCAAATAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635126.1
CDS-3UTR CAA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTCCACTTATACGTGATTaGTCCACCACCTTTGCTAAA +
Preference number: 5 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVPLIRD*STTFAK
Trigger: TTTAGCAAAGGTGGTGGACAAATCACGTATAAGTGG...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GTTGGAGCTTTTCGCACTGCTGGGTTGTTTCTCCTTTACAACAGCCCCATTGGACCACTTATACGTGATTaGTCCACCACCTTTGCTAAA +
Preference number: 5 (lower is better)
Translates to: VGAFRTAGLFLLYNSPIGPLIRD*STTFAK
Trigger: TTTAGCAAAGGTGGTGGACAAATCACGTATAAGTGG...TCCAATGGGGCTGTTGTAAAGGAGAAACAACCCAGCAGTGCGAAAAGCTCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR CAA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGACCTGCAACGTGGCATaGCCACCACTCCTCGTGAAA +
Preference number: 5 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTETCNVA*PPLLVK
Trigger: TTTCACGAGGAGTGGTGGCAATGCCACGTTGCAGGT...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCACCTGCTCGGGTTGGGTaGGCTAACCCACCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: CRLTNFASITCPHNGSYSPARVG*ANPPEL
Trigger: GAGCTCAGGTGGGTTAGCCAACCCAACCCGAGCAGG...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000636345.1
CDS-3UTR CAA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCATTTACAACAGCCCCATaGGACTGTGCTGAGTTACTG +
Preference number: 5 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSFTTAP*DCAELL
Trigger: CAGTAACTCAGCACAGTCCAATGGGGCTGTTGTAAA...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCATTTCGCACTGCTGGGTaGTTTCTCCTTTACAACAGC +
Preference number: 5 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSFRTAG*FLLYNS
Trigger: GCTGTTGTAAAGGAGAAACAACCCAGCAGTGCGAAA...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTTTTCGCACTGCTGGGTaGTTTCTCCTTTACAACAGC +
Preference number: 5 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSFRTAG*FLLYNS
Trigger: GCTGTTGTAAAGGAGAAACAACCCAGCAGTGCGAAA...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTTGCTGTAGTACTCCTTaGCTTTATGAATGCGTGCGG +
Preference number: 5 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSCCSTP*LYECVR
Trigger: CCGCACGCATTCATAAAGCAAAGGAGTACTACAGCA...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTGTTTTGTGTTGGTTTTaGTGTTGTGCCTTGATGCTG +
Preference number: 5 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVVLCWF*CCALML
Trigger: CAGCATCAAGGCACAACACAAAAACCAACACAAAAC...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GTTGGAGCTTTTCGCACTGCTGGGTTGTTTCTCCTTTACAACAGCCCCATTGGAGTTTTGTGTTGGTTTTaGTGTTGTGCCTTGATGCTG +
Preference number: 5 (lower is better)
Translates to: VGAFRTAGLFLLYNSPIGVLCWF*CCALML
Trigger: CAGCATCAAGGCACAACACAAAAACCAACACAAAAC...TCCAATGGGGCTGTTGTAAAGGAGAAACAACCCAGCAGTGCGAAAAGCTCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000635519.1
CDS-3UTR CAA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAGAAAGCGCTAGCACTTaGGCTAAATCCAGGATCATA +
Preference number: 5 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKESAST*AKSRII
Trigger: TATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTC...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTGAAAGCGCTAGCACTTaGGCTAAATCCAGGATCATA +
Preference number: 5 (lower is better)
Translates to: GLTSQESASTLAKSRIIGESAST*AKSRII
Trigger: TATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTC...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTTAAAGGTTTGCAGGTaGAGTCACTCAAAAGGACAG +
Preference number: 5 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVLKVCR*SHSKGQ
Trigger: CTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAACCAGAAAGGGGCTTTTaGAATGTGTTCCTACACAAG +
Preference number: 5 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKPERGF*NVFLHK
Trigger: CTTGTGTAGGAACACATTCAAAAAGCCCCTTTCTGG...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCAGACAGCCCATAAAGTaGTTACTGACTGGTGACCCT +
Preference number: 5 (lower is better)
Translates to: TSQESASTLAKSRIIGSFRQPIK*LLTGDP
Trigger: AGGGTCACCAGTCAGTAACAACTTTATGGGCTGTCT...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AGGGAAATAAGCATTTCAGAGCATTTCGGGGGCACAAAGAGACCAGGAAATGCAAGACAGCCCATAAAGTaGTTACTGACTGGTGACCCT +
Preference number: 5 (lower is better)
Translates to: REISISEHFGGTKRPGNARQPIK*LLTGDP
Trigger: AGGGTCACCAGTCAGTAACAACTTTATGGGCTGTCT...TGCATTTCCTGGTCTCTTTGTGCCCCCGAAATGCTCTGAAATGCTTATTTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626249.2
CDS-3UTR CAA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTATTTGCCGGATATCTTaGCTTTGGCCATCGATGAAC +
Preference number: 5 (lower is better)
Translates to: GLTSQESASTLAKSRIIGICRIS*LWPSMN
Trigger: GTTCATCGATGGCCAAAGCAAAGATATCCGGCAAAT...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCGTTTTGCTGTTTCCTTaGAGCAGGAAGGCTTCACTC +
Preference number: 5 (lower is better)
Translates to: TSQESASTLAKSRIIGSFVLLFP*SRKASL
Trigger: GAGTGAAGCCTTCCTGCTCAAAGGAAACAGCAAAAC...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAACATAGCTCAAAACCGTaGCCTCTCTCTCACAGGACC +
Preference number: 5 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEHSSKP*PLSHRT
Trigger: GGTCCTGTGAGAGAGAGGCAACGGTTTTGAGCTATG...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAGGTTGCTGGTGTCCCTaGATATCATCACGTTGTGCC +
Preference number: 5 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEGCWCP*ISSRCA
Trigger: GGCACAACGTGATGATATCAAGGGACACCAGCAACC...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCTTTACAGTGTGGAGGTaGCTGGTGTCCCTTGATATC +
Preference number: 5 (lower is better)
Translates to: TSQESASTLAKSRIIGSFFTVWR*LVSLDI
Trigger: GATATCAAGGGACACCAGCAACCTCCACACTGTAAA...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTTTTACAGTGTGGAGGTaGCTGGTGTCCCTTGATATC +
Preference number: 5 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCFTVWR*LVSLDI
Trigger: GATATCAAGGGACACCAGCAACCTCCACACTGTAAA...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp ATATTATACTTCAAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACAGTCCTCTTGGCAGGTaGTGCTGGGCCCTTCACATC +
Preference number: 5 (lower is better)
Translates to: ILYFKGHLCSFKHSSCLHSPLGR*CWALHI
Trigger: GATGTGAAGGGCCCAGCACAACCTGCCAAGAGGACT...GTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTTGAAGTATAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CAA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCAAGGGAGGATGCACTTaGGAGACAACGTTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: TSQESASTLAKSRIIGSFKGGCT*ETTFWK
Trigger: TTTCCAGAACGTTGTCTCCAAAGTGCATCCTCCCTT...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CAA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCAAAGGGAGGATGCACTTaGGAGACAACGTTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSKGGCT*ETTFWK
Trigger: TTTCCAGAACGTTGTCTCCAAAGTGCATCCTCCCTT...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CAA 90 bp CTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTCAGCAGGCGTTCCACTaGGGGAAGCGCGTCCATTGG +
Preference number: 5 (lower is better)
Translates to: LSPKPNKFQSYTKLQYTTQQAFH*GKRVHW
Trigger: CCAATGGACGCGCTTCCCCAAGTGGAACGCCTGCTG...AGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CAA 90 bp TTAGATATTACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGTCTTAACCAGCAGGCGTTCCACTaGGGGAAGCGCGTCCATTGG +
Preference number: 5 (lower is better)
Translates to: LDITHQLVQVEELYPGLNQQAFH*GKRVHW
Trigger: CCAATGGACGCGCTTCCCCAAGTGGAACGCCTGCTG...GTTAAGACCTGGATACAACTCTTCCACCTGAACTAATTGATGAGTAATATCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCCGGGCGCTGCGAGTCTaGAGCTGGAAGCTCATCTCG +
Preference number: 5 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSIRALRV*SWKLIS
Trigger: CGAGATGAGCTTCCAGCTCAAGACTCGCAGCGCCCG...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CTTTCTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACCGGGCGCTGCGAGTCTaGAGCTGGAAGCTCATCTCG +
Preference number: 5 (lower is better)
Translates to: LSLPKTQQIPILYKVTIHRALRV*SWKLIS
Trigger: CGAGATGAGCTTCCAGCTCAAGACTCGCAGCGCCCG...GTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CAA 90 bp TTAGATATTACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGTCTTAACCGGGCGCTGCGAGTCTaGAGCTGGAAGCTCATCTCG +
Preference number: 5 (lower is better)
Translates to: LDITHQLVQVEELYPGLNRALRV*SWKLIS
Trigger: CGAGATGAGCTTCCAGCTCAAGACTCGCAGCGCCCG...GTTAAGACCTGGATACAACTCTTCCACCTGAACTAATTGATGAGTAATATCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAATGAAGAGCGTGGTGTaGCGGAACTGGCGGCGGATG +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKMKSVV*RNWRRM
Trigger: CATCCGCCGCCAGTTCCGCAACACCACGCTCTTCAT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACATGAAGAGCGTGGTGTaGCGGAACTGGCGGCGGATG +
Preference number: 5 (lower is better)
Translates to: DFSNWKLCTSQTNSLYSNMKSVV*RNWRRM
Trigger: CATCCGCCGCCAGTTCCGCAACACCACGCTCTTCAT...GTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTGACCTCCACCCACTaGGCCTCCACCTGGTCGATG +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKLTSTH*ASTWSM
Trigger: CATCGACCAGGTGGAGGCCAAGTGGGTGGAGGTCAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAATTGACCTCCACCCACTaGGCCTCCACCTGGTCGATG +
Preference number: 5 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKLTSTH*ASTWSM
Trigger: CATCGACCAGGTGGAGGCCAAGTGGGTGGAGGTCAA...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCTCCCTGCGCTTGGACTaGACCTCCACCCACTTGGCC +
Preference number: 5 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSISLRLD*TSTHLA
Trigger: GGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGGA...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CTTTCTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACTCCCTGCGCTTGGACTaGACCTCCACCCACTTGGCC +
Preference number: 5 (lower is better)
Translates to: LSLPKTQQIPILYKVTIHSLRLD*TSTHLA
Trigger: GGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGGA...GTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CAA 90 bp AGATCTACTCTTCACAAAGAGAATAAGGCTTATGCACTTTCAGAATGTGTAACTTCCCTGCGCTTGGACTaGACCTCCACCCACTTGGCC +
Preference number: 5 (lower is better)
Translates to: RSTLHKENKAYALSECVTSLRLD*TSTHLA
Trigger: GGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGGA...AGTTACACATTCTGAAAGTGCATAAGCCTTATTCTCTTTGTGAAGAGTAGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCATGTCCCTGCGCTaGGACTTGACCTCCACCCAC +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKVMSLR*DLTSTH
Trigger: GTGGGTGGAGGTCAAGTCCAAGCGCAGGGACATGAC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGCTCACGAATCCACCCCTaGAAGGGCTCCCGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: PKTQQIPILYKVTIHNYSSRIHP*KGSRSL
Trigger: GAGGGAGCGGGAGCCCTTCAAGGGGTGGATTCGTGA...GCTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CAA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGAGCCAGACCTTCCACATaGTTGTCTTCTTGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGARPST*LSSWLQ
Trigger: CTGCAGCCAAGAAGACAACAATGTGGAAGGTCTGGC...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CTGAATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCGCCAGACCTTCCACATaGTTGTCTTCTTGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: LNSYFTLYQSHSTSILSFARPST*LSSWLQ
Trigger: CTGCAGCCAAGAAGACAACAATGTGGAAGGTCTGGC...GAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR CAA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTCTGATACAATCTAGATaGACCGTCAGTTTCACACGT +
Preference number: 5 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVLIQSR*TVSFTR
Trigger: ACGTGTGAAACTGACGGTCAATCTAGATTGTATCAG...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCTCAGAGGCGTCAGGCTaGAGCGTCTATCTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: SFQLQQPELRCRLTNFASSEASG*SVYLQE
Trigger: CTCCTGGAGATAGACGCTCAAGCCTGACGCCTCTGA...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CAA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTTCCTTTACTTTTACCTaGGTCGCCCATCATCAGGTG +
Preference number: 5 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSSFTFT*VAHHQV
Trigger: CACCTGATGATGGGCGACCAAGGTAAAAGTAAAGGA...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGCATATCTGATGGATaGCTGTGGATTCGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKSISDG*LWIRVC
Trigger: ACACACACGAATCCACAGCAATCCATCAGATATGCT...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTCTACTGTATGCACGTTaGGATCTTCCAGCATATCTG +
Preference number: 5 (lower is better)
Translates to: GLTSQESASTLAKSRIIGLLYAR*DLPAYL
Trigger: CAGATATGCTGGAAGATCCAAACGTGCATACAGTAG...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTTTTGTCATCAATACCTaGGCACAACCCTCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTFVINT*AQPSSF
Trigger: GAAGGAAGAGGGTTGTGCCAAGGTATTGATGACAAA...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGTACACAACAATTACTaGGCAACCATAGATAGTGGT +
Preference number: 5 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVVHNNY*ATIDSG
Trigger: ACCACTATCTATGGTTGCCAAGTAATTGTTGTGTAC...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTCGCTGGGGAGAAACATaGAAATCAATCCCAAACAAC +
Preference number: 5 (lower is better)
Translates to: GLTSQESASTLAKSRIIGRWGET*KSIPNN
Trigger: GTTGTTTGGGATTGATTTCAATGTTTCTCCCCAGCG...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCGCTGGGGAGAAACATaGAAATCAATCCCAAACAAC +
Preference number: 5 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTRWGET*KSIPNN
Trigger: GTTGTTTGGGATTGATTTCAATGTTTCTCCCCAGCG...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp CTTCCCACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGCTAACAACAACATCATaGACAAATTTCAAGCCCCAA +
Preference number: 5 (lower is better)
Translates to: LPTVCGCELRGSSIARVELTTTS*TNFKPQ
Trigger: TTGGGGCTTGAAATTTGTCAATGATGTTGTTGTTAG...CTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGTGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TCTATGAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCCAGCCTCCAGACGTTaGAGAAATAAGTTTCTGTTA +
Preference number: 5 (lower is better)
Translates to: SMNQEAKSHWTPTVSALGPASRR*RNKFLL
Trigger: TAACAGAAACTTATTTCTCAAACGTCTGGAGGCTGG...ACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTCATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp CTTCCCACGGTCTGCGGCTGTGAGTTAAGGGGATCCAGTATTGCAAGAGTAGAGTTTAGTAACTGGAAGTaGTGCACTTCACAGACAAAT +
Preference number: 5 (lower is better)
Translates to: LPTVCGCELRGSSIARVEFSNWK*CTSQTN
Trigger: ATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAA...CTCTACTCTTGCAATACTGGATCCCCTTAACTCACAGCCGCAGACCGTGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp GAACCAGGAAGCAAAATCTCACTGGACACCGACTGTGTCAGCCCTTGGTCTTGGTTTAGTAACTGGAAGTaGTGCACTTCACAGACAAAT +
Preference number: 5 (lower is better)
Translates to: EPGSKISLDTDCVSPWSWFSNWK*CTSQTN
Trigger: ATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAA...CCAAGACCAAGGGCTGACACAGTCGGTGTCCAGTGAGATTTTGCTTCCTGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp GTGACCCTGGAAGGTCGGCTGTGCTGGGACTGCCTCCAACATAGAAAAAGTCATTCTGTCAAAACAGTGTaGCCTTTGCAAAAATCAGAT +
Preference number: 5 (lower is better)
Translates to: VTLEGRLCWDCLQHRKSHSVKTV*PLQKSD
Trigger: ATCTGATTTTTGCAAAGGCAACACTGTTTTGACAGA...ATGACTTTTTCTATGTTGGAGGCAGTCCCAGCACAGCCGACCTTCCAGGGTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000626249.2
CDS-3UTR CAA 90 bp TTTTTCCCTGGTGCTGAAGCCTCAGATGCATTGAGAGCCAGTGTACTTTGTCTTGAGAGCCAGTGTACTTaGTCTTTGCTCTTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: FFPGAEASDALRASVLCLESQCT*SLLLFL
Trigger: CAGGAACAAGAGCAAAGACAAAGTACACTGGCTCTC...AAGACAAAGTACACTGGCTCTCAATGCATCTGAGGCTTCAGCACCAGGGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS TCA 90 bp AGACTGCTGACTTTTCATTGTTGTTGGTGGGCTGGTTCAGGTTCTTaGCTTTCTTTTGTTGACTCACCATCCGTAGACATCAGAGGGCAT +
Preference number: 5 (lower is better)
Translates to: RLLTFHCCWWAGSGS*LSFVDSPSVDIRGH
Trigger: ATGCCCTCTGATGTCTACGGATGGTGAGTCAACAAAAGAAAGTCAAGAACCTGAACCAGCCCACCAACAACAATGAAAAGTCAGCAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635126.1
ENST00000636104.1
CDS GCA 90 bp GAAGGAAGTGGGAATCGAACGGCGGAAAGGCAGCTGAGAAGAAGATaGAGACGAAGGAGTAAGGGAGAGAAACAGAAAAAGAAAAAGAAA +
Preference number: 5 (lower is better)
Translates to: EGSGNRTAERQLRRR*RRRSKGEKQKKKKK
Trigger: TTTCTTTTTCTTTTTCTGTTTCTCTCCCTTACTCCTTCGTCTGCATCTTCTTCTCAGCTGCCTTTCCGCCGTTCGATTCCCACTTCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000628364.2
CDS GCA 90 bp TATAAGTCACTCTTGAGGTCTAAGTTCCTGGCTCCGGCGGTGATTTaGGTTGTGATTTTTGTGTCAATCTTTACAGTGTGGAGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: YKSLLRSKFLAPAVI*VVIFVSIFTVWRLL
Trigger: CAGCAACCTCCACACTGTAAAGATTGACACAAAAATCACAACGCAAATCACCGCCGGAGCCAGGAACTTAGACCTCAAGAGTGACTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000331040.9
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000462791.2
ENST00000625320.2
ENST00000625672.2
ENST00000630543.2
ENST00000636298.1
ENST00000637889.1
CDS-3UTR CAA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTATTTGTCCACCACCTTaGCTAAAGATATATGTCGTC +
Preference number: 5 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVICPPP*LKIYVV
Trigger: GACGACATATATCTTTAGCAAAGGTGGTGGACAAAT...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACCCACTATGGCGATGTaGGCATCGTTTTCGGCTGCC +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKPTMAM*ASFSAA
Trigger: GGCAGCCGAAAACGATGCCAACATCGCCATAGTGGG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000637906.1
CDS-3UTR CAA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTTTTACAACAGCCCCATaGGACTGTGCTGAGTTACTG +
Preference number: 5 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTFTTAP*DCAELL
Trigger: CAGTAACTCAGCACAGTCCAATGGGGCTGTTGTAAA...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCTTTCGCACTGCTGGGTaGTTTCTCCTTTACAACAGC +
Preference number: 5 (lower is better)
Translates to: SMKQITPFVINTLAQPSSFRTAG*FLLYNS
Trigger: GCTGTTGTAAAGGAGAAACAACCCAGCAGTGCGAAA...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTGTCCATTTAAGATCTaGGGATCAGACATAATACTC +
Preference number: 5 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHCPFKI*GSDIIL
Trigger: GAGTATTATGTCTGATCCCAAGATCTTAAATGGACA...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GGCTTTCCTCTTCTGGCTGTGCTAGTAGCCAGGGTCGTGGTAGTCTCCATAATTTGTCCATTTAAGATCTaGGGATCAGACATAATACTC +
Preference number: 5 (lower is better)
Translates to: GFPLLAVLVARVVVVSIICPFKI*GSDIIL
Trigger: GAGTATTATGTCTGATCCCAAGATCTTAAATGGACA...AATTATGGAGACTACCACGACCCTGGCTACTAGCACAGCCAGAAGAGGAAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR CAA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTGTGTTGGTTTTTGTGTaGTGCCTTGATGCTGTAGTA +
Preference number: 5 (lower is better)
Translates to: GLTSQESASTLAKSRIIGVLVFV*CLDAVV
Trigger: TACTACAGCATCAAGGCACAACACAAAAACCAACAC...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTGTTTTGTGTTGGTTTTaGTGTTGTGCCTTGATGCTG +
Preference number: 5 (lower is better)
Translates to: GLTSQESASTLAKSRIIGVLCWF*CCALML
Trigger: CAGCATCAAGGCACAACACAAAAACCAACACAAAAC...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAGTTTTGTGTTGGTTTTaGTGTTGTGCCTTGATGCTG +
Preference number: 5 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKVLCWF*CCALML
Trigger: CAGCATCAAGGCACAACACAAAAACCAACACAAAAC...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCGAAAGCGCTAGCACTTaGGCTAAATCCAGGATCATA +
Preference number: 5 (lower is better)
Translates to: TSQESASTLAKSRIIGSFESAST*AKSRII
Trigger: TATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTC...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTGAAAGCGCTAGCACTTaGGCTAAATCCAGGATCATA +
Preference number: 5 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSESAST*AKSRII
Trigger: TATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTC...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCAGAAAGCGCTAGCACTTaGGCTAAATCCAGGATCATA +
Preference number: 5 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSESAST*AKSRII
Trigger: TATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTC...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp AATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTCAAACTCTTAAAGGTTaGCAGGTTGAGTCACTCAAA +
Preference number: 5 (lower is better)
Translates to: NASSNHCSSCTRRQTLKGQTLKG*QVESLK
Trigger: TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTG...ACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACAACCACTGCTCCAGTaGCACCAGGCGGCAAACTCT +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKQPLLQ*HQAANS
Trigger: AGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAACAACCACTGCTCCAGTaGCACCAGGCGGCAAACTCT +
Preference number: 5 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKQPLLQ*HQAANS
Trigger: AGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTG...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCCAGAAAGGGGCTTTTaGAATGTGTTCCTACACAAG +
Preference number: 5 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHPERGF*NVFLHK
Trigger: CTTGTGTAGGAACACATTCAAAAAGCCCCTTTCTGG...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCCAGAAAGGGGCTTTTaGAATGTGTTCCTACACAAG +
Preference number: 5 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSPERGF*NVFLHK
Trigger: CTTGTGTAGGAACACATTCAAAAAGCCCCTTTCTGG...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCCCAGAAAGGGGCTTTTaGAATGTGTTCCTACACAAG +
Preference number: 5 (lower is better)
Translates to: TSQESASTLAKSRIIGSFPERGF*NVFLHK
Trigger: CTTGTGTAGGAACACATTCAAAAAGCCCCTTTCTGG...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp AAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACAAAAGCATTCTGTCCCATCCACTGATATaGTCACCTGACGCAGATTCC +
Preference number: 5 (lower is better)
Translates to: KGHLCSFKHSSCLHKSILSHPLI*SPDADS
Trigger: GGAATCTGCGTCAGGTGACAATATCAGTGGATGGGA...CAGAATGCTTTTGTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CAA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTTATATACAACCTCTTaGAGACAGCCCATAAAGTTG +
Preference number: 5 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHLYTTS*RQPIKL
Trigger: CAACTTTATGGGCTGTCTCAAAGAGGTTGTATATAA...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCTTATATACAACCTCTTaGAGACAGCCCATAAAGTTG +
Preference number: 5 (lower is better)
Translates to: QVPTTAPVAPGGKLLKVCLYTTS*RQPIKL
Trigger: CAACTTTATGGGCTGTCTCAAAGAGGTTGTATATAA...GCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTTTAGGATCTCCTTGCTaGGCAAGTCGAGATAATTCC +
Preference number: 5 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCLGSPC*ASRDNS
Trigger: GGAATTATCTCGACTTGCCAAGCAAGGAGATCCTAA...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCCCGGATATCTTTGCTTaGGCCATCGATGAACAAATC +
Preference number: 5 (lower is better)
Translates to: TSQESASTLAKSRIIGSFPDIFA*AIDEQI
Trigger: GATTTGTTCATCGATGGCCAAAGCAAAGATATCCGG...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCACCGGATATCTTTGCTTaGGCCATCGATGAACAAATC +
Preference number: 5 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSPDIFA*AIDEQI
Trigger: GATTTGTTCATCGATGGCCAAAGCAAAGATATCCGG...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TTTGTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTTTGAACTTCAGCCATTaGCCGGATATCTTTGCTTTG +
Preference number: 5 (lower is better)
Translates to: FVSNASSNHCSSCTRRQTLNFSH*PDIFAL
Trigger: CAAAGCAAAGATATCCGGCAAATGGCTGAAGTTCAA...AGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTTTGTTTTTGCAAGGGTaGCTAAGGCACGGTTTTGCT +
Preference number: 5 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSLFLQG*LRHGFA
Trigger: AGCAAAACCGTGCCTTAGCAACCCTTGCAAAAACAA...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTCACATGCCATTGTTTTaGCAAGGGTTGCTAAGGCAC +
Preference number: 5 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTHMPLF*QGLLRH
Trigger: GTGCCTTAGCAACCCTTGCAAAAACAATGGCATGTG...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AATGACTGCAGGTCAAGGATTCCAATAAGGAAACAGAAGGTTGCAGATGTTAGACATAGCTCAAAACCGTaGCCTCTCTCTCACAGGACC +
Preference number: 5 (lower is better)
Translates to: NDCRSRIPIRKQKVADVRHSSKP*PLSHRT
Trigger: GGTCCTGTGAGAGAGAGGCAACGGTTTTGAGCTATG...TCTAACATCTGCAACCTTCTGTTTCCTTATTGGAATCCTTGACCTGCAGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CAA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGATCACCTGCCATTaGACCTGTCATGGCCTGTTG +
Preference number: 5 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEMITCH*TCHGLL
Trigger: CAACAGGCCATGACAGGTCAAATGGCAGGTGATCAT...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTTATTTGAGCTTCCTTaGATGAGGTTAGCACCATTT +
Preference number: 5 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHLFELP*MRLAPF
Trigger: AAATGGTGCTAACCTCATCAAAGGAAGCTCAAATAA...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTTTATTTGAGCTTCCTTaGATGAGGTTAGCACCATTT +
Preference number: 5 (lower is better)
Translates to: SNHCSSCTRRQTLKGLQVLFELP*MRLAPF
Trigger: AAATGGTGCTAACCTCATCAAAGGAAGCTCAAATAA...AACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AATGACTGCAGGTCAAGGATTCCAATAAGGAAACAGAAGGTTGCAGATGTTAGAGGTTGCTGGTGTCCCTaGATATCATCACGTTGTGCC +
Preference number: 5 (lower is better)
Translates to: NDCRSRIPIRKQKVADVRGCWCP*ISSRCA
Trigger: GGCACAACGTGATGATATCAAGGGACACCAGCAACC...TCTAACATCTGCAACCTTCTGTTTCCTTATTGGAATCCTTGACCTGCAGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAGTCCTCTTGGCAGGTaGTGCTGGGCCCTTCACATC +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKSPLGR*CWALHI
Trigger: GATGTGAAGGGCCCAGCACAACCTGCCAAGAGGACT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCGAAGCCATCCCATTGTaGCAAGCACACACCTTGATT +
Preference number: 5 (lower is better)
Translates to: SMKQITPFVINTLAQPSSEAIPL*QAHTLI
Trigger: AATCAAGGTGTGTGCTTGCAACAATGGGATGGCTTC...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCGTCCCAGGGTCATaGCAGAGTGGTCCACTGAAG +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKVVPGS*QSGPLK
Trigger: CTTCAGTGGACCACTCTGCAATGACCCTGGGACGAC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAAGTCGTCCCAGGGTCATaGCAGAGTGGTCCACTGAAG +
Preference number: 5 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKVVPGS*QSGPLK
Trigger: CTTCAGTGGACCACTCTGCAATGACCCTGGGACGAC...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GAAGAGGAACCTAATTCCTTCATAATGATCTATGAGCTGTTTCCCTCCCCCAATACTCAAACCCAGCAGTaGCGAAATAGCCAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: EEEPNSFIMIYELFPSPNTQTQQ*RNSQKL
Trigger: CAGCTTCTGGCTATTTCGCAACTGCTGGGTTTGAGT...ATTGGGGGAGGGAAACAGCTCATAGATCATTATGAAGGAATTAGGTTCCTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CAA 90 bp AGATCTACTCTTCACAAAGAGAATAAGGCTTATGCACTTTCAGAATGTGTAACTATGAAGAGCGTGGTGTaGCGGAACTGGCGGCGGATG +
Preference number: 5 (lower is better)
Translates to: RSTLHKENKAYALSECVTMKSVV*RNWRRM
Trigger: CATCCGCCGCCAGTTCCGCAACACCACGCTCTTCAT...AGTTACACATTCTGAAAGTGCATAAGCCTTATTCTCTTTGTGAAGAGTAGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp CCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGATGAAGAGCGTGGTGTaGCGGAACTGGCGGCGGATG +
Preference number: 5 (lower is better)
Translates to: PQNPTNSNLIQSYNTQLQMKSVV*RNWRRM
Trigger: CATCCGCCGCCAGTTCCGCAACACCACGCTCTTCAT...CTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CAA 90 bp CTTTCTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACTTGACCTCCACCCACTaGGCCTCCACCTGGTCGATG +
Preference number: 5 (lower is better)
Translates to: LSLPKTQQIPILYKVTIHLTSTH*ASTWSM
Trigger: CATCGACCAGGTGGAGGCCAAGTGGGTGGAGGTCAA...GTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CAA 90 bp AGATCTACTCTTCACAAAGAGAATAAGGCTTATGCACTTTCAGAATGTGTAACTGTCATGTCCCTGCGCTaGGACTTGACCTCCACCCAC +
Preference number: 5 (lower is better)
Translates to: RSTLHKENKAYALSECVTVMSLR*DLTSTH
Trigger: GTGGGTGGAGGTCAAGTCCAAGCGCAGGGACATGAC...AGTTACACATTCTGAAAGTGCATAAGCCTTATTCTCTTTGTGAAGAGTAGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp CTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTGTCATGTCCCTGCGCTaGGACTTGACCTCCACCCAC +
Preference number: 5 (lower is better)
Translates to: LSPKPNKFQSYTKLQYTTVMSLR*DLTSTH
Trigger: GTGGGTGGAGGTCAAGTCCAAGCGCAGGGACATGAC...AGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CAA 90 bp ATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACAGTCATGTCCCTGCGCTaGGACTTGACCTCCACCCAC +
Preference number: 5 (lower is better)
Translates to: ILVTGSCALHRQIRYIATVMSLR*DLTSTH
Trigger: GTGGGTGGAGGTCAAGTCCAAGCGCAGGGACATGAC...TGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAGGACCTGCGAGGAGTaGACCCTCACGTCACGAATC +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKRTCEE*TLTSRI
Trigger: GATTCGTGACGTGAGGGTCAACTCCTCGCAGGTCCT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACAGGACCTGCGAGGAGTaGACCCTCACGTCACGAATC +
Preference number: 5 (lower is better)
Translates to: DFSNWKLCTSQTNSLYSNRTCEE*TLTSRI
Trigger: GATTCGTGACGTGAGGGTCAACTCCTCGCAGGTCCT...GTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAAGACCTTCCACATTGTaGTCTTCTTGGCTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLARPSTL*SSWLQS
Trigger: GGACTGCAGCCAAGAAGACAACAATGTGGAAGGTCT...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AAATGTCCATTTGACTCTTTAAAATGGACAGTTGAAACCACCGCCCCCAAACAAGCCAGACCTTCCACATaGTTGTCTTCTTGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: KCPFDSLKWTVETTAPKQARPST*LSSWLQ
Trigger: CTGCAGCCAAGAAGACAACAATGTGGAAGGTCTGGC...TTGTTTGGGGGCGGTGGTTTCAACTGTCCATTTTAAAGAGTCAAATGGACATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp ATATGCACCAAACACAGGCATTTCAACAGTAAGGGTCTGTCAACATTCACAAACGCCAGACCTTCCACATaGTTGTCTTCTTGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: ICTKHRHFNSKGLSTFTNARPST*LSSWLQ
Trigger: CTGCAGCCAAGAAGACAACAATGTGGAAGGTCTGGC...GTTTGTGAATGTTGACAGACCCTTACTGTTGAAATGCCTGTGTTTGGTGCATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTCTGATACAATCTAGATaGACCGTCAGTTTCACACGT +
Preference number: 5 (lower is better)
Translates to: GLTSQESASTLAKSRIIGLIQSR*TVSFTR
Trigger: ACGTGTGAAACTGACGGTCAATCTAGATTGTATCAG...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACCCAGTTTATGGTTCAGAGGCGTCAGGCTaGAGCGTCTATCTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: SRRLRNKFLLLTSYPVYGSEASG*SVYLQE
Trigger: CTCCTGGAGATAGACGCTCAAGCCTGACGCCTCTGA...ACCATAAACTGGGTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405581.3
CDS-3UTR CAA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAACCGAATTTTATTTCTaGGCTGCAGTCCTTGCCGCG +
Preference number: 5 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLATEFYF*AAVLAA
Trigger: CGCGGCAAGGACTGCAGCCAAGAAATAAAATTCGGT...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404971.5
CDS-3UTR CAA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCTATTTTCCTTGGTCATaGTCATGTAACAGCACCGGC +
Preference number: 5 (lower is better)
Translates to: TSQESASTLAKSRIIGSFYFPWS*SCNSTG
Trigger: GCCGGTGCTGTTACATGACAATGACCAAGGAAAATA...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404971.5
CDS-3UTR CAA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCAAGCATATCTGATGGATaGCTGTGGATTCGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSSISDG*LWIRVC
Trigger: ACACACACGAATCCACAGCAATCCATCAGATATGCT...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATTTTGTCATCAATACCTaGGCACAACCCTCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHFVINT*AQPSSF
Trigger: GAAGGAAGAGGGTTGTGCCAAGGTATTGATGACAAA...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTTTTGTCATCAATACCTaGGCACAACCCTCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSFVINT*AQPSSF
Trigger: GAAGGAAGAGGGTTGTGCCAAGGTATTGATGACAAA...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATAGCAAATCACCCCATTaGTCATCAATACCTTGGCAC +
Preference number: 5 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHSKSPH*SSIPWH
Trigger: GTGCCAAGGTATTGATGACAAATGGGGTGATTTGCT...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCAAGCAAATCACCCCATTaGTCATCAATACCTTGGCAC +
Preference number: 5 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSSKSPH*SSIPWH
Trigger: GTGCCAAGGTATTGATGACAAATGGGGTGATTTGCT...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCCTTTGCATCGTCCCCTaGCAGGGGGAGCCTGATCCT +
Preference number: 5 (lower is better)
Translates to: CNNIISVHENFPMIASMPLCIVP*QGEPDP
Trigger: AGGATCAGGCTCCCCCTGCAAGGGGACGATGCAAAG...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000406316.6
CDS-3UTR CAA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCGCTGGGGAGAAACATaGAAATCAATCCCAAACAAC +
Preference number: 5 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSRWGET*KSIPNN
Trigger: GTTGTTTGGGATTGATTTCAATGTTTCTCCCCAGCG...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp ACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACCCAATAATGGATAAATaGGCCTTGCAACAGAAAAAC +
Preference number: 5 (lower is better)
Translates to: TAPVAPGGKLLKVCRLSHPIMDK*ALQQKN
Trigger: GTTTTTCTGTTGCAAGGCCAATTTATCCATTATTGG...GTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000636345.1
CDS-3UTR CAA 90 bp TTCTATATGTTTGCCACAGCTGCATACCACTTACTTCCTTTTAATGACAACATTCGACTGTGTCAGCCCTaGGTCTTGGACTTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: FYMFATAAYHLLPFNDNIRLCQP*VLDFPA
Trigger: GGCTGGGAAGTCCAAGACCAAGGGCTGACACAGTCG...AATGTTGTCATTAAAAGGAAGTAAGTGGTATGCAGCTGTGGCAAACATATAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS-3UTR CAA 90 bp TTAATTTGCAGCCATATAATTTGCAAGCATTTGCCCATCCTTTGCAGTGATGGTAACAGAGCCCATACCTaGGTCGCCCATCATCAGGTG +
Preference number: 5 (lower is better)
Translates to: LICSHIICKHLPILCSDGNRAHT*VAHHQV
Trigger: CACCTGATGATGGGCGACCAAGGTATGGGCTCTGTT...ACCATCACTGCAAAGGATGGGCAAATGCTTGCAAATTATATGGCTGCAAATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496792.3
CDS TCA 90 bp TGCAGTTATCCTGTGGTTCAAATCCTGGGGTTCCATGATGTGAATTaGTCTTACTTATCTGGGCCAAGTGTCTCCTACTGTAGGGTTCTT +
Preference number: 5 (lower is better)
Translates to: CSYPVVQILGFHDVN*SYLSGPSVSYCRVL
Trigger: AAGAACCCTACAGTAGGAGACACTTGGCCCAGATAAGTAAGATCAATTCACATCATGGAACCCCAGGATTTGAACCACAGGATAACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637975.1
CDS TCA 90 bp GTGGTTATGAGACTTGTCCTTCTCACTGCATACTCTTTTTCTTTGTaGACCTGTGACTGCAGTTATCCTGTGGTTCAAATCCTGGGGTTC +
Preference number: 5 (lower is better)
Translates to: VVMRLVLLTAYSFSL*TCDCSYPVVQILGF
Trigger: GAACCCCAGGATTTGAACCACAGGATAACTGCAGTCACAGGTTCACAAAGAAAAAGAGTATGCAGTGAGAAGGACAAGTCTCATAACCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637975.1
CDS GCA 90 bp TGTACTTTGTCTTTGCTCTTGTTCCTGCCTTGTCTAGCATCTGGATaGAGAAGATCTGGATGCAGTGAAAGACTCAAAGGCTATATGCAG +
Preference number: 5 (lower is better)
Translates to: CTLSLLLFLPCLASG*RRSGCSERLKGYMQ
Trigger: CTGCATATAGCCTTTGAGTCTTTCACTGCATCCAGATCTTCTGCATCCAGATGCTAGACAAGGCAGGAACAAGAGCAAAGACAAAGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAACCTGCAACGTGGCATaGCCACCACTCCTCGTGAAA +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKTCNVA*PPLLVK
Trigger: TTTCACGAGGAGTGGTGGCAATGCCACGTTGCAGGT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000637906.1
CDS-3UTR CAA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCCCCACTATGGCGATGTaGGCATCGTTTTCGGCTGCC +
Preference number: 5 (lower is better)
Translates to: CNNIISVHENFPMIASMPPTMAM*ASFSAA
Trigger: GGCAGCCGAAAACGATGCCAACATCGCCATAGTGGG...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GTTTCAAATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTTGTCCATTTAAGATCTaGGGATCAGACATAATACTC +
Preference number: 5 (lower is better)
Translates to: VSNASSNHCSSCTRRQTLCPFKI*GSDIIL
Trigger: GAGTATTATGTCTGATCCCAAGATCTTAAATGGACA...AAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCATTTGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCATGCTGTAGTACTCCTTaGCTTTATGAATGCGTGCGG +
Preference number: 5 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLACCSTP*LYECVR
Trigger: CCGCACGCATTCATAAAGCAAAGGAGTACTACAGCA...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTATGCTGTAGTACTCCTTaGCTTTATGAATGCGTGCGG +
Preference number: 5 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLCCSTP*LYECVR
Trigger: CCGCACGCATTCATAAAGCAAAGGAGTACTACAGCA...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
CDS-3UTR CAA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCGTGTTGGTTTTTGTGTaGTGCCTTGATGCTGTAGTA +
Preference number: 5 (lower is better)
Translates to: TSQESASTLAKSRIIGSFVLVFV*CLDAVV
Trigger: TACTACAGCATCAAGGCACAACACAAAAACCAACAC...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTGTGTTGGTTTTTGTGTaGTGCCTTGATGCTGTAGTA +
Preference number: 5 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCVLVFV*CLDAVV
Trigger: TACTACAGCATCAAGGCACAACACAAAAACCAACAC...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTGTGTTGGTTTTTGTGTaGTGCCTTGATGCTGTAGTA +
Preference number: 5 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSVLVFV*CLDAVV
Trigger: TACTACAGCATCAAGGCACAACACAAAAACCAACAC...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCGTTTTGTGTTGGTTTTaGTGTTGTGCCTTGATGCTG +
Preference number: 5 (lower is better)
Translates to: TSQESASTLAKSRIIGSFVLCWF*CCALML
Trigger: CAGCATCAAGGCACAACACAAAAACCAACACAAAAC...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTTTAAAGGTTTGCAGGTaGAGTCACTCAAAAGGACAG +
Preference number: 5 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSLKVCR*SHSKGQ
Trigger: CTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGTCCCATCCACTGATATaGTCACCTGACGCAGATTCC +
Preference number: 5 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTESHPLI*SPDADS
Trigger: GGAATCTGCGTCAGGTGACAATATCAGTGGATGGGA...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625672.2
CDS-3UTR CAA 90 bp AAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACAAAAGCATTCTGAGACAGCCCATAAAGTaGTTACTGACTGGTGACCCT +
Preference number: 5 (lower is better)
Translates to: KGHLCSFKHSSCLHKSILRQPIK*LLTGDP
Trigger: AGGGTCACCAGTCAGTAACAACTTTATGGGCTGTCT...CAGAATGCTTTTGTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CAA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAAGACAGCCCATAAAGTaGTTACTGACTGGTGACCCT +
Preference number: 5 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLRQPIK*LLTGDP
Trigger: AGGGTCACCAGTCAGTAACAACTTTATGGGCTGTCT...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AATGACTGCAGGTCAAGGATTCCAATAAGGAAACAGAAGGTTGCAGATGTTAGAGGAGTACGCAACGTGTaGACAGAAATGGTACCTGAC +
Preference number: 5 (lower is better)
Translates to: NDCRSRIPIRKQKVADVRGVRNV*TEMVPD
Trigger: GTCAGGTACCATTTCTGTCAACACGTTGCGTACTCC...TCTAACATCTGCAACCTTCTGTTTCCTTATTGGAATCCTTGACCTGCAGTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CAA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGGGAGTACGCAACGTGTaGACAGAAATGGTACCTGAC +
Preference number: 5 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTEGVRNV*TEMVPD
Trigger: GTCAGGTACCATTTCTGTCAACACGTTGCGTACTCC...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTTTGAACTTCAGCCATTaGCCGGATATCTTTGCTTTG +
Preference number: 5 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCLNFSH*PDIFAL
Trigger: CAAAGCAAAGATATCCGGCAAATGGCTGAAGTTCAA...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACAAAAGCATTCTGCACATGCCATTGTTTTaGCAAGGGTTGCTAAGGCAC +
Preference number: 5 (lower is better)
Translates to: KGHLCSFKHSSCLHKSILHMPLF*QGLLRH
Trigger: GTGCCTTAGCAACCCTTGCAAAAACAATGGCATGTG...CAGAATGCTTTTGTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CAA 90 bp ATGCAAGTTCCAACCACTGCTCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTTATTTGAGCTTCCTTaGATGAGGTTAGCACCATTT +
Preference number: 5 (lower is better)
Translates to: MQVPTTAPVAPGGKLLKVLFELP*MRLAPF
Trigger: AAATGGTGCTAACCTCATCAAAGGAAGCTCAAATAA...AACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGAGCAGTGGTTGGAACTTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp ATATTATACTTCAAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACGGCTCCGGCGGTGATTaGCGTTGTGATTTTTGTGTC +
Preference number: 5 (lower is better)
Translates to: ILYFKGHLCSFKHSSCLHGSGGD*RCDFCV
Trigger: GACACAAAAATCACAACGCAAATCACCGCCGGAGCC...GTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTTGAAGTATAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CAA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAGAAGCCATCCCATTGTaGCAAGCACACACCTTGATT +
Preference number: 5 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEEAIPL*QAHTLI
Trigger: AATCAAGGTGTGTGCTTGCAACAATGGGATGGCTTC...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCAGTCGTCCCAGGGTCATaGCAGAGTGGTCCACTGAAG +
Preference number: 5 (lower is better)
Translates to: SYYVTELDFESNIILQRPVVPGS*QSGPLK
Trigger: CTTCAGTGGACCACTCTGCAATGACCCTGGGACGAC...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CAA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGACTCAAACCCAGCAGTaGCGAAATAGCCAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTETQTQQ*RNSQKL
Trigger: CAGCTTCTGGCTATTTCGCAACTGCTGGGTTTGAGT...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CAA 90 bp ATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCACTCAAACCCAGCAGTaGCGAAATAGCCAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: IPTSLCTSLTALPFCHSFTQTQQ*RNSQKL
Trigger: CAGCTTCTGGCTATTTCGCAACTGCTGGGTTTGAGT...GAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR CAA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATGCGTGGTCTCACAAGTaGGATTTTACTTCTCTTTTC +
Preference number: 5 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHAWSHK*DFTSLF
Trigger: GAAAAGAGAAGTAAAATCCAACTTGTGAGACCACGC...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CAA 90 bp GTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACACAGGACCCAAAGCCTAATTCCTaGTGCGTGGTCTCACAAGTT +
Preference number: 5 (lower is better)
Translates to: VTGSCALHRQIRYIATQDPKPNS*CVVSQV
Trigger: AACTTGTGAGACCACGCACAAGGAATTAGGCTTTGG...GTCCTGTGTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR CAA 90 bp ATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCAGTGAGCCAGTATCCTaGGATGCTTGTGAATGCCTC +
Preference number: 5 (lower is better)
Translates to: IPTSLCTSLTALPFCHSFSEPVS*DACECL
Trigger: GAGGCATTCACAAGCATCCAAGGATACTGGCTCACT...GAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR CAA 90 bp TTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATAGTGAGCCAGTATCCTaGGATGCTTGTGAATGCCTC +
Preference number: 5 (lower is better)
Translates to: LYQSHSTSILSFILTCPNSEPVS*DACECL
Trigger: GAGGCATTCACAAGCATCCAAGGATACTGGCTCACT...ATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR CAA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCAAGGGAGGATGCACTTaGGAGACAACGTTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: LQQPELRCRLTNFASITCKGGCT*ETTFWK
Trigger: TTTCCAGAACGTTGTCTCCAAAGTGCATCCTCCCTT...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CAA 90 bp CTTTCTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAGGACCTGCGAGGAGTaGACCCTCACGTCACGAATC +
Preference number: 5 (lower is better)
Translates to: LSLPKTQQIPILYKVTIHRTCEE*TLTSRI
Trigger: GATTCGTGACGTGAGGGTCAACTCCTCGCAGGTCCT...GTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACACATTGTTGTCTTCTaGGCTGCAGTCCTTGCCGCG +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKHIVVF*AAVLAA
Trigger: CGCGGCAAGGACTGCAGCCAAGAAGACAACAATGTG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp ATATGCACCAAACACAGGCATTTCAACAGTAAGGGTCTGTCAACATTCACAAACAGACCTTCCACATTGTaGTCTTCTTGGCTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: ICTKHRHFNSKGLSTFTNRPSTL*SSWLQS
Trigger: GGACTGCAGCCAAGAAGACAACAATGTGGAAGGTCT...GTTTGTGAATGTTGACAGACCCTTACTGTTGAAATGCCTGTGTTTGGTGCATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TCTGAATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTAGACCTTCCACATTGTaGTCTTCTTGGCTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: SEFLLHFVPVSQHFHSVIRPSTL*SSWLQS
Trigger: GGACTGCAGCCAAGAAGACAACAATGTGGAAGGTCT...AATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR CAA 90 bp CCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGCTCAGAGGCGTCAGGCTaGAGCGTCTATCTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: PKTQQIPILYKVTIHNYSSEASG*SVYLQE
Trigger: CTCCTGGAGATAGACGCTCAAGCCTGACGCCTCTGA...GCTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CAA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATAGACCTTCCACATTGTaGTCTTTTTCTGTTAGAGGC +
Preference number: 5 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHRPSTL*SFSVRG
Trigger: GCCTCTAACAGAAAAAGACAACAATGTGGAAGGTCT...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404971.5
CDS-3UTR CAA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCTCCTTTACTTTTACCTaGGTCGCCCATCATCAGGTG +
Preference number: 5 (lower is better)
Translates to: LQQPELRCRLTNFASITCSFTFT*VAHHQV
Trigger: CACCTGATGATGGGCGACCAAGGTAAAAGTAAAGGA...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCCTACTGTATGCACGTTaGGATCTTCCAGCATATCTG +
Preference number: 5 (lower is better)
Translates to: SMKQITPFVINTLAQPSSLLYAR*DLPAYL
Trigger: CAGATATGCTGGAAGATCCAAACGTGCATACAGTAG...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAAGAGGTGCTTTTACCTTaGCATCGTCCCCTTGCAGGG +
Preference number: 5 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKEVLLP*HRPLAG
Trigger: CCCTGCAAGGGGACGATGCAAAGGTAAAAGCACCTC...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000406316.6
CDS-3UTR CAA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAGTACACAACAATTACTaGGCAACCATAGATAGTGGT +
Preference number: 5 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKVHNNY*ATIDSG
Trigger: ACCACTATCTATGGTTGCCAAGTAATTGTTGTGTAC...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTCGCTGGGGAGAAACATaGAAATCAATCCCAAACAAC +
Preference number: 5 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTRWGET*KSIPNN
Trigger: GTTGTTTGGGATTGATTTCAATGTTTCTCCCCAGCG...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCATCCACATGGTCTGCTTaGTCCCTGAGCTCGGCTCAC +
Preference number: 5 (lower is better)
Translates to: CRLTNFASITCPHNGSYSSTWSA*SLSSAH
Trigger: GTGAGCCGAGCTCAGGGACAAAGCAGACCATGTGGA...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635519.1
CDS TCA 90 bp GTGGTTATGAGACTTGTCCTTCTCACTGCATACTCTTTTTCTTTGTaGTTATCTGGGCCAAGTGTCTCCTACTGTAGGGTTCTTCAGATG +
Preference number: 5 (lower is better)
Translates to: VVMRLVLLTAYSFSL*LSGPSVSYCRVLQM
Trigger: CATCTGAAGAACCCTACAGTAGGAGACACTTGGCCCAGATAATCACAAAGAAAAAGAGTATGCAGTGAGAAGGACAAGTCTCATAACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000416262.6
ENST00000447773.2
ENST00000636104.1
ENST00000637368.1
CDS CCA 90 bp TGGCTTTCTTTGGGATCAATCAGCTTCTCTCTTCTTCCACCTCATTaGTCAGTGCAAATCCAACTGCTCTTTAAGACTCTTAACTTCAGC +
Preference number: 5 (lower is better)
Translates to: WLSLGSISFSLLPPH*SVQIQLLFKTLNFS
Trigger: GCTGAAGTTAAGAGTCTTAAAGAGCAGTTGGATTTGCACTGACCAATGAGGTGGAAGAAGAGAGAAGCTGATTGATCCCAAAGAAAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630431.1
CDS-3UTR CAA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCCCACTTATACGTGATTaGTCCACCACCTTTGCTAAA +
Preference number: 5 (lower is better)
Translates to: SMKQITPFVINTLAQPSSPLIRD*STTFAK
Trigger: TTTAGCAAAGGTGGTGGACAAATCACGTATAAGTGG...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGTTTACAACAGCCCCATaGGACTGTGCTGAGTTACTG +
Preference number: 5 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMFTTAP*DCAELL
Trigger: CAGTAACTCAGCACAGTCCAATGGGGCTGTTGTAAA...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
CDS-3UTR CAA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGTTTCGCACTGCTGGGTaGTTTCTCCTTTACAACAGC +
Preference number: 5 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMFRTAG*FLLYNS
Trigger: GCTGTTGTAAAGGAGAAACAACCCAGCAGTGCGAAA...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
CDS-3UTR CAA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTGTGTTATGTTTTGTGTaGGTTTTTGTGTTGTGCCTT +
Preference number: 5 (lower is better)
Translates to: GLTSQESASTLAKSRIIGVLCFV*VFVLCL
Trigger: AAGGCACAACACAAAAACCAACACAAAACATAACAC...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TCCAGTTGCACCAGGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAGTGTTATGTTTTGTGTaGGTTTTTGTGTTGTGCCTT +
Preference number: 5 (lower is better)
Translates to: SSCTRRQTLKGLQVESLKVLCFV*VFVLCL
Trigger: AAGGCACAACACAAAAACCAACACAAAACATAACAC...TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCCTGGTGCAACTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAGAAAGCGCTAGCACTTaGGCTAAATCCAGGATCATA +
Preference number: 5 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEESAST*AKSRII
Trigger: TATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTC...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAAGCGCTAGCACTTaGGCTAAATCCAGGATCATA +
Preference number: 5 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLESAST*AKSRII
Trigger: TATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTC...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCTTAAAGGTTTGCAGGTaGAGTCACTCAAAAGGACAG +
Preference number: 5 (lower is better)
Translates to: SMKQITPFVINTLAQPSSLKVCR*SHSKGQ
Trigger: CTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TGCACGTTTGGATCTTCCAGCATATCTGATGGATTGCTGTGGATTCGTGTGTGTCAAACTCTTAAAGGTTaGCAGGTTGAGTCACTCAAA +
Preference number: 5 (lower is better)
Translates to: CTFGSSSISDGLLWIRVCQTLKG*QVESLK
Trigger: TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTG...ACACACACGAATCCACAGCAATCCATCAGATATGCTGGAAGATCCAAACGTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCACAAACTCTTAAAGGTTaGCAGGTTGAGTCACTCAAA +
Preference number: 5 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSQTLKG*QVESLK
Trigger: TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTG...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp AGGGAAATAAGCATTTCAGAGCATTTCGGGGGCACAAAGAGACCAGGAAATGCATCTGTACTAGGACATTaGCTTCCAGAAGTCATGAAA +
Preference number: 5 (lower is better)
Translates to: REISISEHFGGTKRPGNASVLGH*LPEVMK
Trigger: TTTCATGACTTCTGGAAGCAAATGTCCTAGTACAGA...TGCATTTCCTGGTCTCTTTGTGCCCCCGAAATGCTCTGAAATGCTTATTTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626249.2
CDS-3UTR CAA 90 bp GGACTGACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTTTATATACAACCTCTTaGAGACAGCCCATAAAGTTG +
Preference number: 5 (lower is better)
Translates to: GLTSQESASTLAKSRIIGLYTTS*RQPIKL
Trigger: CAACTTTATGGGCTGTCTCAAAGAGGTTGTATATAA...ACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGTCAGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCTTAGGATCTCCTTGCTaGGCAAGTCGAGATAATTCC +
Preference number: 5 (lower is better)
Translates to: LQQPELRCRLTNFASITCLGSPC*ASRDNS
Trigger: GGAATTATCTCGACTTGCCAAGCAAGGAGATCCTAA...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCGGAGTACGCAACGTGTaGACAGAAATGGTACCTGAC +
Preference number: 5 (lower is better)
Translates to: SFQLQQPELRCRLTNFASGVRNV*TEMVPD
Trigger: GTCAGGTACCATTTCTGTCAACACGTTGCGTACTCC...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAACCGGATATCTTTGCTTaGGCCATCGATGAACAAATC +
Preference number: 5 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEPDIFA*AIDEQI
Trigger: GATTTGTTCATCGATGGCCAAAGCAAAGATATCCGG...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTTGCCGGATATCTTaGCTTTGGCCATCGATGAAC +
Preference number: 5 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAICRIS*LWPSMN
Trigger: GTTCATCGATGGCCAAAGCAAAGATATCCGGCAAAT...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAATTTGCCGGATATCTTaGCTTTGGCCATCGATGAAC +
Preference number: 5 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLICRIS*LWPSMN
Trigger: GTTCATCGATGGCCAAAGCAAAGATATCCGGCAAAT...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCAATGAAGCAAATCACCCCATTTGTCATCAATACCTTGGCACAACCCTCTTCCTTGAACTTCAGCCATTaGCCGGATATCTTTGCTTTG +
Preference number: 5 (lower is better)
Translates to: SMKQITPFVINTLAQPSSLNFSH*PDIFAL
Trigger: CAAAGCAAAGATATCCGGCAAATGGCTGAAGTTCAA...GGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTCATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AATGACTGCAGGTCAAGGATTCCAATAAGGAAACAGAAGGTTGCAGATGTTAGAGTTTTGCTGTTTCCTTaGAGCAGGAAGGCTTCACTC +
Preference number: 5 (lower is better)
Translates to: NDCRSRIPIRKQKVADVRVLLFP*SRKASL
Trigger: GAGTGAAGCCTTCCTGCTCAAAGGAAACAGCAAAAC...TCTAACATCTGCAACCTTCTGTTTCCTTATTGGAATCCTTGACCTGCAGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CAA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCATTGTTTTTGCAAGGGTaGCTAAGGCACGGTTTTGCT +
Preference number: 5 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLALFLQG*LRHGFA
Trigger: AGCAAAACCGTGCCTTAGCAACCCTTGCAAAAACAA...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACATAGCTCAAAACCGTaGCCTCTCTCTCACAGGACC +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKHSSKP*PLSHRT
Trigger: GGTCCTGTGAGAGAGAGGCAACGGTTTTGAGCTATG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATGATCACCTGCCATTaGACCTGTCATGGCCTGTTG +
Preference number: 5 (lower is better)
Translates to: SFQLQQPELRCRLTNFASMITCH*TCHGLL
Trigger: CAACAGGCCATGACAGGTCAAATGGCAGGTGATCAT...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGGTTGCTGGTGTCCCTaGATATCATCACGTTGTGCC +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKGCWCP*ISSRCA
Trigger: GGCACAACGTGATGATATCAAGGGACACCAGCAACC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AATGACTGCAGGTCAAGGATTCCAATAAGGAAACAGAAGGTTGCAGATGTTAGATTTACAGTGTGGAGGTaGCTGGTGTCCCTTGATATC +
Preference number: 5 (lower is better)
Translates to: NDCRSRIPIRKQKVADVRFTVWR*LVSLDI
Trigger: GATATCAAGGGACACCAGCAACCTCCACACTGTAAA...TCTAACATCTGCAACCTTCTGTTTCCTTATTGGAATCCTTGACCTGCAGTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGGCTCCGGCGGTGATTaGCGTTGTGATTTTTGTGTC +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKGSGGD*RCDFCV
Trigger: GACACAAAAATCACAACGCAAATCACCGCCGGAGCC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCAATATATAAGTCACTCTaGAGGTCTAAGTTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSIYKSL*RSKFLA
Trigger: AGCCAGGAACTTAGACCTCAAGAGTGACTTATATAT...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACTCTCGATCTGTCCGTaGCAGAAAAGAGCATCGGAG +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKLSICP*QKRASE
Trigger: CTCCGATGCTCTTTTCTGCAACGGACAGATCGAGAG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCACTCAAACCCAGCAGTaGCGAAATAGCCAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: SFQLQQPELRCRLTNFASTQTQQ*RNSQKL
Trigger: CAGCTTCTGGCTATTTCGCAACTGCTGGGTTTGAGT...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CAA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGCCAAAGCCTAATTCCTaGTGCGTGGTCTCACAAGTT +
Preference number: 5 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMPKPNS*CVVSQV
Trigger: AACTTGTGAGACCACGCACAAGGAATTAGGCTTTGG...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CAA 90 bp CCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATGTTTTCCAAAGCCTAATTCCTaGTGCGTGGTCTCACAAGTT +
Preference number: 5 (lower is better)
Translates to: PVSQHFHSVIHSNLPKCFPKPNS*CVVSQV
Trigger: AACTTGTGAGACCACGCACAAGGAATTAGGCTTTGG...AAAACATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR CAA 90 bp TTCAGAATAAACCAAGTACATCACTGCTTACCAACAGCACCTATGGCTAACAGTCCAAAGCCTAATTCCTaGTGCGTGGTCTCACAAGTT +
Preference number: 5 (lower is better)
Translates to: FRINQVHHCLPTAPMANSPKPNS*CVVSQV
Trigger: AACTTGTGAGACCACGCACAAGGAATTAGGCTTTGG...ACTGTTAGCCATAGGTGCTGTTGGTAAGCAGTGATGTACTTGGTTTATTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CAA 90 bp TTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATAAGGGAGGATGCACTTaGGAGACAACGTTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: LYQSHSTSILSFILTCPNKGGCT*ETTFWK
Trigger: TTTCCAGAACGTTGTCTCCAAAGTGCATCCTCCCTT...ATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGCCAGACCTTCCACATaGTTGTCTTCTTGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKARPST*LSSWLQ
Trigger: CTGCAGCCAAGAAGACAACAATGTGGAAGGTCTGGC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAAGCATATCTGATGGATaGCTGTGGATTCGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: AVVLLCFMNACGHHCLLESISDG*LWIRVC
Trigger: ACACACACGAATCCACAGCAATCCATCAGATATGCT...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAAGCATATCTGATGGATaGCTGTGGATTCGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLASISDG*LWIRVC
Trigger: ACACACACGAATCCACAGCAATCCATCAGATATGCT...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCAGCATATCTGATGGATaGCTGTGGATTCGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: LQQPELRCRLTNFASITCSISDG*LWIRVC
Trigger: ACACACACGAATCCACAGCAATCCATCAGATATGCT...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTACTACTGTATGCACGTTaGGATCTTCCAGCATATCTG +
Preference number: 5 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLLLYAR*DLPAYL
Trigger: CAGATATGCTGGAAGATCCAAACGTGCATACAGTAG...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCATTTGTCATCAATACCTaGGCACAACCCTCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAFVINT*AQPSSF
Trigger: GAAGGAAGAGGGTTGTGCCAAGGTATTGATGACAAA...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCTTTGTCATCAATACCTaGGCACAACCCTCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: LQQPELRCRLTNFASITCFVINT*AQPSSF
Trigger: GAAGGAAGAGGGTTGTGCCAAGGTATTGATGACAAA...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCGCAAGCGCTTCTAACTaGTCACCACCCTCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: CNNIISVHENFPMIASMPASASN*SPPSLP
Trigger: GGGAAGAGAGGGTGGTGACAAGTTAGAAGCGCTTGC...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406316.6
CDS-3UTR CAA 90 bp ACTTCTCAGGAAAGCGCTAGCACTTTGGCTAAATCCAGGATCATAGGTAGCTTCGTACACAACAATTACTaGGCAACCATAGATAGTGGT +
Preference number: 5 (lower is better)
Translates to: TSQESASTLAKSRIIGSFVHNNY*ATIDSG
Trigger: ACCACTATCTATGGTTGCCAAGTAATTGTTGTGTAC...GAAGCTACCTATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTCCTGAGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp CTGAATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATCTTTACTTTTACCTaGGTCGCCCATCATCAGGTG +
Preference number: 5 (lower is better)
Translates to: LNSYFTLYQSHSTSILSFIFTFT*VAHHQV
Trigger: CACCTGATGATGGGCGACCAAGGTAAAAGTAAAGAT...GAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR CAA 90 bp CTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTTGCTTTCATGCTGGATaGGTGACCCTGGAAGGTCGG +
Preference number: 5 (lower is better)
Translates to: LSPKPNKFQSYTKLQYTTCFHAG*VTLEGR
Trigger: CCGACCTTCCAGGGTCACCAATCCAGCATGAAAGCA...AGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625891.2
CDS GCA 90 bp TCAGCTTCTCTCTTCTTCCACCTCATTGGTCAGTGCAAATCCAACTaGTCTTTAAGACTCTTAACTTCAGCCAGTCCTCTTTACTTTTAC +
Preference number: 5 (lower is better)
Translates to: SASLFFHLIGQCKSN*SLRLLTSASPLYFY
Trigger: GTAAAAGTAAAGAGGACTGGCTGAAGTTAAGAGTCTTAAAGAGCAGTTGGATTTGCACTGACCAATGAGGTGGAAGAAGAGAGAAGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630431.1
CDS GCA 90 bp ATTTCAAGTTTCTCTTTACTTTTACCTTGGTCGCCCATCATCAGGTaGGCCAGACCTTCCACATTGTTGTCTTTTTCTGTTAGAGGCTTT +
Preference number: 5 (lower is better)
Translates to: ISSFSLLLPWSPIIR*ARPSTLLSFSVRGF
Trigger: AAAGCCTCTAACAGAAAAAGACAACAATGTGGAAGGTCTGGCGCACCTGATGATGGGCGACCAAGGTAAAAGTAAAGAGAAACTTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627198.2
CDS-3UTR CAA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTATTTGTCCACCACCTTaGCTAAAGATATATGTCGTC +
Preference number: 5 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTICPPP*LKIYVV
Trigger: GACGACATATATCTTTAGCAAAGGTGGTGGACAAAT...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACAAAAGCATTCTGCCACTTATACGTGATTaGTCCACCACCTTTGCTAAA +
Preference number: 5 (lower is better)
Translates to: KGHLCSFKHSSCLHKSILPLIRD*STTFAK
Trigger: TTTAGCAAAGGTGGTGGACAAATCACGTATAAGTGG...CAGAATGCTTTTGTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CAA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCTTTCGCACTGCTGGGTaGTTTCTCCTTTACAACAGC +
Preference number: 5 (lower is better)
Translates to: SFQLQQPELRCRLTNFASFRTAG*FLLYNS
Trigger: GCTGTTGTAAAGGAGAAACAACCCAGCAGTGCGAAA...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp CAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGACTTCTCATGTCCATTTAAGATCTaGGGATCAGACATAATACTC +
Preference number: 5 (lower is better)
Translates to: QVESLKRTVFSGNWTDFSCPFKI*GSDIIL
Trigger: GAGTATTATGTCTGATCCCAAGATCTTAAATGGACA...TGAGAAGTCAGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCTGCTGTAGTACTCCTTaGCTTTATGAATGCGTGCGG +
Preference number: 5 (lower is better)
Translates to: SFQLQQPELRCRLTNFASCCSTP*LYECVR
Trigger: CCGCACGCATTCATAAAGCAAAGGAGTACTACAGCA...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAGTGTTGGTTTTTGTGTaGTGCCTTGATGCTGTAGTA +
Preference number: 5 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEVLVFV*CLDAVV
Trigger: TACTACAGCATCAAGGCACAACACAAAAACCAACAC...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
CDS-3UTR CAA 90 bp GTGTTGTGCCTTGATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATGTGTTATGTTTTGTGTaGGTTTTTGTGTTGTGCCTT +
Preference number: 5 (lower is better)
Translates to: VLCLDAVVLLCFMNACGHVLCFV*VFVLCL
Trigger: AAGGCACAACACAAAAACCAACACAAAACATAACAC...ATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATCAAGGCACAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GGCGGCAAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTGTGTTATGTTTTGTGTaGGTTTTTGTGTTGTGCCTT +
Preference number: 5 (lower is better)
Translates to: GGKLLKVCRLSHSKGQSSVLCFV*VFVLCL
Trigger: AAGGCACAACACAAAAACCAACACAAAACATAACAC...AGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTGCCGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTCAAACTCTTAAAGGTTaGCAGGTTGAGTCACTCAAA +
Preference number: 5 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTQTLKG*QVESLK
Trigger: TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTG...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGCCAGAAAGGGGCTTTTaGAATGTGTTCCTACACAAG +
Preference number: 5 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTEPERGF*NVFLHK
Trigger: CTTGTGTAGGAACACATTCAAAAAGCCCCTTTCTGG...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATCCCATCCACTGATATaGTCACCTGACGCAGATTCC +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKSHPLI*SPDADS
Trigger: GGAATCTGCGTCAGGTGACAATATCAGTGGATGGGA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405472.7
ENST00000625672.2
CDS-3UTR CAA 90 bp AATGACTGCAGGTCAAGGATTCCAATAAGGAAACAGAAGGTTGCAGATGTTAGATTAGGATCTCCTTGCTaGGCAAGTCGAGATAATTCC +
Preference number: 5 (lower is better)
Translates to: NDCRSRIPIRKQKVADVRLGSPC*ASRDNS
Trigger: GGAATTATCTCGACTTGCCAAGCAAGGAGATCCTAA...TCTAACATCTGCAACCTTCTGTTTCCTTATTGGAATCCTTGACCTGCAGTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGGAGTACGCAACGTGTaGACAGAAATGGTACCTGAC +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKGVRNV*TEMVPD
Trigger: GTCAGGTACCATTTCTGTCAACACGTTGCGTACTCC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp ATATTATACTTCAAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACTCCCTGCACATGCCATaGTTTTTGCAAGGGTTGCTA +
Preference number: 5 (lower is better)
Translates to: ILYFKGHLCSFKHSSCLHSLHMP*FLQGLL
Trigger: TAGCAACCCTTGCAAAAACAATGGCATGTGCAGGGA...GTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTTGAAGTATAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAATGATCACCTGCCATTaGACCTGTCATGGCCTGTTG +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKMITCH*TCHGLL
Trigger: CAACAGGCCATGACAGGTCAAATGGCAGGTGATCAT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCACTCTCGATCTGTCCGTaGCAGAAAAGAGCATCGGAG +
Preference number: 5 (lower is better)
Translates to: SYYVTELDFESNIILQRPLSICP*QKRASE
Trigger: CTCCGATGCTCTTTTCTGCAACGGACAGATCGAGAG...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CAA 90 bp ATATTATACTTCAAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACGAAGCCATCCCATTGTaGCAAGCACACACCTTGATT +
Preference number: 5 (lower is better)
Translates to: ILYFKGHLCSFKHSSCLHEAIPL*QAHTLI
Trigger: AATCAAGGTGTGTGCTTGCAACAATGGGATGGCTTC...GTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTTGAAGTATAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CAA 90 bp AAACTCTTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCACAGCACATCAATTGGTaGTGTGTTGGTGATGCATTT +
Preference number: 5 (lower is better)
Translates to: KLLKVCRLSHSKGQSSLAQHINW*CVGDAF
Trigger: AAATGCATCACCAACACACAACCAATTGATGTGCTG...TGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CAA 90 bp CTGAATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCCAGCACATCAATTGGTaGTGTGTTGGTGATGCATTT +
Preference number: 5 (lower is better)
Translates to: LNSYFTLYQSHSTSILSFQHINW*CVGDAF
Trigger: AAATGCATCACCAACACACAACCAATTGATGTGCTG...GAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAACTCAAACCCAGCAGTaGCGAAATAGCCAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKTQTQQ*RNSQKL
Trigger: CAGCTTCTGGCTATTTCGCAACTGCTGGGTTTGAGT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
CDS-3UTR CAA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAGCGTGGTCTCACAAGTaGGATTTTACTTCTCTTTTC +
Preference number: 5 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEAWSHK*DFTSLF
Trigger: GAAAAGAGAAGTAAAATCCAACTTGTGAGACCACGC...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CAA 90 bp GAAGAGGAACCTAATTCCTTCATAATGATCTATGAGCTGTTTCCCTCCCCCAATGCGTGGTCTCACAAGTaGGATTTTACTTCTCTTTTC +
Preference number: 5 (lower is better)
Translates to: EEEPNSFIMIYELFPSPNAWSHK*DFTSLF
Trigger: GAAAAGAGAAGTAAAATCCAACTTGTGAGACCACGC...ATTGGGGGAGGGAAACAGCTCATAGATCATTATGAAGGAATTAGGTTCCTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAGTGAGCCAGTATCCTaGGATGCTTGTGAATGCCTC +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKSEPVS*DACECL
Trigger: GAGGCATTCACAAGCATCCAAGGATACTGGCTCACT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAGACCTTCCACATTGTaGTCTTCTTGGCTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKRPSTL*SSWLQS
Trigger: GGACTGCAGCCAAGAAGACAACAATGTGGAAGGTCT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGCCAGACCTTCCACATaGTTGTCTTTTTCTGTTAGA +
Preference number: 5 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLARPST*LSFSVR
Trigger: TCTAACAGAAAAAGACAACAATGTGGAAGGTCTGGC...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404971.5
CDS-3UTR CAA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGCTACTGTATGCACGTTaGGATCTTCCAGCATATCTG +
Preference number: 5 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTELLYAR*DLPAYL
Trigger: CAGATATGCTGGAAGATCCAAACGTGCATACAGTAG...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTGTACACAACAATTACTaGGCAACCATAGATAGTGGT +
Preference number: 5 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTVHNNY*ATIDSG
Trigger: ACCACTATCTATGGTTGCCAAGTAATTGTTGTGTAC...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp CCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATGTTTTATCTTTACTTTTACCTaGGTCGCCCATCATCAGGTG +
Preference number: 5 (lower is better)
Translates to: PVSQHFHSVIHSNLPKCFIFTFT*VAHHQV
Trigger: CACCTGATGATGGGCGACCAAGGTAAAAGTAAAGAT...AAAACATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR CAA 90 bp AAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACAAAAGCATTCTGATTTGTCCACCACCTTaGCTAAAGATATATGTCGTC +
Preference number: 5 (lower is better)
Translates to: KGHLCSFKHSSCLHKSILICPPP*LKIYVV
Trigger: GACGACATATATCTTTAGCAAAGGTGGTGGACAAAT...CAGAATGCTTTTGTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CAA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATTTGTCCACCACCTTaGCTAAAGATATATGTCGTC +
Preference number: 5 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEICPPP*LKIYVV
Trigger: GACGACATATATCTTTAGCAAAGGTGGTGGACAAAT...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
ENST00000637906.1
CDS-3UTR CAA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGCCACTTATACGTGATTaGTCCACCACCTTTGCTAAA +
Preference number: 5 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMPLIRD*STTFAK
Trigger: TTTAGCAAAGGTGGTGGACAAATCACGTATAAGTGG...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
ENST00000637906.1
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTTACAACAGCCCCATaGGACTGTGCTGAGTTACTG +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKFTTAP*DCAELL
Trigger: CAGTAACTCAGCACAGTCCAATGGGGCTGTTGTAAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 15 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000412315.5
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000630656.1
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTTCGCACTGCTGGGTaGTTTCTCCTTTACAACAGC +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKFRTAG*FLLYNS
Trigger: GCTGTTGTAAAGGAGAAACAACCCAGCAGTGCGAAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000412315.5
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000630656.1
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
CDS-3UTR CAA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAATTTCGCACTGCTGGGTaGTTTCTCCTTTACAACAGC +
Preference number: 5 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKFRTAG*FLLYNS
Trigger: GCTGTTGTAAAGGAGAAACAACCCAGCAGTGCGAAA...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp AAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACTTGTCCATTTAAGATCTaGGGATCAGACATAATACTC +
Preference number: 5 (lower is better)
Translates to: KGLQVESLKRTVFSGNWTCPFKI*GSDIIL
Trigger: GAGTATTATGTCTGATCCCAAGATCTTAAATGGACA...AGTCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAATGCTGTAGTACTCCTTaGCTTTATGAATGCGTGCGG +
Preference number: 5 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKCCSTP*LYECVR
Trigger: CCGCACGCATTCATAAAGCAAAGGAGTACTACAGCA...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGGTGTTGGTTTTTGTGTaGTGCCTTGATGCTGTAGTA +
Preference number: 5 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTEVLVFV*CLDAVV
Trigger: TACTACAGCATCAAGGCACAACACAAAAACCAACAC...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGTTAAAGGTTTGCAGGTaGAGTCACTCAAAAGGACAG +
Preference number: 5 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMLKVCR*SHSKGQ
Trigger: CTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GAAGAGGAACCTAATTCCTTCATAATGATCTATGAGCTGTTTCCCTCCCCCAATTCTGTACTAGGACATTaGCTTCCAGAAGTCATGAAA +
Preference number: 5 (lower is better)
Translates to: EEEPNSFIMIYELFPSPNSVLGH*LPEVMK
Trigger: TTTCATGACTTCTGGAAGCAAATGTCCTAGTACAGA...ATTGGGGGAGGGAAACAGCTCATAGATCATTATGAAGGAATTAGGTTCCTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625891.2
CDS-3UTR CAA 90 bp CCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGTCCCATCCACTGATATaGTCACCTGACGCAGATTCC +
Preference number: 5 (lower is better)
Translates to: PQNPTNSNLIQSYNTQLQSHPLI*SPDADS
Trigger: GGAATCTGCGTCAGGTGACAATATCAGTGGATGGGA...CTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000625891.2
ENST00000628515.2
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAGACAGCCCATAAAGTaGTTACTGACTGGTGACCCT +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKRQPIK*LLTGDP
Trigger: AGGGTCACCAGTCAGTAACAACTTTATGGGCTGTCT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAAAGACAGCCCATAAAGTaGTTACTGACTGGTGACCCT +
Preference number: 5 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKRQPIK*LLTGDP
Trigger: AGGGTCACCAGTCAGTAACAACTTTATGGGCTGTCT...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTTTGCTGTTTCCTTaGAGCAGGAAGGCTTCACTC +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKVLLFP*SRKASL
Trigger: GAGTGAAGCCTTCCTGCTCAAAGGAAACAGCAAAAC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp ATATTATACTTCAAAGGCCATCTATGTTCTTTCAAGCATAGCAGTTGCCTCCACTTGTTTTTGCAAGGGTaGCTAAGGCACGGTTTTGCT +
Preference number: 5 (lower is better)
Translates to: ILYFKGHLCSFKHSSCLHLFLQG*LRHGFA
Trigger: AGCAAAACCGTGCCTTAGCAACCCTTGCAAAAACAA...GTGGAGGCAACTGCTATGCTTGAAAGAACATAGATGGCCTTTGAAGTATAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACACATGCCATTGTTTTaGCAAGGGTTGCTAAGGCAC +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKHMPLF*QGLLRH
Trigger: GTGCCTTAGCAACCCTTGCAAAAACAATGGCATGTG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATCCCTGCACATGCCATaGTTTTTGCAAGGGTTGCTA +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKSLHMP*FLQGLL
Trigger: TAGCAACCCTTGCAAAAACAATGGCATGTGCAGGGA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCAGGACCTTTGCCTAGATaGACCGTCAGTTTCACACGT +
Preference number: 5 (lower is better)
Translates to: SYYVTELDFESNIILQRPGPLPR*TVSFTR
Trigger: ACGTGTGAAACTGACGGTCAATCTAGGCAAAGGTCC...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CAA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCAATGATCACCTGCCATTaGACCTGTCATGGCCTGTTG +
Preference number: 5 (lower is better)
Translates to: SYYVTELDFESNIILQRPMITCH*TCHGLL
Trigger: CAACAGGCCATGACAGGTCAAATGGCAGGTGATCAT...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CAA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCATGATCACCTGCCATTaGACCTGTCATGGCCTGTTG +
Preference number: 5 (lower is better)
Translates to: CNNIISVHENFPMIASMPMITCH*TCHGLL
Trigger: CAACAGGCCATGACAGGTCAAATGGCAGGTGATCAT...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTTACAGTGTGGAGGTaGCTGGTGTCCCTTGATATC +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKFTVWR*LVSLDI
Trigger: GATATCAAGGGACACCAGCAACCTCCACACTGTAAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCATATATAAGTCACTCTaGAGGTCTAAGTTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: LQQPELRCRLTNFASITCIYKSL*RSKFLA
Trigger: AGCCAGGAACTTAGACCTCAAGAGTGACTTATATAT...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGAATATATAAGTCACTCTaGAGGTCTAAGTTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGIYKSL*RSKFLA
Trigger: AGCCAGGAACTTAGACCTCAAGAGTGACTTATATAT...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGAAGCCATCCCATTGTaGCAAGCACACACCTTGATT +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKEAIPL*QAHTLI
Trigger: AATCAAGGTGTGTGCTTGCAACAATGGGATGGCTTC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATGTTTTCAGCACATCAATTGGTaGTGTGTTGGTGATGCATTT +
Preference number: 5 (lower is better)
Translates to: PVSQHFHSVIHSNLPKCFQHINW*CVGDAF
Trigger: AAATGCATCACCAACACACAACCAATTGATGTGCTG...AAAACATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACCAAAGCCTAATTCCTaGTGCGTGGTCTCACAAGTT +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKPKPNS*CVVSQV
Trigger: AACTTGTGAGACCACGCACAAGGAATTAGGCTTTGG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
CDS-3UTR CAA 90 bp CTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTAGTGAGCCAGTATCCTaGGATGCTTGTGAATGCCTC +
Preference number: 5 (lower is better)
Translates to: LSPKPNKFQSYTKLQYTTSEPVS*DACECL
Trigger: GAGGCATTCACAAGCATCCAAGGATACTGGCTCACT...AGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CAA 90 bp TTAGATATTACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGTCTTAACAGTGAGCCAGTATCCTaGGATGCTTGTGAATGCCTC +
Preference number: 5 (lower is better)
Translates to: LDITHQLVQVEELYPGLNSEPVS*DACECL
Trigger: GAGGCATTCACAAGCATCCAAGGATACTGGCTCACT...GTTAAGACCTGGATACAACTCTTCCACCTGAACTAATTGATGAGTAATATCTAA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAAGGGAGGATGCACTTaGGAGACAACGTTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKKGGCT*ETTFWK
Trigger: TTTCCAGAACGTTGTCTCCAAAGTGCATCCTCCCTT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
CDS-3UTR CAA 90 bp CTTGAGAGGAGGATGAAGAAGGTTATCAAAAGGCATGTTCTTTTTACATGTGTTAAGGGAGGATGCACTTaGGAGACAACGTTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: LERRMKKVIKRHVLFTCVKGGCT*ETTFWK
Trigger: TTTCCAGAACGTTGTCTCCAAAGTGCATCCTCCCTT...AACACATGTAAAAAGAACATGCCTTTTGATAACCTTCTTCATCCTCCTCTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405581.3
CDS-3UTR CAA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGCTGATACAATCTAGATaGACCGTCAGTTTCACACGT +
Preference number: 5 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMLIQSR*TVSFTR
Trigger: ACGTGTGAAACTGACGGTCAATCTAGATTGTATCAG...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GCACAGAAGGATCAACATCAACTCTGTAAGGACACATCACAAAGTGAGACCAGTAAAGTAAGGTTGGCTTaGAATAACAGATCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: AQKDQHQLCKDTSQSETSKVRLA*NNRSSA
Trigger: AGCTGAAGATCTGTTATTCAAAGCCAACCTTACTTT...ACTGGTCTCACTTTGTGATGTGTCCTTACAGAGTTGATGTTGATCCTTCTGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR CAA 90 bp GACTTCCCAGCCTCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACCCAGCAAAAGTAAGGTaGGCTTTGAATAACAGATCT +
Preference number: 5 (lower is better)
Translates to: DFPASRRLRNKFLLLTSYPAKVR*ALNNRS
Trigger: AGATCTGTTATTCAAAGCCAACCTTACTTTTGCTGG...GTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGAGGCTGGGAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TGTTTAATTCATTGTGATTCTGCCAGCCCACAGCAGTGGTCTCTAACATGTCTCCTAACAACAACATCATaGACAAATTTCAAGCCCCAA +
Preference number: 5 (lower is better)
Translates to: CLIHCDSASPQQWSLTCLLTTTS*TNFKPQ
Trigger: TTGGGGCTTGAAATTTGTCAATGATGTTGTTGTTAG...GAGACATGTTAGAGACCACTGCTGTGGGCTGGCAGAATCACAATGAATTAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
CDS-3UTR CAA 90 bp CACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCCTAACAACAACATCATaGACAAATTTCAAGCCCCAA +
Preference number: 5 (lower is better)
Translates to: HFVPVSQHFHSVIHSNLPLTTTS*TNFKPQ
Trigger: TTGGGGCTTGAAATTTGTCAATGATGTTGTTGTTAG...GGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR CAA 90 bp ACATGTCTCCAGCTGACTTCGCCATTTTTGTCATGTACACATGATAAGGGATTTGTTCAGGTGGAAGAGTaGTATCCAGGTCTTAACAAT +
Preference number: 5 (lower is better)
Translates to: TCLQLTSPFLSCTHDKGFVQVEE*YPGLNN
Trigger: ATTGTTAAGACCTGGATACAACTCTTCCACCTGAAC...AAATCCCTTATCATGTGTACATGACAAAAATGGCGAAGTCAGCTGGAGACATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR CAA 90 bp TTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATGTTCAGGTGGAAGAGTaGTATCCAGGTCTTAACAAT +
Preference number: 5 (lower is better)
Translates to: LYQSHSTSILSFILTCPNVQVEE*YPGLNN
Trigger: ATTGTTAAGACCTGGATACAACTCTTCCACCTGAAC...ATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR CAA 90 bp CTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTATATTCTTCTTTTCCTaGGCTGCAGTCCTTGCCGCG +
Preference number: 5 (lower is better)
Translates to: LSPKPNKFQSYTKLQYTTIFFFS*AAVLAA
Trigger: CGCGGCAAGGACTGCAGCCAAGGAAAAGAAGAATAT...AGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CAA 90 bp GAAGAGGAACCTAATTCCTTCATAATGATCTATGAGCTGTTTCCCTCCCCCAATACGATATTTACCTCTTaGAGACAGCCCATAAAGTTG +
Preference number: 5 (lower is better)
Translates to: EEEPNSFIMIYELFPSPNTIFTS*RQPIKL
Trigger: CAACTTTATGGGCTGTCTCAAAGAGGTAAATATCGT...ATTGGGGGAGGGAAACAGCTCATAGATCATTATGAAGGAATTAGGTTCCTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CAA 90 bp GATTTTAGTAACTGGAAGTTGTGCACTTCACAGACAAATTCGCTATATAGCAACACCTTTACTTTTACCTaGGTCGCCCATCATCAGGTG +
Preference number: 5 (lower is better)
Translates to: DFSNWKLCTSQTNSLYSNTFTFT*VAHHQV
Trigger: CACCTGATGATGGGCGACCAAGGTAAAAGTAAAGGT...GTTGCTATATAGCGAATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS GCA 90 bp CATTTAAATGCCACCACTCCATGGATCTTCATCTTAGGATCTCCTTaGTTGGCAAGTCGAGATAATTCCAGCCTCACATCATTATTTTTA +
Preference number: 5 (lower is better)
Translates to: HLNATTPWIFILGSP*LASRDNSSLTSLFL
Trigger: TAAAAATAATGATGTGAGGCTGGAATTATCTCGACTTGCCAAGCAAGGAGATCCTAAGATGAAGATCCATGGAGTGGTGGCATTTAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000331040.9
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000495871.2
ENST00000625672.2
ENST00000630543.2
ENST00000636298.1
CDS GCA 90 bp AAGCTCACAGTAATCTATGTCGCCATTTTTACACAGGTCAATGTATaGCATTCCATTAAATGTCAAGCTCTGCAGGTGTCCAATGAAGTT +
Preference number: 5 (lower is better)
Translates to: KLTVIYVAIFTQVNV*HSIKCQALQVSNEV
Trigger: AACTTCATTGGACACCTGCAGAGCTTGACATTTAATGGAATGGCATACATTGACCTGTGTAAAAATGGCGACATAGATTACTGTGAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000331040.9
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000462791.2
ENST00000625672.2
ENST00000630543.2
ENST00000636298.1
CDS GCA 90 bp GCTTCTTCATTAACAACATGTGGTTATGAGACTTGTCCTTCTCACTaGATACTCTTTTTCTTTGTGATTATCTGGGCCAAGTGTCTCCTA +
Preference number: 5 (lower is better)
Translates to: ASSLTTCGYETCPSH*ILFFFVIIWAKCLL
Trigger: TAGGAGACACTTGGCCCAGATAATCACAAAGAAAAAGAGTATGCAGTGAGAAGGACAAGTCTCATAACCACATGTTGTTAATGAAGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000416262.6
ENST00000447773.2
ENST00000636104.1
ENST00000637368.1
CDS-3UTR CAA 90 bp GTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAATGATTTGTCCACCACCTTaGCTAAAGATATATGTCGTC +
Preference number: 5 (lower is better)
Translates to: VVLLCFMNACGHHCLLEMICPPP*LKIYVV
Trigger: GACGACATATATCTTTAGCAAAGGTGGTGGACAAAT...CATTTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
ENST00000637906.1
CDS-3UTR CAA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCATTTACAACAGCCCCATaGGACTGTGCTGAGTTACTG +
Preference number: 5 (lower is better)
Translates to: CRLTNFASITCPHNGSYSFTTAP*DCAELL
Trigger: CAGTAACTCAGCACAGTCCAATGGGGCTGTTGTAAA...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTATGTCCATTTAAGATCTaGGGATCAGACATAATACTC +
Preference number: 5 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLCPFKI*GSDIIL
Trigger: GAGTATTATGTCTGATCCCAAGATCTTAAATGGACA...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
CDS-3UTR CAA 90 bp TTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCATAACCTGCTGTCCATTTAAGATCTaGGGATCAGACATAATACTC +
Preference number: 5 (lower is better)
Translates to: LQQPELRCRLTNFASITCCPFKI*GSDIIL
Trigger: GAGTATTATGTCTGATCCCAAGATCTTAAATGGACA...GCAGGTTATGGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGAGTGTTATGTTTTGTGTaGGTTTTTGTGTTGTGCCTT +
Preference number: 5 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGVLCFV*VFVLCL
Trigger: AAGGCACAACACAAAAACCAACACAAAACATAACAC...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp GCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTAGAAGTGTTATGTTTTGTGTaGGTTTTTGTGTTGTGCCTT +
Preference number: 5 (lower is better)
Translates to: AVVLLCFMNACGHHCLLEVLCFV*VFVLCL
Trigger: AAGGCACAACACAAAAACCAACACAAAACATAACAC...TTCTAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACCAGAAAGGGGCTTTTaGAATGTGTTCCTACACAAG +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKPERGF*NVFLHK
Trigger: CTTGTGTAGGAACACATTCAAAAAGCCCCTTTCTGG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCAGACAGCCCATAAAGTaGTTACTGACTGGTGACCCT +
Preference number: 5 (lower is better)
Translates to: CNNIISVHENFPMIASMPRQPIK*LLTGDP
Trigger: AGGGTCACCAGTCAGTAACAACTTTATGGGCTGTCT...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTACAGAGACAGCCCATAAAGTaGTTACTGACTGGTGACCCT +
Preference number: 5 (lower is better)
Translates to: PQNPTNSNLIQSYNTQLQRQPIK*LLTGDP
Trigger: AGGGTCACCAGTCAGTAACAACTTTATGGGCTGTCT...CTGTAGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CAA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAATTAGGATCTCCTTGCTaGGCAAGTCGAGATAATTCC +
Preference number: 5 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKLGSPC*ASRDNS
Trigger: GGAATTATCTCGACTTGCCAAGCAAGGAGATCCTAA...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTAGGATCTCCTTGCTaGGCAAGTCGAGATAATTCC +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKLGSPC*ASRDNS
Trigger: GGAATTATCTCGACTTGCCAAGCAAGGAGATCCTAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACCGGATATCTTTGCTTaGGCCATCGATGAACAAATC +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKPDIFA*AIDEQI
Trigger: GATTTGTTCATCGATGGCCAAAGCAAAGATATCCGG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAATTTGCCGGATATCTTaGCTTTGGCCATCGATGAAC +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKICRIS*LWPSMN
Trigger: GTTCATCGATGGCCAAAGCAAAGATATCCGGCAAAT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCGTTTTGCTGTTTCCTTaGAGCAGGAAGGCTTCACTC +
Preference number: 5 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSIVLLFP*SRKASL
Trigger: GAGTGAAGCCTTCCTGCTCAAAGGAAACAGCAAAAC...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTGTTTTTGCAAGGGTaGCTAAGGCACGGTTTTGCT +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKLFLQG*LRHGFA
Trigger: AGCAAAACCGTGCCTTAGCAACCCTTGCAAAAACAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCCACATGCCATTGTTTTaGCAAGGGTTGCTAAGGCAC +
Preference number: 5 (lower is better)
Translates to: CNNIISVHENFPMIASMPHMPLF*QGLLRH
Trigger: GTGCCTTAGCAACCCTTGCAAAAACAATGGCATGTG...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCTCCCTGCACATGCCATaGTTTTTGCAAGGGTTGCTA +
Preference number: 5 (lower is better)
Translates to: CNNIISVHENFPMIASMPSLHMP*FLQGLL
Trigger: TAGCAACCCTTGCAAAAACAATGGCATGTGCAGGGA...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AATGACTGCAGGTCAAGGATTCCAATAAGGAAACAGAAGGTTGCAGATGTTAGAATATATAAGTCACTCTaGAGGTCTAAGTTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: NDCRSRIPIRKQKVADVRIYKSL*RSKFLA
Trigger: AGCCAGGAACTTAGACCTCAAGAGTGACTTATATAT...TCTAACATCTGCAACCTTCTGTTTCCTTATTGGAATCCTTGACCTGCAGTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CAA 90 bp AATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTGCGTGGTCTCACAAGTaGGATTTTACTTCTCTTTTC +
Preference number: 5 (lower is better)
Translates to: NSYFTLYQSHSTSILSFIAWSHK*DFTSLF
Trigger: GAAAAGAGAAGTAAAATCCAACTTGTGAGACCACGC...AATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000626899.1
CDS-3UTR CAA 90 bp GGTAATATTAGATATTACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGCCAAAGCCTAATTCCTaGTGCGTGGTCTCACAAGTT +
Preference number: 5 (lower is better)
Translates to: GNIRYYSSISSGGRVVSRPKPNS*CVVSQV
Trigger: AACTTGTGAGACCACGCACAAGGAATTAGGCTTTGG...CCTGGATACAACTCTTCCACCTGAACTAATTGATGAGTAATATCTAATATTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR CAA 90 bp CTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACAACTAAGGGAGGATGCACTTaGGAGACAACGTTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: LSPKPNKFQSYTKLQYTTKGGCT*ETTFWK
Trigger: TTTCCAGAACGTTGTCTCCAAAGTGCATCCTCCCTT...AGTTGTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAATATTCTTCTTTTCCTaGGTCGCCCATCATCAGGTG +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKIFFFS*VAHHQV
Trigger: CACCTGATGATGGGCGACCAAGGAAAAGAAGAATAT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000405472.7
CDS-3UTR CAA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCCTGATACAATCTAGATaGACCGTCAGTTTCACACGT +
Preference number: 5 (lower is better)
Translates to: SFQLQQPELRCRLTNFASLIQSR*TVSFTR
Trigger: ACGTGTGAAACTGACGGTCAATCTAGATTGTATCAG...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAGCAAATCACCCCATTaGTCATCAATACCTTGGCAC +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKSKSPH*SSIPWH
Trigger: GTGCCAAGGTATTGATGACAAATGGGGTGATTTGCT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TTAAAGGTTTGCAGGTTGAGTCACTCAAAAGGACAGTCTTCTCTGGCAATTGGACCAATAATGGATAAATaGGCCTTGCAACAGAAAAAC +
Preference number: 5 (lower is better)
Translates to: LKVCRLSHSKGQSSLAIGPIMDK*ALQQKN
Trigger: GTTTTTCTGTTGCAAGGCCAATTTATCCATTATTGG...TCCAATTGCCAGAGAAGACTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000636345.1
CDS-3UTR CAA 90 bp GATGCTGTAGTACTCCTTTGCTTTATGAATGCGTGCGGTCATCACTGTCTTTTACCAATAATGGATAAATaGGCCTTGCAACAGAAAAAC +
Preference number: 5 (lower is better)
Translates to: DAVVLLCFMNACGHHCLLPIMDK*ALQQKN
Trigger: GTTTTTCTGTTGCAAGGCCAATTTATCCATTATTGG...TAAAAGACAGTGATGACCGCACGCATTCATAAAGCAAAGGAGTACTACAGCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000636345.1
CDS-3UTR CAA 90 bp AAATGTCCATTTGACTCTTTAAAATGGACAGTTGAAACCACCGCCCCCAAACAACTGACTTCGCCATTTTaGTCATGTACACATGATAAG +
Preference number: 5 (lower is better)
Translates to: KCPFDSLKWTVETTAPKQLTSPF*SCTHDK
Trigger: CTTATCATGTGTACATGACAAAAATGGCGAAGTCAG...TTGTTTGGGGGCGGTGGTTTCAACTGTCCATTTTAAAGAGTCAAATGGACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
CDS-3UTR CAA 90 bp ATATGCACCAAACACAGGCATTTCAACAGTAAGGGTCTGTCAACATTCACAAACCCAGCAAAAGTAAGGTaGGCTTTGAATAACAGATCT +
Preference number: 5 (lower is better)
Translates to: ICTKHRHFNSKGLSTFTNPAKVR*ALNNRS
Trigger: AGATCTGTTATTCAAAGCCAACCTTACTTTTGCTGG...GTTTGTGAATGTTGACAGACCCTTACTGTTGAAATGCCTGTGTTTGGTGCATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
CDS-3UTR CAA 90 bp ATTTGCAGCCATATAATTTGCAAGCATTTGCCCATCCTTTGCAGTGATGGTTTGATAATTTGCAAGCATTaGCCCATCCTTTGCAGTGAT +
Preference number: 5 (lower is better)
Translates to: ICSHIICKHLPILCSDGLIICKH*PILCSD
Trigger: ATCACTGCAAAGGATGGGCAAATGCTTGCAAATTAT...CAAACCATCACTGCAAAGGATGGGCAAATGCTTGCAAATTATATGGCTGCAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496792.3
CDS-3UTR CAA 90 bp TTAATTTGCAGCCATATAATTTGCAAGCATTTGCCCATCCTTTGCAGTGATGGTTTGCAGCCATATAATTaGCAAGCATTTGCCCATCCT +
Preference number: 5 (lower is better)
Translates to: LICSHIICKHLPILCSDGLQPYN*QAFAHP
Trigger: AGGATGGGCAAATGCTTGCAAATTATATGGCTGCAA...ACCATCACTGCAAAGGATGGGCAAATGCTTGCAAATTATATGGCTGCAAATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496792.3
CDS-3UTR CAA 90 bp CTTTCTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACTTAAAGTTGTGCCGTTaGACTCTGGAACATCGGGTC +
Preference number: 5 (lower is better)
Translates to: LSLPKTQQIPILYKVTIHLKLCR*TLEHRV
Trigger: GACCCGATGTTCCAGAGTCAAACGGCACAACTTTAA...GTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000625891.2
ENST00000628515.2
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAACTTTGTCTTTGCTCTaGTTCCTGCCTTGTCTAGCA +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKTLSLL*FLPCLA
Trigger: TGCTAGACAAGGCAGGAACAAGAGCAAAGACAAAGT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS-3UTR CAA 90 bp AATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTGACTATTCTATATGTTaGCCACAGCTGCATACCACT +
Preference number: 5 (lower is better)
Translates to: NSYFTLYQSHSTSILSFIDYSIC*PQLHTT
Trigger: AGTGGTATGCAGCTGTGGCAAACATATAGAATAGTC...AATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACCACTTATACGTGATTaGTCCACCACCTTTGCTAAA +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKPLIRD*STTFAK
Trigger: TTTAGCAAAGGTGGTGGACAAATCACGTATAAGTGG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000637906.1
CDS-3UTR CAA 90 bp TCTATACAACAGGCTATAAAACGTCACTTATCACAGTCCAGAAAGCACACAGAGTGTCCATTTAAGATCTaGGGATCAGACATAATACTC +
Preference number: 5 (lower is better)
Translates to: SIQQAIKRHLSQSRKHTECPFKI*GSDIIL
Trigger: GAGTATTATGTCTGATCCCAAGATCTTAAATGGACA...CTCTGTGTGCTTTCTGGACTGTGATAAGTGACGTTTTATAGCCTGTTGTATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGTTGGTTTTTGTGTaGTGCCTTGATGCTGTAGTA +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKVLVFV*CLDAVV
Trigger: TACTACAGCATCAAGGCACAACACAAAAACCAACAC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
CDS-3UTR CAA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCAGAAAGCGCTAGCACTTaGGCTAAATCCAGGATCATA +
Preference number: 5 (lower is better)
Translates to: CRLTNFASITCPHNGSYSESAST*AKSRII
Trigger: TATGATCCTGGATTTAGCCAAAGTGCTAGCGCTTTC...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTAAAGGTTTGCAGGTaGAGTCACTCAAAAGGACAG +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKLKVCR*SHSKGQ
Trigger: CTGTCCTTTTGAGTGACTCAACCTGCAAACCTTTAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TGTAGATTAACCAATTTTGCTTCCATAACCTGCCCACATAATGGTTCTTATTCACCAGAAAGGGGCTTTTaGAATGTGTTCCTACACAAG +
Preference number: 5 (lower is better)
Translates to: CRLTNFASITCPHNGSYSPERGF*NVFLHK
Trigger: CTTGTGTAGGAACACATTCAAAAAGCCCCTTTCTGG...TGAATAAGAACCATTATGTGGGCAGGTTATGGAAGCAAAATTGGTTAATCTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp AATGACTGCAGGTCAAGGATTCCAATAAGGAAACAGAAGGTTGCAGATGTTAGATTATATACAACCTCTTaGAGACAGCCCATAAAGTTG +
Preference number: 5 (lower is better)
Translates to: NDCRSRIPIRKQKVADVRLYTTS*RQPIKL
Trigger: CAACTTTATGGGCTGTCTCAAAGAGGTTGTATATAA...TCTAACATCTGCAACCTTCTGTTTCCTTATTGGAATCCTTGACCTGCAGTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CAA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCACCGGATATCTTTGCTTaGGCCATCGATGAACAAATC +
Preference number: 5 (lower is better)
Translates to: SYYVTELDFESNIILQRPPDIFA*AIDEQI
Trigger: GATTTGTTCATCGATGGCCAAAGCAAAGATATCCGG...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CAA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCAATTTGCCGGATATCTTaGCTTTGGCCATCGATGAAC +
Preference number: 5 (lower is better)
Translates to: SYYVTELDFESNIILQRPICRIS*LWPSMN
Trigger: GTTCATCGATGGCCAAAGCAAAGATATCCGGCAAAT...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTGAACTTCAGCCATTaGCCGGATATCTTTGCTTTG +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKLNFSH*PDIFAL
Trigger: CAAAGCAAAGATATCCGGCAAATGGCTGAAGTTCAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAATTGAACTTCAGCCATTaGCCGGATATCTTTGCTTTG +
Preference number: 5 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKLNFSH*PDIFAL
Trigger: CAAAGCAAAGATATCCGGCAAATGGCTGAAGTTCAA...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCTTGTTTTTGCAAGGGTaGCTAAGGCACGGTTTTGCT +
Preference number: 5 (lower is better)
Translates to: CNNIISVHENFPMIASMPLFLQG*LRHGFA
Trigger: AGCAAAACCGTGCCTTAGCAACCCTTGCAAAAACAA...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp GTGTGTGTGAAAATAGTGAATGTATGTGGGAATGTGAGTATTTCAGGGAGAAAACAGCACATCAATTGGTaGTGTGTTGGTGATGCATTT +
Preference number: 5 (lower is better)
Translates to: VCVKIVNVCGNVSISGRKQHINW*CVGDAF
Trigger: AAATGCATCACCAACACACAACCAATTGATGTGCTG...TTTTCTCCCTGAAATACTCACATTCCCACATACATTCACTATTTTCACACACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACAGCACATCAATTGGTaGTGTGTTGGTGATGCATTT +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKQHINW*CVGDAF
Trigger: AAATGCATCACCAACACACAACCAATTGATGTGCTG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGCGTGGTCTCACAAGTaGGATTTTACTTCTCTTTTC +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKAWSHK*DFTSLF
Trigger: GAAAAGAGAAGTAAAATCCAACTTGTGAGACCACGC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACTGATACAATCTAGATaGACCGTCAGTTTCACACGT +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKLIQSR*TVSFTR
Trigger: ACGTGTGAAACTGACGGTCAATCTAGATTGTATCAG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCGTACACAACAATTACTaGGCAACCATAGATAGTGGT +
Preference number: 5 (lower is better)
Translates to: SFQLQQPELRCRLTNFASVHNNY*ATIDSG
Trigger: ACCACTATCTATGGTTGCCAAGTAATTGTTGTGTAC...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCCGCTGGGGAGAAACATaGAAATCAATCCCAAACAAC +
Preference number: 5 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSIRWGET*KSIPNN
Trigger: GTTGTTTGGGATTGATTTCAATGTTTCTCCCCAGCG...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp ATTCCTACTTCACTTTGTACCAGTCTCACAGCACTTCCATTCTGTCATTCATTCAAAGTAAGGTTGGCTTaGAATAACAGATCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: IPTSLCTSLTALPFCHSFKVRLA*NNRSSA
Trigger: AGCTGAAGATCTGTTATTCAAAGCCAACCTTACTTT...GAATGAATGACAGAATGGAAGTGCTGTGAGACTGGTACAAAGTGAAGTAGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR CAA 90 bp TCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACCCAGTTTATGGTGTTCAGGTGGAAGAGTaGTATCCAGGTCTTAACAAT +
Preference number: 5 (lower is better)
Translates to: SRRLRNKFLLLTSYPVYGVQVEE*YPGLNN
Trigger: ATTGTTAAGACCTGGATACAACTCTTCCACCTGAAC...ACCATAAACTGGGTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACCCAGTTTATGGTCCAGCCTCCAGACGTTaGAGAAATAAGTTTCTGTTA +
Preference number: 5 (lower is better)
Translates to: SRRLRNKFLLLTSYPVYGPASRR*RNKFLL
Trigger: TAACAGAAACTTATTTCTCAAACGTCTGGAGGCTGG...ACCATAAACTGGGTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCCCACTTATACGTGATTaGTCCACCACCTTTGCTAAA +
Preference number: 5 (lower is better)
Translates to: CNNIISVHENFPMIASMPPLIRD*STTFAK
Trigger: TTTAGCAAAGGTGGTGGACAAATCACGTATAAGTGG...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACAAACTCTTAAAGGTTaGCAGGTTGAGTCACTCAAA +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKQTLKG*QVESLK
Trigger: TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCATTGAACTTCAGCCATTaGCCGGATATCTTTGCTTTG +
Preference number: 5 (lower is better)
Translates to: SYYVTELDFESNIILQRPLNFSH*PDIFAL
Trigger: CAAAGCAAAGATATCCGGCAAATGGCTGAAGTTCAA...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CAA 90 bp AGTTTTCAATTGCAGCAGCCAGAGTTAAGGTGTAGATTAACCAATTTTGCTTCCTTATTTGAGCTTCCTTaGATGAGGTTAGCACCATTT +
Preference number: 5 (lower is better)
Translates to: SFQLQQPELRCRLTNFASLFELP*MRLAPF
Trigger: AAATGGTGCTAACCTCATCAAAGGAAGCTCAAATAA...GGAAGCAAAATTGGTTAATCTACACCTTAACTCTGGCTGCTGCAATTGAAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAATATATAAGTCACTCTaGAGGTCTAAGTTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKIYKSL*RSKFLA
Trigger: AGCCAGGAACTTAGACCTCAAGAGTGACTTATATAT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp CTTTCTCTCCCCAAAACCCAACAAATTCCAATCTTATACAAAGTTACAATACACCAGCACATCAATTGGTaGTGTGTTGGTGATGCATTT +
Preference number: 5 (lower is better)
Translates to: LSLPKTQQIPILYKVTIHQHINW*CVGDAF
Trigger: AAATGCATCACCAACACACAACCAATTGATGTGCTG...GTGTATTGTAACTTTGTATAAGATTGGAATTTGTTGGGTTTTGGGGAGAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS-3UTR CAA 90 bp ACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGTCTTAACAATTACAATGCGTGGTCTCACAAGTaGGATTTTACTTCTCTTTTC +
Preference number: 5 (lower is better)
Translates to: THQLVQVEELYPGLNNYNAWSHK*DFTSLF
Trigger: GAAAAGAGAAGTAAAATCCAACTTGTGAGACCACGC...ATTGTAATTGTTAAGACCTGGATACAACTCTTCCACCTGAACTAATTGATGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000637511.1
CDS-3UTR CAA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCGCGTGGTCTCACAAGTaGGATTTTACTTCTCTTTTC +
Preference number: 5 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSIAWSHK*DFTSLF
Trigger: GAAAAGAGAAGTAAAATCCAACTTGTGAGACCACGC...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000401669.7
ENST00000406316.6
CDS-3UTR CAA 90 bp TATTTAATTTGCAGCCATATAATTTGCAAGCATTTGCCCATCCTTTGCAGTGATCTTTGCAGTGATGGTTaGAAAGCAGCTACAGAACAA +
Preference number: 5 (lower is better)
Translates to: YLICSHIICKHLPILCSDLCSDG*KAATEQ
Trigger: TTGTTCTGTAGCTGCTTTCAAACCATCACTGCAAAG...ATCACTGCAAAGGATGGGCAAATGCTTGCAAATTATATGGCTGCAAATTAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496792.3
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAATGCCAAGGCATTTTaGCTTTTCTCGAGAATAAGG +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKNAKAF*LFSRIR
Trigger: CCTTATTCTCGAGAAAAGCAAAAATGCCTTGGCATT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000630656.1
CDS-3UTR CAA 90 bp GTCTCACAGCACTTCCATTCTGTCATTCATTCTAACTTGCCCAAATGTTTTCATATCATTTCTTACATATaGCCTGGCTCATGTTCAGAT +
Preference number: 5 (lower is better)
Translates to: VSQHFHSVIHSNLPKCFHIISYI*PGSCSD
Trigger: ATCTGAACATGAGCCAGGCAATATGTAAGAAATGAT...ATGAAAACATTTGGGCAAGTTAGAATGAATGACAGAATGGAAGTGCTGTGAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS GCA 90 bp TATTTAATTTGCAGCCATATAATTTGCAAGCATTTGCCCATCCTTTaGAGTGATGGTTTGAAAGCAGCTACAGAACAAGAAAACACTGAA +
Preference number: 5 (lower is better)
Translates to: YLICSHIICKHLPIL*SDGLKAATEQENTE
Trigger: TTCAGTGTTTTCTTGTTCTGTAGCTGCTTTCAAACCATCACTGCAAAGGATGGGCAAATGCTTGCAAATTATATGGCTGCAAATTAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496792.3
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATGTCCATTTAAGATCTaGGGATCAGACATAATACTC +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKCPFKI*GSDIIL
Trigger: GAGTATTATGTCTGATCCCAAGATCTTAAATGGACA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000342183.9
ENST00000378262.7
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000412315.5
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000630656.1
ENST00000635519.1
ENST00000636345.1
ENST00000637906.1
CDS-3UTR CAA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCCAAACTCTTAAAGGTTaGCAGGTTGAGTCACTCAAA +
Preference number: 5 (lower is better)
Translates to: CNNIISVHENFPMIASMPQTLKG*QVESLK
Trigger: TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTG...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342183.9
ENST00000401669.7
ENST00000404971.5
ENST00000406316.6
ENST00000412315.5
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCCAAACTCTTAAAGGTTaGCAGGTTGAGTCACTCAAA +
Preference number: 5 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSIQTLKG*QVESLK
Trigger: TTTGAGTGACTCAACCTGCAAACCTTTAAGAGTTTG...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCATCTGTACTAGGACATTaGCTTCCAGAAGTCATGAAA +
Preference number: 5 (lower is better)
Translates to: SYYVTELDFESNIILQRPSVLGH*LPEVMK
Trigger: TTTCATGACTTCTGGAAGCAAATGTCCTAGTACAGA...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTATATACAACCTCTTaGAGACAGCCCATAAAGTTG +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKLYTTS*RQPIKL
Trigger: CAACTTTATGGGCTGTCTCAAAGAGGTTGTATATAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTATTTGAGCTTCCTTaGATGAGGTTAGCACCATTT +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKLFELP*MRLAPF
Trigger: AAATGGTGCTAACCTCATCAAAGGAAGCTCAAATAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
CDS-3UTR CAA 90 bp TTAGATATTACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGTCTTAACCCAGCAAAAGTAAGGTaGGCTTTGAATAACAGATCT +
Preference number: 5 (lower is better)
Translates to: LDITHQLVQVEELYPGLNPAKVR*ALNNRS
Trigger: AGATCTGTTATTCAAAGCCAACCTTACTTTTGCTGG...GTTAAGACCTGGATACAACTCTTCCACCTGAACTAATTGATGAGTAATATCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
CDS-3UTR CAA 90 bp CTTGAGAGGAGGATGAAGAAGGTTATCAAAAGGCATGTTCTTTTTACATGTGTTTTTCATGAAGACTATTaGAATCCATCTACCCACAAC +
Preference number: 5 (lower is better)
Translates to: LERRMKKVIKRHVLFTCVFHEDY*NPSTHN
Trigger: GTTGTGGGTAGATGGATTCAAATAGTCTTCATGAAA...AACACATGTAAAAAGAACATGCCTTTTGATAACCTTCTTCATCCTCCTCTCAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000405581.3
ENST00000675235.1
CDS-3UTR CAA 90 bp TCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACCCAGTTTATGGTTTTCATGAAGACTATTaGAATCCATCTACCCACAAC +
Preference number: 5 (lower is better)
Translates to: SRRLRNKFLLLTSYPVYGFHEDY*NPSTHN
Trigger: GTTGTGGGTAGATGGATTCAAATAGTCTTCATGAAA...ACCATAAACTGGGTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TCCAGACGTTTGAGAAATAAGTTTCTGTTACTTACAAGCTACCCAGTTTATGGTTTTAGTAACTGGAAGTaGTGCACTTCACAGACAAAT +
Preference number: 5 (lower is better)
Translates to: SRRLRNKFLLLTSYPVYGFSNWK*CTSQTN
Trigger: ATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAA...ACCATAAACTGGGTAGCTTGTAAGTAACAGAAACTTATTTCTCAAACGTCTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp TCCTTCCTGATTGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAACAGCGTGCATAAATTaGACATGCAATCTTCAAGAA +
Preference number: 5 (lower is better)
Translates to: SFLIAFPVFFCMCFIKRKTACIN*TCNLQE
Trigger: TTCTTGAAGATTGCATGTCAAATTTATGCACGCTGT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCAATCAGGAAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000630656.1
CDS-3UTR CAA 90 bp TTAGATATTACTCATCAATTAGTTCAGGTGGAAGAGTTGTATCCAGGTCTTAACGGGTACCAATGTGATTaGCAAAATACTCAAGTCCAT +
Preference number: 5 (lower is better)
Translates to: LDITHQLVQVEELYPGLNGYQCD*QNTQVH
Trigger: ATGGACTTGAGTATTTTGCAAATCACATTGGTACCC...GTTAAGACCTGGATACAACTCTTCCACCTGAACTAATTGATGAGTAATATCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS-3UTR CAA 90 bp TTACAGTCTAGAGATGTAATCAAATTTATGCCAAGTCGTGTGAAATCCTCAATCGTGTTATGTTTTGTGTaGGTTTTTGTGTTGTGCCTT +
Preference number: 5 (lower is better)
Translates to: LQSRDVIKFMPSRVKSSIVLCFV*VFVLCL
Trigger: AAGGCACAACACAAAAACCAACACAAAACATAACAC...GATTGAGGATTTCACACGACTTGGCATAAATTTGATTACATCTCTAGACTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000635519.1
ENST00000636345.1
CDS-3UTR CAA 90 bp AGCTACTATGTGACGGAACTTGACTTTGAATCAAATATTATACTTCAAAGGCCATTATTTGAGCTTCCTTaGATGAGGTTAGCACCATTT +
Preference number: 5 (lower is better)
Translates to: SYYVTELDFESNIILQRPLFELP*MRLAPF
Trigger: AAATGGTGCTAACCTCATCAAAGGAAGCTCAAATAA...TGGCCTTTGAAGTATAATATTTGATTCAAAGTCAAGTTCCGTCACATAGTAGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331040.9
CDS-3UTR CAA 90 bp TGTAATAACATAATAAGCGTGCATGAAAATTTCCCAATGATTGCATCTATGCCCCCAATAATGGATAAATaGGCCTTGCAACAGAAAAAC +
Preference number: 5 (lower is better)
Translates to: CNNIISVHENFPMIASMPPIMDK*ALQQKN
Trigger: GTTTTTCTGTTGCAAGGCCAATTTATCCATTATTGG...GGGCATAGATGCAATCATTGGGAAATTTTCATGCACGCTTATTATGTTATTACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000636345.1
CDS-3UTR CAA 90 bp AGATCTACTCTTCACAAAGAGAATAAGGCTTATGCACTTTCAGAATGTGTAACTTTTAGTAACTGGAAGTaGTGCACTTCACAGACAAAT +
Preference number: 5 (lower is better)
Translates to: RSTLHKENKAYALSECVTFSNWK*CTSQTN
Trigger: ATTTGTCTGTGAAGTGCACAACTTCCAGTTACTAAA...AGTTACACATTCTGAAAGTGCATAAGCCTTATTCTCTTTGTGAAGAGTAGATCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405581.3
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS-3UTR CAA 90 bp AACTACTTTGATCTCTATTTGAATTCCCGGCCATTCAAAGTTCCTTGTCATTTTAAAGTAACTTTCCAATaGAGGGTTAGTTGTTCTACG +
Preference number: 5 (lower is better)
Translates to: NYFDLYLNSRPFKVPCHFKVTFQ*RVSCST
Trigger: CGTAGAACAACTAACCCTCAATTGGAAAGTTACTTT...AAAATGACAAGGAACTTTGAATGGCCGGGAATTCAAATAGAGATCAAAGTAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626249.2
CDS-3UTR CAA 90 bp AACTACTTTGATCTCTATTTGAATTCCCGGCCATTCAAAGTTCCTTGTCATTTTTACTTTGATCTCTATTaGAATTCCCGGCCATTCAAA +
Preference number: 5 (lower is better)
Translates to: NYFDLYLNSRPFKVPCHFYFDLY*NSRPFK
Trigger: TTTGAATGGCCGGGAATTCAAATAGAGATCAAAGTA...AAAATGACAAGGAACTTTGAATGGCCGGGAATTCAAATAGAGATCAAAGTAGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626249.2
CDS CCA 72 bp CCAGCTCGGCGCCGCACCGGAGCATCCTCTGGTACATaGCGGGGCGCCCGCCGAGGGGCAGCCGCCGCGGGA +
Preference number: 6 (lower is better)
Translates to: PARRRTGASSGT*RGARRGAAAAG
Trigger: TCCCGCGGCGGCTGCCCCTCGGCGGGCGCCCCGCCATGTACCAGAGGATGCTCCGGTGCGGCGCCGAGCTGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000628364.2
CDS CCA 72 bp GGCGAGCCCAGCTCGGCGCCGCACCGGAGCATCCTCTaGTACATGGCGGGGCGCCCGCCGAGGGGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: GEPSSAPHRSIL*YMAGRPPRGSR
Trigger: GCGGCTGCCCCTCGGCGGGCGCCCCGCCATGTACCAGAGGATGCTCCGGTGCGGCGCCGAGCTGGGCTCGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000628364.2
CDS CCA 72 bp GAGAGCGGCGGGCCCGTCCTTTGGCTGGGGAATGGGTaGGCTCGGCCCGTGGTCGCAGCCCCTCCAGGTCTG +
Preference number: 6 (lower is better)
Translates to: ESGGPVLWLGNG*ARPVVAAPPGL
Trigger: CAGACCTGGAGGGGCTGCGACCACGGGCCGAGCCCACCCATTCCCCAGCCAAAGGACGGGCCCGCCGCTCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404971.5
ENST00000406316.6
ENST00000626899.1
CDS CCA 72 bp CATGGAGAGCGGCGGGCCCGTCCTTTGGCTGGGGAATaGGTGGGCTCGGCCCGTGGTCGCAGCCCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: HGERRARPLAGE*VGSARGRSPSR
Trigger: CCTGGAGGGGCTGCGACCACGGGCCGAGCCCACCCATTCCCCAGCCAAAGGACGGGCCCGCCGCTCTCCATG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404971.5
ENST00000406316.6
ENST00000626899.1
CDS CAA 72 bp ACGGCCTGGTCGTCCACCACGGAGCACACACCTCCGTaGAGGCACACCCCGCCCTCGCCCTCCTCGCCCGCC +
Preference number: 6 (lower is better)
Translates to: TAWSSTTEHTPP*RHTPPSPSSPA
Trigger: GGCGGGCGAGGAGGGCGAGGGCGGGGTGTGCCTCAACGGAGGTGTGTGCTCCGTGGTGGACGACCAGGCCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000496792.3
ENST00000625672.2
ENST00000626899.1
ENST00000627198.2
ENST00000628515.2
ENST00000630543.2
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS CCA 72 bp AGCGGGACTATCCAAAGCGGAGCATCCTCTGGTACATaGCGGGGCGCCCGCCGAGGGGCAGCCGCCGCGGGA +
Preference number: 6 (lower is better)
Translates to: SGTIQSGASSGT*RGARRGAAAAG
Trigger: TCCCGCGGCGGCTGCCCCTCGGCGGGCGCCCCGCCATGTACCAGAGGATGCTCCGCTTTGGATAGTCCCGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611589.4
CDS CAA 90 bp GAGCTGAGCTCTCCGCAGTACCATGGAGAGCGGCGGGCCCGTCCTTaGGCTGGGGAATGGGTGGGCTCGGCCCGTGGTCGCAGCCCCTCC +
Preference number: 6 (lower is better)
Translates to: ELSSPQYHGERRARP*AGEWVGSARGRSPS
Trigger: GGAGGGGCTGCGACCACGGGCCGAGCCCACCCATTCCCCAGCCAAAGGACGGGCCCGCCGCTCTCCATGGTACTGCGGAGAGCTCAGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404971.5
ENST00000406316.6
ENST00000626899.1
CDS GCA 72 bp GTGGTGTTGCGGAACTGGCGGCGGATGCGCACGCTGTaGCAGGCGCCGTCGTTAACCGGCGTGTCGGCCAGG +
Preference number: 6 (lower is better)
Translates to: VVLRNWRRMRTL*QAPSLTGVSAR
Trigger: CCTGGCCGACACGCCGGTTAACGACGGCGCCTGGCACAGCGTGCGCATCCGCCGCCAGTTCCGCAACACCAC
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000625672.2
ENST00000626899.1
ENST00000628515.2
ENST00000630543.2
ENST00000637511.1
ENST00000675235.1
CDS CCA 72 bp TCGCAGCAGGCGTTCCACTTGGGGAAGCGCGTCCATTaGCCCTCGGCGCCCGGAAACTCCAGCCCGCTGCCC +
Preference number: 6 (lower is better)
Translates to: SQQAFHLGKRVH*PSAPGNSSPLP
Trigger: GGGCAGCGGGCTGGAGTTTCCGGGCGCCGAGGGCCAATGGACGCGCTTCCCCAAGTGGAACGCCTGCTGCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000625672.2
ENST00000626899.1
ENST00000628515.2
ENST00000630543.2
ENST00000637511.1
ENST00000675235.1
CDS CCA 72 bp CCGTCCTTTGGCTGGGGAATGGGTGGGCTCGGCCCGTaGTCGCAGCCCCTCCAGGTCTGGATGCTGCGGAGC +
Preference number: 6 (lower is better)
Translates to: PSFGWGMGGLGP*SQPLQVWMLRS
Trigger: GCTCCGCAGCATCCAGACCTGGAGGGGCTGCGACCACGGGCCGAGCCCACCCATTCCCCAGCCAAAGGACGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404971.5
ENST00000406316.6
ENST00000626899.1
CDS CAA 72 bp CTCGCAGCAGGCGTTCCACTTGGGGAAGCGCGTCCATaGGCCCTCGGCGCCCGGAAACTCCAGCCCGCTGCC +
Preference number: 6 (lower is better)
Translates to: LAAGVPLGEARP*ALGARKLQPAA
Trigger: GGCAGCGGGCTGGAGTTTCCGGGCGCCGAGGGCCAATGGACGCGCTTCCCCAAGTGGAACGCCTGCTGCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000625672.2
ENST00000626899.1
ENST00000628515.2
ENST00000630543.2
ENST00000637511.1
ENST00000675235.1
CDS CAA 72 bp TCTCCGCAGTACCATGGAGAGCGGCGGGCCCGTCCTTaGGCTGGGGAATGGGTGGGCTCGGCCCGTGGTCGC +
Preference number: 6 (lower is better)
Translates to: SPQYHGERRARP*AGEWVGSARGR
Trigger: GCGACCACGGGCCGAGCCCACCCATTCCCCAGCCAAAGGACGGGCCCGCCGCTCTCCATGGTACTGCGGAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404971.5
ENST00000406316.6
ENST00000626899.1
CDS CAA 90 bp CATCTCGCTCTCGCAGCAGGCGTTCCACTTGGGGAAGCGCGTCCATaGGCCCTCGGCGCCCGGAAACTCCAGCCCGCTGCCCAGCTCCGC +
Preference number: 6 (lower is better)
Translates to: HLALAAGVPLGEARP*ALGARKLQPAAQLR
Trigger: GCGGAGCTGGGCAGCGGGCTGGAGTTTCCGGGCGCCGAGGGCCAATGGACGCGCTTCCCCAAGTGGAACGCCTGCTGCGAGAGCGAGATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000625672.2
ENST00000626899.1
ENST00000628515.2
ENST00000630543.2
ENST00000637511.1
ENST00000675235.1
CDS CCA 72 bp CCGCGGAAGCCGGTTCGCGAGCAGTCGCACACGGCCTaGTCGTCCACCACGGAGCACACACCTCCGTTGAGG +
Preference number: 6 (lower is better)
Translates to: PRKPVREQSHTA*SSTTEHTPPLR
Trigger: CCTCAACGGAGGTGTGTGCTCCGTGGTGGACGACCAGGCCGTGTGCGACTGCTCGCGAACCGGCTTCCGCGG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000496792.3
ENST00000625672.2
ENST00000626899.1
ENST00000627198.2
ENST00000628515.2
ENST00000630543.2
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS CAA 90 bp ACCTCCACCCACTTGGCCTCCACCTGGTCGATGAAGAGCGTGGTGTaGCGGAACTGGCGGCGGATGCGCACGCTGTGCCAGGCGCCGTCG +
Preference number: 6 (lower is better)
Translates to: TSTHLASTWSMKSVV*RNWRRMRTLCQAPS
Trigger: CGACGGCGCCTGGCACAGCGTGCGCATCCGCCGCCAGTTCCGCAACACCACGCTCTTCATCGACCAGGTGGAGGCCAAGTGGGTGGAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000625672.2
ENST00000626899.1
ENST00000628515.2
ENST00000630543.2
ENST00000637511.1
ENST00000675235.1
CDS TCA 72 bp CCTGCTCCCGAGGCAATCTCCGCGTCCGCCGCCTCCTaGCACTTACGCCCGGCGAGGGGTTCAGAGGGAAGA +
Preference number: 6 (lower is better)
Translates to: PAPEAISASAAS*HLRPARGSEGR
Trigger: TCTTCCCTCTGAACCCCTCGCCGGGCGTAAGTGTCAGGAGGCGGCGGACGCGGAGATTGCCTCGGGAGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000628364.2
CDS CCA 72 bp TCCACCTGGTCGATGAAGAGCGTGGTGTTGCGGAACTaGCGGCGGATGCGCACGCTGTGCCAGGCGCCGTCG +
Preference number: 6 (lower is better)
Translates to: STWSMKSVVLRN*RRMRTLCQAPS
Trigger: CGACGGCGCCTGGCACAGCGTGCGCATCCGCCGCCAGTTCCGCAACACCACGCTCTTCATCGACCAGGTGGA
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000625672.2
ENST00000626899.1
ENST00000628515.2
ENST00000630543.2
ENST00000637511.1
ENST00000675235.1
CDS TCA 72 bp GGAGCGTCGCAGGCTCAGCGCAGAAGATGGAGAAGCTaGGCTGCAGGCGGCCGCCGCGCGTCAGAATCAGCT +
Preference number: 6 (lower is better)
Translates to: GASQAQRRRWRS*AAGGRRASESA
Trigger: AGCTGATTCTGACGCGCGGCGGCCGCCTGCAGCTCAGCTTCTCCATCTTCTGCGCTGAGCCTGCGACGCTCC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000625672.2
ENST00000626899.1
ENST00000628515.2
ENST00000630543.2
ENST00000637511.1
ENST00000675235.1
CDS TCA 72 bp GCCGGGTGCTGTCCTTCTGAAAGAGAAGGGCGGAGCTaGGCTCTCCGCAGTACCATGGAGAGCGGCGGGCCC +
Preference number: 6 (lower is better)
Translates to: AGCCPSEREGRS*ALRSTMESGGP
Trigger: GGGCCCGCCGCTCTCCATGGTACTGCGGAGAGCTCAGCTCCGCCCTTCTCTTTCAGAAGGACAGCACCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404971.5
ENST00000406316.6
ENST00000626899.1
CDS GCA 72 bp GTCGCAGGCTCAGCGCAGAAGATGGAGAAGCTGAGCTaGAGGCGGCCGCCGCGCGTCAGAATCAGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: VAGSAQKMEKLS*RRPPRVRISSR
Trigger: CCTGGAGCTGATTCTGACGCGCGGCGGCCGCCTGCAGCTCAGCTTCTCCATCTTCTGCGCTGAGCCTGCGAC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000625672.2
ENST00000626899.1
ENST00000628515.2
ENST00000630543.2
ENST00000637511.1
ENST00000675235.1
CDS CCA 72 bp GGAAGCTCATCTCGCTCTCGCAGCAGGCGTTCCACTTaGGGAAGCGCGTCCATTGGCCCTCGGCGCCCGGAA +
Preference number: 6 (lower is better)
Translates to: GSSSRSRSRRST*GSASIGPRRPE
Trigger: TTCCGGGCGCCGAGGGCCAATGGACGCGCTTCCCCAAGTGGAACGCCTGCTGCGAGAGCGAGATGAGCTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000625672.2
ENST00000626899.1
ENST00000628515.2
ENST00000630543.2
ENST00000637511.1
ENST00000675235.1
CDS CAA 72 bp TGGAAGCTCATCTCGCTCTCGCAGCAGGCGTTCCACTaGGGGAAGCGCGTCCATTGGCCCTCGGCGCCCGGA +
Preference number: 6 (lower is better)
Translates to: WKLISLSQQAFH*GKRVHWPSAPG
Trigger: TCCGGGCGCCGAGGGCCAATGGACGCGCTTCCCCAAGTGGAACGCCTGCTGCGAGAGCGAGATGAGCTTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000625672.2
ENST00000626899.1
ENST00000628515.2
ENST00000630543.2
ENST00000637511.1
ENST00000675235.1
CDS CAA 90 bp TCCAGCTTCACCTCGCCGCTGTCCACGGGCAGGACCTGCGAGGAGTaGACCCTCACGTCACGAATCCACCCCTTGAAGGGCTCCCGCTCC +
Preference number: 6 (lower is better)
Translates to: SSFTSPLSTGRTCEE*TLTSRIHPLKGSRS
Trigger: GGAGCGGGAGCCCTTCAAGGGGTGGATTCGTGACGTGAGGGTCAACTCCTCGCAGGTCCTGCCCGTGGACAGCGGCGAGGTGAAGCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000496792.3
ENST00000625672.2
ENST00000626899.1
ENST00000628515.2
ENST00000630543.2
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS GCA 72 bp TCCAGCTTCACCTCGCCGCTGTCCACGGGCAGGACCTaGGAGGAGTTGACCCTCACGTCACGAATCCACCCC +
Preference number: 6 (lower is better)
Translates to: SSFTSPLSTGRT*EELTLTSRIHP
Trigger: GGGGTGGATTCGTGACGTGAGGGTCAACTCCTCGCAGGTCCTGCCCGTGGACAGCGGCGAGGTGAAGCTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000496792.3
ENST00000625672.2
ENST00000626899.1
ENST00000628515.2
ENST00000630543.2
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS GCA 72 bp TCGGCCCGTGGTCGCAGCCCCTCCAGGTCTGGATGCTaGGGAGCGAGGTGCTTTTACCTTTGCATCGTCCCC +
Preference number: 6 (lower is better)
Translates to: SARGRSPSRSGC*GARCFYLCIVP
Trigger: GGGGACGATGCAAAGGTAAAAGCACCTCGCTCCGCAGCATCCAGACCTGGAGGGGCTGCGACCACGGGCCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406316.6
ENST00000626899.1
CDS GCA 72 bp GGCTCGGCCCGTGGTCGCAGCCCCTCCAGGTCTGGATaGTGCGGAGCGAGGTGCTTTTACCTTTGCATCGTC +
Preference number: 6 (lower is better)
Translates to: GSARGRSPSRSG*CGARCFYLCIV
Trigger: GACGATGCAAAGGTAAAAGCACCTCGCTCCGCAGCATCCAGACCTGGAGGGGCTGCGACCACGGGCCGAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406316.6
ENST00000626899.1
CDS GCA 72 bp CCCGGATCACTTCTGCTGAGCCTGGATACGGCTCTCTaGCGCCTGCTCGGGTTGGGTTGGCTGAGCTCGGCT +
Preference number: 6 (lower is better)
Translates to: PGSLLLSLDTAL*RLLGLGWLSSA
Trigger: AGCCGAGCTCAGCCAACCCAACCCGAGCAGGCGGCAGAGAGCCGTATCCAGGCTCAGCAGAAGTGATCCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000412315.5
ENST00000625672.2
ENST00000628364.2
ENST00000630656.1
ENST00000634412.1
ENST00000634431.1
ENST00000634764.1
CDS CAA 72 bp CACTTGGCCTCCACCTGGTCGATGAAGAGCGTGGTGTaGCGGAACTGGCGGCGGATGCGCACGCTGTGCCAG +
Preference number: 6 (lower is better)
Translates to: HLASTWSMKSVV*RNWRRMRTLCQ
Trigger: CTGGCACAGCGTGCGCATCCGCCGCCAGTTCCGCAACACCACGCTCTTCATCGACCAGGTGGAGGCCAAGTG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000625672.2
ENST00000626899.1
ENST00000628515.2
ENST00000630543.2
ENST00000637511.1
ENST00000675235.1
CDS CAA 90 bp GTCTTGAGCTGGAAGCTCATCTCGCTCTCGCAGCAGGCGTTCCACTaGGGGAAGCGCGTCCATTGGCCCTCGGCGCCCGGAAACTCCAGC +
Preference number: 6 (lower is better)
Translates to: VLSWKLISLSQQAFH*GKRVHWPSAPGNSS
Trigger: GCTGGAGTTTCCGGGCGCCGAGGGCCAATGGACGCGCTTCCCCAAGTGGAACGCCTGCTGCGAGAGCGAGATGAGCTTCCAGCTCAAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000625672.2
ENST00000626899.1
ENST00000628515.2
ENST00000630543.2
ENST00000637511.1
ENST00000675235.1
CDS GCA 72 bp TGTGTAGTTGGCTCACACCAGCTTGGCTGCAGTCCTTaGCGCGGAAGCCGGTTCGCGAGCAGTCGCACACGG +
Preference number: 6 (lower is better)
Translates to: CVVGSHQLGCSP*RGSRFASSRTR
Trigger: CCGTGTGCGACTGCTCGCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAGCTGGTGTGAGCCAACTACACA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637679.1
CDS CCA 72 bp AAAGAGAAGGGCGGAGCTGAGCTCTCCGCAGTACCATaGAGAGCGGCGGGCCCGTCCTTTGGCTGGGGAATG +
Preference number: 6 (lower is better)
Translates to: KEKGGAELSAVP*RAAGPSFGWGM
Trigger: CATTCCCCAGCCAAAGGACGGGCCCGCCGCTCTCCATGGTACTGCGGAGAGCTCAGCTCCGCCCTTCTCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404971.5
ENST00000406316.6
ENST00000626899.1
CDS CAA 90 bp AGGTGCGCCAGACCTTCCACATTGTTGTCTTCTTGGCTGCAGTCCTaGCCGCGGAAGCCGGTTCGCGAGCAGTCGCACACGGCCTGGTCG +
Preference number: 6 (lower is better)
Translates to: RCARPSTLLSSWLQS*PRKPVREQSHTAWS
Trigger: CGACCAGGCCGTGTGCGACTGCTCGCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAGAAGACAACAATGTGGAAGGTCTGGCGCACCT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000401669.7
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000625672.2
ENST00000630543.2
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS CAA 90 bp ATCAGGTGCGCCAGACCTTCCACATTGTTGTCTTGGCTGCAGTCCTaGCCGCGGAAGCCGGTTCGCGAGCAGTCGCACACGGCCTGGTCG +
Preference number: 6 (lower is better)
Translates to: IRCARPSTLLSWLQS*PRKPVREQSHTAWS
Trigger: CGACCAGGCCGTGTGCGACTGCTCGCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAGACAACAATGTGGAAGGTCTGGCGCACCTGAT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS GCA 72 bp GACACTTACGCCCGGCGAGGGGTTCAGAGGGAAGAGTaGGCCCTTCTGAAGGAAGTGGGAATCGAACGGCGG +
Preference number: 6 (lower is better)
Translates to: DTYARRGVQREE*ALLKEVGIERR
Trigger: CCGCCGTTCGATTCCCACTTCCTTCAGAAGGGCGCACTCTTCCCTCTGAACCCCTCGCCGGGCGTAAGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000628364.2
CDS GCA 72 bp CCAGACCTTCCACATTGTTGTCTTGGCTGCAGTCCTTaGCGCGGAAGCCGGTTCGCGAGCAGTCGCACACGG +
Preference number: 6 (lower is better)
Translates to: PDLPHCCLGCSP*RGSRFASSRTR
Trigger: CCGTGTGCGACTGCTCGCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAGACAACAATGTGGAAGGTCTGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS CCA 72 bp CGCTTGGACTTGACCTCCACCCACTTGGCCTCCACCTaGTCGATGAAGAGCGTGGTGTTGCGGAACTGGCGG +
Preference number: 6 (lower is better)
Translates to: RLDLTSTHLAST*SMKSVVLRNWR
Trigger: CCGCCAGTTCCGCAACACCACGCTCTTCATCGACCAGGTGGAGGCCAAGTGGGTGGAGGTCAAGTCCAAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000625672.2
ENST00000626899.1
ENST00000628515.2
ENST00000630543.2
ENST00000637511.1
ENST00000675235.1
CDS CAA 72 bp AGGCCGCTGAACACCGTCATGTCCCTGCGCTTGGACTaGACCTCCACCCACTTGGCCTCCACCTGGTCGATG +
Preference number: 6 (lower is better)
Translates to: RPLNTVMSLRLD*TSTHLASTWSM
Trigger: CATCGACCAGGTGGAGGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGGACATGACGGTGTTCAGCGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000625672.2
ENST00000626899.1
ENST00000628515.2
ENST00000630543.2
ENST00000637511.1
ENST00000675235.1
CDS CAA 72 bp GCCAGACCTTCCACATTGTTGTCTTGGCTGCAGTCCTaGCCGCGGAAGCCGGTTCGCGAGCAGTCGCACACG +
Preference number: 6 (lower is better)
Translates to: ARPSTLLSWLQS*PRKPVREQSHT
Trigger: CGTGTGCGACTGCTCGCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAGACAACAATGTGGAAGGTCTGGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS CAA 72 bp ATGTGTAGTTGGCTCACACCAGCTTGGCTGCAGTCCTaGCCGCGGAAGCCGGTTCGCGAGCAGTCGCACACG +
Preference number: 6 (lower is better)
Translates to: MCSWLTPAWLQS*PRKPVREQSHT
Trigger: CGTGTGCGACTGCTCGCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAGCTGGTGTGAGCCAACTACACAT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637679.1
CDS CAA 90 bp CCGACGAAAAGGCCGCTGAACACCGTCATGTCCCTGCGCTTGGACTaGACCTCCACCCACTTGGCCTCCACCTGGTCGATGAAGAGCGTG +
Preference number: 6 (lower is better)
Translates to: PTKRPLNTVMSLRLD*TSTHLASTWSMKSV
Trigger: CACGCTCTTCATCGACCAGGTGGAGGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGGACATGACGGTGTTCAGCGGCCTTTTCGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000625672.2
ENST00000626899.1
ENST00000628515.2
ENST00000630543.2
ENST00000637511.1
ENST00000675235.1
CDS GCA 72 bp GACCTTCCACATTGTTGTCTTCTTGGCTGCAGTCCTTaGCGCGGAAGCCGGTTCGCGAGCAGTCGCACACGG +
Preference number: 6 (lower is better)
Translates to: DLPHCCLLGCSP*RGSRFASSRTR
Trigger: CCGTGTGCGACTGCTCGCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAGAAGACAACAATGTGGAAGGTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000401669.7
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000625672.2
ENST00000630543.2
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS GCA 72 bp GGTGCGCCAGACCTTCCACATTGTTGTCTTCTTGGCTaGAGTCCTTGCCGCGGAAGCCGGTTCGCGAGCAGT +
Preference number: 6 (lower is better)
Translates to: GAPDLPHCCLLG*SPCRGSRFASS
Trigger: ACTGCTCGCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAGAAGACAACAATGTGGAAGGTCTGGCGCACC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000401669.7
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000625672.2
ENST00000630543.2
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS GCA 72 bp GACCAGCCTCTGGAGGCTGGAAGTCTGAGATGGGTGTaGCAGCCTGGTCAGGTTCTGGTGAGGACCCTCTTC +
Preference number: 6 (lower is better)
Translates to: DQPLEAGSLRWV*QPGQVLVRTLF
Trigger: GAAGAGGGTCCTCACCAGAACCTGACCAGGCTGGCACACCCATCTCAGACTTCCAGCCTCCAGAGGCTGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000447773.2
ENST00000636104.1
ENST00000637975.1
CDS GCA 72 bp TCAGGTGCGCCAGACCTTCCACATTGTTGTCTTGGCTaGAGTCCTTGCCGCGGAAGCCGGTTCGCGAGCAGT +
Preference number: 6 (lower is better)
Translates to: SGAPDLPHCCLG*SPCRGSRFASS
Trigger: ACTGCTCGCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAGACAACAATGTGGAAGGTCTGGCGCACCTGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS CCA 72 bp CCCAAAGAGTTTCGGGCGAGAGTGCGTGCCGGCGGGTaGGGGGCCGAGAAATTGTTTAAAGCTCCTCCTGGA +
Preference number: 6 (lower is better)
Translates to: PKEFRARVRAGG*GAEKLFKAPPG
Trigger: TCCAGGAGGAGCTTTAAACAATTTCTCGGCCCCCCACCCGCCGGCACGCACTCTCGCCCGAAACTCTTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000628364.2
CDS CAA 90 bp CTGAACACCGTCATGTCCCTGCGCTTGGACTTGACCTCCACCCACTaGGCCTCCACCTGGTCGATGAAGAGCGTGGTGTTGCGGAACTGG +
Preference number: 6 (lower is better)
Translates to: LNTVMSLRLDLTSTH*ASTWSMKSVVLRNW
Trigger: CCAGTTCCGCAACACCACGCTCTTCATCGACCAGGTGGAGGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGGACATGACGGTGTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000625672.2
ENST00000626899.1
ENST00000628515.2
ENST00000630543.2
ENST00000637511.1
ENST00000675235.1
CDS GCA 72 bp AGCACCCCAAACAATCCGAAACATAGCCGAGGCGAATaGAGCTGGAGAGGGGCTTGTCCGGAAAGGCAGCCC +
Preference number: 6 (lower is better)
Translates to: STPNNPKHSRGE*SWRGACPERQP
Trigger: GGGCTGCCTTTCCGGACAAGCCCCTCTCCAGCTGCATTCGCCTCGGCTATGTTTCGGATTGTTTGGGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000611589.4
ENST00000628364.2
CDS GCA 72 bp CTTCGGACAGTCTTCTCGGGGTCCTGGAGTCCGCCGTaGCTAGCACCCCAAACAATCCGAAACATAGCCGAG +
Preference number: 6 (lower is better)
Translates to: LRTVFSGSWSPP*LAPQTIRNIAE
Trigger: CTCGGCTATGTTTCGGATTGTTTGGGGTGCTAGGCACGGCGGACTCCAGGACCCCGAGAAGACTGTCCGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000611589.4
ENST00000628364.2
CDS CCA 72 bp CCAAACAATCCGAAACATAGCCGAGGCGAATGCAGCTaGAGAGGGGCTTGTCCGGAAAGGCAGCCCCGGGAA +
Preference number: 6 (lower is better)
Translates to: PNNPKHSRGECS*RGACPERQPRE
Trigger: TTCCCGGGGCTGCCTTTCCGGACAAGCCCCTCTCCAGCTGCATTCGCCTCGGCTATGTTTCGGATTGTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000611589.4
ENST00000628364.2
CDS CAA 72 bp GTCATGTCCCTGCGCTTGGACTTGACCTCCACCCACTaGGCCTCCACCTGGTCGATGAAGAGCGTGGTGTTG +
Preference number: 6 (lower is better)
Translates to: VMSLRLDLTSTH*ASTWSMKSVVL
Trigger: CAACACCACGCTCTTCATCGACCAGGTGGAGGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGGACATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000625672.2
ENST00000626899.1
ENST00000628515.2
ENST00000630543.2
ENST00000637511.1
ENST00000675235.1
CDS CAA 72 bp AGACCTTCCACATTGTTGTCTTCTTGGCTGCAGTCCTaGCCGCGGAAGCCGGTTCGCGAGCAGTCGCACACG +
Preference number: 6 (lower is better)
Translates to: RPSTLLSSWLQS*PRKPVREQSHT
Trigger: CGTGTGCGACTGCTCGCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAGAAGACAACAATGTGGAAGGTCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000401669.7
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000625672.2
ENST00000630543.2
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS CAA 72 bp CATCAGGTGCGCCAGACCTTCCACATTGTTGTCTTCTaGGCTGCAGTCCTTGCCGCGGAAGCCGGTTCGCGA +
Preference number: 6 (lower is better)
Translates to: HQVRQTFHIVVF*AAVLAAEAGSR
Trigger: TCGCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAGAAGACAACAATGTGGAAGGTCTGGCGCACCTGATG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000401669.7
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000625672.2
ENST00000630543.2
ENST00000636066.1
ENST00000637511.1
ENST00000675235.1
CDS CAA 72 bp CATCATCAGGTGCGCCAGACCTTCCACATTGTTGTCTaGGCTGCAGTCCTTGCCGCGGAAGCCGGTTCGCGA +
Preference number: 6 (lower is better)
Translates to: HHQVRQTFHIVV*AAVLAAEAGSR
Trigger: TCGCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAGACAACAATGTGGAAGGTCTGGCGCACCTGATGATG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626899.1
CDS GCA 72 bp GGTCATACTCTGGAGGCTGGAAGTCTGAGATGGGTGTaGCAGCCTGGTCAGGTTCTGGTGAGGACCCTCTTC +
Preference number: 6 (lower is better)
Translates to: GHTLEAGSLRWV*QPGQVLVRTLF
Trigger: GAAGAGGGTCCTCACCAGAACCTGACCAGGCTGGCACACCCATCTCAGACTTCCAGCCTCCAGAGTATGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637368.1
CDS TCA 72 bp CCGGGGCCGACAGGGTCAAAATGGTCCTGGACACCGTaGCGAAGAAATAAGGGTCCCGAGAGACAGAAAGGT +
Preference number: 6 (lower is better)
Translates to: PGPTGSKWSWTP*RRNKGPERQKG
Trigger: ACCTTTCTGTCTCTCGGGACCCTTATTTCTTCGTCACGGTGTCCAGGACCATTTTGACCCTGTCGGCCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000625672.2
ENST00000626899.1
ENST00000628515.2
ENST00000637511.1
CDS GCA 72 bp ACTGAAGACCGAATTTTATTTCTTGGCTGCAGTCCTTaGCGCGGAAGCCGGTTCGCGAGCAGTCGCACACGG +
Preference number: 6 (lower is better)
Translates to: TEDRILFLGCSP*RGSRFASSRTR
Trigger: CCGTGTGCGACTGCTCGCGAACCGGCTTCCGCGGCAAGGACTGCAGCCAAGAAATAAAATTCGGTCTTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404971.5
ENST00000627198.2
CDS CCA 72 bp GAGGAATGCAGGGGCAAGCAAGACTCACACAGGCACTaGCATTCTTCTAGATCCGATGTCCCTTGCCCCACC +
Preference number: 6 (lower is better)
Translates to: EECRGKQDSHRH*HSSRSDVPCPT
Trigger: GGTGGGGCAAGGGACATCGGATCTAGAAGAATGCCAGTGCCTGTGTGAGTCTTGCTTGCCCCTGCATTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635126.1
CDS CAA 90 bp GTGACAGGAGAGCTCCCTGACTCAGTGGGAGATCAAGATGATAAATaGCCTGCGCATCAGCCCGGCCTATCAGTGCCCTGCACACAGATG +
Preference number: 6 (lower is better)
Translates to: VTGELPDSVGDQDDK*PAHQPGLSVPCTQM
Trigger: CATCTGTGTGCAGGGCACTGATAGGCCGGGCTGATGCGCAGGCAATTTATCATCTTGATCTCCCACTGAGTCAGGGAGCTCTCCTGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378262.7
ENST00000412315.5
CDS GCA 72 bp TTGAAAACTCTGGAGGCTGGAAGTCTGAGATGGGTGTaGCAGCCTGGTCAGGTTCTGGTGAGGACCCTCTTC +
Preference number: 6 (lower is better)
Translates to: LKTLEAGSLRWV*QPGQVLVRTLF
Trigger: GAAGAGGGTCCTCACCAGAACCTGACCAGGCTGGCACACCCATCTCAGACTTCCAGCCTCCAGAGTTTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416262.6
CDS GCA 72 bp CACAGGCACTGGCATTCTTCTAGATCCGATGTCCCTTaGCCCACCCCTTACTGTGGCTCTGCCTTGGGTAAT +
Preference number: 6 (lower is better)
Translates to: HRHWHSSRSDVP*PTPYCGSALGN
Trigger: ATTACCCAAGGCAGAGCCACAGTAAGGGGTGGGGCAAGGGACATCGGATCTAGAAGAATGCCAGTGCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635126.1
CDS TCA 72 bp TCTCACCAGGAGCAGTGTAGGGAGTACGCAACGTGTTaGCAGAAATGGTACCTGACCGTCCGTCTCTCTGGA +
Preference number: 6 (lower is better)
Translates to: SHQEQCREYATC*QKWYLTVRLSG
Trigger: TCCAGAGAGACGGACGGTCAGGTACCATTTCTGTCAACACGTTGCGTACTCCCTACACTGCTCCTGGTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331040.9
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
ENST00000630543.2
ENST00000636298.1
CDS GCA 72 bp CCGTTTGACTCTGGAACATCGGGTCTTCAGCAAAGGTaGTTTCATGCTGGATTGGTGACCCTGGAAGGTCGG +
Preference number: 6 (lower is better)
Translates to: PFDSGTSGLQQR*FHAGLVTLEGR
Trigger: CCGACCTTCCAGGGTCACCAATCCAGCATGAAAGCACCTTTGCTGAAGACCCGATGTTCCAGAGTCAAACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000625891.2
ENST00000628761.1
CDS TCA 72 bp CTGAAGGAAGTGGGAATCGAACGGCGGAAAGGCAGCTaGGAAGAAGATGCAGACGAAGGAGTAAGGGAGAGA +
Preference number: 6 (lower is better)
Translates to: LKEVGIERRKGS*EEDADEGVRER
Trigger: TCTCTCCCTTACTCCTTCGTCTGCATCTTCTTCTCAGCTGCCTTTCCGCCGTTCGATTCCCACTTCCTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000628364.2
CDS TCA 72 bp CTCTCTCCCTGTAGTCCTCTTCCAACTGGAAAACGTTaGCCCCAGTGGTACAGGGTAGCCACAGAACTTCCA +
Preference number: 6 (lower is better)
Translates to: LSPCSPLPTGKR*PQWYRVATELP
Trigger: TGGAAGTTCTGTGGCTACCCTGTACCACTGGGGTCAACGTTTTCCAGTTGGAAGAGGACTACAGGGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000626899.1
ENST00000628515.2
ENST00000635310.1
ENST00000637511.1
CDS GCA 72 bp ATGATAAATTGCCTGCGCATCAGCCCGGCCTATCAGTaGCCTGCACACAGATGGGCGAGAAAAGACACAGAA +
Preference number: 6 (lower is better)
Translates to: MINCLRISPAYQ*PAHRWARKDTE
Trigger: TTCTGTGTCTTTTCTCGCCCATCTGTGTGCAGGGCACTGATAGGCCGGGCTGATGCGCAGGCAATTTATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378262.7
CDS GCA 72 bp GGTTATTCCCCTCAGCTCGAGCCAGAGCCTGAAGCATaGATCGGTCAAAGCGAATTTCCTGAGGTCTATGGA +
Preference number: 6 (lower is better)
Translates to: GYSPQLEPEPEA*IGQSEFPEVYG
Trigger: TCCATAGACCTCAGGAAATTCGCTTTGACCGATGCATGCTTCAGGCTCTGGCTCGAGCTGAGGGGAATAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000626899.1
ENST00000628515.2
ENST00000637511.1
CDS CCA 72 bp CTAGAAGTGGTTGCCATCAGAATGCCATATGCACGCTaGGATCGGAACCGTAAGGAAACATCCTCAGCCTCC +
Preference number: 6 (lower is better)
Translates to: LEVVAIRMPYAR*DRNRKETSSAS
Trigger: GGAGGCTGAGGATGTTTCCTTACGGTTCCGATCCCAGCGTGCATATGGCATTCTGATGGCAACCACTTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331040.9
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
ENST00000630543.2
ENST00000636298.1
CDS CAA 90 bp GGTCGGTCATTAGGAGGCCACTTATACGTGATTTGTCCACCACCTTaGCTAAAGATATATGTCGTCCCAGCGTGTCCGCCTCGCAAGGAT +
Preference number: 6 (lower is better)
Translates to: GRSLGGHLYVICPPP*LKIYVVPACPPRKD
Trigger: ATCCTTGCGAGGCGGACACGCTGGGACGACATATATCTTTAGCAAAGGTGGTGGACAAATCACGTATAAGTGGCCTCCTAATGACCGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000611589.4
ENST00000628364.2
ENST00000637906.1
CDS TCA 72 bp TCTCACCAGGAGCAGTGTAGGGAGTACGCAACGTGTTaGCAGAAATGGTACTGTGGTTGCATATCCCAGTCC +
Preference number: 6 (lower is better)
Translates to: SHQEQCREYATC*QKWYCGCISQS
Trigger: GGACTGGGATATGCAACCACAGTACCATTTCTGTCAACACGTTGCGTACTCCCTACACTGCTCCTGGTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637207.1
CDS GCA 72 bp GCACCATTTCTTAACCCGAGGATAGCTTCAAAGGCCTaGTTCTTCTGTCATAGCATGGGCTTCAGCACCGCT +
Preference number: 6 (lower is better)
Translates to: APFLNPRIASKA*FFCHSMGFSTA
Trigger: AGCGGTGCTGAAGCCCATGCTATGACAGAAGAAGCAGGCCTTTGAAGCTATCCTCGGGTTAAGAAATGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000626899.1
ENST00000628515.2
ENST00000635310.1
ENST00000637511.1
CDS GCA 72 bp GGGCTGGCCCTGCTCTTTCCCGCCAATTATTATGGTTaGTTGGCTATTGAAGATTGTGAGCTGACGCCCTTT +
Preference number: 6 (lower is better)
Translates to: GLALLFPANYYG*LAIEDCELTPF
Trigger: AAAGGGCGTCAGCTCACAATCTTCAATAGCCAAGCAACCATAATAATTGGCGGGAAAGAGCAGGGCCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000625672.2
ENST00000628364.2
ENST00000630543.2
ENST00000635264.1
ENST00000637889.1
CDS GCA 72 bp TTTCATGCTGGATTGGTGACCCTGGAAGGTCGGCTGTaGTGGGACTGCCTCCAACATAGAAAAAGTCATCAG +
Preference number: 6 (lower is better)
Translates to: FHAGLVTLEGRL*WDCLQHRKSHQ
Trigger: CTGATGACTTTTTCTATGTTGGAGGCAGTCCCAGCACAGCCGACCTTCCAGGGTCACCAATCCAGCATGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000625891.2
ENST00000628761.1
CDS GCA 72 bp GATGAGCTCTGGCTTTACTTGTGCACCTTGGTCTCCTaGTCGGAACCCTTGAAAAGAAGCTGCAGCTTTTCG +
Preference number: 6 (lower is better)
Translates to: DELWLYLCTLVS*SEPLKRSCSFS
Trigger: CGAAAAGCTGCAGCTTCTTTTCAAGGGTTCCGAGCAGGAGACCAAGGTGCACAAGTAAAGCCAGAGCTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635126.1
CDS CAA 72 bp CTTTACTTGTGCACCTTGGTCTCCTGCTCGGAACCCTaGAAAAGAAGCTGCAGCTTTTCGAGGAATGCAGGG +
Preference number: 6 (lower is better)
Translates to: LYLCTLVSCSEP*KRSCSFSRNAG
Trigger: CCCTGCATTCCTCGAAAAGCTGCAGCTTCTTTTCAAGGGTTCCGAGCAGGAGACCAAGGTGCACAAGTAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635126.1
CDS CAA 90 bp TGCTCGTGTACTGGGTCGGTCATTAGGAGGCCACTTATACGTGATTaGTCCACCACCTTTGCTAAAGATATATGTCGTCCCAGCGTGTCC +
Preference number: 6 (lower is better)
Translates to: CSCTGSVIRRPLIRD*STTFAKDICRPSVS
Trigger: GGACACGCTGGGACGACATATATCTTTAGCAAAGGTGGTGGACAAATCACGTATAAGTGGCCTCCTAATGACCGACCCAGTACACGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000611589.4
ENST00000628364.2
ENST00000637906.1
CDS GCA 72 bp TTTCTGAACAGTGCTAAAACCTATGGCCAGTCTGTCTaGTCGTGTACTGGGTCGGTCATTAGGAGGCCACTT +
Preference number: 6 (lower is better)
Translates to: FLNSAKTYGQSV*SCTGSVIRRPL
Trigger: AAGTGGCCTCCTAATGACCGACCCAGTACACGAGCAGACAGACTGGCCATAGGTTTTAGCACTGTTCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000331040.9
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000611589.4
ENST00000625320.2
ENST00000625672.2
ENST00000628364.2
ENST00000630543.2
ENST00000635264.1
ENST00000636298.1
ENST00000637889.1
ENST00000637906.1
CDS GCA 72 bp CATAGCTCAAAACCGTTGCCTCTCTCTCACAGGACCTaGCAAGATAGCCTGTTCCGGAACAATCACAGACAT +
Preference number: 6 (lower is better)
Translates to: HSSKPLPLSHRT*QDSLFRNNHRH
Trigger: ATGTCTGTGATTGTTCCGGAACAGGCTATCTTGGCAGGTCCTGTGAGAGAGAGGCAACGGTTTTGAGCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331040.9
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
ENST00000630543.2
ENST00000636298.1
CDS CCA 72 bp ACTCTTAACTTCAGCCAGTCCTCTTTACTTTTACCTTaGTCGCCCATCATCAGGTGCGCCAGACCTTCCACA +
Preference number: 6 (lower is better)
Translates to: TLNFSQSSLLLP*SPIIRCARPST
Trigger: TGTGGAAGGTCTGGCGCACCTGATGATGGGCGACCAAGGTAAAAGTAAAGAGGACTGGCTGAAGTTAAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630431.1
CDS CAA 72 bp CACCCATCCCTGCACATGCCATTGTTTTTGCAAGGGTaGCTAAGGCACGGTTTTGCTGTTTCCTTTGAGCAG +
Preference number: 6 (lower is better)
Translates to: HPSLHMPLFLQG*LRHGFAVSFEQ
Trigger: CTGCTCAAAGGAAACAGCAAAACCGTGCCTTAGCAACCCTTGCAAAAACAATGGCATGTGCAGGGATGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331040.9
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
ENST00000630543.2
ENST00000636298.1
CDS CAA 72 bp TGGGCTTCAGCACCGCTGCAGCCAAAGCCTAATTCCTaGTGCGTGGTCTCACAAGTTGGATTTTACTTCTCT +
Preference number: 6 (lower is better)
Translates to: WASAPLQPKPNS*CVVSQVGFYFS
Trigger: AGAGAAGTAAAATCCAACTTGTGAGACCACGCACAAGGAATTAGGCTTTGGCTGCAGCGGTGCTGAAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000626899.1
ENST00000628515.2
ENST00000635310.1
ENST00000637511.1
CDS CAA 72 bp GGACCCTCTTCCAGGTTGCAGACTGCTGACTTTTCATaGTTGTTGGTGGGCTGGTTCAGGTTCTTGACTTTC +
Preference number: 6 (lower is better)
Translates to: GPSSRLQTADFS*LLVGWFRFLTF
Trigger: GAAAGTCAAGAACCTGAACCAGCCCACCAACAACAATGAAAAGTCAGCAGTCTGCAACCTGGAAGAGGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000447773.2
ENST00000635126.1
ENST00000636104.1
ENST00000637368.1
ENST00000637975.1
CDS CAA 90 bp GGTCGGTCATTAGGAGGCCACTTATACGTGATTTGTCCACCACCTTaGCTAAAGATATATGTCGTCCCAGGGTCATTGCAGAGTGGTCCA +
Preference number: 6 (lower is better)
Translates to: GRSLGGHLYVICPPP*LKIYVVPGSLQSGP
Trigger: TGGACCACTCTGCAATGACCCTGGGACGACATATATCTTTAGCAAAGGTGGTGGACAAATCACGTATAAGTGGCCTCCTAATGACCGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331040.9
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625320.2
ENST00000625672.2
ENST00000630543.2
ENST00000636298.1
ENST00000637889.1
CDS CAA 90 bp CACCGCTGCAGCCAAAGCCTAATTCCTTGTGCGTGGTCTCACAAGTaGGATTTTACTTCTCTTTTCAGCCACGGCAACAGTAGGACTCAA +
Preference number: 6 (lower is better)
Translates to: HRCSQSLIPCAWSHK*DFTSLFSHGNSRTQ
Trigger: TTGAGTCCTACTGTTGCCGTGGCTGAAAAGAGAAGTAAAATCCAACTTGTGAGACCACGCACAAGGAATTAGGCTTTGGCTGCAGCGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000626899.1
ENST00000628515.2
ENST00000635310.1
ENST00000637511.1
CDS CAA 90 bp GTCATAGCATGGGCTTCAGCACCGCTGCAGCCAAAGCCTAATTCCTaGTGCGTGGTCTCACAAGTTGGATTTTACTTCTCTTTTCAGCCA +
Preference number: 6 (lower is better)
Translates to: VIAWASAPLQPKPNS*CVVSQVGFYFSFQP
Trigger: TGGCTGAAAAGAGAAGTAAAATCCAACTTGTGAGACCACGCACAAGGAATTAGGCTTTGGCTGCAGCGGTGCTGAAGCCCATGCTATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000626899.1
ENST00000628515.2
ENST00000635310.1
ENST00000637511.1
CDS TCA 72 bp GAAGAACTGTCCACTCGCACCAATACGGCTTCTTTCTaGACAGTGCTAAAACCTATGGCCAGTCTGTCTGCT +
Preference number: 6 (lower is better)
Translates to: EELSTRTNTASF*TVLKPMASLSA
Trigger: AGCAGACAGACTGGCCATAGGTTTTAGCACTGTTCAGAAAGAAGCCGTATTGGTGCGAGTGGACAGTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000331040.9
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000611589.4
ENST00000625672.2
ENST00000628364.2
ENST00000630543.2
ENST00000635264.1
ENST00000636298.1
ENST00000637889.1
ENST00000637906.1
CDS GCA 72 bp GCCACCACTCCATGGATCTTCATCTTAGGATCTCCTTaGTTGGCAAGTCGAGATAATTCCAGCCTCACATCA +
Preference number: 6 (lower is better)
Translates to: ATTPWIFILGSP*LASRDNSSLTS
Trigger: TGATGTGAGGCTGGAATTATCTCGACTTGCCAAGCAAGGAGATCCTAAGATGAAGATCCATGGAGTGGTGGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331040.9
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000495871.2
ENST00000625672.2
ENST00000630543.2
ENST00000636298.1
CDS GCA 72 bp TTTCCTTTACTTTTACCTTGGTCGCCCATCATCAGGTaGGCCAGACCTTCCACATTGTTGTCTTCTTGGCTG +
Preference number: 6 (lower is better)
Translates to: FPLLLPWSPIIR*ARPSTLLSSWL
Trigger: CAGCCAAGAAGACAACAATGTGGAAGGTCTGGCGCACCTGATGATGGGCGACCAAGGTAAAAGTAAAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401669.7
ENST00000406316.6
ENST00000625672.2
ENST00000630543.2
CDS GCA 72 bp AACTCTTTACTTTTACCTTGGTCGCCCATCATCAGGTaGGCCAGACCTTCCACATTGTTGTCTTCTTGGCTG +
Preference number: 6 (lower is better)
Translates to: NSLLLPWSPIIR*ARPSTLLSSWL
Trigger: CAGCCAAGAAGACAACAATGTGGAAGGTCTGGCGCACCTGATGATGGGCGACCAAGGTAAAAGTAAAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636066.1
CDS GCA 72 bp ATACCTTTACTTTTACCTTGGTCGCCCATCATCAGGTaGGCCAGACCTTCCACATTGTTGTCTTCTTGGCTG +
Preference number: 6 (lower is better)
Translates to: IPLLLPWSPIIR*ARPSTLLSSWL
Trigger: CAGCCAAGAAGACAACAATGTGGAAGGTCTGGCGCACCTGATGATGGGCGACCAAGGTAAAAGTAAAGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675235.1
CDS CCA 72 bp CAGCACCGCTGCAGCCAAAGCCTAATTCCTTGTGCGTaGTCTCACAAGTTGGATTTTACTTCTCTTTTCAGC +
Preference number: 6 (lower is better)
Translates to: QHRCSQSLIPCA*SHKLDFTSLFS
Trigger: GCTGAAAAGAGAAGTAAAATCCAACTTGTGAGACCACGCACAAGGAATTAGGCTTTGGCTGCAGCGGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000626899.1
ENST00000628515.2
ENST00000635310.1
ENST00000637511.1
CDS CAA 72 bp TTAGGAGGCCACTTATACGTGATTTGTCCACCACCTTaGCTAAAGATATATGTCGTCCCAGCGTGTCCGCCT +
Preference number: 6 (lower is better)
Translates to: LGGHLYVICPPP*LKIYVVPACPP
Trigger: AGGCGGACACGCTGGGACGACATATATCTTTAGCAAAGGTGGTGGACAAATCACGTATAAGTGGCCTCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342183.9
ENST00000401710.5
ENST00000611589.4
ENST00000628364.2
ENST00000637906.1
CDS CAA 72 bp CAGACATATCTGTTCCACCCATCCCTGCACATGCCATaGTTTTTGCAAGGGTTGCTAAGGCACGGTTTTGCT +
Preference number: 6 (lower is better)
Translates to: QTYLFHPSLHMP*FLQGLLRHGFA
Trigger: AGCAAAACCGTGCCTTAGCAACCCTTGCAAAAACAATGGCATGTGCAGGGATGGGTGGAACAGATATGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331040.9
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
ENST00000630543.2
ENST00000636298.1
CDS CAA 72 bp AAGAAAGTACAGGAAGCCAGCAGTGAGCCAGTATCCTaGGATGCTTGTGAATGCCTCAAGTCTGTCTCCTTC +
Preference number: 6 (lower is better)
Translates to: KKVQEASSEPVS*DACECLKSVSF
Trigger: GAAGGAGACAGACTTGAGGCATTCACAAGCATCCAAGGATACTGGCTCACTGCTGGCTTCCTGTACTTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000626899.1
ENST00000628515.2
ENST00000635310.1
ENST00000637511.1
CDS CAA 72 bp TCTGTCAGCCAAAGCAAATCGCAGACCAGCCTAAATTaGAAAACTCTGGAGGCTGGAAGTCTGAGATGGGTG +
Preference number: 6 (lower is better)
Translates to: SVSQSKSQTSLN*KTLEAGSLRWV
Trigger: CACCCATCTCAGACTTCCAGCCTCCAGAGTTTTCAAATTTAGGCTGGTCTGCGATTTGCTTTGGCTGACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416262.6
CDS CAA 72 bp AGCCTCAGATGCATTGAGAGCCAGTGTACTTTGTCTTaGCTCTTGTTCCTGCCTTGTCTAGCATCTGGATGC +
Preference number: 6 (lower is better)
Translates to: SLRCIESQCTLS*LLFLPCLASGC
Trigger: GCATCCAGATGCTAGACAAGGCAGGAACAAGAGCAAAGACAAAGTACACTGGCTCTCAATGCATCTGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS CAA 90 bp TGCTCGTGTACTGGGTCGGTCATTAGGAGGCCACTTATACGTGATTaGTCCACCACCTTTGCTAAAGATATATGTCGTCCCAGGGTCATT +
Preference number: 6 (lower is better)
Translates to: CSCTGSVIRRPLIRD*STTFAKDICRPRVI
Trigger: AATGACCCTGGGACGACATATATCTTTAGCAAAGGTGGTGGACAAATCACGTATAAGTGGCCTCCTAATGACCGACCCAGTACACGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331040.9
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625320.2
ENST00000625672.2
ENST00000630543.2
ENST00000636298.1
ENST00000637889.1
CDS CAA 90 bp ACTTCTCTTTTCAGCCACGGCAACAGTAGGACTCAAACCCAGCAGTaGCGAAATAGCCAGAAGCTGTTAGATGTGGAAATCGCAACAGCT +
Preference number: 6 (lower is better)
Translates to: TSLFSHGNSRTQTQQ*RNSQKLLDVEIATA
Trigger: AGCTGTTGCGATTTCCACATCTAACAGCTTCTGGCTATTTCGCAACTGCTGGGTTTGAGTCCTACTGTTGCCGTGGCTGAAAAGAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000626899.1
ENST00000628515.2
ENST00000635310.1
ENST00000637511.1
CDS CAA 90 bp GTACAGGGTAGCCACAGAACTTCCAGACCAAAGGGAGGATGCACTTaGGAGACAACGTTCTGGAAAAGGCTTCAACAAAAGATCAAGGGA +
Preference number: 6 (lower is better)
Translates to: VQGSHRTSRPKGGCT*ETTFWKRLQQKIKG
Trigger: TCCCTTGATCTTTTGTTGAAGCCTTTTCCAGAACGTTGTCTCCAAAGTGCATCCTCCCTTTGGTCTGGAAGTTCTGTGGCTACCCTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000626899.1
ENST00000628515.2
ENST00000635310.1
ENST00000637511.1
CDS CAA 90 bp TCATCATATTCTGTCAGCCAAAGCAAATCGCAGACCAGCCTAAATTaGAAAACTCTGGAGGCTGGAAGTCTGAGATGGGTGTGCCAGCCT +
Preference number: 6 (lower is better)
Translates to: SSYSVSQSKSQTSLN*KTLEAGSLRWVCQP
Trigger: AGGCTGGCACACCCATCTCAGACTTCCAGCCTCCAGAGTTTTCAAATTTAGGCTGGTCTGCGATTTGCTTTGGCTGACAGAATATGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416262.6
CDS CAA 90 bp GCAACGATGAGTATCAGTCCATACTCAGAGAGGTACTTACGGTCATaGCAGAGTGGTCCACTGAAGGAAGTCATACTACAGTCACAGCTG +
Preference number: 6 (lower is better)
Translates to: ATMSISPYSERYLRS*QSGPLKEVILQSQL
Trigger: CAGCTGTGACTGTAGTATGACTTCCTTCAGTGGACCACTCTGCAATGACCGTAAGTACCTCTCTGAGTATGGACTGATACTCATCGTTGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462791.2
CDS CAA 90 bp ACTTTTCTCAAGAAAGTACAGGAAGCCAGCAGTGAGCCAGTATCCTaGGATGCTTGTGAATGCCTCAAGTCTGTCTCCTTCAGATGTGGT +
Preference number: 6 (lower is better)
Translates to: TFLKKVQEASSEPVS*DACECLKSVSFRCG
Trigger: ACCACATCTGAAGGAGACAGACTTGAGGCATTCACAAGCATCCAAGGATACTGGCTCACTGCTGGCTTCCTGTACTTTCTTGAGAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000626899.1
ENST00000628515.2
ENST00000635310.1
ENST00000637511.1
CDS CAA 90 bp TGCTCGTGTACTGGGTCGGTCATTAGGAGGCCACTTATACGTGATTaGTCCACCACCTTTGCTAAAGATATATGTCGTCCCAGCTTGAAT +
Preference number: 6 (lower is better)
Translates to: CSCTGSVIRRPLIRD*STTFAKDICRPSLN
Trigger: ATTCAAGCTGGGACGACATATATCTTTAGCAAAGGTGGTGGACAAATCACGTATAAGTGGCCTCCTAATGACCGACCCAGTACACGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635264.1
CDS GCA 72 bp CTCTTGAGGTCTAAGTTCCTGGCTCCGGCGGTGATTTaGGTTGTGATTTTTGTGTCAATCTTTACAGTGTGG +
Preference number: 6 (lower is better)
Translates to: LLRSKFLAPAVI*VVIFVSIFTVW
Trigger: CCACACTGTAAAGATTGACACAAAAATCACAACGCAAATCACCGCCGGAGCCAGGAACTTAGACCTCAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000331040.9
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000462791.2
ENST00000625320.2
ENST00000625672.2
ENST00000630543.2
ENST00000636298.1
ENST00000637889.1
CDS GCA 72 bp GCTTCAGCACCGCTGCAGCCAAAGCCTAATTCCTTGTaGGTGGTCTCACAAGTTGGATTTTACTTCTCTTTT +
Preference number: 6 (lower is better)
Translates to: ASAPLQPKPNSL*VVSQVGFYFSF
Trigger: AAAAGAGAAGTAAAATCCAACTTGTGAGACCACGCACAAGGAATTAGGCTTTGGCTGCAGCGGTGCTGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000626899.1
ENST00000628515.2
ENST00000635310.1
ENST00000637511.1
CDS GCA 72 bp ATATATTCTTCTTTTCCTTGGTCGCCCATCATCAGGTaGGCCAGACCTTCCACATTGTTGTCTTCTTGGCTG +
Preference number: 6 (lower is better)
Translates to: IYSSFPWSPIIR*ARPSTLLSSWL
Trigger: CAGCCAAGAAGACAACAATGTGGAAGGTCTGGCGCACCTGATGATGGGCGACCAAGGAAAAGAAGAATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405472.7
CDS GCA 72 bp TCTTTGCTCTTGTTCCTGCCTTGTCTAGCATCTGGATaGAGAAGATCTGGATGCAGTGAAAGACTCAAAGGC +
Preference number: 6 (lower is better)
Translates to: SLLLFLPCLASG*RRSGCSERLKG
Trigger: GCCTTTGAGTCTTTCACTGCATCCAGATCTTCTGCATCCAGATGCTAGACAAGGCAGGAACAAGAGCAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS GCA 72 bp ATTTCTTTACTTTTACCTTGGTCGCCCATCATCAGGTaGGCCAGACCTTCCACATTGTTGTCTTCTTGGCTG +
Preference number: 6 (lower is better)
Translates to: ISLLLPWSPIIR*ARPSTLLSSWL
Trigger: CAGCCAAGAAGACAACAATGTGGAAGGTCTGGCGCACCTGATGATGGGCGACCAAGGTAAAAGTAAAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637511.1
CDS CCA 72 bp GCTAAAGATATATGTCGTCCCAGGGTCATTGCAGAGTaGTCCACTGAAGGAAGTCATACTACAGTCACAGCT +
Preference number: 6 (lower is better)
Translates to: AKDICRPRVIAE*STEGSHTTVTA
Trigger: AGCTGTGACTGTAGTATGACTTCCTTCAGTGGACCACTCTGCAATGACCCTGGGACGACATATATCTTTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331040.9
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625320.2
ENST00000625672.2
ENST00000630543.2
ENST00000636298.1
ENST00000637889.1
CDS CCA 72 bp TCCATACTCAGAGAGGTACTTACGGTCATTGCAGAGTaGTCCACTGAAGGAAGTCATACTACAGTCACAGCT +
Preference number: 6 (lower is better)
Translates to: SILREVLTVIAE*STEGSHTTVTA
Trigger: AGCTGTGACTGTAGTATGACTTCCTTCAGTGGACCACTCTGCAATGACCGTAAGTACCTCTCTGAGTATGGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462791.2
ENST00000626192.1
CDS CCA 72 bp ATGATCCAATGCCCTTTCCACTTCACTCCTTCACAATaGCCGAAGAACCAAATTCAAGGCAAGGCCATCCAA +
Preference number: 6 (lower is better)
Translates to: MIQCPFHFTPSQ*PKNQIQGKAIQ
Trigger: TTGGATGGCCTTGCCTTGAATTTGGTTCTTCGGCCATTGTGAAGGAGTGAAGTGGAAAGGGCATTGGATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636298.1
CDS CAA 72 bp ACTGGGTCGGTCATTAGGAGGCCACTTATACGTGATTaGTCCACCACCTTTGCTAAAGATATATGTCGTCCC +
Preference number: 6 (lower is better)
Translates to: TGSVIRRPLIRD*STTFAKDICRP
Trigger: GGGACGACATATATCTTTAGCAAAGGTGGTGGACAAATCACGTATAAGTGGCCTCCTAATGACCGACCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000331040.9
ENST00000342183.9
ENST00000401669.7
ENST00000401710.5
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000611589.4
ENST00000625320.2
ENST00000625672.2
ENST00000628364.2
ENST00000630543.2
ENST00000635264.1
ENST00000636298.1
ENST00000637889.1
ENST00000637906.1
CDS CAA 72 bp CCATTAAATGTCAAGCTCTGCAGGTGTCCAATGAAGTaGGAGGGGACAGAAGAAAGATACCGTCGTTCTGTG +
Preference number: 6 (lower is better)
Translates to: PLNVKLCRCPMK*EGTEERYRRSV
Trigger: CACAGAACGACGGTATCTTTCTTCTGTCCCCTCCAACTTCATTGGACACCTGCAGAGCTTGACATTTAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331040.9
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000462791.2
ENST00000474354.1
ENST00000625672.2
ENST00000630543.2
ENST00000636298.1
CDS CAA 72 bp AGCCACAGAACTTCCAGACCAAAGGGAGGATGCACTTaGGAGACAACGTTCTGGAAAAGGCTTCAACAAAAG +
Preference number: 6 (lower is better)
Translates to: SHRTSRPKGGCT*ETTFWKRLQQK
Trigger: CTTTTGTTGAAGCCTTTTCCAGAACGTTGTCTCCAAAGTGCATCCTCCCTTTGGTCTGGAAGTTCTGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000626899.1
ENST00000628515.2
ENST00000635310.1
ENST00000637511.1
CDS CAA 90 bp GAACAATCACAGACATATCTGTTCCACCCATCCCTGCACATGCCATaGTTTTTGCAAGGGTTGCTAAGGCACGGTTTTGCTGTTTCCTTT +
Preference number: 6 (lower is better)
Translates to: EQSQTYLFHPSLHMP*FLQGLLRHGFAVSF
Trigger: AAAGGAAACAGCAAAACCGTGCCTTAGCAACCCTTGCAAAAACAATGGCATGTGCAGGGATGGGTGGAACAGATATGTCTGTGATTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331040.9
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
ENST00000630543.2
ENST00000636298.1
CDS CAA 90 bp TATGCCATTCCATTAAATGTCAAGCTCTGCAGGTGTCCAATGAAGTaGGAGGGGACAGAAGAAAGATACCGTCGTTCTGTGATGATGCCA +
Preference number: 6 (lower is better)
Translates to: YAIPLNVKLCRCPMK*EGTEERYRRSVMMP
Trigger: TGGCATCATCACAGAACGACGGTATCTTTCTTCTGTCCCCTCCAACTTCATTGGACACCTGCAGAGCTTGACATTTAATGGAATGGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331040.9
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000462791.2
ENST00000474354.1
ENST00000625672.2
ENST00000630543.2
ENST00000636298.1
CDS TCA 72 bp CCTGTGGTTCAAATCCTGGGGTTCCATGATGTGAATTaGTCTTACTTATCTGGGCCAAGTGTCTCCTACTGT +
Preference number: 6 (lower is better)
Translates to: PVVQILGFHDVN*SYLSGPSVSYC
Trigger: ACAGTAGGAGACACTTGGCCCAGATAAGTAAGATCAATTCACATCATGGAACCCCAGGATTTGAACCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637975.1
CDS GCA 72 bp TGTCAACAGATACTTAACTCCTCAAATCCCATTATCTaGCAGGTTCCACCAGTGGTACCAGGCCAAAAGGAA +
Preference number: 6 (lower is better)
Translates to: CQQILNSSNPII*QVPPVVPGQKE
Trigger: TTCCTTTTGGCCTGGTACCACTGGTGGAACCTGGCAGATAATGGGATTTGAGGAGTTAAGTATCTGTTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000626899.1
ENST00000628515.2
ENST00000635310.1
ENST00000637511.1
CDS CCA 72 bp CATCTCAATAGCAAAGAAGTCCACCTTTATCATCTGTaGGTGCTTGGCATCTTTCTGATGTCTTGGCTTGCC +
Preference number: 6 (lower is better)
Translates to: HLNSKEVHLYHL*VLGIFLMSWLA
Trigger: GGCAAGCCAAGACATCAGAAAGATGCCAAGCACCCACAGATGATAAAGGTGGACTTCTTTGCTATTGAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331040.9
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000495871.2
ENST00000625672.2
ENST00000630543.2
ENST00000636298.1
CDS CCA 72 bp AGACCAAAGGGAGGATGCACTTTGGAGACAACGTTCTaGAAAAGGCTTCAACAAAAGATCAAGGGAAAGCAC +
Preference number: 6 (lower is better)
Translates to: RPKGGCTLETTF*KRLQQKIKGKH
Trigger: GTGCTTTCCCTTGATCTTTTGTTGAAGCCTTTTCCAGAACGTTGTCTCCAAAGTGCATCCTCCCTTTGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000626899.1
ENST00000628515.2
ENST00000635310.1
ENST00000637511.1
CDS CCA 72 bp CTTCTACATTGCGATGCACATATGGTCATTGCAGAGTaGTCCACTGAAGGAAGTCATACTACAGTCACAGCT +
Preference number: 6 (lower is better)
Translates to: LLHCDAHMVIAE*STEGSHTTVTA
Trigger: AGCTGTGACTGTAGTATGACTTCCTTCAGTGGACCACTCTGCAATGACCATATGTGCATCGCAATGTAGAAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637151.1
CDS CAA 72 bp AGGCTTCACTCCAGCAGTACTTTGAACTTCAGCCATTaGCCGGATATCTTTGCTTTGGCCATCGATGAACAA +
Preference number: 6 (lower is better)
Translates to: RLHSSSTLNFSH*PDIFALAIDEQ
Trigger: TTGTTCATCGATGGCCAAAGCAAAGATATCCGGCAAATGGCTGAAGTTCAAAGTACTGCTGGAGTGAAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331040.9
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
ENST00000630543.2
ENST00000636298.1
CDS CAA 72 bp TTAGGAGGCCACTTATACGTGATTTGTCCACCACCTTaGCTAAAGATATATGTCGTCCCAGGGTCATTGCAG +
Preference number: 6 (lower is better)
Translates to: LGGHLYVICPPP*LKIYVVPGSLQ
Trigger: CTGCAATGACCCTGGGACGACATATATCTTTAGCAAAGGTGGTGGACAAATCACGTATAAGTGGCCTCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331040.9
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625320.2
ENST00000625672.2
ENST00000630543.2
ENST00000636298.1
ENST00000637889.1
CDS CAA 72 bp AGTATCAGTCCATACTCAGAGAGGTACTTACGGTCATaGCAGAGTGGTCCACTGAAGGAAGTCATACTACAG +
Preference number: 6 (lower is better)
Translates to: SISPYSERYLRS*QSGPLKEVILQ
Trigger: CTGTAGTATGACTTCCTTCAGTGGACCACTCTGCAATGACCGTAAGTACCTCTCTGAGTATGGACTGATACT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462791.2
ENST00000626192.1
CDS TCA 72 bp AGCCGTCCATTTAAATCAACTGATGCCAGGCAGCCTTaGAAGCCTTCTTTGGCATGTACAAGTTTTGGTAAG +
Preference number: 6 (lower is better)
Translates to: SRPFKSTDARQP*KPSLACTSFGK
Trigger: CTTACCAAAACTTGTACATGCCAAAGAAGGCTTTCAAGGCTGCCTGGCATCAGTTGATTTAAATGGACGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000331040.9
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000462791.2
ENST00000625320.2
ENST00000625672.2
ENST00000626192.1
ENST00000630543.2
ENST00000636298.1
ENST00000637889.1
CDS TCA 72 bp CATATCTTTGATTTATGGAGTTCTGTCAGTCCTCCTTaGTTTTTCAGGGTCCAGTCCCTCTGCATGGTATGG +
Preference number: 6 (lower is better)
Translates to: HIFDLWSSVSPP*FFRVQSLCMVW
Trigger: CCATACCATGCAGAGGGACTGGACCCTGAAAAATCAAGGAGGACTGACAGAACTCCATAAATCAAAGATATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635310.1
CDS TCA 72 bp GTTATCCTGTGGTTCAAATCCTGGGGTTCCATGATGTaGATTGATCTTACTTATCTGGGCCAAGTGTCTCCT +
Preference number: 6 (lower is better)
Translates to: VILWFKSWGSMM*IDLTYLGQVSP
Trigger: AGGAGACACTTGGCCCAGATAAGTAAGATCAATTCACATCATGGAACCCCAGGATTTGAACCACAGGATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637975.1
CDS GCA 72 bp TTTCCTTTACTTTTACCTTGGTCGCCCATCATCAGGTaGGCCAGACCTTCCACATTGTTGTCTTTTTCTGTT +
Preference number: 6 (lower is better)
Translates to: FPLLLPWSPIIR*ARPSTLLSFSV
Trigger: AACAGAAAAAGACAACAATGTGGAAGGTCTGGCGCACCTGATGATGGGCGACCAAGGTAAAAGTAAAGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404971.5
CDS GCA 72 bp TCCTCTTTACTTTTACCTTGGTCGCCCATCATCAGGTaGGCCAGACCTTCCACATTGTTGTCTTCTATATTA +
Preference number: 6 (lower is better)
Translates to: SSLLLPWSPIIR*ARPSTLLSSIL
Trigger: TAATATAGAAGACAACAATGTGGAAGGTCTGGCGCACCTGATGATGGGCGACCAAGGTAAAAGTAAAGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630431.1
CDS GCA 72 bp CTCTTCTTCCACCTCATTGGTCAGTGCAAATCCAACTaGTCTTTAAGACTCTTAACTTCAGCCAGTCCTCTT +
Preference number: 6 (lower is better)
Translates to: LFFHLIGQCKSN*SLRLLTSASPL
Trigger: AAGAGGACTGGCTGAAGTTAAGAGTCTTAAAGAGCAGTTGGATTTGCACTGACCAATGAGGTGGAAGAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630431.1
CDS GCA 72 bp TTCTCTTTACTTTTACCTTGGTCGCCCATCATCAGGTaGGCCAGACCTTCCACATTGTTGTCTTTTTCTGTT +
Preference number: 6 (lower is better)
Translates to: FSLLLPWSPIIR*ARPSTLLSFSV
Trigger: AACAGAAAAAGACAACAATGTGGAAGGTCTGGCGCACCTGATGATGGGCGACCAAGGTAAAAGTAAAGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627198.2
CDS CCA 72 bp AACCTTTGGATTTCTTCTTGTGGAAGTTCTTCCGCATaGGATGTTATTTGCGCTCACTTCAGCTTCACACCA +
Preference number: 6 (lower is better)
Translates to: NLWISSCGSSSA*DVICAHFSFTP
Trigger: TGGTGTGAAGCTGAAGTGAGCGCAAATAACATCCCATGCGGAAGAACTTCCACAAGAAGAAATCCAAAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635126.1
ENST00000635310.1
CDS CCA 72 bp TCCTTCCTCTCTCTTCTAGCATTTGGTAAGATACGGTaGTCTCTAGAAGTTTTCCACATGGTCTGCTTTGTC +
Preference number: 6 (lower is better)
Translates to: SFLSLLAFGKIR*SLEVFHMVCFV
Trigger: GACAAAGCAGACCATGTGGAAAACTTCTAGAGACCACCGTATCTTACCAAATGCTAGAAGAGAGAGGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635519.1
CDS CCA 72 bp CACAATTCACTTCGGGGCCGAATATGTGTATATGGCTaGTCTTCCTTGGATCCAATCCAAGGACATTTAAGT +
Preference number: 6 (lower is better)
Translates to: HNSLRGRICVYG*SSLDPIQGHLS
Trigger: ACTTAAATGTCCTTGGATTGGATCCAAGGAAGACCAGCCATATACACATATTCGGCCCCGAAGTGAATTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637889.1
CDS CCA 72 bp ATAGCACAATTCACTTCGGGGCCGAATATGTGTATATaGCTGGTCTTCCTTGGATCCAATCCAAGGACATTT +
Preference number: 6 (lower is better)
Translates to: IAQFTSGPNMCI*LVFLGSNPRTF
Trigger: AAATGTCCTTGGATTGGATCCAAGGAAGACCAGCCATATACACATATTCGGCCCCGAAGTGAATTGTGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637889.1
CDS CAA 72 bp TTTTTATATACAACCTCTTTGAGACAGCCCATAAAGTaGTTACTGACTGGTGACCCTGGAAGGTCGGCTGTG +
Preference number: 6 (lower is better)
Translates to: FLYTTSLRQPIK*LLTGDPGRSAV
Trigger: CACAGCCGACCTTCCAGGGTCACCAGTCAGTAACAACTTTATGGGCTGTCTCAAAGAGGTTGTATATAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000331040.9
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000625672.2
ENST00000630543.2
ENST00000636298.1
CDS CAA 72 bp ACCACTCCATGGATCTTCATCTTAGGATCTCCTTGCTaGGCAAGTCGAGATAATTCCAGCCTCACATCATTA +
Preference number: 6 (lower is better)
Translates to: TTPWIFILGSPC*ASRDNSSLTSL
Trigger: TAATGATGTGAGGCTGGAATTATCTCGACTTGCCAAGCAAGGAGATCCTAAGATGAAGATCCATGGAGTGGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331040.9
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000495871.2
ENST00000625672.2
ENST00000630543.2
ENST00000636298.1
CDS CAA 72 bp TGCAGGGCCAAGCTAAGATGCCAGCACATCAATTGGTaGTGTGTTGGTGATGCATTTTGGTTTTATCTTGTC +
Preference number: 6 (lower is better)
Translates to: CRAKLRCQHINW*CVGDAFWFYLV
Trigger: GACAAGATAAAACCAAAATGCATCACCAACACACAACCAATTGATGTGCTGGCATCTTAGCTTGGCCCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000405581.3
ENST00000406316.6
ENST00000626899.1
ENST00000628515.2
ENST00000635310.1
ENST00000637511.1
CDS CAA 90 bp GGTGTAAACAGCACCAGAAACGAAGATGAGGAGCTGGCATTATCTTaGAATCTGCTGCTGTCTGATTTTGGTCAAATCCTTAAGTCGCTT +
Preference number: 6 (lower is better)
Translates to: GVNSTRNEDEELALS*NLLLSDFGQILKSL
Trigger: AAGCGACTTAAGGATTTGACCAAAATCAGACAGCAGCAGATTCAAAGATAATGCCAGCTCCTCATCTTCGTTTCTGGTGCTGTTTACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416262.6
ENST00000447773.2
ENST00000636104.1
ENST00000637368.1
ENST00000637975.1
CDS CAA 90 bp GACCATGAATTAGGAATGATTCTGATGGCAACGATATTTACCTCTTaGAGACAGCCCATAAAGTTGTTACTGACTGGTGACCCTGGAAGG +
Preference number: 6 (lower is better)
Translates to: DHELGMILMATIFTS*RQPIKLLLTGDPGR
Trigger: CCTTCCAGGGTCACCAGTCAGTAACAACTTTATGGGCTGTCTCAAAGAGGTAAATATCGTTGCCATCAGAATCATTCCTAATTCATGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS TCA 72 bp GCACCAGAAACGAAGATGAGGAGCTGGCATTATCTTTaGATCTGCTGCTGTCTGATTTTGGTCAAATCCTTA +
Preference number: 6 (lower is better)
Translates to: APETKMRSWHYL*ICCCLILVKSL
Trigger: TAAGGATTTGACCAAAATCAGACAGCAGCAGATTCAAAGATAATGCCAGCTCCTCATCTTCGTTTCTGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416262.6
ENST00000447773.2
ENST00000636104.1
ENST00000637368.1
ENST00000637975.1
CDS TCA 72 bp ACTTTTCATTGTTGTTGGTGGGCTGGTTCAGGTTCTTaGCTTTCTTTTGTTGACTCACCATCCGTAGACATC +
Preference number: 6 (lower is better)
Translates to: TFHCCWWAGSGS*LSFVDSPSVDI
Trigger: GATGTCTACGGATGGTGAGTCAACAAAAGAAAGTCAAGAACCTGAACCAGCCCACCAACAACAATGAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635126.1
ENST00000636104.1
CDS TCA 72 bp TTGTCTAGCATCTGGATGCAGAAGATCTGGATGCAGTaGAAGACTCAAAGGCTATATGCAGTTCTAGGTAGT +
Preference number: 6 (lower is better)
Translates to: LSSIWMQKIWMQ*KTQRLYAVLGS
Trigger: ACTACCTAGAACTGCATATAGCCTTTGAGTCTTTCACTGCATCCAGATCTTCTGCATCCAGATGCTAGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637906.1
CDS CCA 72 bp GGACCTTTGCCTGTAGAATATGCCAAACAGTCATTATaGACACTCAGAATCAGTCAAGCAAATGAACCTCAC +
Preference number: 6 (lower is better)
Translates to: GPLPVEYAKQSL*TLRISQANEPH
Trigger: GTGAGGTTCATTTGCTTGACTGATTCTGAGTGTCCATAATGACTGTTTGGCATATTCTACAGGCAAAGGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462791.2
CDS CAA 72 bp AGCACCAGAAACGAAGATGAGGAGCTGGCATTATCTTaGAATCTGCTGCTGTCTGATTTTGGTCAAATCCTT +
Preference number: 6 (lower is better)
Translates to: STRNEDEELALS*NLLLSDFGQIL
Trigger: AAGGATTTGACCAAAATCAGACAGCAGCAGATTCAAAGATAATGCCAGCTCCTCATCTTCGTTTCTGGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416262.6
ENST00000447773.2
ENST00000636104.1
ENST00000637368.1
ENST00000637975.1
CDS CAA 72 bp TCTTCCAGGTTGCAGACTGCTGACTTTTCATTGTTGTaGGTGGGCTGGTTCAGGTTCTTGACTTTCTTTTAT +
Preference number: 6 (lower is better)
Translates to: SSRLQTADFSLL*VGWFRFLTFFY
Trigger: ATAAAAGAAAGTCAAGAACCTGAACCAGCCCACCAACAACAATGAAAAGTCAGCAGTCTGCAACCTGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447773.2
CDS CAA 72 bp TTCTTCTTGTGGAAGTTCTTCCGCATGGGATGTTATTaGCGCTCACTTCAGCTTCACACCACGACAAAAATA +
Preference number: 6 (lower is better)
Translates to: FFLWKFFRMGCY*RSLQLHTTTKI
Trigger: TATTTTTGTCGTGGTGTGAAGCTGAAGTGAGCGCAAATAACATCCCATGCGGAAGAACTTCCACAAGAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635126.1
ENST00000635310.1
CDS CAA 90 bp CAGACTGCTGACTTTTCATTGTTGTTGGTGGGCTGGTTCAGGTTCTaGACTTTCTTTTATATCCTAGTCACCAAGAGGGAGTTCTCAAAT +
Preference number: 6 (lower is better)
Translates to: QTADFSLLLVGWFRF*TFFYILVTKREFSN
Trigger: ATTTGAGAACTCCCTCTTGGTGACTAGGATATAAAAGAAAGTCAAGAACCTGAACCAGCCCACCAACAACAATGAAAAGTCAGCAGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447773.2
CDS CAA 90 bp ATGAATGAGCTACATTACATTCATCAGTCTAGGTGTTGGCTTTCTTaGGGATCAATCAGCTTCTCTCTTCTTCCACCTCATTGGTCAGTG +
Preference number: 6 (lower is better)
Translates to: MNELHYIHQSRCWLS*GSISFSLLPPHWSV
Trigger: CACTGACCAATGAGGTGGAAGAAGAGAGAAGCTGATTGATCCCAAAGAAAGCCAACACCTAGACTGATGAATGTAATGTAGCTCATTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630431.1
CDS CAA 90 bp CTAATTCTCCACAGGCCTAGGGAATGTTTGAATGCCAAGGCATTTTaGCTTTTCTCGAGAATAAGGACTAGATTTCACATACAGCGTGCA +
Preference number: 6 (lower is better)
Translates to: LILHRPRECLNAKAF*LFSRIRTRFHIQRA
Trigger: TGCACGCTGTATGTGAAATCTAGTCCTTATTCTCGAGAAAAGCAAAAATGCCTTGGCATTCAAACATTCCCTAGGCCTGTGGAGAATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630656.1
CDS CAA 90 bp CCTTTGGATTTCTTCTTGTGGAAGTTCTTCCGCATGGGATGTTATTaGCGCTCACTTCAGCTTCACACCACGACAAAAATAACTTGGTTA +
Preference number: 6 (lower is better)
Translates to: PLDFFLWKFFRMGCY*RSLQLHTTTKITWL
Trigger: TAACCAAGTTATTTTTGTCGTGGTGTGAAGCTGAAGTGAGCGCAAATAACATCCCATGCGGAAGAACTTCCACAAGAAGAAATCCAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635126.1
ENST00000635310.1
CDS TCA 72 bp AAGAATGCACTGAAGATAGTGATTTGCAGCAGGTGCTaGGGCTCCCTTGATATATGTACATATACATGTCTG +
Preference number: 6 (lower is better)
Translates to: KNALKIVICSRC*GSLDICTYTCL
Trigger: CAGACATGTATATGTACATATATCAAGGGAGCCTCAGCACCTGCTGCAAATCACTATCTTCAGTGCATTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637889.1
CDS GCA 72 bp GTAATCTATGTCGCCATTTTTACACAGGTCAATGTATaGCATTCCATTAAATGTCAAGCTCTGCAGGTGTCC +
Preference number: 6 (lower is better)
Translates to: VIYVAIFTQVNV*HSIKCQALQVS
Trigger: GGACACCTGCAGAGCTTGACATTTAATGGAATGGCATACATTGACCTGTGTAAAAATGGCGACATAGATTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000331040.9
ENST00000401669.7
ENST00000404971.5
ENST00000405472.7
ENST00000406316.6
ENST00000462791.2
ENST00000625672.2
ENST00000630543.2
ENST00000636298.1
CDS GCA 72 bp TGCAGCCATATAATTTGCAAGCATTTGCCCATCCTTTaGAGTGATGGTTTGAAAGCAGCTACAGAACAAGAA +
Preference number: 6 (lower is better)
Translates to: CSHIICKHLPIL*SDGLKAATEQE
Trigger: TTCTTGTTCTGTAGCTGCTTTCAAACCATCACTGCAAAGGATGGGCAAATGCTTGCAAATTATATGGCTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496792.3
CDS CAA 90 bp CTCCCCCAATCCTACATAAACAATAGTAGAATATTGAATTTAAAGTaGTGCCGTTTGACTCTGGAACATCGGGTCTTCAGCAAAGGTGCT +
Preference number: 6 (lower is better)
Translates to: LPQSYINNSRILNLK*CRLTLEHRVFSKGA
Trigger: AGCACCTTTGCTGAAGACCCGATGTTCCAGAGTCAAACGGCACAACTTTAAATTCAATATTCTACTATTGTTTATGTAGGATTGGGGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000625891.2
ENST00000628515.2
ENST00000628761.1
CDS TCA 72 bp TGGTGCCTCAGCTTCTTCATTAACAACATGTGGTTATaGGACTTGTCCTTCTCACTGCATACTCTTTTTCTT +
Preference number: 6 (lower is better)
Translates to: WCLSFFINNMWL*DLSFSLHTLFL
Trigger: AAGAAAAAGAGTATGCAGTGAGAAGGACAAGTCTCATAACCACATGTTGTTAATGAAGAAGCTGAGGCACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000416262.6
ENST00000447773.2
ENST00000636104.1
ENST00000637368.1
ENST00000637975.1
CDS TCA 72 bp CCATATAATTTGCAAGCATTTGCCCATCCTTTGCAGTaGTGGTTTGAAAGCAGCTACAGAACAAGAAAACAC +
Preference number: 6 (lower is better)
Translates to: PYNLQAFAHPLQ*WFESSYRTRKH
Trigger: GTGTTTTCTTGTTCTGTAGCTGCTTTCAAACCATCACTGCAAAGGATGGGCAAATGCTTGCAAATTATATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496792.3
CDS TCA 72 bp CTATCATTTGCCTACAATTTCACTATATTACCCACATaGCCTCTCAACAAGCCTGTAATGTGGGTAGGCTAT +
Preference number: 6 (lower is better)
Translates to: LSFAYNFTILPT*PLNKPVMWVGY
Trigger: ATAGCCTACCCACATTACAGGCTTGTTGAGAGGTCATGTGGGTAATATAGTGAAATTGTAGGCAAATGATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636298.1
CDS CAA 72 bp CACAGGCCTAGGGAATGTTTGAATGCCAAGGCATTTTaGCTTTTCTCGAGAATAAGGACTAGATTTCACATA +
Preference number: 6 (lower is better)
Translates to: HRPRECLNAKAF*LFSRIRTRFHI
Trigger: TATGTGAAATCTAGTCCTTATTCTCGAGAAAAGCAAAAATGCCTTGGCATTCAAACATTCCCTAGGCCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630656.1
CDS CAA 72 bp TTAGGAATGATTCTGATGGCAACGATATTTACCTCTTaGAGACAGCCCATAAAGTTGTTACTGACTGGTGAC +
Preference number: 6 (lower is better)
Translates to: LGMILMATIFTS*RQPIKLLLTGD
Trigger: GTCACCAGTCAGTAACAACTTTATGGGCTGTCTCAAAGAGGTAAATATCGTTGCCATCAGAATCATTCCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628515.2
CDS CAA 90 bp TCCTACATAAACAATAGTAGAATATTGAATTTAAAGTTGTGCCGTTaGACTCTGGAACATCGGGTCTTCAGCAAAGGTGCTTTCATGCTG +
Preference number: 6 (lower is better)
Translates to: SYINNSRILNLKLCR*TLEHRVFSKGAFML
Trigger: CAGCATGAAAGCACCTTTGCTGAAGACCCGATGTTCCAGAGTCAAACGGCACAACTTTAAATTCAATATTCTACTATTGTTTATGTAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625891.2
ENST00000628515.2
ENST00000628761.1
CDS GCA 72 bp TTAACAACATGTGGTTATGAGACTTGTCCTTCTCACTaGATACTCTTTTTCTTTGTGATTATCTGGGCCAAG +
Preference number: 6 (lower is better)
Translates to: LTTCGYETCPSH*ILFFFVIIWAK
Trigger: CTTGGCCCAGATAATCACAAAGAAAAAGAGTATGCAGTGAGAAGGACAAGTCTCATAACCACATGTTGTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000416262.6
ENST00000447773.2
ENST00000636104.1
ENST00000637368.1
CDS CCA 72 bp ATGAATGAGCTACATTACATTCATCAGTCTAGGTGTTaGCTTTCTTTGGGATCAATCAGCTTCTCTCTTCTT +
Preference number: 6 (lower is better)
Translates to: MNELHYIHQSRC*LSLGSISFSLL
Trigger: AAGAAGAGAGAAGCTGATTGATCCCAAAGAAAGCCAACACCTAGACTGATGAATGTAATGTAGCTCATTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630431.1
CDS TCA 72 bp TTTAGCCACTTCAGCACATCCAGGAAAATGACATTATaGATGAGCTACATTACATTCATCAGTCTAGGTGTT +
Preference number: 6 (lower is better)
Translates to: FSHFSTSRKMTL*MSYITFISLGV
Trigger: AACACCTAGACTGATGAATGTAATGTAGCTCATTCATAATGTCATTTTCCTGGATGTGCTGAAGTGGCTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630431.1
CDS CAA 72 bp TCCTACATAAACAATAGTAGAATATTGAATTTAAAGTaGTGCCGTTTGACTCTGGAACATCGGGTCTTCAGC +
Preference number: 6 (lower is better)
Translates to: SYINNSRILNLK*CRLTLEHRVFS
Trigger: GCTGAAGACCCGATGTTCCAGAGTCAAACGGCACAACTTTAAATTCAATATTCTACTATTGTTTATGTAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625891.2
ENST00000628515.2
ENST00000628761.1
CDS CAA 72 bp TCATTCTTCCTGGAAAGAAAGTCCTACTACTTTACCTaGCTTAGTAAATCTAGGTGCTGCTCTTTCCTAAAT +
Preference number: 6 (lower is better)
Translates to: SFFLERKSYYFT*LSKSRCCSFLN
Trigger: ATTTAGGAAAGAGCAGCACCTAGATTTACTAAGCAAGGTAAAGTAGTAGGACTTTCTTTCCAGGAAGAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637889.1
CDS CAA 72 bp GCATTAGGTGTTTTTATTCCTATTTTACAGATGAAGTaGGATGTCTGTCTAGATACATTGCCAGTTCTTCCT +
Preference number: 6 (lower is better)
Translates to: ALGVFIPILQMK*DVCLDTLPVLP
Trigger: AGGAAGAACTGGCAATGTATCTAGACAGACATCCAACTTCATCTGTAAAATAGGAATAAAAACACCTAATGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637889.1
CDS TCA 72 bp TTTGAGACAAGTCGTAGCAGAAGTATTCAGATCCTTTaGACGTGGCAATATATTCTTCTTTTCCATGTTAAT +
Preference number: 6 (lower is better)
Translates to: FETSRSRSIQIL*TWQYILLFHVN
Trigger: ATTAACATGGAAAAGAAGAATATATTGCCACGTTCAAAGGATCTGAATACTTCTGCTACGACTTGTCTCAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630431.1