RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NRSN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000125841

Ensembl transcript IDs: ENST00000382285.7, ENST00000382291.7, ENST00000470439.5, ENST00000492242.5, ENST00000608467.5, ENST00000608736.1, ENST00000608875.1, ENST00000609179.5, ENST00000609504.5, ENST00000621012.1

Found 469 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGCAGGGAAAGGCCAAGTGAGCATCTGGGACCCATTCGAGCTGAATaGCCCCCACCCCTTCATCTGTGTCTATGGAGGGCAGTGCGTGTC +
Preference number: 1 (lower is better)
Translates to: CRERPSEHLGPIRAE*PPPLHLCLWRAVRV
Trigger: GACACGCACTGCCCTCCATAGACACAGATGAAGGGGTGGGGGTCATTCAGCTCGAATGGGTCCCAGATGCTCACTTGGCCTTTCCCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR TCA 90 bp TGGCTCCGCCCCACCTGTAGCACAAGAGCTGGCCCAGGAGGAGGCTaGAGATGTGTTTCTAGTTCCTGCATGCTGCTTTGTTGTGTGACC +
Preference number: 1 (lower is better)
Translates to: WLRPTCSTRAGPGGG*RCVSSSCMLLCCVT
Trigger: GGTCACACAACAAAGCAGCATGCAGGAACTAGAAACACATCTTCAGCCTCCTCCTGGGCCAGCTCTTGTGCTACAGGTGGGGCGGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
3UTR GCA 90 bp GAGCTGAATGACCCCCACCCCTTCATCTGTGTCTATGGAGGGCAGTaGGTGTCCTCATCCTGGCGAGAAGAGGAATCTGATCCAAAGCCC +
Preference number: 1 (lower is better)
Translates to: ELNDPHPFICVYGGQ*VSSSWREEESDPKP
Trigger: GGGCTTTGGATCAGATTCCTCTTCTCGCCAGGATGAGGACACGCACTGCCCTCCATAGACACAGATGAAGGGGTGGGGGTCATTCAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR CCA 90 bp CACCCCTTCATCTGTGTCTATGGAGGGCAGTGCGTGTCCTCATCCTaGCGAGAAGAGGAATCTGATCCAAAGCCCTCATGGCAGAGAGGC +
Preference number: 1 (lower is better)
Translates to: HPFICVYGGQCVSSS*REEESDPKPSWQRG
Trigger: GCCTCTCTGCCATGAGGGCTTTGGATCAGATTCCTCTTCTCGCCAGGATGAGGACACGCACTGCCCTCCATAGACACAGATGAAGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR CCA 90 bp GCAAACGTCTTCACTCATCCTGCAGGGAAAGGCCAAGTGAGCATCTaGGACCCATTCGAGCTGAATGACCCCCACCCCTTCATCTGTGTC +
Preference number: 1 (lower is better)
Translates to: ANVFTHPAGKGQVSI*DPFELNDPHPFICV
Trigger: GACACAGATGAAGGGGTGGGGGTCATTCAGCTCGAATGGGTCCCAGATGCTCACTTGGCCTTTCCCTGCAGGATGAGTGAAGACGTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR GCA 90 bp GCAGGTAGAAGACACACTGTGAGAGGCAAACGTCTTCACTCATCCTaGAGGGAAAGGCCAAGTGAGCATCTGGGACCCATTCGAGCTGAA +
Preference number: 1 (lower is better)
Translates to: AGRRHTVRGKRLHSS*RERPSEHLGPIRAE
Trigger: TTCAGCTCGAATGGGTCCCAGATGCTCACTTGGCCTTTCCCTGCAGGATGAGTGAAGACGTTTGCCTCTCACAGTGTGTCTTCTACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR CCA 90 bp GCCTCTGAGAGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTaGGCTTGGTTTCTAGGTAGGTGGACTTTGAGGGGCAAAGACAAC +
Preference number: 1 (lower is better)
Translates to: ASERAHLLSGSRPRP*AWFLGRWTLRGKDN
Trigger: GTTGTCTTTGCCCCTCAAAGTCCACCTACCTAGAAACCAAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCTCTCAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
3UTR CCA 90 bp GAGAGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTaGTTTCTAGGTAGGTGGACTTTGAGGGGCAAAGACAACCCACTT +
Preference number: 1 (lower is better)
Translates to: ERAHLLSGSRPRPWA*FLGRWTLRGKDNPL
Trigger: AAGTGGGTTGTCTTTGCCCCTCAAAGTCCACCTACCTAGAAACCAAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
3UTR GCA 90 bp AGGCTGACGTTACGGATTTGGGGGAAGAATGCCACTCAGGCCAAGTaGCCTTCTCACCACATCATTTCAGAGGCTGTGATATCAACAAGA +
Preference number: 1 (lower is better)
Translates to: RLTLRIWGKNATQAK*PSHHIISEAVISTR
Trigger: TCTTGTTGATATCACAGCCTCTGAAATGATGTGGTGAGAAGGGCACTTGGCCTGAGTGGCATTCTTCCCCCAAATCCGTAACGTCAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608736.1
3UTR CCA 90 bp TCCAACCTGAGACCGTTTCTTGTCCTTTCCTTGTCTTTCGTGACCTaGACACATTTGAAGAGTGCTGGTCAGATCTTTTGTAGAATGGGT +
Preference number: 1 (lower is better)
Translates to: SNLRPFLVLSLSFVT*THLKSAGQIFCRMG
Trigger: ACCCATTCTACAAAAGATCTGACCAGCACTCTTCAAATGTGTCCAGGTCACGAAAGACAAGGAAAGGACAAGAAACGGTCTCAGGTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608736.1
3UTR-3UTR TCA 90 bp TGGTGGGGGCCGCCTGAGGATCCCCTAGGAGGCCCTTCAGGCTGGTGGAGACTGGGGACCCATTCGAGCTaGATGACCCCCACCCCTTCA +
Preference number: 2 (lower is better)
Translates to: WWGPPEDPLGGPSGWWRLGTHSS*MTPTPS
Trigger: TGAAGGGGTGGGGGTCATTCAGCTCGAATGGGTCCC...CAGTCTCCACCAGCCTGAAGGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR GCA 90 bp TGGTGGGGGCCGCCTGAGGATCCCCTAGGAGGCCCTTCAGGCTGGTGGAGACTGACTAGGGCTAGTAATTaGCTGTGGTGGGTGGGCTGG +
Preference number: 2 (lower is better)
Translates to: WWGPPEDPLGGPSGWWRLTRASN*LWWVGW
Trigger: CCAGCCCACCCACCACAGGCAATTACTAGCCCTAGT...CAGTCTCCACCAGCCTGAAGGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
3UTR-3UTR CCA 90 bp TGGTGGGGGCCGCCTGAGGATCCCCTAGGAGGCCCTTCAGGCTGGTGGAGACTGGATTTGACCTGGAGTTaGGCTCTAAAGGGACCCTGC +
Preference number: 2 (lower is better)
Translates to: WWGPPEDPLGGPSGWWRLDLTWS*ALKGPC
Trigger: GCAGGGTCCCTTTAGAGCCCAACTCCAGGTCAAATC...CAGTCTCCACCAGCCTGAAGGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR CCA 90 bp TGGTGGGGGCCGCCTGAGGATCCCCTAGGAGGCCCTTCAGGCTGGTGGAGACTGCTGGGGAGGGAGCACTaGGATTTGAGCTCCAGATTT +
Preference number: 2 (lower is better)
Translates to: WWGPPEDPLGGPSGWWRLLGREH*DLSSRF
Trigger: AAATCTGGAGCTCAAATCCCAGTGCTCCCTCCCCAG...CAGTCTCCACCAGCCTGAAGGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR CCA 90 bp TGGTGGGGGCCGCCTGAGGATCCCCTAGGAGGCCCTTCAGGCTGGTGGAGACTGCTTCATCTGTGTCTATaGAGGGCAGTGCGTGTCCTC +
Preference number: 2 (lower is better)
Translates to: WWGPPEDPLGGPSGWWRLLHLCL*RAVRVL
Trigger: GAGGACACGCACTGCCCTCCATAGACACAGATGAAG...CAGTCTCCACCAGCCTGAAGGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR CCA 90 bp GGGTTGAAGGAGATGTTTTCTGCCCCTGAGGGCCTTGGGAAGAGGGTGTGGGTATTGGGGCCCCACTCCTaGGGAGGGAGCACTGGGATT +
Preference number: 2 (lower is better)
Translates to: GLKEMFSAPEGLGKRVWVLGPHS*GGSTGI
Trigger: AATCCCAGTGCTCCCTCCCCAGGAGTGGGGCCCCAA...TACCCACACCCTCTTCCCAAGGCCCTCAGGGGCAGAAAACATCTCCTTCAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR CCA 90 bp TGGTGGGGGCCGCCTGAGGATCCCCTAGGAGGCCCTTCAGGCTGGTGGAGACTGGTGGGTAGGAAGTTTTaGGAGGACTTGAGGAATGCT +
Preference number: 2 (lower is better)
Translates to: WWGPPEDPLGGPSGWWRLVGRKF*EDLRNA
Trigger: AGCATTCCTCAAGTCCTCCCAAAACTTCCTACCCAC...CAGTCTCCACCAGCCTGAAGGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR TCA 90 bp GCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCTCCGGCTGGGGACCCATTCGAGCTGAATaGCCCCCACCCCTTCATCTG +
Preference number: 2 (lower is better)
Translates to: ASELPLVVQKRDDASGWGPIRAE*PPPLHL
Trigger: CAGATGAAGGGGTGGGGGTCATTCAGCTCGAATGGG...TCCCCAGCCGGAGGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR CCA 90 bp AGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGGTTTCTAGGTAGGAAGGTGAGGGGCTaGCTCCGCCCCACCTGTAGC +
Preference number: 2 (lower is better)
Translates to: RAHLLSGSRPRPWAWFLGRKVRG*LRPTCS
Trigger: GCTACAGGTGGGGCGGAGCCAGCCCCTCACCTTCCT...ACCTAGAAACCAAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
3UTR-3UTR TCA 90 bp TCATCCTGGCGAGAAGAGGAATCTGATCCAAAGCCCTCATGGCAGAGAGGCAGGGGAGTGGGGACGGGTTaGAGGAGATGTTTTCTGCCC +
Preference number: 2 (lower is better)
Translates to: SSWREEESDPKPSWQRGRGVGTG*RRCFLP
Trigger: GGGCAGAAAACATCTCCTTCAACCCGTCCCCACTCC...CCTGCCTCTCTGCCATGAGGGCTTTGGATCAGATTCCTCTTCTCGCCAGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR TCA 90 bp GCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCTCCGGCTGGGGAGCGAGAAGAGGAATCTaGTCCAAAGCCCTCATGGCA +
Preference number: 2 (lower is better)
Translates to: ASELPLVVQKRDDASGWGARRGI*SKALMA
Trigger: TGCCATGAGGGCTTTGGATCAGATTCCTCTTCTCGC...TCCCCAGCCGGAGGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR TCA 90 bp TGCTCTCCAGCTGCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCCCCATTCGAGCTGAATaGCCCCCACCCCTTCATCTG +
Preference number: 2 (lower is better)
Translates to: CSPAASELPLVVQKRDDAPIRAE*PPPLHL
Trigger: CAGATGAAGGGGTGGGGGTCATTCAGCTCGAATGGG...GGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGCAGCTGGAGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR CCA 90 bp GGCTTGAAAGGGCAAGGGTTTGCCCAAGGTCATGCAGAGGAAGGAGTGGGGACGGGAATGCTGGTATCTTaGAAGAGTTGGGGCCCCACT +
Preference number: 2 (lower is better)
Translates to: GLKGQGFAQGHAEEGVGTGMLVS*KSWGPT
Trigger: AGTGGGGCCCCAACTCTTCCAAGATACCAGCATTCC...CGTCCCCACTCCTTCCTCTGCATGACCTTGGGCAAACCCTTGCCCTTTCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR TCA 90 bp TGCTCTCCAGCTGCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCGGGAGCACTGGGATTTaGGCTCCAGATTTGACCTGG +
Preference number: 2 (lower is better)
Translates to: CSPAASELPLVVQKRDDAGSTGI*APDLTW
Trigger: CCAGGTCAAATCTGGAGCTCAAATCCCAGTGCTCCC...GGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGCAGCTGGAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR TCA 90 bp GCGCCTCTGAGAGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGCGAGAAGAGGAATCTaGTCCAAAGCCCTCATGGCA +
Preference number: 2 (lower is better)
Translates to: APLREPIYYQGHGQDRGLARRGI*SKALMA
Trigger: TGCCATGAGGGCTTTGGATCAGATTCCTCTTCTCGC...AAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCTCTCAGAGGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR CCA 90 bp GGGTTGAAGGAGATGTTTTCTGCCCCTGAGGGCCTTGGGAAGAGGGTGTGGGTAGGAATGCTGGTATCTTaGAAGAGTTGGGGCCCCACT +
Preference number: 2 (lower is better)
Translates to: GLKEMFSAPEGLGKRVWVGMLVS*KSWGPT
Trigger: AGTGGGGCCCCAACTCTTCCAAGATACCAGCATTCC...TACCCACACCCTCTTCCCAAGGCCCTCAGGGGCAGAAAACATCTCCTTCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR CCA 90 bp AGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGGTTTCTAGGTCTGTGGTGGGTGGGCTaGGGGGCTCTGATGCCAAAA +
Preference number: 2 (lower is better)
Translates to: RAHLLSGSRPRPWAWFLGLWWVG*GALMPK
Trigger: TTTTGGCATCAGAGCCCCCCAGCCCACCCACCACAG...ACCTAGAAACCAAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
3UTR-3UTR TCA 90 bp CCTGTAGCACAAGAGCTGGCCCAGGAGGAGGCTGAAGATGTGTTTCTAGTTCCTGGGAGCACTGGGATTTaGGCTCCAGATTTGACCTGG +
Preference number: 2 (lower is better)
Translates to: PVAQELAQEEAEDVFLVPGSTGI*APDLTW
Trigger: CCAGGTCAAATCTGGAGCTCAAATCCCAGTGCTCCC...AGGAACTAGAAACACATCTTCAGCCTCCTCCTGGGCCAGCTCTTGTGCTACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR TCA 90 bp AGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGGTTTCTAGGTCAGAGAGGCAGGAGCTaGTGGCTTGAAAGGGCAAGG +
Preference number: 2 (lower is better)
Translates to: RAHLLSGSRPRPWAWFLGQRGRS*WLERAR
Trigger: CCTTGCCCTTTCAAGCCATCAGCTCCTGCCTCTCTG...ACCTAGAAACCAAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR TCA 90 bp GCAGGTAGAAGACACACTGTGAGAGGCAAACGTCTTCACTCATCCTGCAGGGAACAGAGAGGCAGGAGCTaGTGGCTTGAAAGGGCAAGG +
Preference number: 2 (lower is better)
Translates to: AGRRHTVRGKRLHSSCREQRGRS*WLERAR
Trigger: CCTTGCCCTTTCAAGCCATCAGCTCCTGCCTCTCTG...TTCCCTGCAGGATGAGTGAAGACGTTTGCCTCTCACAGTGTGTCTTCTACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR GCA 90 bp AGGCCTCTGGCTAGTCTTTCTGGGCCAAACCTGTCCTCCACCCTGAGGACCCTCGGAGGACTTGAGGAATaGTGGTATCTTGGAAGAGTT +
Preference number: 2 (lower is better)
Translates to: RPLASLSGPNLSSTLRTLGGLEE*WYLGRV
Trigger: AACTCTTCCAAGATACCAGCATTCCTCAAGTCCTCC...GAGGGTCCTCAGGGTGGAGGACAGGTTTGGCCCAGAAAGACTAGCCAGAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR CCA 90 bp GCGCCTCTGAGAGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTTGCGTGTCCTCATCCTaGCGAGAAGAGGAATCTGAT +
Preference number: 2 (lower is better)
Translates to: APLREPIYYQGHGQDRGLCVSSS*REEESD
Trigger: ATCAGATTCCTCTTCTCGCCAGGATGAGGACACGCA...AAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCTCTCAGAGGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR TCA 90 bp TCATCCTGGCGAGAAGAGGAATCTGATCCAAAGCCCTCATGGCAGAGAGGCAGGAAGTTGGGGAAACACTaGGAGGGGGTTATGGTGAGA +
Preference number: 2 (lower is better)
Translates to: SSWREEESDPKPSWQRGRKLGKH*EGVMVR
Trigger: TCTCACCATAACCCCCTCTCAGTGTTTCCCCAACTT...CCTGCCTCTCTGCCATGAGGGCTTTGGATCAGATTCCTCTTCTCGCCAGGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR TCA 90 bp TGCTCTCCAGCTGCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCAAGTTGGGGAAACACTaGGAGGGGGTTATGGTGAGA +
Preference number: 2 (lower is better)
Translates to: CSPAASELPLVVQKRDDAKLGKH*EGVMVR
Trigger: TCTCACCATAACCCCCTCTCAGTGTTTCCCCAACTT...GGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGCAGCTGGAGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR GCA 90 bp GGCTTGAAAGGGCAAGGGTTTGCCCAAGGTCATGCAGAGGAAGGAGTGGGGACGGGAGGACTTGAGGAATaGTGGTATCTTGGAAGAGTT +
Preference number: 2 (lower is better)
Translates to: GLKGQGFAQGHAEEGVGTGGLEE*WYLGRV
Trigger: AACTCTTCCAAGATACCAGCATTCCTCAAGTCCTCC...CGTCCCCACTCCTTCCTCTGCATGACCTTGGGCAAACCCTTGCCCTTTCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR GCA 90 bp GCAGGTAGAAGACACACTGTGAGAGGCAAACGTCTTCACTCATCCTGCAGGGAAGTTTGCCCAAGGTCATaGAGAGGAAGGAGTGGGGAC +
Preference number: 2 (lower is better)
Translates to: AGRRHTVRGKRLHSSCREVCPRS*RGRSGD
Trigger: GTCCCCACTCCTTCCTCTGCATGACCTTGGGCAAAC...TTCCCTGCAGGATGAGTGAAGACGTTTGCCTCTCACAGTGTGTCTTCTACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR GCA 90 bp AGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGGTTTCTAGGTGTTTGCCCAAGGTCATaGAGAGGAAGGAGTGGGGAC +
Preference number: 2 (lower is better)
Translates to: RAHLLSGSRPRPWAWFLGVCPRS*RGRSGD
Trigger: GTCCCCACTCCTTCCTCTGCATGACCTTGGGCAAAC...ACCTAGAAACCAAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR CCA 90 bp CCTGTAGCACAAGAGCTGGCCCAGGAGGAGGCTGAAGATGTGTTTCTAGTTCCTCTGGGGAGGGAGCACTaGGATTTGAGCTCCAGATTT +
Preference number: 2 (lower is better)
Translates to: PVAQELAQEEAEDVFLVPLGREH*DLSSRF
Trigger: AAATCTGGAGCTCAAATCCCAGTGCTCCCTCCCCAG...AGGAACTAGAAACACATCTTCAGCCTCCTCCTGGGCCAGCTCTTGTGCTACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR TCA 90 bp TCATCCTGGCGAGAAGAGGAATCTGATCCAAAGCCCTCATGGCAGAGAGGCAGGAGTTTTGGGAGGACTTaGGGAATGCTGGTATCTTGG +
Preference number: 2 (lower is better)
Translates to: SSWREEESDPKPSWQRGRSFGRT*GMLVSW
Trigger: CCAAGATACCAGCATTCCTCAAGTCCTCCCAAAACT...CCTGCCTCTCTGCCATGAGGGCTTTGGATCAGATTCCTCTTCTCGCCAGGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR CCA 90 bp AGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGGTTTCTAGGTGATTTGACCTGGAGTTaGGCTCTAAAGGGACCCTGC +
Preference number: 2 (lower is better)
Translates to: RAHLLSGSRPRPWAWFLGDLTWS*ALKGPC
Trigger: GCAGGGTCCCTTTAGAGCCCAACTCCAGGTCAAATC...ACCTAGAAACCAAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR CCA 90 bp TGCTCTCCAGCTGCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCGTGGGTAGGAAGTTTTaGGAGGACTTGAGGAATGCT +
Preference number: 2 (lower is better)
Translates to: CSPAASELPLVVQKRDDAVGRKF*EDLRNA
Trigger: AGCATTCCTCAAGTCCTCCCAAAACTTCCTACCCAC...GGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGCAGCTGGAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR TCA 90 bp GCAGGTAGAAGACACACTGTGAGAGGCAAACGTCTTCACTCATCCTGCAGGGAAAAGTTGGGGAAACACTaGGAGGGGGTTATGGTGAGA +
Preference number: 2 (lower is better)
Translates to: AGRRHTVRGKRLHSSCREKLGKH*EGVMVR
Trigger: TCTCACCATAACCCCCTCTCAGTGTTTCCCCAACTT...TTCCCTGCAGGATGAGTGAAGACGTTTGCCTCTCACAGTGTGTCTTCTACCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR TCA 90 bp GCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGGGAGGGACCCATTCGAGCTaGATGACCCCCACCCCTTCA +
Preference number: 2 (lower is better)
Translates to: ALRDHLNPYPKYIQSHLGGTHSS*MTPTPS
Trigger: TGAAGGGGTGGGGGTCATTCAGCTCGAATGGGTCCC...TCCCAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR CCA 90 bp CCGGCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGGTATCTTGGAAGAGTTaGGGCCCCACTCCTGGGGAG +
Preference number: 2 (lower is better)
Translates to: PALRDHLNPYPKYIQSHLVSWKS*GPTPGE
Trigger: CTCCCCAGGAGTGGGGCCCCAACTCTTCCAAGATAC...CAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR CCA 90 bp AGTCTCCTCCAACCTGAGACCGTTTCTTGTCCTTTCCTTGTCTTTCGTGACCTGGTGCCAGCCTTCATTTaGTTAAGGTGGTGTCTGCCA +
Preference number: 2 (lower is better)
Translates to: SLLQPETVSCPFLVFRDLVPAFI*LRWCLP
Trigger: TGGCAGACACCACCTTAACCAAATGAAGGCTGGCAC...CAGGTCACGAAAGACAAGGAAAGGACAAGAAACGGTCTCAGGTTGGAGGAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608736.1
3UTR-3UTR TCA 90 bp GCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGGGAGGAGTGGGGACGGGTTaGAGGAGATGTTTTCTGCCC +
Preference number: 2 (lower is better)
Translates to: ALRDHLNPYPKYIQSHLGGVGTG*RRCFLP
Trigger: GGGCAGAAAACATCTCCTTCAACCCGTCCCCACTCC...TCCCAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR TCA 90 bp GCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGGGACAGGAGCTGATGGCTTaGAAGGGCAAGGGTTTGCCC +
Preference number: 2 (lower is better)
Translates to: ALRDHLNPYPKYIQSHLGQELMA*KGKGLP
Trigger: GGGCAAACCCTTGCCCTTTCAAGCCATCAGCTCCTG...TCCCAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR TCA 90 bp GCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGGGAGGCCCAGGAGGAGGCTaGAGATGTGTTTCTAGTTCC +
Preference number: 2 (lower is better)
Translates to: ALRDHLNPYPKYIQSHLGGPGGG*RCVSSS
Trigger: GGAACTAGAAACACATCTTCAGCCTCCTCCTGGGCC...TCCCAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
3UTR-3UTR CCA 90 bp CCGGCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGGGAATGCTGGTATCTTaGAAGAGTTGGGGCCCCACT +
Preference number: 2 (lower is better)
Translates to: PALRDHLNPYPKYIQSHLGMLVS*KSWGPT
Trigger: AGTGGGGCCCCAACTCTTCCAAGATACCAGCATTCC...CAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR CCA 90 bp CCGGCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGATGCAGAGGAAGGAGTaGGGACGGGTTGAAGGAGAT +
Preference number: 2 (lower is better)
Translates to: PALRDHLNPYPKYIQSHLMQRKE*GRVEGD
Trigger: ATCTCCTTCAACCCGTCCCCACTCCTTCCTCTGCAT...CAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR TCA 90 bp GCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGGGAGCGAGAAGAGGAATCTaGTCCAAAGCCCTCATGGCA +
Preference number: 2 (lower is better)
Translates to: ALRDHLNPYPKYIQSHLGARRGI*SKALMA
Trigger: TGCCATGAGGGCTTTGGATCAGATTCCTCTTCTCGC...TCCCAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR GCA 90 bp GCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGGGAGAAAGGGCAAGGGTTTaGCCAAGGTCATGCAGAGGA +
Preference number: 2 (lower is better)
Translates to: ALRDHLNPYPKYIQSHLGERARV*PRSCRG
Trigger: TCCTCTGCATGACCTTGGGCAAACCCTTGCCCTTTC...TCCCAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR GCA 90 bp GCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGGGACGTCTTCACTCATCCTaGAGGGAAAGGCCAAGTGAG +
Preference number: 2 (lower is better)
Translates to: ALRDHLNPYPKYIQSHLGRLHSS*RERPSE
Trigger: CTCACTTGGCCTTTCCCTGCAGGATGAGTGAAGACG...TCCCAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR CCA 90 bp GCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGGGACTTCATCTGTGTCTATaGAGGGCAGTGCGTGTCCTC +
Preference number: 2 (lower is better)
Translates to: ALRDHLNPYPKYIQSHLGLHLCL*RAVRVL
Trigger: GAGGACACGCACTGCCCTCCATAGACACAGATGAAG...TCCCAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR CCA 90 bp GCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGGGATGCGTGTCCTCATCCTaGCGAGAAGAGGAATCTGAT +
Preference number: 2 (lower is better)
Translates to: ALRDHLNPYPKYIQSHLGCVSSS*REEESD
Trigger: ATCAGATTCCTCTTCTCGCCAGGATGAGGACACGCA...TCCCAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR CAA 90 bp AGACCGTTTCTTGTCCTTTCCTTGTCTTTCGTGACCTGGACACATTaGAAGAGTGCTGGTCAGATCTTTTGTAGAATGGGTCTTCTCATG +
Preference number: 2 (lower is better)
Translates to: RPFLVLSLSFVTWTH*KSAGQIFCRMGLLM
Trigger: CATGAGAAGACCCATTCTACAAAAGATCTGACCAGCACTCTTCAAATGTGTCCAGGTCACGAAAGACAAGGAAAGGACAAGAAACGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608736.1
3UTR-3UTR CCA 90 bp GCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGGGAGGACTTGAGGAATGCTaGTATCTTGGAAGAGTTGGG +
Preference number: 2 (lower is better)
Translates to: ALRDHLNPYPKYIQSHLGGLEEC*YLGRVG
Trigger: CCCAACTCTTCCAAGATACCAGCATTCCTCAAGTCC...TCCCAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR CCA 90 bp GCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGGGAGTGGGTAGGAAGTTTTaGGAGGACTTGAGGAATGCT +
Preference number: 2 (lower is better)
Translates to: ALRDHLNPYPKYIQSHLGVGRKF*EDLRNA
Trigger: AGCATTCCTCAAGTCCTCCCAAAACTTCCTACCCAC...TCCCAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR GCA 90 bp GCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGGGATGTGTTTCTAGTTCCTaGATGCTGCTTTGTTGTGTG +
Preference number: 2 (lower is better)
Translates to: ALRDHLNPYPKYIQSHLGCVSSS*MLLCCV
Trigger: CACACAACAAAGCAGCATGCAGGAACTAGAAACACA...TCCCAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
3UTR-3UTR CCA 90 bp TGGTTAAGGTGGTGTCTGCCAGATTTTTCCACTGTGAAGTCACTGTTTTTGCCTTTCATTTGGTTAAGGTaGTGTCTGCCAGATTTTTCC +
Preference number: 2 (lower is better)
Translates to: WLRWCLPDFSTVKSLFLPFIWLR*CLPDFS
Trigger: GGAAAAATCTGGCAGACACCACCTTAACCAAATGAA...AGGCAAAAACAGTGACTTCACAGTGGAAAAATCTGGCAGACACCACCTTAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000608467.5
ENST00000608736.1
3UTR-3UTR TCA 90 bp TGGACACATTTGAAGAGTGCTGGTCAGATCTTTTGTAGAATGGGTCTTCTCATGCAGATTTTTCCACTGTaGAGTCACTGTTTTTGCCTT +
Preference number: 2 (lower is better)
Translates to: WTHLKSAGQIFCRMGLLMQIFPL*SHCFCL
Trigger: AAGGCAAAAACAGTGACTTCACAGTGGAAAAATCTG...CATGAGAAGACCCATTCTACAAAAGATCTGACCAGCACTCTTCAAATGTGTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000608736.1
3UTR-3UTR CCA 90 bp ACACATTTGAAGAGTGCTGGTCAGATCTTTTGTAGAATGGGTCTTCTCATGATTTTCATTTGGTTAAGGTaGTGTCTGCCAGATTTTTCC +
Preference number: 2 (lower is better)
Translates to: THLKSAGQIFCRMGLLMIFIWLR*CLPDFS
Trigger: GGAAAAATCTGGCAGACACCACCTTAACCAAATGAA...AATCATGAGAAGACCCATTCTACAAAAGATCTGACCAGCACTCTTCAAATGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000608736.1
3UTR TCA 72 bp ACAAGGACAGTAGGGTGTGCCCTGGTGGGGGCCGCCTaGGGATCCCCTAGGAGGCCCTTCAGGCTGGTGGAG +
Preference number: 3 (lower is better)
Translates to: TRTVGCALVGAA*GSPRRPFRLVE
Trigger: CTCCACCAGCCTGAAGGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCAGGGCACACCCTACTGTCCTTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
3UTR CCA 72 bp CCTGAGGACCCTCAGGGAACCAGGAAGGTGAGGGGCTaGCTCCGCCCCACCTGTAGCACAAGAGCTGGCCCA +
Preference number: 3 (lower is better)
Translates to: PEDPQGTRKVRG*LRPTCSTRAGP
Trigger: TGGGCCAGCTCTTGTGCTACAGGTGGGGCGGAGCCAGCCCCTCACCTTCCTGGTTCCCTGAGGGTCCTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
3UTR-3UTR CAA 90 bp TGGTGGGGGCCGCCTGAGGATCCCCTAGGAGGCCCTTCAGGCTGGTGGAGACTGAGATTTGACCTGGAGTaGGGCTCTAAAGGGACCCTG +
Preference number: 3 (lower is better)
Translates to: WWGPPEDPLGGPSGWWRLRFDLE*GSKGTL
Trigger: CAGGGTCCCTTTAGAGCCCAACTCCAGGTCAAATCT...CAGTCTCCACCAGCCTGAAGGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR CAA 90 bp GCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCTCCGGCTGGGGAGCAGGAGCTGATGGCTaGAAAGGGCAAGGGTTTGCC +
Preference number: 3 (lower is better)
Translates to: ASELPLVVQKRDDASGWGAGADG*KGQGFA
Trigger: GGCAAACCCTTGCCCTTTCAAGCCATCAGCTCCTGC...TCCCCAGCCGGAGGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR CAA 90 bp GGCTTGAAAGGGCAAGGGTTTGCCCAAGGTCATGCAGAGGAAGGAGTGGGGACGAGGAATGCTGGTATCTaGGAAGAGTTGGGGCCCCAC +
Preference number: 3 (lower is better)
Translates to: GLKGQGFAQGHAEEGVGTRNAGI*EELGPH
Trigger: GTGGGGCCCCAACTCTTCCAAGATACCAGCATTCCT...CGTCCCCACTCCTTCCTCTGCATGACCTTGGGCAAACCCTTGCCCTTTCAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR CAA 90 bp GCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCTCCGGCTGGGGAAGGAATGCTGGTATCTaGGAAGAGTTGGGGCCCCAC +
Preference number: 3 (lower is better)
Translates to: ASELPLVVQKRDDASGWGRNAGI*EELGPH
Trigger: GTGGGGCCCCAACTCTTCCAAGATACCAGCATTCCT...TCCCCAGCCGGAGGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR CAA 90 bp GCGCCTCTGAGAGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGCAGGAGCTGATGGCTaGAAAGGGCAAGGGTTTGCC +
Preference number: 3 (lower is better)
Translates to: APLREPIYYQGHGQDRGLAGADG*KGQGFA
Trigger: GGCAAACCCTTGCCCTTTCAAGCCATCAGCTCCTGC...AAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCTCTCAGAGGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR CAA 90 bp GCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCTCCGGCTGGGGAAGGGAGCACTGGGATTaGAGCTCCAGATTTGACCTG +
Preference number: 3 (lower is better)
Translates to: ASELPLVVQKRDDASGWGREHWD*SSRFDL
Trigger: CAGGTCAAATCTGGAGCTCAAATCCCAGTGCTCCCT...TCCCCAGCCGGAGGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR CCA 72 bp TTCACTCATCCTGCAGGGAAAGGCCAAGTGAGCATCTaGGACCCATTCGAGCTGAATGACCCCCACCCCTTC +
Preference number: 3 (lower is better)
Translates to: FTHPAGKGQVSI*DPFELNDPHPF
Trigger: GAAGGGGTGGGGGTCATTCAGCTCGAATGGGTCCCAGATGCTCACTTGGCCTTTCCCTGCAGGATGAGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR CAA 90 bp GGGTTGAAGGAGATGTTTTCTGCCCCTGAGGGCCTTGGGAAGAGGGTGTGGGTAAGATTTGACCTGGAGTaGGGCTCTAAAGGGACCCTG +
Preference number: 3 (lower is better)
Translates to: GLKEMFSAPEGLGKRVWVRFDLE*GSKGTL
Trigger: CAGGGTCCCTTTAGAGCCCAACTCCAGGTCAAATCT...TACCCACACCCTCTTCCCAAGGCCCTCAGGGGCAGAAAACATCTCCTTCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR CAA 90 bp TCATCCTGGCGAGAAGAGGAATCTGATCCAAAGCCCTCATGGCAGAGAGGCAGGAGGGAGCACTGGGATTaGAGCTCCAGATTTGACCTG +
Preference number: 3 (lower is better)
Translates to: SSWREEESDPKPSWQRGRREHWD*SSRFDL
Trigger: CAGGTCAAATCTGGAGCTCAAATCCCAGTGCTCCCT...CCTGCCTCTCTGCCATGAGGGCTTTGGATCAGATTCCTCTTCTCGCCAGGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR CCA 72 bp ATCTGTGTCTATGGAGGGCAGTGCGTGTCCTCATCCTaGCGAGAAGAGGAATCTGATCCAAAGCCCTCATGG +
Preference number: 3 (lower is better)
Translates to: ICVYGGQCVSSS*REEESDPKPSW
Trigger: CCATGAGGGCTTTGGATCAGATTCCTCTTCTCGCCAGGATGAGGACACGCACTGCCCTCCATAGACACAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR CCA 72 bp TCACGGCCAAGACCGTGGGCTTGGTTTCTAGGTAGGTaGACTTTGAGGGGCAAAGACAACCCACTTTTCCTG +
Preference number: 3 (lower is better)
Translates to: SRPRPWAWFLGR*TLRGKDNPLFL
Trigger: CAGGAAAAGTGGGTTGTCTTTGCCCCTCAAAGTCCACCTACCTAGAAACCAAGCCCACGGTCTTGGCCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
3UTR CCA 72 bp AGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTaGGCTTGGTTTCTAGGTAGGTGGACTTTGAGGGGC +
Preference number: 3 (lower is better)
Translates to: RAHLLSGSRPRP*AWFLGRWTLRG
Trigger: GCCCCTCAAAGTCCACCTACCTAGAAACCAAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
3UTR-3UTR CAA 90 bp GCGCCTCTGAGAGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTAAGTTTTGGGAGGACTaGAGGAATGCTGGTATCTTG +
Preference number: 3 (lower is better)
Translates to: APLREPIYYQGHGQDRGLKFWED*RNAGIL
Trigger: CAAGATACCAGCATTCCTCAAGTCCTCCCAAAACTT...AAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCTCTCAGAGGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR CAA 90 bp TCATCCTGGCGAGAAGAGGAATCTGATCCAAAGCCCTCATGGCAGAGAGGCAGGAAGTTTTGGGAGGACTaGAGGAATGCTGGTATCTTG +
Preference number: 3 (lower is better)
Translates to: SSWREEESDPKPSWQRGRKFWED*RNAGIL
Trigger: CAAGATACCAGCATTCCTCAAGTCCTCCCAAAACTT...CCTGCCTCTCTGCCATGAGGGCTTTGGATCAGATTCCTCTTCTCGCCAGGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR TCA 72 bp GATGTGTTTCTAGTTCCTGCATGCTGCTTTGTTGTGTaGCCTCGGACATGTCACCTCCAGCCTTCTTCACCC +
Preference number: 3 (lower is better)
Translates to: DVFLVPACCFVV*PRTCHLQPSSP
Trigger: GGGTGAAGAAGGCTGGAGGTGACATGTCCGAGGTCACACAACAAAGCAGCATGCAGGAACTAGAAACACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
3UTR CCA 72 bp CATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTaGTTTCTAGGTAGGTGGACTTTGAGGGGCAAAGAC +
Preference number: 3 (lower is better)
Translates to: HLLSGSRPRPWA*FLGRWTLRGKD
Trigger: GTCTTTGCCCCTCAAAGTCCACCTACCTAGAAACCAAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
3UTR GCA 72 bp TTACGGATTTGGGGGAAGAATGCCACTCAGGCCAAGTaGCCTTCTCACCACATCATTTCAGAGGCTGTGATA +
Preference number: 3 (lower is better)
Translates to: LRIWGKNATQAK*PSHHIISEAVI
Trigger: TATCACAGCCTCTGAAATGATGTGGTGAGAAGGGCACTTGGCCTGAGTGGCATTCTTCCCCCAAATCCGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608736.1
3UTR-3UTR CAA 90 bp AGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGGTTTCTAGGTAAGTTTTGGGAGGACTaGAGGAATGCTGGTATCTTG +
Preference number: 3 (lower is better)
Translates to: RAHLLSGSRPRPWAWFLGKFWED*RNAGIL
Trigger: CAAGATACCAGCATTCCTCAAGTCCTCCCAAAACTT...ACCTAGAAACCAAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR CAA 90 bp ACGTTACGGATTTGGGGGAAGAATGCCACTCAGGCCAAGTGCCCTTCTCACCACGTGAAGTCACTGTTTTaGCCTTTCCACATTCTACTT +
Preference number: 3 (lower is better)
Translates to: TLRIWGKNATQAKCPSHHVKSLF*PFHILL
Trigger: AAGTAGAATGTGGAAAGGCAAAAACAGTGACTTCAC...GTGGTGAGAAGGGCACTTGGCCTGAGTGGCATTCTTCCCCCAAATCCGTAACGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608736.1
3UTR-3UTR CAA 90 bp CCGGCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGAGATTTGACCTGGAGTaGGGCTCTAAAGGGACCCTG +
Preference number: 3 (lower is better)
Translates to: PALRDHLNPYPKYIQSHLRFDLE*GSKGTL
Trigger: CAGGGTCCCTTTAGAGCCCAACTCCAGGTCAAATCT...CAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR-3UTR CAA 90 bp GCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGGGAAGGAATGCTGGTATCTaGGAAGAGTTGGGGCCCCAC +
Preference number: 3 (lower is better)
Translates to: ALRDHLNPYPKYIQSHLGRNAGI*EELGPH
Trigger: GTGGGGCCCCAACTCTTCCAAGATACCAGCATTCCT...TCCCAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
3UTR CCA 72 bp AGACCGTTTCTTGTCCTTTCCTTGTCTTTCGTGACCTaGACACATTTGAAGAGTGCTGGTCAGATCTTTTGT +
Preference number: 3 (lower is better)
Translates to: RPFLVLSLSFVT*THLKSAGQIFC
Trigger: ACAAAAGATCTGACCAGCACTCTTCAAATGTGTCCAGGTCACGAAAGACAAGGAAAGGACAAGAAACGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608736.1
CDS-3UTR TCA 90 bp TGGTGGGGGCCGCCTGAGGATCCCCTAGGAGGCCCTTCAGGCTGGTGGAGACTGCTGGTGGGGGCCGCCTaGGGATCCCCTAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: WWGPPEDPLGGPSGWWRLLVGAA*GSPRRP
Trigger: GGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCAG...CAGTCTCCACCAGCCTGAAGGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR TCA 90 bp TGGTGGGGGCCGCCTGAGGATCCCCTAGGAGGCCCTTCAGGCTGGTGGAGACTGAGGGAACCAGGAAGGTaGGGGGCTGGCTCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: WWGPPEDPLGGPSGWWRLREPGR*GAGSAP
Trigger: TGGGGCGGAGCCAGCCCCTCACCTTCCTGGTTCCCT...CAGTCTCCACCAGCCTGAAGGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR GCA 90 bp TGGTGGGGGCCGCCTGAGGATCCCCTAGGAGGCCCTTCAGGCTGGTGGAGACTGGGCCGCGGCTGCAGCTaGAGGAACGATTGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: WWGPPEDPLGGPSGWWRLGRGCS*RNDCSS
Trigger: CGAGCTGCAATCGTTCCTGCAGCTGCAGCCGCGGCC...CAGTCTCCACCAGCCTGAAGGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp TGGTGGGGGCCGCCTGAGGATCCCCTAGGAGGCCCTTCAGGCTGGTGGAGACTGCCACACAGAGCGCTGTaGCTGCCAGGCGACAGGTGC +
Preference number: 4 (lower is better)
Translates to: WWGPPEDPLGGPSGWWRLPHRAL*LPGDRC
Trigger: GCACCTGTCGCCTGGCAGGCACAGCGCTCTGTGTGG...CAGTCTCCACCAGCCTGAAGGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp TGGTGGGGGCCGCCTGAGGATCCCCTAGGAGGCCCTTCAGGCTGGTGGAGACTGAAGGACAGTAGGGTGTaGCCTGGTGGGGGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: WWGPPEDPLGGPSGWWRLKDSRV*PGGGRL
Trigger: CAGGCGGCCCCCACCAGGGCACACCCTACTGTCCTT...CAGTCTCCACCAGCCTGAAGGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR TCA 90 bp TGGTGGGGGCCGCCTGAGGATCCCCTAGGAGGCCCTTCAGGCTGGTGGAGACTGGGTACAGAAGAGAGATaGCGCCTCCGGCTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: WWGPPEDPLGGPSGWWRLGTEER*RLRLGR
Trigger: CCTCCCCAGCCGGAGGCGTCATCTCTCTTCTGTACC...CAGTCTCCACCAGCCTGAAGGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR GCA 90 bp TGGTGGGGGCCGCCTGAGGATCCCCTAGGAGGCCCTTCAGGCTGGTGGAGACTGGGGGTCCAAGGGCTCTaGCTTGGTGTCCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: WWGPPEDPLGGPSGWWRLGVQGL*LGVLAQ
Trigger: CTGAGCCAGGACACCAAGGCAGAGCCCTTGGACCCC...CAGTCTCCACCAGCCTGAAGGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp TGGTGGGGGCCGCCTGAGGATCCCCTAGGAGGCCCTTCAGGCTGGTGGAGACTGCTGTGGTGGGTGGGCTaGGGGGCTCTGATGCCAAAA +
Preference number: 4 (lower is better)
Translates to: WWGPPEDPLGGPSGWWRLLWWVG*GALMPK
Trigger: TTTTGGCATCAGAGCCCCCCAGCCCACCCACCACAG...CAGTCTCCACCAGCCTGAAGGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR TCA 90 bp TGGTGGGGGCCGCCTGAGGATCCCCTAGGAGGCCCTTCAGGCTGGTGGAGACTGGGAGTGGGGACGGGTTaGAGGAGATGTTTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: WWGPPEDPLGGPSGWWRLGVGTG*RRCFLP
Trigger: GGGCAGAAAACATCTCCTTCAACCCGTCCCCACTCC...CAGTCTCCACCAGCCTGAAGGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp TGGTGGGGGCCGCCTGAGGATCCCCTAGGAGGCCCTTCAGGCTGGTGGAGACTGCAGGAGCTGATGGCTTaGAAGGGCAAGGGTTTGCCC +
Preference number: 4 (lower is better)
Translates to: WWGPPEDPLGGPSGWWRLQELMA*KGKGLP
Trigger: GGGCAAACCCTTGCCCTTTCAAGCCATCAGCTCCTG...CAGTCTCCACCAGCCTGAAGGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp GCGCCTCTGAGAGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTCTGGTGGGGGCCGCCTaGGGATCCCCTAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: APLREPIYYQGHGQDRGLLVGAA*GSPRRP
Trigger: GGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCAG...AAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCTCTCAGAGGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR TCA 90 bp CACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGGGCTGGCTGGTGGGGGCCGCCTaGGGATCCCCTAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: HPPHLSTRASNCLWWVGWLVGAA*GSPRRP
Trigger: GGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCAG...CCAGCCCACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR CCA 90 bp TGGTGGGGGCCGCCTGAGGATCCCCTAGGAGGCCCTTCAGGCTGGTGGAGACTGATATCCAGAGCCACCTaGGACCATCAGGCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: WWGPPEDPLGGPSGWWRLISRAT*DHQASG
Trigger: GCCAGAGGCCTGATGGTCCCAGGTGGCTCTGGATAT...CAGTCTCCACCAGCCTGAAGGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR TCA 90 bp GCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCTCCGGCTGGGGAGATCTTCCAACACAGTaGGGGCCAGGGCCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: ASELPLVVQKRDDASGWGDLPTQ*GPGPAG
Trigger: CCCCGCCGGCCCTGGCCCTCACTGTGTTGGAAGATC...TCCCCAGCCGGAGGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR GCA 90 bp TGGTGGGGGCCGCCTGAGGATCCCCTAGGAGGCCCTTCAGGCTGGTGGAGACTGAGCTGCAGGAACGATTaGAGCTCGGCATCATGGACC +
Preference number: 4 (lower is better)
Translates to: WWGPPEDPLGGPSGWWRLSCRND*SSASWT
Trigger: GGTCCATGATGCCGAGCTGCAATCGTTCCTGCAGCT...CAGTCTCCACCAGCCTGAAGGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp AGGCCTCTGGCTAGTCTTTCTGGGCCAAACCTGTCCTCCACCCTGAGGACCCTCCCACACAGAGCGCTGTaGCTGCCAGGCGACAGGTGC +
Preference number: 4 (lower is better)
Translates to: RPLASLSGPNLSSTLRTLPHRAL*LPGDRC
Trigger: GCACCTGTCGCCTGGCAGGCACAGCGCTCTGTGTGG...GAGGGTCCTCAGGGTGGAGGACAGGTTTGGCCCAGAAAGACTAGCCAGAGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp TGGTGGGGGCCGCCTGAGGATCCCCTAGGAGGCCCTTCAGGCTGGTGGAGACTGTCTGCCTTGGTGTCCTaGCTCAGCCAGCCTATCATG +
Preference number: 4 (lower is better)
Translates to: WWGPPEDPLGGPSGWWRLSALVS*LSQPIM
Trigger: CATGATAGGCTGGCTGAGCCAGGACACCAAGGCAGA...CAGTCTCCACCAGCCTGAAGGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp TGGTGGGGGCCGCCTGAGGATCCCCTAGGAGGCCCTTCAGGCTGGTGGAGACTGTCACGGCCAAGACCGTaGGCTTGGTTTCTAGGTAGG +
Preference number: 4 (lower is better)
Translates to: WWGPPEDPLGGPSGWWRLSRPRP*AWFLGR
Trigger: CCTACCTAGAAACCAAGCCCACGGTCTTGGCCGTGA...CAGTCTCCACCAGCCTGAAGGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR TCA 90 bp GGGTTGAAGGAGATGTTTTCTGCCCCTGAGGGCCTTGGGAAGAGGGTGTGGGTAGAGGGGCGAGAGCCTTaGGCGCTGCTCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GLKEMFSAPEGLGKRVWVEGREP*ALLSSC
Trigger: GCAGCTGGAGAGCAGCGCTCAAGGCTCTCGCCCCTC...TACCCACACCCTCTTCCCAAGGCCCTCAGGGGCAGAAAACATCTCCTTCAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp GGCTTGAAAGGGCAAGGGTTTGCCCAAGGTCATGCAGAGGAAGGAGTGGGGACGGGCCGCGGCTGCAGCTaGAGGAACGATTGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: GLKGQGFAQGHAEEGVGTGRGCS*RNDCSS
Trigger: CGAGCTGCAATCGTTCCTGCAGCTGCAGCCGCGGCC...CGTCCCCACTCCTTCCTCTGCATGACCTTGGGCAAACCCTTGCCCTTTCAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp TGGTGGGGGCCGCCTGAGGATCCCCTAGGAGGCCCTTCAGGCTGGTGGAGACTGGCTGAGAGCAGTGCCTaGACAGTCCTCATAGAAGAG +
Preference number: 4 (lower is better)
Translates to: WWGPPEDPLGGPSGWWRLAESSA*TVLIEE
Trigger: CTCTTCTATGAGGACTGTGCAGGCACTGCTCTCAGC...CAGTCTCCACCAGCCTGAAGGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR GCA 90 bp TGGTGGGGGCCGCCTGAGGATCCCCTAGGAGGCCCTTCAGGCTGGTGGAGACTGAAAATGGGTGACAACTaGTGCTCTGGCTCATCCCCG +
Preference number: 4 (lower is better)
Translates to: WWGPPEDPLGGPSGWWRLKMGDN*CSGSSP
Trigger: CGGGGATGAGCCAGAGCAGCAGTTGTCACCCATTTT...CAGTCTCCACCAGCCTGAAGGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp GGCTTGAAAGGGCAAGGGTTTGCCCAAGGTCATGCAGAGGAAGGAGTGGGGACGGGACCCCTGGGACTGTaGGCTCTGGAGCCTGACCAC +
Preference number: 4 (lower is better)
Translates to: GLKGQGFAQGHAEEGVGTGPLGL*ALEPDH
Trigger: GTGGTCAGGCTCCAGAGCCCACAGTCCCAGGGGTCC...CGTCCCCACTCCTTCCTCTGCATGACCTTGGGCAAACCCTTGCCCTTTCAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382285.7
ENST00000382291.7
CDS-3UTR CCA 90 bp GGCTTGAAAGGGCAAGGGTTTGCCCAAGGTCATGCAGAGGAAGGAGTGGGGACGCCGAAGACCTCCACGTaGCTGTCGGCTTCGGGGTCC +
Preference number: 4 (lower is better)
Translates to: GLKGQGFAQGHAEEGVGTPKTST*LSASGS
Trigger: GGACCCCGAAGCCGACAGCCACGTGGAGGTCTTCGG...CGTCCCCACTCCTTCCTCTGCATGACCTTGGGCAAACCCTTGCCCTTTCAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp TGGTGGGGGCCGCCTGAGGATCCCCTAGGAGGCCCTTCAGGCTGGTGGAGACTGACCATGACTGGCCACTaGCATTGCGGAAAATGGGTG +
Preference number: 4 (lower is better)
Translates to: WWGPPEDPLGGPSGWWRLTMTGH*HCGKWV
Trigger: CACCCATTTTCCGCAATGCCAGTGGCCAGTCATGGT...CAGTCTCCACCAGCCTGAAGGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp GCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCTCCGGCTGGGGAAGGAAGGTGAGGGGCTaGCTCCGCCCCACCTGTAGC +
Preference number: 4 (lower is better)
Translates to: ASELPLVVQKRDDASGWGRKVRG*LRPTCS
Trigger: GCTACAGGTGGGGCGGAGCCAGCCCCTCACCTTCCT...TCCCCAGCCGGAGGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR TCA 90 bp TGGTGGGGGCCGCCTGAGGATCCCCTAGGAGGCCCTTCAGGCTGGTGGAGACTGAAGTTGGGGAAACACTaGGAGGGGGTTATGGTGAGA +
Preference number: 4 (lower is better)
Translates to: WWGPPEDPLGGPSGWWRLKLGKH*EGVMVR
Trigger: TCTCACCATAACCCCCTCTCAGTGTTTCCCCAACTT...CAGTCTCCACCAGCCTGAAGGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp AGGCCTCTGGCTAGTCTTTCTGGGCCAAACCTGTCCTCCACCCTGAGGACCCTCGGGACCCATTCGAGCTaGATGACCCCCACCCCTTCA +
Preference number: 4 (lower is better)
Translates to: RPLASLSGPNLSSTLRTLGTHSS*MTPTPS
Trigger: TGAAGGGGTGGGGGTCATTCAGCTCGAATGGGTCCC...GAGGGTCCTCAGGGTGGAGGACAGGTTTGGCCCAGAAAGACTAGCCAGAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp TCATCCTGGCGAGAAGAGGAATCTGATCCAAAGCCCTCATGGCAGAGAGGCAGGAGGGAACCAGGAAGGTaGGGGGCTGGCTCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: SSWREEESDPKPSWQRGRREPGR*GAGSAP
Trigger: TGGGGCGGAGCCAGCCCCTCACCTTCCTGGTTCCCT...CCTGCCTCTCTGCCATGAGGGCTTTGGATCAGATTCCTCTTCTCGCCAGGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp GGCTTGAAAGGGCAAGGGTTTGCCCAAGGTCATGCAGAGGAAGGAGTGGGGACGGGTACAGAAGAGAGATaGCGCCTCCGGCTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GLKGQGFAQGHAEEGVGTGTEER*RLRLGR
Trigger: CCTCCCCAGCCGGAGGCGTCATCTCTCTTCTGTACC...CGTCCCCACTCCTTCCTCTGCATGACCTTGGGCAAACCCTTGCCCTTTCAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp TGCTCTCCAGCTGCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCGAGGGGCGAGAGCCTTaGGCGCTGCTCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: CSPAASELPLVVQKRDDAEGREP*ALLSSC
Trigger: GCAGCTGGAGAGCAGCGCTCAAGGCTCTCGCCCCTC...GGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGCAGCTGGAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR TCA 90 bp CTTCTTCACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGCTGGTGGGGGCCGCCTaGGGATCCCCTAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: LLHPPHLSTRASNCLWWVLVGAA*GSPRRP
Trigger: GGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCAG...CACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTGAAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR GCA 90 bp TGCTCTCCAGCTGCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCCGCTGGGGCCGCGGCTaGAGCTGCAGGAACGATTGC +
Preference number: 4 (lower is better)
Translates to: CSPAASELPLVVQKRDDARWGRG*SCRNDC
Trigger: GCAATCGTTCCTGCAGCTGCAGCCGCGGCCCCAGCG...GGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGCAGCTGGAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp GCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCTCCGGCTGGGGAGGACCCCATACCACTTaGCATCCTCCACGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: ASELPLVVQKRDDASGWGGPHTT*HPPRWG
Trigger: GCCCCAGCGTGGAGGATGGCAAGTGGTATGGGGTCC...TCCCCAGCCGGAGGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp GGCTTGAAAGGGCAAGGGTTTGCCCAAGGTCATGCAGAGGAAGGAGTGGGGACGGGACCCCATACCACTTaGCATCCTCCACGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GLKGQGFAQGHAEEGVGTGPHTT*HPPRWG
Trigger: GCCCCAGCGTGGAGGATGGCAAGTGGTATGGGGTCC...CGTCCCCACTCCTTCCTCTGCATGACCTTGGGCAAACCCTTGCCCTTTCAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp GCGCCTCTGAGAGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTAAGGACAGTAGGGTGTaGCCTGGTGGGGGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: APLREPIYYQGHGQDRGLKDSRV*PGGGRL
Trigger: CAGGCGGCCCCCACCAGGGCACACCCTACTGTCCTT...AAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCTCTCAGAGGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR CCA 90 bp GCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCTCCGGCTGGGGAGGCATCATGGACCCCTaGGACTGTGGGCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: ASELPLVVQKRDDASGWGGIMDP*DCGLWS
Trigger: GCTCCAGAGCCCACAGTCCCAGGGGTCCATGATGCC...TCCCCAGCCGGAGGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382285.7
ENST00000382291.7
CDS-3UTR CCA 90 bp CCTGTAGCACAAGAGCTGGCCCAGGAGGAGGCTGAAGATGTGTTTCTAGTTCCTTGCCATCCTCCACGCTaGGGCCGCGGCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PVAQELAQEEAEDVFLVPCHPPR*GRGCSC
Trigger: GCAGCTGCAGCCGCGGCCCCAGCGTGGAGGATGGCA...AGGAACTAGAAACACATCTTCAGCCTCCTCCTGGGCCAGCTCTTGTGCTACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp AGGCCTCTGGCTAGTCTTTCTGGGCCAAACCTGTCCTCCACCCTGAGGACCCTCGCACTGCATAGCCAGTaGTCAGAGCCGCCACACCCA +
Preference number: 4 (lower is better)
Translates to: RPLASLSGPNLSSTLRTLALHSQ*SEPPHP
Trigger: TGGGTGTGGCGGCTCTGACCACTGGCTATGCAGTGC...GAGGGTCCTCAGGGTGGAGGACAGGTTTGGCCCAGAAAGACTAGCCAGAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR CCA 90 bp TGGTGGGGGCCGCCTGAGGATCCCCTAGGAGGCCCTTCAGGCTGGTGGAGACTGTGGCATTGCGGAAAATaGGTGACAACTGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: WWGPPEDPLGGPSGWWRLWHCGK*VTTAAL
Trigger: CAGAGCAGCAGTTGTCACCCATTTTCCGCAATGCCA...CAGTCTCCACCAGCCTGAAGGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp GCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCTCCGGCTGGGGATTGGGGCCCCACTCCTaGGGAGGGAGCACTGGGATT +
Preference number: 4 (lower is better)
Translates to: ASELPLVVQKRDDASGWGLGPHS*GGSTGI
Trigger: AATCCCAGTGCTCCCTCCCCAGGAGTGGGGCCCCAA...TCCCCAGCCGGAGGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp GGGTTGAAGGAGATGTTTTCTGCCCCTGAGGGCCTTGGGAAGAGGGTGTGGGTAAGGAAGGTGAGGGGCTaGCTCCGCCCCACCTGTAGC +
Preference number: 4 (lower is better)
Translates to: GLKEMFSAPEGLGKRVWVRKVRG*LRPTCS
Trigger: GCTACAGGTGGGGCGGAGCCAGCCCCTCACCTTCCT...TACCCACACCCTCTTCCCAAGGCCCTCAGGGGCAGAAAACATCTCCTTCAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp CCTGTAGCACAAGAGCTGGCCCAGGAGGAGGCTGAAGATGTGTTTCTAGTTCCTGATCTTCCAACACAGTaGGGGCCAGGGCCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: PVAQELAQEEAEDVFLVPDLPTQ*GPGPAG
Trigger: CCCCGCCGGCCCTGGCCCTCACTGTGTTGGAAGATC...AGGAACTAGAAACACATCTTCAGCCTCCTCCTGGGCCAGCTCTTGTGCTACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR TCA 90 bp AGGCCTCTGGCTAGTCTTTCTGGGCCAAACCTGTCCTCCACCCTGAGGACCCTCCAGAGAGGCAGGAGCTaGTGGCTTGAAAGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: RPLASLSGPNLSSTLRTLQRGRS*WLERAR
Trigger: CCTTGCCCTTTCAAGCCATCAGCTCCTGCCTCTCTG...GAGGGTCCTCAGGGTGGAGGACAGGTTTGGCCCAGAAAGACTAGCCAGAGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp GCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCTCCGGCTGGGGAGGGACCCATTCGAGCTaGATGACCCCCACCCCTTCA +
Preference number: 4 (lower is better)
Translates to: ASELPLVVQKRDDASGWGGTHSS*MTPTPS
Trigger: TGAAGGGGTGGGGGTCATTCAGCTCGAATGGGTCCC...TCCCCAGCCGGAGGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp AGGCCTCTGGCTAGTCTTTCTGGGCCAAACCTGTCCTCCACCCTGAGGACCCTCCAGGGAAAGGCCAAGTaGGCATCTGGGACCCATTCG +
Preference number: 4 (lower is better)
Translates to: RPLASLSGPNLSSTLRTLQGKAK*ASGTHS
Trigger: CGAATGGGTCCCAGATGCTCACTTGGCCTTTCCCTG...GAGGGTCCTCAGGGTGGAGGACAGGTTTGGCCCAGAAAGACTAGCCAGAGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp CCTGTAGCACAAGAGCTGGCCCAGGAGGAGGCTGAAGATGTGTTTCTAGTTCCTAGGGAACCAGGAAGGTaGGGGGCTGGCTCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: PVAQELAQEEAEDVFLVPREPGR*GAGSAP
Trigger: TGGGGCGGAGCCAGCCCCTCACCTTCCTGGTTCCCT...AGGAACTAGAAACACATCTTCAGCCTCCTCCTGGGCCAGCTCTTGTGCTACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR TCA 90 bp TCATCCTGGCGAGAAGAGGAATCTGATCCAAAGCCCTCATGGCAGAGAGGCAGGCCGCGCCACTCTTCCTaGCAGGACCACCGATGCCCT +
Preference number: 4 (lower is better)
Translates to: SSWREEESDPKPSWQRGRPRHSS*QDHRCP
Trigger: AGGGCATCGGTGGTCCTGTCAGGAAGAGTGGCGCGG...CCTGCCTCTCTGCCATGAGGGCTTTGGATCAGATTCCTCTTCTCGCCAGGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382285.7
CDS-3UTR GCA 90 bp AGGCCTCTGGCTAGTCTTTCTGGGCCAAACCTGTCCTCCACCCTGAGGACCCTCCCTCATCTCTCTGCCTaGTGTCTCCGCCGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: RPLASLSGPNLSSTLRTLPHLSA*CLRRAK
Trigger: CTTTGCTCGGCGGAGACAGCAGGCAGAGAGATGAGG...GAGGGTCCTCAGGGTGGAGGACAGGTTTGGCCCAGAAAGACTAGCCAGAGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382291.7
CDS-3UTR GCA 90 bp TGCTCTCCAGCTGCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCGGCCGCGGCTGCAGCTaGAGGAACGATTGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: CSPAASELPLVVQKRDDAGRGCS*RNDCSS
Trigger: CGAGCTGCAATCGTTCCTGCAGCTGCAGCCGCGGCC...GGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGCAGCTGGAGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp GCGCCTCTGAGAGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGGGGTCCAAGGGCTCTaGCTTGGTGTCCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: APLREPIYYQGHGQDRGLGVQGL*LGVLAQ
Trigger: CTGAGCCAGGACACCAAGGCAGAGCCCTTGGACCCC...AAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCTCTCAGAGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp TGCTCTCCAGCTGCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCAAGGACAGTAGGGTGTaGCCTGGTGGGGGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: CSPAASELPLVVQKRDDAKDSRV*PGGGRL
Trigger: CAGGCGGCCCCCACCAGGGCACACCCTACTGTCCTT...GGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGCAGCTGGAGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR CCA 90 bp CTTCTTCACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGTGCCATCCTCCACGCTaGGGCCGCGGCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LLHPPHLSTRASNCLWWVCHPPR*GRGCSC
Trigger: GCAGCTGCAGCCGCGGCCCCAGCGTGGAGGATGGCA...CACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTGAAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp GCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCTCCGGCTGGGGAGCACTGCATAGCCAGTaGTCAGAGCCGCCACACCCA +
Preference number: 4 (lower is better)
Translates to: ASELPLVVQKRDDASGWGALHSQ*SEPPHP
Trigger: TGGGTGTGGCGGCTCTGACCACTGGCTATGCAGTGC...TCCCCAGCCGGAGGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR CCA 90 bp TGGTGGGGGCCGCCTGAGGATCCCCTAGGAGGCCCTTCAGGCTGGTGGAGACTGGGACTTGAGGAATGCTaGTATCTTGGAAGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: WWGPPEDPLGGPSGWWRLGLEEC*YLGRVG
Trigger: CCCAACTCTTCCAAGATACCAGCATTCCTCAAGTCC...CAGTCTCCACCAGCCTGAAGGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp TGGTGGGGGCCGCCTGAGGATCCCCTAGGAGGCCCTTCAGGCTGGTGGAGACTGTGGTTTCTAGGTAGGTaGACTTTGAGGGGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: WWGPPEDPLGGPSGWWRLWFLGR*TLRGKD
Trigger: GTCTTTGCCCCTCAAAGTCCACCTACCTAGAAACCA...CAGTCTCCACCAGCCTGAAGGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR TCA 90 bp AGGCCTCTGGCTAGTCTTTCTGGGCCAAACCTGTCCTCCACCCTGAGGACCCTCGGCCCAGGAGGAGGCTaGAGATGTGTTTCTAGTTCC +
Preference number: 4 (lower is better)
Translates to: RPLASLSGPNLSSTLRTLGPGGG*RCVSSS
Trigger: GGAACTAGAAACACATCTTCAGCCTCCTCCTGGGCC...GAGGGTCCTCAGGGTGGAGGACAGGTTTGGCCCAGAAAGACTAGCCAGAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR TCA 90 bp TCATCCTGGCGAGAAGAGGAATCTGATCCAAAGCCCTCATGGCAGAGAGGCAGGGGTACAGAAGAGAGATaGCGCCTCCGGCTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SSWREEESDPKPSWQRGRGTEER*RLRLGR
Trigger: CCTCCCCAGCCGGAGGCGTCATCTCTCTTCTGTACC...CCTGCCTCTCTGCCATGAGGGCTTTGGATCAGATTCCTCTTCTCGCCAGGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp AGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGGTTTCTAGGTGAGGGGCGAGAGCCTTaGGCGCTGCTCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RAHLLSGSRPRPWAWFLGEGREP*ALLSSC
Trigger: GCAGCTGGAGAGCAGCGCTCAAGGCTCTCGCCCCTC...ACCTAGAAACCAAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR TCA 90 bp CTTCTTCACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGGAGGGGCGAGAGCCTTaGGCGCTGCTCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LLHPPHLSTRASNCLWWVEGREP*ALLSSC
Trigger: GCAGCTGGAGAGCAGCGCTCAAGGCTCTCGCCCCTC...CACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTGAAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR GCA 90 bp GCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCTCCGGCTGGGGACTGGTTGTAGTCGGCTaGCCGCTGATCCAACACCAG +
Preference number: 4 (lower is better)
Translates to: ASELPLVVQKRDDASGWGLVVVG*PLIQHQ
Trigger: CTGGTGTTGGATCAGCGGGCAGCCGACTACAACCAG...TCCCCAGCCGGAGGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp AGGCCTCTGGCTAGTCTTTCTGGGCCAAACCTGTCCTCCACCCTGAGGACCCTCATGGGTGACAACTGCTaGTCTGGCTCATCCCCGAAG +
Preference number: 4 (lower is better)
Translates to: RPLASLSGPNLSSTLRTLMGDNC*SGSSPK
Trigger: CTTCGGGGATGAGCCAGAGCAGCAGTTGTCACCCAT...GAGGGTCCTCAGGGTGGAGGACAGGTTTGGCCCAGAAAGACTAGCCAGAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp GGCTTGAAAGGGCAAGGGTTTGCCCAAGGTCATGCAGAGGAAGGAGTGGGGACGGTCTGCACAGAAGATTaGCCAAAGGGGCTGGCGGGT +
Preference number: 4 (lower is better)
Translates to: GLKGQGFAQGHAEEGVGTVCTED*PKGLAG
Trigger: ACCCGCCAGCCCCTTTGGGCAATCTTCTGTGCAGAC...CGTCCCCACTCCTTCCTCTGCATGACCTTGGGCAAACCCTTGCCCTTTCAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp AGGCCTCTGGCTAGTCTTTCTGGGCCAAACCTGTCCTCCACCCTGAGGACCCTCTCTGCCTTGGTGTCCTaGCTCAGCCAGCCTATCATG +
Preference number: 4 (lower is better)
Translates to: RPLASLSGPNLSSTLRTLSALVS*LSQPIM
Trigger: CATGATAGGCTGGCTGAGCCAGGACACCAAGGCAGA...GAGGGTCCTCAGGGTGGAGGACAGGTTTGGCCCAGAAAGACTAGCCAGAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp CCTGTAGCACAAGAGCTGGCCCAGGAGGAGGCTGAAGATGTGTTTCTAGTTCCTCCGAAGACCTCCACGTaGCTGTCGGCTTCGGGGTCC +
Preference number: 4 (lower is better)
Translates to: PVAQELAQEEAEDVFLVPPKTST*LSASGS
Trigger: GGACCCCGAAGCCGACAGCCACGTGGAGGTCTTCGG...AGGAACTAGAAACACATCTTCAGCCTCCTCCTGGGCCAGCTCTTGTGCTACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp GGCTTGAAAGGGCAAGGGTTTGCCCAAGGTCATGCAGAGGAAGGAGTGGGGACGGTATCTTGGAAGAGTTaGGGCCCCACTCCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: GLKGQGFAQGHAEEGVGTVSWKS*GPTPGE
Trigger: CTCCCCAGGAGTGGGGCCCCAACTCTTCCAAGATAC...CGTCCCCACTCCTTCCTCTGCATGACCTTGGGCAAACCCTTGCCCTTTCAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp GCGCCTCTGAGAGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTCTGTGGTGGGTGGGCTaGGGGGCTCTGATGCCAAAA +
Preference number: 4 (lower is better)
Translates to: APLREPIYYQGHGQDRGLLWWVG*GALMPK
Trigger: TTTTGGCATCAGAGCCCCCCAGCCCACCCACCACAG...AAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCTCTCAGAGGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR CCA 90 bp GCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGGTTTCTAGGTAGGAGGAAGGTGAGGGGCTaGCTCCGCCCCACCTGTAGC +
Preference number: 4 (lower is better)
Translates to: AHLLSGSRPRPWAWFLGRRKVRG*LRPTCS
Trigger: GCTACAGGTGGGGCGGAGCCAGCCCCTCACCTTCCT...CCTACCTAGAAACCAAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR CCA 90 bp GCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCTCCGGCTGGGGAATATCCAGAGCCACCTaGGACCATCAGGCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: ASELPLVVQKRDDASGWGISRAT*DHQASG
Trigger: GCCAGAGGCCTGATGGTCCCAGGTGGCTCTGGATAT...TCCCCAGCCGGAGGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR CCA 90 bp GCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCTCCGGCTGGGGAGGAGGCCCTTCAGGCTaGTGGAGACTGAAGGTAAGG +
Preference number: 4 (lower is better)
Translates to: ASELPLVVQKRDDASGWGGGPSG*WRLKVR
Trigger: CCTTACCTTCAGTCTCCACCAGCCTGAAGGGCCTCC...TCCCCAGCCGGAGGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR TCA 90 bp CCTGTAGCACAAGAGCTGGCCCAGGAGGAGGCTGAAGATGTGTTTCTAGTTCCTCCTCAGGGTCGTCGCTaGGAGCAGTGCCTGCACAGT +
Preference number: 4 (lower is better)
Translates to: PVAQELAQEEAEDVFLVPPQGRR*EQCLHS
Trigger: ACTGTGCAGGCACTGCTCTCAGCGACGACCCTGAGG...AGGAACTAGAAACACATCTTCAGCCTCCTCCTGGGCCAGCTCTTGTGCTACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR TCA 90 bp CACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGGGCTGGGGAGTGGGGACGGGTTaGAGGAGATGTTTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: HPPHLSTRASNCLWWVGWGVGTG*RRCFLP
Trigger: GGGCAGAAAACATCTCCTTCAACCCGTCCCCACTCC...CCAGCCCACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp AGGCCTCTGGCTAGTCTTTCTGGGCCAAACCTGTCCTCCACCCTGAGGACCCTCGCGAGAAGAGGAATCTaGTCCAAAGCCCTCATGGCA +
Preference number: 4 (lower is better)
Translates to: RPLASLSGPNLSSTLRTLARRGI*SKALMA
Trigger: TGCCATGAGGGCTTTGGATCAGATTCCTCTTCTCGC...GAGGGTCCTCAGGGTGGAGGACAGGTTTGGCCCAGAAAGACTAGCCAGAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp CACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGGGCTGGCCCATTCGAGCTGAATaGCCCCCACCCCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: HPPHLSTRASNCLWWVGWPIRAE*PPPLHL
Trigger: CAGATGAAGGGGTGGGGGTCATTCAGCTCGAATGGG...CCAGCCCACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp GCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCTCCGGCTGGGGAAGGGGCTGGCGCCTCTaGGAGAGCCCATTTATTATC +
Preference number: 4 (lower is better)
Translates to: ASELPLVVQKRDDASGWGRGWRL*ESPFII
Trigger: GATAATAAATGGGCTCTCTCAGAGGCGCCAGCCCCT...TCCCCAGCCGGAGGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR TCA 90 bp CCTGTAGCACAAGAGCTGGCCCAGGAGGAGGCTGAAGATGTGTTTCTAGTTCCTGGTACAGAAGAGAGATaGCGCCTCCGGCTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PVAQELAQEEAEDVFLVPGTEER*RLRLGR
Trigger: CCTCCCCAGCCGGAGGCGTCATCTCTCTTCTGTACC...AGGAACTAGAAACACATCTTCAGCCTCCTCCTGGGCCAGCTCTTGTGCTACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR GCA 90 bp GCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGGTTTCTAGGTAGGCTGCCAGGCGACAGGTaGCCAGGGCCTGGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: AHLLSGSRPRPWAWFLGRLPGDR*PGPGCS
Trigger: ACTACAACCAGGCCCTGGGCACCTGTCGCCTGGCAG...CCTACCTAGAAACCAAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp GCAGGTAGAAGACACACTGTGAGAGGCAAACGTCTTCACTCATCCTGCAGGGAACCACACAGAGCGCTGTaGCTGCCAGGCGACAGGTGC +
Preference number: 4 (lower is better)
Translates to: AGRRHTVRGKRLHSSCREPHRAL*LPGDRC
Trigger: GCACCTGTCGCCTGGCAGGCACAGCGCTCTGTGTGG...TTCCCTGCAGGATGAGTGAAGACGTTTGCCTCTCACAGTGTGTCTTCTACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp CCTGTAGCACAAGAGCTGGCCCAGGAGGAGGCTGAAGATGTGTTTCTAGTTCCTGGGGTCCAAGGGCTCTaGCTTGGTGTCCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PVAQELAQEEAEDVFLVPGVQGL*LGVLAQ
Trigger: CTGAGCCAGGACACCAAGGCAGAGCCCTTGGACCCC...AGGAACTAGAAACACATCTTCAGCCTCCTCCTGGGCCAGCTCTTGTGCTACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp GCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCTCCGGCTGGGGAATGGGTGACAACTGCTaGTCTGGCTCATCCCCGAAG +
Preference number: 4 (lower is better)
Translates to: ASELPLVVQKRDDASGWGMGDNC*SGSSPK
Trigger: CTTCGGGGATGAGCCAGAGCAGCAGTTGTCACCCAT...TCCCCAGCCGGAGGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp GGCTTGAAAGGGCAAGGGTTTGCCCAAGGTCATGCAGAGGAAGGAGTGGGGACGGTTTGCCCAAGGTCATaGAGAGGAAGGAGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: GLKGQGFAQGHAEEGVGTVCPRS*RGRSGD
Trigger: GTCCCCACTCCTTCCTCTGCATGACCTTGGGCAAAC...CGTCCCCACTCCTTCCTCTGCATGACCTTGGGCAAACCCTTGCCCTTTCAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp AGGCCTCTGGCTAGTCTTTCTGGGCCAAACCTGTCCTCCACCCTGAGGACCCTCGAAAGGGCAAGGGTTTaGCCAAGGTCATGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: RPLASLSGPNLSSTLRTLERARV*PRSCRG
Trigger: TCCTCTGCATGACCTTGGGCAAACCCTTGCCCTTTC...GAGGGTCCTCAGGGTGGAGGACAGGTTTGGCCCAGAAAGACTAGCCAGAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp AGGCCTCTGGCTAGTCTTTCTGGGCCAAACCTGTCCTCCACCCTGAGGACCCTCCGTCTTCACTCATCCTaGAGGGAAAGGCCAAGTGAG +
Preference number: 4 (lower is better)
Translates to: RPLASLSGPNLSSTLRTLRLHSS*RERPSE
Trigger: CTCACTTGGCCTTTCCCTGCAGGATGAGTGAAGACG...GAGGGTCCTCAGGGTGGAGGACAGGTTTGGCCCAGAAAGACTAGCCAGAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp CTTCTTCACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGAAGGACAGTAGGGTGTaGCCTGGTGGGGGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: LLHPPHLSTRASNCLWWVKDSRV*PGGGRL
Trigger: CAGGCGGCCCCCACCAGGGCACACCCTACTGTCCTT...CACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTGAAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR CCA 90 bp GCAGGTAGAAGACACACTGTGAGAGGCAAACGTCTTCACTCATCCTGCAGGGAAGGACCCCTGGGACTGTaGGCTCTGGAGCCTGACCAC +
Preference number: 4 (lower is better)
Translates to: AGRRHTVRGKRLHSSCREGPLGL*ALEPDH
Trigger: GTGGTCAGGCTCCAGAGCCCACAGTCCCAGGGGTCC...TTCCCTGCAGGATGAGTGAAGACGTTTGCCTCTCACAGTGTGTCTTCTACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382285.7
ENST00000382291.7
CDS-3UTR CCA 90 bp GCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGGTTTCTAGGTAGGTGCAGCTCGGCATCATaGACCCCTGGGACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: AHLLSGSRPRPWAWFLGRCSSAS*TPGTVG
Trigger: GCCCACAGTCCCAGGGGTCCATGATGCCGAGCTGCA...CCTACCTAGAAACCAAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382285.7
ENST00000382291.7
CDS-3UTR CCA 90 bp GCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGGTTTCTAGGTAGGCGATGCCCTCCAGCTTaGGGGGCACTGCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: AHLLSGSRPRPWAWFLGRRCPPA*GALHSQ
Trigger: CTGGCTATGCAGTGCCCCCCAAGCTGGAGGGCATCG...CCTACCTAGAAACCAAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR CCA 90 bp CACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGGGCTGGCCCAGAAGAGGCAGATaGCGAGCAGAACTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: HPPHLSTRASNCLWWVGWPRRGR*RAELQL
Trigger: CAGCTGGAGTTCTGCTCGCCATCTGCCTCTTCTGGG...CCAGCCCACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp GGGTTGAAGGAGATGTTTTCTGCCCCTGAGGGCCTTGGGAAGAGGGTGTGGGTACCCAGAAGAGGCAGATaGCGAGCAGAACTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GLKEMFSAPEGLGKRVWVPRRGR*RAELQL
Trigger: CAGCTGGAGTTCTGCTCGCCATCTGCCTCTTCTGGG...TACCCACACCCTCTTCCCAAGGCCCTCAGGGGCAGAAAACATCTCCTTCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp GGCTTGAAAGGGCAAGGGTTTGCCCAAGGTCATGCAGAGGAAGGAGTGGGGACGGGCGAGAACCATGACTaGCCACTGGCATTGCGGAAA +
Preference number: 4 (lower is better)
Translates to: GLKGQGFAQGHAEEGVGTGENHD*PLALRK
Trigger: TTTCCGCAATGCCAGTGGCCAGTCATGGTTCTCGCC...CGTCCCCACTCCTTCCTCTGCATGACCTTGGGCAAACCCTTGCCCTTTCAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp GCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCTCCGGCTGGGGAGGCGAGAACCATGACTaGCCACTGGCATTGCGGAAA +
Preference number: 4 (lower is better)
Translates to: ASELPLVVQKRDDASGWGGENHD*PLALRK
Trigger: TTTCCGCAATGCCAGTGGCCAGTCATGGTTCTCGCC...TCCCCAGCCGGAGGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp TGCTCTCCAGCTGCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCATTGCCCAAAGGGGCTaGCGGGTGGCGAGAACCATG +
Preference number: 4 (lower is better)
Translates to: CSPAASELPLVVQKRDDAIAQRG*RVARTM
Trigger: CATGGTTCTCGCCACCCGCCAGCCCCTTTGGGCAAT...GGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGCAGCTGGAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp TCATCCTGGCGAGAAGAGGAATCTGATCCAAAGCCCTCATGGCAGAGAGGCAGGATTGCCCAAAGGGGCTaGCGGGTGGCGAGAACCATG +
Preference number: 4 (lower is better)
Translates to: SSWREEESDPKPSWQRGRIAQRG*RVARTM
Trigger: CATGGTTCTCGCCACCCGCCAGCCCCTTTGGGCAAT...CCTGCCTCTCTGCCATGAGGGCTTTGGATCAGATTCCTCTTCTCGCCAGGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp AGGCCTCTGGCTAGTCTTTCTGGGCCAAACCTGTCCTCCACCCTGAGGACCCTCCTGGGGAGGGAGCACTaGGATTTGAGCTCCAGATTT +
Preference number: 4 (lower is better)
Translates to: RPLASLSGPNLSSTLRTLLGREH*DLSSRF
Trigger: AAATCTGGAGCTCAAATCCCAGTGCTCCCTCCCCAG...GAGGGTCCTCAGGGTGGAGGACAGGTTTGGCCCAGAAAGACTAGCCAGAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp CACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGGGCTGGGTATCTTGGAAGAGTTaGGGCCCCACTCCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: HPPHLSTRASNCLWWVGWVSWKS*GPTPGE
Trigger: CTCCCCAGGAGTGGGGCCCCAACTCTTCCAAGATAC...CCAGCCCACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp GGGTTGAAGGAGATGTTTTCTGCCCCTGAGGGCCTTGGGAAGAGGGTGTGGGTAGTATCTTGGAAGAGTTaGGGCCCCACTCCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: GLKEMFSAPEGLGKRVWVVSWKS*GPTPGE
Trigger: CTCCCCAGGAGTGGGGCCCCAACTCTTCCAAGATAC...TACCCACACCCTCTTCCCAAGGCCCTCAGGGGCAGAAAACATCTCCTTCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp AGGCCTCTGGCTAGTCTTTCTGGGCCAAACCTGTCCTCCACCCTGAGGACCCTCCTTCATCTGTGTCTATaGAGGGCAGTGCGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: RPLASLSGPNLSSTLRTLLHLCL*RAVRVL
Trigger: GAGGACACGCACTGCCCTCCATAGACACAGATGAAG...GAGGGTCCTCAGGGTGGAGGACAGGTTTGGCCCAGAAAGACTAGCCAGAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp GGCTTGAAAGGGCAAGGGTTTGCCCAAGGTCATGCAGAGGAAGGAGTGGGGACGGGACCATCAGGCCTCTaGCTAGTCTTTCTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: GLKGQGFAQGHAEEGVGTGPSGL*LVFLGQ
Trigger: TTGGCCCAGAAAGACTAGCCAGAGGCCTGATGGTCC...CGTCCCCACTCCTTCCTCTGCATGACCTTGGGCAAACCCTTGCCCTTTCAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp GCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCTCCGGCTGGGGAGGACCATCAGGCCTCTaGCTAGTCTTTCTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: ASELPLVVQKRDDASGWGGPSGL*LVFLGQ
Trigger: TTGGCCCAGAAAGACTAGCCAGAGGCCTGATGGTCC...TCCCCAGCCGGAGGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR CCA 90 bp CACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGGGCTGGGGAGGCCCTTCAGGCTaGTGGAGACTGAAGGTAAGG +
Preference number: 4 (lower is better)
Translates to: HPPHLSTRASNCLWWVGWGGPSG*WRLKVR
Trigger: CCTTACCTTCAGTCTCCACCAGCCTGAAGGGCCTCC...CCAGCCCACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR TCA 90 bp AGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGGTTTCTAGGTGTGGGCTCTGGAGCCTaGCCACTTGGACTGGAGTCG +
Preference number: 4 (lower is better)
Translates to: RAHLLSGSRPRPWAWFLGVGSGA*PLGLES
Trigger: CGACTCCAGTCCAAGTGGTCAGGCTCCAGAGCCCAC...ACCTAGAAACCAAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382285.7
ENST00000382291.7
CDS-3UTR TCA 90 bp CTTCTTCACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGGTGGGCTCTGGAGCCTaGCCACTTGGACTGGAGTCG +
Preference number: 4 (lower is better)
Translates to: LLHPPHLSTRASNCLWWVVGSGA*PLGLES
Trigger: CGACTCCAGTCCAAGTGGTCAGGCTCCAGAGCCCAC...CACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTGAAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382285.7
ENST00000382291.7
CDS-3UTR TCA 90 bp GGCTTGAAAGGGCAAGGGTTTGCCCAAGGTCATGCAGAGGAAGGAGTGGGGACGATTGCGGAAAATGGGTaGCAACTGCTGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GLKGQGFAQGHAEEGVGTIAENG*QLLLWL
Trigger: GAGCCAGAGCAGCAGTTGTCACCCATTTTCCGCAAT...CGTCCCCACTCCTTCCTCTGCATGACCTTGGGCAAACCCTTGCCCTTTCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp GCGCCTCTGAGAGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGGGAGCACTGGGATTTaGGCTCCAGATTTGACCTGG +
Preference number: 4 (lower is better)
Translates to: APLREPIYYQGHGQDRGLGSTGI*APDLTW
Trigger: CCAGGTCAAATCTGGAGCTCAAATCCCAGTGCTCCC...AAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCTCTCAGAGGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp TGCTCTCCAGCTGCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCCAGGAGCTGATGGCTTaGAAGGGCAAGGGTTTGCCC +
Preference number: 4 (lower is better)
Translates to: CSPAASELPLVVQKRDDAQELMA*KGKGLP
Trigger: GGGCAAACCCTTGCCCTTTCAAGCCATCAGCTCCTG...GGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGCAGCTGGAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp TCATCCTGGCGAGAAGAGGAATCTGATCCAAAGCCCTCATGGCAGAGAGGCAGGCAGAGAGGCAGGAGCTaGTGGCTTGAAAGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: SSWREEESDPKPSWQRGRQRGRS*WLERAR
Trigger: CCTTGCCCTTTCAAGCCATCAGCTCCTGCCTCTCTG...CCTGCCTCTCTGCCATGAGGGCTTTGGATCAGATTCCTCTTCTCGCCAGGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp TGCTCTCCAGCTGCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCCAGGGAAAGGCCAAGTaGGCATCTGGGACCCATTCG +
Preference number: 4 (lower is better)
Translates to: CSPAASELPLVVQKRDDAQGKAK*ASGTHS
Trigger: CGAATGGGTCCCAGATGCTCACTTGGCCTTTCCCTG...GGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGCAGCTGGAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp CACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGGGCTGGGGCCCAGGAGGAGGCTaGAGATGTGTTTCTAGTTCC +
Preference number: 4 (lower is better)
Translates to: HPPHLSTRASNCLWWVGWGPGGG*RCVSSS
Trigger: GGAACTAGAAACACATCTTCAGCCTCCTCCTGGGCC...CCAGCCCACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR TCA 90 bp TCCAACCTGAGACCGTTTCTTGTCCTTTCCTTGTCTTTCGTGACCTGGACACATTTCCTTCCAACACAGTaGGGGCCAGGGCCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: SNLRPFLVLSLSFVTWTHFLPTQ*GPGPAG
Trigger: CCCCGCCGGCCCTGGCCCTCACTGTGTTGGAAGGAA...ATGTGTCCAGGTCACGAAAGACAAGGAAAGGACAAGAAACGGTCTCAGGTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608736.1
CDS-3UTR GCA 90 bp GGTCTTCTCATGATTAGGCTGACGTTACGGATTTGGGGGAAGAATGCCACTCAGGGCCGCGGCTGCAGCTaGAGGAACGATTGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: GLLMIRLTLRIWGKNATQGRGCS*RNDCSS
Trigger: CGAGCTGCAATCGTTCCTGCAGCTGCAGCCGCGGCC...CTGAGTGGCATTCTTCCCCCAAATCCGTAACGTCAGCCTAATCATGAGAAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608736.1
CDS-3UTR GCA 90 bp GTGCCAGCCTTCATTTGGTTAAGGTGGTGTCTGCCAGATTTTTCCACTGTGAAGCGCTGGGGCCGCGGCTaGAGCTGCAGGAACGATTGC +
Preference number: 4 (lower is better)
Translates to: VPAFIWLRWCLPDFSTVKRWGRG*SCRNDC
Trigger: GCAATCGTTCCTGCAGCTGCAGCCGCGGCCCCAGCG...CTTCACAGTGGAAAAATCTGGCAGACACCACCTTAACCAAATGAAGGCTGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000608467.5
ENST00000608736.1
CDS-3UTR GCA 90 bp GGATTTGGGGGAAGAATGCCACTCAGGCCAAGTGCCCTTCTCACCACATCATTTGGACCCCATACCACTTaGCATCCTCCACGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GFGGRMPLRPSALLTTSFGPHTT*HPPRWG
Trigger: GCCCCAGCGTGGAGGATGGCAAGTGGTATGGGGTCC...AAATGATGTGGTGAGAAGGGCACTTGGCCTGAGTGGCATTCTTCCCCCAAATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000608736.1
CDS-3UTR GCA 90 bp GGCTTGAAAGGGCAAGGGTTTGCCCAAGGTCATGCAGAGGAAGGAGTGGGGACGGCTGAGAGCAGTGCCTaGACAGTCCTCATAGAAGAG +
Preference number: 4 (lower is better)
Translates to: GLKGQGFAQGHAEEGVGTAESSA*TVLIEE
Trigger: CTCTTCTATGAGGACTGTGCAGGCACTGCTCTCAGC...CGTCCCCACTCCTTCCTCTGCATGACCTTGGGCAAACCCTTGCCCTTTCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp CTTCTTCACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGCTGCCAGGCGACAGGTaGCCAGGGCCTGGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: LLHPPHLSTRASNCLWWVLPGDR*PGPGCS
Trigger: ACTACAACCAGGCCCTGGGCACCTGTCGCCTGGCAG...CACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTGAAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp GGCTTGAAAGGGCAAGGGTTTGCCCAAGGTCATGCAGAGGAAGGAGTGGGGACGAAAATGGGTGACAACTaGTGCTCTGGCTCATCCCCG +
Preference number: 4 (lower is better)
Translates to: GLKGQGFAQGHAEEGVGTKMGDN*CSGSSP
Trigger: CGGGGATGAGCCAGAGCAGCAGTTGTCACCCATTTT...CGTCCCCACTCCTTCCTCTGCATGACCTTGGGCAAACCCTTGCCCTTTCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp GCGCCTCTGAGAGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTACTAGGGCTAGTAATTaGCTGTGGTGGGTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: APLREPIYYQGHGQDRGLTRASN*LWWVGW
Trigger: CCAGCCCACCCACCACAGGCAATTACTAGCCCTAGT...AAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCTCTCAGAGGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR GCA 90 bp GCAGGTAGAAGACACACTGTGAGAGGCAAACGTCTTCACTCATCCTGCAGGGAAGGACCACCGATGCCCTaGTCCACACCAACTGCGTCC +
Preference number: 4 (lower is better)
Translates to: AGRRHTVRGKRLHSSCREGPPMP*STPTAS
Trigger: GGACGCAGTTGGTGTGGAGCAGGGCATCGGTGGTCC...TTCCCTGCAGGATGAGTGAAGACGTTTGCCTCTCACAGTGTGTCTTCTACCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382285.7
CDS-3UTR CCA 90 bp GCGCCTCTGAGAGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTCTTGGACTGGAGTCGTaGACACACTGCTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: APLREPIYYQGHGQDRGLLGLES*THCFLE
Trigger: CTCCAGGAAGCAGTGTGTCCACGACTCCAGTCCAAG...AAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCTCTCAGAGGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382285.7
ENST00000382291.7
CDS-3UTR CCA 90 bp ACAAGACTTTTGACTGGTGGTGCCAGCCTTCATTTGGTTAAGGTGGTGTCTGCCGGACCCCTGGGACTGTaGGCTCTGGAGCCTGACCAC +
Preference number: 4 (lower is better)
Translates to: TRLLTGGASLHLVKVVSAGPLGL*ALEPDH
Trigger: GTGGTCAGGCTCCAGAGCCCACAGTCCCAGGGGTCC...GGCAGACACCACCTTAACCAAATGAAGGCTGGCACCACCAGTCAAAAGTCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608736.1
CDS-3UTR CCA 90 bp GCAGGTAGAAGACACACTGTGAGAGGCAAACGTCTTCACTCATCCTGCAGGGAAGGCATCATGGACCCCTaGGACTGTGGGCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: AGRRHTVRGKRLHSSCREGIMDP*DCGLWS
Trigger: GCTCCAGAGCCCACAGTCCCAGGGGTCCATGATGCC...TTCCCTGCAGGATGAGTGAAGACGTTTGCCTCTCACAGTGTGTCTTCTACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382285.7
ENST00000382291.7
CDS-3UTR CCA 90 bp TCAACAAGACTTTTGACTGGTGGTGCCAGCCTTCATTTGGTTAAGGTGGTGTCTTGCCATCCTCCACGCTaGGGCCGCGGCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: STRLLTGGASLHLVKVVSCHPPR*GRGCSC
Trigger: GCAGCTGCAGCCGCGGCCCCAGCGTGGAGGATGGCA...AGACACCACCTTAACCAAATGAAGGCTGGCACCACCAGTCAAAAGTCTTGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608736.1
CDS-3UTR CCA 90 bp GCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGGTTTCTAGGTAGGGCACTGCATAGCCAGTaGTCAGAGCCGCCACACCCA +
Preference number: 4 (lower is better)
Translates to: AHLLSGSRPRPWAWFLGRALHSQ*SEPPHP
Trigger: TGGGTGTGGCGGCTCTGACCACTGGCTATGCAGTGC...CCTACCTAGAAACCAAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR CCA 90 bp AGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGGTTTCTAGGTCGATGCCCTCCAGCTTaGGGGGCACTGCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: RAHLLSGSRPRPWAWFLGRCPPA*GALHSQ
Trigger: CTGGCTATGCAGTGCCCCCCAAGCTGGAGGGCATCG...ACCTAGAAACCAAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR CCA 90 bp CTTCTTCACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGCGATGCCCTCCAGCTTaGGGGGCACTGCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: LLHPPHLSTRASNCLWWVRCPPA*GALHSQ
Trigger: CTGGCTATGCAGTGCCCCCCAAGCTGGAGGGCATCG...CACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTGAAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR CCA 90 bp GCAGGTAGAAGACACACTGTGAGAGGCAAACGTCTTCACTCATCCTGCAGGGAACGATGCCCTCCAGCTTaGGGGGCACTGCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: AGRRHTVRGKRLHSSCRERCPPA*GALHSQ
Trigger: CTGGCTATGCAGTGCCCCCCAAGCTGGAGGGCATCG...TTCCCTGCAGGATGAGTGAAGACGTTTGCCTCTCACAGTGTGTCTTCTACCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp GGCTTGAAAGGGCAAGGGTTTGCCCAAGGTCATGCAGAGGAAGGAGTGGGGACGACCATGACTGGCCACTaGCATTGCGGAAAATGGGTG +
Preference number: 4 (lower is better)
Translates to: GLKGQGFAQGHAEEGVGTTMTGH*HCGKWV
Trigger: CACCCATTTTCCGCAATGCCAGTGGCCAGTCATGGT...CGTCCCCACTCCTTCCTCTGCATGACCTTGGGCAAACCCTTGCCCTTTCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp GGCTTGAAAGGGCAAGGGTTTGCCCAAGGTCATGCAGAGGAAGGAGTGGGGACGGATTTGACCTGGAGTTaGGCTCTAAAGGGACCCTGC +
Preference number: 4 (lower is better)
Translates to: GLKGQGFAQGHAEEGVGTDLTWS*ALKGPC
Trigger: GCAGGGTCCCTTTAGAGCCCAACTCCAGGTCAAATC...CGTCCCCACTCCTTCCTCTGCATGACCTTGGGCAAACCCTTGCCCTTTCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp GGCTTGAAAGGGCAAGGGTTTGCCCAAGGTCATGCAGAGGAAGGAGTGGGGACGCTGGGGAGGGAGCACTaGGATTTGAGCTCCAGATTT +
Preference number: 4 (lower is better)
Translates to: GLKGQGFAQGHAEEGVGTLGREH*DLSSRF
Trigger: AAATCTGGAGCTCAAATCCCAGTGCTCCCTCCCCAG...CGTCCCCACTCCTTCCTCTGCATGACCTTGGGCAAACCCTTGCCCTTTCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp AGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGGTTTCTAGGTTTGGGGCCCCACTCCTaGGGAGGGAGCACTGGGATT +
Preference number: 4 (lower is better)
Translates to: RAHLLSGSRPRPWAWFLGLGPHS*GGSTGI
Trigger: AATCCCAGTGCTCCCTCCCCAGGAGTGGGGCCCCAA...ACCTAGAAACCAAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp GCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCTCCGGCTGGGGAGGAATGCTGGTATCTTaGAAGAGTTGGGGCCCCACT +
Preference number: 4 (lower is better)
Translates to: ASELPLVVQKRDDASGWGGMLVS*KSWGPT
Trigger: AGTGGGGCCCCAACTCTTCCAAGATACCAGCATTCC...TCCCCAGCCGGAGGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp GGCTTGAAAGGGCAAGGGTTTGCCCAAGGTCATGCAGAGGAAGGAGTGGGGACGGGCCAAGTGAGCATCTaGGACCCATTCGAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: GLKGQGFAQGHAEEGVGTGQVSI*DPFELN
Trigger: ATTCAGCTCGAATGGGTCCCAGATGCTCACTTGGCC...CGTCCCCACTCCTTCCTCTGCATGACCTTGGGCAAACCCTTGCCCTTTCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp GCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGGTTTCTAGGTAGGCTGTGGTGGGTGGGCTaGGGGGCTCTGATGCCAAAA +
Preference number: 4 (lower is better)
Translates to: AHLLSGSRPRPWAWFLGRLWWVG*GALMPK
Trigger: TTTTGGCATCAGAGCCCCCCAGCCCACCCACCACAG...CCTACCTAGAAACCAAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR CCA 90 bp CCTGTAGCACAAGAGCTGGCCCAGGAGGAGGCTGAAGATGTGTTTCTAGTTCCTCTGTGGTGGGTGGGCTaGGGGGCTCTGATGCCAAAA +
Preference number: 4 (lower is better)
Translates to: PVAQELAQEEAEDVFLVPLWWVG*GALMPK
Trigger: TTTTGGCATCAGAGCCCCCCAGCCCACCCACCACAG...AGGAACTAGAAACACATCTTCAGCCTCCTCCTGGGCCAGCTCTTGTGCTACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR CCA 90 bp GGGTTGAAGGAGATGTTTTCTGCCCCTGAGGGCCTTGGGAAGAGGGTGTGGGTATCACGGCCAAGACCGTaGGCTTGGTTTCTAGGTAGG +
Preference number: 4 (lower is better)
Translates to: GLKEMFSAPEGLGKRVWVSRPRP*AWFLGR
Trigger: CCTACCTAGAAACCAAGCCCACGGTCTTGGCCGTGA...TACCCACACCCTCTTCCCAAGGCCCTCAGGGGCAGAAAACATCTCCTTCAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp CACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGGGCTGGTCACGGCCAAGACCGTaGGCTTGGTTTCTAGGTAGG +
Preference number: 4 (lower is better)
Translates to: HPPHLSTRASNCLWWVGWSRPRP*AWFLGR
Trigger: CCTACCTAGAAACCAAGCCCACGGTCTTGGCCGTGA...CCAGCCCACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR CCA 90 bp TCATCCTGGCGAGAAGAGGAATCTGATCCAAAGCCCTCATGGCAGAGAGGCAGGGGAGGCCCTTCAGGCTaGTGGAGACTGAAGGTAAGG +
Preference number: 4 (lower is better)
Translates to: SSWREEESDPKPSWQRGRGGPSG*WRLKVR
Trigger: CCTTACCTTCAGTCTCCACCAGCCTGAAGGGCCTCC...CCTGCCTCTCTGCCATGAGGGCTTTGGATCAGATTCCTCTTCTCGCCAGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp TGCTCTCCAGCTGCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCGGAGGCCCTTCAGGCTaGTGGAGACTGAAGGTAAGG +
Preference number: 4 (lower is better)
Translates to: CSPAASELPLVVQKRDDAGGPSG*WRLKVR
Trigger: CCTTACCTTCAGTCTCCACCAGCCTGAAGGGCCTCC...GGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGCAGCTGGAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR TCA 90 bp CACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGGGCTGGATTGCGGAAAATGGGTaGCAACTGCTGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: HPPHLSTRASNCLWWVGWIAENG*QLLLWL
Trigger: GAGCCAGAGCAGCAGTTGTCACCCATTTTCCGCAAT...CCAGCCCACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp GCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGGTTTCTAGGTAGGCCCATTCGAGCTGAATaGCCCCCACCCCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: AHLLSGSRPRPWAWFLGRPIRAE*PPPLHL
Trigger: CAGATGAAGGGGTGGGGGTCATTCAGCTCGAATGGG...CCTACCTAGAAACCAAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp CTTCTTCACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGGGGACCCATTCGAGCTaGATGACCCCCACCCCTTCA +
Preference number: 4 (lower is better)
Translates to: LLHPPHLSTRASNCLWWVGTHSS*MTPTPS
Trigger: TGAAGGGGTGGGGGTCATTCAGCTCGAATGGGTCCC...CACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTGAAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp TGCTCTCCAGCTGCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCAGGGGCTGGCGCCTCTaGGAGAGCCCATTTATTATC +
Preference number: 4 (lower is better)
Translates to: CSPAASELPLVVQKRDDARGWRL*ESPFII
Trigger: GATAATAAATGGGCTCTCTCAGAGGCGCCAGCCCCT...GGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGCAGCTGGAGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR TCA 90 bp CAAGTTGCTGAGTCCAGCCCACACTCAAGAGGAGAAAAATTAAGCTCCATTTCCCATCTTCCAACACAGTaGGGGCCAGGGCCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: QVAESSPHSRGEKLSSISHLPTQ*GPGPAG
Trigger: CCCCGCCGGCCCTGGCCCTCACTGTGTTGGAAGATG...GGAAATGGAGCTTAATTTTTCTCCTCTTGAGTGTGGGCTGGACTCAGCAACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608467.5
CDS-3UTR GCA 90 bp CACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGGGCTGGGCTGAGAGCAGTGCCTaGACAGTCCTCATAGAAGAG +
Preference number: 4 (lower is better)
Translates to: HPPHLSTRASNCLWWVGWAESSA*TVLIEE
Trigger: CTCTTCTATGAGGACTGTGCAGGCACTGCTCTCAGC...CCAGCCCACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR GCA 90 bp GGCTTGAAAGGGCAAGGGTTTGCCCAAGGTCATGCAGAGGAAGGAGTGGGGACGACTGGCCACTGGCATTaGGGAAAATGGGTGACAACT +
Preference number: 4 (lower is better)
Translates to: GLKGQGFAQGHAEEGVGTTGHWH*GKWVTT
Trigger: AGTTGTCACCCATTTTCCGCAATGCCAGTGGCCAGT...CGTCCCCACTCCTTCCTCTGCATGACCTTGGGCAAACCCTTGCCCTTTCAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp AGGCCTCTGGCTAGTCTTTCTGGGCCAAACCTGTCCTCCACCCTGAGGACCCTCTTGGGCTGGATAGTCTaGACAGAAGATTGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: RPLASLSGPNLSSTLRTLLGWIV*TEDCPK
Trigger: CTTTGGGCAATCTTCTGTGCAGACTATCCAGCCCAA...GAGGGTCCTCAGGGTGGAGGACAGGTTTGGCCCAGAAAGACTAGCCAGAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp GGGTTGAAGGAGATGTTTTCTGCCCCTGAGGGCCTTGGGAAGAGGGTGTGGGTAGAAAGGGCAAGGGTTTaGCCAAGGTCATGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: GLKEMFSAPEGLGKRVWVERARV*PRSCRG
Trigger: TCCTCTGCATGACCTTGGGCAAACCCTTGCCCTTTC...TACCCACACCCTCTTCCCAAGGCCCTCAGGGGCAGAAAACATCTCCTTCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp GGGTTGAAGGAGATGTTTTCTGCCCCTGAGGGCCTTGGGAAGAGGGTGTGGGTACGTCTTCACTCATCCTaGAGGGAAAGGCCAAGTGAG +
Preference number: 4 (lower is better)
Translates to: GLKEMFSAPEGLGKRVWVRLHSS*RERPSE
Trigger: CTCACTTGGCCTTTCCCTGCAGGATGAGTGAAGACG...TACCCACACCCTCTTCCCAAGGCCCTCAGGGGCAGAAAACATCTCCTTCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp TGCTCTCCAGCTGCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCACTAGGGCTAGTAATTaGCTGTGGTGGGTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: CSPAASELPLVVQKRDDATRASN*LWWVGW
Trigger: CCAGCCCACCCACCACAGGCAATTACTAGCCCTAGT...GGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGCAGCTGGAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR CCA 90 bp TCATCCTGGCGAGAAGAGGAATCTGATCCAAAGCCCTCATGGCAGAGAGGCAGGCTTGGACTGGAGTCGTaGACACACTGCTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SSWREEESDPKPSWQRGRLGLES*THCFLE
Trigger: CTCCAGGAAGCAGTGTGTCCACGACTCCAGTCCAAG...CCTGCCTCTCTGCCATGAGGGCTTTGGATCAGATTCCTCTTCTCGCCAGGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382285.7
ENST00000382291.7
CDS-3UTR CCA 90 bp CCGGCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGTGCCATCCTCCACGCTaGGGCCGCGGCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PALRDHLNPYPKYIQSHLCHPPR*GRGCSC
Trigger: GCAGCTGCAGCCGCGGCCCCAGCGTGGAGGATGGCA...CAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp GCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGGTTTCTAGGTAGGCCCAGAAGAGGCAGATaGCGAGCAGAACTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: AHLLSGSRPRPWAWFLGRPRRGR*RAELQL
Trigger: CAGCTGGAGTTCTGCTCGCCATCTGCCTCTTCTGGG...CCTACCTAGAAACCAAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp GGCTTGAAAGGGCAAGGGTTTGCCCAAGGTCATGCAGAGGAAGGAGTGGGGACGTGGCATTGCGGAAAATaGGTGACAACTGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GLKGQGFAQGHAEEGVGTWHCGK*VTTAAL
Trigger: CAGAGCAGCAGTTGTCACCCATTTTCCGCAATGCCA...CGTCCCCACTCCTTCCTCTGCATGACCTTGGGCAAACCCTTGCCCTTTCAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp TCATCCTGGCGAGAAGAGGAATCTGATCCAAAGCCCTCATGGCAGAGAGGCAGGGGCGAGAACCATGACTaGCCACTGGCATTGCGGAAA +
Preference number: 4 (lower is better)
Translates to: SSWREEESDPKPSWQRGRGENHD*PLALRK
Trigger: TTTCCGCAATGCCAGTGGCCAGTCATGGTTCTCGCC...CCTGCCTCTCTGCCATGAGGGCTTTGGATCAGATTCCTCTTCTCGCCAGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp CACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGGGCTGGGATTTGACCTGGAGTTaGGCTCTAAAGGGACCCTGC +
Preference number: 4 (lower is better)
Translates to: HPPHLSTRASNCLWWVGWDLTWS*ALKGPC
Trigger: GCAGGGTCCCTTTAGAGCCCAACTCCAGGTCAAATC...CCAGCCCACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp AGGCCTCTGGCTAGTCTTTCTGGGCCAAACCTGTCCTCCACCCTGAGGACCCTCGTGGGTAGGAAGTTTTaGGAGGACTTGAGGAATGCT +
Preference number: 4 (lower is better)
Translates to: RPLASLSGPNLSSTLRTLVGRKF*EDLRNA
Trigger: AGCATTCCTCAAGTCCTCCCAAAACTTCCTACCCAC...GAGGGTCCTCAGGGTGGAGGACAGGTTTGGCCCAGAAAGACTAGCCAGAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp CACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGGGCTGGATGCAGAGGAAGGAGTaGGGACGGGTTGAAGGAGAT +
Preference number: 4 (lower is better)
Translates to: HPPHLSTRASNCLWWVGWMQRKE*GRVEGD
Trigger: ATCTCCTTCAACCCGTCCCCACTCCTTCCTCTGCAT...CCAGCCCACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp GCGCCTCTGAGAGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTATGCAGAGGAAGGAGTaGGGACGGGTTGAAGGAGAT +
Preference number: 4 (lower is better)
Translates to: APLREPIYYQGHGQDRGLMQRKE*GRVEGD
Trigger: ATCTCCTTCAACCCGTCCCCACTCCTTCCTCTGCAT...AAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCTCTCAGAGGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp GCGCCTCTGAGAGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGGCCAAGTGAGCATCTaGGACCCATTCGAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: APLREPIYYQGHGQDRGLGQVSI*DPFELN
Trigger: ATTCAGCTCGAATGGGTCCCAGATGCTCACTTGGCC...AAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCTCTCAGAGGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp CCTGTAGCACAAGAGCTGGCCCAGGAGGAGGCTGAAGATGTGTTTCTAGTTCCTATATCCAGAGCCACCTaGGACCATCAGGCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: PVAQELAQEEAEDVFLVPISRAT*DHQASG
Trigger: GCCAGAGGCCTGATGGTCCCAGGTGGCTCTGGATAT...AGGAACTAGAAACACATCTTCAGCCTCCTCCTGGGCCAGCTCTTGTGCTACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR CCA 90 bp AGGCCTCTGGCTAGTCTTTCTGGGCCAAACCTGTCCTCCACCCTGAGGACCCTCTGGTTTCTAGGTAGGTaGACTTTGAGGGGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: RPLASLSGPNLSSTLRTLWFLGR*TLRGKD
Trigger: GTCTTTGCCCCTCAAAGTCCACCTACCTAGAAACCA...GAGGGTCCTCAGGGTGGAGGACAGGTTTGGCCCAGAAAGACTAGCCAGAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR CCA 90 bp GGGTTGAAGGAGATGTTTTCTGCCCCTGAGGGCCTTGGGAAGAGGGTGTGGGTACCAAGACCGTGGGCTTaGTTTCTAGGTAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: GLKEMFSAPEGLGKRVWVPRPWA*FLGRWT
Trigger: AGTCCACCTACCTAGAAACCAAGCCCACGGTCTTGG...TACCCACACCCTCTTCCCAAGGCCCTCAGGGGCAGAAAACATCTCCTTCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp AGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGGTTTCTAGGTGGAGTGGGGACGGGTTaGAGGAGATGTTTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: RAHLLSGSRPRPWAWFLGGVGTG*RRCFLP
Trigger: GGGCAGAAAACATCTCCTTCAACCCGTCCCCACTCC...ACCTAGAAACCAAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp GCAGGTAGAAGACACACTGTGAGAGGCAAACGTCTTCACTCATCCTGCAGGGAACAGGAGCTGATGGCTTaGAAGGGCAAGGGTTTGCCC +
Preference number: 4 (lower is better)
Translates to: AGRRHTVRGKRLHSSCREQELMA*KGKGLP
Trigger: GGGCAAACCCTTGCCCTTTCAAGCCATCAGCTCCTG...TTCCCTGCAGGATGAGTGAAGACGTTTGCCTCTCACAGTGTGTCTTCTACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp CTTCTTCACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGCAGAGAGGCAGGAGCTaGTGGCTTGAAAGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: LLHPPHLSTRASNCLWWVQRGRS*WLERAR
Trigger: CCTTGCCCTTTCAAGCCATCAGCTCCTGCCTCTCTG...CACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTGAAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp GCAGGTAGAAGACACACTGTGAGAGGCAAACGTCTTCACTCATCCTGCAGGGAACCCATTCGAGCTGAATaGCCCCCACCCCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: AGRRHTVRGKRLHSSCREPIRAE*PPPLHL
Trigger: CAGATGAAGGGGTGGGGGTCATTCAGCTCGAATGGG...TTCCCTGCAGGATGAGTGAAGACGTTTGCCTCTCACAGTGTGTCTTCTACCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp CCTGTAGCACAAGAGCTGGCCCAGGAGGAGGCTGAAGATGTGTTTCTAGTTCCTGGCCCAGGAGGAGGCTaGAGATGTGTTTCTAGTTCC +
Preference number: 4 (lower is better)
Translates to: PVAQELAQEEAEDVFLVPGPGGG*RCVSSS
Trigger: GGAACTAGAAACACATCTTCAGCCTCCTCCTGGGCC...AGGAACTAGAAACACATCTTCAGCCTCCTCCTGGGCCAGCTCTTGTGCTACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR TCA 90 bp CCTGTAGCACAAGAGCTGGCCCAGGAGGAGGCTGAAGATGTGTTTCTAGTTCCTAGGGGCTGGCGCCTCTaGGAGAGCCCATTTATTATC +
Preference number: 4 (lower is better)
Translates to: PVAQELAQEEAEDVFLVPRGWRL*ESPFII
Trigger: GATAATAAATGGGCTCTCTCAGAGGCGCCAGCCCCT...AGGAACTAGAAACACATCTTCAGCCTCCTCCTGGGCCAGCTCTTGTGCTACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR GCA 90 bp TTGGTTAAGGTGGTGTCTGCCAGATTTTTCCACTGTGAAGTCACTGTTTTTGCCCGCTGGGGCCGCGGCTaGAGCTGCAGGAACGATTGC +
Preference number: 4 (lower is better)
Translates to: LVKVVSARFFHCEVTVFARWGRG*SCRNDC
Trigger: GCAATCGTTCCTGCAGCTGCAGCCGCGGCCCCAGCG...GGCAAAAACAGTGACTTCACAGTGGAAAAATCTGGCAGACACCACCTTAACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000608467.5
ENST00000608736.1
CDS-3UTR GCA 90 bp GGGTTGAAGGAGATGTTTTCTGCCCCTGAGGGCCTTGGGAAGAGGGTGTGGGTAACTGGCCACTGGCATTaGGGAAAATGGGTGACAACT +
Preference number: 4 (lower is better)
Translates to: GLKEMFSAPEGLGKRVWVTGHWH*GKWVTT
Trigger: AGTTGTCACCCATTTTCCGCAATGCCAGTGGCCAGT...TACCCACACCCTCTTCCCAAGGCCCTCAGGGGCAGAAAACATCTCCTTCAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp GCGCCTCTGAGAGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTACTGGCCACTGGCATTaGGGAAAATGGGTGACAACT +
Preference number: 4 (lower is better)
Translates to: APLREPIYYQGHGQDRGLTGHWH*GKWVTT
Trigger: AGTTGTCACCCATTTTCCGCAATGCCAGTGGCCAGT...AAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCTCTCAGAGGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp CTTCTTCACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGGTCTGCACAGAAGATTaGCCAAAGGGGCTGGCGGGT +
Preference number: 4 (lower is better)
Translates to: LLHPPHLSTRASNCLWWVVCTED*PKGLAG
Trigger: ACCCGCCAGCCCCTTTGGGCAATCTTCTGTGCAGAC...CACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTGAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp TCATCCTGGCGAGAAGAGGAATCTGATCCAAAGCCCTCATGGCAGAGAGGCAGGGAAAGGGCAAGGGTTTaGCCAAGGTCATGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: SSWREEESDPKPSWQRGRERARV*PRSCRG
Trigger: TCCTCTGCATGACCTTGGGCAAACCCTTGCCCTTTC...CCTGCCTCTCTGCCATGAGGGCTTTGGATCAGATTCCTCTTCTCGCCAGGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp TGCTCTCCAGCTGCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCCGTCTTCACTCATCCTaGAGGGAAAGGCCAAGTGAG +
Preference number: 4 (lower is better)
Translates to: CSPAASELPLVVQKRDDARLHSS*RERPSE
Trigger: CTCACTTGGCCTTTCCCTGCAGGATGAGTGAAGACG...GGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGCAGCTGGAGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp CAAGTTGCTGAGTCCAGCCCACACTCAAGAGGAGAAAAATTAAGCTCCATTTCCGGACCCCTGGGACTGTaGGCTCTGGAGCCTGACCAC +
Preference number: 4 (lower is better)
Translates to: QVAESSPHSRGEKLSSISGPLGL*ALEPDH
Trigger: GTGGTCAGGCTCCAGAGCCCACAGTCCCAGGGGTCC...GGAAATGGAGCTTAATTTTTCTCCTCTTGAGTGTGGGCTGGACTCAGCAACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608467.5
CDS-3UTR CCA 90 bp GTGTCTGCCAGATTTTTCCACTGTGAAGTCACTGTTTTTGCCTTTCCACATTCTTGCCATCCTCCACGCTaGGGCCGCGGCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VSARFFHCEVTVFAFPHSCHPPR*GRGCSC
Trigger: GCAGCTGCAGCCGCGGCCCCAGCGTGGAGGATGGCA...AGAATGTGGAAAGGCAAAAACAGTGACTTCACAGTGGAAAAATCTGGCAGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000608467.5
ENST00000608736.1
CDS-3UTR CCA 90 bp GGGTTGAAGGAGATGTTTTCTGCCCCTGAGGGCCTTGGGAAGAGGGTGTGGGTATGGCATTGCGGAAAATaGGTGACAACTGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GLKEMFSAPEGLGKRVWVWHCGK*VTTAAL
Trigger: CAGAGCAGCAGTTGTCACCCATTTTCCGCAATGCCA...TACCCACACCCTCTTCCCAAGGCCCTCAGGGGCAGAAAACATCTCCTTCAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp GCGCCTCTGAGAGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGAGTCCCTCTTGGGCTaGATAGTCTGCACAGAAGAT +
Preference number: 4 (lower is better)
Translates to: APLREPIYYQGHGQDRGLESLLG*IVCTED
Trigger: ATCTTCTGTGCAGACTATCCAGCCCAAGAGGGACTC...AAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCTCTCAGAGGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp TCATCCTGGCGAGAAGAGGAATCTGATCCAAAGCCCTCATGGCAGAGAGGCAGGCTGGGGAGGGAGCACTaGGATTTGAGCTCCAGATTT +
Preference number: 4 (lower is better)
Translates to: SSWREEESDPKPSWQRGRLGREH*DLSSRF
Trigger: AAATCTGGAGCTCAAATCCCAGTGCTCCCTCCCCAG...CCTGCCTCTCTGCCATGAGGGCTTTGGATCAGATTCCTCTTCTCGCCAGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp TGCTCTCCAGCTGCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCGGAATGCTGGTATCTTaGAAGAGTTGGGGCCCCACT +
Preference number: 4 (lower is better)
Translates to: CSPAASELPLVVQKRDDAGMLVS*KSWGPT
Trigger: AGTGGGGCCCCAACTCTTCCAAGATACCAGCATTCC...GGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGCAGCTGGAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp TCATCCTGGCGAGAAGAGGAATCTGATCCAAAGCCCTCATGGCAGAGAGGCAGGCTTCATCTGTGTCTATaGAGGGCAGTGCGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: SSWREEESDPKPSWQRGRLHLCL*RAVRVL
Trigger: GAGGACACGCACTGCCCTCCATAGACACAGATGAAG...CCTGCCTCTCTGCCATGAGGGCTTTGGATCAGATTCCTCTTCTCGCCAGGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp TGCTCTCCAGCTGCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCCTTCATCTGTGTCTATaGAGGGCAGTGCGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: CSPAASELPLVVQKRDDALHLCL*RAVRVL
Trigger: GAGGACACGCACTGCCCTCCATAGACACAGATGAAG...GGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGCAGCTGGAGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp TCATCCTGGCGAGAAGAGGAATCTGATCCAAAGCCCTCATGGCAGAGAGGCAGGGGCCAAGTGAGCATCTaGGACCCATTCGAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: SSWREEESDPKPSWQRGRGQVSI*DPFELN
Trigger: ATTCAGCTCGAATGGGTCCCAGATGCTCACTTGGCC...CCTGCCTCTCTGCCATGAGGGCTTTGGATCAGATTCCTCTTCTCGCCAGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp GCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGGTTTCTAGGTAGGGGACCATCAGGCCTCTaGCTAGTCTTTCTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: AHLLSGSRPRPWAWFLGRGPSGL*LVFLGQ
Trigger: TTGGCCCAGAAAGACTAGCCAGAGGCCTGATGGTCC...CCTACCTAGAAACCAAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR CCA 90 bp TGCTCTCCAGCTGCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCCCAAGACCGTGGGCTTaGTTTCTAGGTAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: CSPAASELPLVVQKRDDAPRPWA*FLGRWT
Trigger: AGTCCACCTACCTAGAAACCAAGCCCACGGTCTTGG...GGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGCAGCTGGAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR TCA 90 bp GCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGGGAGATCTTCCAACACAGTaGGGGCCAGGGCCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: ALRDHLNPYPKYIQSHLGDLPTQ*GPGPAG
Trigger: CCCCGCCGGCCCTGGCCCTCACTGTGTTGGAAGATC...TCCCAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR TCA 90 bp GCGCCTCTGAGAGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTAGTTTTGGGAGGACTTaGGGAATGCTGGTATCTTGG +
Preference number: 4 (lower is better)
Translates to: APLREPIYYQGHGQDRGLSFGRT*GMLVSW
Trigger: CCAAGATACCAGCATTCCTCAAGTCCTCCCAAAACT...AAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCTCTCAGAGGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp AGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGGTTTCTAGGTAGGGGCTGGCGCCTCTaGGAGAGCCCATTTATTATC +
Preference number: 4 (lower is better)
Translates to: RAHLLSGSRPRPWAWFLGRGWRL*ESPFII
Trigger: GATAATAAATGGGCTCTCTCAGAGGCGCCAGCCCCT...ACCTAGAAACCAAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR TCA 90 bp GGGTTGAAGGAGATGTTTTCTGCCCCTGAGGGCCTTGGGAAGAGGGTGTGGGTAATCCCAGCTGTTTATTaGAAGGGAAGGTGGGATGGA +
Preference number: 4 (lower is better)
Translates to: GLKEMFSAPEGLGKRVWVIPAVY*KGRWDG
Trigger: TCCATCCCACCTTCCCTTTCAATAAACAGCTGGGAT...TACCCACACCCTCTTCCCAAGGCCCTCAGGGGCAGAAAACATCTCCTTCAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp CCTGTAGCACAAGAGCTGGCCCAGGAGGAGGCTGAAGATGTGTTTCTAGTTCCTGCTGAGAGCAGTGCCTaGACAGTCCTCATAGAAGAG +
Preference number: 4 (lower is better)
Translates to: PVAQELAQEEAEDVFLVPAESSA*TVLIEE
Trigger: CTCTTCTATGAGGACTGTGCAGGCACTGCTCTCAGC...AGGAACTAGAAACACATCTTCAGCCTCCTCCTGGGCCAGCTCTTGTGCTACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR GCA 90 bp GCAGGTAGAAGACACACTGTGAGAGGCAAACGTCTTCACTCATCCTGCAGGGAAATGGGTGACAACTGCTaGTCTGGCTCATCCCCGAAG +
Preference number: 4 (lower is better)
Translates to: AGRRHTVRGKRLHSSCREMGDNC*SGSSPK
Trigger: CTTCGGGGATGAGCCAGAGCAGCAGTTGTCACCCAT...TTCCCTGCAGGATGAGTGAAGACGTTTGCCTCTCACAGTGTGTCTTCTACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp CACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGGGCTGGTTGGGCTGGATAGTCTaGACAGAAGATTGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: HPPHLSTRASNCLWWVGWLGWIV*TEDCPK
Trigger: CTTTGGGCAATCTTCTGTGCAGACTATCCAGCCCAA...CCAGCCCACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp AGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGGTTTCTAGGTACTAGGGCTAGTAATTaGCTGTGGTGGGTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RAHLLSGSRPRPWAWFLGTRASN*LWWVGW
Trigger: CCAGCCCACCCACCACAGGCAATTACTAGCCCTAGT...ACCTAGAAACCAAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR GCA 90 bp CTTCTTCACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGACTAGGGCTAGTAATTaGCTGTGGTGGGTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLHPPHLSTRASNCLWWVTRASN*LWWVGW
Trigger: CCAGCCCACCCACCACAGGCAATTACTAGCCCTAGT...CACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTGAAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR GCA 90 bp GCAGGTAGAAGACACACTGTGAGAGGCAAACGTCTTCACTCATCCTGCAGGGAAGAGAAACTCTCTGCCTaGTGTCTCCGCCGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: AGRRHTVRGKRLHSSCREEKLSA*CLRRAK
Trigger: CTTTGCTCGGCGGAGACAGCAGGCAGAGAGTTTCTC...TTCCCTGCAGGATGAGTGAAGACGTTTGCCTCTCACAGTGTGTCTTCTACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382285.7
CDS-3UTR CCA 90 bp CCTGTAGCACAAGAGCTGGCCCAGGAGGAGGCTGAAGATGTGTTTCTAGTTCCTACCATGACTGGCCACTaGCATTGCGGAAAATGGGTG +
Preference number: 4 (lower is better)
Translates to: PVAQELAQEEAEDVFLVPTMTGH*HCGKWV
Trigger: CACCCATTTTCCGCAATGCCAGTGGCCAGTCATGGT...AGGAACTAGAAACACATCTTCAGCCTCCTCCTGGGCCAGCTCTTGTGCTACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp CCTGTAGCACAAGAGCTGGCCCAGGAGGAGGCTGAAGATGTGTTTCTAGTTCCTGATTTGACCTGGAGTTaGGCTCTAAAGGGACCCTGC +
Preference number: 4 (lower is better)
Translates to: PVAQELAQEEAEDVFLVPDLTWS*ALKGPC
Trigger: GCAGGGTCCCTTTAGAGCCCAACTCCAGGTCAAATC...AGGAACTAGAAACACATCTTCAGCCTCCTCCTGGGCCAGCTCTTGTGCTACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp GCGCCTCTGAGAGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGGACTTGAGGAATGCTaGTATCTTGGAAGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: APLREPIYYQGHGQDRGLGLEEC*YLGRVG
Trigger: CCCAACTCTTCCAAGATACCAGCATTCCTCAAGTCC...AAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCTCTCAGAGGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp CACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGGGCTGGGTGGGTAGGAAGTTTTaGGAGGACTTGAGGAATGCT +
Preference number: 4 (lower is better)
Translates to: HPPHLSTRASNCLWWVGWVGRKF*EDLRNA
Trigger: AGCATTCCTCAAGTCCTCCCAAAACTTCCTACCCAC...CCAGCCCACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp TGCTCTCCAGCTGCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCTGCGTGTCCTCATCCTaGCGAGAAGAGGAATCTGAT +
Preference number: 4 (lower is better)
Translates to: CSPAASELPLVVQKRDDACVSSS*REEESD
Trigger: ATCAGATTCCTCTTCTCGCCAGGATGAGGACACGCA...GGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGCAGCTGGAGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp CCTGTAGCACAAGAGCTGGCCCAGGAGGAGGCTGAAGATGTGTTTCTAGTTCCTCCAAGACCGTGGGCTTaGTTTCTAGGTAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: PVAQELAQEEAEDVFLVPPRPWA*FLGRWT
Trigger: AGTCCACCTACCTAGAAACCAAGCCCACGGTCTTGG...AGGAACTAGAAACACATCTTCAGCCTCCTCCTGGGCCAGCTCTTGTGCTACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR TCA 90 bp TGGTTAAGGTGGTGTCTGCCAGATTTTTCCACTGTGAAGTCACTGTTTTTGCCTGTGGGCTCTGGAGCCTaGCCACTTGGACTGGAGTCG +
Preference number: 4 (lower is better)
Translates to: WLRWCLPDFSTVKSLFLPVGSGA*PLGLES
Trigger: CGACTCCAGTCCAAGTGGTCAGGCTCCAGAGCCCAC...AGGCAAAAACAGTGACTTCACAGTGGAAAAATCTGGCAGACACCACCTTAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000608467.5
ENST00000608736.1
CDS-3UTR TCA 90 bp GCAGGTAGAAGACACACTGTGAGAGGCAAACGTCTTCACTCATCCTGCAGGGAAATTGCGGAAAATGGGTaGCAACTGCTGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: AGRRHTVRGKRLHSSCREIAENG*QLLLWL
Trigger: GAGCCAGAGCAGCAGTTGTCACCCATTTTCCGCAAT...TTCCCTGCAGGATGAGTGAAGACGTTTGCCTCTCACAGTGTGTCTTCTACCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp TGCTCTCCAGCTGCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCAGTTTTGGGAGGACTTaGGGAATGCTGGTATCTTGG +
Preference number: 4 (lower is better)
Translates to: CSPAASELPLVVQKRDDASFGRT*GMLVSW
Trigger: CCAAGATACCAGCATTCCTCAAGTCCTCCCAAAACT...GGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGCAGCTGGAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp CTTCTTCACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGGCGAGAAGAGGAATCTaGTCCAAAGCCCTCATGGCA +
Preference number: 4 (lower is better)
Translates to: LLHPPHLSTRASNCLWWVARRGI*SKALMA
Trigger: TGCCATGAGGGCTTTGGATCAGATTCCTCTTCTCGC...CACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTGAAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp TGCTCTCCAGCTGCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCATCCCAGCTGTTTATTaGAAGGGAAGGTGGGATGGA +
Preference number: 4 (lower is better)
Translates to: CSPAASELPLVVQKRDDAIPAVY*KGRWDG
Trigger: TCCATCCCACCTTCCCTTTCAATAAACAGCTGGGAT...GGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGCAGCTGGAGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp AAGCAAGTTGCTGAGTCCAGCCCACACTCAAGAGGAGAAAAATTAAGCTCCATTGGACCCCATACCACTTaGCATCCTCCACGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: KQVAESSPHSRGEKLSSIGPHTT*HPPRWG
Trigger: GCCCCAGCGTGGAGGATGGCAAGTGGTATGGGGTCC...AATGGAGCTTAATTTTTCTCCTCTTGAGTGTGGGCTGGACTCAGCAACTTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000608467.5
CDS-3UTR GCA 90 bp CCGGCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGCTGCCAGGCGACAGGTaGCCAGGGCCTGGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: PALRDHLNPYPKYIQSHLLPGDR*PGPGCS
Trigger: ACTACAACCAGGCCCTGGGCACCTGTCGCCTGGCAG...CAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp GCGCCTCTGAGAGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGGAGGACTTGAGGAATaGTGGTATCTTGGAAGAGTT +
Preference number: 4 (lower is better)
Translates to: APLREPIYYQGHGQDRGLGGLEE*WYLGRV
Trigger: AACTCTTCCAAGATACCAGCATTCCTCAAGTCCTCC...AAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCTCTCAGAGGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp GCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCTCCGGCTGGGGATGTGTTTCTAGTTCCTaGATGCTGCTTTGTTGTGTG +
Preference number: 4 (lower is better)
Translates to: ASELPLVVQKRDDASGWGCVSSS*MLLCCV
Trigger: CACACAACAAAGCAGCATGCAGGAACTAGAAACACA...TCCCCAGCCGGAGGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR GCA 90 bp GGCTTGAAAGGGCAAGGGTTTGCCCAAGGTCATGCAGAGGAAGGAGTGGGGACGTGTGTTTCTAGTTCCTaGATGCTGCTTTGTTGTGTG +
Preference number: 4 (lower is better)
Translates to: GLKGQGFAQGHAEEGVGTCVSSS*MLLCCV
Trigger: CACACAACAAAGCAGCATGCAGGAACTAGAAACACA...CGTCCCCACTCCTTCCTCTGCATGACCTTGGGCAAACCCTTGCCCTTTCAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp AGAGCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGGTTTCTAGGTCTGCTCCACACCAACTaGGTCCTTTTCCCTAGAGAG +
Preference number: 4 (lower is better)
Translates to: RAHLLSGSRPRPWAWFLGLLHTN*VLFPRE
Trigger: CTCTCTAGGGAAAAGGACGCAGTTGGTGTGGAGCAG...ACCTAGAAACCAAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382285.7
CDS-3UTR CCA 90 bp ATTTCAGAGGCTGTGATATCAACAAGACTTTTGACTGGTGGTGCCAGCCTTCATGGCATCATGGACCCCTaGGACTGTGGGCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: ISEAVISTRLLTGGASLHGIMDP*DCGLWS
Trigger: GCTCCAGAGCCCACAGTCCCAGGGGTCCATGATGCC...ATGAAGGCTGGCACCACCAGTCAAAAGTCTTGTTGATATCACAGCCTCTGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608736.1
CDS-3UTR CCA 90 bp CCGGCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGTGCAGCTCGGCATCATaGACCCCTGGGACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: PALRDHLNPYPKYIQSHLCSSAS*TPGTVG
Trigger: GCCCACAGTCCCAGGGGTCCATGATGCCGAGCTGCA...CAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382285.7
ENST00000382291.7
CDS-3UTR CCA 90 bp TGGTTAAGGTGGTGTCTGCCAGATTTTTCCACTGTGAAGTCACTGTTTTTGCCTTGCAGCTCGGCATCATaGACCCCTGGGACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: WLRWCLPDFSTVKSLFLPCSSAS*TPGTVG
Trigger: GCCCACAGTCCCAGGGGTCCATGATGCCGAGCTGCA...AGGCAAAAACAGTGACTTCACAGTGGAAAAATCTGGCAGACACCACCTTAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000608467.5
ENST00000608736.1
CDS-3UTR CCA 90 bp CCTGTAGCACAAGAGCTGGCCCAGGAGGAGGCTGAAGATGTGTTTCTAGTTCCTGAGTCCCTCTTGGGCTaGATAGTCTGCACAGAAGAT +
Preference number: 4 (lower is better)
Translates to: PVAQELAQEEAEDVFLVPESLLG*IVCTED
Trigger: ATCTTCTGTGCAGACTATCCAGCCCAAGAGGGACTC...AGGAACTAGAAACACATCTTCAGCCTCCTCCTGGGCCAGCTCTTGTGCTACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp CCGGCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGTTGGGGCCCCACTCCTaGGGAGGGAGCACTGGGATT +
Preference number: 4 (lower is better)
Translates to: PALRDHLNPYPKYIQSHLLGPHS*GGSTGI
Trigger: AATCCCAGTGCTCCCTCCCCAGGAGTGGGGCCCCAA...CAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp GCAGGTAGAAGACACACTGTGAGAGGCAAACGTCTTCACTCATCCTGCAGGGAAGGAATGCTGGTATCTTaGAAGAGTTGGGGCCCCACT +
Preference number: 4 (lower is better)
Translates to: AGRRHTVRGKRLHSSCREGMLVS*KSWGPT
Trigger: AGTGGGGCCCCAACTCTTCCAAGATACCAGCATTCC...TTCCCTGCAGGATGAGTGAAGACGTTTGCCTCTCACAGTGTGTCTTCTACCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp CTTCTTCACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGATGCAGAGGAAGGAGTaGGGACGGGTTGAAGGAGAT +
Preference number: 4 (lower is better)
Translates to: LLHPPHLSTRASNCLWWVMQRKE*GRVEGD
Trigger: ATCTCCTTCAACCCGTCCCCACTCCTTCCTCTGCAT...CACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTGAAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp GCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGGTTTCTAGGTAGGTGCGTGTCCTCATCCTaGCGAGAAGAGGAATCTGAT +
Preference number: 4 (lower is better)
Translates to: AHLLSGSRPRPWAWFLGRCVSSS*REEESD
Trigger: ATCAGATTCCTCTTCTCGCCAGGATGAGGACACGCA...CCTACCTAGAAACCAAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp CATTTGGTTAAGGTGGTGTCTGCCAGATTTTTCCACTGTGAAGTCACTGTTTTTGGCCGCGGCTGCAGCTaGAGGAACGATTGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: HLVKVVSARFFHCEVTVFGRGCS*RNDCSS
Trigger: CGAGCTGCAATCGTTCCTGCAGCTGCAGCCGCGGCC...AAAAACAGTGACTTCACAGTGGAAAAATCTGGCAGACACCACCTTAACCAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000608467.5
ENST00000608736.1
CDS-3UTR GCA 90 bp GCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGGGAGGACCCCATACCACTTaGCATCCTCCACGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: ALRDHLNPYPKYIQSHLGGPHTT*HPPRWG
Trigger: GCCCCAGCGTGGAGGATGGCAAGTGGTATGGGGTCC...TCCCAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp CCGGCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGATTGCCCAAAGGGGCTaGCGGGTGGCGAGAACCATG +
Preference number: 4 (lower is better)
Translates to: PALRDHLNPYPKYIQSHLIAQRG*RVARTM
Trigger: CATGGTTCTCGCCACCCGCCAGCCCCTTTGGGCAAT...CAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp CTTCTTCACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGGAGTCCCTCTTGGGCTaGATAGTCTGCACAGAAGAT +
Preference number: 4 (lower is better)
Translates to: LLHPPHLSTRASNCLWWVESLLG*IVCTED
Trigger: ATCTTCTGTGCAGACTATCCAGCCCAAGAGGGACTC...CACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTGAAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp CCTGTAGCACAAGAGCTGGCCCAGGAGGAGGCTGAAGATGTGTTTCTAGTTCCTGGACTTGAGGAATGCTaGTATCTTGGAAGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: PVAQELAQEEAEDVFLVPGLEEC*YLGRVG
Trigger: CCCAACTCTTCCAAGATACCAGCATTCCTCAAGTCC...AGGAACTAGAAACACATCTTCAGCCTCCTCCTGGGCCAGCTCTTGTGCTACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp CCGGCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGCAGGGAAAGGCCAAGTaGGCATCTGGGACCCATTCG +
Preference number: 4 (lower is better)
Translates to: PALRDHLNPYPKYIQSHLQGKAK*ASGTHS
Trigger: CGAATGGGTCCCAGATGCTCACTTGGCCTTTCCCTG...CAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp GCAGGTAGAAGACACACTGTGAGAGGCAAACGTCTTCACTCATCCTGCAGGGAAATCCCAGCTGTTTATTaGAAGGGAAGGTGGGATGGA +
Preference number: 4 (lower is better)
Translates to: AGRRHTVRGKRLHSSCREIPAVY*KGRWDG
Trigger: TCCATCCCACCTTCCCTTTCAATAAACAGCTGGGAT...TTCCCTGCAGGATGAGTGAAGACGTTTGCCTCTCACAGTGTGTCTTCTACCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp CCGGCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGGTTTCCTCATCTCTCTaGCTGCTGTCTCCGCCGAGC +
Preference number: 4 (lower is better)
Translates to: PALRDHLNPYPKYIQSHLVSSSL*LLSPPS
Trigger: GCTCGGCGGAGACAGCAGGCAGAGAGATGAGGAAAC...CAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382291.7
CDS-3UTR GCA 90 bp CTTCTTCACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGTTGGGCTGGATAGTCTaGACAGAAGATTGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: LLHPPHLSTRASNCLWWVLGWIV*TEDCPK
Trigger: CTTTGGGCAATCTTCTGTGCAGACTATCCAGCCCAA...CACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTGAAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp CATTTGGTTAAGGTGGTGTCTGCCAGATTTTTCCACTGTGAAGTCACTGTTTTTGGCATCATGGACCCCTaGGACTGTGGGCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: HLVKVVSARFFHCEVTVFGIMDP*DCGLWS
Trigger: GCTCCAGAGCCCACAGTCCCAGGGGTCCATGATGCC...AAAAACAGTGACTTCACAGTGGAAAAATCTGGCAGACACCACCTTAACCAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000608467.5
ENST00000608736.1
CDS-3UTR CCA 90 bp ATTTGGTTAAGGTGGTGTCTGCCAGATTTTTCCACTGTGAAGTCACTGTTTTTGTGCAGCTCGGCATCATaGACCCCTGGGACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: IWLRWCLPDFSTVKSLFLCSSAS*TPGTVG
Trigger: GCCCACAGTCCCAGGGGTCCATGATGCCGAGCTGCA...CAAAAACAGTGACTTCACAGTGGAAAAATCTGGCAGACACCACCTTAACCAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000608467.5
ENST00000608736.1
CDS-3UTR CCA 90 bp CCGGCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGATATCCAGAGCCACCTaGGACCATCAGGCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: PALRDHLNPYPKYIQSHLISRAT*DHQASG
Trigger: GCCAGAGGCCTGATGGTCCCAGGTGGCTCTGGATAT...CAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR CCA 90 bp CTTCTTCACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGTGGTTTCTAGGTAGGTaGACTTTGAGGGGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: LLHPPHLSTRASNCLWWVWFLGR*TLRGKD
Trigger: GTCTTTGCCCCTCAAAGTCCACCTACCTAGAAACCA...CACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTGAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR CCA 90 bp GCAGGTAGAAGACACACTGTGAGAGGCAAACGTCTTCACTCATCCTGCAGGGAATGGTTTCTAGGTAGGTaGACTTTGAGGGGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: AGRRHTVRGKRLHSSCREWFLGR*TLRGKD
Trigger: GTCTTTGCCCCTCAAAGTCCACCTACCTAGAAACCA...TTCCCTGCAGGATGAGTGAAGACGTTTGCCTCTCACAGTGTGTCTTCTACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp CCGGCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGAGCTGCAGGAACGATTaGAGCTCGGCATCATGGACC +
Preference number: 4 (lower is better)
Translates to: PALRDHLNPYPKYIQSHLSCRND*SSASWT
Trigger: GGTCCATGATGCCGAGCTGCAATCGTTCCTGCAGCT...CAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp GCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGGGACTGGTTGTAGTCGGCTaGCCGCTGATCCAACACCAG +
Preference number: 4 (lower is better)
Translates to: ALRDHLNPYPKYIQSHLGLVVVG*PLIQHQ
Trigger: CTGGTGTTGGATCAGCGGGCAGCCGACTACAACCAG...TCCCAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp CCGGCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGGTTTGCCCAAGGTCATaGAGAGGAAGGAGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: PALRDHLNPYPKYIQSHLVCPRS*RGRSGD
Trigger: GTCCCCACTCCTTCCTCTGCATGACCTTGGGCAAAC...CAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp TCAACAAGACTTTTGACTGGTGGTGCCAGCCTTCATTTGGTTAAGGTGGTGTCTGCCACTCAGGCCAAGTaGCCTTCTCACCACATCATT +
Preference number: 4 (lower is better)
Translates to: STRLLTGGASLHLVKVVSATQAK*PSHHII
Trigger: AATGATGTGGTGAGAAGGGCACTTGGCCTGAGTGGC...AGACACCACCTTAACCAAATGAAGGCTGGCACCACCAGTCAAAAGTCTTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608736.1
CDS-3UTR CCA 90 bp GTGGTGTCTGCCAGATTTTTCCACTGTGAAGTCACTGTTTTTGCCTTTCCACATCTTGGACTGGAGTCGTaGACACACTGCTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: VVSARFFHCEVTVFAFPHLGLES*THCFLE
Trigger: CTCCAGGAAGCAGTGTGTCCACGACTCCAGTCCAAG...ATGTGGAAAGGCAAAAACAGTGACTTCACAGTGGAAAAATCTGGCAGACACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000608467.5
ENST00000608736.1
CDS-3UTR CCA 90 bp GCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGGGATGGGACTGTGGGCTCTaGAGCCTGACCACTTGGACT +
Preference number: 4 (lower is better)
Translates to: ALRDHLNPYPKYIQSHLGWDCGL*SLTTWT
Trigger: AGTCCAAGTGGTCAGGCTCCAGAGCCCACAGTCCCA...TCCCAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382285.7
ENST00000382291.7
CDS-3UTR CCA 90 bp TCAGGCCAAGTGCCCTTCTCACCACATCATTTCAGAGGCTGTGATATCAACAAGGTGCCAGCCTTCATTTaGTTAAGGTGGTGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: SGQVPFSPHHFRGCDINKVPAFI*LRWCLP
Trigger: TGGCAGACACCACCTTAACCAAATGAAGGCTGGCAC...CTTGTTGATATCACAGCCTCTGAAATGATGTGGTGAGAAGGGCACTTGGCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608736.1
CDS-3UTR TCA 90 bp GATTTTTCCACTGTGAAGTCACTGTTTTTGCCTTTCCACATTCTACTTGTTAGAGTGGGCTCTGGAGCCTaGCCACTTGGACTGGAGTCG +
Preference number: 4 (lower is better)
Translates to: DFSTVKSLFLPFHILLVRVGSGA*PLGLES
Trigger: CGACTCCAGTCCAAGTGGTCAGGCTCCAGAGCCCAC...TCTAACAAGTAGAATGTGGAAAGGCAAAAACAGTGACTTCACAGTGGAAAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000608467.5
CDS-3UTR GCA 90 bp AAGCAAGTTGCTGAGTCCAGCCCACACTCAAGAGGAGAAAAATTAAGCTCCATTGCTGAGAGCAGTGCCTaGACAGTCCTCATAGAAGAG +
Preference number: 4 (lower is better)
Translates to: KQVAESSPHSRGEKLSSIAESSA*TVLIEE
Trigger: CTCTTCTATGAGGACTGTGCAGGCACTGCTCTCAGC...AATGGAGCTTAATTTTTCTCCTCTTGAGTGTGGGCTGGACTCAGCAACTTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608467.5
CDS-3UTR GCA 90 bp CCGGCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGAAAATGGGTGACAACTaGTGCTCTGGCTCATCCCCG +
Preference number: 4 (lower is better)
Translates to: PALRDHLNPYPKYIQSHLKMGDN*CSGSSP
Trigger: CGGGGATGAGCCAGAGCAGCAGTTGTCACCCATTTT...CAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR GCA 90 bp GCAGGTAGAAGACACACTGTGAGAGGCAAACGTCTTCACTCATCCTGCAGGGAATGTGTTTCTAGTTCCTaGATGCTGCTTTGTTGTGTG +
Preference number: 4 (lower is better)
Translates to: AGRRHTVRGKRLHSSCRECVSSS*MLLCCV
Trigger: CACACAACAAAGCAGCATGCAGGAACTAGAAACACA...TTCCCTGCAGGATGAGTGAAGACGTTTGCCTCTCACAGTGTGTCTTCTACCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp TTAAGGTGGTGTCTGCCAGATTTTTCCACTGTGAAGTCACTGTTTTTGCCTTTCCTTGGACTGGAGTCGTaGACACACTGCTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LRWCLPDFSTVKSLFLPFLGLES*THCFLE
Trigger: CTCCAGGAAGCAGTGTGTCCACGACTCCAGTCCAAG...GAAAGGCAAAAACAGTGACTTCACAGTGGAAAAATCTGGCAGACACCACCTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000608467.5
ENST00000608736.1
CDS-3UTR CCA 90 bp GCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGGGAGGACCATCAGGCCTCTaGCTAGTCTTTCTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: ALRDHLNPYPKYIQSHLGGPSGL*LVFLGQ
Trigger: TTGGCCCAGAAAGACTAGCCAGAGGCCTGATGGTCC...TCCCAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR TCA 90 bp CCGGCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGAAGTTGGGGAAACACTaGGAGGGGGTTATGGTGAGA +
Preference number: 4 (lower is better)
Translates to: PALRDHLNPYPKYIQSHLKLGKH*EGVMVR
Trigger: TCTCACCATAACCCCCTCTCAGTGTTTCCCCAACTT...CAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGCCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR TCA 90 bp TCAACAAGACTTTTGACTGGTGGTGCCAGCCTTCATTTGGTTAAGGTGGTGTCTTATCAACAAGACTTTTaGCTGGTGGTGCCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: STRLLTGGASLHLVKVVSYQQDF*LVVPAF
Trigger: GAAGGCTGGCACCACCAGTCAAAAGTCTTGTTGATA...AGACACCACCTTAACCAAATGAAGGCTGGCACCACCAGTCAAAAGTCTTGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608736.1
CDS-3UTR GCA 90 bp TCCACTGTGAAGTCACTGTTTTTGCCTTTCCACATTCTACTTGTTAGAAGCAAGAGCTGCAGGAACGATTaGAGCTCGGCATCATGGACC +
Preference number: 4 (lower is better)
Translates to: STVKSLFLPFHILLVRSKSCRND*SSASWT
Trigger: GGTCCATGATGCCGAGCTGCAATCGTTCCTGCAGCT...CTTGCTTCTAACAAGTAGAATGTGGAAAGGCAAAAACAGTGACTTCACAGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608467.5
CDS-3UTR CCA 90 bp CCGGCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGTGCGTGTCCTCATCCTaGCGAGAAGAGGAATCTGAT +
Preference number: 4 (lower is better)
Translates to: PALRDHLNPYPKYIQSHLCVSSS*REEESD
Trigger: ATCAGATTCCTCTTCTCGCCAGGATGAGGACACGCA...CAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGCCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CCA 90 bp GCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGGGACCAAGACCGTGGGCTTaGTTTCTAGGTAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: ALRDHLNPYPKYIQSHLGPRPWA*FLGRWT
Trigger: AGTCCACCTACCTAGAAACCAAGCCCACGGTCTTGG...TCCCAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR CCA 90 bp CCGGCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGGTGCTTCCACCTTTCTaGGTCTCAGTTTCCTCATCG +
Preference number: 4 (lower is better)
Translates to: PALRDHLNPYPKYIQSHLVLPPF*VSVSSS
Trigger: CGATGAGGAAACTGAGACCCAGAAAGGTGGAAGCAC...CAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGCCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382285.7
CDS-3UTR TCA 90 bp TGGTTAAGGTGGTGTCTGCCAGATTTTTCCACTGTGAAGTCACTGTTTTTGCCTGCTCCATTTCCTCTCTaGTCATCAGTTACCGCATCT +
Preference number: 4 (lower is better)
Translates to: WLRWCLPDFSTVKSLFLPAPFPL*SSVTAS
Trigger: AGATGCGGTAACTGATGATCAGAGAGGAAATGGAGC...AGGCAAAAACAGTGACTTCACAGTGGAAAAATCTGGCAGACACCACCTTAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000608467.5
CDS-3UTR GCA 90 bp CTGCCAGATTTTTCCACTGTGAAGTCACTGTTTTTGCCTTTCCACATTCTACTTGCTGAGAGCAGTGCCTaGACAGTCCTCATAGAAGAG +
Preference number: 4 (lower is better)
Translates to: LPDFSTVKSLFLPFHILLAESSA*TVLIEE
Trigger: CTCTTCTATGAGGACTGTGCAGGCACTGCTCTCAGC...AAGTAGAATGTGGAAAGGCAAAAACAGTGACTTCACAGTGGAAAAATCTGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000608467.5
ENST00000608736.1
CDS-3UTR CCA 90 bp GTTAAGGTGGTGTCTGCCAGATTTTTCCACTGTGAAGTCACTGTTTTTGCCTTTGTGCCAGCCTTCATTTaGTTAAGGTGGTGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: VKVVSARFFHCEVTVFAFVPAFI*LRWCLP
Trigger: TGGCAGACACCACCTTAACCAAATGAAGGCTGGCAC...AAAGGCAAAAACAGTGACTTCACAGTGGAAAAATCTGGCAGACACCACCTTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000608467.5
ENST00000608736.1
CDS-3UTR CCA 90 bp GTTAAGGTGGTGTCTGCCAGATTTTTCCACTGTGAAGTCACTGTTTTTGCCTTTCTGACGTTACGGATTTaGGGGAAGAATGCCACTCAG +
Preference number: 4 (lower is better)
Translates to: VKVVSARFFHCEVTVFAFLTLRI*GKNATQ
Trigger: CTGAGTGGCATTCTTCCCCCAAATCCGTAACGTCAG...AAAGGCAAAAACAGTGACTTCACAGTGGAAAAATCTGGCAGACACCACCTTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000608736.1
3UTR CAA 72 bp TCAACAAGACTTTTGACTGGTGGTGCCAGCCTTCATTaGGTTAAGGTGGTGTCTGCCAGATTTTTCCACTGT +
Preference number: 4 (lower is better)
Translates to: STRLLTGGASLH*VKVVSARFFHC
Trigger: ACAGTGGAAAAATCTGGCAGACACCACCTTAACCAAATGAAGGCTGGCACCACCAGTCAAAAGTCTTGTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608736.1
3UTR CAA 72 bp CACATCATTTCAGAGGCTGTGATATCAACAAGACTTTaGACTGGTGGTGCCAGCCTTCATTTGGTTAAGGTG +
Preference number: 4 (lower is better)
Translates to: HIISEAVISTRL*TGGASLHLVKV
Trigger: CACCTTAACCAAATGAAGGCTGGCACCACCAGTCAAAAGTCTTGTTGATATCACAGCCTCTGAAATGATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608736.1
3UTR CAA 72 bp CTTGTCCTTTCCTTGTCTTTCGTGACCTGGACACATTaGAAGAGTGCTGGTCAGATCTTTTGTAGAATGGGT +
Preference number: 4 (lower is better)
Translates to: LVLSLSFVTWTH*KSAGQIFCRMG
Trigger: ACCCATTCTACAAAAGATCTGACCAGCACTCTTCAAATGTGTCCAGGTCACGAAAGACAAGGAAAGGACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608736.1
CDS-3UTR CCA 90 bp CAAGTTGCTGAGTCCAGCCCACACTCAAGAGGAGAAAAATTAAGCTCCATTTCCTTCATTTGGTTAAGGTaGTGTCTGCCAGATTTTTCC +
Preference number: 4 (lower is better)
Translates to: QVAESSPHSRGEKLSSISFIWLR*CLPDFS
Trigger: GGAAAAATCTGGCAGACACCACCTTAACCAAATGAA...GGAAATGGAGCTTAATTTTTCTCCTCTTGAGTGTGGGCTGGACTCAGCAACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000608467.5
CDS-3UTR CCA 90 bp GTTAAGGTGGTGTCTGCCAGATTTTTCCACTGTGAAGTCACTGTTTTTGCCTTTAAGACTTTTGACTGGTaGTGCCAGCCTTCATTTGGT +
Preference number: 4 (lower is better)
Translates to: VKVVSARFFHCEVTVFAFKTFDW*CQPSFG
Trigger: ACCAAATGAAGGCTGGCACCACCAGTCAAAAGTCTT...AAAGGCAAAAACAGTGACTTCACAGTGGAAAAATCTGGCAGACACCACCTTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000608736.1
CDS-3UTR CCA 90 bp TTGGTTAAGGTGGTGTCTGCCAGATTTTTCCACTGTGAAGTCACTGTTTTTGCCTTGTCTTTCGTGACCTaGACACATTTGAAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: LVKVVSARFFHCEVTVFALSFVT*THLKSA
Trigger: AGCACTCTTCAAATGTGTCCAGGTCACGAAAGACAA...GGCAAAAACAGTGACTTCACAGTGGAAAAATCTGGCAGACACCACCTTAACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000608736.1
CDS-3UTR TCA 90 bp GCCAGATTTTTCCACTGTGAAGTCACTGTTTTTGCCTTTCCACATTCTACTTGTCAGATTTTTCCACTGTaGAGTCACTGTTTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: ARFFHCEVTVFAFPHSTCQIFPL*SHCFCL
Trigger: AAGGCAAAAACAGTGACTTCACAGTGGAAAAATCTG...ACAAGTAGAATGTGGAAAGGCAAAAACAGTGACTTCACAGTGGAAAAATCTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000608467.5
CDS-3UTR TCA 90 bp ATTTGGTTAAGGTGGTGTCTGCCAGATTTTTCCACTGTGAAGTCACTGTTTTTGCAGATTTTTCCACTGTaGAGTCACTGTTTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: IWLRWCLPDFSTVKSLFLQIFPL*SHCFCL
Trigger: AAGGCAAAAACAGTGACTTCACAGTGGAAAAATCTG...CAAAAACAGTGACTTCACAGTGGAAAAATCTGGCAGACACCACCTTAACCAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000608467.5
ENST00000608736.1
CDS-3UTR CCA 90 bp CTGCCAGATTTTTCCACTGTGAAGTCACTGTTTTTGCCTTTCCACATTCTACTTTTCATTTGGTTAAGGTaGTGTCTGCCAGATTTTTCC +
Preference number: 4 (lower is better)
Translates to: LPDFSTVKSLFLPFHILLFIWLR*CLPDFS
Trigger: GGAAAAATCTGGCAGACACCACCTTAACCAAATGAA...AAGTAGAATGTGGAAAGGCAAAAACAGTGACTTCACAGTGGAAAAATCTGGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000608467.5
ENST00000608736.1
CDS GCA 90 bp GGCGCCGGCCCGCCTCAGGGCCTGGCTCTGCAGACGGCGGCCGCCTaGAGCTCCCCCGGCTCCTGTCCCCTTCCAGAGTTCCCTGCTCGC +
Preference number: 5 (lower is better)
Translates to: GAGPPQGLALQTAAA*SSPGSCPLPEFPAR
Trigger: GCGAGCAGGGAACTCTGGAAGGGGACAGGAGCCGGGGGAGCTGCAGGCGGCCGCCGTCTGCAGAGCCAGGCCCTGAGGCGGGCCGGCGCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492242.5
CDS-3UTR CAA 90 bp TGGTGGGGGCCGCCTGAGGATCCCCTAGGAGGCCCTTCAGGCTGGTGGAGACTGGGAGGGGCGAGAGCCTaGAGCGCTGCTCTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: WWGPPEDPLGGPSGWWRLGGARA*SAALQL
Trigger: CAGCTGGAGAGCAGCGCTCAAGGCTCTCGCCCCTCC...CAGTCTCCACCAGCCTGAAGGGCCTCCTAGGGGATCCTCAGGCGGCCCCCACCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS GCA 90 bp TGCCATCCTCCACGCTGGGGCCGCGGCTGCAGCTGCAGGAACGATTaGAGCTCGGCATCATGGACCCCTGGGACTGTGGGCTCTGGAGCC +
Preference number: 5 (lower is better)
Translates to: CHPPRWGRGCSCRND*SSASWTPGTVGSGA
Trigger: GGCTCCAGAGCCCACAGTCCCAGGGGTCCATGATGCCGAGCTGCAATCGTTCCTGCAGCTGCAGCCGCGGCCCCAGCGTGGAGGATGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000608467.5
ENST00000608736.1
ENST00000609179.5
ENST00000609504.5
CDS GCA 90 bp TGTGCCTGCCAGGCGACAGGTGCCCAGGGCCTGGTTGTAGTCGGCTaGCCGCTGATCCAACACCAGGAACTCACCCTCACCGATGCCCTC +
Preference number: 5 (lower is better)
Translates to: CACQATGAQGLVVVG*PLIQHQELTLTDAL
Trigger: GAGGGCATCGGTGAGGGTGAGTTCCTGGTGTTGGATCAGCGGGCAGCCGACTACAACCAGGCCCTGGGCACCTGTCGCCTGGCAGGCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000492242.5
ENST00000621012.1
CDS GCA 90 bp GAACTCCAGCTGCCACACAGAGCGCTGTGCCTGCCAGGCGACAGGTaGCCAGGGCCTGGTTGTAGTCGGCTGCCCGCTGATCCAACACCA +
Preference number: 5 (lower is better)
Translates to: ELQLPHRALCLPGDR*PGPGCSRLPADPTP
Trigger: TGGTGTTGGATCAGCGGGCAGCCGACTACAACCAGGCCCTGGGCACCTGTCGCCTGGCAGGCACAGCGCTCTGTGTGGCAGCTGGAGTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000492242.5
ENST00000621012.1
CDS GCA 90 bp AGAGGCAGATGGCGAGCAGAACTCCAGCTGCCACACAGAGCGCTGTaGCTGCCAGGCGACAGGTGCCCAGGGCCTGGTTGTAGTCGGCTG +
Preference number: 5 (lower is better)
Translates to: RGRWRAELQLPHRAL*LPGDRCPGPGCSRL
Trigger: CAGCCGACTACAACCAGGCCCTGGGCACCTGTCGCCTGGCAGGCACAGCGCTCTGTGTGGCAGCTGGAGTTCTGCTCGCCATCTGCCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000492242.5
ENST00000621012.1
CDS GCA 90 bp GCCTATCATGGCCCAGAAGAGGCAGATGGCGAGCAGAACTCCAGCTaGCACACAGAGCGCTGTGCCTGCCAGGCGACAGGTGCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: AYHGPEEADGEQNSS*HTERCACQATGAQG
Trigger: GCCCTGGGCACCTGTCGCCTGGCAGGCACAGCGCTCTGTGTGGCAGCTGGAGTTCTGCTCGCCATCTGCCTCTTCTGGGCCATGATAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000492242.5
ENST00000621012.1
CDS CCA 90 bp GGTGCAGGTAGGAGCGGACCCCATACCACTTGCCATCCTCCACGCTaGGGCCGCGGCTGCAGCTGCAGGAACGATTGCAGCTCGGCATCA +
Preference number: 5 (lower is better)
Translates to: GAGRSGPHTTCHPPR*GRGCSCRNDCSSAS
Trigger: TGATGCCGAGCTGCAATCGTTCCTGCAGCTGCAGCCGCGGCCCCAGCGTGGAGGATGGCAAGTGGTATGGGGTCCGCTCCTACCTGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000608467.5
ENST00000608736.1
ENST00000609179.5
ENST00000609504.5
ENST00000621012.1
CDS CCA 90 bp ACGTGGCTGTCGGCTTCGGGGTCCAAGGGCTCTGCCTTGGTGTCCTaGCTCAGCCAGCCTATCATGGCCCAGAAGAGGCAGATGGCGAGC +
Preference number: 5 (lower is better)
Translates to: TWLSASGSKGSALVS*LSQPIMAQKRQMAS
Trigger: GCTCGCCATCTGCCTCTTCTGGGCCATGATAGGCTGGCTGAGCCAGGACACCAAGGCAGAGCCCTTGGACCCCGAAGCCGACAGCCACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000492242.5
ENST00000621012.1
CDS CCA 90 bp CCTCATCGAAGCTGCCGTCACTCCCGCAGTTCCCCACCCCTCCCGTaGAAGACCCATCCCTTAACCGAGCCTTCCTCTCCTCGCTGCACC +
Preference number: 5 (lower is better)
Translates to: PHRSCRHSRSSPPLP*KTHPLTEPSSPRCT
Trigger: GGTGCAGCGAGGAGAGGAAGGCTCGGTTAAGGGATGGGTCTTCCACGGGAGGGGTGGGGAACTGCGGGAGTGACGGCAGCTTCGATGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609179.5
CDS TCA 90 bp TGCAGCTCGGCATCATGGACCCCTGGGACTGTGGGCTCTGGAGCCTaGCCACTTGGACTGGAGTCGTGGACACACTGCTTCCTGGAGGCG +
Preference number: 5 (lower is better)
Translates to: CSSASWTPGTVGSGA*PLGLESWTHCFLEA
Trigger: CGCCTCCAGGAAGCAGTGTGTCCACGACTCCAGTCCAAGTGGTCAGGCTCCAGAGCCCACAGTCCCAGGGGTCCATGATGCCGAGCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000608467.5
ENST00000608736.1
ENST00000609179.5
ENST00000609504.5
CDS CCA 90 bp CGGCTGCAGCTGCAGGAACGATTGCAGCTCGGCATCATGGACCCCTaGGACTGTGGGCTCTGGAGCCTGACCACTTGGACTGGAGTCGTG +
Preference number: 5 (lower is better)
Translates to: RLQLQERLQLGIMDP*DCGLWSLTTWTGVV
Trigger: CACGACTCCAGTCCAAGTGGTCAGGCTCCAGAGCCCACAGTCCCAGGGGTCCATGATGCCGAGCTGCAATCGTTCCTGCAGCTGCAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000608467.5
ENST00000608736.1
ENST00000609179.5
ENST00000609504.5
CDS CCA 90 bp GCTGATCCAACACCAGGAACTCACCCTCACCGATGCCCTCCAGCTTaGGGGGCACTGCATAGCCAGTGGTCAGAGCCGCCACACCCAGCA +
Preference number: 5 (lower is better)
Translates to: ADPTPGTHPHRCPPA*GALHSQWSEPPHPA
Trigger: TGCTGGGTGTGGCGGCTCTGACCACTGGCTATGCAGTGCCCCCCAAGCTGGAGGGCATCGGTGAGGGTGAGTTCCTGGTGTTGGATCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000492242.5
ENST00000621012.1
CDS CCA 90 bp ATGGGTGACAACTGCTGCTCTGGCTCATCCCCGAAGACCTCCACGTaGCTGTCGGCTTCGGGGTCCAAGGGCTCTGCCTTGGTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: MGDNCCSGSSPKTST*LSASGSKGSALVSW
Trigger: CCAGGACACCAAGGCAGAGCCCTTGGACCCCGAAGCCGACAGCCACGTGGAGGTCTTCGGGGATGAGCCAGAGCAGCAGTTGTCACCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000492242.5
ENST00000621012.1
CDS-3UTR CAA 90 bp GGCTTGAAAGGGCAAGGGTTTGCCCAAGGTCATGCAGAGGAAGGAGTGGGGACGGGAGGGGCGAGAGCCTaGAGCGCTGCTCTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: GLKGQGFAQGHAEEGVGTGGARA*SAALQL
Trigger: CAGCTGGAGAGCAGCGCTCAAGGCTCTCGCCCCTCC...CGTCCCCACTCCTTCCTCTGCATGACCTTGGGCAAACCCTTGCCCTTTCAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS TCA 90 bp CTCCATTTCCTCTCTGATCATCAGTTACCGCATCTTCCAACACAGTaGGGGCCAGGGCCGGCGGGGGCACAGGACCGGAGGTCCCTCAGG +
Preference number: 5 (lower is better)
Translates to: LHFLSDHQLPHLPTQ*GPGPAGAQDRRSLR
Trigger: CCTGAGGGACCTCCGGTCCTGTGCCCCCGCCGGCCCTGGCCCTCACTGTGTTGGAAGATGCGGTAACTGATGATCAGAGAGGAAATGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608467.5
CDS CCA 90 bp TGGTGTCCTGGCTCAGCCAGCCTATCATGGCCCAGAAGAGGCAGATaGCGAGCAGAACTCCAGCTGCCACACAGAGCGCTGTGCCTGCCA +
Preference number: 5 (lower is better)
Translates to: WCPGSASLSWPRRGR*RAELQLPHRALCLP
Trigger: TGGCAGGCACAGCGCTCTGTGTGGCAGCTGGAGTTCTGCTCGCCATCTGCCTCTTCTGGGCCATGATAGGCTGGCTGAGCCAGGACACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000492242.5
ENST00000621012.1
CDS GCA 90 bp GCAGCTCAGGAGTCCCTCTTGGGCTGGATAGTCTGCACAGAAGATTaGCCAAAGGGGCTGGCGGGTGGCGAGAACCATGACTGGCCACTG +
Preference number: 5 (lower is better)
Translates to: AAQESLLGWIVCTED*PKGLAGGENHDWPL
Trigger: CAGTGGCCAGTCATGGTTCTCGCCACCCGCCAGCCCCTTTGGGCAATCTTCTGTGCAGACTATCCAGCCCAAGAGGGACTCCTGAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000492242.5
ENST00000621012.1
CDS CCA 90 bp GGCATCATGGACCCCTGGGACTGTGGGCTCTGGAGCCTGACCACTTaGACTGGAGTCGTGGACACACTGCTTCCTGGAGGCGTGACCTTA +
Preference number: 5 (lower is better)
Translates to: GIMDPWDCGLWSLTT*TGVVDTLLPGGVTL
Trigger: TAAGGTCACGCCTCCAGGAAGCAGTGTGTCCACGACTCCAGTCCAAGTGGTCAGGCTCCAGAGCCCACAGTCCCAGGGGTCCATGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000608467.5
ENST00000608736.1
ENST00000609179.5
ENST00000609504.5
CDS CCA 90 bp GCTGCAGGAACGATTGCAGCTCGGCATCATGGACCCCTGGGACTGTaGGCTCTGGAGCCTGACCACTTGGACTGGAGTCGTGGACACACT +
Preference number: 5 (lower is better)
Translates to: AAGTIAARHHGPLGL*ALEPDHLDWSRGHT
Trigger: AGTGTGTCCACGACTCCAGTCCAAGTGGTCAGGCTCCAGAGCCCACAGTCCCAGGGGTCCATGATGCCGAGCTGCAATCGTTCCTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000608467.5
ENST00000608736.1
ENST00000609179.5
ENST00000609504.5
CDS-3UTR CAA 90 bp GGGTTGAAGGAGATGTTTTCTGCCCCTGAGGGCCTTGGGAAGAGGGTGTGGGTACGGACCCCATACCACTaGCCATCCTCCACGCTGGGG +
Preference number: 5 (lower is better)
Translates to: GLKEMFSAPEGLGKRVWVRTPYH*PSSTLG
Trigger: CCCCAGCGTGGAGGATGGCAAGTGGTATGGGGTCCG...TACCCACACCCTCTTCCCAAGGCCCTCAGGGGCAGAAAACATCTCCTTCAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS CCA 90 bp CATGGACCCCTGGGACTGTGGGCTCTGGAGCCTGACCACTTGGACTaGAGTCGTGGACACACTGCTTCCTGGAGGCGTGACCTTAGACAA +
Preference number: 5 (lower is better)
Translates to: HGPLGLWALEPDHLD*SRGHTASWRRDLRQ
Trigger: TTGTCTAAGGTCACGCCTCCAGGAAGCAGTGTGTCCACGACTCCAGTCCAAGTGGTCAGGCTCCAGAGCCCACAGTCCCAGGGGTCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000608467.5
ENST00000608736.1
ENST00000609179.5
ENST00000609504.5
CDS CCA 90 bp TGGCGGGTGGCGAGAACCATGACTGGCCACTGGCATTGCGGAAAATaGGTGACAACTGCTGCTCTGGCTCATCCCCGAAGACCTCCACGT +
Preference number: 5 (lower is better)
Translates to: WRVARTMTGHWHCGK*VTTAALAHPRRPPR
Trigger: ACGTGGAGGTCTTCGGGGATGAGCCAGAGCAGCAGTTGTCACCCATTTTCCGCAATGCCAGTGGCCAGTCATGGTTCTCGCCACCCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000492242.5
ENST00000621012.1
CDS CCA 90 bp ATTGCCCAAAGGGGCTGGCGGGTGGCGAGAACCATGACTGGCCACTaGCATTGCGGAAAATGGGTGACAACTGCTGCTCTGGCTCATCCC +
Preference number: 5 (lower is better)
Translates to: IAQRGWRVARTMTGH*HCGKWVTTAALAHP
Trigger: GGGATGAGCCAGAGCAGCAGTTGTCACCCATTTTCCGCAATGCCAGTGGCCAGTCATGGTTCTCGCCACCCGCCAGCCCCTTTGGGCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000492242.5
ENST00000621012.1
CDS CCA 90 bp GAGGACAGGCTGATCTGGGACTGTGGGCTCTGGAGCCTGACCACTTaGACTGGAGTCGTGGACACACTGCTTCCTGGAGGCGTGACCTTA +
Preference number: 5 (lower is better)
Translates to: EDRLIWDCGLWSLTT*TGVVDTLLPGGVTL
Trigger: TAAGGTCACGCCTCCAGGAAGCAGTGTGTCCACGACTCCAGTCCAAGTGGTCAGGCTCCAGAGCCCACAGTCCCAGATCAGCCTGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492242.5
CDS-3UTR CAA 90 bp GCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCTCCGGCTGGGGAAGTCTGCACAGAAGATaGCCCAAAGGGGCTGGCGGG +
Preference number: 5 (lower is better)
Translates to: ASELPLVVQKRDDASGWGSLHRR*PKGAGG
Trigger: CCCGCCAGCCCCTTTGGGCAATCTTCTGTGCAGACT...TCCCCAGCCGGAGGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CAA 90 bp AGGCCTCTGGCTAGTCTTTCTGGGCCAAACCTGTCCTCCACCCTGAGGACCCTCGCAGGAGCTGATGGCTaGAAAGGGCAAGGGTTTGCC +
Preference number: 5 (lower is better)
Translates to: RPLASLSGPNLSSTLRTLAGADG*KGQGFA
Trigger: GGCAAACCCTTGCCCTTTCAAGCCATCAGCTCCTGC...GAGGGTCCTCAGGGTGGAGGACAGGTTTGGCCCAGAAAGACTAGCCAGAGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CAA 90 bp CCTGTAGCACAAGAGCTGGCCCAGGAGGAGGCTGAAGATGTGTTTCTAGTTCCTGGAGGGGCGAGAGCCTaGAGCGCTGCTCTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: PVAQELAQEEAEDVFLVPGGARA*SAALQL
Trigger: CAGCTGGAGAGCAGCGCTCAAGGCTCTCGCCCCTCC...AGGAACTAGAAACACATCTTCAGCCTCCTCCTGGGCCAGCTCTTGTGCTACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS GCA 90 bp AACCATGACTGGCCACTGGCATTGCGGAAAATGGGTGACAACTGCTaGTCTGGCTCATCCCCGAAGACCTCCACGTGGCTGTCGGCTTCG +
Preference number: 5 (lower is better)
Translates to: NHDWPLALRKMGDNC*SGSSPKTSTWLSAS
Trigger: CGAAGCCGACAGCCACGTGGAGGTCTTCGGGGATGAGCCAGAGCAGCAGTTGTCACCCATTTTCCGCAATGCCAGTGGCCAGTCATGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000492242.5
ENST00000621012.1
CDS GCA 90 bp GAGAACCATGACTGGCCACTGGCATTGCGGAAAATGGGTGACAACTaGTGCTCTGGCTCATCCCCGAAGACCTCCACGTGGCTGTCGGCT +
Preference number: 5 (lower is better)
Translates to: ENHDWPLALRKMGDN*CSGSSPKTSTWLSA
Trigger: AGCCGACAGCCACGTGGAGGTCTTCGGGGATGAGCCAGAGCAGCAGTTGTCACCCATTTTCCGCAATGCCAGTGGCCAGTCATGGTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000492242.5
ENST00000621012.1
CDS GCA 90 bp GCCACTCTTCCTGACAGGACCACCGATGCCCTGCTCCACACCAACTaGGTCCTTTTCCCTAGAGAGAAACTCTCTGCCTGCTGTCTCCGC +
Preference number: 5 (lower is better)
Translates to: ATLPDRTTDALLHTN*VLFPREKLSACCLR
Trigger: GCGGAGACAGCAGGCAGAGAGTTTCTCTCTAGGGAAAAGGACGCAGTTGGTGTGGAGCAGGGCATCGGTGGTCCTGTCAGGAAGAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382285.7
ENST00000609504.5
CDS GCA 90 bp TCATCGGCACCCGCGCCACTCTTCCTGACAGGACCACCGATGCCCTaGTCCACACCAACTGCGTCCTTTTCCCTAGAGAGAAACTCTCTG +
Preference number: 5 (lower is better)
Translates to: SSAPAPLFLTGPPMP*STPTASFSLERNSL
Trigger: CAGAGAGTTTCTCTCTAGGGAAAAGGACGCAGTTGGTGTGGAGCAGGGCATCGGTGGTCCTGTCAGGAAGAGTGGCGCGGGTGCCGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382285.7
CDS CCA 90 bp ACAGAAGATTGCCCAAAGGGGCTGGCGGGTGGCGAGAACCATGACTaGCCACTGGCATTGCGGAAAATGGGTGACAACTGCTGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: TEDCPKGLAGGENHD*PLALRKMGDNCCSG
Trigger: GCCAGAGCAGCAGTTGTCACCCATTTTCCGCAATGCCAGTGGCCAGTCATGGTTCTCGCCACCCGCCAGCCCCTTTGGGCAATCTTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000492242.5
ENST00000621012.1
CDS CCA 90 bp CAGGCTGATCTGGGACTGTGGGCTCTGGAGCCTGACCACTTGGACTaGAGTCGTGGACACACTGCTTCCTGGAGGCGTGACCTTAGACAA +
Preference number: 5 (lower is better)
Translates to: QADLGLWALEPDHLD*SRGHTASWRRDLRQ
Trigger: TTGTCTAAGGTCACGCCTCCAGGAAGCAGTGTGTCCACGACTCCAGTCCAAGTGGTCAGGCTCCAGAGCCCACAGTCCCAGATCAGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492242.5
CDS-3UTR CAA 90 bp CCTGTAGCACAAGAGCTGGCCCAGGAGGAGGCTGAAGATGTGTTTCTAGTTCCTCGGACCCCATACCACTaGCCATCCTCCACGCTGGGG +
Preference number: 5 (lower is better)
Translates to: PVAQELAQEEAEDVFLVPRTPYH*PSSTLG
Trigger: CCCCAGCGTGGAGGATGGCAAGTGGTATGGGGTCCG...AGGAACTAGAAACACATCTTCAGCCTCCTCCTGGGCCAGCTCTTGTGCTACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CAA 90 bp GCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCTCCGGCTGGGGAGCTCAGGAGTCCCTCTaGGGCTGGATAGTCTGCACA +
Preference number: 5 (lower is better)
Translates to: ASELPLVVQKRDDASGWGAQESL*GWIVCT
Trigger: TGTGCAGACTATCCAGCCCAAGAGGGACTCCTGAGC...TCCCCAGCCGGAGGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CAA 90 bp GCAGGTAGAAGACACACTGTGAGAGGCAAACGTCTTCACTCATCCTGCAGGGAACGGACCCCATACCACTaGCCATCCTCCACGCTGGGG +
Preference number: 5 (lower is better)
Translates to: AGRRHTVRGKRLHSSCRERTPYH*PSSTLG
Trigger: CCCCAGCGTGGAGGATGGCAAGTGGTATGGGGTCCG...TTCCCTGCAGGATGAGTGAAGACGTTTGCCTCTCACAGTGTGTCTTCTACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CAA 90 bp TCATCCTGGCGAGAAGAGGAATCTGATCCAAAGCCCTCATGGCAGAGAGGCAGGAGTCTGCACAGAAGATaGCCCAAAGGGGCTGGCGGG +
Preference number: 5 (lower is better)
Translates to: SSWREEESDPKPSWQRGRSLHRR*PKGAGG
Trigger: CCCGCCAGCCCCTTTGGGCAATCTTCTGTGCAGACT...CCTGCCTCTCTGCCATGAGGGCTTTGGATCAGATTCCTCTTCTCGCCAGGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CAA 90 bp GGGTTGAAGGAGATGTTTTCTGCCCCTGAGGGCCTTGGGAAGAGGGTGTGGGTAGCTCAGGAGTCCCTCTaGGGCTGGATAGTCTGCACA +
Preference number: 5 (lower is better)
Translates to: GLKEMFSAPEGLGKRVWVAQESL*GWIVCT
Trigger: TGTGCAGACTATCCAGCCCAAGAGGGACTCCTGAGC...TACCCACACCCTCTTCCCAAGGCCCTCAGGGGCAGAAAACATCTCCTTCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS GCA 90 bp GTTTCCTCATCCGCGCCACTCTTCCTGACAGGACCACCGATGCCCTaGTCCACACCAACTGCGTCCTTTTCCCTAGAGAGAAACTCTCTG +
Preference number: 5 (lower is better)
Translates to: VSSSAPLFLTGPPMP*STPTASFSLERNSL
Trigger: CAGAGAGTTTCTCTCTAGGGAAAAGGACGCAGTTGGTGTGGAGCAGGGCATCGGTGGTCCTGTCAGGAAGAGTGGCGCGGATGAGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609504.5
CDS CCA 90 bp ACTGCTTCCTGGAGGCGTGACCTTAGACAAGTGCTTCCACCTTTCTaGGTCTCAGTTTCCTCATCGGCACCCGCGCCACTCTTCCTGACA +
Preference number: 5 (lower is better)
Translates to: TASWRRDLRQVLPPF*VSVSSSAPAPLFLT
Trigger: TGTCAGGAAGAGTGGCGCGGGTGCCGATGAGGAAACTGAGACCCAGAAAGGTGGAAGCACTTGTCTAAGGTCACGCCTCCAGGAAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382285.7
CDS-3UTR CAA 90 bp GGGTTGAAGGAGATGTTTTCTGCCCCTGAGGGCCTTGGGAAGAGGGTGTGGGTAAGGAATGCTGGTATCTaGGAAGAGTTGGGGCCCCAC +
Preference number: 5 (lower is better)
Translates to: GLKEMFSAPEGLGKRVWVRNAGI*EELGPH
Trigger: GTGGGGCCCCAACTCTTCCAAGATACCAGCATTCCT...TACCCACACCCTCTTCCCAAGGCCCTCAGGGGCAGAAAACATCTCCTTCAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS CCA 90 bp ACTGCTTCCTGGAGGCGTGACCTTAGACAAGTGCTTCCACCTTTCTaGGTCTCAGTTTCCTCATCGAAGCTGCCGTCACTCCCGCAGTTC +
Preference number: 5 (lower is better)
Translates to: TASWRRDLRQVLPPF*VSVSSSKLPSLPQF
Trigger: GAACTGCGGGAGTGACGGCAGCTTCGATGAGGAAACTGAGACCCAGAAAGGTGGAAGCACTTGTCTAAGGTCACGCCTCCAGGAAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609179.5
CDS CCA 90 bp ACTGCTTCCTGGAGGCGTGACCTTAGACAAGTGCTTCCACCTTTCTaGGTCTCAGTTTCCTCATCCGCGCCACTCTTCCTGACAGGACCA +
Preference number: 5 (lower is better)
Translates to: TASWRRDLRQVLPPF*VSVSSSAPLFLTGP
Trigger: TGGTCCTGTCAGGAAGAGTGGCGCGGATGAGGAAACTGAGACCCAGAAAGGTGGAAGCACTTGTCTAAGGTCACGCCTCCAGGAAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609504.5
CDS-3UTR CAA 90 bp GCCCATTTATTATCAGGGTCACGGCCAAGACCGTGGGCTTGGTTTCTAGGTAGGCAGCTGCAGGAACGATaGCAGCTCGGCATCATGGAC +
Preference number: 5 (lower is better)
Translates to: AHLLSGSRPRPWAWFLGRQLQER*QLGIMD
Trigger: GTCCATGATGCCGAGCTGCAATCGTTCCTGCAGCTG...CCTACCTAGAAACCAAGCCCACGGTCTTGGCCGTGACCCTGATAATAAATGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CAA 90 bp CACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGGGCTGGAGGGAGCACTGGGATTaGAGCTCCAGATTTGACCTG +
Preference number: 5 (lower is better)
Translates to: HPPHLSTRASNCLWWVGWREHWD*SSRFDL
Trigger: CAGGTCAAATCTGGAGCTCAAATCCCAGTGCTCCCT...CCAGCCCACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CAA 90 bp TCATCCTGGCGAGAAGAGGAATCTGATCCAAAGCCCTCATGGCAGAGAGGCAGGAGGAATGCTGGTATCTaGGAAGAGTTGGGGCCCCAC +
Preference number: 5 (lower is better)
Translates to: SSWREEESDPKPSWQRGRRNAGI*EELGPH
Trigger: GTGGGGCCCCAACTCTTCCAAGATACCAGCATTCCT...CCTGCCTCTCTGCCATGAGGGCTTTGGATCAGATTCCTCTTCTCGCCAGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CAA 90 bp CACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGGGCTGGCTGCATGCTGCTTTGTaGTGTGACCTCGGACATGTC +
Preference number: 5 (lower is better)
Translates to: HPPHLSTRASNCLWWVGWLHAAL*CDLGHV
Trigger: GACATGTCCGAGGTCACACAACAAAGCAGCATGCAG...CCAGCCCACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR CAA 90 bp GGGTTGAAGGAGATGTTTTCTGCCCCTGAGGGCCTTGGGAAGAGGGTGTGGGTACTGCATGCTGCTTTGTaGTGTGACCTCGGACATGTC +
Preference number: 5 (lower is better)
Translates to: GLKEMFSAPEGLGKRVWVLHAAL*CDLGHV
Trigger: GACATGTCCGAGGTCACACAACAAAGCAGCATGCAG...TACCCACACCCTCTTCCCAAGGCCCTCAGGGGCAGAAAACATCTCCTTCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CAA 90 bp GGGTTGAAGGAGATGTTTTCTGCCCCTGAGGGCCTTGGGAAGAGGGTGTGGGTACTAGGTAGGTGGACTTaGAGGGGCAAAGACAACCCA +
Preference number: 5 (lower is better)
Translates to: GLKEMFSAPEGLGKRVWVLGRWT*RGKDNP
Trigger: TGGGTTGTCTTTGCCCCTCAAAGTCCACCTACCTAG...TACCCACACCCTCTTCCCAAGGCCCTCAGGGGCAGAAAACATCTCCTTCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CAA 90 bp CTTCTTCACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGCAGCTGCAGGAACGATaGCAGCTCGGCATCATGGAC +
Preference number: 5 (lower is better)
Translates to: LLHPPHLSTRASNCLWWVQLQER*QLGIMD
Trigger: GTCCATGATGCCGAGCTGCAATCGTTCCTGCAGCTG...CACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTGAAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CAA 90 bp CCTGTAGCACAAGAGCTGGCCCAGGAGGAGGCTGAAGATGTGTTTCTAGTTCCTGACTGGCCACTGGCATaGCGGAAAATGGGTGACAAC +
Preference number: 5 (lower is better)
Translates to: PVAQELAQEEAEDVFLVPDWPLA*RKMGDN
Trigger: GTTGTCACCCATTTTCCGCAATGCCAGTGGCCAGTC...AGGAACTAGAAACACATCTTCAGCCTCCTCCTGGGCCAGCTCTTGTGCTACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CAA 90 bp GCAGGTAGAAGACACACTGTGAGAGGCAAACGTCTTCACTCATCCTGCAGGGAAGCTCAGGAGTCCCTCTaGGGCTGGATAGTCTGCACA +
Preference number: 5 (lower is better)
Translates to: AGRRHTVRGKRLHSSCREAQESL*GWIVCT
Trigger: TGTGCAGACTATCCAGCCCAAGAGGGACTCCTGAGC...TTCCCTGCAGGATGAGTGAAGACGTTTGCCTCTCACAGTGTGTCTTCTACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CAA 90 bp GCAGGTAGAAGACACACTGTGAGAGGCAAACGTCTTCACTCATCCTGCAGGGAAGCAGGAGCTGATGGCTaGAAAGGGCAAGGGTTTGCC +
Preference number: 5 (lower is better)
Translates to: AGRRHTVRGKRLHSSCREAGADG*KGQGFA
Trigger: GGCAAACCCTTGCCCTTTCAAGCCATCAGCTCCTGC...TTCCCTGCAGGATGAGTGAAGACGTTTGCCTCTCACAGTGTGTCTTCTACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CAA 90 bp TGCTCTCCAGCTGCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCCTGCATGCTGCTTTGTaGTGTGACCTCGGACATGTC +
Preference number: 5 (lower is better)
Translates to: CSPAASELPLVVQKRDDALHAAL*CDLGHV
Trigger: GACATGTCCGAGGTCACACAACAAAGCAGCATGCAG...GGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGCAGCTGGAGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR CAA 90 bp CCGGCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGGGAGGGGCGAGAGCCTaGAGCGCTGCTCTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: PALRDHLNPYPKYIQSHLGGARA*SAALQL
Trigger: CAGCTGGAGAGCAGCGCTCAAGGCTCTCGCCCCTCC...CAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR CAA 90 bp GGGTTGAAGGAGATGTTTTCTGCCCCTGAGGGCCTTGGGAAGAGGGTGTGGGTACATCCCAGCTGTTTATaGAAAGGGAAGGTGGGATGG +
Preference number: 5 (lower is better)
Translates to: GLKEMFSAPEGLGKRVWVHPSCL*KGKVGW
Trigger: CCATCCCACCTTCCCTTTCAATAAACAGCTGGGATG...TACCCACACCCTCTTCCCAAGGCCCTCAGGGGCAGAAAACATCTCCTTCAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CAA 90 bp GTCCAGCCCACACTCAAGAGGAGAAAAATTAAGCTCCATTTCCTCTCTGATCATCGGACCCCATACCACTaGCCATCCTCCACGCTGGGG +
Preference number: 5 (lower is better)
Translates to: VQPTLKRRKIKLHFLSDHRTPYH*PSSTLG
Trigger: CCCCAGCGTGGAGGATGGCAAGTGGTATGGGGTCCG...ATGATCAGAGAGGAAATGGAGCTTAATTTTTCTCCTCTTGAGTGTGGGCTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608467.5
CDS-3UTR CAA 90 bp GCAGGTAGAAGACACACTGTGAGAGGCAAACGTCTTCACTCATCCTGCAGGGAAGACTGGCCACTGGCATaGCGGAAAATGGGTGACAAC +
Preference number: 5 (lower is better)
Translates to: AGRRHTVRGKRLHSSCREDWPLA*RKMGDN
Trigger: GTTGTCACCCATTTTCCGCAATGCCAGTGGCCAGTC...TTCCCTGCAGGATGAGTGAAGACGTTTGCCTCTCACAGTGTGTCTTCTACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CAA 90 bp CCTGTAGCACAAGAGCTGGCCCAGGAGGAGGCTGAAGATGTGTTTCTAGTTCCTAGATTTGACCTGGAGTaGGGCTCTAAAGGGACCCTG +
Preference number: 5 (lower is better)
Translates to: PVAQELAQEEAEDVFLVPRFDLE*GSKGTL
Trigger: CAGGGTCCCTTTAGAGCCCAACTCCAGGTCAAATCT...AGGAACTAGAAACACATCTTCAGCCTCCTCCTGGGCCAGCTCTTGTGCTACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CAA 90 bp GCAGGTAGAAGACACACTGTGAGAGGCAAACGTCTTCACTCATCCTGCAGGGAAAGGAATGCTGGTATCTaGGAAGAGTTGGGGCCCCAC +
Preference number: 5 (lower is better)
Translates to: AGRRHTVRGKRLHSSCRERNAGI*EELGPH
Trigger: GTGGGGCCCCAACTCTTCCAAGATACCAGCATTCCT...TTCCCTGCAGGATGAGTGAAGACGTTTGCCTCTCACAGTGTGTCTTCTACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CAA 90 bp GCATCAGAGCTCCCTCTAGTGGTACAGAAGAGAGATGACGCCTCCGGCTGGGGAAAGTTTTGGGAGGACTaGAGGAATGCTGGTATCTTG +
Preference number: 5 (lower is better)
Translates to: ASELPLVVQKRDDASGWGKFWED*RNAGIL
Trigger: CAAGATACCAGCATTCCTCAAGTCCTCCCAAAACTT...TCCCCAGCCGGAGGCGTCATCTCTCTTCTGTACCACTAGAGGGAGCTCTGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CAA 90 bp TCAGGCCAAGTGCCCTTCTCACCACATCATTTCAGAGGCTGTGATATCAACAAGCAGCTGCAGGAACGATaGCAGCTCGGCATCATGGAC +
Preference number: 5 (lower is better)
Translates to: SGQVPFSPHHFRGCDINKQLQER*QLGIMD
Trigger: GTCCATGATGCCGAGCTGCAATCGTTCCTGCAGCTG...CTTGTTGATATCACAGCCTCTGAAATGATGTGGTGAGAAGGGCACTTGGCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608736.1
CDS-3UTR CAA 90 bp GTTAAGGTGGTGTCTGCCAGATTTTTCCACTGTGAAGTCACTGTTTTTGCCTTTCGGACCCCATACCACTaGCCATCCTCCACGCTGGGG +
Preference number: 5 (lower is better)
Translates to: VKVVSARFFHCEVTVFAFRTPYH*PSSTLG
Trigger: CCCCAGCGTGGAGGATGGCAAGTGGTATGGGGTCCG...AAAGGCAAAAACAGTGACTTCACAGTGGAAAAATCTGGCAGACACCACCTTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000608467.5
ENST00000608736.1
CDS-3UTR CAA 90 bp GCAGGTAGAAGACACACTGTGAGAGGCAAACGTCTTCACTCATCCTGCAGGGAAAGATTTGACCTGGAGTaGGGCTCTAAAGGGACCCTG +
Preference number: 5 (lower is better)
Translates to: AGRRHTVRGKRLHSSCRERFDLE*GSKGTL
Trigger: CAGGGTCCCTTTAGAGCCCAACTCCAGGTCAAATCT...TTCCCTGCAGGATGAGTGAAGACGTTTGCCTCTCACAGTGTGTCTTCTACCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CAA 90 bp GGGTTGAAGGAGATGTTTTCTGCCCCTGAGGGCCTTGGGAAGAGGGTGTGGGTAAAGTTTTGGGAGGACTaGAGGAATGCTGGTATCTTG +
Preference number: 5 (lower is better)
Translates to: GLKEMFSAPEGLGKRVWVKFWED*RNAGIL
Trigger: CAAGATACCAGCATTCCTCAAGTCCTCCCAAAACTT...TACCCACACCCTCTTCCCAAGGCCCTCAGGGGCAGAAAACATCTCCTTCAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CAA 90 bp CTTCTTCACCCACCTCACCTATCAACTAGGGCTAGTAATTGCCTGTGGTGGGTGCTAGGTAGGTGGACTTaGAGGGGCAAAGACAACCCA +
Preference number: 5 (lower is better)
Translates to: LLHPPHLSTRASNCLWWVLGRWT*RGKDNP
Trigger: TGGGTTGTCTTTGCCCCTCAAAGTCCACCTACCTAG...CACCCACCACAGGCAATTACTAGCCCTAGTTGATAGGTGAGGTGGGTGAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR CAA 90 bp CCGGCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGCAGCTGCAGGAACGATaGCAGCTCGGCATCATGGAC +
Preference number: 5 (lower is better)
Translates to: PALRDHLNPYPKYIQSHLQLQER*QLGIMD
Trigger: GTCCATGATGCCGAGCTGCAATCGTTCCTGCAGCTG...CAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CAA 90 bp TCCACTGTGAAGTCACTGTTTTTGCCTTTCCACATTCTACTTGTTAGAAGCAAGCAGCTGCAGGAACGATaGCAGCTCGGCATCATGGAC +
Preference number: 5 (lower is better)
Translates to: STVKSLFLPFHILLVRSKQLQER*QLGIMD
Trigger: GTCCATGATGCCGAGCTGCAATCGTTCCTGCAGCTG...CTTGCTTCTAACAAGTAGAATGTGGAAAGGCAAAAACAGTGACTTCACAGTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608467.5
CDS-3UTR CAA 90 bp GCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGGGAGACTGGCCACTGGCATaGCGGAAAATGGGTGACAAC +
Preference number: 5 (lower is better)
Translates to: ALRDHLNPYPKYIQSHLGDWPLA*RKMGDN
Trigger: GTTGTCACCCATTTTCCGCAATGCCAGTGGCCAGTC...TCCCAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CAA 90 bp GCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGGGAAGGGAGCACTGGGATTaGAGCTCCAGATTTGACCTG +
Preference number: 5 (lower is better)
Translates to: ALRDHLNPYPKYIQSHLGREHWD*SSRFDL
Trigger: CAGGTCAAATCTGGAGCTCAAATCCCAGTGCTCCCT...TCCCAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CAA 90 bp GCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGGGACTAGGTAGGTGGACTTaGAGGGGCAAAGACAACCCA +
Preference number: 5 (lower is better)
Translates to: ALRDHLNPYPKYIQSHLGLGRWT*RGKDNP
Trigger: TGGGTTGTCTTTGCCCCTCAAAGTCCACCTACCTAG...TCCCAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000608875.1
ENST00000621012.1
CDS-3UTR CAA 90 bp CCGGCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGCATCCCAGCTGTTTATaGAAAGGGAAGGTGGGATGG +
Preference number: 5 (lower is better)
Translates to: PALRDHLNPYPKYIQSHLHPSCL*KGKVGW
Trigger: CCATCCCACCTTCCCTTTCAATAAACAGCTGGGATG...CAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGCCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CAA 90 bp GCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGGGACATCCCAGCTGTTTATaGAAAGGGAAGGTGGGATGG +
Preference number: 5 (lower is better)
Translates to: ALRDHLNPYPKYIQSHLGHPSCL*KGKVGW
Trigger: CCATCCCACCTTCCCTTTCAATAAACAGCTGGGATG...TCCCAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CAA 90 bp GGTCTTCTCATGATTAGGCTGACGTTACGGATTTGGGGGAAGAATGCCACTCAGGTGAAGTCACTGTTTTaGCCTTTCCACATTCTACTT +
Preference number: 5 (lower is better)
Translates to: GLLMIRLTLRIWGKNATQVKSLF*PFHILL
Trigger: AAGTAGAATGTGGAAAGGCAAAAACAGTGACTTCAC...CTGAGTGGCATTCTTCCCCCAAATCCGTAACGTCAGCCTAATCATGAGAAGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608736.1
CDS-3UTR CAA 90 bp GCTCTTAGAGACCATTTAAATCCATATCCAAAGTATATCCAGAGCCACCTGGGAAAGTTTTGGGAGGACTaGAGGAATGCTGGTATCTTG +
Preference number: 5 (lower is better)
Translates to: ALRDHLNPYPKYIQSHLGKFWED*RNAGIL
Trigger: CAAGATACCAGCATTCCTCAAGTCCTCCCAAAACTT...TCCCAGGTGGCTCTGGATATACTTTGGATATGGATTTAAATGGTCTCTAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000621012.1
CDS-3UTR CAA 90 bp GTCCAGCCCACACTCAAGAGGAGAAAAATTAAGCTCCATTTCCTCTCTGATCATGTGAAGTCACTGTTTTaGCCTTTCCACATTCTACTT +
Preference number: 5 (lower is better)
Translates to: VQPTLKRRKIKLHFLSDHVKSLF*PFHILL
Trigger: AAGTAGAATGTGGAAAGGCAAAAACAGTGACTTCAC...ATGATCAGAGAGGAAATGGAGCTTAATTTTTCTCCTCTTGAGTGTGGGCTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608467.5
CDS GCA 72 bp CCGCCTCAGGGCCTGGCTCTGCAGACGGCGGCCGCCTaGAGCTCCCCCGGCTCCTGTCCCCTTCCAGAGTTC +
Preference number: 6 (lower is better)
Translates to: PPQGLALQTAAA*SSPGSCPLPEF
Trigger: GAACTCTGGAAGGGGACAGGAGCCGGGGGAGCTGCAGGCGGCCGCCGTCTGCAGAGCCAGGCCCTGAGGCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492242.5
CDS GCA 72 bp CTGCCACACAGAGCGCTGTGCCTGCCAGGCGACAGGTaGCCAGGGCCTGGTTGTAGTCGGCTGCCCGCTGAT +
Preference number: 6 (lower is better)
Translates to: LPHRALCLPGDR*PGPGCSRLPAD
Trigger: ATCAGCGGGCAGCCGACTACAACCAGGCCCTGGGCACCTGTCGCCTGGCAGGCACAGCGCTCTGTGTGGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000492242.5
ENST00000621012.1
CDS CAA 72 bp TCCACGCTGGGGCCGCGGCTGCAGCTGCAGGAACGATaGCAGCTCGGCATCATGGACCCCTGGGACTGTGGG +
Preference number: 6 (lower is better)
Translates to: STLGPRLQLQER*QLGIMDPWDCG
Trigger: CCCACAGTCCCAGGGGTCCATGATGCCGAGCTGCAATCGTTCCTGCAGCTGCAGCCGCGGCCCCAGCGTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000608467.5
ENST00000608736.1
ENST00000609179.5
ENST00000609504.5
CDS CAA 90 bp TTGCCATCCTCCACGCTGGGGCCGCGGCTGCAGCTGCAGGAACGATaGCAGCTCGGCATCATGGACCCCTGGGACTGTGGGCTCTGGAGC +
Preference number: 6 (lower is better)
Translates to: LPSSTLGPRLQLQER*QLGIMDPWDCGLWS
Trigger: GCTCCAGAGCCCACAGTCCCAGGGGTCCATGATGCCGAGCTGCAATCGTTCCTGCAGCTGCAGCCGCGGCCCCAGCGTGGAGGATGGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000608467.5
ENST00000608736.1
ENST00000609179.5
ENST00000609504.5
CDS GCA 72 bp AGAAGAGGTGCAGGTAGGAGCGGACCCCATACCACTTaGCATCCTCCACGCTGGGGCCGCGGCTGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: RRGAGRSGPHTT*HPPRWGRGCSC
Trigger: GCAGCTGCAGCCGCGGCCCCAGCGTGGAGGATGGCAAGTGGTATGGGGTCCGCTCCTACCTGCACCTCTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000608467.5
ENST00000608736.1
ENST00000609179.5
ENST00000609504.5
ENST00000621012.1
CDS GCA 72 bp ACTTGCCATCCTCCACGCTGGGGCCGCGGCTGCAGCTaGAGGAACGATTGCAGCTCGGCATCATGGACCCCT +
Preference number: 6 (lower is better)
Translates to: TCHPPRWGRGCS*RNDCSSASWTP
Trigger: AGGGGTCCATGATGCCGAGCTGCAATCGTTCCTGCAGCTGCAGCCGCGGCCCCAGCGTGGAGGATGGCAAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000608467.5
ENST00000608736.1
ENST00000609179.5
ENST00000609504.5
ENST00000621012.1
CDS GCA 72 bp CAGGCGACAGGTGCCCAGGGCCTGGTTGTAGTCGGCTaGCCGCTGATCCAACACCAGGAACTCACCCTCACC +
Preference number: 6 (lower is better)
Translates to: QATGAQGLVVVG*PLIQHQELTLT
Trigger: GGTGAGGGTGAGTTCCTGGTGTTGGATCAGCGGGCAGCCGACTACAACCAGGCCCTGGGCACCTGTCGCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000492242.5
ENST00000621012.1
CDS GCA 72 bp GGCCCAGAAGAGGCAGATGGCGAGCAGAACTCCAGCTaGCACACAGAGCGCTGTGCCTGCCAGGCGACAGGT +
Preference number: 6 (lower is better)
Translates to: GPEEADGEQNSS*HTERCACQATG
Trigger: ACCTGTCGCCTGGCAGGCACAGCGCTCTGTGTGGCAGCTGGAGTTCTGCTCGCCATCTGCCTCTTCTGGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000492242.5
ENST00000621012.1
CDS TCA 72 bp GGGGGCACAGGACCGGAGGTCCCTCAGGGTCGTCGCTaGGAGCAGTGCCTGCACAGTCCTCATAGAAGAGGT +
Preference number: 6 (lower is better)
Translates to: GGTGPEVPQGRR*EQCLHSPHRRG
Trigger: ACCTCTTCTATGAGGACTGTGCAGGCACTGCTCTCAGCGACGACCCTGAGGGACCTCCGGTCCTGTGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000608467.5
ENST00000608736.1
ENST00000608875.1
ENST00000609179.5
ENST00000609504.5
ENST00000621012.1
CDS GCA 72 bp CATACCACTTGCCATCCTCCACGCTGGGGCCGCGGCTaGAGCTGCAGGAACGATTGCAGCTCGGCATCATGG +
Preference number: 6 (lower is better)
Translates to: HTTCHPPRWGRG*SCRNDCSSASW
Trigger: CCATGATGCCGAGCTGCAATCGTTCCTGCAGCTGCAGCCGCGGCCCCAGCGTGGAGGATGGCAAGTGGTATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000608467.5
ENST00000608736.1
ENST00000609179.5
ENST00000609504.5
ENST00000621012.1
CDS CCA 72 bp GACCCCTGGGACTGTGGGCTCTGGAGCCTGACCACTTaGACTGGAGTCGTGGACACACTGCTTCCTGGAGGC +
Preference number: 6 (lower is better)
Translates to: DPWDCGLWSLTT*TGVVDTLLPGG
Trigger: GCCTCCAGGAAGCAGTGTGTCCACGACTCCAGTCCAAGTGGTCAGGCTCCAGAGCCCACAGTCCCAGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000608467.5
ENST00000608736.1
ENST00000609179.5
ENST00000609504.5
CDS CCA 72 bp TCGGCTTCGGGGTCCAAGGGCTCTGCCTTGGTGTCCTaGCTCAGCCAGCCTATCATGGCCCAGAAGAGGCAG +
Preference number: 6 (lower is better)
Translates to: SASGSKGSALVS*LSQPIMAQKRQ
Trigger: CTGCCTCTTCTGGGCCATGATAGGCTGGCTGAGCCAGGACACCAAGGCAGAGCCCTTGGACCCCGAAGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000492242.5
ENST00000621012.1
CDS CCA 72 bp AGCTGCCGTCACTCCCGCAGTTCCCCACCCCTCCCGTaGAAGACCCATCCCTTAACCGAGCCTTCCTCTCCT +
Preference number: 6 (lower is better)
Translates to: SCRHSRSSPPLP*KTHPLTEPSSP
Trigger: AGGAGAGGAAGGCTCGGTTAAGGGATGGGTCTTCCACGGGAGGGGTGGGGAACTGCGGGAGTGACGGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609179.5
CDS CAA 72 bp GGACCCCTGGGACTGTGGGCTCTGGAGCCTGACCACTaGGACTGGAGTCGTGGACACACTGCTTCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: GPLGLWALEPDH*DWSRGHTASWR
Trigger: CCTCCAGGAAGCAGTGTGTCCACGACTCCAGTCCAAGTGGTCAGGCTCCAGAGCCCACAGTCCCAGGGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000608467.5
ENST00000608736.1
ENST00000609179.5
ENST00000609504.5
CDS CAA 90 bp CGGCATCATGGACCCCTGGGACTGTGGGCTCTGGAGCCTGACCACTaGGACTGGAGTCGTGGACACACTGCTTCCTGGAGGCGTGACCTT +
Preference number: 6 (lower is better)
Translates to: RHHGPLGLWALEPDH*DWSRGHTASWRRDL
Trigger: AAGGTCACGCCTCCAGGAAGCAGTGTGTCCACGACTCCAGTCCAAGTGGTCAGGCTCCAGAGCCCACAGTCCCAGGGGTCCATGATGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000608467.5
ENST00000608736.1
ENST00000609179.5
ENST00000609504.5
CDS GCA 72 bp TGGGCAGCTCAGGAGTCCCTCTTGGGCTGGATAGTCTaGACAGAAGATTGCCCAAAGGGGCTGGCGGGTGGC +
Preference number: 6 (lower is better)
Translates to: WAAQESLLGWIV*TEDCPKGLAGG
Trigger: GCCACCCGCCAGCCCCTTTGGGCAATCTTCTGTGCAGACTATCCAGCCCAAGAGGGACTCCTGAGCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000492242.5
ENST00000621012.1
CDS CCA 72 bp CTGGGACTGTGGGCTCTGGAGCCTGACCACTTGGACTaGAGTCGTGGACACACTGCTTCCTGGAGGCGTGAC +
Preference number: 6 (lower is better)
Translates to: LGLWALEPDHLD*SRGHTASWRRD
Trigger: GTCACGCCTCCAGGAAGCAGTGTGTCCACGACTCCAGTCCAAGTGGTCAGGCTCCAGAGCCCACAGTCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000492242.5
ENST00000608467.5
ENST00000608736.1
ENST00000609179.5
ENST00000609504.5
CDS CCA 72 bp GGCTCAGCCAGCCTATCATGGCCCAGAAGAGGCAGATaGCGAGCAGAACTCCAGCTGCCACACAGAGCGCTG +
Preference number: 6 (lower is better)
Translates to: GSASLSWPRRGR*RAELQLPHRAL
Trigger: CAGCGCTCTGTGTGGCAGCTGGAGTTCTGCTCGCCATCTGCCTCTTCTGGGCCATGATAGGCTGGCTGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000492242.5
ENST00000621012.1
CDS CAA 90 bp CGAGGACAGGCTGATCTGGGACTGTGGGCTCTGGAGCCTGACCACTaGGACTGGAGTCGTGGACACACTGCTTCCTGGAGGCGTGACCTT +
Preference number: 6 (lower is better)
Translates to: RGQADLGLWALEPDH*DWSRGHTASWRRDL
Trigger: AAGGTCACGCCTCCAGGAAGCAGTGTGTCCACGACTCCAGTCCAAGTGGTCAGGCTCCAGAGCCCACAGTCCCAGATCAGCCTGTCCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492242.5
CDS TCA 72 bp GCATCATGGACCCCTGGGACTGTGGGCTCTGGAGCCTaGCCACTTGGACTGGAGTCGTGGACACACTGCTTC +
Preference number: 6 (lower is better)
Translates to: ASWTPGTVGSGA*PLGLESWTHCF
Trigger: GAAGCAGTGTGTCCACGACTCCAGTCCAAGTGGTCAGGCTCCAGAGCCCACAGTCCCAGGGGTCCATGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000608467.5
ENST00000608736.1
ENST00000609179.5
ENST00000609504.5
CDS TCA 72 bp TCTCAGTTTCCTCATCGGCACCCGCGCCACTCTTCCTaGCAGGACCACCGATGCCCTGCTCCACACCAACTG +
Preference number: 6 (lower is better)
Translates to: SQFPHRHPRHSS*QDHRCPAPHQL
Trigger: CAGTTGGTGTGGAGCAGGGCATCGGTGGTCCTGTCAGGAAGAGTGGCGCGGGTGCCGATGAGGAAACTGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382285.7
CDS GCA 72 bp CCCGCGCCACTCTTCCTGACAGGACCACCGATGCCCTaGTCCACACCAACTGCGTCCTTTTCCCTAGAGAGA +
Preference number: 6 (lower is better)
Translates to: PAPLFLTGPPMP*STPTASFSLER
Trigger: TCTCTCTAGGGAAAAGGACGCAGTTGGTGTGGAGCAGGGCATCGGTGGTCCTGTCAGGAAGAGTGGCGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382285.7
CDS CCA 72 bp ACGATTGCAGCTCGGCATCATGGACCCCTGGGACTGTaGGCTCTGGAGCCTGACCACTTGGACTGGAGTCGT +
Preference number: 6 (lower is better)
Translates to: TIAARHHGPLGL*ALEPDHLDWSR
Trigger: ACGACTCCAGTCCAAGTGGTCAGGCTCCAGAGCCCACAGTCCCAGGGGTCCATGATGCCGAGCTGCAATCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000608467.5
ENST00000608736.1
ENST00000609179.5
ENST00000609504.5
CDS CCA 72 bp CTGCAGGAACGATTGCAGCTCGGCATCATGGACCCCTaGGACTGTGGGCTCTGGAGCCTGACCACTTGGACT +
Preference number: 6 (lower is better)
Translates to: LQERLQLGIMDP*DCGLWSLTTWT
Trigger: AGTCCAAGTGGTCAGGCTCCAGAGCCCACAGTCCCAGGGGTCCATGATGCCGAGCTGCAATCGTTCCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000608467.5
ENST00000608736.1
ENST00000609179.5
ENST00000609504.5
CDS CCA 72 bp AGGGGCTGGCGGGTGGCGAGAACCATGACTGGCCACTaGCATTGCGGAAAATGGGTGACAACTGCTGCTCTG +
Preference number: 6 (lower is better)
Translates to: RGWRVARTMTGH*HCGKWVTTAAL
Trigger: CAGAGCAGCAGTTGTCACCCATTTTCCGCAATGCCAGTGGCCAGTCATGGTTCTCGCCACCCGCCAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000492242.5
ENST00000621012.1
CDS CCA 72 bp TGCCCAAAGGGGCTGGCGGGTGGCGAGAACCATGACTaGCCACTGGCATTGCGGAAAATGGGTGACAACTGC +
Preference number: 6 (lower is better)
Translates to: CPKGLAGGENHD*PLALRKMGDNC
Trigger: GCAGTTGTCACCCATTTTCCGCAATGCCAGTGGCCAGTCATGGTTCTCGCCACCCGCCAGCCCCTTTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000492242.5
ENST00000621012.1
CDS CCA 72 bp CTGATCTGGGACTGTGGGCTCTGGAGCCTGACCACTTaGACTGGAGTCGTGGACACACTGCTTCCTGGAGGC +
Preference number: 6 (lower is better)
Translates to: LIWDCGLWSLTT*TGVVDTLLPGG
Trigger: GCCTCCAGGAAGCAGTGTGTCCACGACTCCAGTCCAAGTGGTCAGGCTCCAGAGCCCACAGTCCCAGATCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492242.5
CDS CAA 72 bp GCTGATCTGGGACTGTGGGCTCTGGAGCCTGACCACTaGGACTGGAGTCGTGGACACACTGCTTCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: ADLGLWALEPDH*DWSRGHTASWR
Trigger: CCTCCAGGAAGCAGTGTGTCCACGACTCCAGTCCAAGTGGTCAGGCTCCAGAGCCCACAGTCCCAGATCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492242.5
CDS TCA 72 bp TCTGGGTCTCAGTTTCCTCATCCGCGCCACTCTTCCTaGCAGGACCACCGATGCCCTGCTCCACACCAACTG +
Preference number: 6 (lower is better)
Translates to: SGSQFPHPRHSS*QDHRCPAPHQL
Trigger: CAGTTGGTGTGGAGCAGGGCATCGGTGGTCCTGTCAGGAAGAGTGGCGCGGATGAGGAAACTGAGACCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609504.5
CDS GCA 72 bp TGGCCACTGGCATTGCGGAAAATGGGTGACAACTGCTaGTCTGGCTCATCCCCGAAGACCTCCACGTGGCTG +
Preference number: 6 (lower is better)
Translates to: WPLALRKMGDNC*SGSSPKTSTWL
Trigger: CAGCCACGTGGAGGTCTTCGGGGATGAGCCAGAGCAGCAGTTGTCACCCATTTTCCGCAATGCCAGTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000492242.5
ENST00000621012.1
CDS GCA 72 bp GACTGGCCACTGGCATTGCGGAAAATGGGTGACAACTaGTGCTCTGGCTCATCCCCGAAGACCTCCACGTGG +
Preference number: 6 (lower is better)
Translates to: DWPLALRKMGDN*CSGSSPKTSTW
Trigger: CCACGTGGAGGTCTTCGGGGATGAGCCAGAGCAGCAGTTGTCACCCATTTTCCGCAATGCCAGTGGCCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000492242.5
ENST00000621012.1
CDS GCA 72 bp GAGTCCCTCTTGGGCTGGATAGTCTGCACAGAAGATTaGCCAAAGGGGCTGGCGGGTGGCGAGAACCATGAC +
Preference number: 6 (lower is better)
Translates to: ESLLGWIVCTED*PKGLAGGENHD
Trigger: GTCATGGTTCTCGCCACCCGCCAGCCCCTTTGGGCAATCTTCTGTGCAGACTATCCAGCCCAAGAGGGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000492242.5
ENST00000621012.1
CDS GCA 72 bp AAGACCCATCCCTTAACCGAGCCTTCCTCTCCTCGCTaGACCGTCAGTCCCTTTTCCAGGTCTCCATCCCCC +
Preference number: 6 (lower is better)
Translates to: KTHPLTEPSSPR*TVSPFSRSPSP
Trigger: GGGGGATGGAGACCTGGAAAAGGGACTGACGGTGCAGCGAGGAGAGGAAGGCTCGGTTAAGGGATGGGTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609179.5
CDS GCA 72 bp TCCGCGCCACTCTTCCTGACAGGACCACCGATGCCCTaGTCCACACCAACTGCGTCCTTTTCCCTAGAGAGA +
Preference number: 6 (lower is better)
Translates to: SAPLFLTGPPMP*STPTASFSLER
Trigger: TCTCTCTAGGGAAAAGGACGCAGTTGGTGTGGAGCAGGGCATCGGTGGTCCTGTCAGGAAGAGTGGCGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609504.5
CDS CAA 72 bp CTGGCGGGTGGCGAGAACCATGACTGGCCACTGGCATaGCGGAAAATGGGTGACAACTGCTGCTCTGGCTCA +
Preference number: 6 (lower is better)
Translates to: LAGGENHDWPLA*RKMGDNCCSGS
Trigger: TGAGCCAGAGCAGCAGTTGTCACCCATTTTCCGCAATGCCAGTGGCCAGTCATGGTTCTCGCCACCCGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000492242.5
ENST00000621012.1
CDS GCA 72 bp TGGCGGGTGGCGAGAACCATGACTGGCCACTGGCATTaGGGAAAATGGGTGACAACTGCTGCTCTGGCTCAT +
Preference number: 6 (lower is better)
Translates to: WRVARTMTGHWH*GKWVTTAALAH
Trigger: ATGAGCCAGAGCAGCAGTTGTCACCCATTTTCCGCAATGCCAGTGGCCAGTCATGGTTCTCGCCACCCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000492242.5
ENST00000621012.1
CDS CCA 72 bp TGGAGGCGTGACCTTAGACAAGTGCTTCCACCTTTCTaGGTCTCAGTTTCCTCATCGGCACCCGCGCCACTC +
Preference number: 6 (lower is better)
Translates to: WRRDLRQVLPPF*VSVSSSAPAPL
Trigger: GAGTGGCGCGGGTGCCGATGAGGAAACTGAGACCCAGAAAGGTGGAAGCACTTGTCTAAGGTCACGCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382285.7
CDS CCA 72 bp GCGAGAACCATGACTGGCCACTGGCATTGCGGAAAATaGGTGACAACTGCTGCTCTGGCTCATCCCCGAAGA +
Preference number: 6 (lower is better)
Translates to: ARTMTGHWHCGK*VTTAALAHPRR
Trigger: TCTTCGGGGATGAGCCAGAGCAGCAGTTGTCACCCATTTTCCGCAATGCCAGTGGCCAGTCATGGTTCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000492242.5
ENST00000621012.1
CDS CCA 72 bp GACCACTTGGACTGGAGTCGTGGACACACTGCTTCCTaGAGGCGTGACCTTAGACAAGTGCTTCCACCTTTC +
Preference number: 6 (lower is better)
Translates to: DHLDWSRGHTAS*RRDLRQVLPPF
Trigger: GAAAGGTGGAAGCACTTGTCTAAGGTCACGCCTCCAGGAAGCAGTGTGTCCACGACTCCAGTCCAAGTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000382285.7
ENST00000382291.7
ENST00000470439.5
ENST00000492242.5
ENST00000608467.5
ENST00000608736.1
ENST00000609179.5
ENST00000609504.5
CDS CCA 72 bp TGGAGGCGTGACCTTAGACAAGTGCTTCCACCTTTCTaGGTCTCAGTTTCCTCATCCGCGCCACTCTTCCTG +
Preference number: 6 (lower is better)
Translates to: WRRDLRQVLPPF*VSVSSSAPLFL
Trigger: CAGGAAGAGTGGCGCGGATGAGGAAACTGAGACCCAGAAAGGTGGAAGCACTTGTCTAAGGTCACGCCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609504.5
CDS CCA 72 bp TGGAGGCGTGACCTTAGACAAGTGCTTCCACCTTTCTaGGTCTCAGTTTCCTCATCGAAGCTGCCGTCACTC +
Preference number: 6 (lower is better)
Translates to: WRRDLRQVLPPF*VSVSSSKLPSL
Trigger: GAGTGACGGCAGCTTCGATGAGGAAACTGAGACCCAGAAAGGTGGAAGCACTTGTCTAAGGTCACGCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609179.5