RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NRP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000118257

Ensembl transcript IDs: ENST00000272849.7, ENST00000357118.8, ENST00000357785.10, ENST00000360409.7, ENST00000412873.2, ENST00000417189.5, ENST00000450507.5, ENST00000460987.1, ENST00000464003.1, ENST00000467850.1, ENST00000468256.1, ENST00000472299.5, ENST00000477199.1, ENST00000478013.1, ENST00000478054.1, ENST00000485684.5

Found 1355 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGGCCCTCTCTGAACACTCACCCCTCGCCCAAACACACACACAATaGACCAGCCGCTCTCTCACACACCCACACACAGAGAGCTATTCA +
Preference number: 1 (lower is better)
Translates to: GALSEHSPLAQTHTQ*TSRSLTHPHTESYS
Trigger: TGAATAGCTCTCTGTGTGTGGGTGTGTGAGAGAGCGGCTGGTTCATTGTGTGTGTGTTTGGGCGAGGGGTGAGTGTTCAGAGAGGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
3UTR TCA 90 bp ACTCCCCTGCCCCACCAAAGACAGAAAGCAACCCTGTGGCCCTGTTaGCCACCTAGTCCGGGAGAGTGTGGAGGTAATGTGTCATTCAGT +
Preference number: 1 (lower is better)
Translates to: TPLPHQRQKATLWPC*PPSPGECGGNVSFS
Trigger: ACTGAATGACACATTACCTCCACACTCTCCCGGACTAGGTGGTCAACAGGGCCACAGGGTTGCTTTCTGTCTTTGGTGGGGCAGGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR GCA 90 bp GTCATTCATGCTTATTCCTTGGACCCTCATCCCTGTCAACTCCCCTaGCCCACCAAAGACAGAAAGCAACCCTGTGGCCCTGTTGACCAC +
Preference number: 1 (lower is better)
Translates to: VIHAYSLDPHPCQLP*PTKDRKQPCGPVDH
Trigger: GTGGTCAACAGGGCCACAGGGTTGCTTTCTGTCTTTGGTGGGGCAGGGGAGTTGACAGGGATGAGGGTCCAAGGAATAAGCATGAATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR CCA 90 bp CAAGCGAACCAGTCTCTGGAACAAAACCAGCTGAGCCTTGAGTTGTaGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCAAGATGCAGC +
Preference number: 1 (lower is better)
Translates to: QANQSLEQNQLSLEL*SAWGWISSDSPRCS
Trigger: GCTGCATCTTGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAGAGACTGGTTCGCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
3UTR TCA 90 bp TGTGGGCCGAACTCAGGAGGAGCCCTAAAGCTAAGCCCTTGGGCTTaGCAGCTCTACTTTTCACCTCTAACTACCACTGTGCCAATGAGT +
Preference number: 1 (lower is better)
Translates to: CGPNSGGALKLSPWA*QLYFSPLTTTVPMS
Trigger: ACTCATTGGCACAGTGGTAGTTAGAGGTGAAAAGTAGAGCTGTCAAGCCCAAGGGCTTAGCTTTAGGGCTCCTCCTGAGTTCGGCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR CCA 90 bp GAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAGAACTGTAAAATaGCTCACTGAGCATGACAGCATCAGGACCCCTGGAGTGGCTTTC +
Preference number: 1 (lower is better)
Translates to: EVQVRNRARLWRTVK*LTEHDSIRTPGVAF
Trigger: GAAAGCCACTCCAGGGGTCCTGATGCTGTCATGCTCAGTGAGCCATTTTACAGTTCTCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR CCA 90 bp CTGGAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTaGATCTCTTCGGATAGTCCAAGATGCAGCATTAGAGTTGGGTTT +
Preference number: 1 (lower is better)
Translates to: LEQNQLSLELWSAWG*ISSDSPRCSIRVGF
Trigger: AAACCCAACTCTAATGCTGCATCTTGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
3UTR CCA 90 bp CAGTCTCTGGAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTTaGGGGTGGATCTCTTCGGATAGTCCAAGATGCAGCATTAGAGTT +
Preference number: 1 (lower is better)
Translates to: QSLEQNQLSLELWSA*GWISSDSPRCSIRV
Trigger: AACTCTAATGCTGCATCTTGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAGAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
3UTR GCA 90 bp GACAGCATCAGGACCCCTGGAGTGGCTTTCAAACTTACCTTCTTCTaGAGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTCTGAA +
Preference number: 1 (lower is better)
Translates to: DSIRTPGVAFKLTFF*RLLLEIPRTYQLSE
Trigger: TTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTCCAGGGGTCCTGATGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR CCA 90 bp CAATCATTTCGCAGGCATGCCTGGCCCCAAATGCATGACTGGATGTaGACAGCCGAGGTAAAAGCCCTTAATGAGTGGCATATTAGTCAT +
Preference number: 1 (lower is better)
Translates to: QSFRRHAWPQMHDWM*TAEVKALNEWHISH
Trigger: ATGACTAATATGCCACTCATTAAGGGCTTTTACCTCGGCTGTCCACATCCAGTCATGCATTTGGGGCCAGGCATGCCTGCGAAATGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR CCA 90 bp GAATGTCAATCATTTCGCAGGCATGCCTGGCCCCAAATGCATGACTaGATGTGGACAGCCGAGGTAAAAGCCCTTAATGAGTGGCATATT +
Preference number: 1 (lower is better)
Translates to: ECQSFRRHAWPQMHD*MWTAEVKALNEWHI
Trigger: AATATGCCACTCATTAAGGGCTTTTACCTCGGCTGTCCACATCCAGTCATGCATTTGGGGCCAGGCATGCCTGCGAAATGATTGACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR CCA 90 bp CCCCTGGAGTGGCTTTCAAACTTACCTTCTTCTGCAGGCTACTTCTaGAAATCCCTAGGACTTACCAGCTTTCTGAACACTGCGCATCAT +
Preference number: 1 (lower is better)
Translates to: PLEWLSNLPSSAGYF*KSLGLTSFLNTAHH
Trigger: ATGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTCCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR TCA 90 bp GGCAAAAAGGAGATCAATACTGGCAGTGGGGTTTCCCAAAGGGAATaGCTCAAGGAGATGGGTCAGCTAGCCTACCCACAGATAAAGATA +
Preference number: 1 (lower is better)
Translates to: GKKEINTGSGVSQRE*LKEMGQLAYPQIKI
Trigger: TATCTTTATCTGTGGGTAGGCTAGCTGACCCATCTCCTTGAGTCATTCCCTTTGGGAAACCCCACTGCCAGTATTGATCTCCTTTTTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR GCA 90 bp CACTTCTTGAAATCTCAAGGTAGCACATGCTCTAGCCTTTCATCTTaGCTTTTCTTGGCAGGGCTGCTGTGGTTGAGACAGAGTAGCTCT +
Preference number: 1 (lower is better)
Translates to: HFLKSQGSTCSSLSS*LFLAGLLWLRQSSS
Trigger: AGAGCTACTCTGTCTCAACCACAGCAGCCCTGCCAAGAAAAGGCAAGATGAAAGGCTAGAGCATGTGCTACCTTGAGATTTCAAGAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR CCA 90 bp GGAGGTAATGTGTCATTCAGTACAAGGCAAAAAGGAGATCAATACTaGCAGTGGGGTTTCCCAAAGGGAATGACTCAAGGAGATGGGTCA +
Preference number: 1 (lower is better)
Translates to: GGNVSFSTRQKGDQY*QWGFPKGMTQGDGS
Trigger: TGACCCATCTCCTTGAGTCATTCCCTTTGGGAAACCCCACTGCCAGTATTGATCTCCTTTTTGCCTTGTACTGAATGACACATTACCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR GCA 90 bp AAGGCACTTAATAAAAACATAAATTGGTGTGCATGCGTGCGTGCGTaGATGTGTGTATGTGTGTGTGCGTGCATGTGTGTATGCGTGTGT +
Preference number: 1 (lower is better)
Translates to: KALNKNINWCACVRA*MCVCVCACMCVCVC
Trigger: ACACACGCATACACACATGCACGCACACACACATACACACATGCACGCACGCACGCATGCACACCAATTTATGTTTTTATTAAGTGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR TCA 90 bp CTTCTCTCTTACATCCCGCTCCCCTTGTTGCTTAGAGAAGACACATaGGCAGCAATGGTTACATCTTCATTTGACCTTCTCTGTGATGAT +
Preference number: 1 (lower is better)
Translates to: LLSYIPLPLLLREDT*AAMVTSSFDLLCDD
Trigger: ATCATCACAGAGAAGGTCAAATGAAGATGTAACCATTGCTGCTCATGTGTCTTCTCTAAGCAACAAGGGGAGCGGGATGTAAGAGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR GCA 90 bp TACAGTATCATTAGCAACTTCTCTCTTACATCCCGCTCCCCTTGTTaGTTAGAGAAGACACATGAGCAGCAATGGTTACATCTTCATTTG +
Preference number: 1 (lower is better)
Translates to: YSIISNFSLTSRSPC*LEKTHEQQWLHLHL
Trigger: CAAATGAAGATGTAACCATTGCTGCTCATGTGTCTTCTCTAAGCAACAAGGGGAGCGGGATGTAAGAGAGAAGTTGCTAATGATACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR CCA 90 bp CCTATTCACTCACAAAGCACTTTAAGCCTCGTCCAGGCGCTTCTATaGATTTTGACGTGTGAAGTTTCCTTTCCAGTTTGTTTTAAATCG +
Preference number: 1 (lower is better)
Translates to: PIHSQSTLSLVQALL*ILTCEVSFPVCFKS
Trigger: CGATTTAAAACAAACTGGAAAGGAAACTTCACACGTCAAAATCCATAGAAGCGCCTGGACGAGGCTTAAAGTGCTTTGTGAGTGAATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR TCA 90 bp CACAGGCAATCCTTAGGCGTTAATATGAAATCAAGATTTGGATCTTaGTGCGAACAATCTTATCCTTCACACAGTTTCATTCTATTCCTG +
Preference number: 1 (lower is better)
Translates to: HRQSLGVNMKSRFGS*CEQSYPSHSFILFL
Trigger: CAGGAATAGAATGAAACTGTGTGAAGGATAAGATTGTTCGCATCAAGATCCAAATCTTGATTTCATATTAACGCCTAAGGATTGCCTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR TCA 90 bp AGAAAGCAACCCTGTGGCCCTGTTGACCACCTAGTCCGGGAGAGTGTGGAGGTAGCCCCGTTCCTGCAATaGCTTAGCCACCGCGGTCCT +
Preference number: 2 (lower is better)
Translates to: RKQPCGPVDHLVRESVEVAPFLQ*LSHRGP
Trigger: AGGACCGCGGTGGCTAAGTCATTGCAGGAACGGGGC...TACCTCCACACTCTCCCGGACTAGGTGGTCAACAGGGCCACAGGGTTGCTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CCA 90 bp GATCCAGGCTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGTGGAGTGCTTGGGGGTaGATCTCTTCGGATAGTCCA +
Preference number: 2 (lower is better)
Translates to: DPGFPSRLLADCPLRGGMWSAWG*ISSDSP
Trigger: TGGACTATCCGAAGAGATCCACCCCCAAGCACTCCA...CATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAGCCTGGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
3UTR-3UTR TCA 90 bp TCCAGGCTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGGGCGGGAAAGAGATGTCTaGGAGTTCACACAGAAACTA +
Preference number: 2 (lower is better)
Translates to: SRLPLTSPGRLPTERRYGRERDV*EFTQKL
Trigger: TAGTTTCTGTGTGAACTCTCAGACATCTCTTTCCCG...CCCATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAGCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
3UTR-3UTR CCA 90 bp TCCAGGCTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGGGCTTTCTCGTTTGTTTTaGGTGCTGTTCTTGCTTCGG +
Preference number: 2 (lower is better)
Translates to: SRLPLTSPGRLPTERRYGLSRLF*VLFLLR
Trigger: CCGAAGCAAGAACAGCACCCAAAACAAACGAGAAAG...CCCATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAGCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
3UTR-3UTR TCA 90 bp AGAAAGCAACCCTGTGGCCCTGTTGACCACCTAGTCCGGGAGAGTGTGGAGGTACTAAGCCCTTGGGCTTaGCAGCTCTACTTTTCACCT +
Preference number: 2 (lower is better)
Translates to: RKQPCGPVDHLVRESVEVLSPWA*QLYFSP
Trigger: AGGTGAAAAGTAGAGCTGTCAAGCCCAAGGGCTTAG...TACCTCCACACTCTCCCGGACTAGGTGGTCAACAGGGCCACAGGGTTGCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR TCA 90 bp AGAAAGCAACCCTGTGGCCCTGTTGACCACCTAGTCCGGGAGAGTGTGGAGGTAGACTTACCAGCTTTCTaGACACTGCGCATCATGGGA +
Preference number: 2 (lower is better)
Translates to: RKQPCGPVDHLVRESVEVDLPAF*TLRIMG
Trigger: TCCCATGATGCGCAGTGTTCAGAAAGCTGGTAAGTC...TACCTCCACACTCTCCCGGACTAGGTGGTCAACAGGGCCACAGGGTTGCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR GCA 90 bp TCCAGGCTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGGGTCGGATAGTCCAAGATaGAGCATTAGAGTTGGGTTT +
Preference number: 2 (lower is better)
Translates to: SRLPLTSPGRLPTERRYGSDSPR*SIRVGF
Trigger: AAACCCAACTCTAATGCTGCATCTTGGACTATCCGA...CCCATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAGCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
3UTR-3UTR GCA 90 bp CTCTATGGGGCACCTACAGGAATGTCAATCATTTCGCAGGCATGCCTGGCCCCATGGGAGAAGCCACACTaGATCCCATGTGGCCTCTAT +
Preference number: 2 (lower is better)
Translates to: LYGAPTGMSIISQACLAPWEKPH*IPCGLY
Trigger: ATAGAGGCCACATGGGATGCAGTGTGGCTTCTCCCA...TGGGGCCAGGCATGCCTGCGAAATGATTGACATTCCTGTAGGTGCCCCATAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR-3UTR GCA 90 bp GAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAGAACTGTAAAATGGCTCACTCATCCCCTGTGCGGCTaGATCTCCCTTCCTCCTGCG +
Preference number: 2 (lower is better)
Translates to: EVQVRNRARLWRTVKWLTHPLCG*ISLPPA
Trigger: CGCAGGAGGAAGGGAGATGCAGCCGCACAGGGGATG...AGTGAGCCATTTTACAGTTCTCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR GCA 90 bp AGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACACCACCGGTAATCATCCCCTGTaGGGCTGCATCTCCCTTCCT +
Preference number: 2 (lower is better)
Translates to: SAKISCDTRTLGQSHNTTGNHPL*GCISLP
Trigger: AGGAAGGGAGATGCAGCCGCACAGGGGATGATTACC...GGTGGTGTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CCA 90 bp AGAAAGCAACCCTGTGGCCCTGTTGACCACCTAGTCCGGGAGAGTGTGGAGGTACAGCATCAGGACCCCTaGAGTGGCTTTCAAACTTAC +
Preference number: 2 (lower is better)
Translates to: RKQPCGPVDHLVRESVEVQHQDP*SGFQTY
Trigger: GTAAGTTTGAAAGCCACTCCAGGGGTCCTGATGCTG...TACCTCCACACTCTCCCGGACTAGGTGGTCAACAGGGCCACAGGGTTGCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR CAA 90 bp CTGTGGGCCGAACTCAGGAGGAGCCCTAAAGCTAAGCCCTTGGGCTaGACAGCTCTACTTTTCACCTCTAACTACCACTGTGCCAATGAG +
Preference number: 2 (lower is better)
Translates to: LWAELRRSPKAKPLG*TALLFTSNYHCANE
Trigger: CTCATTGGCACAGTGGTAGTTAGAGGTGAAAAGTAGAGCTGTCAAGCCCAAGGGCTTAGCTTTAGGGCTCCTCCTGAGTTCGGCCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR CAA 90 bp CTTCTACTGTGGGCCGAACTCAGGAGGAGCCCTAAAGCTAAGCCCTaGGGCTTGACAGCTCTACTTTTCACCTCTAACTACCACTGTGCC +
Preference number: 2 (lower is better)
Translates to: LLLWAELRRSPKAKP*GLTALLFTSNYHCA
Trigger: GGCACAGTGGTAGTTAGAGGTGAAAAGTAGAGCTGTCAAGCCCAAGGGCTTAGCTTTAGGGCTCCTCCTGAGTTCGGCCCACAGTAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR GCA 90 bp AATGTCAATCATTTCGCAGGCATGCCTGGCCCCAAATGCATGACTGGATGTGGACGTCTCCTGGCAGACTaGCCACTGAGAGGAGGTATG +
Preference number: 2 (lower is better)
Translates to: NVNHFAGMPGPKCMTGCGRLLAD*PLRGGM
Trigger: CATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACG...TCCACATCCAGTCATGCATTTGGGGCCAGGCATGCCTGCGAAATGATTGACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR-3UTR TCA 90 bp CTACTGTGGGCCGAACTCAGGAGGAGCCCTAAAGCTAAGCCCTTGGGCTTGACACCTTTGAAGAGTAGTTaGGAGTCATCTAGGGCTATG +
Preference number: 2 (lower is better)
Translates to: LLWAELRRSPKAKPLGLTPLKSS*ESSRAM
Trigger: CATAGCCCTAGATGACTCTCAACTACTCTTCAAAGG...TGTCAAGCCCAAGGGCTTAGCTTTAGGGCTCCTCCTGAGTTCGGCCCACAGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR GCA 90 bp CTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGGGATAAGGTCGGATAGTCCAAGATaGAGCATTAGAGTTGGGTTT +
Preference number: 2 (lower is better)
Translates to: LPLTSPGRLPTERRYGIRSDSPR*SIRVGF
Trigger: AAACCCAACTCTAATGCTGCATCTTGGACTATCCGA...CCTTATCCCATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
3UTR-3UTR CCA 90 bp CAAAGACACCAGAAGACAAGGGGGTCTTGTTTGAGTGTGCTAGGGGAACCTTCTCTGAGCCTTGAGTTGTaGAGTGCTTGGGGGTGGATC +
Preference number: 2 (lower is better)
Translates to: QRHQKTRGSCLSVLGEPSLSLEL*SAWGWI
Trigger: GATCCACCCCCAAGCACTCCACAACTCAAGGCTCAG...AGAAGGTTCCCCTAGCACACTCAAACAAGACCCCCTTGTCTTCTGGTGTCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR-3UTR CCA 90 bp GTGCCGAGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACTACACTGCTCAGCCTTaGCCCTCATATGATCACAGA +
Preference number: 2 (lower is better)
Translates to: VPSAKISCDTRTLGQSHNYTAQP*PSYDHR
Trigger: TCTGTGATCATATGAGGGCCAAGGCTGAGCAGTGTA...GTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACTCGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR CAA 90 bp AAACAAGCGAACCAGTCTCTGGAACAAAACCAGCTGAGCCTTGAGTaGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCAAGATGC +
Preference number: 2 (lower is better)
Translates to: KQANQSLEQNQLSLE*WSAWGWISSDSPRC
Trigger: GCATCTTGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAGAGACTGGTTCGCTTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
3UTR CAA 90 bp CACTCGGGTAGCAGGACTCATTCCTTTAATAGGATCAGCAGTGAGTaGGGGTACTTGGGAATGGAGCCATCGGGGTTAGGGAAAGAGGAA +
Preference number: 2 (lower is better)
Translates to: HSGSRTHSFNRISSE*GYLGMEPSGLGKEE
Trigger: TTCCTCTTTCCCTAACCCCGATGGCTCCATTCCCAAGTACCCCAACTCACTGCTGATCCTATTAAAGGAATGAGTCCTGCTACCCGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR TCA 90 bp CTACTGTGGGCCGAACTCAGGAGGAGCCCTAAAGCTAAGCCCTTGGGCTTGACAAACAAAATAGAACTGTaGCCCCAAAGAGATGAGCTC +
Preference number: 2 (lower is better)
Translates to: LLWAELRRSPKAKPLGLTNKIEL*PQRDEL
Trigger: GAGCTCATCTCTTTGGGGTCACAGTTCTATTTTGTT...TGTCAAGCCCAAGGGCTTAGCTTTAGGGCTCCTCCTGAGTTCGGCCCACAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR GCA 90 bp CAAGGAGATGGGTCAGCTAGCCTACCCACAGATAAAGATAACAAACACACCAAGACACAGCCCCGTTCCTaGAATGACTTAGCCACCGCG +
Preference number: 2 (lower is better)
Translates to: QGDGSASLPTDKDNKHTKTQPRS*NDLATA
Trigger: CGCGGTGGCTAAGTCATTGCAGGAACGGGGCTGTGT...CTTGGTGTGTTTGTTATCTTTATCTGTGGGTAGGCTAGCTGACCCATCTCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR GCA 90 bp GAGTGGCTTTCAAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGAACACAGCCCCGTTCCTaGAATGACTTAGCCACCGCG +
Preference number: 2 (lower is better)
Translates to: EWLSNLPSSAGYFWKSLGTQPRS*NDLATA
Trigger: CGCGGTGGCTAAGTCATTGCAGGAACGGGGCTGTGT...TCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CCA 90 bp GAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAGAACTGTAAAATGGCTCACTGTGAGTTGGGGTACTTaGGAATGGAGCCATCGGGGT +
Preference number: 2 (lower is better)
Translates to: EVQVRNRARLWRTVKWLTVSWGT*EWSHRG
Trigger: ACCCCGATGGCTCCATTCCCAAGTACCCCAACTCAC...AGTGAGCCATTTTACAGTTCTCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CCA 90 bp CTACTGTGGGCCGAACTCAGGAGGAGCCCTAAAGCTAAGCCCTTGGGCTTGACAAGACAAATGAAATCGTaGGTGACCACAGCAGCAAAA +
Preference number: 2 (lower is better)
Translates to: LLWAELRRSPKAKPLGLTRQMKS*VTTAAK
Trigger: TTTTGCTGCTGTGGTCACCCACGATTTCATTTGTCT...TGTCAAGCCCAAGGGCTTAGCTTTAGGGCTCCTCCTGAGTTCGGCCCACAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR CAA 90 bp TTAGGGCTGGAGAGGTGGTTCCGCAGACACCCAGTGGCTGTTATCTaGACATTTCAAAGACACCAGAAGACAAGGGGGTCTTGTTTGAGT +
Preference number: 2 (lower is better)
Translates to: LGLERWFRRHPVAVI*TFQRHQKTRGSCLS
Trigger: ACTCAAACAAGACCCCCTTGTCTTCTGGTGTCTTTGAAATGTCAAGATAACAGCCACTGGGTGTCTGCGGAACCACCTCTCCAGCCCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR-3UTR TCA 90 bp CTCTATGGGGCACCTACAGGAATGTCAATCATTTCGCAGGCATGCCTGGCCCCACAGTGGCTGTTATCTTaGCATTTCAAAGACACCAGA +
Preference number: 2 (lower is better)
Translates to: LYGAPTGMSIISQACLAPQWLLS*HFKDTR
Trigger: TCTGGTGTCTTTGAAATGTCAAGATAACAGCCACTG...TGGGGCCAGGCATGCCTGCGAAATGATTGACATTCCTGTAGGTGCCCCATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR-3UTR TCA 90 bp GAGAAAGCGGAGAATAATGATCACTGCTCCACTTCTATTCTGGAAAAGTCATTCGCCCCGTTCCTGCAATaGCTTAGCCACCGCGGTCCT +
Preference number: 2 (lower is better)
Translates to: EKAENNDHCSTSILEKSFAPFLQ*LSHRGP
Trigger: AGGACCGCGGTGGCTAAGTCATTGCAGGAACGGGGC...GAATGACTTTTCCAGAATAGAAGTGGAGCAGTGATCATTATTCTCCGCTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR TCA 90 bp CTCAAGGCTGAAGCAGCATGGTTAAGCATTCTTGTCCACAGTACTTGCGGACTTGTGACCCCAAAGAGATaGGCTCCTGTTTTGTCCCAG +
Preference number: 2 (lower is better)
Translates to: LKAEAAWLSILVHSTCGLVTPKR*APVLSQ
Trigger: CTGGGACAAAACAGGAGCTCATCTCTTTGGGGTCAC...AAGTCCGCAAGTACTGTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR TCA 90 bp GAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAGAACTGTAAAATGGCTCACTCTTCCCGTCCAGTGGTaGCCAGTTACAATAACTCGC +
Preference number: 2 (lower is better)
Translates to: EVQVRNRARLWRTVKWLTLPVQW*PVTITR
Trigger: GCGAGTTATTGTAACTGGTCACCACTGGACGGGAAG...AGTGAGCCATTTTACAGTTCTCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR TCA 90 bp TCAAGTTCCCGTGATCTGGCTCAGCCAGTGAATGGTCGAATACCTCTAACTGCATCACAACACCACCACTaGGTCCCACATGACCATTCA +
Preference number: 2 (lower is better)
Translates to: SSSRDLAQPVNGRIPLTASQHHH*VPHDHS
Trigger: TGAATGGTCATGTGGGACTCAGTGGTGGTGTTGTGA...TGCAGTTAGAGGTATTCGACCATTCACTGGCTGAGCCAGATCACGGGAACTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR TCA 90 bp CAAGGAGATGGGTCAGCTAGCCTACCCACAGATAAAGATAACAAACACACCAAGTGCCAAGATCAGCTGTaGCACTCGGACCCTAGGTCA +
Preference number: 2 (lower is better)
Translates to: QGDGSASLPTDKDNKHTKCQDQL*HSDPRS
Trigger: TGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCA...CTTGGTGTGTTTGTTATCTTTATCTGTGGGTAGGCTAGCTGACCCATCTCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR TCA 90 bp CAAGGAGATGGGTCAGCTAGCCTACCCACAGATAAAGATAACAAACACACCAAGCTACCACTGTGCCAATaGGTGCCGAGTGCCAAGATC +
Preference number: 2 (lower is better)
Translates to: QGDGSASLPTDKDNKHTKLPLCQ*VPSAKI
Trigger: GATCTTGGCACTCGGCACTCATTGGCACAGTGGTAG...CTTGGTGTGTTTGTTATCTTTATCTGTGGGTAGGCTAGCTGACCCATCTCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR TCA 90 bp CAAGGAGATGGGTCAGCTAGCCTACCCACAGATAAAGATAACAAACACACCAAGCGCATCATGGGAGGGTaGAGAGGAAAAGGGGCTAGT +
Preference number: 2 (lower is better)
Translates to: QGDGSASLPTDKDNKHTKRIMGG*RGKGAS
Trigger: ACTAGCCCCTTTTCCTCTTCACCCTCCCATGATGCG...CTTGGTGTGTTTGTTATCTTTATCTGTGGGTAGGCTAGCTGACCCATCTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR GCA 90 bp AGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACACCACCCTTGTCCACAGTACTTaGGGACTTCTGGTTAGAATC +
Preference number: 2 (lower is better)
Translates to: SAKISCDTRTLGQSHNTTLVHST*GLLVRI
Trigger: GATTCTAACCAGAAGTCCGCAAGTACTGTGGACAAG...GGTGGTGTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CCA 90 bp GAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGCTTTCTCGTTTGTTTTaGGTGCTGTTCTTGCTTCGG +
Preference number: 2 (lower is better)
Translates to: EQNQLSLELWSAWGWISSLSRLF*VLFLLR
Trigger: CCGAAGCAAGAACAGCACCCAAAACAAACGAGAAAG...CGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
3UTR-3UTR CCA 90 bp CTCAAGGCTGAAGCAGCATGGTTAAGCATTCTTGTCCACAGTACTTGCGGACTTCCCAGCCCCTCTTGCTaGAATGAAACGTCAGATAGG +
Preference number: 2 (lower is better)
Translates to: LKAEAAWLSILVHSTCGLPSPSC*NETSDR
Trigger: CCTATCTGACGTTTCATTCCAGCAAGAGGGGCTGGG...AAGTCCGCAAGTACTGTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CCA 90 bp CTCTGTTCTCCTTCCCGTCCAGTGGTGACCAGTTACAATAACTCGCTGATGGGGAAGACAATCAGAGGATaGGATAAGCTGGACGGCTTT +
Preference number: 2 (lower is better)
Translates to: LCSPSRPVVTSYNNSLMGKTIRG*DKLDGF
Trigger: AAAGCCGTCCAGCTTATCCCATCCTCTGATTGTCTT...CCCCATCAGCGAGTTATTGTAACTGGTCACCACTGGACGGGAAGGAGAACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CCA 90 bp CATTCACCCTTCCCCTTTCACCTGGGTATAAGACAAATGAAATCGTGGGTGACCGCTTGTAGGGTTGGCTaGCAGAACCTACACCACAGT +
Preference number: 2 (lower is better)
Translates to: HSPFPFHLGIRQMKSWVTACRVG*QNLHHS
Trigger: ACTGTGGTGTAGGTTCTGCCAGCCAACCCTACAAGC...GGTCACCCACGATTTCATTTGTCTTATACCCAGGTGAAAGGGGAAGGGTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CCA 90 bp AGAAAGCAACCCTGTGGCCCTGTTGACCACCTAGTCCGGGAGAGTGTGGAGGTAAATAAAAACATAAATTaGTGTGCATGCGTGCGTGCG +
Preference number: 2 (lower is better)
Translates to: RKQPCGPVDHLVRESVEVNKNIN*CACVRA
Trigger: CGCACGCACGCATGCACACCAATTTATGTTTTTATT...TACCTCCACACTCTCCCGGACTAGGTGGTCAACAGGGCCACAGGGTTGCTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CCA 90 bp CATTCACCCTTCCCCTTTCACCTGGGTATAAGACAAATGAAATCGTGGGTGACCGGATCAGCAGTGAGTTaGGGTACTTGGGAATGGAGC +
Preference number: 2 (lower is better)
Translates to: HSPFPFHLGIRQMKSWVTGSAVS*GTWEWS
Trigger: GCTCCATTCCCAAGTACCCCAACTCACTGCTGATCC...GGTCACCCACGATTTCATTTGTCTTATACCCAGGTGAAAGGGGAAGGGTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CCA 90 bp GTGCCGAGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACAGACAAATGAAATCGTaGGTGACCACAGCAGCAAAA +
Preference number: 2 (lower is better)
Translates to: VPSAKISCDTRTLGQSHNRQMKS*VTTAAK
Trigger: TTTTGCTGCTGTGGTCACCCACGATTTCATTTGTCT...GTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACTCGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR TCA 90 bp CTCTGTTCTCCTTCCCGTCCAGTGGTGACCAGTTACAATAACTCGCTGATGGGGCGCTTCTATGGATTTTaGCGTGTGAAGTTTCCTTTC +
Preference number: 2 (lower is better)
Translates to: LCSPSRPVVTSYNNSLMGRFYGF*RVKFPF
Trigger: GAAAGGAAACTTCACACGTCAAAATCCATAGAAGCG...CCCCATCAGCGAGTTATTGTAACTGGTCACCACTGGACGGGAAGGAGAACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR GCA 90 bp TTTCCAGCACACAGGCAATCCTTAGGCGTTAATATGAAATCAAGATTTGGATCTCATCCCCTGTGCGGCTaGATCTCCCTTCCTCCTGCG +
Preference number: 2 (lower is better)
Translates to: FPAHRQSLGVNMKSRFGSHPLCG*ISLPPA
Trigger: CGCAGGAGGAAGGGAGATGCAGCCGCACAGGGGATG...AGATCCAAATCTTGATTTCATATTAACGCCTAAGGATTGCCTGTGTGCTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR GCA 90 bp GAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAGAACTGTAAAATGGCTCACTCAGCTTTCTGAACACTaGGCATCATGGGAGGGTGAA +
Preference number: 2 (lower is better)
Translates to: EVQVRNRARLWRTVKWLTQLSEH*ASWEGE
Trigger: TTCACCCTCCCATGATGCGCAGTGTTCAGAAAGCTG...AGTGAGCCATTTTACAGTTCTCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CCA 90 bp TCAAGTTCCCGTGATCTGGCTCAGCCAGTGAATGGTCGAATACCTCTAACTGCAGATCAATACTGGCAGTaGGGTTTCCCAAAGGGAATG +
Preference number: 2 (lower is better)
Translates to: SSSRDLAQPVNGRIPLTADQYWQ*GFPKGM
Trigger: CATTCCCTTTGGGAAACCCCACTGCCAGTATTGATC...TGCAGTTAGAGGTATTCGACCATTCACTGGCTGAGCCAGATCACGGGAACTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR CAA 90 bp TCTCCACTCCCCGTTTCTCCATCTTCAGCTGAGGTAGGACACTTCTaGAAATCTCAAGGTAGCACATGCTCTAGCCTTTCATCTTGCCTT +
Preference number: 2 (lower is better)
Translates to: SPLPVSPSSAEVGHF*KSQGSTCSSLSSCL
Trigger: AAGGCAAGATGAAAGGCTAGAGCATGTGCTACCTTGAGATTTCAAGAAGTGTCCTACCTCAGCTGAAGATGGAGAAACGGGGAGTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR CAA 90 bp AGCAGGACTCATTCCTTTAATAGGATCAGCAGTGAGTTGGGGTACTaGGGAATGGAGCCATCGGGGTTAGGGAAAGAGGAATGCCTTAAT +
Preference number: 2 (lower is better)
Translates to: SRTHSFNRISSELGY*GMEPSGLGKEECLN
Trigger: ATTAAGGCATTCCTCTTTCCCTAACCCCGATGGCTCCATTCCCAAGTACCCCAACTCACTGCTGATCCTATTAAAGGAATGAGTCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR TCA 90 bp GTGCCGAGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACTTGCTTTTCAAGTGTTaGTTAGAAAGAGAAAGCGGA +
Preference number: 2 (lower is better)
Translates to: VPSAKISCDTRTLGQSHNLLFKC*LERESG
Trigger: TCCGCTTTCTCTTTCTAATCAACACTTGAAAAGCAA...GTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACTCGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR GCA 90 bp AATGTCAATCATTTCGCAGGCATGCCTGGCCCCAAATGCATGACTGGATGTGGAAACATGAGACAGATTTaGTTTAGGGCTGGAGAGGTG +
Preference number: 2 (lower is better)
Translates to: NVNHFAGMPGPKCMTGCGNMRQI*FRAGEV
Trigger: CACCTCTCCAGCCCTAAAGCAAATCTGTCTCATGTT...TCCACATCCAGTCATGCATTTGGGGCCAGGCATGCCTGCGAAATGATTGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR-3UTR GCA 90 bp GAGTGGCTTTCAAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGATTCCCCAGCCCCTCTTaGTGGAATGAAACGTCAGAT +
Preference number: 2 (lower is better)
Translates to: EWLSNLPSSAGYFWKSLGFPSPS*WNETSD
Trigger: ATCTGACGTTTCATTCCAGCAAGAGGGGCTGGGGAA...TCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CCA 90 bp CAAGGAGATGGGTCAGCTAGCCTACCCACAGATAAAGATAACAAACACACCAAGCAGCATCAGGACCCCTaGAGTGGCTTTCAAACTTAC +
Preference number: 2 (lower is better)
Translates to: QGDGSASLPTDKDNKHTKQHQDP*SGFQTY
Trigger: GTAAGTTTGAAAGCCACTCCAGGGGTCCTGATGCTG...CTTGGTGTGTTTGTTATCTTTATCTGTGGGTAGGCTAGCTGACCCATCTCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CCA 90 bp TCAAGTTCCCGTGATCTGGCTCAGCCAGTGAATGGTCGAATACCTCTAACTGCATGGAGAACTGTAAAATaGCTCACTGAGCATGACAGC +
Preference number: 2 (lower is better)
Translates to: SSSRDLAQPVNGRIPLTAWRTVK*LTEHDS
Trigger: GCTGTCATGCTCAGTGAGCCATTTTACAGTTCTCCA...TGCAGTTAGAGGTATTCGACCATTCACTGGCTGAGCCAGATCACGGGAACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR TCA 90 bp TCAAGTTCCCGTGATCTGGCTCAGCCAGTGAATGGTCGAATACCTCTAACTGCAAACAAAATAGAACTGTaGCCCCAAAGAGATGAGCTC +
Preference number: 2 (lower is better)
Translates to: SSSRDLAQPVNGRIPLTANKIEL*PQRDEL
Trigger: GAGCTCATCTCTTTGGGGTCACAGTTCTATTTTGTT...TGCAGTTAGAGGTATTCGACCATTCACTGGCTGAGCCAGATCACGGGAACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR TCA 90 bp CAAGGAGATGGGTCAGCTAGCCTACCCACAGATAAAGATAACAAACACACCAAGCCACTGAGTCCCACATaGCCATTCACATACACAGTA +
Preference number: 2 (lower is better)
Translates to: QGDGSASLPTDKDNKHTKPLSPT*PFTYTV
Trigger: TACTGTGTATGTGAATGGTCATGTGGGACTCAGTGG...CTTGGTGTGTTTGTTATCTTTATCTGTGGGTAGGCTAGCTGACCCATCTCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR TCA 90 bp AAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTCTAAGCCCTTGGGCTTaGCAGCTCTACTTTTCACCT +
Preference number: 2 (lower is better)
Translates to: KLTFFCRLLLEIPRTYQLLSPWA*QLYFSP
Trigger: AGGTGAAAAGTAGAGCTGTCAAGCCCAAGGGCTTAG...AAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR GCA 90 bp TGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGTCGAGGCAACATGTTTaGAGTCTTTCTCGTTTGTTT +
Preference number: 2 (lower is better)
Translates to: WLGLIRVLRVGDPGKRCLSRQHV*SLSRLF
Trigger: AAACAAACGAGAAAGACTGCAAACATGTTGCCTCGA...CAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
3UTR-3UTR GCA 90 bp AAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTTCCCCAGCCCCTCTTaGTGGAATGAAACGTCAGAT +
Preference number: 2 (lower is better)
Translates to: KLTFFCRLLLEIPRTYQLFPSPS*WNETSD
Trigger: ATCTGACGTTTCATTCCAGCAAGAGGGGCTGGGGAA...AAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR GCA 90 bp GAGAAAGCGGAGAATAATGATCACTGCTCCACTTCTATTCTGGAAAAGTCATTCGGTAATCATCCCCTGTaGGGCTGCATCTCCCTTCCT +
Preference number: 2 (lower is better)
Translates to: EKAENNDHCSTSILEKSFGNHPL*GCISLP
Trigger: AGGAAGGGAGATGCAGCCGCACAGGGGATGATTACC...GAATGACTTTTCCAGAATAGAAGTGGAGCAGTGATCATTATTCTCCGCTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR GCA 90 bp GCAGGACTCATTCCTTTAATAGGATCAGCAGTGAGTTGGGGTACTTGGGAATGGGAGAATATCACACAATaGTGCTTCCAGGGGCTTAGA +
Preference number: 2 (lower is better)
Translates to: AGLIPLIGSAVSWGTWEWENITQ*CFQGLR
Trigger: TCTAAGCCCCTGGAAGCAGCATTGTGTGATATTCTC...CCATTCCCAAGTACCCCAACTCACTGCTGATCCTATTAAAGGAATGAGTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CCA 90 bp GTCCAGGCGCTTCTATGGATTTTGACGTGTGAAGTTTCCTTTCCAGTTTGTTTTCCCAGCCCCTCTTGCTaGAATGAAACGTCAGATAGG +
Preference number: 2 (lower is better)
Translates to: VQALLWILTCEVSFPVCFPSPSC*NETSDR
Trigger: CCTATCTGACGTTTCATTCCAGCAAGAGGGGCTGGG...AAAACAAACTGGAAAGGAAACTTCACACGTCAAAATCCATAGAAGCGCCTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CCA 90 bp GAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAGAACTGTAAAATGGCTCACTGTCCAGGCGCTTCTATaGATTTTGACGTGTGAAGTT +
Preference number: 2 (lower is better)
Translates to: EVQVRNRARLWRTVKWLTVQALL*ILTCEV
Trigger: AACTTCACACGTCAAAATCCATAGAAGCGCCTGGAC...AGTGAGCCATTTTACAGTTCTCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR TCA 90 bp GAGAAAGCGGAGAATAATGATCACTGCTCCACTTCTATTCTGGAAAAGTCATTCGTGACCCCAAAGAGATaGGCTCCTGTTTTGTCCCAG +
Preference number: 2 (lower is better)
Translates to: EKAENNDHCSTSILEKSFVTPKR*APVLSQ
Trigger: CTGGGACAAAACAGGAGCTCATCTCTTTGGGGTCAC...GAATGACTTTTCCAGAATAGAAGTGGAGCAGTGATCATTATTCTCCGCTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR TCA 90 bp GTTGTACATAACTTAGAGGTGAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAATTTTCCCCTGCCTCTaGGAATATCACACAATGCTG +
Preference number: 2 (lower is better)
Translates to: VVHNLEVKCRSETGLDFGIFPCL*EYHTML
Trigger: CAGCATTGTGTGATATTCTCAGAGGCAGGGGAAAAT...TCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTCACCTCTAAGTTATGTACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR TCA 90 bp GTTGTACATAACTTAGAGGTGAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAACTCTCCCGAAAGGTTaGAATGGTGTTTGTAACCCA +
Preference number: 2 (lower is better)
Translates to: VVHNLEVKCRSETGLDFGTLPKG*NGVCNP
Trigger: TGGGTTACAAACACCATTTCAACCTTTCGGGAGAGT...TCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTCACCTCTAAGTTATGTACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CCA 90 bp GAGTGGCTTTCAAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGAAAGACAATCAGAGGATaGGATAAGCTGGACGGCTTT +
Preference number: 2 (lower is better)
Translates to: EWLSNLPSSAGYFWKSLGKTIRG*DKLDGF
Trigger: AAAGCCGTCCAGCTTATCCCATCCTCTGATTGTCTT...TCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CCA 90 bp GAGTGGCTTTCAAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGAGTCCAGGCGCTTCTATaGATTTTGACGTGTGAAGTT +
Preference number: 2 (lower is better)
Translates to: EWLSNLPSSAGYFWKSLGVQALL*ILTCEV
Trigger: AACTTCACACGTCAAAATCCATAGAAGCGCCTGGAC...TCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CCA 90 bp GTTGTACATAACTTAGAGGTGAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAAAGGCTGAAGCAGCATaGTTAAGCATTCTTGTCCAC +
Preference number: 2 (lower is better)
Translates to: VVHNLEVKCRSETGLDFGKAEAA*LSILVH
Trigger: GTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTT...TCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTCACCTCTAAGTTATGTACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CCA 90 bp AGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACACCACCATAGGCTGGGCATACTaGTTGAGTTTCAAATATATT +
Preference number: 2 (lower is better)
Translates to: SAKISCDTRTLGQSHNTTIGWAY*LSFKYI
Trigger: AATATATTTGAAACTCAACCAGTATGCCCAGCCTAT...GGTGGTGTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR CAA 90 bp TGTTGCTTAGAGAAGACACATGAGCAGCAATGGTTACATCTTCATTaGACCTTCTCTGTGATGATGCGGCAACATCTGAATATGCCAGGC +
Preference number: 2 (lower is better)
Translates to: CCLEKTHEQQWLHLH*TFSVMMRQHLNMPG
Trigger: GCCTGGCATATTCAGATGTTGCCGCATCATCACAGAGAAGGTCAAATGAAGATGTAACCATTGCTGCTCATGTGTCTTCTCTAAGCAACA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR-3UTR TCA 90 bp GAATCATCAGGGTATATGGTAACTCAGCTGGTCACTACACTGGCTGTATTTTCCCGGGAAAGAGATGTCTaGGAGTTCACACAGAAACTA +
Preference number: 2 (lower is better)
Translates to: ESSGYMVTQLVTTLAVFSRERDV*EFTQKL
Trigger: TAGTTTCTGTGTGAACTCTCAGACATCTCTTTCCCG...GGAAAATACAGCCAGTGTAGTGACCAGCTGAGTTACCATATACCCTGATGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR-3UTR TCA 90 bp TGTTATCTTGACATTTCAAAGACACCAGAAGACAAGGGGGTCTTGTTTGAGTGTCAAACACACACACAATaGACCAGCCGCTCTCTCACA +
Preference number: 2 (lower is better)
Translates to: CYLDISKTPEDKGVLFECQTHTQ*TSRSLT
Trigger: TGTGAGAGAGCGGCTGGTTCATTGTGTGTGTGTTTG...ACACTCAAACAAGACCCCCTTGTCTTCTGGTGTCTTTGAAATGTCAAGATAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR-3UTR TCA 90 bp AGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTCTGAACACTGCGCATCATATTCTGGATCGGTTTaGTCGAGATTATGGCATTCA +
Preference number: 2 (lower is better)
Translates to: RLLLEIPRTYQLSEHCASYSGSV*SRLWHS
Trigger: TGAATGCCATAATCTCGATCAAACCGATCCAGAATA...TGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR TCA 90 bp TGGATCTTGATGCGAACAATCTTATCCTTCACACAGTTTCATTCTATTCCTGATGCCTTGGCCCTCATATaGTCACAGAGGTTGGGCTTC +
Preference number: 2 (lower is better)
Translates to: WILMRTILSFTQFHSIPDALALI*SQRLGF
Trigger: GAAGCCCAACCTCTGTGATCATATGAGGGCCAAGGC...ATCAGGAATAGAATGAAACTGTGTGAAGGATAAGATTGTTCGCATCAAGATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR GCA 90 bp CCACCAGACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGTCTGCCTCTTTGAGTTaGTCACAGACCAAAGAAATA +
Preference number: 2 (lower is better)
Translates to: PPDTVGLELANGSYSLTKSASLS*SQTKEI
Trigger: TATTTCTTTGGTCTGTGAGCAACTCAAAGAGGCAGA...CTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTCTGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR GCA 90 bp CTCAAGGCTGAAGCAGCATGGTTAAGCATTCTTGTCCACAGTACTTGCGGACTTTCTGCCTCTTTGAGTTaGTCACAGACCAAAGAAATA +
Preference number: 2 (lower is better)
Translates to: LKAEAAWLSILVHSTCGLSASLS*SQTKEI
Trigger: TATTTCTTTGGTCTGTGAGCAACTCAAAGAGGCAGA...AAGTCCGCAAGTACTGTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR GCA 90 bp GACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGCACTTTGTCATTCTCCTCTTCTaGCTCTTTGAGTTGCTCACA +
Preference number: 2 (lower is better)
Translates to: DTVGLELANGSYSLTKHFVILLF*LFELLT
Trigger: TGTGAGCAACTCAAAGAGGCAGAAGAGGAGAATGAC...AAAGTGCTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR GCA 90 bp AAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTAATATCACACAATGCTaGTTCCAGGGGCTTAGAGAC +
Preference number: 2 (lower is better)
Translates to: KLTFFCRLLLEIPRTYQLNITQC*FQGLRD
Trigger: GTCTCTAAGCCCCTGGAAGCAGCATTGTGTGATATT...AAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR GCA 90 bp GCAAACCCTGAAAAAGTTAACCTGCTATGTGACAGGTTAACTCTTTCCCTTGTTCAGCTTTCTGAACACTaGGCATCATGGGAGGGTGAA +
Preference number: 2 (lower is better)
Translates to: ANPEKVNLLCDRLTLSLVQLSEH*ASWEGE
Trigger: TTCACCCTCCCATGATGCGCAGTGTTCAGAAAGCTG...AACAAGGGAAAGAGTTAACCTGTCACATAGCAGGTTAACTTTTTCAGGGTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CCA 90 bp AGACAGGGTCTTCTTAAAGATCGGCTATCAACTTCAGAAATAGTACTGTATTTCTTTCGCAGGCATGCCTaGCCCCAAATGCATGACTGG +
Preference number: 2 (lower is better)
Translates to: RQGLLKDRLSTSEIVLYFFRRHA*PQMHDW
Trigger: CCAGTCATGCATTTGGGGCCAGGCATGCCTGCGAAA...GAAATACAGTACTATTTCTGAAGTTGATAGCCGATCTTTAAGAAGACCCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR-3UTR CCA 90 bp AGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTCTGAACACTGCGCATCAATACCTTCGGTATTCTaGATCGGTTTGATCGAGATT +
Preference number: 2 (lower is better)
Translates to: RLLLEIPRTYQLSEHCASIPSVF*IGLIEI
Trigger: AATCTCGATCAAACCGATCCAGAATACCGAAGGTAT...TGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CCA 90 bp AGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTCTGAACACTGCGCATCAGCTCCACTTCTATTCTaGAAAAGTCATTCTCCTCTT +
Preference number: 2 (lower is better)
Translates to: RLLLEIPRTYQLSEHCASAPLLF*KSHSPL
Trigger: AAGAGGAGAATGACTTTTCCAGAATAGAAGTGGAGC...TGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CCA 90 bp TTTCCAGCACACAGGCAATCCTTAGGCGTTAATATGAAATCAAGATTTGGATCTGGATCAGCAGTGAGTTaGGGTACTTGGGAATGGAGC +
Preference number: 2 (lower is better)
Translates to: FPAHRQSLGVNMKSRFGSGSAVS*GTWEWS
Trigger: GCTCCATTCCCAAGTACCCCAACTCACTGCTGATCC...AGATCCAAATCTTGATTTCATATTAACGCCTAAGGATTGCCTGTGTGCTGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR TCA 90 bp TGGATCTTGATGCGAACAATCTTATCCTTCACACAGTTTCATTCTATTCCTGATCTTCCCGTCCAGTGGTaGCCAGTTACAATAACTCGC +
Preference number: 2 (lower is better)
Translates to: WILMRTILSFTQFHSIPDLPVQW*PVTITR
Trigger: GCGAGTTATTGTAACTGGTCACCACTGGACGGGAAG...ATCAGGAATAGAATGAAACTGTGTGAAGGATAAGATTGTTCGCATCAAGATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR GCA 90 bp CCAGAAACCAAAATGAACCCAAGGAGGATGGTTGGGATTGATAAGAGTGCTCAGTCGAGGCAACATGTTTaGAGTCTTTCTCGTTTGTTT +
Preference number: 2 (lower is better)
Translates to: PETKMNPRRMVGIDKSAQSRQHV*SLSRLF
Trigger: AAACAAACGAGAAAGACTGCAAACATGTTGCCTCGA...CTGAGCACTCTTATCAATCCCAACCATCCTCCTTGGGTTCATTTTGGTTTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
3UTR-3UTR GCA 90 bp CATTCACCCTTCCCCTTTCACCTGGGTATAAGACAAATGAAATCGTGGGTGACCGAGAATAATGATCACTaGTCCACTTCTATTCTGGAA +
Preference number: 2 (lower is better)
Translates to: HSPFPFHLGIRQMKSWVTENNDH*STSILE
Trigger: TTCCAGAATAGAAGTGGAGCAGTGATCATTATTCTC...GGTCACCCACGATTTCATTTGTCTTATACCCAGGTGAAAGGGGAAGGGTGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CCA 90 bp CAAGGAGATGGGTCAGCTAGCCTACCCACAGATAAAGATAACAAACACACCAAGGCTCCACTTCTATTCTaGAAAAGTCATTCTCCTCTT +
Preference number: 2 (lower is better)
Translates to: QGDGSASLPTDKDNKHTKAPLLF*KSHSPL
Trigger: AAGAGGAGAATGACTTTTCCAGAATAGAAGTGGAGC...CTTGGTGTGTTTGTTATCTTTATCTGTGGGTAGGCTAGCTGACCCATCTCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CCA 90 bp GAGTGGCTTTCAAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGAAATAAAAACATAAATTaGTGTGCATGCGTGCGTGCG +
Preference number: 2 (lower is better)
Translates to: EWLSNLPSSAGYFWKSLGNKNIN*CACVRA
Trigger: CGCACGCACGCATGCACACCAATTTATGTTTTTATT...TCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CCA 90 bp GCAAACCCTGAAAAAGTTAACCTGCTATGTGACAGGTTAACTCTTTCCCTTGTTTGGCCAAGTCAAAATTaGGCCCAGCGTCTTTCTTTC +
Preference number: 2 (lower is better)
Translates to: ANPEKVNLLCDRLTLSLVWPSQN*AQRLSF
Trigger: GAAAGAAAGACGCTGGGCCCAATTTTGACTTGGCCA...AACAAGGGAAAGAGTTAACCTGTCACATAGCAGGTTAACTTTTTCAGGGTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR CAA 90 bp CACTCACAAAGCACTTTAAGCCTCGTCCAGGCGCTTCTATGGATTTaGACGTGTGAAGTTTCCTTTCCAGTTTGTTTTAAATCGCATACA +
Preference number: 2 (lower is better)
Translates to: HSQSTLSLVQALLWI*TCEVSFPVCFKSHT
Trigger: TGTATGCGATTTAAAACAAACTGGAAAGGAAACTTCACACGTCAAAATCCATAGAAGCGCCTGGACGAGGCTTAAAGTGCTTTGTGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR TCA 90 bp TTCCTATTCAATTCTGGCTTTAATCCCAAAAATGTGGGACAAGGGAAAAGACAATGGAACAAAACCAGCTaGGCCTTGAGTTGTGGAGTG +
Preference number: 2 (lower is better)
Translates to: FLFNSGFNPKNVGQGKRQWNKTS*ALSCGV
Trigger: CACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCA...TTGTCTTTTCCCTTGTCCCACATTTTTGGGATTAAAGCCAGAATTGAATAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR-3UTR TCA 90 bp AGAGCAGTCTCATATTCTCAACTAAGGCATGTACATAAAGATGATGCCACTTGGGTTCTTTCGGGAGGATaGAACGAACCAGATGAGAAA +
Preference number: 2 (lower is better)
Translates to: RAVSYSQLRHVHKDDATWVLSGG*NEPDEK
Trigger: TTTCTCATCTGGTTCGTTTCATCCTCCCGAAAGAAC...CCAAGTGGCATCATCTTTATGTACATGCCTTAGTTGAGAATATGAGACTGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR-3UTR TCA 90 bp AAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTATTCTGGATCGGTTTaGTCGAGATTATGGCATTCA +
Preference number: 2 (lower is better)
Translates to: KLTFFCRLLLEIPRTYQLYSGSV*SRLWHS
Trigger: TGAATGCCATAATCTCGATCAAACCGATCCAGAATA...AAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR TCA 90 bp GCAAACCCTGAAAAAGTTAACCTGCTATGTGACAGGTTAACTCTTTCCCTTGTTACTCTCCCGAAAGGTTaGAATGGTGTTTGTAACCCA +
Preference number: 2 (lower is better)
Translates to: ANPEKVNLLCDRLTLSLVTLPKG*NGVCNP
Trigger: TGGGTTACAAACACCATTTCAACCTTTCGGGAGAGT...AACAAGGGAAAGAGTTAACCTGTCACATAGCAGGTTAACTTTTTCAGGGTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR GCA 90 bp AGAGCAGTCTCATATTCTCAACTAAGGCATGTACATAAAGATGATGCCACTTGGTCTCAAGGTAGCACATaGTCTAGCCTTTCATCTTGC +
Preference number: 2 (lower is better)
Translates to: RAVSYSQLRHVHKDDATWSQGST*SSLSSC
Trigger: GCAAGATGAAAGGCTAGAGCATGTGCTACCTTGAGA...CCAAGTGGCATCATCTTTATGTACATGCCTTAGTTGAGAATATGAGACTGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR-3UTR GCA 90 bp CAAGGAGATGGGTCAGCTAGCCTACCCACAGATAAAGATAACAAACACACCAAGGAGAATAATGATCACTaGTCCACTTCTATTCTGGAA +
Preference number: 2 (lower is better)
Translates to: QGDGSASLPTDKDNKHTKENNDH*STSILE
Trigger: TTCCAGAATAGAAGTGGAGCAGTGATCATTATTCTC...CTTGGTGTGTTTGTTATCTTTATCTGTGGGTAGGCTAGCTGACCCATCTCCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CCA 90 bp GACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGCACTTTATACCTTCGGTATTCTaGATCGGTTTGATCGAGATT +
Preference number: 2 (lower is better)
Translates to: DTVGLELANGSYSLTKHFIPSVF*IGLIEI
Trigger: AATCTCGATCAAACCGATCCAGAATACCGAAGGTAT...AAAGTGCTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CCA 90 bp GAGTGGCTTTCAAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGATCTAGAATTAGCGAATaGCTCCTATTCACTCACAAA +
Preference number: 2 (lower is better)
Translates to: EWLSNLPSSAGYFWKSLGSRISE*LLFTHK
Trigger: TTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGA...TCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CCA 90 bp GCAAACCCTGAAAAAGTTAACCTGCTATGTGACAGGTTAACTCTTTCCCTTGTTTTCATGCTTATTCCTTaGACCCTCATCCCTGTCAAC +
Preference number: 2 (lower is better)
Translates to: ANPEKVNLLCDRLTLSLVFMLIP*TLIPVN
Trigger: GTTGACAGGGATGAGGGTCCAAGGAATAAGCATGAA...AACAAGGGAAAGAGTTAACCTGTCACATAGCAGGTTAACTTTTTCAGGGTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CCA 90 bp GAGTGGCTTTCAAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGAATAGGCTGGGCATACTaGTTGAGTTTCAAATATATT +
Preference number: 2 (lower is better)
Translates to: EWLSNLPSSAGYFWKSLGIGWAY*LSFKYI
Trigger: AATATATTTGAAACTCAACCAGTATGCCCAGCCTAT...TCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR TCA 90 bp TTCCTATTCAATTCTGGCTTTAATCCCAAAAATGTGGGACAAGGGAAAAGACAATTCTCCATCTTCAGCTaGGGTAGGACACTTCTTGAA +
Preference number: 2 (lower is better)
Translates to: FLFNSGFNPKNVGQGKRQFSIFS*GRTLLE
Trigger: TTCAAGAAGTGTCCTACCTCAGCTGAAGATGGAGAA...TTGTCTTTTCCCTTGTCCCACATTTTTGGGATTAAAGCCAGAATTGAATAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR-3UTR TCA 90 bp TTTCCAGCACACAGGCAATCCTTAGGCGTTAATATGAAATCAAGATTTGGATCTCGCTTCTATGGATTTTaGCGTGTGAAGTTTCCTTTC +
Preference number: 2 (lower is better)
Translates to: FPAHRQSLGVNMKSRFGSRFYGF*RVKFPF
Trigger: GAAAGGAAACTTCACACGTCAAAATCCATAGAAGCG...AGATCCAAATCTTGATTTCATATTAACGCCTAAGGATTGCCTGTGTGCTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR GCA 90 bp TGGATCTTGATGCGAACAATCTTATCCTTCACACAGTTTCATTCTATTCCTGATAATATCACACAATGCTaGTTCCAGGGGCTTAGAGAC +
Preference number: 2 (lower is better)
Translates to: WILMRTILSFTQFHSIPDNITQC*FQGLRD
Trigger: GTCTCTAAGCCCCTGGAAGCAGCATTGTGTGATATT...ATCAGGAATAGAATGAAACTGTGTGAAGGATAAGATTGTTCGCATCAAGATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR TCA 90 bp TTCCTATTCAATTCTGGCTTTAATCCCAAAAATGTGGGACAAGGGAAAAGACAACAGAATTTTGCTTTTTaGAGCTGCGAAGCATGGCAT +
Preference number: 2 (lower is better)
Translates to: FLFNSGFNPKNVGQGKRQQNFAF*SCEAWH
Trigger: ATGCCATGCTTCGCAGCTTCAAAAAGCAAAATTCTG...TTGTCTTTTCCCTTGTCCCACATTTTTGGGATTAAAGCCAGAATTGAATAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR-3UTR CCA 90 bp AGACAGGGTCTTCTTAAAGATCGGCTATCAACTTCAGAAATAGTACTGTATTTCAGCTGGTCACTACACTaGCTGTATTTTCCAGACATA +
Preference number: 2 (lower is better)
Translates to: RQGLLKDRLSTSEIVLYFSWSLH*LYFPDI
Trigger: TATGTCTGGAAAATACAGCCAGTGTAGTGACCAGCT...GAAATACAGTACTATTTCTGAAGTTGATAGCCGATCTTTAAGAAGACCCTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR-3UTR CCA 90 bp GCAAACCCTGAAAAAGTTAACCTGCTATGTGACAGGTTAACTCTTTCCCTTGTTTCTAGAATTAGCGAATaGCTCCTATTCACTCACAAA +
Preference number: 2 (lower is better)
Translates to: ANPEKVNLLCDRLTLSLVSRISE*LLFTHK
Trigger: TTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGA...AACAAGGGAAAGAGTTAACCTGTCACATAGCAGGTTAACTTTTTCAGGGTTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CAA 90 bp CTCTATGGGGCACCTACAGGAATGTCAATCATTTCGCAGGCATGCCTGGCCCCACAGCTGAGCCTTGAGTaGTGGAGTGCTTGGGGGTGG +
Preference number: 3 (lower is better)
Translates to: LYGAPTGMSIISQACLAPQLSLE*WSAWGW
Trigger: CCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTG...TGGGGCCAGGCATGCCTGCGAAATGATTGACATTCCTGTAGGTGCCCCATAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR TCA 72 bp TTTGTCCCAGCAGAGAACACAGCCCCGTTCCTGCAATaGCTTAGCCACCGCGGTCCTAGGAGGGTAATCATC +
Preference number: 3 (lower is better)
Translates to: FVPAENTAPFLQ*LSHRGPRRVII
Trigger: GATGATTACCCTCCTAGGACCGCGGTGGCTAAGTCATTGCAGGAACGGGGCTGTGTTCTCTGCTGGGACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR CCA 72 bp CGCAGGCATGCCTGGCCCCAAATGCATGACTGGATGTaGACAGCCGAGGTAAAAGCCCTTAATGAGTGGCAT +
Preference number: 3 (lower is better)
Translates to: RRHAWPQMHDWM*TAEVKALNEWH
Trigger: ATGCCACTCATTAAGGGCTTTTACCTCGGCTGTCCACATCCAGTCATGCATTTGGGGCCAGGCATGCCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR TCA 72 bp AGCGAACCAGTCTCTGGAACAAAACCAGCTGAGCCTTaGGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGA +
Preference number: 3 (lower is better)
Translates to: SEPVSGTKPAEP*VVECLGVDLFG
Trigger: TCCGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAGAGACTGGTTCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
3UTR TCA 72 bp ACTGTGCCAATGAGTGCCGAGTGCCAAGATCAGCTGTaGCACTCGGACCCTAGGTCAAAGTCACAACACCAC +
Preference number: 3 (lower is better)
Translates to: TVPMSAECQDQL*HSDPRSKSQHH
Trigger: GTGGTGTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACTCGGCACTCATTGGCACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR CCA 72 bp CACCTACAGGAATGTCAATCATTTCGCAGGCATGCCTaGCCCCAAATGCATGACTGGATGTGGACAGCCGAG +
Preference number: 3 (lower is better)
Translates to: HLQECQSFRRHA*PQMHDWMWTAE
Trigger: CTCGGCTGTCCACATCCAGTCATGCATTTGGGGCCAGGCATGCCTGCGAAATGATTGACATTCCTGTAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR CCA 72 bp GAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTTaGGGGTGGATCTCTTCGGATAGTCCAAGATGCAGC +
Preference number: 3 (lower is better)
Translates to: EQNQLSLELWSA*GWISSDSPRCS
Trigger: GCTGCATCTTGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
3UTR CCA 72 bp CAGTCTCTGGAACAAAACCAGCTGAGCCTTGAGTTGTaGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCA +
Preference number: 3 (lower is better)
Translates to: QSLEQNQLSLEL*SAWGWISSDSP
Trigger: TGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAGAGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
3UTR CCA 72 bp TCATTTCGCAGGCATGCCTGGCCCCAAATGCATGACTaGATGTGGACAGCCGAGGTAAAAGCCCTTAATGAG +
Preference number: 3 (lower is better)
Translates to: SFRRHAWPQMHD*MWTAEVKALNE
Trigger: CTCATTAAGGGCTTTTACCTCGGCTGTCCACATCCAGTCATGCATTTGGGGCCAGGCATGCCTGCGAAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR CCA 72 bp GGCTCACTGAGCATGACAGCATCAGGACCCCTGGAGTaGCTTTCAAACTTACCTTCTTCTGCAGGCTACTTC +
Preference number: 3 (lower is better)
Translates to: GSLSMTASGPLE*LSNLPSSAGYF
Trigger: GAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTCCAGGGGTCCTGATGCTGTCATGCTCAGTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CAA 90 bp CAGCCGCTCTCTCACACACCCACACACAGAGAGCTATTCACACACACACATGTCGGAGGATGGTTGGGATaGATAAGAGTGCTCAGGGTT +
Preference number: 3 (lower is better)
Translates to: QPLSHTPTHRELFTHTHVGGWLG*IRVLRV
Trigger: AACCCTGAGCACTCTTATCAATCCCAACCATCCTCC...GACATGTGTGTGTGTGAATAGCTCTCTGTGTGTGGGTGTGTGAGAGAGCGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
3UTR-3UTR CAA 90 bp CCACCAGACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGTGGCAGCTTGTAGGGTaGGCTGGCAGAACCTACACC +
Preference number: 3 (lower is better)
Translates to: PPDTVGLELANGSYSLTKWQLVG*AGRTYT
Trigger: GGTGTAGGTTCTGCCAGCCAACCCTACAAGCTGCCA...CTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTCTGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CAA 90 bp CAAGGAGATGGGTCAGCTAGCCTACCCACAGATAAAGATAACAAACACACCAAGAGTGAGTTGGGGTACTaGGGAATGGAGCCATCGGGG +
Preference number: 3 (lower is better)
Translates to: QGDGSASLPTDKDNKHTKSELGY*GMEPSG
Trigger: CCCCGATGGCTCCATTCCCAAGTACCCCAACTCACT...CTTGGTGTGTTTGTTATCTTTATCTGTGGGTAGGCTAGCTGACCCATCTCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR CCA 72 bp AGGAGGATGGTTGGGATTGATAAGAGTGCTCAGGGTTaGGGATCCGGGAAAGAGATGTCTGAGAGTTCACAC +
Preference number: 3 (lower is better)
Translates to: RRMVGIDKSAQG*GSGKEMSESSH
Trigger: GTGTGAACTCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
3UTR CCA 72 bp GTCCGAAACAGGGCTAGACTTTGGAGAACTGTAAAATaGCTCACTGAGCATGACAGCATCAGGACCCCTGGA +
Preference number: 3 (lower is better)
Translates to: VRNRARLWRTVK*LTEHDSIRTPG
Trigger: TCCAGGGGTCCTGATGCTGTCATGCTCAGTGAGCCATTTTACAGTTCTCCAAAGTCTAGCCCTGTTTCGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CAA 90 bp AAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTAGTGAGTTGGGGTACTaGGGAATGGAGCCATCGGGG +
Preference number: 3 (lower is better)
Translates to: KLTFFCRLLLEIPRTYQLSELGY*GMEPSG
Trigger: CCCCGATGGCTCCATTCCCAAGTACCCCAACTCACT...AAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR TCA 72 bp AGAGGTGGTTCCGCAGACACCCAGTGGCTGTTATCTTaGCATTTCAAAGACACCAGAAGACAAGGGGGTCTT +
Preference number: 3 (lower is better)
Translates to: RGGSADTQWLLS*HFKDTRRQGGL
Trigger: AAGACCCCCTTGTCTTCTGGTGTCTTTGAAATGTCAAGATAACAGCCACTGGGTGTCTGCGGAACCACCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR TCA 72 bp AACTCAGGAGGAGCCCTAAAGCTAAGCCCTTGGGCTTaGCAGCTCTACTTTTCACCTCTAACTACCACTGTG +
Preference number: 3 (lower is better)
Translates to: NSGGALKLSPWA*QLYFSPLTTTV
Trigger: CACAGTGGTAGTTAGAGGTGAAAAGTAGAGCTGTCAAGCCCAAGGGCTTAGCTTTAGGGCTCCTCCTGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR GCA 72 bp AGGACCCCTGGAGTGGCTTTCAAACTTACCTTCTTCTaGAGGCTACTTCTGGAAATCCCTAGGACTTACCAG +
Preference number: 3 (lower is better)
Translates to: RTPGVAFKLTFF*RLLLEIPRTYQ
Trigger: CTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTCCAGGGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR CCA 72 bp AGAGGTGAAGTGCAGGTCCGAAACAGGGCTAGACTTTaGAGAACTGTAAAATGGCTCACTGAGCATGACAGC +
Preference number: 3 (lower is better)
Translates to: RGEVQVRNRARL*RTVKWLTEHDS
Trigger: GCTGTCATGCTCAGTGAGCCATTTTACAGTTCTCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTCACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CAA 90 bp AAACAAGCGAACCAGTCTCTGGAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTACCCAAGGAGGATGGTaGGGATTGATAAGAGTGCTC +
Preference number: 3 (lower is better)
Translates to: KQANQSLEQNQLSLELWSTQGGW*GLIRVL
Trigger: GAGCACTCTTATCAATCCCAACCATCCTCCTTGGGT...ACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAGAGACTGGTTCGCTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
3UTR-3UTR CAA 90 bp TCAAGTTCCCGTGATCTGGCTCAGCCAGTGAATGGTCGAATACCTCTAACTGCATCCTCTTCTGCCTCTTaGAGTTGCTCACAGACCAAA +
Preference number: 3 (lower is better)
Translates to: SSSRDLAQPVNGRIPLTASSSAS*SCSQTK
Trigger: TTTGGTCTGTGAGCAACTCAAAGAGGCAGAAGAGGA...TGCAGTTAGAGGTATTCGACCATTCACTGGCTGAGCCAGATCACGGGAACTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR GCA 72 bp TATGCCAGGCCAGCCTACAAGGGTCTATTTGCCAGATaGCATGAATGTTTTAAGGGGCAGCACATAGGTACA +
Preference number: 3 (lower is better)
Translates to: YARPAYKGLFAR*HECFKGQHIGT
Trigger: TGTACCTATGTGCTGCCCCTTAAAACATTCATGGCATCTGGCAAATAGACCCTTGTAGGCTGGCCTGGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR GCA 72 bp AAATCTCAAGGTAGCACATGCTCTAGCCTTTCATCTTaGCTTTTCTTGGCAGGGCTGCTGTGGTTGAGACAG +
Preference number: 3 (lower is better)
Translates to: KSQGSTCSSLSS*LFLAGLLWLRQ
Trigger: CTGTCTCAACCACAGCAGCCCTGCCAAGAAAAGGCAAGATGAAAGGCTAGAGCATGTGCTACCTTGAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR-3UTR CAA 90 bp TTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGATGCAGTCTTTCTCGTTaGTTTTGGGTGCTGTTCTTG +
Preference number: 3 (lower is better)
Translates to: LGLIRVLRVGDPGKRCLRCSLSR*FWVLFL
Trigger: CAAGAACAGCACCCAAAACAAACGAGAAAGACTGCA...TCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
3UTR-3UTR CAA 90 bp AGGAGAAGTAACATAAGAGTTAAAGGGGCCCTCTCTGAACACTCACCCCTCGCCGATGCAGCATTAGAGTaGGGTTTGTTGGTTTGGAAT +
Preference number: 3 (lower is better)
Translates to: RRSNIRVKGALSEHSPLADAALE*GLLVWN
Trigger: ATTCCAAACCAACAAACCCAACTCTAATGCTGCATC...GGCGAGGGGTGAGTGTTCAGAGAGGGCCCCTTTAACTCTTATGTTACTTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
3UTR-3UTR CAA 90 bp GCAAACCCTGAAAAAGTTAACCTGCTATGTGACAGGTTAACTCTTTCCCTTGTTTGGCAGCTTGTAGGGTaGGCTGGCAGAACCTACACC +
Preference number: 3 (lower is better)
Translates to: ANPEKVNLLCDRLTLSLVWQLVG*AGRTYT
Trigger: GGTGTAGGTTCTGCCAGCCAACCCTACAAGCTGCCA...AACAAGGGAAAGAGTTAACCTGTCACATAGCAGGTTAACTTTTTCAGGGTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CAA 90 bp CAAGGAGATGGGTCAGCTAGCCTACCCACAGATAAAGATAACAAACACACCAAGCCTAAAGCTAAGCCCTaGGGCTTGACAGCTCTACTT +
Preference number: 3 (lower is better)
Translates to: QGDGSASLPTDKDNKHTKPKAKP*GLTALL
Trigger: AAGTAGAGCTGTCAAGCCCAAGGGCTTAGCTTTAGG...CTTGGTGTGTTTGTTATCTTTATCTGTGGGTAGGCTAGCTGACCCATCTCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CAA 90 bp AGAAGTAACATAAGAGTTAAAGGGGCCCTCTCTGAACACTCACCCCTCGCCCAAATCGAGGCAACATGTTaGCAGTCTTTCTCGTTTGTT +
Preference number: 3 (lower is better)
Translates to: RSNIRVKGALSEHSPLAQIEATC*QSFSFV
Trigger: AACAAACGAGAAAGACTGCAAACATGTTGCCTCGAT...TTGGGCGAGGGGTGAGTGTTCAGAGAGGGCCCCTTTAACTCTTATGTTACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
3UTR-3UTR CAA 90 bp GAGTGGCTTTCAAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGATCCTCTTCTGCCTCTTaGAGTTGCTCACAGACCAAA +
Preference number: 3 (lower is better)
Translates to: EWLSNLPSSAGYFWKSLGSSSAS*SCSQTK
Trigger: TTTGGTCTGTGAGCAACTCAAAGAGGCAGAAGAGGA...TCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CAA 90 bp AGGACTTACCAGCTTTCTGAACACTGCGCATCATGGGAGGGTGAAGAGGAAAAGGCGCTTCTATGGATTTaGACGTGTGAAGTTTCCTTT +
Preference number: 3 (lower is better)
Translates to: RTYQLSEHCASWEGEEEKALLWI*TCEVSF
Trigger: AAAGGAAACTTCACACGTCAAAATCCATAGAAGCGC...CTTTTCCTCTTCACCCTCCCATGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CAA 90 bp AGGACTTACCAGCTTTCTGAACACTGCGCATCATGGGAGGGTGAAGAGGAAAAGGGCTGGGCATACTGGTaGAGTTTCAAATATATTTCC +
Preference number: 3 (lower is better)
Translates to: RTYQLSEHCASWEGEEEKGWAYW*SFKYIS
Trigger: GGAAATATATTTGAAACTCAACCAGTATGCCCAGCC...CTTTTCCTCTTCACCCTCCCATGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR GCA 72 bp AGTGCTTGGGGGTGGATCTCTTCGGATAGTCCAAGATaGAGCATTAGAGTTGGGTTTGTTGGTTTGGAATCA +
Preference number: 3 (lower is better)
Translates to: SAWGWISSDSPR*SIRVGFVGLES
Trigger: TGATTCCAAACCAACAAACCCAACTCTAATGCTGCATCTTGGACTATCCGAAGAGATCCACCCCCAAGCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
3UTR-3UTR CAA 90 bp CCAGAAACCAAAATGAACCCAAGGAGGATGGTTGGGATTGATAAGAGTGCTCAGTCTTTCTCGTTTGTTTaGGGTGCTGTTCTTGCTTCG +
Preference number: 3 (lower is better)
Translates to: PETKMNPRRMVGIDKSAQSFSFV*GAVLAS
Trigger: CGAAGCAAGAACAGCACCCAAAACAAACGAGAAAGA...CTGAGCACTCTTATCAATCCCAACCATCCTCCTTGGGTTCATTTTGGTTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
3UTR-3UTR CAA 90 bp AGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTCTGAACACTGCGCATCAATAAACAGCTGTTGGTaGAACTCTTGCTCTCTGCAT +
Preference number: 3 (lower is better)
Translates to: RLLLEIPRTYQLSEHCASINSCW*NSCSLH
Trigger: ATGCAGAGAGCAAGAGTTCAACCAACAGCTGTTTAT...TGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CAA 90 bp GCAAACCCTGAAAAAGTTAACCTGCTATGTGACAGGTTAACTCTTTCCCTTGTTGACCAGCCTCCAGCCTaGGTGTGGTATCTACATGTA +
Preference number: 3 (lower is better)
Translates to: ANPEKVNLLCDRLTLSLVDQPPA*VWYLHV
Trigger: TACATGTAGATACCACACCAAGGCTGGAGGCTGGTC...AACAAGGGAAAGAGTTAACCTGTCACATAGCAGGTTAACTTTTTCAGGGTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR TCA 72 bp TACATCCCGCTCCCCTTGTTGCTTAGAGAAGACACATaGGCAGCAATGGTTACATCTTCATTTGACCTTCTC +
Preference number: 3 (lower is better)
Translates to: YIPLPLLLREDT*AAMVTSSFDLL
Trigger: GAGAAGGTCAAATGAAGATGTAACCATTGCTGCTCATGTGTCTTCTCTAAGCAACAAGGGGAGCGGGATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR TCA 72 bp TTCTTGTACATCCTAGCTCTGACTCTCCCGAAAGGTTaGAATGGTGTTTGTAACCCAAAGGAGAAGTCGGTG +
Preference number: 3 (lower is better)
Translates to: FLYILALTLPKG*NGVCNPKEKSV
Trigger: CACCGACTTCTCCTTTGGGTTACAAACACCATTTCAACCTTTCGGGAGAGTCAGAGCTAGGATGTACAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR CCA 72 bp GTGTCATTCAGTACAAGGCAAAAAGGAGATCAATACTaGCAGTGGGGTTTCCCAAAGGGAATGACTCAAGGA +
Preference number: 3 (lower is better)
Translates to: VSFSTRQKGDQY*QWGFPKGMTQG
Trigger: TCCTTGAGTCATTCCCTTTGGGAAACCCCACTGCCAGTATTGATCTCCTTTTTGCCTTGTACTGAATGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CAA 90 bp CAAGGAGATGGGTCAGCTAGCCTACCCACAGATAAAGATAACAAACACACCAAGTTCTGCCTCTTTGAGTaGCTCACAGACCAAAGAAAT +
Preference number: 3 (lower is better)
Translates to: QGDGSASLPTDKDNKHTKFCLFE*LTDQRN
Trigger: ATTTCTTTGGTCTGTGAGCAACTCAAAGAGGCAGAA...CTTGGTGTGTTTGTTATCTTTATCTGTGGGTAGGCTAGCTGACCCATCTCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CAA 90 bp GAGTGGCTTTCAAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGAGCGCTTCTATGGATTTaGACGTGTGAAGTTTCCTTT +
Preference number: 3 (lower is better)
Translates to: EWLSNLPSSAGYFWKSLGALLWI*TCEVSF
Trigger: AAAGGAAACTTCACACGTCAAAATCCATAGAAGCGC...TCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR TCA 72 bp GGAGTGACAGAGAAGGTGACATCCTCAGCTGAAGTGTaGAGGCATTCACAAAGATTAGAGCAGTCTCATATT +
Preference number: 3 (lower is better)
Translates to: GVTEKVTSSAEV*RHSQRLEQSHI
Trigger: AATATGAGACTGCTCTAATCTTTGTGAATGCCTTCACACTTCAGCTGAGGATGTCACCTTCTCTGTCACTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR GCA 72 bp ATTAGCAACTTCTCTCTTACATCCCGCTCCCCTTGTTaGTTAGAGAAGACACATGAGCAGCAATGGTTACAT +
Preference number: 3 (lower is better)
Translates to: ISNFSLTSRSPC*LEKTHEQQWLH
Trigger: ATGTAACCATTGCTGCTCATGTGTCTTCTCTAAGCAACAAGGGGAGCGGGATGTAAGAGAGAAGTTGCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR GCA 72 bp AATAAAAACATAAATTGGTGTGCATGCGTGCGTGCGTaGATGTGTGTATGTGTGTGTGCGTGCATGTGTGTA +
Preference number: 3 (lower is better)
Translates to: NKNINWCACVRA*MCVCVCACMCV
Trigger: TACACACATGCACGCACACACACATACACACATGCACGCACGCACGCATGCACACCAATTTATGTTTTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR CCA 72 bp TCACAAAGCACTTTAAGCCTCGTCCAGGCGCTTCTATaGATTTTGACGTGTGAAGTTTCCTTTCCAGTTTGT +
Preference number: 3 (lower is better)
Translates to: SQSTLSLVQALL*ILTCEVSFPVC
Trigger: ACAAACTGGAAAGGAAACTTCACACGTCAAAATCCATAGAAGCGCCTGGACGAGGCTTAAAGTGCTTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR CCA 72 bp TGGCTTTCAAACTTACCTTCTTCTGCAGGCTACTTCTaGAAATCCCTAGGACTTACCAGCTTTCTGAACACT +
Preference number: 3 (lower is better)
Translates to: WLSNLPSSAGYF*KSLGLTSFLNT
Trigger: AGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CAA 90 bp AGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTCTGAACACTGCGCATCATTTGCTTTTCAAGTGTaGATTAGAAAGAGAAAGCGG +
Preference number: 3 (lower is better)
Translates to: RLLLEIPRTYQLSEHCASFAFQV*IRKRKR
Trigger: CCGCTTTCTCTTTCTAATCAACACTTGAAAAGCAAA...TGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CAA 90 bp CCACCAGACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGTTTGCTTTTCAAGTGTaGATTAGAAAGAGAAAGCGG +
Preference number: 3 (lower is better)
Translates to: PPDTVGLELANGSYSLTKFAFQV*IRKRKR
Trigger: CCGCTTTCTCTTTCTAATCAACACTTGAAAAGCAAA...CTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTCTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CAA 90 bp CATTCACCCTTCCCCTTTCACCTGGGTATAAGACAAATGAAATCGTGGGTGACCATCAAGATTTGGATCTaGATGCGAACAATCTTATCC +
Preference number: 3 (lower is better)
Translates to: HSPFPFHLGIRQMKSWVTIKIWI*MRTILS
Trigger: GGATAAGATTGTTCGCATCAAGATCCAAATCTTGAT...GGTCACCCACGATTTCATTTGTCTTATACCCAGGTGAAAGGGGAAGGGTGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CAA 90 bp TGTTATCTTGACATTTCAAAGACACCAGAAGACAAGGGGGTCTTGTTTGAGTGTTGCAGTCTTTCTCGTTaGTTTTGGGTGCTGTTCTTG +
Preference number: 3 (lower is better)
Translates to: CYLDISKTPEDKGVLFECCSLSR*FWVLFL
Trigger: CAAGAACAGCACCCAAAACAAACGAGAAAGACTGCA...ACACTCAAACAAGACCCCCTTGTCTTCTGGTGTCTTTGAAATGTCAAGATAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR-3UTR CAA 90 bp GTCCAGGCGCTTCTATGGATTTTGACGTGTGAAGTTTCCTTTCCAGTTTGTTTTGTATTCTGGATCGGTTaGATCGAGATTATGGCATTC +
Preference number: 3 (lower is better)
Translates to: VQALLWILTCEVSFPVCFVFWIG*IEIMAF
Trigger: GAATGCCATAATCTCGATCAAACCGATCCAGAATAC...AAAACAAACTGGAAAGGAAACTTCACACGTCAAAATCCATAGAAGCGCCTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR GCA 72 bp TGTCTTCTGAGAAGCAACTCTAAACACATGCATGCATaGATTCGCCTGTCCAGTCTATTTTTCTTAGAAGAG +
Preference number: 3 (lower is better)
Translates to: CLLRSNSKHMHA*IRLSSLFFLEE
Trigger: CTCTTCTAAGAAAAATAGACTGGACAGGCGAATGCATGCATGCATGTGTTTAGAGTTGCTTCTCAGAAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR-3UTR CAA 90 bp TGTTATCTTGACATTTCAAAGACACCAGAAGACAAGGGGGTCTTGTTTGAGTGTGATGCAGCATTAGAGTaGGGTTTGTTGGTTTGGAAT +
Preference number: 3 (lower is better)
Translates to: CYLDISKTPEDKGVLFECDAALE*GLLVWN
Trigger: ATTCCAAACCAACAAACCCAACTCTAATGCTGCATC...ACACTCAAACAAGACCCCCTTGTCTTCTGGTGTCTTTGAAATGTCAAGATAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR-3UTR CAA 90 bp GCAAACCCTGAAAAAGTTAACCTGCTATGTGACAGGTTAACTCTTTCCCTTGTTGTATTCTGGATCGGTTaGATCGAGATTATGGCATTC +
Preference number: 3 (lower is better)
Translates to: ANPEKVNLLCDRLTLSLVVFWIG*IEIMAF
Trigger: GAATGCCATAATCTCGATCAAACCGATCCAGAATAC...AACAAGGGAAAGAGTTAACCTGTCACATAGCAGGTTAACTTTTTCAGGGTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CAA 90 bp GCAAACCCTGAAAAAGTTAACCTGCTATGTGACAGGTTAACTCTTTCCCTTGTTTTCTGCCTCTTTGAGTaGCTCACAGACCAAAGAAAT +
Preference number: 3 (lower is better)
Translates to: ANPEKVNLLCDRLTLSLVFCLFE*LTDQRN
Trigger: ATTTCTTTGGTCTGTGAGCAACTCAAAGAGGCAGAA...AACAAGGGAAAGAGTTAACCTGTCACATAGCAGGTTAACTTTTTCAGGGTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR-3UTR CAA 90 bp AGACAGGGTCTTCTTAAAGATCGGCTATCAACTTCAGAAATAGTACTGTATTTCTCTTTCTCGTTTGTTTaGGGTGCTGTTCTTGCTTCG +
Preference number: 3 (lower is better)
Translates to: RQGLLKDRLSTSEIVLYFSFSFV*GAVLAS
Trigger: CGAAGCAAGAACAGCACCCAAAACAAACGAGAAAGA...GAAATACAGTACTATTTCTGAAGTTGATAGCCGATCTTTAAGAAGACCCTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR TCA 72 bp AACATTCATTATGAGCTTCTCTTTTATAAGGCAACATaGGACAGATTTGCTTTAGGGCTGGAGAGGTGGTTC +
Preference number: 3 (lower is better)
Translates to: NIHYELLFYKAT*DRFALGLERWF
Trigger: GAACCACCTCTCCAGCCCTAAAGCAAATCTGTCTCATGTTGCCTTATAAAAGAGAAGCTCATAATGAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR-3UTR CAA 90 bp AGACAGGGTCTTCTTAAAGATCGGCTATCAACTTCAGAAATAGTACTGTATTTCGTTGCTATCATCTCTTaGTCTTCTGAGAAGCAACTC +
Preference number: 3 (lower is better)
Translates to: RQGLLKDRLSTSEIVLYFVAIIS*SSEKQL
Trigger: GAGTTGCTTCTCAGAAGACAAAGAGATGATAGCAAC...GAAATACAGTACTATTTCTGAAGTTGATAGCCGATCTTTAAGAAGACCCTGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR-3UTR CAA 90 bp AGACAGGGTCTTCTTAAAGATCGGCTATCAACTTCAGAAATAGTACTGTATTTCGCATTAGAGTTGGGTTaGTTGGTTTGGAATCAACAA +
Preference number: 3 (lower is better)
Translates to: RQGLLKDRLSTSEIVLYFALELG*LVWNQQ
Trigger: TTGTTGATTCCAAACCAACAAACCCAACTCTAATGC...GAAATACAGTACTATTTCTGAAGTTGATAGCCGATCTTTAAGAAGACCCTGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR TCA 72 bp TCCTTAGGCGTTAATATGAAATCAAGATTTGGATCTTaGTGCGAACAATCTTATCCTTCACACAGTTTCATT +
Preference number: 3 (lower is better)
Translates to: SLGVNMKSRFGS*CEQSYPSHSFI
Trigger: AATGAAACTGTGTGAAGGATAAGATTGTTCGCATCAAGATCCAAATCTTGATTTCATATTAACGCCTAAGGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TCCAGGCTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGGGTGTGGGCTCGGTCCCTaGCAGGAGGGTGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: SRLPLTSPGRLPTERRYGCGLGP*QEGAPC
Trigger: GCAGGGGGCACCCTCCTGCCAGGGACCGAGCCCACA...CCCATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAGCCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357118.8
CDS-3UTR CCA 90 bp TCCAGGCTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGGGTTGGGCTGGAGCTGCTaGCCCAGGTGGTCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: SRLPLTSPGRLPTERRYGLGWSC*PRWSGA
Trigger: GGCTCCGGACCACCTGGGCCAGCAGCTCCAGCCCAA...CCCATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAGCCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp CTACTGTGGGCCGAACTCAGGAGGAGCCCTAAAGCTAAGCCCTTGGGCTTGACAGGCGGCGGTGGCGGCTaGGATCGCCTGGGAGTGAGC +
Preference number: 4 (lower is better)
Translates to: LLWAELRRSPKAKPLGLTGGGGG*DRLGVS
Trigger: GCTCACTCCCAGGCGATCCCAGCCGCCACCGCCGCC...TGTCAAGCCCAAGGGCTTAGCTTTAGGGCTCCTCCTGAGTTCGGCCCACAGTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp AGAAAGCAACCCTGTGGCCCTGTTGACCACCTAGTCCGGGAGAGTGTGGAGGTAATCCCGCGGCACCCTTaGCGGACACACGGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: RKQPCGPVDHLVRESVEVIPRHP*RTHGRR
Trigger: CCTCCGCCCGTGTGTCCGTCAAGGGTGCCGCGGGAT...TACCTCCACACTCTCCCGGACTAGGTGGTCAACAGGGCCACAGGGTTGCTTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TCCAGGCTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGGGTTCCACTCGCCGCCCTaGTCCTCACGGATGACCCAC +
Preference number: 4 (lower is better)
Translates to: SRLPLTSPGRLPTERRYGFHSPP*SSRMTH
Trigger: GTGGGTCATCCGTGAGGACCAGGGCGGCGAGTGGAA...CCCATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAGCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp GTTTTGTCCCAGCAGAGAACACAGCCCCGTTCCTGCAATGACTTAGCCACCGCGGGGCCGGCTGCAGGCTaGTGCCTCGCTCGCGATCTC +
Preference number: 4 (lower is better)
Translates to: VLSQQRTQPRSCNDLATAGPAAG*CLARDL
Trigger: GAGATCGCGAGCGAGGCACCAGCCTGCAGCCGGCCC...CGCGGTGGCTAAGTCATTGCAGGAACGGGGCTGTGTTCTCTGCTGGGACAAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GATCCAGGCTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGAGCAGGGAGCATCTGTaGCCCGGCAGCCGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: DPGFPSRLLADCPLRGGMSREHL*PGSRRA
Trigger: AGCTCTTCGGCTGCCGGGTCACAGATGCTCCCTGCT...CATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAGCCTGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp TCCAGGCTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGGGAGCAACTTGCTCTCCTaGCTGGCTTCCCGCACCACC +
Preference number: 4 (lower is better)
Translates to: SRLPLTSPGRLPTERRYGSNLLS*LASRTT
Trigger: GGTGGTGCGGGAAGCCAGCCAGGAGAGCAAGTTGCT...CCCATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAGCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp TCCAGGCTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGGGTCTGGGAGTCTGCAATaGGGCCTGAGAGCATCCCCA +
Preference number: 4 (lower is better)
Translates to: SRLPLTSPGRLPTERRYGSGSLQ*GLRASP
Trigger: TGGGGATGCTCTCAGGCCTCATTGCAGACTCCCAGA...CCCATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAGCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp CTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGGGATAAGGCGTAGCTGGGCAGGATaGTCCGCCCGTGCTTCCACT +
Preference number: 4 (lower is better)
Translates to: LPLTSPGRLPTERRYGIRRSWAG*SARAST
Trigger: AGTGGAAGCACGGGCGGATCATCCTGCCCAGCTACG...CCTTATCCCATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp CTCTGTTCTCCTTCCCGTCCAGTGGTGACCAGTTACAATAACTCGCTGATGGGGATCCCGCGGCACCCTTaGCGGACACACGGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: LCSPSRPVVTSYNNSLMGIPRHP*RTHGRR
Trigger: CCTCCGCCCGTGTGTCCGTCAAGGGTGCCGCGGGAT...CCCCATCAGCGAGTTATTGTAACTGGTCACCACTGGACGGGAAGGAGAACAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGCCCCGCGGCCGCCCGTaGCCTGGTACTGGAACTCCA +
Preference number: 4 (lower is better)
Translates to: EQNQLSLELWSAWGWISSPRGRP*PGTGTP
Trigger: TGGAGTTCCAGTACCAGGCCACGGGCGGCCGCGGGG...CGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp GATCCAGGCTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGACCAGTAGGCTGGGATaGGCTGCATGGGCACCGTGT +
Preference number: 4 (lower is better)
Translates to: DPGFPSRLLADCPLRGGMTSRLG*AAWAPC
Trigger: ACACGGTGCCCATGCAGCCCATCCCAGCCTACTGGT...CATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAGCCTGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp ATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGGGCGGCGGTGGCGGCTaGGATCGCCTGGGAGTGAGC +
Preference number: 4 (lower is better)
Translates to: MGHHQSQLPVPHLASLLRGGGGG*DRLGVS
Trigger: GCTCACTCCCAGGCGATCCCAGCCGCCACCGCCGCC...CCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR TCA 90 bp CAGCCGCTCTCTCACACACCCACACACAGAGAGCTATTCACACACACACATGTCCCGGAGGGCGATACCTaGGTGCCAGGTCTGAGGGCG +
Preference number: 4 (lower is better)
Translates to: QPLSHTPTHRELFTHTHVPEGDT*VPGLRA
Trigger: CGCCCTCAGACCTGGCACTCAGGTATCGCCCTCCGG...GACATGTGTGTGTGTGAATAGCTCTCTGTGTGTGGGTGTGTGAGAGAGCGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp GAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGCCGGAGGGCGATACCTaGGTGCCAGGTCTGAGGGCG +
Preference number: 4 (lower is better)
Translates to: EQNQLSLELWSAWGWISSPEGDT*VPGLRA
Trigger: CGCCCTCAGACCTGGCACTCAGGTATCGCCCTCCGG...CGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp AGAAAGCAACCCTGTGGCCCTGTTGACCACCTAGTCCGGGAGAGTGTGGAGGTACGTAGCTGGGCAGGATaGTCCGCCCGTGCTTCCACT +
Preference number: 4 (lower is better)
Translates to: RKQPCGPVDHLVRESVEVRSWAG*SARAST
Trigger: AGTGGAAGCACGGGCGGATCATCCTGCCCAGCTACG...TACCTCCACACTCTCCCGGACTAGGTGGTCAACAGGGCCACAGGGTTGCTTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp CTCTGTTCTCCTTCCCGTCCAGTGGTGACCAGTTACAATAACTCGCTGATGGGGGAGTGTCTGTGCGGCTaGGGATGTGCTGGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: LCSPSRPVVTSYNNSLMGECLCG*GCAGGR
Trigger: CCGGCCCCCAGCACATCCTCAGCCGCACAGACACTC...CCCCATCAGCGAGTTATTGTAACTGGTCACCACTGGACGGGAAGGAGAACAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp CAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCAAGGATGATCCGCCCGTaGTTCCACTCGCCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: QLSLELWSAWGWISSDSPRMIRP*FHSPPW
Trigger: CCAGGGCGGCGAGTGGAAGCACGGGCGGATCATCCT...TGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp GTGCCGAGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACAGGATGATCCGCCCGTaGTTCCACTCGCCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: VPSAKISCDTRTLGQSHNRMIRP*FHSPPW
Trigger: CCAGGGCGGCGAGTGGAAGCACGGGCGGATCATCCT...GTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACTCGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CTACTGTGGGCCGAACTCAGGAGGAGCCCTAAAGCTAAGCCCTTGGGCTTGACAACGACCTCCGCACGGTaGGTCTGGTTGGCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: LLWAELRRSPKAKPLGLTTTSAR*VWLASH
Trigger: GTGAGAGGCCAACCAGACCCACCGTGCGGAGGTCGT...TGTCAAGCCCAAGGGCTTAGCTTTAGGGCTCCTCCTGAGTTCGGCCCACAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GTTTTGTCCCAGCAGAGAACACAGCCCCGTTCCTGCAATGACTTAGCCACCGCGCCAGGCGGGCTGCACTaGGGCTCCAGAGGTATTCCT +
Preference number: 4 (lower is better)
Translates to: VLSQQRTQPRSCNDLATAPGGLH*GSRGIP
Trigger: AGGAATACCTCTGGAGCCCCAGTGCAGCCCGCCTGG...CGCGGTGGCTAAGTCATTGCAGGAACGGGGCTGTGTTCTCTGCTGGGACAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp AGGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGCCCCGCGGCCGCCCGTaGCCTGGTACTGGAACTCCA +
Preference number: 4 (lower is better)
Translates to: RMVGIDKSAQGWGSGKEMPRGRP*PGTGTP
Trigger: TGGAGTTCCAGTACCAGGCCACGGGCGGCCGCGGGG...CATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp CTCTATGGGGCACCTACAGGAATGTCAATCATTTCGCAGGCATGCCTGGCCCCATGTGGGCTCGGTCCCTaGCAGGAGGGTGCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: LYGAPTGMSIISQACLAPCGLGP*QEGAPF
Trigger: AAAGGGGGCACCCTCCTGCCAGGGACCGAGCCCACA...TGGGGCCAGGCATGCCTGCGAAATGATTGACATTCCTGTAGGTGCCCCATAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CCA 90 bp GGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGGTACGGCTGAGGATGTGCTaGGGGCCGGCTGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GHHQSQLPVPHLASLLRVRLRMC*GPAAGW
Trigger: CCAGCCTGCAGCCGGCCCCCAGCACATCCTCAGCCG...TACCCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CCA 90 bp GTGCCGAGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACACGGCTACACCCGCTTaGCCAGCCTCTCGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: VPSAKISCDTRTLGQSHNTATPA*PASRGE
Trigger: CTCCCCTCGAGAGGCTGGCCAAGCGGGTGTAGCCGT...GTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACTCGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp TCCAGGCTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGGGGGTAACCGGGAGAGGTaGTATAGCCAGCATCTTTGG +
Preference number: 4 (lower is better)
Translates to: SRLPLTSPGRLPTERRYGGNRER*YSQHLW
Trigger: CCAAAGATGCTGGCTATATCACCTCTCCCGGTTACC...CCCATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAGCCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp CTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGGGATAAGGACCGCCATGTCCGTGTaGAAGGTCAGGGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: LPLTSPGRLPTERRYGIRTAMSV*KVRERI
Trigger: GATCCTCTCCCTGACCTTTCACACGGACATGGCGGT...CCTTATCCCATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp GATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGCCGGAGGGCGATACCTaGGTGCCAGGTCTGAGGGCG +
Preference number: 4 (lower is better)
Translates to: DGTSSVSTPCTTLSLPVEPEGDT*VPGLRA
Trigger: CGCCCTCAGACCTGGCACTCAGGTATCGCCCTCCGG...CTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR TCA 90 bp AGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACACCACCTCACCGGGCTGGGCCTaGGGGATTCGAGGGAACCAG +
Preference number: 4 (lower is better)
Translates to: SAKISCDTRTLGQSHNTTSPGWA*GIRGNQ
Trigger: CTGGTTCCCTCGAATCCCTCAGGCCCAGCCCGGTGA...GGTGGTGTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp AGAAAGCAACCCTGTGGCCCTGTTGACCACCTAGTCCGGGAGAGTGTGGAGGTAGTTCCCAGATCTACCTaGAGCCACTCCTCACCGGGC +
Preference number: 4 (lower is better)
Translates to: RKQPCGPVDHLVRESVEVVPRST*SHSSPG
Trigger: GCCCGGTGAGGAGTGGCTTCAGGTAGATCTGGGAAC...TACCTCCACACTCTCCCGGACTAGGTGGTCAACAGGGCCACAGGGTTGCTTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGGTAGAGTGTCTGTGCGGCTaGGGATGTGCTGGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: GHHQSQLPVPHLASLLRVECLCG*GCAGGR
Trigger: CCGGCCCCCAGCACATCCTCAGCCGCACAGACACTC...TACCCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR TCA 90 bp CTACTGTGGGCCGAACTCAGGAGGAGCCCTAAAGCTAAGCCCTTGGGCTTGACACTCTCGAGGGGAGTCTaGGGAAGGAAGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LLWAELRRSPKAKPLGLTLSRGV*GRKLLL
Trigger: CAGCAGCAGCTTCCTTCCTCAGACTCCCCTCGAGAG...TGTCAAGCCCAAGGGCTTAGCTTTAGGGCTCCTCCTGAGTTCGGCCCACAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp ACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGGTAACATCCCGCGGCACCCTTaGCGGACACACGGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: TSSVSTPCTTLSLPVEGNIPRHP*RTHGRR
Trigger: CCTCCGCCCGTGTGTCCGTCAAGGGTGCCGCGGGAT...GTTACCCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR GCA 90 bp TCCAGGCTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGGGCTCTGGCTGTCACTCTaGAGCCGCAAGAAATTCCTG +
Preference number: 4 (lower is better)
Translates to: SRLPLTSPGRLPTERRYGLWLSL*SRKKFL
Trigger: CAGGAATTTCTTGCGGCTGCAGAGTGACAGCCAGAG...CCCATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAGCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp GCAGGACTCATTCCTTTAATAGGATCAGCAGTGAGTTGGGGTACTTGGGAATGGGTGCTGGGGGCCGGCTaGAGGCTGGTGCCTCGCTCG +
Preference number: 4 (lower is better)
Translates to: AGLIPLIGSAVSWGTWEWVLGAG*RLVPRS
Trigger: CGAGCGAGGCACCAGCCTGCAGCCGGCCCCCAGCAC...CCATTCCCAAGTACCCCAACTCACTGCTGATCCTATTAAAGGAATGAGTCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp AGGACTTACCAGCTTTCTGAACACTGCGCATCATGGGAGGGTGAAGAGGAAAAGTGTTGCTGCTGCTGGTaGGGCGGCGGTGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: RTYQLSEHCASWEGEEEKCCCCW*GGGGGW
Trigger: CCAGCCGCCACCGCCGCCGCACCAGCAGCAGCAACA...CTTTTCCTCTTCACCCTCCCATGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGGAAGGCGGCCGCCCTaGTCTTGTCCTCGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: DGTSSVSTPCTTLSLPVEGRRPP*SCPRRV
Trigger: AACCCGGCGAGGACAAGAGCAGGGCGGCCGCCTTCC...CTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CCA 90 bp CTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGGGATAAGGCCTCCGCGGGCTCCCTaGATGATGACACCTTTCACT +
Preference number: 4 (lower is better)
Translates to: LPLTSPGRLPTERRYGIRPPRAP*MMTPFT
Trigger: AGTGAAAGGTGTCATCATCCAGGGAGCCCGCGGAGG...CCTTATCCCATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp AGAAAGCAACCCTGTGGCCCTGTTGACCACCTAGTCCGGGAGAGTGTGGAGGTACCCTTCGAACAGCTTTaGCTGCTGGGTCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: RKQPCGPVDHLVRESVEVPFEQL*LLGPGV
Trigger: GACCCCAGGACCCAGCAGCCAAAGCTGTTCGAAGGG...TACCTCCACACTCTCCCGGACTAGGTGGTCAACAGGGCCACAGGGTTGCTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGGGATAAGGCTTCGCTCTTCACAGTaGGTCCCAGCGTCTCTACCG +
Preference number: 4 (lower is better)
Translates to: LPLTSPGRLPTERRYGIRLRSSQ*VPASLP
Trigger: CGGTAGAGACGCTGGGACCCACTGTGAAGAGCGAAG...CCTTATCCCATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp CTACTGTGGGCCGAACTCAGGAGGAGCCCTAAAGCTAAGCCCTTGGGCTTGACATGGCCTCCTCTTCGGTaGGGTAGGGGGTGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: LLWAELRRSPKAKPLGLTWPPLR*GRGWLS
Trigger: AGACAACCACCCCCTACCCCACCGAAGAGGAGGCCA...TGTCAAGCCCAAGGGCTTAGCTTTAGGGCTCCTCCTGAGTTCGGCCCACAGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GTGCCGAGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACCCCGTGGCCTGGTACTaGAACTCCATGCACACCGGG +
Preference number: 4 (lower is better)
Translates to: VPSAKISCDTRTLGQSHNPVAWY*NSMHTG
Trigger: CCCGGTGTGCATGGAGTTCCAGTACCAGGCCACGGG...GTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACTCGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GATCCAGGCTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGAGGGGAACCTTCTCTTaGGTCAGGTGGGTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: DPGFPSRLLADCPLRGGMRGTFS*VRWVGD
Trigger: ATCCCCAACCCACCTGACCCAAGAGAAGGTTCCCCT...CATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAGCCTGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CCA 90 bp GGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGGTACCTCTCCGAGTTCGCTaGCGCCCGCCCTCACCTCCA +
Preference number: 4 (lower is better)
Translates to: GHHQSQLPVPHLASLLRVPLRVR*RPPSPP
Trigger: TGGAGGTGAGGGCGGGCGCCAGCGAACTCGGAGAGG...TACCCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CCA 90 bp AGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTCTGAACACTGCGCATCAGGCGGCGGTGGCGGCTaGGATCGCCTGGGAGTGAGC +
Preference number: 4 (lower is better)
Translates to: RLLLEIPRTYQLSEHCASGGGGG*DRLGVS
Trigger: GCTCACTCCCAGGCGATCCCAGCCGCCACCGCCGCC...TGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGAGTTCACACTCACCGGGCTGGGCCTaGGGGATTCGAGGGAACCAG +
Preference number: 4 (lower is better)
Translates to: DKSAQGWGSGKEMSESSHSPGWA*GIRGNQ
Trigger: CTGGTTCCCTCGAATCCCTCAGGCCCAGCCCGGTGA...GTGTGAACTCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp GATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGTCACCGGGCTGGGCCTaGGGGATTCGAGGGAACCAG +
Preference number: 4 (lower is better)
Translates to: DGTSSVSTPCTTLSLPVESPGWA*GIRGNQ
Trigger: CTGGTTCCCTCGAATCCCTCAGGCCCAGCCCGGTGA...CTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR TCA 90 bp CAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCAGTTCCCAGATCTACCTaGAGCCACTCCTCACCGGGC +
Preference number: 4 (lower is better)
Translates to: QLSLELWSAWGWISSDSPVPRST*SHSSPG
Trigger: GCCCGGTGAGGAGTGGCTTCAGGTAGATCTGGGAAC...TGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp CTACTGTGGGCCGAACTCAGGAGGAGCCCTAAAGCTAAGCCCTTGGGCTTGACACCTGGTCCTCACGGATaGCCCACAGCAACTTGCTCT +
Preference number: 4 (lower is better)
Translates to: LLWAELRRSPKAKPLGLTPGPHG*PTATCS
Trigger: AGAGCAAGTTGCTGTGGGTCATCCGTGAGGACCAGG...TGTCAAGCCCAAGGGCTTAGCTTTAGGGCTCCTCCTGAGTTCGGCCCACAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp AGGACTTACCAGCTTTCTGAACACTGCGCATCATGGGAGGGTGAAGAGGAAAAGGGGATCGCCTGGGAGTaGGCGAGCCCCTCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: RTYQLSEHCASWEGEEEKGIAWE*ASPSPS
Trigger: ACTCGGAGAGGGGCTCGCTCACTCCCAGGCGATCCC...CTTTTCCTCTTCACCCTCCCATGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp AGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACACCACCGCTAACCAGGCGGGCTaGACTGGGGCTCCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: SAKISCDTRTLGQSHNTTANQAG*TGAPEV
Trigger: TACCTCTGGAGCCCCAGTGCAGCCCGCCTGGTTAGC...GGTGGTGTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp TCCAGGCTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGGGGAACTTGCGCACAAATaGTCTGGCTTCCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: SRLPLTSPGRLPTERRYGELAHK*SGFHSS
Trigger: ACTGCTGTGGAAGCCAGAGCATTTGTGCGCAAGTTC...CCCATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAGCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp GAGTGGCTTTCAAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGAGTGCTGGGGGCCGGCTaGAGGCTGGTGCCTCGCTCG +
Preference number: 4 (lower is better)
Translates to: EWLSNLPSSAGYFWKSLGVLGAG*RLVPRS
Trigger: CGAGCGAGGCACCAGCCTGCAGCCGGCCCCCAGCAC...TCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCATCCGCACGGTGGGTCTaGTTGGCCTCTCACTTGGTG +
Preference number: 4 (lower is better)
Translates to: QLSLELWSAWGWISSDSPSARWV*LASHLV
Trigger: CACCAAGTGAGAGGCCAACCAGACCCACCGTGCGGA...TGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp GAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGACGACCTCCGCACGGTaGGTCTGGTTGGCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: EQNQLSLELWSAWGWISSTTSAR*VWLASH
Trigger: GTGAGAGGCCAACCAGACCCACCGTGCGGAGGTCGT...CGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp CTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGGGATAAGGTTGGCTGCTGGGTCCTaGGGTCCTGAATGTATTCCC +
Preference number: 4 (lower is better)
Translates to: LPLTSPGRLPTERRYGIRLAAGS*GPECIP
Trigger: GGGAATACATTCAGGACCCCAGGACCCAGCAGCCAA...CCTTATCCCATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp GAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGAGCTGCTGGCCCAGGTaGTCCGGAGCCACTTGGCAT +
Preference number: 4 (lower is better)
Translates to: EQNQLSLELWSAWGWISSSCWPR*SGATWH
Trigger: ATGCCAAGTGGCTCCGGACCACCTGGGCCAGCAGCT...CGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp GAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGCCCGTGGCCTGGTACTaGAACTCCATGCACACCGGG +
Preference number: 4 (lower is better)
Translates to: EQNQLSLELWSAWGWISSPVAWY*NSMHTG
Trigger: CCCGGTGTGCATGGAGTTCCAGTACCAGGCCACGGG...CGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp TGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGCGGCCGCCCGTGGCCTaGTACTGGAACTCCATGCAC +
Preference number: 4 (lower is better)
Translates to: WLGLIRVLRVGDPGKRCLRPPVA*YWNSMH
Trigger: GTGCATGGAGTTCCAGTACCAGGCCACGGGCGGCCG...CAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp GCAGGACTCATTCCTTTAATAGGATCAGCAGTGAGTTGGGGTACTTGGGAATGGCCCCGCGGCCGCCCGTaGCCTGGTACTGGAACTCCA +
Preference number: 4 (lower is better)
Translates to: AGLIPLIGSAVSWGTWEWPRGRP*PGTGTP
Trigger: TGGAGTTCCAGTACCAGGCCACGGGCGGCCGCGGGG...CCATTCCCAAGTACCCCAACTCACTGCTGATCCTATTAAAGGAATGAGTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GATCCAGGCTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGAAGAGTGCTCAGGGTTaGGGATCCGGGAAAGAGATG +
Preference number: 4 (lower is better)
Translates to: DPGFPSRLLADCPLRGGMKSAQG*GSGKEM
Trigger: CATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTT...CATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAGCCTGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp TCCAGGCTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGGGGAACCTGGAGGCTTTTaGCCCAGGCAAACTTCTTTG +
Preference number: 4 (lower is better)
Translates to: SRLPLTSPGRLPTERRYGEPGGF*PRQTSL
Trigger: CAAAGAAGTTTGCCTGGGCCAAAAGCCTCCAGGTTC...CCCATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAGCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CCA 90 bp GCAGGACTCATTCCTTTAATAGGATCAGCAGTGAGTTGGGGTACTTGGGAATGGGGGCCGGCTGCAGGCTaGTGCCTCGCTCGCGATCTC +
Preference number: 4 (lower is better)
Translates to: AGLIPLIGSAVSWGTWEWGPAAG*CLARDL
Trigger: GAGATCGCGAGCGAGGCACCAGCCTGCAGCCGGCCC...CCATTCCCAAGTACCCCAACTCACTGCTGATCCTATTAAAGGAATGAGTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGGTAACGGCTACACCCGCTTaGCCAGCCTCTCGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: GHHQSQLPVPHLASLLRVTATPA*PASRGE
Trigger: CTCCCCTCGAGAGGCTGGCCAAGCGGGTGTAGCCGT...TACCCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR TCA 90 bp AGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTCTGAACACTGCGCATCACCGGAGGGCGATACCTaGGTGCCAGGTCTGAGGGCG +
Preference number: 4 (lower is better)
Translates to: RLLLEIPRTYQLSEHCASPEGDT*VPGLRA
Trigger: CGCCCTCAGACCTGGCACTCAGGTATCGCCCTCCGG...TGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp CAAGCGAACCAGTCTCTGGAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTAGCAGGGAGCATCTGTaGCCCGGCAGCCGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: QANQSLEQNQLSLELWSASREHL*PGSRRA
Trigger: AGCTCTTCGGCTGCCGGGTCACAGATGCTCCCTGCT...AGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAGAGACTGGTTCGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp GATCCAGGCTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGCAAACACACACACAATaGACCAGCCGCTCTCTCACA +
Preference number: 4 (lower is better)
Translates to: DPGFPSRLLADCPLRGGMQTHTQ*TSRSLT
Trigger: TGTGAGAGAGCGGCTGGTTCATTGTGTGTGTGTTTG...CATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAGCCTGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp CAAAGACACCAGAAGACAAGGGGGTCTTGTTTGAGTGTGCTAGGGGAACCTTCTCATGGTACCCTGGGCTaGTCCCCTCTCCACTCCCCG +
Preference number: 4 (lower is better)
Translates to: QRHQKTRGSCLSVLGEPSHGTLG*SPLHSP
Trigger: CGGGGAGTGGAGAGGGGATCAGCCCAGGGTACCATG...AGAAGGTTCCCCTAGCACACTCAAACAAGACCCCCTTGTCTTCTGGTGTCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR TCA 90 bp GCAGGACTCATTCCTTTAATAGGATCAGCAGTGAGTTGGGGTACTTGGGAATGGGGGATCGCCTGGGAGTaGGCGAGCCCCTCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: AGLIPLIGSAVSWGTWEWGIAWE*ASPSPS
Trigger: ACTCGGAGAGGGGCTCGCTCACTCCCAGGCGATCCC...CCATTCCCAAGTACCCCAACTCACTGCTGATCCTATTAAAGGAATGAGTCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp CTCTGTTCTCCTTCCCGTCCAGTGGTGACCAGTTACAATAACTCGCTGATGGGGCTCAGAGGCGTAAACTaGCACACATCCCGCGGCACC +
Preference number: 4 (lower is better)
Translates to: LCSPSRPVVTSYNNSLMGLRGVN*HTSRGT
Trigger: GGTGCCGCGGGATGTGTGTCAGTTTACGCCTCTGAG...CCCCATCAGCGAGTTATTGTAACTGGTCACCACTGGACGGGAAGGAGAACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GTTTTGTCCCAGCAGAGAACACAGCCCCGTTCCTGCAATGACTTAGCCACCGCGGCCTTGGCCCTCATATaGTCACAGAGGTTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: VLSQQRTQPRSCNDLATAALALI*SQRLGF
Trigger: GAAGCCCAACCTCTGTGATCATATGAGGGCCAAGGC...CGCGGTGGCTAAGTCATTGCAGGAACGGGGCTGTGTTCTCTGCTGGGACAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp CTACTGTGGGCCGAACTCAGGAGGAGCCCTAAAGCTAAGCCCTTGGGCTTGACATGCCAAGATCAGCTGTaGCACTCGGACCCTAGGTCA +
Preference number: 4 (lower is better)
Translates to: LLWAELRRSPKAKPLGLTCQDQL*HSDPRS
Trigger: TGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCA...TGTCAAGCCCAAGGGCTTAGCTTTAGGGCTCCTCCTGAGTTCGGCCCACAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GTTTTGTCCCAGCAGAGAACACAGCCCCGTTCCTGCAATGACTTAGCCACCGCGTGCCAAGATCAGCTGTaGCACTCGGACCCTAGGTCA +
Preference number: 4 (lower is better)
Translates to: VLSQQRTQPRSCNDLATACQDQL*HSDPRS
Trigger: TGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCA...CGCGGTGGCTAAGTCATTGCAGGAACGGGGCTGTGTTCTCTGCTGGGACAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GTTTTGTCCCAGCAGAGAACACAGCCCCGTTCCTGCAATGACTTAGCCACCGCGCGCATCATGGGAGGGTaGAGAGGAAAAGGGGCTAGT +
Preference number: 4 (lower is better)
Translates to: VLSQQRTQPRSCNDLATARIMGG*RGKGAS
Trigger: ACTAGCCCCTTTTCCTCTTCACCCTCCCATGATGCG...CGCGGTGGCTAAGTCATTGCAGGAACGGGGCTGTGTTCTCTGCTGGGACAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp ATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGGCTAACCAGGCGGGCTaGACTGGGGCTCCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: MGHHQSQLPVPHLASLLRANQAG*TGAPEV
Trigger: TACCTCTGGAGCCCCAGTGCAGCCCGCCTGGTTAGC...CCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR GCA 90 bp AGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCAAGATGCAGCATTAAGGATGATCCGCCCGTaGTTCCACTCGCCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SCGVLGGGSLRIVQDAALRMIRP*FHSPPW
Trigger: CCAGGGCGGCGAGTGGAAGCACGGGCGGATCATCCT...TAATGCTGCATCTTGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp TGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGTCCCTGGCAGGAGGGTaGCCCCTGCAAAAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: WLGLIRVLRVGDPGKRCLSLAGG*PLQKPR
Trigger: TCTCGGCTTTTGCAGGGGGCACCCTCCTGCCAGGGA...CAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357118.8
CDS-3UTR GCA 90 bp GTTTTGTCCCAGCAGAGAACACAGCCCCGTTCCTGCAATGACTTAGCCACCGCGTCTGAGGAAGGAAGCTaGTGCTGCTGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VLSQQRTQPRSCNDLATASEEGS*CCCCCC
Trigger: GCAGCAGCAACAGCAGCAGCAGCTTCCTTCCTCAGA...CGCGGTGGCTAAGTCATTGCAGGAACGGGGCTGTGTTCTCTGCTGGGACAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAGAACTGTAAAATGGCTCACTGGAAGGCGGCCGCCCTaGTCTTGTCCTCGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: EVQVRNRARLWRTVKWLTGRRPP*SCPRRV
Trigger: AACCCGGCGAGGACAAGAGCAGGGCGGCCGCCTTCC...AGTGAGCCATTTTACAGTTCTCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GTGCCGAGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACACACAGCCCCGTTCCTaGAATGACTTAGCCACCGCG +
Preference number: 4 (lower is better)
Translates to: VPSAKISCDTRTLGQSHNTQPRS*NDLATA
Trigger: CGCGGTGGCTAAGTCATTGCAGGAACGGGGCTGTGT...GTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACTCGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CTCTGTTCTCCTTCCCGTCCAGTGGTGACCAGTTACAATAACTCGCTGATGGGGTCCGCACGGTGGGTCTaGTTGGCCTCTCACTTGGTG +
Preference number: 4 (lower is better)
Translates to: LCSPSRPVVTSYNNSLMGSARWV*LASHLV
Trigger: CACCAAGTGAGAGGCCAACCAGACCCACCGTGCGGA...CCCCATCAGCGAGTTATTGTAACTGGTCACCACTGGACGGGAAGGAGAACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCACAGAGAAGCCATCCTTaGCCACCGCCATGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: QLSLELWSAWGWISSDSPQRSHP*PPPCPC
Trigger: ACACGGACATGGCGGTGGCCAAGGATGGCTTCTCTG...TGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp AGAAAGCAACCCTGTGGCCCTGTTGACCACCTAGTCCGGGAGAGTGTGGAGGTAGTCAGCAGTGGAGCGTaGAGCTTGTTCAGAACCACC +
Preference number: 4 (lower is better)
Translates to: RKQPCGPVDHLVRESVEVVSSGA*SLFRTT
Trigger: GGTGGTTCTGAACAAGCTCCACGCTCCACTGCTGAC...TACCTCCACACTCTCCCGGACTAGGTGGTCAACAGGGCCACAGGGTTGCTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGAGTTCACACCCAGGCGGGCTGCACTaGGGCTCCAGAGGTATTCCT +
Preference number: 4 (lower is better)
Translates to: DKSAQGWGSGKEMSESSHPGGLH*GSRGIP
Trigger: AGGAATACCTCTGGAGCCCCAGTGCAGCCCGCCTGG...GTGTGAACTCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp CTCAAGGCTGAAGCAGCATGGTTAAGCATTCTTGTCCACAGTACTTGCGGACTTTTGGGCTGGAGCTGCTaGCCCAGGTGGTCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: LKAEAAWLSILVHSTCGLLGWSC*PRWSGA
Trigger: GGCTCCGGACCACCTGGGCCAGCAGCTCCAGCCCAA...AAGTCCGCAAGTACTGTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CAAAGACACCAGAAGACAAGGGGGTCTTGTTTGAGTGTGCTAGGGGAACCTTCTCGGCCGCCCGTGGCCTaGTACTGGAACTCCATGCAC +
Preference number: 4 (lower is better)
Translates to: QRHQKTRGSCLSVLGEPSRPPVA*YWNSMH
Trigger: GTGCATGGAGTTCCAGTACCAGGCCACGGGCGGCCG...AGAAGGTTCCCCTAGCACACTCAAACAAGACCCCCTTGTCTTCTGGTGTCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CCA 90 bp AGGACTTACCAGCTTTCTGAACACTGCGCATCATGGGAGGGTGAAGAGGAAAAGCGGCCGCCCGTGGCCTaGTACTGGAACTCCATGCAC +
Preference number: 4 (lower is better)
Translates to: RTYQLSEHCASWEGEEEKRPPVA*YWNSMH
Trigger: GTGCATGGAGTTCCAGTACCAGGCCACGGGCGGCCG...CTTTTCCTCTTCACCCTCCCATGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GTTGTACATAACTTAGAGGTGAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGACCCCGCGGCCGCCCGTaGCCTGGTACTGGAACTCCA +
Preference number: 4 (lower is better)
Translates to: VVHNLEVKCRSETGLDFGPRGRP*PGTGTP
Trigger: TGGAGTTCCAGTACCAGGCCACGGGCGGCCGCGGGG...TCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTCACCTCTAAGTTATGTACAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CAGCCGCTCTCTCACACACCCACACACAGAGAGCTATTCACACACACACATGTCAGCAACTTGCTCTCCTaGCTGGCTTCCCGCACCACC +
Preference number: 4 (lower is better)
Translates to: QPLSHTPTHRELFTHTHVSNLLS*LASRTT
Trigger: GGTGGTGCGGGAAGCCAGCCAGGAGAGCAAGTTGCT...GACATGTGTGTGTGTGAATAGCTCTCTGTGTGTGGGTGTGTGAGAGAGCGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp GGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGGGATGGGCTGCATaGGCACCGTGTCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: GWLGLIRVLRVGDPGKRCLGWAA*APCPLW
Trigger: CCACAGTGGACACGGTGCCCATGCAGCCCATCCCAG...ACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp AGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTCTGAACACTGCGCATCACCTCTCCGAGTTCGCTaGCGCCCGCCCTCACCTCCA +
Preference number: 4 (lower is better)
Translates to: RLLLEIPRTYQLSEHCASPLRVR*RPPSPP
Trigger: TGGAGGTGAGGGCGGGCGCCAGCGAACTCGGAGAGG...TGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GCCACACCTCTATGGGGCACCTACAGGAATGTCAATCATTTCGCAGGCATGCCTACCGCCATGTCCGTGTaGAAGGTCAGGGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: ATPLWGTYRNVNHFAGMPTAMSV*KVRERI
Trigger: GATCCTCTCCCTGACCTTTCACACGGACATGGCGGT...AGGCATGCCTGCGAAATGATTGACATTCCTGTAGGTGCCCCATAGAGGTGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR TCA 90 bp CTCTATGGGGCACCTACAGGAATGTCAATCATTTCGCAGGCATGCCTGGCCCCACCTGAGTGCCAGGTCTaGGGGCGGATTCTAACAAAC +
Preference number: 4 (lower is better)
Translates to: LYGAPTGMSIISQACLAPPECQV*GRILTN
Trigger: GTTTGTTAGAATCCGCCCTCAGACCTGGCACTCAGG...TGGGGCCAGGCATGCCTGCGAAATGATTGACATTCCTGTAGGTGCCCCATAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR TCA 90 bp CAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCAGTCTGCAATGAGGCCTaGGAGCATCCCCAGCATGTT +
Preference number: 4 (lower is better)
Translates to: QLSLELWSAWGWISSDSPVCNEA*EHPQHV
Trigger: AACATGCTGGGGATGCTCTCAGGCCTCATTGCAGAC...TGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp AGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTCTGAACACTGCGCATCATCACCGGGCTGGGCCTaGGGGATTCGAGGGAACCAG +
Preference number: 4 (lower is better)
Translates to: RLLLEIPRTYQLSEHCASSPGWA*GIRGNQ
Trigger: CTGGTTCCCTCGAATCCCTCAGGCCCAGCCCGGTGA...TGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGTTCCCAGATCTACCTaGAGCCACTCCTCACCGGGC +
Preference number: 4 (lower is better)
Translates to: DGTSSVSTPCTTLSLPVEVPRST*SHSSPG
Trigger: GCCCGGTGAGGAGTGGCTTCAGGTAGATCTGGGAAC...CTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR TCA 90 bp AGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGAGTTCACACAGAATGGCTTCCACAGCAGTaGTACTGTCTCCTCCGCGGG +
Preference number: 4 (lower is better)
Translates to: RVLRVGDPGKRCLRVHTEWLPQQ*YCLLRG
Trigger: CCCGCGGAGGAGACAGTATCACTGCTGTGGAAGCCA...TTCTGTGTGAACTCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp ATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGTGGCTTCCACAGCAGTaGTACTGTCTCCTCCGCGGG +
Preference number: 4 (lower is better)
Translates to: MGHHQSQLPVPHLASLLRWLPQQ*YCLLRG
Trigger: CCCGCGGAGGAGACAGTATCACTGCTGTGGAAGCCA...CCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR TCA 90 bp GATCCAGGCTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGAATCGAAGTTGCAATTaGATCCCGAAGGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: DPGFPSRLLADCPLRGGMNRSCN*IPKGAA
Trigger: TGCAGCTCCCTTCGGGATTCAATTGCAACTTCGATT...CATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAGCCTGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp AGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACACCACCCCTGGTCCTCACGGATaGCCCACAGCAACTTGCTCT +
Preference number: 4 (lower is better)
Translates to: SAKISCDTRTLGQSHNTTPGPHG*PTATCS
Trigger: AGAGCAAGTTGCTGTGGGTCATCCGTGAGGACCAGG...GGTGGTGTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp AGAAGTAACATAAGAGTTAAAGGGGCCCTCTCTGAACACTCACCCCTCGCCCAACGTAGCTGGGCAGGATaGTCCGCCCGTGCTTCCACT +
Preference number: 4 (lower is better)
Translates to: RSNIRVKGALSEHSPLAQRSWAG*SARAST
Trigger: AGTGGAAGCACGGGCGGATCATCCTGCCCAGCTACG...TTGGGCGAGGGGTGAGTGTTCAGAGAGGGCCCCTTTAACTCTTATGTTACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp GGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGGTACTCTCGAGGGGAGTCTaGGGAAGGAAGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GHHQSQLPVPHLASLLRVLSRGV*GRKLLL
Trigger: CAGCAGCAGCTTCCTTCCTCAGACTCCCCTCGAGAG...TACCCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR TCA 90 bp CTACTGTGGGCCGAACTCAGGAGGAGCCCTAAAGCTAAGCCCTTGGGCTTGACACTTCCCGTCCAGTGGTaGCCAGTTACAATAACTCGC +
Preference number: 4 (lower is better)
Translates to: LLWAELRRSPKAKPLGLTLPVQW*PVTITR
Trigger: GCGAGTTATTGTAACTGGTCACCACTGGACGGGAAG...TGTCAAGCCCAAGGGCTTAGCTTTAGGGCTCCTCCTGAGTTCGGCCCACAGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp CAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCATTTGCCCAGGAGGTCTaGGGATTCACTGTCCCCATC +
Preference number: 4 (lower is better)
Translates to: QLSLELWSAWGWISSDSPFAQEV*GFTVPI
Trigger: GATGGGGACAGTGAATCCGCAGACCTCCTGGGCAAA...TGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp AGAAAGCAACCCTGTGGCCCTGTTGACCACCTAGTCCGGGAGAGTGTGGAGGTATGGTCCCACAGTACTTaGCAATCAGGGGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: RKQPCGPVDHLVRESVEVWSHST*QSGGQH
Trigger: ATGTTGGCCCCCTGATTGGCAAGTACTGTGGGACCA...TACCTCCACACTCTCCCGGACTAGGTGGTCAACAGGGCCACAGGGTTGCTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp TACAGGAATGTCAATCATTTCGCAGGCATGCCTGGCCCCAAATGCATGACTGGAGCTAACCAGGCGGGCTaGACTGGGGCTCCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: YRNVNHFAGMPGPKCMTGANQAG*TGAPEV
Trigger: TACCTCTGGAGCCCCAGTGCAGCCCGCCTGGTTAGC...TCCAGTCATGCATTTGGGGCCAGGCATGCCTGCGAAATGATTGACATTCCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR GCA 90 bp AGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGAGTTCACACAGAAGGTACTGGAACTCCATaGACACCGGGCTTCGGGGCA +
Preference number: 4 (lower is better)
Translates to: RVLRVGDPGKRCLRVHTEGTGTP*TPGFGA
Trigger: TGCCCCGAAGCCCGGTGTGCATGGAGTTCCAGTACC...TTCTGTGTGAACTCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp TCCAGGCTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGGGGACATAATTTCTCAATaGCACACCTCTATGGGGCAC +
Preference number: 4 (lower is better)
Translates to: SRLPLTSPGRLPTERRYGDIISQ*HTSMGH
Trigger: GTGCCCCATAGAGGTGTGGCATTGAGAAATTATGTC...CCCATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAGCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR GCA 90 bp AAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTGTTGCTGCTGCTGGTaGGGCGGCGGTGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: KLTFFCRLLLEIPRTYQLCCCCW*GGGGGW
Trigger: CCAGCCGCCACCGCCGCCGCACCAGCAGCAGCAACA...AAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp CAAGGAGATGGGTCAGCTAGCCTACCCACAGATAAAGATAACAAACACACCAAGGGAAGGCGGCCGCCCTaGTCTTGTCCTCGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: QGDGSASLPTDKDNKHTKGRRPP*SCPRRV
Trigger: AACCCGGCGAGGACAAGAGCAGGGCGGCCGCCTTCC...CTTGGTGTGTTTGTTATCTTTATCTGTGGGTAGGCTAGCTGACCCATCTCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GTTTTGTCCCAGCAGAGAACACAGCCCCGTTCCTGCAATGACTTAGCCACCGCGAGGTGCAATCCGTCATaGCTCGGAGCAGCACTTTTG +
Preference number: 4 (lower is better)
Translates to: VLSQQRTQPRSCNDLATARCNPS*LGAALL
Trigger: CAAAAGTGCTGCTCCGAGGCATGACGGATTGCACCT...CGCGGTGGCTAAGTCATTGCAGGAACGGGGCTGTGTTCTCTGCTGGGACAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp TCAAGTTCCCGTGATCTGGCTCAGCCAGTGAATGGTCGAATACCTCTAACTGCACATCCCCTGTGCGGCTaGATCTCCCTTCCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: SSSRDLAQPVNGRIPLTAHPLCG*ISLPPA
Trigger: CGCAGGAGGAAGGGAGATGCAGCCGCACAGGGGATG...TGCAGTTAGAGGTATTCGACCATTCACTGGCTGAGCCAGATCACGGGAACTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTTCCGCACGGTGGGTCTaGTTGGCCTCTCACTTGGTG +
Preference number: 4 (lower is better)
Translates to: GWLGLIRVLRVGDPGKRCSARWV*LASHLV
Trigger: CACCAAGTGAGAGGCCAACCAGACCCACCGTGCGGA...ACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp TACAGGAATGTCAATCATTTCGCAGGCATGCCTGGCCCCAAATGCATGACTGGACCAGGCGGGCTGCACTaGGGCTCCAGAGGTATTCCT +
Preference number: 4 (lower is better)
Translates to: YRNVNHFAGMPGPKCMTGPGGLH*GSRGIP
Trigger: AGGAATACCTCTGGAGCCCCAGTGCAGCCCGCCTGG...TCCAGTCATGCATTTGGGGCCAGGCATGCCTGCGAAATGATTGACATTCCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CCA 90 bp CAAGCGAACCAGTCTCTGGAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTCCCTTCGAACAGCTTTaGCTGCTGGGTCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: QANQSLEQNQLSLELWSAPFEQL*LLGPGV
Trigger: GACCCCAGGACCCAGCAGCCAAAGCTGTTCGAAGGG...AGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAGAGACTGGTTCGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp GAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGCGGTGGGGTAGGGGGTaGTTGTCTCTTCGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: EQNQLSLELWSAWGWISSRWGRG*LSLRSS
Trigger: TGAAGAGCGAAGAGACAACCACCCCCTACCCCACCG...CGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp GATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGAGTTCACACTGGCCTCCTCTTCGGTaGGGTAGGGGGTGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: DKSAQGWGSGKEMSESSHWPPLR*GRGWLS
Trigger: AGACAACCACCCCCTACCCCACCGAAGAGGAGGCCA...GTGTGAACTCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp CTACTGTGGGCCGAACTCAGGAGGAGCCCTAAAGCTAAGCCCTTGGGCTTGACACGGAGCCACTTGGCATaGTCATACATCCAACCACAG +
Preference number: 4 (lower is better)
Translates to: LLWAELRRSPKAKPLGLTRSHLA*SYIQPQ
Trigger: CTGTGGTTGGATGTATGACCATGCCAAGTGGCTCCG...TGTCAAGCCCAAGGGCTTAGCTTTAGGGCTCCTCCTGAGTTCGGCCCACAGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GTTGTACATAACTTAGAGGTGAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGATTGGGCTGGAGCTGCTaGCCCAGGTGGTCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: VVHNLEVKCRSETGLDFGLGWSC*PRWSGA
Trigger: GGCTCCGGACCACCTGGGCCAGCAGCTCCAGCCCAA...TCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTCACCTCTAAGTTATGTACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAAACGTCCGGTCGTTTaGGCTGGAGCTGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: WLGLIRVLRVGDPGKRCLKRPVV*AGAAGP
Trigger: TGGGCCAGCAGCTCCAGCCCAAACGACCGGACGTTT...CAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp AGGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTACTGGCCCTCTCTCTaGCTGTCACTCTGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: RMVGIDKSAQGWGSGKEMYWPSL*LSLCSR
Trigger: GCGGCTGCAGAGTGACAGCCAGAGAGAGGGCCAGTA...CATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp TTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGACCCGTGGCCTGGTACTaGAACTCCATGCACACCGGG +
Preference number: 4 (lower is better)
Translates to: LGLIRVLRVGDPGKRCLRPVAWY*NSMHTG
Trigger: CCCGGTGTGCATGGAGTTCCAGTACCAGGCCACGGG...TCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp GATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGAGTTCACACACTTGCTCTCCTGGCTaGCTTCCCGCACCACCTGCA +
Preference number: 4 (lower is better)
Translates to: DKSAQGWGSGKEMSESSHTCSPG*LPAPPA
Trigger: TGCAGGTGGTGCGGGAAGCCAGCCAGGAGAGCAAGT...GTGTGAACTCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp AGGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGACTTGCTCTCCTGGCTaGCTTCCCGCACCACCTGCA +
Preference number: 4 (lower is better)
Translates to: RMVGIDKSAQGWGSGKEMTCSPG*LPAPPA
Trigger: TGCAGGTGGTGCGGGAAGCCAGCCAGGAGAGCAAGT...CATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp AGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCAAGATGCAGCATTATTCCACTCGCCGCCCTaGTCCTCACGGATGACCCAC +
Preference number: 4 (lower is better)
Translates to: SCGVLGGGSLRIVQDAALFHSPP*SSRMTH
Trigger: GTGGGTCATCCGTGAGGACCAGGGCGGCGAGTGGAA...TAATGCTGCATCTTGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp TGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGACCAGTAGGCTGGGATaGGCTGCATGGGCACCGTGT +
Preference number: 4 (lower is better)
Translates to: WLGLIRVLRVGDPGKRCLTSRLG*AAWAPC
Trigger: ACACGGTGCCCATGCAGCCCATCCCAGCCTACTGGT...CAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp CAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCAGTAATACCAGTAGGCTaGGATGGGCTGCATGGGCAC +
Preference number: 4 (lower is better)
Translates to: QLSLELWSAWGWISSDSPVIPVG*DGLHGH
Trigger: GTGCCCATGCAGCCCATCCCAGCCTACTGGTATTAC...TGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp GACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGCACTTTCGGCTGAGGATGTGCTaGGGGCCGGCTGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: DTVGLELANGSYSLTKHFRLRMC*GPAAGW
Trigger: CCAGCCTGCAGCCGGCCCCCAGCACATCCTCAGCCG...AAAGTGCTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp AGAAAGCAACCCTGTGGCCCTGTTGACCACCTAGTCCGGGAGAGTGTGGAGGTACCCAGCCCCTCTTGCTaGAATGAAACGTCAGATAGG +
Preference number: 4 (lower is better)
Translates to: RKQPCGPVDHLVRESVEVPSPSC*NETSDR
Trigger: CCTATCTGACGTTTCATTCCAGCAAGAGGGGCTGGG...TACCTCCACACTCTCCCGGACTAGGTGGTCAACAGGGCCACAGGGTTGCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GTTTTGTCCCAGCAGAGAACACAGCCCCGTTCCTGCAATGACTTAGCCACCGCGGGATCAGCAGTGAGTTaGGGTACTTGGGAATGGAGC +
Preference number: 4 (lower is better)
Translates to: VLSQQRTQPRSCNDLATAGSAVS*GTWEWS
Trigger: GCTCCATTCCCAAGTACCCCAACTCACTGCTGATCC...CGCGGTGGCTAAGTCATTGCAGGAACGGGGCTGTGTTCTCTGCTGGGACAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp ATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGACCGCCATGTCCGTGTaGAAGGTCAGGGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: MGHHQSQLPVPHLASLLRTAMSV*KVRERI
Trigger: GATCCTCTCCCTGACCTTTCACACGGACATGGCGGT...CCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR TCA 90 bp TCCAGGCTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGGGATCAGAGTAGGTAGATaGGGCACTGATCTGTTCATT +
Preference number: 4 (lower is better)
Translates to: SRLPLTSPGRLPTERRYGIRVGR*GTDLFI
Trigger: AATGAACAGATCAGTGCCTCATCTACCTACTCTGAT...CCCATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAGCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp AGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTCTGAACACTGCGCATCAAGCAGGGAGCATCTGTaGCCCGGCAGCCGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: RLLLEIPRTYQLSEHCASSREHL*PGSRRA
Trigger: AGCTCTTCGGCTGCCGGGTCACAGATGCTCCCTGCT...TGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp AGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACACCACCGTCTGCAATGAGGCCTaGGAGCATCCCCAGCATGTT +
Preference number: 4 (lower is better)
Translates to: SAKISCDTRTLGQSHNTTVCNEA*EHPQHV
Trigger: AACATGCTGGGGATGCTCTCAGGCCTCATTGCAGAC...GGTGGTGTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp CCAGAAACCAAAATGAACCCAAGGAGGATGGTTGGGATTGATAAGAGTGCTCAGTCACCGGGCTGGGCCTaGGGGATTCGAGGGAACCAG +
Preference number: 4 (lower is better)
Translates to: PETKMNPRRMVGIDKSAQSPGWA*GIRGNQ
Trigger: CTGGTTCCCTCGAATCCCTCAGGCCCAGCCCGGTGA...CTGAGCACTCTTATCAATCCCAACCATCCTCCTTGGGTTCATTTTGGTTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp TACAGGAATGTCAATCATTTCGCAGGCATGCCTGGCCCCAAATGCATGACTGGAGTTCCCAGATCTACCTaGAGCCACTCCTCACCGGGC +
Preference number: 4 (lower is better)
Translates to: YRNVNHFAGMPGPKCMTGVPRST*SHSSPG
Trigger: GCCCGGTGAGGAGTGGCTTCAGGTAGATCTGGGAAC...TCCAGTCATGCATTTGGGGCCAGGCATGCCTGCGAAATGATTGACATTCCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR TCA 90 bp AGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCAAGATGCAGCATTATGGCTTCCACAGCAGTaGTACTGTCTCCTCCGCGGG +
Preference number: 4 (lower is better)
Translates to: SCGVLGGGSLRIVQDAALWLPQQ*YCLLRG
Trigger: CCCGCGGAGGAGACAGTATCACTGCTGTGGAAGCCA...TAATGCTGCATCTTGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp GGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCCTGGTCCTCACGGATaGCCCACAGCAACTTGCTCT +
Preference number: 4 (lower is better)
Translates to: GWLGLIRVLRVGDPGKRCPGPHG*PTATCS
Trigger: AGAGCAAGTTGCTGTGGGTCATCCGTGAGGACCAGG...ACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp CAAGCGAACCAGTCTCTGGAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTCCTGGTCCTCACGGATaGCCCACAGCAACTTGCTCT +
Preference number: 4 (lower is better)
Translates to: QANQSLEQNQLSLELWSAPGPHG*PTATCS
Trigger: AGAGCAAGTTGCTGTGGGTCATCCGTGAGGACCAGG...AGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAGAGACTGGTTCGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp CTCAAGGCTGAAGCAGCATGGTTAAGCATTCTTGTCCACAGTACTTGCGGACTTCGTAGCTGGGCAGGATaGTCCGCCCGTGCTTCCACT +
Preference number: 4 (lower is better)
Translates to: LKAEAAWLSILVHSTCGLRSWAG*SARAST
Trigger: AGTGGAAGCACGGGCGGATCATCCTGCCCAGCTACG...AAGTCCGCAAGTACTGTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp AGGACTTACCAGCTTTCTGAACACTGCGCATCATGGGAGGGTGAAGAGGAAAAGCAGGAGGACGCCCAGTaGGCTCATGGCGATGATGGT +
Preference number: 4 (lower is better)
Translates to: RTYQLSEHCASWEGEEEKQEDAQ*AHGDDG
Trigger: ACCATCATCGCCATGAGCTCACTGGGCGTCCTCCTG...CTTTTCCTCTTCACCCTCCCATGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp AGAAAGCAACCCTGTGGCCCTGTTGACCACCTAGTCCGGGAGAGTGTGGAGGTATCACAACACCACCACTaGGTCCCACATGACCATTCA +
Preference number: 4 (lower is better)
Translates to: RKQPCGPVDHLVRESVEVSQHHH*VPHDHS
Trigger: TGAATGGTCATGTGGGACTCAGTGGTGGTGTTGTGA...TACCTCCACACTCTCCCGGACTAGGTGGTCAACAGGGCCACAGGGTTGCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GAATCATCAGGGTATATGGTAACTCAGCTGGTCACTACACTGGCTGTATTTTCCGCGCAGAGAGAAGCCTaGCCCCTGCCGGGCGTAGTC +
Preference number: 4 (lower is better)
Translates to: ESSGYMVTQLVTTLAVFSAQREA*PLPGVV
Trigger: GACTACGCCCGGCAGGGGGCAGGCTTCTCTCTGCGC...GGAAAATACAGCCAGTGTAGTGACCAGCTGAGTTACCATATACCCTGATGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR GCA 90 bp GTGCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTGCGCAGAGAGAAGCCTaGCCCCTGCCGGGCGTAGTC +
Preference number: 4 (lower is better)
Translates to: VQNRGNMFAVFLVCFGCCAQREA*PLPGVV
Trigger: GACTACGCCCGGCAGGGGGCAGGCTTCTCTCTGCGC...ACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp GACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGCACTTTGCGCAGAGAGAAGCCTaGCCCCTGCCGGGCGTAGTC +
Preference number: 4 (lower is better)
Translates to: DTVGLELANGSYSLTKHFAQREA*PLPGVV
Trigger: GACTACGCCCGGCAGGGGGCAGGCTTCTCTCTGCGC...AAAGTGCTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCTCAACTGCGCAGAGAGAAGCCTaGCCCCTGCCGGGCGTAGTC +
Preference number: 4 (lower is better)
Translates to: GFQELDDDCLDGTSSVSTAQREA*PLPGVV
Trigger: GACTACGCCCGGCAGGGGGCAGGCTTCTCTCTGCGC...AGTTGAGACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR GCA 90 bp AAACAAGCGAACCAGTCTCTGGAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTAACCAGGCGGGCTaGACTGGGGCTCCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: KQANQSLEQNQLSLELWSANQAG*TGAPEV
Trigger: TACCTCTGGAGCCCCAGTGCAGCCCGCCTGGTTAGC...ACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAGAGACTGGTTCGCTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp GTGCCGAGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACTACCCGCACATACTGTaGCGGAATGGGGTCAAACCT +
Preference number: 4 (lower is better)
Translates to: VPSAKISCDTRTLGQSHNYPHIL*RNGVKP
Trigger: AGGTTTGACCCCATTCCGGCACAGTATGTGCGGGTA...GTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACTCGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp AGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCAAGATGCAGCATTATTCGGCCCTCAGCAGTaGGAGCCACGGTCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: SCGVLGGGSLRIVQDAALFGPQQ*EPRSCS
Trigger: AGAGCAAGACCGTGGCTCGCACTGCTGAGGGCCGAA...TAATGCTGCATCTTGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp AGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGAGTTCACACAGAACGTCTCCTGGCAGACTaGCCACTGAGAGGAGGTATG +
Preference number: 4 (lower is better)
Translates to: RVLRVGDPGKRCLRVHTERLLAD*PLRGGM
Trigger: CATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACG...TTCTGTGTGAACTCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp GATCCAGGCTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGGCAACTCTAAACACATaGATGCATGCATTCGCCTGT +
Preference number: 4 (lower is better)
Translates to: DPGFPSRLLADCPLRGGMATLNT*MHAFAC
Trigger: ACAGGCGAATGCATGCATGCATGTGTTTAGAGTTGC...CATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAGCCTGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR GCA 90 bp TTTATTGGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCGTGCTGGGGGCCGGCTaGAGGCTGGTGCCTCGCTCG +
Preference number: 4 (lower is better)
Translates to: FIGFQELDDDCLDGTSSVVLGAG*RLVPRS
Trigger: CGAGCGAGGCACCAGCCTGCAGCCGGCCCCCAGCAC...GACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCCAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR GCA 90 bp GTTTTGTCCCAGCAGAGAACACAGCCCCGTTCCTGCAATGACTTAGCCACCGCGCAGATAGGATTCAGGTaGAATCCGTCATGCCTCGGA +
Preference number: 4 (lower is better)
Translates to: VLSQQRTQPRSCNDLATAQIGFR*NPSCLG
Trigger: TCCGAGGCATGACGGATTGCACCTGAATCCTATCTG...CGCGGTGGCTAAGTCATTGCAGGAACGGGGCTGTGTTCTCTGCTGGGACAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp AGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTCTGAACACTGCGCATCAACGACCTCCGCACGGTaGGTCTGGTTGGCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: RLLLEIPRTYQLSEHCASTTSAR*VWLASH
Trigger: GTGAGAGGCCAACCAGACCCACCGTGCGGAGGTCGT...TGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp ATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGCAGAGAAGCCATCCTTaGCCACCGCCATGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: MGHHQSQLPVPHLASLLRQRSHP*PPPCPC
Trigger: ACACGGACATGGCGGTGGCCAAGGATGGCTTCTCTG...CCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CCA 90 bp AGAAAGCAACCCTGTGGCCCTGTTGACCACCTAGTCCGGGAGAGTGTGGAGGTAAAACCTTGTCAGCAGTaGAGCGTGGAGCTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: RKQPCGPVDHLVRESVEVKPCQQ*SVELVQ
Trigger: CTGAACAAGCTCCACGCTCCACTGCTGACAAGGTTT...TACCTCCACACTCTCCCGGACTAGGTGGTCAACAGGGCCACAGGGTTGCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGAGTTCACACCCTCCGCGGGCTCCCTaGATGATGACACCTTTCACT +
Preference number: 4 (lower is better)
Translates to: DKSAQGWGSGKEMSESSHPPRAP*MMTPFT
Trigger: AGTGAAAGGTGTCATCATCCAGGGAGCCCGCGGAGG...GTGTGAACTCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp TTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGACCCTTCGAACAGCTTTaGCTGCTGGGTCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LGLIRVLRVGDPGKRCLRPFEQL*LLGPGV
Trigger: GACCCCAGGACCCAGCAGCCAAAGCTGTTCGAAGGG...TCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp CAAGCGAACCAGTCTCTGGAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTCCAGCGTCTCTACCGTaGGCTTGGAGTCTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: QANQSLEQNQLSLELWSAPASLP*AWSLSS
Trigger: ACTGGACAGACTCCAAGCCCACGGTAGAGACGCTGG...AGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAGAGACTGGTTCGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp AGGAGAAGTAACATAAGAGTTAAAGGGGCCCTCTCTGAACACTCACCCCTCGCCCTTCGCTCTTCACAGTaGGTCCCAGCGTCTCTACCG +
Preference number: 4 (lower is better)
Translates to: RRSNIRVKGALSEHSPLALRSSQ*VPASLP
Trigger: CGGTAGAGACGCTGGGACCCACTGTGAAGAGCGAAG...GGCGAGGGGTGAGTGTTCAGAGAGGGCCCCTTTAACTCTTATGTTACTTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp AGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGAGTTCACACAGAACGGTGGGGTAGGGGGTaGTTGTCTCTTCGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: RVLRVGDPGKRCLRVHTERWGRG*LSLRSS
Trigger: TGAAGAGCGAAGAGACAACCACCCCCTACCCCACCG...TTCTGTGTGAACTCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp AGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCAAGATGCAGCATTATCTCCCCACACTCTGTaGCCTCCTCTTCGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: SCGVLGGGSLRIVQDAALSPHTL*PPLRWG
Trigger: ACCCCACCGAAGAGGAGGCCACAGAGTGTGGGGAGA...TAATGCTGCATCTTGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp GAATCATCAGGGTATATGGTAACTCAGCTGGTCACTACACTGGCTGTATTTTCCTTGGGCTGGAGCTGCTaGCCCAGGTGGTCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: ESSGYMVTQLVTTLAVFSLGWSC*PRWSGA
Trigger: GGCTCCGGACCACCTGGGCCAGCAGCTCCAGCCCAA...GGAAAATACAGCCAGTGTAGTGACCAGCTGAGTTACCATATACCCTGATGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CCA 90 bp AGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCAAGATGCAGCATTAAAACGTCCGGTCGTTTaGGCTGGAGCTGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: SCGVLGGGSLRIVQDAALKRPVV*AGAAGP
Trigger: TGGGCCAGCAGCTCCAGCCCAAACGACCGGACGTTT...TAATGCTGCATCTTGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp CTCAAGGCTGAAGCAGCATGGTTAAGCATTCTTGTCCACAGTACTTGCGGACTTCCCGTGGCCTGGTACTaGAACTCCATGCACACCGGG +
Preference number: 4 (lower is better)
Translates to: LKAEAAWLSILVHSTCGLPVAWY*NSMHTG
Trigger: CCCGGTGTGCATGGAGTTCCAGTACCAGGCCACGGG...AAGTCCGCAAGTACTGTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp AGAAAGCAACCCTGTGGCCCTGTTGACCACCTAGTCCGGGAGAGTGTGGAGGTACATGCAGTTCTCCAGTaGGACATCAGTGCTTATCCG +
Preference number: 4 (lower is better)
Translates to: RKQPCGPVDHLVRESVEVHAVLQ*DISAYP
Trigger: CGGATAAGCACTGATGTCCCACTGGAGAACTGCATG...TACCTCCACACTCTCCCGGACTAGGTGGTCAACAGGGCCACAGGGTTGCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCAGAGTTGTGGAGTGCTTaGGGGTGGATCTCTTCGGAT +
Preference number: 4 (lower is better)
Translates to: QLSLELWSAWGWISSDSPELWSA*GWISSD
Trigger: ATCCGAAGAGATCCACCCCCAAGCACTCCACAACTC...TGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp GCCACACCTCTATGGGGCACCTACAGGAATGTCAATCATTTCGCAGGCATGCCTCATCACATGGTACCCTaGGCTGATCCCCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: ATPLWGTYRNVNHFAGMPHHMVP*ADPLST
Trigger: AGTGGAGAGGGGATCAGCCCAGGGTACCATGTGATG...AGGCATGCCTGCGAAATGATTGACATTCCTGTAGGTGCCCCATAGAGGTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CCA 90 bp GAGTGGCTTTCAAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGAACGGCTACACCCGCTTaGCCAGCCTCTCGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: EWLSNLPSSAGYFWKSLGTATPA*PASRGE
Trigger: CTCCCCTCGAGAGGCTGGCCAAGCGGGTGTAGCCGT...TCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp AGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACACCACCGTGAGTTGGGGTACTTaGGAATGGAGCCATCGGGGT +
Preference number: 4 (lower is better)
Translates to: SAKISCDTRTLGQSHNTTVSWGT*EWSHRG
Trigger: ACCCCGATGGCTCCATTCCCAAGTACCCCAACTCAC...GGTGGTGTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GTGCCGAGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACGGATCAGCAGTGAGTTaGGGTACTTGGGAATGGAGC +
Preference number: 4 (lower is better)
Translates to: VPSAKISCDTRTLGQSHNGSAVS*GTWEWS
Trigger: GCTCCATTCCCAAGTACCCCAACTCACTGCTGATCC...GTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACTCGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp ACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGGTAACAGGAGAGTAGCTCCTTaGGCATCACACGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: TSSVSTPCTTLSLPVEGNRRVAP*ASHGPQ
Trigger: CTGGGGGCCGTGTGATGCCCAAGGAGCTACTCTCCT...GTTACCCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CCA 90 bp ATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGAGAACAGCCTACCTTTaGCTGCTGGGTCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: MGHHQSQLPVPHLASLLRRTAYL*LLGPGV
Trigger: GACCCCAGGACCCAGCAGCCAAAGGTAGGCTGTTCT...CCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR TCA 90 bp GATCCAGGCTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGTTCTCGATTTCAAAGTaGGGGTTGAAGTTGAGGACA +
Preference number: 4 (lower is better)
Translates to: DPGFPSRLLADCPLRGGMFSISK*GLKLRT
Trigger: TGTCCTCAACTTCAACCCTCACTTTGAAATCGAGAA...CATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAGCCTGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp CAAGCGAACCAGTCTCTGGAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTGAGGATCCCCGTCGATaGACGAAGTTCAGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: QANQSLEQNQLSLELWSAEDPRR*TKFRGC
Trigger: ACACCCTCTGAACTTCGTTCATCGACGGGGATCCTC...AGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAGAGACTGGTTCGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp TCAAGTTCCCGTGATCTGGCTCAGCCAGTGAATGGTCGAATACCTCTAACTGCAACCGCCATGTCCGTGTaGAAGGTCAGGGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: SSSRDLAQPVNGRIPLTATAMSV*KVRERI
Trigger: GATCCTCTCCCTGACCTTTCACACGGACATGGCGGT...TGCAGTTAGAGGTATTCGACCATTCACTGGCTGAGCCAGATCACGGGAACTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp CTCTGTTCTCCTTCCCGTCCAGTGGTGACCAGTTACAATAACTCGCTGATGGGGGTGTTGCGATGGCCGTaGGCATGGTTAAAAAGCGCA +
Preference number: 4 (lower is better)
Translates to: LCSPSRPVVTSYNNSLMGVLRWP*AWLKSA
Trigger: TGCGCTTTTTAACCATGCTCACGGCCATCGCAACAC...CCCCATCAGCGAGTTATTGTAACTGGTCACCACTGGACGGGAAGGAGAACAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp AGGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGCCTGAGTGCCAGGTCTaGGGGCGGATTCTAACAAAC +
Preference number: 4 (lower is better)
Translates to: RMVGIDKSAQGWGSGKEMPECQV*GRILTN
Trigger: GTTTGTTAGAATCCGCCCTCAGACCTGGCACTCAGG...CATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp GTCCAGGCGCTTCTATGGATTTTGACGTGTGAAGTTTCCTTTCCAGTTTGTTTTCCGGAGGGCGATACCTaGGTGCCAGGTCTGAGGGCG +
Preference number: 4 (lower is better)
Translates to: VQALLWILTCEVSFPVCFPEGDT*VPGLRA
Trigger: CGCCCTCAGACCTGGCACTCAGGTATCGCCCTCCGG...AAAACAAACTGGAAAGGAAACTTCACACGTCAAAATCCATAGAAGCGCCTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp TTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCTCAACTCCCAGCAGGGAGCATCTGTaGCCCGGCAGCCGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: FQELDDDCLDGTSSVSTPSREHL*PGSRRA
Trigger: AGCTCTTCGGCTGCCGGGTCACAGATGCTCCCTGCT...GGGAGTTGAGACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR TCA 90 bp AGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGAGTTCACACAGAAGTCTGCAATGAGGCCTaGGAGCATCCCCAGCATGTT +
Preference number: 4 (lower is better)
Translates to: RVLRVGDPGKRCLRVHTEVCNEA*EHPQHV
Trigger: AACATGCTGGGGATGCTCTCAGGCCTCATTGCAGAC...TTCTGTGTGAACTCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp GATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGTCTGCAATGAGGCCTaGGAGCATCCCCAGCATGTT +
Preference number: 4 (lower is better)
Translates to: DGTSSVSTPCTTLSLPVEVCNEA*EHPQHV
Trigger: AACATGCTGGGGATGCTCTCAGGCCTCATTGCAGAC...CTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR TCA 90 bp AATGTCAATCATTTCGCAGGCATGCCTGGCCCCAAATGCATGACTGGATGTGGATCTGGGAGTCTGCAATaGGGCCTGAGAGCATCCCCA +
Preference number: 4 (lower is better)
Translates to: NVNHFAGMPGPKCMTGCGSGSLQ*GLRASP
Trigger: TGGGGATGCTCTCAGGCCTCATTGCAGACTCCCAGA...TCCACATCCAGTCATGCATTTGGGGCCAGGCATGCCTGCGAAATGATTGACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR TCA 90 bp CTCAAGGCTGAAGCAGCATGGTTAAGCATTCTTGTCCACAGTACTTGCGGACTTGTTCCCAGATCTACCTaGAGCCACTCCTCACCGGGC +
Preference number: 4 (lower is better)
Translates to: LKAEAAWLSILVHSTCGLVPRST*SHSSPG
Trigger: GCCCGGTGAGGAGTGGCTTCAGGTAGATCTGGGAAC...AAGTCCGCAAGTACTGTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp CTCAAGGCTGAAGCAGCATGGTTAAGCATTCTTGTCCACAGTACTTGCGGACTTTGGCTTCCACAGCAGTaGTACTGTCTCCTCCGCGGG +
Preference number: 4 (lower is better)
Translates to: LKAEAAWLSILVHSTCGLWLPQQ*YCLLRG
Trigger: CCCGCGGAGGAGACAGTATCACTGCTGTGGAAGCCA...AAGTCCGCAAGTACTGTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp CTCTATGGGGCACCTACAGGAATGTCAATCATTTCGCAGGCATGCCTGGCCCCATGGAACAAAACCAGCTaGGCCTTGAGTTGTGGAGTG +
Preference number: 4 (lower is better)
Translates to: LYGAPTGMSIISQACLAPWNKTS*ALSCGV
Trigger: CACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCA...TGGGGCCAGGCATGCCTGCGAAATGATTGACATTCCTGTAGGTGCCCCATAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR TCA 90 bp GGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTTGGCAGACTGCCCACTaGGAGGAGGTATGGGATAAG +
Preference number: 4 (lower is better)
Translates to: GWLGLIRVLRVGDPGKRCWQTAH*EEVWDK
Trigger: CTTATCCCATACCTCCTCTCAGTGGGCAGTCTGCCA...ACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp GAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAGAACTGTAAAATGGCTCACTCTCTCGAGGGGAGTCTaGGGAAGGAAGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: EVQVRNRARLWRTVKWLTLSRGV*GRKLLL
Trigger: CAGCAGCAGCTTCCTTCCTCAGACTCCCCTCGAGAG...AGTGAGCCATTTTACAGTTCTCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp ACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGGTAACCCCCAGGCAGCTGTGTaGTCTCAGAGGCGTAAACTG +
Preference number: 4 (lower is better)
Translates to: TSSVSTPCTTLSLPVEGNPQAAV*SQRRKL
Trigger: CAGTTTACGCCTCTGAGATCACACAGCTGCCTGGGG...GTTACCCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR TCA 90 bp CATTCACCCTTCCCCTTTCACCTGGGTATAAGACAAATGAAATCGTGGGTGACCCAGGAGGACGCCCAGTaGGCTCATGGCGATGATGGT +
Preference number: 4 (lower is better)
Translates to: HSPFPFHLGIRQMKSWVTQEDAQ*AHGDDG
Trigger: ACCATCATCGCCATGAGCTCACTGGGCGTCCTCCTG...GGTCACCCACGATTTCATTTGTCTTATACCCAGGTGAAAGGGGAAGGGTGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GTTTTGTCCCAGCAGAGAACACAGCCCCGTTCCTGCAATGACTTAGCCACCGCGCCTGATGCCTCCCTTTaGAGAGTAGTTGAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: VLSQQRTQPRSCNDLATAPDASL*RVVESH
Trigger: ATGACTCTCAACTACTCTTCAAAGGGAGGCATCAGG...CGCGGTGGCTAAGTCATTGCAGGAACGGGGCTGTGTTCTCTGCTGGGACAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GTGCCGAGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACGTTTCCCAAAGGGAATaGCTCAAGGAGATGGGTCAG +
Preference number: 4 (lower is better)
Translates to: VPSAKISCDTRTLGQSHNVSQRE*LKEMGQ
Trigger: CTGACCCATCTCCTTGAGTCATTCCCTTTGGGAAAC...GTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACTCGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GTCCAGGCGCTTCTATGGATTTTGACGTGTGAAGTTTCCTTTCCAGTTTGTTTTGCGCAGAGAGAAGCCTaGCCCCTGCCGGGCGTAGTC +
Preference number: 4 (lower is better)
Translates to: VQALLWILTCEVSFPVCFAQREA*PLPGVV
Trigger: GACTACGCCCGGCAGGGGGCAGGCTTCTCTCTGCGC...AAAACAAACTGGAAAGGAAACTTCACACGTCAAAATCCATAGAAGCGCCTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GTGCCGAGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACTTGTGGTTTTTGCCATaGCGGTACACCATCCAGTCC +
Preference number: 4 (lower is better)
Translates to: VPSAKISCDTRTLGQSHNLWFLP*RYTIQS
Trigger: GGACTGGATGGTGTACCGGCATGGCAAAAACCACAA...GTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACTCGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GAGTGGCTTTCAAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGAGCTAACCAGGCGGGCTaGACTGGGGCTCCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: EWLSNLPSSAGYFWKSLGANQAG*TGAPEV
Trigger: TACCTCTGGAGCCCCAGTGCAGCCCGCCTGGTTAGC...TCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GTTTTGTCCCAGCAGAGAACACAGCCCCGTTCCTGCAATGACTTAGCCACCGCGTGTATTCCCAGTCCTTaGCGTTTAGGCTGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: VLSQQRTQPRSCNDLATACIPSP*RLGCRR
Trigger: TCTCCTACAGCCTAAACGGCAAGGACTGGGAATACA...CGCGGTGGCTAAGTCATTGCAGGAACGGGGCTGTGTTCTCTGCTGGGACAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAGAACTGTAAAATGGCTCACTGGTACTGGAACTCCATaGACACCGGGCTTCGGGGCA +
Preference number: 4 (lower is better)
Translates to: EVQVRNRARLWRTVKWLTGTGTP*TPGFGA
Trigger: TGCCCCGAAGCCCGGTGTGCATGGAGTTCCAGTACC...AGTGAGCCATTTTACAGTTCTCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp CAGCCGCTCTCTCACACACCCACACACAGAGAGCTATTCACACACACACATGTCCCGAGATGGGTTCCATaGAGTTCTCCAGTGGGACAT +
Preference number: 4 (lower is better)
Translates to: QPLSHTPTHRELFTHTHVPRWVP*SSPVGH
Trigger: ATGTCCCACTGGAGAACTGCATGGAACCCATCTCGG...GACATGTGTGTGTGTGAATAGCTCTCTGTGTGTGGGTGTGTGAGAGAGCGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp CAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCATGCGAGCCACGGTCTTaGTCTAGCTTAATGGTTAGG +
Preference number: 4 (lower is better)
Translates to: QLSLELWSAWGWISSDSPCEPRS*SSLMVR
Trigger: CCTAACCATTAAGCTAGAGCAAGACCGTGGCTCGCA...TGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp AGAAGTAACATAAGAGTTAAAGGGGCCCTCTCTGAACACTCACCCCTCGCCCAACGTCTCCTGGCAGACTaGCCACTGAGAGGAGGTATG +
Preference number: 4 (lower is better)
Translates to: RSNIRVKGALSEHSPLAQRLLAD*PLRGGM
Trigger: CATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACG...TTGGGCGAGGGGTGAGTGTTCAGAGAGGGCCCCTTTAACTCTTATGTTACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp GTTGTACATAACTTAGAGGTGAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGACATCCCCTGTGCGGCTaGATCTCCCTTCCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: VVHNLEVKCRSETGLDFGHPLCG*ISLPPA
Trigger: CGCAGGAGGAAGGGAGATGCAGCCGCACAGGGGATG...TCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTCACCTCTAAGTTATGTACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp TCAAGTTCCCGTGATCTGGCTCAGCCAGTGAATGGTCGAATACCTCTAACTGCAACACAGCCCCGTTCCTaGAATGACTTAGCCACCGCG +
Preference number: 4 (lower is better)
Translates to: SSSRDLAQPVNGRIPLTATQPRS*NDLATA
Trigger: CGCGGTGGCTAAGTCATTGCAGGAACGGGGCTGTGT...TGCAGTTAGAGGTATTCGACCATTCACTGGCTGAGCCAGATCACGGGAACTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCAGGGGGCCAACATGTaGAATGCCATCCCAGATGTC +
Preference number: 4 (lower is better)
Translates to: GWLGLIRVLRVGDPGKRCQGANM*NAIPDV
Trigger: GACATCTGGGATGGCATTCCACATGTTGGCCCCCTG...ACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp AGAAAGCAACCCTGTGGCCCTGTTGACCACCTAGTCCGGGAGAGTGTGGAGGTAGTTCAGAGGGTGTTTTaGTCCCACAGTACTTGCCAA +
Preference number: 4 (lower is better)
Translates to: RKQPCGPVDHLVRESVEVVQRVF*SHSTCQ
Trigger: TTGGCAAGTACTGTGGGACCAAAACACCCTCTGAAC...TACCTCCACACTCTCCCGGACTAGGTGGTCAACAGGGCCACAGGGTTGCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTGTCAGCAGTGGAGCGTaGAGCTTGTTCAGAACCACC +
Preference number: 4 (lower is better)
Translates to: GWLGLIRVLRVGDPGKRCVSSGA*SLFRTT
Trigger: GGTGGTTCTGAACAAGCTCCACGCTCCACTGCTGAC...ACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp GGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGGTAGAAGAGGCGGAGATCTaGGAGTCTGCAATGAGGCCT +
Preference number: 4 (lower is better)
Translates to: GHHQSQLPVPHLASLLRVEEAEI*ESAMRP
Trigger: AGGCCTCATTGCAGACTCCCAGATCTCCGCCTCTTC...TACCCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CCA 90 bp CAAGCGAACCAGTCTCTGGAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTCTCCAGAGGTATTCCTaGGTGGAAGAGGCGGAGATC +
Preference number: 4 (lower is better)
Translates to: QANQSLEQNQLSLELWSALQRYS*VEEAEI
Trigger: GATCTCCGCCTCTTCCACCCAGGAATACCTCTGGAG...AGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAGAGACTGGTTCGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp AGGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGCTCCAGAGGTATTCCTaGGTGGAAGAGGCGGAGATC +
Preference number: 4 (lower is better)
Translates to: RMVGIDKSAQGWGSGKEMLQRYS*VEEAEI
Trigger: GATCTCCGCCTCTTCCACCCAGGAATACCTCTGGAG...CATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp GTTTTGTCCCAGCAGAGAACACAGCCCCGTTCCTGCAATGACTTAGCCACCGCGCACCTTTCACTGTCTTaGGTGTTCCCAGATCTACCT +
Preference number: 4 (lower is better)
Translates to: VLSQQRTQPRSCNDLATAHLSLS*VFPDLP
Trigger: AGGTAGATCTGGGAACACCCAAGACAGTGAAAGGTG...CGCGGTGGCTAAGTCATTGCAGGAACGGGGCTGTGTTCTCTGCTGGGACAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TCAAGTTCCCGTGATCTGGCTCAGCCAGTGAATGGTCGAATACCTCTAACTGCACCTCCGCGGGCTCCCTaGATGATGACACCTTTCACT +
Preference number: 4 (lower is better)
Translates to: SSSRDLAQPVNGRIPLTAPPRAP*MMTPFT
Trigger: AGTGAAAGGTGTCATCATCCAGGGAGCCCGCGGAGG...TGCAGTTAGAGGTATTCGACCATTCACTGGCTGAGCCAGATCACGGGAACTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTTTGGCTGCTGGGTCCTaGGGTCCTGAATGTATTCCC +
Preference number: 4 (lower is better)
Translates to: GWLGLIRVLRVGDPGKRCLAAGS*GPECIP
Trigger: GGGAATACATTCAGGACCCCAGGACCCAGCAGCCAA...ACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp CAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCACATACTGTGCCGGAATaGGGTCAAACCTTCGGATGT +
Preference number: 4 (lower is better)
Translates to: QLSLELWSAWGWISSDSPHTVPE*GQTFGC
Trigger: ACATCCGAAGGTTTGACCCCATTCCGGCACAGTATG...TGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp TGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGTCTCTACCGTGGGCTTaGAGTCTGTCCAGTCACAGC +
Preference number: 4 (lower is better)
Translates to: WLGLIRVLRVGDPGKRCLSLPWA*SLSSHS
Trigger: GCTGTGACTGGACAGACTCCAAGCCCACGGTAGAGA...CAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp AGAAGTAACATAAGAGTTAAAGGGGCCCTCTCTGAACACTCACCCCTCGCCCAACCAGCGTCTCTACCGTaGGCTTGGAGTCTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: RSNIRVKGALSEHSPLAQPASLP*AWSLSS
Trigger: ACTGGACAGACTCCAAGCCCACGGTAGAGACGCTGG...TTGGGCGAGGGGTGAGTGTTCAGAGAGGGCCCCTTTAACTCTTATGTTACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp GCAGGACTCATTCCTTTAATAGGATCAGCAGTGAGTTGGGGTACTTGGGAATGGTGGCCTCCTCTTCGGTaGGGTAGGGGGTGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: AGLIPLIGSAVSWGTWEWWPPLR*GRGWLS
Trigger: AGACAACCACCCCCTACCCCACCGAAGAGGAGGCCA...CCATTCCCAAGTACCCCAACTCACTGCTGATCCTATTAAAGGAATGAGTCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CCACCAGACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGTCTCCCCACACTCTGTaGCCTCCTCTTCGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: PPDTVGLELANGSYSLTKSPHTL*PPLRWG
Trigger: ACCCCACCGAAGAGGAGGCCACAGAGTGTGGGGAGA...CTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTCTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GTTGTACATAACTTAGAGGTGAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAAGCTGCTGGCCCAGGTaGTCCGGAGCCACTTGGCAT +
Preference number: 4 (lower is better)
Translates to: VVHNLEVKCRSETGLDFGSCWPR*SGATWH
Trigger: ATGCCAAGTGGCTCCGGACCACCTGGGCCAGCAGCT...TCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTCACCTCTAAGTTATGTACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CATTCACCCTTCCCCTTTCACCTGGGTATAAGACAAATGAAATCGTGGGTGACCTACTGGCCCTCTCTCTaGCTGTCACTCTGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: HSPFPFHLGIRQMKSWVTYWPSL*LSLCSR
Trigger: GCGGCTGCAGAGTGACAGCCAGAGAGAGGGCCAGTA...GGTCACCCACGATTTCATTTGTCTTATACCCAGGTGAAAGGGGAAGGGTGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GCAGGACTCATTCCTTTAATAGGATCAGCAGTGAGTTGGGGTACTTGGGAATGGACTTGCTCTCCTGGCTaGCTTCCCGCACCACCTGCA +
Preference number: 4 (lower is better)
Translates to: AGLIPLIGSAVSWGTWEWTCSPG*LPAPPA
Trigger: TGCAGGTGGTGCGGGAAGCCAGCCAGGAGAGCAAGT...CCATTCCCAAGTACCCCAACTCACTGCTGATCCTATTAAAGGAATGAGTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CATTCACCCTTCCCCTTTCACCTGGGTATAAGACAAATGAAATCGTGGGTGACCAGCAACTTGCTCTCCTaGCTGGCTTCCCGCACCACC +
Preference number: 4 (lower is better)
Translates to: HSPFPFHLGIRQMKSWVTSNLLS*LASRTT
Trigger: GGTGGTGCGGGAAGCCAGCCAGGAGAGCAAGTTGCT...GGTCACCCACGATTTCATTTGTCTTATACCCAGGTGAAAGGGGAAGGGTGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CAAGCGAACCAGTCTCTGGAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTAGTGATCGGTCTTCTTaGCCGCATAGCGGAACCGGT +
Preference number: 4 (lower is better)
Translates to: QANQSLEQNQLSLELWSASDRSS*PHSGTG
Trigger: ACCGGTTCCGCTATGCGGCCAAGAAGACCGATCACT...AGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAGAGACTGGTTCGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp GAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGTGGAGTGCTTGGGGGTaGATCTCTTCGGATAGTCCA +
Preference number: 4 (lower is better)
Translates to: EQNQLSLELWSAWGWISSWSAWG*ISSDSP
Trigger: TGGACTATCCGAAGAGATCCACCCCCAAGCACTCCA...CGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp GGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGCCTTGAGTTGTaGAGTGCTTGGGGGTGGATC +
Preference number: 4 (lower is better)
Translates to: GWLGLIRVLRVGDPGKRCLSLEL*SAWGWI
Trigger: GATCCACCCCCAAGCACTCCACAACTCAAGGCTCAG...ACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp TACAGGAATGTCAATCATTTCGCAGGCATGCCTGGCCCCAAATGCATGACTGGATTAGGGCTGGAGAGGTaGTTCCGCAGACACCCAGTG +
Preference number: 4 (lower is better)
Translates to: YRNVNHFAGMPGPKCMTGLGLER*FRRHPV
Trigger: CACTGGGTGTCTGCGGAACCACCTCTCCAGCCCTAA...TCCAGTCATGCATTTGGGGCCAGGCATGCCTGCGAAATGATTGACATTCCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CCA 90 bp AGAAAGCAACCCTGTGGCCCTGTTGACCACCTAGTCCGGGAGAGTGTGGAGGTAGAGCAGCACTTTTGGTaGTTCATCTTGACCTTGTGC +
Preference number: 4 (lower is better)
Translates to: RKQPCGPVDHLVRESVEVEQHFW*FILTLC
Trigger: GCACAAGGTCAAGATGAACCACCAAAAGTGCTGCTC...TACCTCCACACTCTCCCGGACTAGGTGGTCAACAGGGCCACAGGGTTGCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CTACTGTGGGCCGAACTCAGGAGGAGCCCTAAAGCTAAGCCCTTGGGCTTGACATGGCCAAGTCAAAATTaGGCCCAGCGTCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LLWAELRRSPKAKPLGLTWPSQN*AQRLSF
Trigger: GAAAGAAAGACGCTGGGCCCAATTTTGACTTGGCCA...TGTCAAGCCCAAGGGCTTAGCTTTAGGGCTCCTCCTGAGTTCGGCCCACAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp AGAAAGCAACCCTGTGGCCCTGTTGACCACCTAGTCCGGGAGAGTGTGGAGGTAGATCAATACTGGCAGTaGGGTTTCCCAAAGGGAATG +
Preference number: 4 (lower is better)
Translates to: RKQPCGPVDHLVRESVEVDQYWQ*GFPKGM
Trigger: CATTCCCTTTGGGAAACCCCACTGCCAGTATTGATC...TACCTCCACACTCTCCCGGACTAGGTGGTCAACAGGGCCACAGGGTTGCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR CAA 72 bp TGGGCCGAACTCAGGAGGAGCCCTAAAGCTAAGCCCTaGGGCTTGACAGCTCTACTTTTCACCTCTAACTAC +
Preference number: 4 (lower is better)
Translates to: WAELRRSPKAKP*GLTALLFTSNY
Trigger: GTAGTTAGAGGTGAAAAGTAGAGCTGTCAAGCCCAAGGGCTTAGCTTTAGGGCTCCTCCTGAGTTCGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGGTAGGTAACCGGGAGAGGTaGTATAGCCAGCATCTTTGG +
Preference number: 4 (lower is better)
Translates to: GHHQSQLPVPHLASLLRVGNRER*YSQHLW
Trigger: CCAAAGATGCTGGCTATATCACCTCTCCCGGTTACC...TACCCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR TCA 90 bp CAAGCGAACCAGTCTCTGGAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTCTTCAGAGCCTGTCTTaGAGATCTCGTAGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: QANQSLEQNQLSLELWSALQSLS*RSRSAE
Trigger: CTCTGCGCTACGAGATCTTCAAGACAGGCTCTGAAG...AGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAGAGACTGGTTCGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp AGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGAGTTCACACAGAACTTCAGAGCCTGTCTTaGAGATCTCGTAGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: RVLRVGDPGKRCLRVHTELQSLS*RSRSAE
Trigger: CTCTGCGCTACGAGATCTTCAAGACAGGCTCTGAAG...TTCTGTGTGAACTCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp AGGACTTACCAGCTTTCTGAACACTGCGCATCATGGGAGGGTGAAGAGGAAAAGGAGGATCCCCGTCGATaGACGAAGTTCAGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: RTYQLSEHCASWEGEEEKEDPRR*TKFRGC
Trigger: ACACCCTCTGAACTTCGTTCATCGACGGGGATCCTC...CTTTTCCTCTTCACCCTCCCATGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp CCACCAGACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGACCGCCATGTCCGTGTaGAAGGTCAGGGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: PPDTVGLELANGSYSLTKTAMSV*KVRERI
Trigger: GATCCTCTCCCTGACCTTTCACACGGACATGGCGGT...CTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTCTGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTGTGTTGCGATGGCCGTaGGCATGGTTAAAAAGCGCA +
Preference number: 4 (lower is better)
Translates to: GWLGLIRVLRVGDPGKRCVLRWP*AWLKSA
Trigger: TGCGCTTTTTAACCATGCTCACGGCCATCGCAACAC...ACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp GGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGGTAGTGTTGCGATGGCCGTaGGCATGGTTAAAAAGCGCA +
Preference number: 4 (lower is better)
Translates to: GHHQSQLPVPHLASLLRVVLRWP*AWLKSA
Trigger: TGCGCTTTTTAACCATGCTCACGGCCATCGCAACAC...TACCCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR TCA 90 bp TGTTTAGATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTTCTGGGAGTCTGCAATaGGGCCTGAGAGCATCCCCA +
Preference number: 4 (lower is better)
Translates to: CLDGTSSVSTPCTTLSLPSGSLQ*GLRASP
Trigger: TGGGGATGCTCTCAGGCCTCATTGCAGACTCCCAGA...AGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCATCTAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR TCA 90 bp CAAAGACACCAGAAGACAAGGGGGTCTTGTTTGAGTGTGCTAGGGGAACCTTCTTGGGTCCTGGGGTCCTaGATGTATTCCCAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: QRHQKTRGSCLSVLGEPSWVLGS*MYSQSL
Trigger: CAAGGACTGGGAATACATTCAGGACCCCAGGACCCA...AGAAGGTTCCCCTAGCACACTCAAACAAGACCCCCTTGTCTTCTGGTGTCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR TCA 90 bp AGGACTTACCAGCTTTCTGAACACTGCGCATCATGGGAGGGTGAAGAGGAAAAGCGCATCATGGGAGGGTaGAGAGGAAAAGGGGCTAGT +
Preference number: 4 (lower is better)
Translates to: RTYQLSEHCASWEGEEEKRIMGG*RGKGAS
Trigger: ACTAGCCCCTTTTCCTCTTCACCCTCCCATGATGCG...CTTTTCCTCTTCACCCTCCCATGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGTGTTCCCACAGTGTTTaGCCAGGAGGTCTGCGGATT +
Preference number: 4 (lower is better)
Translates to: DGTSSVSTPCTTLSLPVECSHSV*PGGLRI
Trigger: AATCCGCAGACCTCCTGGGCAAACACTGTGGGAACA...CTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR GCA 90 bp AGAAAGCAACCCTGTGGCCCTGTTGACCACCTAGTCCGGGAGAGTGTGGAGGTATGCCCAGAGGAACATTaGACTGAAAGTTCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: RKQPCGPVDHLVRESVEVCPEEH*TESSLV
Trigger: CACTAGAGAACTTTCAGTGCAATGTTCCTCTGGGCA...TACCTCCACACTCTCCCGGACTAGGTGGTCAACAGGGCCACAGGGTTGCTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp CAAAGACACCAGAAGACAAGGGGGTCTTGTTTGAGTGTGCTAGGGGAACCTTCTAATCGCTCCCTGTGTTaGGATGGCCGTGAGCATGGT +
Preference number: 4 (lower is better)
Translates to: QRHQKTRGSCLSVLGEPSNRSLC*DGREHG
Trigger: ACCATGCTCACGGCCATCGCAACACAGGGAGCGATT...AGAAGGTTCCCCTAGCACACTCAAACAAGACCCCCTTGTCTTCTGGTGTCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR GCA 90 bp TCAAGTTCCCGTGATCTGGCTCAGCCAGTGAATGGTCGAATACCTCTAACTGCAAATCGCTCCCTGTGTTaGGATGGCCGTGAGCATGGT +
Preference number: 4 (lower is better)
Translates to: SSSRDLAQPVNGRIPLTANRSLC*DGREHG
Trigger: ACCATGCTCACGGCCATCGCAACACAGGGAGCGATT...TGCAGTTAGAGGTATTCGACCATTCACTGGCTGAGCCAGATCACGGGAACTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp CTCTGTTCTCCTTCCCGTCCAGTGGTGACCAGTTACAATAACTCGCTGATGGGGTTGTGGTTTTTGCCATaGCGGTACACCATCCAGTCC +
Preference number: 4 (lower is better)
Translates to: LCSPSRPVVTSYNNSLMGLWFLP*RYTIQS
Trigger: GGACTGGATGGTGTACCGGCATGGCAAAAACCACAA...CCCCATCAGCGAGTTATTGTAACTGGTCACCACTGGACGGGAAGGAGAACAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp CAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCAATACCTTGTGGTTTTTaGCATGCCGGTACACCATCC +
Preference number: 4 (lower is better)
Translates to: QLSLELWSAWGWISSDSPIPCGF*HAGTPS
Trigger: GGATGGTGTACCGGCATGGCAAAAACCACAAGGTAT...TGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp GTGCCGAGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACATACCTTGTGGTTTTTaGCATGCCGGTACACCATCC +
Preference number: 4 (lower is better)
Translates to: VPSAKISCDTRTLGQSHNIPCGF*HAGTPS
Trigger: GGATGGTGTACCGGCATGGCAAAAACCACAAGGTAT...GTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACTCGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp CTCTATGGGGCACCTACAGGAATGTCAATCATTTCGCAGGCATGCCTGGCCCCATGTATTCCCAGTCCTTaGCGTTTAGGCTGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: LYGAPTGMSIISQACLAPCIPSP*RLGCRR
Trigger: TCTCCTACAGCCTAAACGGCAAGGACTGGGAATACA...TGGGGCCAGGCATGCCTGCGAAATGATTGACATTCCTGTAGGTGCCCCATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR GCA 90 bp CAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCATGTATTCCCAGTCCTTaGCGTTTAGGCTGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: QLSLELWSAWGWISSDSPCIPSP*RLGCRR
Trigger: TCTCCTACAGCCTAAACGGCAAGGACTGGGAATACA...TGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp CCAGAAACCAAAATGAACCCAAGGAGGATGGTTGGGATTGATAAGAGTGCTCAGTTCGGCCCTCAGCAGTaGGAGCCACGGTCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: PETKMNPRRMVGIDKSAQFGPQQ*EPRSCS
Trigger: AGAGCAAGACCGTGGCTCGCACTGCTGAGGGCCGAA...CTGAGCACTCTTATCAATCCCAACCATCCTCCTTGGGTTCATTTTGGTTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp TACCCCAGGAGAAGTAACATAAGAGTTAAAGGGGCCCTCTCTGAACACTCACCCTTTGGGTGCTGTTCTTaGTTCGGCCCTCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: YPRRSNIRVKGALSEHSPFGCCS*FGPQQC
Trigger: GCACTGCTGAGGGCCGAAGCAAGAACAGCACCCAAA...GGGTGAGTGTTCAGAGAGGGCCCCTTTAACTCTTATGTTACTTCTCCTGGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp GAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGCTCGTTTGTTTTGGGTaGTGTTCTTGCTTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: EQNQLSLELWSAWGWISSLVCFG*CSCFGP
Trigger: AGGGCCGAAGCAAGAACAGCACCCAAAACAAACGAG...CGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp TGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGCAAAGGCAGAGGTTaGAGGATGGGGAGTGACAGA +
Preference number: 4 (lower is better)
Translates to: WLGLIRVLRVGDPGKRCLSKGRG*RMGSDR
Trigger: TCTGTCACTCCCCATCCTGCAACCTCTGCCTTTGCT...CAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR GCA 90 bp TGTTTTATTGGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCATGTTGCTGCTGCTGGTaGGGCGGCGGTGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: CFIGFQELDDDCLDGTSSCCCCW*GGGGGW
Trigger: CCAGCCGCCACCGCCGCCGCACCAGCAGCAGCAACA...TGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCCAATAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR GCA 90 bp AGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTCTGAACACTGCGCATCAAGTTCTCCAGTGTGGTaGAGCTTCGGGAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: RLLLEIPRTYQLSEHCASSSPVW*SFGSSG
Trigger: GCCTGAGCTCCCGAAGCTGCACCACACTGGAGAACT...TGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GTTTTGTCCCAGCAGAGAACACAGCCCCGTTCCTGCAATGACTTAGCCACCGCGGTCATTCTCCTCTTCTaGCTCTTTGAGTTGCTCACA +
Preference number: 4 (lower is better)
Translates to: VLSQQRTQPRSCNDLATAVILLF*LFELLT
Trigger: TGTGAGCAACTCAAAGAGGCAGAAGAGGAGAATGAC...CGCGGTGGCTAAGTCATTGCAGGAACGGGGCTGTGTTCTCTGCTGGGACAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCTCAACTCCCTCCGCACGGTGGGTCTaGTTGGCCTCTCACTTGGTG +
Preference number: 4 (lower is better)
Translates to: FQELDDDCLDGTSSVSTPSARWV*LASHLV
Trigger: CACCAAGTGAGAGGCCAACCAGACCCACCGTGCGGA...GGGAGTTGAGACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CCA 90 bp AGAAAGCAACCCTGTGGCCCTGTTGACCACCTAGTCCGGGAGAGTGTGGAGGTATATAGCCAGCATCTTTaGAATTCAAACGACCTCCGC +
Preference number: 4 (lower is better)
Translates to: RKQPCGPVDHLVRESVEVYSQHL*NSNDLR
Trigger: GCGGAGGTCGTTTGAATTCCAAAGATGCTGGCTATA...TACCTCCACACTCTCCCGGACTAGGTGGTCAACAGGGCCACAGGGTTGCTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp AGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCAAGATGCAGCATTACAGGGGGCCAACATGTaGAATGCCATCCCAGATGTC +
Preference number: 4 (lower is better)
Translates to: SCGVLGGGSLRIVQDAALQGANM*NAIPDV
Trigger: GACATCTGGGATGGCATTCCACATGTTGGCCCCCTG...TAATGCTGCATCTTGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp AGGACTTACCAGCTTTCTGAACACTGCGCATCATGGGAGGGTGAAGAGGAAAAGCAGGGGGCCAACATGTaGAATGCCATCCCAGATGTC +
Preference number: 4 (lower is better)
Translates to: RTYQLSEHCASWEGEEEKQGANM*NAIPDV
Trigger: GACATCTGGGATGGCATTCCACATGTTGGCCCCCTG...CTTTTCCTCTTCACCCTCCCATGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTCTTGCTTCGGCCCAGAGAAGCCATCCTTaGCCACCGCCATGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: ATCLQSFSFVLGAVLASAQRSHP*PPPCPC
Trigger: ACACGGACATGGCGGTGGCCAAGGATGGCTTCTCTG...GGCCGAAGCAAGAACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp CTCAAGGCTGAAGCAGCATGGTTAAGCATTCTTGTCCACAGTACTTGCGGACTTCAGAGAAGCCATCCTTaGCCACCGCCATGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: LKAEAAWLSILVHSTCGLQRSHP*PPPCPC
Trigger: ACACGGACATGGCGGTGGCCAAGGATGGCTTCTCTG...AAGTCCGCAAGTACTGTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTTGAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp AGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCAAGATGCAGCATTAGAAGAGGCGGAGATCTaGGAGTCTGCAATGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SCGVLGGGSLRIVQDAALEEAEI*ESAMRP
Trigger: AGGCCTCATTGCAGACTCCCAGATCTCCGCCTCTTC...TAATGCTGCATCTTGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp TACCCCAGGAGAAGTAACATAAGAGTTAAAGGGGCCCTCTCTGAACACTCACCCGAAGAGGCGGAGATCTaGGAGTCTGCAATGAGGCCT +
Preference number: 4 (lower is better)
Translates to: YPRRSNIRVKGALSEHSPEEAEI*ESAMRP
Trigger: AGGCCTCATTGCAGACTCCCAGATCTCCGCCTCTTC...GGGTGAGTGTTCAGAGAGGGCCCCTTTAACTCTTATGTTACTTCTCCTGGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp AGGACTTACCAGCTTTCTGAACACTGCGCATCATGGGAGGGTGAAGAGGAAAAGGAAGAGGCGGAGATCTaGGAGTCTGCAATGAGGCCT +
Preference number: 4 (lower is better)
Translates to: RTYQLSEHCASWEGEEEKEEAEI*ESAMRP
Trigger: AGGCCTCATTGCAGACTCCCAGATCTCCGCCTCTTC...CTTTTCCTCTTCACCCTCCCATGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CTCTATGGGGCACCTACAGGAATGTCAATCATTTCGCAGGCATGCCTGGCCCCACACCTTTCACTGTCTTaGGTGTTCCCAGATCTACCT +
Preference number: 4 (lower is better)
Translates to: LYGAPTGMSIISQACLAPHLSLS*VFPDLP
Trigger: AGGTAGATCTGGGAACACCCAAGACAGTGAAAGGTG...TGGGGCCAGGCATGCCTGCGAAATGATTGACATTCCTGTAGGTGCCCCATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CCA 90 bp AGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTCTGAACACTGCGCATCACCTCCGCGGGCTCCCTaGATGATGACACCTTTCACT +
Preference number: 4 (lower is better)
Translates to: RLLLEIPRTYQLSEHCASPPRAP*MMTPFT
Trigger: AGTGAAAGGTGTCATCATCCAGGGAGCCCGCGGAGG...TGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GTGCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTAGCTGCTGGCCCAGGTaGTCCGGAGCCACTTGGCAT +
Preference number: 4 (lower is better)
Translates to: VQNRGNMFAVFLVCFGCCSCWPR*SGATWH
Trigger: ATGCCAAGTGGCTCCGGACCACCTGGGCCAGCAGCT...ACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp AAACAAGCGAACCAGTCTCTGGAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTATGAGCCGGGCATACTaGCCCTCTCTCTGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: KQANQSLEQNQLSLELWSMSRAY*PSLWLS
Trigger: TGACAGCCAGAGAGAGGGCCAGTATGCCCGGCTCAT...ACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAGAGACTGGTTCGCTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp AAAATGAACCCAAGGAGGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGAATGAGCCGGGCATACTaGCCCTCTCTCTGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: KMNPRRMVGIDKSAQGWGMSRAY*PSLWLS
Trigger: TGACAGCCAGAGAGAGGGCCAGTATGCCCGGCTCAT...TCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCCTCCTTGGGTTCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp CTCAAGGCTGAAGCAGCATGGTTAAGCATTCTTGTCCACAGTACTTGCGGACTTATGAGCCGGGCATACTaGCCCTCTCTCTGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: LKAEAAWLSILVHSTCGLMSRAY*PSLWLS
Trigger: TGACAGCCAGAGAGAGGGCCAGTATGCCCGGCTCAT...AAGTCCGCAAGTACTGTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp AAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTTCCACTCGCCGCCCTaGTCCTCACGGATGACCCAC +
Preference number: 4 (lower is better)
Translates to: KLTFFCRLLLEIPRTYQLFHSPP*SSRMTH
Trigger: GTGGGTCATCCGTGAGGACCAGGGCGGCGAGTGGAA...AAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GCCACACCTCTATGGGGCACCTACAGGAATGTCAATCATTTCGCAGGCATGCCTCATGCAGTTCTCCAGTaGGACATCAGTGCTTATCCG +
Preference number: 4 (lower is better)
Translates to: ATPLWGTYRNVNHFAGMPHAVLQ*DISAYP
Trigger: CGGATAAGCACTGATGTCCCACTGGAGAACTGCATG...AGGCATGCCTGCGAAATGATTGACATTCCTGTAGGTGCCCCATAGAGGTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CCA 90 bp TTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGAAGTGATCGGTCTTCTTaGCCGCATAGCGGAACCGGT +
Preference number: 4 (lower is better)
Translates to: LGLIRVLRVGDPGKRCLRSDRSS*PHSGTG
Trigger: ACCGGTTCCGCTATGCGGCCAAGAAGACCGATCACT...TCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp CAAGCGAACCAGTCTCTGGAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTTTCTCAGAAGGAACCTaGAGGCTTTTGGCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: QANQSLEQNQLSLELWSAFSEGT*RLLAQA
Trigger: TGCCTGGGCCAAAAGCCTCCAGGTTCCTTCTGAGAA...AGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAGAGACTGGTTCGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CCA 90 bp TTTCCAGCACACAGGCAATCCTTAGGCGTTAATATGAAATCAAGATTTGGATCTCGGCTGAGGATGTGCTaGGGGCCGGCTGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: FPAHRQSLGVNMKSRFGSRLRMC*GPAAGW
Trigger: CCAGCCTGCAGCCGGCCCCCAGCACATCCTCAGCCG...AGATCCAAATCTTGATTTCATATTAACGCCTAAGGATTGCCTGTGTGCTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GAGAAAGCGGAGAATAATGATCACTGCTCCACTTCTATTCTGGAAAAGTCATTCCCTCTCCGAGTTCGCTaGCGCCCGCCCTCACCTCCA +
Preference number: 4 (lower is better)
Translates to: EKAENNDHCSTSILEKSFPLRVR*RPPSPP
Trigger: TGGAGGTGAGGGCGGGCGCCAGCGAACTCGGAGAGG...GAATGACTTTTCCAGAATAGAAGTGGAGCAGTGATCATTATTCTCCGCTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAGAACTGTAAAATGGCTCACTAACCAAGACTTGCCTTaGGCATCACACGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: EVQVRNRARLWRTVKWLTNQDLP*ASHGPQ
Trigger: CTGGGGGCCGTGTGATGCCCAAGGCAAGTCTTGGTT...AGTGAGCCATTTTACAGTTCTCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp AGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACACCACCCCTCCTGAGTCCTGGTaGCTTGTCTTCACCTCTATT +
Preference number: 4 (lower is better)
Translates to: SAKISCDTRTLGQSHNTTPPESW*LVFTSI
Trigger: AATAGAGGTGAAGACAAGCCACCAGGACTCAGGAGG...GGTGGTGTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CTCTGTTCTCCTTCCCGTCCAGTGGTGACCAGTTACAATAACTCGCTGATGGGGCCATTTTGGAGAAGGTaGCTCTTTCCAGAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LCSPSRPVVTSYNNSLMGPFWRR*LFPELG
Trigger: ACCCAGCTCTGGAAAGAGCCACCTTCTCCAAAATGG...CCCCATCAGCGAGTTATTGTAACTGGTCACCACTGGACGGGAAGGAGAACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GTTTTGTCCCAGCAGAGAACACAGCCCCGTTCCTGCAATGACTTAGCCACCGCGAAGACAATCAGAGGATaGGATAAGCTGGACGGCTTT +
Preference number: 4 (lower is better)
Translates to: VLSQQRTQPRSCNDLATAKTIRG*DKLDGF
Trigger: AAAGCCGTCCAGCTTATCCCATCCTCTGATTGTCTT...CGCGGTGGCTAAGTCATTGCAGGAACGGGGCTGTGTTCTCTGCTGGGACAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp AGGACTTACCAGCTTTCTGAACACTGCGCATCATGGGAGGGTGAAGAGGAAAAGGTGAGTTGGGGTACTTaGGAATGGAGCCATCGGGGT +
Preference number: 4 (lower is better)
Translates to: RTYQLSEHCASWEGEEEKVSWGT*EWSHRG
Trigger: ACCCCGATGGCTCCATTCCCAAGTACCCCAACTCAC...CTTTTCCTCTTCACCCTCCCATGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CTCTGTTCTCCTTCCCGTCCAGTGGTGACCAGTTACAATAACTCGCTGATGGGGCAGCATCAGGACCCCTaGAGTGGCTTTCAAACTTAC +
Preference number: 4 (lower is better)
Translates to: LCSPSRPVVTSYNNSLMGQHQDP*SGFQTY
Trigger: GTAAGTTTGAAAGCCACTCCAGGGGTCCTGATGCTG...CCCCATCAGCGAGTTATTGTAACTGGTCACCACTGGACGGGAAGGAGAACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp AGGACTTACCAGCTTTCTGAACACTGCGCATCATGGGAGGGTGAAGAGGAAAAGCTTCAGAGCCTGTCTTaGAGATCTCGTAGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: RTYQLSEHCASWEGEEEKLQSLS*RSRSAE
Trigger: CTCTGCGCTACGAGATCTTCAAGACAGGCTCTGAAG...CTTTTCCTCTTCACCCTCCCATGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp ACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGGTAACCTTCAGAGCCTGTCTTaGAGATCTCGTAGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: TSSVSTPCTTLSLPVEGNLQSLS*RSRSAE
Trigger: CTCTGCGCTACGAGATCTTCAAGACAGGCTCTGAAG...GTTACCCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR TCA 90 bp AAACAAGCGAACCAGTCTCTGGAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGAGGATCCCCGTCGATaGACGAAGTTCAGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: KQANQSLEQNQLSLELWSEDPRR*TKFRGC
Trigger: ACACCCTCTGAACTTCGTTCATCGACGGGGATCCTC...ACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAGAGACTGGTTCGCTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp TGTTTAGATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGAGGATCCCCGTCGATaGACGAAGTTCAGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: CLDGTSSVSTPCTTLSLPEDPRR*TKFRGC
Trigger: ACACCCTCTGAACTTCGTTCATCGACGGGGATCCTC...AGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCATCTAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR TCA 90 bp CAAAGACACCAGAAGACAAGGGGGTCTTGTTTGAGTGTGCTAGGGGAACCTTCTGTGTTGCGATGGCCGTaGGCATGGTTAAAAAGCGCA +
Preference number: 4 (lower is better)
Translates to: QRHQKTRGSCLSVLGEPSVLRWP*AWLKSA
Trigger: TGCGCTTTTTAACCATGCTCACGGCCATCGCAACAC...AGAAGGTTCCCCTAGCACACTCAAACAAGACCCCCTTGTCTTCTGGTGTCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR TCA 90 bp GTGCCGAGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACCCAGCTTGTAGGATTTaGCATAGTAGCCATTCTGTG +
Preference number: 4 (lower is better)
Translates to: VPSAKISCDTRTLGQSHNPACRI*HSSHSV
Trigger: CACAGAATGGCTACTATGTCAAATCCTACAAGCTGG...GTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACTCGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp CATTCACCCTTCCCCTTTCACCTGGGTATAAGACAAATGAAATCGTGGGTGACCCCTGAGTGCCAGGTCTaGGGGCGGATTCTAACAAAC +
Preference number: 4 (lower is better)
Translates to: HSPFPFHLGIRQMKSWVTPECQV*GRILTN
Trigger: GTTTGTTAGAATCCGCCCTCAGACCTGGCACTCAGG...GGTCACCCACGATTTCATTTGTCTTATACCCAGGTGAAAGGGGAAGGGTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp CTCAAGGCTGAAGCAGCATGGTTAAGCATTCTTGTCCACAGTACTTGCGGACTTGTCTGCAATGAGGCCTaGGAGCATCCCCAGCATGTT +
Preference number: 4 (lower is better)
Translates to: LKAEAAWLSILVHSTCGLVCNEA*EHPQHV
Trigger: AACATGCTGGGGATGCTCTCAGGCCTCATTGCAGAC...AAGTCCGCAAGTACTGTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp AAAATGAACCCAAGGAGGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATGGGTCCTGGGGTCCTaGATGTATTCCCAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: KMNPRRMVGIDKSAQGWGWVLGS*MYSQSL
Trigger: CAAGGACTGGGAATACATTCAGGACCCCAGGACCCA...TCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCCTCCTTGGGTTCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp CCACCAGACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGTGGGTCCTGGGGTCCTaGATGTATTCCCAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: PPDTVGLELANGSYSLTKWVLGS*MYSQSL
Trigger: CAAGGACTGGGAATACATTCAGGACCCCAGGACCCA...CTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTCTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp TTTCCAGCACACAGGCAATCCTTAGGCGTTAATATGAAATCAAGATTTGGATCTGAGTGTCTGTGCGGCTaGGGATGTGCTGGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: FPAHRQSLGVNMKSRFGSECLCG*GCAGGR
Trigger: CCGGCCCCCAGCACATCCTCAGCCGCACAGACACTC...AGATCCAAATCTTGATTTCATATTAACGCCTAAGGATTGCCTGTGTGCTGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp TGTTTTATTGGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGGGATCGCCTGGGAGTaGGCGAGCCCCTCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: CFIGFQELDDDCLDGTSSGIAWE*ASPSPS
Trigger: ACTCGGAGAGGGGCTCGCTCACTCCCAGGCGATCCC...TGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCCAATAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR TCA 90 bp GACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGCACTTTCTCAGAGGCGTAAACTaGCACACATCCCGCGGCACC +
Preference number: 4 (lower is better)
Translates to: DTVGLELANGSYSLTKHFLRGVN*HTSRGT
Trigger: GGTGCCGCGGGATGTGTGTCAGTTTACGCCTCTGAG...AAAGTGCTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp AGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTCTGAACACTGCGCATCATCAGCGTTTCCCTCCTaGGTCCTGGTGGCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: RLLLEIPRTYQLSEHCASSAFPS*VLVACL
Trigger: AAGACAAGCCACCAGGACTCAGGAGGGAAACGCTGA...TGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp TGTTTAGATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTTCAGCGTTTCCCTCCTaGGTCCTGGTGGCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: CLDGTSSVSTPCTTLSLPSAFPS*VLVACL
Trigger: AAGACAAGCCACCAGGACTCAGGAGGGAAACGCTGA...AGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCATCTAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR TCA 90 bp GTGCCGAGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACATTTTCCCCTGCCTCTaGGAATATCACACAATGCTG +
Preference number: 4 (lower is better)
Translates to: VPSAKISCDTRTLGQSHNIFPCL*EYHTML
Trigger: CAGCATTGTGTGATATTCTCAGAGGCAGGGGAAAAT...GTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACTCGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp AGAAAGCAACCCTGTGGCCCTGTTGACCACCTAGTCCGGGAGAGTGTGGAGGTAGTTACAATAACTCGCTaGTGGGGAGAACATACCAAT +
Preference number: 4 (lower is better)
Translates to: RKQPCGPVDHLVRESVEVVTITR*WGEHTN
Trigger: ATTGGTATGTTCTCCCCATCAGCGAGTTATTGTAAC...TACCTCCACACTCTCCCGGACTAGGTGGTCAACAGGGCCACAGGGTTGCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp AGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACACCACCCCACTGAGTCCCACATaGCCATTCACATACACAGTA +
Preference number: 4 (lower is better)
Translates to: SAKISCDTRTLGQSHNTTPLSPT*PFTYTV
Trigger: TACTGTGTATGTGAATGGTCATGTGGGACTCAGTGG...GGTGGTGTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp CTCAAGGCTGAAGCAGCATGGTTAAGCATTCTTGTCCACAGTACTTGCGGACTTCTACCACTGTGCCAATaGGTGCCGAGTGCCAAGATC +
Preference number: 4 (lower is better)
Translates to: LKAEAAWLSILVHSTCGLLPLCQ*VPSAKI
Trigger: GATCTTGGCACTCGGCACTCATTGGCACAGTGGTAG...AAGTCCGCAAGTACTGTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTTGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp CTCAAGGCTGAAGCAGCATGGTTAAGCATTCTTGTCCACAGTACTTGCGGACTTTTTGCCCAGGAGGTCTaGGGATTCACTGTCCCCATC +
Preference number: 4 (lower is better)
Translates to: LKAEAAWLSILVHSTCGLFAQEV*GFTVPI
Trigger: GATGGGGACAGTGAATCCGCAGACCTCCTGGGCAAA...AAGTCCGCAAGTACTGTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp TGTTTAGATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTTTTGCCCAGGAGGTCTaGGGATTCACTGTCCCCATC +
Preference number: 4 (lower is better)
Translates to: CLDGTSSVSTPCTTLSLPFAQEV*GFTVPI
Trigger: GATGGGGACAGTGAATCCGCAGACCTCCTGGGCAAA...AGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCATCTAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR GCA 90 bp TCAAGTTCCCGTGATCTGGCTCAGCCAGTGAATGGTCGAATACCTCTAACTGCATGTTCCCACAGTGTTTaGCCAGGAGGTCTGCGGATT +
Preference number: 4 (lower is better)
Translates to: SSSRDLAQPVNGRIPLTACSHSV*PGGLRI
Trigger: AATCCGCAGACCTCCTGGGCAAACACTGTGGGAACA...TGCAGTTAGAGGTATTCGACCATTCACTGGCTGAGCCAGATCACGGGAACTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTCTTGCTTCGGCCGGCCAACATGTGGAATaGCATCCCAGATGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: ATCLQSFSFVLGAVLASAGQHVE*HPRCPA
Trigger: GGCTGGACATCTGGGATGGCATTCCACATGTTGGCC...GGCCGAAGCAAGAACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp GCAGGACTCATTCCTTTAATAGGATCAGCAGTGAGTTGGGGTACTTGGGAATGGGGCCAACATGTGGAATaGCATCCCAGATGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: AGLIPLIGSAVSWGTWEWGQHVE*HPRCPA
Trigger: GGCTGGACATCTGGGATGGCATTCCACATGTTGGCC...CCATTCCCAAGTACCCCAACTCACTGCTGATCCTATTAAAGGAATGAGTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGTTGTGGTTTTTGCCATaGCGGTACACCATCCAGTCC +
Preference number: 4 (lower is better)
Translates to: DGTSSVSTPCTTLSLPVELWFLP*RYTIQS
Trigger: GGACTGGATGGTGTACCGGCATGGCAAAAACCACAA...CTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR GCA 90 bp GGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGGTAGAACTTGCGCACAAATaGTCTGGCTTCCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: GHHQSQLPVPHLASLLRVELAHK*SGFHSS
Trigger: ACTGCTGTGGAAGCCAGAGCATTTGTGCGCAAGTTC...TACCCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR GCA 90 bp TTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGATACCCGCACATACTGTaGCGGAATGGGGTCAAACCT +
Preference number: 4 (lower is better)
Translates to: LGLIRVLRVGDPGKRCLRYPHIL*RNGVKP
Trigger: AGGTTTGACCCCATTCCGGCACAGTATGTGCGGGTA...TCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp AGAAGTAACATAAGAGTTAAAGGGGCCCTCTCTGAACACTCACCCCTCGCCCAACTCTGGCTGTCACTCTaGAGCCGCAAGAAATTCCTG +
Preference number: 4 (lower is better)
Translates to: RSNIRVKGALSEHSPLAQLWLSL*SRKKFL
Trigger: CAGGAATTTCTTGCGGCTGCAGAGTGACAGCCAGAG...TTGGGCGAGGGGTGAGTGTTCAGAGAGGGCCCCTTTAACTCTTATGTTACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp GACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGCACTTTGGTACTGGAACTCCATaGACACCGGGCTTCGGGGCA +
Preference number: 4 (lower is better)
Translates to: DTVGLELANGSYSLTKHFGTGTP*TPGFGA
Trigger: TGCCCCGAAGCCCGGTGTGCATGGAGTTCCAGTACC...AAAGTGCTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp CAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCACCAGTGGGACATCAGTaGTTATCCGAATGTCATCAA +
Preference number: 4 (lower is better)
Translates to: QLSLELWSAWGWISSDSPPVGHQ*LSECHQ
Trigger: TTGATGACATTCGGATAAGCACTGATGTCCCACTGG...TGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp GCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTCTTGCTTCGGCCTTTGGGTGCTGTTCTTaGTTCGGCCCTCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: ATCLQSFSFVLGAVLASAFGCCS*FGPQQC
Trigger: GCACTGCTGAGGGCCGAAGCAAGAACAGCACCCAAA...GGCCGAAGCAAGAACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp AGGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCCCGCTCCCCTTGTTaGTTAGAGAAGACACATGAG +
Preference number: 4 (lower is better)
Translates to: RMVGIDKSAQGWGSGKEMSRSPC*LEKTHE
Trigger: CTCATGTGTCTTCTCTAAGCAACAAGGGGAGCGGGA...CATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR GCA 90 bp AGAAGTAACATAAGAGTTAAAGGGGCCCTCTCTGAACACTCACCCCTCGCCCAAATGCCTGGCCCCAAATaGATGACTGGATGTGGACAG +
Preference number: 4 (lower is better)
Translates to: RSNIRVKGALSEHSPLAQMPGPK*MTGCGQ
Trigger: CTGTCCACATCCAGTCATGCATTTGGGGCCAGGCAT...TTGGGCGAGGGGTGAGTGTTCAGAGAGGGCCCCTTTAACTCTTATGTTACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR GCA 90 bp TGTTTAGATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTTCTGAGGAAGGAAGCTaGTGCTGCTGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CLDGTSSVSTPCTTLSLPSEEGS*CCCCCC
Trigger: GCAGCAGCAACAGCAGCAGCAGCTTCCTTCCTCAGA...AGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCATCTAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR GCA 90 bp CTACTGTGGGCCGAACTCAGGAGGAGCCCTAAAGCTAAGCCCTTGGGCTTGACATTGCAGAAGAAGAATTaGTCCAGTCCACCTCGTATT +
Preference number: 4 (lower is better)
Translates to: LLWAELRRSPKAKPLGLTLQKKN*SSPPRI
Trigger: AATACGAGGTGGACTGGAGCAATTCTTCTTCTGCAA...TGTCAAGCCCAAGGGCTTAGCTTTAGGGCTCCTCCTGAGTTCGGCCCACAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp CTCAAGGCTGAAGCAGCATGGTTAAGCATTCTTGTCCACAGTACTTGCGGACTTGGTAATCATCCCCTGTaGGGCTGCATCTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LKAEAAWLSILVHSTCGLGNHPL*GCISLP
Trigger: AGGAAGGGAGATGCAGCCGCACAGGGGATGATTACC...AAGTCCGCAAGTACTGTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp CATTCACCCTTCCCCTTTCACCTGGGTATAAGACAAATGAAATCGTGGGTGACCGGTAATCATCCCCTGTaGGGCTGCATCTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: HSPFPFHLGIRQMKSWVTGNHPL*GCISLP
Trigger: AGGAAGGGAGATGCAGCCGCACAGGGGATGATTACC...GGTCACCCACGATTTCATTTGTCTTATACCCAGGTGAAAGGGGAAGGGTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GTGCCGAGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACCTTGTCCACAGTACTTaGGGACTTCTGGTTAGAATC +
Preference number: 4 (lower is better)
Translates to: VPSAKISCDTRTLGQSHNLVHST*GLLVRI
Trigger: GATTCTAACCAGAAGTCCGCAAGTACTGTGGACAAG...GTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACTCGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp AGGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGGGACAATCTTCTGGTTaGGTTCGGGGGCGTAAACAA +
Preference number: 4 (lower is better)
Translates to: RMVGIDKSAQGWGSGKEMGQSSG*VRGRKQ
Trigger: TTGTTTACGCCCCCGAACCCAACCAGAAGATTGTCC...CATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp TGTTTAGATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTCAGGGGGCCAACATGTaGAATGCCATCCCAGATGTC +
Preference number: 4 (lower is better)
Translates to: CLDGTSSVSTPCTTLSLPQGANM*NAIPDV
Trigger: GACATCTGGGATGGCATTCCACATGTTGGCCCCCTG...AGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCATCTAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CCA 90 bp GAGTGGCTTTCAAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGACAGAGAAGCCATCCTTaGCCACCGCCATGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: EWLSNLPSSAGYFWKSLGQRSHP*PPPCPC
Trigger: ACACGGACATGGCGGTGGCCAAGGATGGCTTCTCTG...TCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CAGCCGCTCTCTCACACACCCACACACAGAGAGCTATTCACACACACACATGTCTGTTGGAATCCAAGTTaGGGGTCCAGCCATTGTCAT +
Preference number: 4 (lower is better)
Translates to: QPLSHTPTHRELFTHTHVCWNPS*GSSHCH
Trigger: ATGACAATGGCTGGACCCCCAACTTGGATTCCAACA...GACATGTGTGTGTGTGAATAGCTCTCTGTGTGTGGGTGTGTGAGAGAGCGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp AGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGAGTTCACACAGAAGGAGATACTCCTTGTTaGAATCCAAGTTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: RVLRVGDPGKRCLRVHTEGDTPC*NPSWGS
Trigger: GGACCCCCAACTTGGATTCCAACAAGGAGTATCTCC...TTCTGTGTGAACTCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp GATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGAGTTCACACAAGCGCAGGTCCACCTaGAGATACTCCTTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: DKSAQGWGSGKEMSESSHKRRST*RYSLLE
Trigger: TTCCAACAAGGAGTATCTCCAGGTGGACCTGCGCTT...GTGTGAACTCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp GATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGAAGCGCAGGTCCACCTaGAGATACTCCTTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: DGTSSVSTPCTTLSLPVEKRRST*RYSLLE
Trigger: TTCCAACAAGGAGTATCTCCAGGTGGACCTGCGCTT...CTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CCA 90 bp GTTTTGTCCCAGCAGAGAACACAGCCCCGTTCCTGCAATGACTTAGCCACCGCGCAGTTGCATCGTTGTTaGCTTGAAATACCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: VLSQQRTQPRSCNDLATAQLHRC*LEIPCG
Trigger: ACCACAAGGTATTTCAAGCCAACAACGATGCAACTG...CGCGGTGGCTAAGTCATTGCAGGAACGGGGCTGTGTTCTCTGCTGGGACAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAGAACTGTAAAATGGCTCACTGTCAGCAGTGGAGCGTaGAGCTTGTTCAGAACCACC +
Preference number: 4 (lower is better)
Translates to: EVQVRNRARLWRTVKWLTVSSGA*SLFRTT
Trigger: GGTGGTTCTGAACAAGCTCCACGCTCCACTGCTGAC...AGTGAGCCATTTTACAGTTCTCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp AGGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGAAACCTTGTCAGCAGTaGAGCGTGGAGCTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: RMVGIDKSAQGWGSGKEMKPCQQ*SVELVQ
Trigger: CTGAACAAGCTCCACGCTCCACTGCTGACAAGGTTT...CATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp CCACCAGACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGGAAGAGGCGGAGATCTaGGAGTCTGCAATGAGGCCT +
Preference number: 4 (lower is better)
Translates to: PPDTVGLELANGSYSLTKEEAEI*ESAMRP
Trigger: AGGCCTCATTGCAGACTCCCAGATCTCCGCCTCTTC...CTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTCTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp AGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTCTGAACACTGCGCATCACTCCAGAGGTATTCCTaGGTGGAAGAGGCGGAGATC +
Preference number: 4 (lower is better)
Translates to: RLLLEIPRTYQLSEHCASLQRYS*VEEAEI
Trigger: GATCTCCGCCTCTTCCACCCAGGAATACCTCTGGAG...TGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCTCAACTCCCCCTCCGCGGGCTCCCTaGATGATGACACCTTTCACT +
Preference number: 4 (lower is better)
Translates to: FQELDDDCLDGTSSVSTPPPRAP*MMTPFT
Trigger: AGTGAAAGGTGTCATCATCCAGGGAGCCCGCGGAGG...GGGAGTTGAGACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CCA 90 bp GCAGGACTCATTCCTTTAATAGGATCAGCAGTGAGTTGGGGTACTTGGGAATGGTTGGCTGCTGGGTCCTaGGGTCCTGAATGTATTCCC +
Preference number: 4 (lower is better)
Translates to: AGLIPLIGSAVSWGTWEWLAAGS*GPECIP
Trigger: GGGAATACATTCAGGACCCCAGGACCCAGCAGCCAA...CCATTCCCAAGTACCCCAACTCACTGCTGATCCTATTAAAGGAATGAGTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CATTCACCCTTCCCCTTTCACCTGGGTATAAGACAAATGAAATCGTGGGTGACCTTGGCTGCTGGGTCCTaGGGTCCTGAATGTATTCCC +
Preference number: 4 (lower is better)
Translates to: HSPFPFHLGIRQMKSWVTLAAGS*GPECIP
Trigger: GGGAATACATTCAGGACCCCAGGACCCAGCAGCCAA...GGTCACCCACGATTTCATTTGTCTTATACCCAGGTGAAAGGGGAAGGGTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGCACTTTCCCTTCGAACAGCTTTaGCTGCTGGGTCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: DTVGLELANGSYSLTKHFPFEQL*LLGPGV
Trigger: GACCCCAGGACCCAGCAGCCAAAGCTGTTCGAAGGG...AAAGTGCTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GCAGGACTCATTCCTTTAATAGGATCAGCAGTGAGTTGGGGTACTTGGGAATGGTCTCTACCGTGGGCTTaGAGTCTGTCCAGTCACAGC +
Preference number: 4 (lower is better)
Translates to: AGLIPLIGSAVSWGTWEWSLPWA*SLSSHS
Trigger: GCTGTGACTGGACAGACTCCAAGCCCACGGTAGAGA...CCATTCCCAAGTACCCCAACTCACTGCTGATCCTATTAAAGGAATGAGTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CTCAAGGCTGAAGCAGCATGGTTAAGCATTCTTGTCCACAGTACTTGCGGACTTTCTCTACCGTGGGCTTaGAGTCTGTCCAGTCACAGC +
Preference number: 4 (lower is better)
Translates to: LKAEAAWLSILVHSTCGLSLPWA*SLSSHS
Trigger: GCTGTGACTGGACAGACTCCAAGCCCACGGTAGAGA...AAGTCCGCAAGTACTGTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GAGTGGCTTTCAAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGACCAGCGTCTCTACCGTaGGCTTGGAGTCTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: EWLSNLPSSAGYFWKSLGPASLP*AWSLSS
Trigger: ACTGGACAGACTCCAAGCCCACGGTAGAGACGCTGG...TCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GTTGTACATAACTTAGAGGTGAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGACCAGCGTCTCTACCGTaGGCTTGGAGTCTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: VVHNLEVKCRSETGLDFGPASLP*AWSLSS
Trigger: ACTGGACAGACTCCAAGCCCACGGTAGAGACGCTGG...TCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTCACCTCTAAGTTATGTACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GTTGTACATAACTTAGAGGTGAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGACGGTGGGGTAGGGGGTaGTTGTCTCTTCGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: VVHNLEVKCRSETGLDFGRWGRG*LSLRSS
Trigger: TGAAGAGCGAAGAGACAACCACCCCCTACCCCACCG...TCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTCACCTCTAAGTTATGTACAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGCACTTTAAACGTCCGGTCGTTTaGGCTGGAGCTGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: DTVGLELANGSYSLTKHFKRPVV*AGAAGP
Trigger: TGGGCCAGCAGCTCCAGCCCAAACGACCGGACGTTT...AAAGTGCTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp AGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACACCACCGAAATTCCTGTCATCTaGAAACGTCCGGTCGTTTGG +
Preference number: 4 (lower is better)
Translates to: SAKISCDTRTLGQSHNTTEIPVI*KRPVVW
Trigger: CCAAACGACCGGACGTTTCCAGATGACAGGAATTTC...GGTGGTGTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp AAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTACTGGCCCTCTCTCTaGCTGTCACTCTGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: KLTFFCRLLLEIPRTYQLYWPSL*LSLCSR
Trigger: GCGGCTGCAGAGTGACAGCCAGAGAGAGGGCCAGTA...AAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGCACTTTACTTGCTCTCCTGGCTaGCTTCCCGCACCACCTGCA +
Preference number: 4 (lower is better)
Translates to: DTVGLELANGSYSLTKHFTCSPG*LPAPPA
Trigger: TGCAGGTGGTGCGGGAAGCCAGCCAGGAGAGCAAGT...AAAGTGCTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp AGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCAAGATGCAGCATTATGGAGTGCTTGGGGGTaGATCTCTTCGGATAGTCCA +
Preference number: 4 (lower is better)
Translates to: SCGVLGGGSLRIVQDAALWSAWG*ISSDSP
Trigger: TGGACTATCCGAAGAGATCCACCCCCAAGCACTCCA...TAATGCTGCATCTTGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp TTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGAGAGTTGTGGAGTGCTTaGGGGTGGATCTCTTCGGAT +
Preference number: 4 (lower is better)
Translates to: LGLIRVLRVGDPGKRCLRELWSA*GWISSD
Trigger: ATCCGAAGAGATCCACCCCCAAGCACTCCACAACTC...TCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp GCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTCTTGCTTCGGCCCTGAGCCTTGAGTTGTaGAGTGCTTGGGGGTGGATC +
Preference number: 4 (lower is better)
Translates to: ATCLQSFSFVLGAVLASALSLEL*SAWGWI
Trigger: GATCCACCCCCAAGCACTCCACAACTCAAGGCTCAG...GGCCGAAGCAAGAACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp GAGTGGCTTTCAAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGAAACCAAGACTTGCCTTaGGCATCACACGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: EWLSNLPSSAGYFWKSLGNQDLP*ASHGPQ
Trigger: CTGGGGGCCGTGTGATGCCCAAGGCAAGTCTTGGTT...TCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp ATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGCCATTTTGGAGAAGGTaGCTCTTTCCAGAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: MGHHQSQLPVPHLASLLRPFWRR*LFPELG
Trigger: ACCCAGCTCTGGAAAGAGCCACCTTCTCCAAAATGG...CCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CCA 90 bp AGGACTTACCAGCTTTCTGAACACTGCGCATCATGGGAGGGTGAAGAGGAAAAGGCTTGTAGGGTTGGCTaGCAGAACCTACACCACAGT +
Preference number: 4 (lower is better)
Translates to: RTYQLSEHCASWEGEEEKACRVG*QNLHHS
Trigger: ACTGTGGTGTAGGTTCTGCCAGCCAACCCTACAAGC...CTTTTCCTCTTCACCCTCCCATGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TCAAGTTCCCGTGATCTGGCTCAGCCAGTGAATGGTCGAATACCTCTAACTGCAATCTTGCTTCTACTGTaGGCCGAACTCAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SSSRDLAQPVNGRIPLTAILLLL*AELRRS
Trigger: GCTCCTCCTGAGTTCGGCCCACAGTAGAAGCAAGAT...TGCAGTTAGAGGTATTCGACCATTCACTGGCTGAGCCAGATCACGGGAACTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp AGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTCTGAACACTGCGCATCACACCAAGGTGTCCCCTaGCCAAGTCAAAATTGGGCC +
Preference number: 4 (lower is better)
Translates to: RLLLEIPRTYQLSEHCASHQGVP*PSQNWA
Trigger: GGCCCAATTTTGACTTGGCCAGGGGACACCTTGGTG...TGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAGAACTGTAAAATGGCTCACTCACCAAGGTGTCCCCTaGCCAAGTCAAAATTGGGCC +
Preference number: 4 (lower is better)
Translates to: EVQVRNRARLWRTVKWLTHQGVP*PSQNWA
Trigger: GGCCCAATTTTGACTTGGCCAGGGGACACCTTGGTG...AGTGAGCCATTTTACAGTTCTCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR CAA 72 bp AACCAGTCTCTGGAACAAAACCAGCTGAGCCTTGAGTaGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGT +
Preference number: 4 (lower is better)
Translates to: NQSLEQNQLSLE*WSAWGWISSDS
Trigger: ACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAGAGACTGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
3UTR CAA 72 bp AGCAGGACTCATTCCTTTAATAGGATCAGCAGTGAGTaGGGGTACTTGGGAATGGAGCCATCGGGGTTAGGG +
Preference number: 4 (lower is better)
Translates to: SRTHSFNRISSE*GYLGMEPSGLG
Trigger: CCCTAACCCCGATGGCTCCATTCCCAAGTACCCCAACTCACTGCTGATCCTATTAAAGGAATGAGTCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp CCACCAGACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGGGTAACCGGGAGAGGTaGTATAGCCAGCATCTTTGG +
Preference number: 4 (lower is better)
Translates to: PPDTVGLELANGSYSLTKGNRER*YSQHLW
Trigger: CCAAAGATGCTGGCTATATCACCTCTCCCGGTTACC...CTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTCTGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp CATTCACCCTTCCCCTTTCACCTGGGTATAAGACAAATGAAATCGTGGGTGACCCTTCAGAGCCTGTCTTaGAGATCTCGTAGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: HSPFPFHLGIRQMKSWVTLQSLS*RSRSAE
Trigger: CTCTGCGCTACGAGATCTTCAAGACAGGCTCTGAAG...GGTCACCCACGATTTCATTTGTCTTATACCCAGGTGAAAGGGGAAGGGTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp TCAAGTTCCCGTGATCTGGCTCAGCCAGTGAATGGTCGAATACCTCTAACTGCATCAGGAACTGCAGGATaGTCTCCATCTTGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: SSSRDLAQPVNGRIPLTASGTAG*SPSWVW
Trigger: CCAAACCCAAGATGGAGATCATCCTGCAGTTCCTGA...TGCAGTTAGAGGTATTCGACCATTCACTGGCTGAGCCAGATCACGGGAACTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GTGCCGAGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACATCAGAGTAGGTAGATaGGGCACTGATCTGTTCATT +
Preference number: 4 (lower is better)
Translates to: VPSAKISCDTRTLGQSHNIRVGR*GTDLFI
Trigger: AATGAACAGATCAGTGCCTCATCTACCTACTCTGAT...GTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACTCGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp CAGCCGCTCTCTCACACACCCACACACAGAGAGCTATTCACACACACACATGTCCCAGCTTGTAGGATTTaGCATAGTAGCCATTCTGTG +
Preference number: 4 (lower is better)
Translates to: QPLSHTPTHRELFTHTHVPACRI*HSSHSV
Trigger: CACAGAATGGCTACTATGTCAAATCCTACAAGCTGG...GACATGTGTGTGTGTGAATAGCTCTCTGTGTGTGGGTGTGTGAGAGAGCGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp GAGTGGCTTTCAAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGACCTGAGTGCCAGGTCTaGGGGCGGATTCTAACAAAC +
Preference number: 4 (lower is better)
Translates to: EWLSNLPSSAGYFWKSLGPECQV*GRILTN
Trigger: GTTTGTTAGAATCCGCCCTCAGACCTGGCACTCAGG...TCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GCAAACCCTGAAAAAGTTAACCTGCTATGTGACAGGTTAACTCTTTCCCTTGTTAGCAGGGAGCATCTGTaGCCCGGCAGCCGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: ANPEKVNLLCDRLTLSLVSREHL*PGSRRA
Trigger: AGCTCTTCGGCTGCCGGGTCACAGATGCTCCCTGCT...AACAAGGGAAAGAGTTAACCTGTCACATAGCAGGTTAACTTTTTCAGGGTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGCACTTTTCTGGGAGTCTGCAATaGGGCCTGAGAGCATCCCCA +
Preference number: 4 (lower is better)
Translates to: DTVGLELANGSYSLTKHFSGSLQ*GLRASP
Trigger: TGGGGATGCTCTCAGGCCTCATTGCAGACTCCCAGA...AAAGTGCTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp TACCCCAGGAGAAGTAACATAAGAGTTAAAGGGGCCCTCTCTGAACACTCACCCGGCTGTAGGAGACTTTaGACTTGCGCACAAATGCTC +
Preference number: 4 (lower is better)
Translates to: YPRRSNIRVKGALSEHSPGCRRL*TCAQML
Trigger: GAGCATTTGTGCGCAAGTTCAAAGTCTCCTACAGCC...GGGTGAGTGTTCAGAGAGGGCCCCTTTAACTCTTATGTTACTTCTCCTGGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp GAGTGGCTTTCAAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGATGGGTCCTGGGGTCCTaGATGTATTCCCAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: EWLSNLPSSAGYFWKSLGWVLGS*MYSQSL
Trigger: CAAGGACTGGGAATACATTCAGGACCCCAGGACCCA...TCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp AGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCAAGATGCAGCATTAGGGAGGTTTTGTAGGTaGTGGAGTGATCGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SCGVLGGGSLRIVQDAALGRFCR*WSDRSS
Trigger: AGAAGACCGATCACTCCATCACCTACAAAACCTCCC...TAATGCTGCATCTTGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp AGAAGTAACATAAGAGTTAAAGGGGCCCTCTCTGAACACTCACCCCTCGCCCAATGGAACAAAACCAGCTaGGCCTTGAGTTGTGGAGTG +
Preference number: 4 (lower is better)
Translates to: RSNIRVKGALSEHSPLAQWNKTS*ALSCGV
Trigger: CACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCA...TTGGGCGAGGGGTGAGTGTTCAGAGAGGGCCCCTTTAACTCTTATGTTACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp GCCACACCTCTATGGGGCACCTACAGGAATGTCAATCATTTCGCAGGCATGCCTGTTGAGTGTGTGTGCTaGAGGGACATATCTGGATAT +
Preference number: 4 (lower is better)
Translates to: ATPLWGTYRNVNHFAGMPVECVC*RDISGY
Trigger: ATATCCAGATATGTCCCTTCAGCACACACACTCAAC...AGGCATGCCTGCGAAATGATTGACATTCCTGTAGGTGCCCCATAGAGGTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR TCA 90 bp GACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGCACTTTCCCCAGGCAGCTGTGTaGTCTCAGAGGCGTAAACTG +
Preference number: 4 (lower is better)
Translates to: DTVGLELANGSYSLTKHFPQAAV*SQRRKL
Trigger: CAGTTTACGCCTCTGAGATCACACAGCTGCCTGGGG...AAAGTGCTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GAGTGGCTTTCAAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGATCAGCGTTTCCCTCCTaGGTCCTGGTGGCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: EWLSNLPSSAGYFWKSLGSAFPS*VLVACL
Trigger: AAGACAAGCCACCAGGACTCAGGAGGGAAACGCTGA...TCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GCAAACCCTGAAAAAGTTAACCTGCTATGTGACAGGTTAACTCTTTCCCTTGTTGCCCCGTTCCTGCAATaGCTTAGCCACCGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: ANPEKVNLLCDRLTLSLVAPFLQ*LSHRGP
Trigger: AGGACCGCGGTGGCTAAGTCATTGCAGGAACGGGGC...AACAAGGGAAAGAGTTAACCTGTCACATAGCAGGTTAACTTTTTCAGGGTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp AGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACACCACCCCTTTGAAGAGTAGTTaGGAGTCATCTAGGGCTATG +
Preference number: 4 (lower is better)
Translates to: SAKISCDTRTLGQSHNTTPLKSS*ESSRAM
Trigger: CATAGCCCTAGATGACTCTCAACTACTCTTCAAAGG...GGTGGTGTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp AGGACTTACCAGCTTTCTGAACACTGCGCATCATGGGAGGGTGAAGAGGAAAAGTCACAACACCACCACTaGGTCCCACATGACCATTCA +
Preference number: 4 (lower is better)
Translates to: RTYQLSEHCASWEGEEEKSQHHH*VPHDHS
Trigger: TGAATGGTCATGTGGGACTCAGTGGTGGTGTTGTGA...CTTTTCCTCTTCACCCTCCCATGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GAGTGGCTTTCAAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGACTACCACTGTGCCAATaGGTGCCGAGTGCCAAGATC +
Preference number: 4 (lower is better)
Translates to: EWLSNLPSSAGYFWKSLGLPLCQ*VPSAKI
Trigger: GATCTTGGCACTCGGCACTCATTGGCACAGTGGTAG...TCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GTTGTACATAACTTAGAGGTGAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGATTTGCCCAGGAGGTCTaGGGATTCACTGTCCCCATC +
Preference number: 4 (lower is better)
Translates to: VVHNLEVKCRSETGLDFGFAQEV*GFTVPI
Trigger: GATGGGGACAGTGAATCCGCAGACCTCCTGGGCAAA...TCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTCACCTCTAAGTTATGTACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp AAAATGAACCCAAGGAGGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATGTTCCCACAGTGTTTaGCCAGGAGGTCTGCGGATT +
Preference number: 4 (lower is better)
Translates to: KMNPRRMVGIDKSAQGWGCSHSV*PGGLRI
Trigger: AATCCGCAGACCTCCTGGGCAAACACTGTGGGAACA...TCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCCTCCTTGGGTTCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp GCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTCTTGCTTCGGCCTGTTCCCACAGTGTTTaGCCAGGAGGTCTGCGGATT +
Preference number: 4 (lower is better)
Translates to: ATCLQSFSFVLGAVLASACSHSV*PGGLRI
Trigger: AATCCGCAGACCTCCTGGGCAAACACTGTGGGAACA...GGCCGAAGCAAGAACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp GTTGTACATAACTTAGAGGTGAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAGGCCAACATGTGGAATaGCATCCCAGATGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: VVHNLEVKCRSETGLDFGGQHVE*HPRCPA
Trigger: GGCTGGACATCTGGGATGGCATTCCACATGTTGGCC...TCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTCACCTCTAAGTTATGTACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp AAACAAGCGAACCAGTCTCTGGAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTTGGTCCCACAGTACTTaGCAATCAGGGGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: KQANQSLEQNQLSLELWSWSHST*QSGGQH
Trigger: ATGTTGGCCCCCTGATTGGCAAGTACTGTGGGACCA...ACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAGAGACTGGTTCGCTTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp AGAAGTAACATAAGAGTTAAAGGGGCCCTCTCTGAACACTCACCCCTCGCCCAATTGTGGTTTTTGCCATaGCGGTACACCATCCAGTCC +
Preference number: 4 (lower is better)
Translates to: RSNIRVKGALSEHSPLAQLWFLP*RYTIQS
Trigger: GGACTGGATGGTGTACCGGCATGGCAAAAACCACAA...TTGGGCGAGGGGTGAGTGTTCAGAGAGGGCCCCTTTAACTCTTATGTTACTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp ATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGTGTATTCCCAGTCCTTaGCGTTTAGGCTGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: MGHHQSQLPVPHLASLLRCIPSP*RLGCRR
Trigger: TCTCCTACAGCCTAAACGGCAAGGACTGGGAATACA...CCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR GCA 90 bp GCAGGACTCATTCCTTTAATAGGATCAGCAGTGAGTTGGGGTACTTGGGAATGGCTCTGGCTGTCACTCTaGAGCCGCAAGAAATTCCTG +
Preference number: 4 (lower is better)
Translates to: AGLIPLIGSAVSWGTWEWLWLSL*SRKKFL
Trigger: CAGGAATTTCTTGCGGCTGCAGAGTGACAGCCAGAG...CCATTCCCAAGTACCCCAACTCACTGCTGATCCTATTAAAGGAATGAGTCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp TGCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTGGTACTGGAACTCCATaGACACCGGGCTTCGGGGCA +
Preference number: 4 (lower is better)
Translates to: CKIEATCLQSFSFVLGAVGTGTP*TPGFGA
Trigger: TGCCCCGAAGCCCGGTGTGCATGGAGTTCCAGTACC...AACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp TTTCCAGCACACAGGCAATCCTTAGGCGTTAATATGAAATCAAGATTTGGATCTAGGATGATCCGCCCGTaGTTCCACTCGCCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: FPAHRQSLGVNMKSRFGSRMIRP*FHSPPW
Trigger: CCAGGGCGGCGAGTGGAAGCACGGGCGGATCATCCT...AGATCCAAATCTTGATTTCATATTAACGCCTAAGGATTGCCTGTGTGCTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAGAACTGTAAAATGGCTCACTCCGAGATGGGTTCCATaGAGTTCTCCAGTGGGACAT +
Preference number: 4 (lower is better)
Translates to: EVQVRNRARLWRTVKWLTPRWVP*SSPVGH
Trigger: ATGTCCCACTGGAGAACTGCATGGAACCCATCTCGG...AGTGAGCCATTTTACAGTTCTCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp AGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCAAGATGCAGCATTATGCGAGCCACGGTCTTaGTCTAGCTTAATGGTTAGG +
Preference number: 4 (lower is better)
Translates to: SCGVLGGGSLRIVQDAALCEPRS*SSLMVR
Trigger: CCTAACCATTAAGCTAGAGCAAGACCGTGGCTCGCA...TAATGCTGCATCTTGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp AGAAGTAACATAAGAGTTAAAGGGGCCCTCTCTGAACACTCACCCCTCGCCCAACTCGTTTGTTTTGGGTaGTGTTCTTGCTTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: RSNIRVKGALSEHSPLAQLVCFG*CSCFGP
Trigger: AGGGCCGAAGCAAGAACAGCACCCAAAACAAACGAG...TTGGGCGAGGGGTGAGTGTTCAGAGAGGGCCCCTTTAACTCTTATGTTACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp CAGCCGCTCTCTCACACACCCACACACAGAGAGCTATTCACACACACACATGTCTCTCAAGGTAGCACATaGTCTAGCCTTTCATCTTGC +
Preference number: 4 (lower is better)
Translates to: QPLSHTPTHRELFTHTHVSQGST*SSLSSC
Trigger: GCAAGATGAAAGGCTAGAGCATGTGCTACCTTGAGA...GACATGTGTGTGTGTGAATAGCTCTCTGTGTGTGGGTGTGTGAGAGAGCGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR GCA 90 bp TCAAGTTCCCGTGATCTGGCTCAGCCAGTGAATGGTCGAATACCTCTAACTGCATTCTGGGATGTCCACTaGAAAAGCCGAGATGGGTTC +
Preference number: 4 (lower is better)
Translates to: SSSRDLAQPVNGRIPLTAFWDVH*KSRDGF
Trigger: GAACCCATCTCGGCTTTTGCAGTGGACATCCCAGAA...TGCAGTTAGAGGTATTCGACCATTCACTGGCTGAGCCAGATCACGGGAACTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357785.10
CDS-3UTR GCA 90 bp AGAAAGCAACCCTGTGGCCCTGTTGACCACCTAGTCCGGGAGAGTGTGGAGGTATCTGCCTCTTTGAGTTaGTCACAGACCAAAGAAATA +
Preference number: 4 (lower is better)
Translates to: RKQPCGPVDHLVRESVEVSASLS*SQTKEI
Trigger: TATTTCTTTGGTCTGTGAGCAACTCAAAGAGGCAGA...TACCTCCACACTCTCCCGGACTAGGTGGTCAACAGGGCCACAGGGTTGCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp AGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTCTGAACACTGCGCATCACACTGTGCCAATGAGTaGCGAGTGCCAAGATCAGCT +
Preference number: 4 (lower is better)
Translates to: RLLLEIPRTYQLSEHCASHCANE*RVPRSA
Trigger: AGCTGATCTTGGCACTCGGCACTCATTGGCACAGTG...TGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp CCACCAGACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGCACTGTGCCAATGAGTaGCGAGTGCCAAGATCAGCT +
Preference number: 4 (lower is better)
Translates to: PPDTVGLELANGSYSLTKHCANE*RVPRSA
Trigger: AGCTGATCTTGGCACTCGGCACTCATTGGCACAGTG...CTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTCTGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp TCAAGTTCCCGTGATCTGGCTCAGCCAGTGAATGGTCGAATACCTCTAACTGCACAGCTTTCTGAACACTaGGCATCATGGGAGGGTGAA +
Preference number: 4 (lower is better)
Translates to: SSSRDLAQPVNGRIPLTAQLSEH*ASWEGE
Trigger: TTCACCCTCCCATGATGCGCAGTGTTCAGAAAGCTG...TGCAGTTAGAGGTATTCGACCATTCACTGGCTGAGCCAGATCACGGGAACTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GTCCAGGCGCTTCTATGGATTTTGACGTGTGAAGTTTCCTTTCCAGTTTGTTTTTCCGCACGGTGGGTCTaGTTGGCCTCTCACTTGGTG +
Preference number: 4 (lower is better)
Translates to: VQALLWILTCEVSFPVCFSARWV*LASHLV
Trigger: CACCAAGTGAGAGGCCAACCAGACCCACCGTGCGGA...AAAACAAACTGGAAAGGAAACTTCACACGTCAAAATCCATAGAAGCGCCTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TTTATTGGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCACGACCTCCGCACGGTaGGTCTGGTTGGCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: FIGFQELDDDCLDGTSSVTTSAR*VWLASH
Trigger: GTGAGAGGCCAACCAGACCCACCGTGCGGAGGTCGT...GACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCCAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CCA 90 bp AGGACTTACCAGCTTTCTGAACACTGCGCATCATGGGAGGGTGAAGAGGAAAAGGGACAATCTTCTGGTTaGGTTCGGGGGCGTAAACAA +
Preference number: 4 (lower is better)
Translates to: RTYQLSEHCASWEGEEEKGQSSG*VRGRKQ
Trigger: TTGTTTACGCCCCCGAACCCAACCAGAAGATTGTCC...CTTTTCCTCTTCACCCTCCCATGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTGCAGTCCAAGTTGTGTaGATACTTCTCAGGAAACCC +
Preference number: 4 (lower is better)
Translates to: GWLGLIRVLRVGDPGKRCAVQVV*ILLRKP
Trigger: GGGTTTCCTGAGAAGTATCCACACAACTTGGACTGC...ACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp CAAGGAGATGGGTCAGCTAGCCTACCCACAGATAAAGATAACAAACACACCAAGCAGGGGGCCAACATGTaGAATGCCATCCCAGATGTC +
Preference number: 4 (lower is better)
Translates to: QGDGSASLPTDKDNKHTKQGANM*NAIPDV
Trigger: GACATCTGGGATGGCATTCCACATGTTGGCCCCCTG...CTTGGTGTGTTTGTTATCTTTATCTGTGGGTAGGCTAGCTGACCCATCTCCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp AGGAGAAGTAACATAAGAGTTAAAGGGGCCCTCTCTGAACACTCACCCCTCGCCGTTCAGAGGGTGTTTTaGTCCCACAGTACTTGCCAA +
Preference number: 4 (lower is better)
Translates to: RRSNIRVKGALSEHSPLAVQRVF*SHSTCQ
Trigger: TTGGCAAGTACTGTGGGACCAAAACACCCTCTGAAC...GGCGAGGGGTGAGTGTTCAGAGAGGGCCCCTTTAACTCTTATGTTACTTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp GATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGTTCAGAGGGTGTTTTaGTCCCACAGTACTTGCCAA +
Preference number: 4 (lower is better)
Translates to: DGTSSVSTPCTTLSLPVEVQRVF*SHSTCQ
Trigger: TTGGCAAGTACTGTGGGACCAAAACACCCTCTGAAC...CTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CCA 90 bp CAAAGACACCAGAAGACAAGGGGGTCTTGTTTGAGTGTGCTAGGGGAACCTTCTGGAGATACTCCTTGTTaGAATCCAAGTTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: QRHQKTRGSCLSVLGEPSGDTPC*NPSWGS
Trigger: GGACCCCCAACTTGGATTCCAACAAGGAGTATCTCC...AGAAGGTTCCCCTAGCACACTCAAACAAGACCCCCTTGTCTTCTGGTGTCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CCA 90 bp TCAAGTTCCCGTGATCTGGCTCAGCCAGTGAATGGTCGAATACCTCTAACTGCAGGAGATACTCCTTGTTaGAATCCAAGTTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SSSRDLAQPVNGRIPLTAGDTPC*NPSWGS
Trigger: GGACCCCCAACTTGGATTCCAACAAGGAGTATCTCC...TGCAGTTAGAGGTATTCGACCATTCACTGGCTGAGCCAGATCACGGGAACTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp AGAAGTAACATAAGAGTTAAAGGGGCCCTCTCTGAACACTCACCCCTCGCCCAAAAGCGCAGGTCCACCTaGAGATACTCCTTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: RSNIRVKGALSEHSPLAQKRRST*RYSLLE
Trigger: TTCCAACAAGGAGTATCTCCAGGTGGACCTGCGCTT...TTGGGCGAGGGGTGAGTGTTCAGAGAGGGCCCCTTTAACTCTTATGTTACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp CTCTATGGGGCACCTACAGGAATGTCAATCATTTCGCAGGCATGCCTGGCCCCACAGTTGCATCGTTGTTaGCTTGAAATACCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: LYGAPTGMSIISQACLAPQLHRC*LEIPCG
Trigger: ACCACAAGGTATTTCAAGCCAACAACGATGCAACTG...TGGGGCCAGGCATGCCTGCGAAATGATTGACATTCCTGTAGGTGCCCCATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CCA 90 bp TTTATTGGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCCCAGGCGGGCTGCACTaGGGCTCCAGAGGTATTCCT +
Preference number: 4 (lower is better)
Translates to: FIGFQELDDDCLDGTSSVPGGLH*GSRGIP
Trigger: AGGAATACCTCTGGAGCCCCAGTGCAGCCCGCCTGG...GACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCCAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CCA 90 bp TACCCCAGGAGAAGTAACATAAGAGTTAAAGGGGCCCTCTCTGAACACTCACCCCATACTGTGCCGGAATaGGGTCAAACCTTCGGATGT +
Preference number: 4 (lower is better)
Translates to: YPRRSNIRVKGALSEHSPHTVPE*GQTFGC
Trigger: ACATCCGAAGGTTTGACCCCATTCCGGCACAGTATG...GGGTGAGTGTTCAGAGAGGGCCCCTTTAACTCTTATGTTACTTCTCCTGGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp AAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTCTTCGCTCTTCACAGTaGGTCCCAGCGTCTCTACCG +
Preference number: 4 (lower is better)
Translates to: KLTFFCRLLLEIPRTYQLLRSSQ*VPASLP
Trigger: CGGTAGAGACGCTGGGACCCACTGTGAAGAGCGAAG...AAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TGCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTTCTCCCCACACTCTGTaGCCTCCTCTTCGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: CKIEATCLQSFSFVLGAVSPHTL*PPLRWG
Trigger: ACCCCACCGAAGAGGAGGCCACAGAGTGTGGGGAGA...AACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp AAAATGAACCCAAGGAGGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGACGGAGCCACTTGGCATaGTCATACATCCAACCACAG +
Preference number: 4 (lower is better)
Translates to: KMNPRRMVGIDKSAQGWGRSHLA*SYIQPQ
Trigger: CTGTGGTTGGATGTATGACCATGCCAAGTGGCTCCG...TCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCCTCCTTGGGTTCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp CATTCACCCTTCCCCTTTCACCTGGGTATAAGACAAATGAAATCGTGGGTGACCTGGTCCGGAGCCACTTaGCATGGTCATACATCCAAC +
Preference number: 4 (lower is better)
Translates to: HSPFPFHLGIRQMKSWVTWSGAT*HGHTSN
Trigger: GTTGGATGTATGACCATGCCAAGTGGCTCCGGACCA...GGTCACCCACGATTTCATTTGTCTTATACCCAGGTGAAAGGGGAAGGGTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TGCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTTACTGGCCCTCTCTCTaGCTGTCACTCTGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: CKIEATCLQSFSFVLGAVYWPSL*LSLCSR
Trigger: GCGGCTGCAGAGTGACAGCCAGAGAGAGGGCCAGTA...AACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp CAAGCGAACCAGTCTCTGGAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTTCCGAATGTCATCAATaGCAATCTCTCCGGAACGTC +
Preference number: 4 (lower is better)
Translates to: QANQSLEQNQLSLELWSASECHQ*QSLRNV
Trigger: GACGTTCCGGAGAGATTGCCATTGATGACATTCGGA...AGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAGAGACTGGTTCGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp TTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGACATGCAGTTCTCCAGTaGGACATCAGTGCTTATCCG +
Preference number: 4 (lower is better)
Translates to: LGLIRVLRVGDPGKRCLRHAVLQ*DISAYP
Trigger: CGGATAAGCACTGATGTCCCACTGGAGAACTGCATG...TCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp TACCCCAGGAGAAGTAACATAAGAGTTAAAGGGGCCCTCTCTGAACACTCACCCCTGCAAAAGCCGAGATaGGTTCCATGCAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: YPRRSNIRVKGALSEHSPLQKPR*VPCSSP
Trigger: TGGAGAACTGCATGGAACCCATCTCGGCTTTTGCAG...GGGTGAGTGTTCAGAGAGGGCCCCTTTAACTCTTATGTTACTTCTCCTGGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp GCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTCTTGCTTCGGCCTTGGCAGGGCTGCTGTaGTTGAGACAGAGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: ATCLQSFSFVLGAVLASALAGLL*LRQSSS
Trigger: AGAGCTACTCTGTCTCAACCACAGCAGCCCTGCCAA...GGCCGAAGCAAGAACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CCA 90 bp AAACAAGCGAACCAGTCTCTGGAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTCCCCAAATGCATGACTaGATGTGGACAGCCGAGGTA +
Preference number: 4 (lower is better)
Translates to: KQANQSLEQNQLSLELWSPQMHD*MWTAEV
Trigger: TACCTCGGCTGTCCACATCCAGTCATGCATTTGGGG...ACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAGAGACTGGTTCGCTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CCA 90 bp TACAGGAATGTCAATCATTTCGCAGGCATGCCTGGCCCCAAATGCATGACTGGAAATGCCACACCTCTATaGGGCACCTACAGGAATGTC +
Preference number: 4 (lower is better)
Translates to: YRNVNHFAGMPGPKCMTGNATPL*GTYRNV
Trigger: GACATTCCTGTAGGTGCCCCATAGAGGTGTGGCATT...TCCAGTCATGCATTTGGGGCCAGGCATGCCTGCGAAATGATTGACATTCCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CCA 90 bp AGGACTTACCAGCTTTCTGAACACTGCGCATCATGGGAGGGTGAAGAGGAAAAGCAGCATCAGGACCCCTaGAGTGGCTTTCAAACTTAC +
Preference number: 4 (lower is better)
Translates to: RTYQLSEHCASWEGEEEKQHQDP*SGFQTY
Trigger: GTAAGTTTGAAAGCCACTCCAGGGGTCCTGATGCTG...CTTTTCCTCTTCACCCTCCCATGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR CAA 72 bp GAACTCAGGAGGAGCCCTAAAGCTAAGCCCTTGGGCTaGACAGCTCTACTTTTCACCTCTAACTACCACTGT +
Preference number: 4 (lower is better)
Translates to: ELRRSPKAKPLG*TALLFTSNYHC
Trigger: ACAGTGGTAGTTAGAGGTGAAAAGTAGAGCTGTCAAGCCCAAGGGCTTAGCTTTAGGGCTCCTCCTGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GTTGTACATAACTTAGAGGTGAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAGGTAACCGGGAGAGGTaGTATAGCCAGCATCTTTGG +
Preference number: 4 (lower is better)
Translates to: VVHNLEVKCRSETGLDFGGNRER*YSQHLW
Trigger: CCAAAGATGCTGGCTATATCACCTCTCCCGGTTACC...TCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTCACCTCTAAGTTATGTACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp AAACAAGCGAACCAGTCTCTGGAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTTCAGGAACTGCAGGATaGTCTCCATCTTGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: KQANQSLEQNQLSLELWSSGTAG*SPSWVW
Trigger: CCAAACCCAAGATGGAGATCATCCTGCAGTTCCTGA...ACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAGAGACTGGTTCGCTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp AGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGAGTTCACACAGAACCAGCTTGTAGGATTTaGCATAGTAGCCATTCTGTG +
Preference number: 4 (lower is better)
Translates to: RVLRVGDPGKRCLRVHTEPACRI*HSSHSV
Trigger: CACAGAATGGCTACTATGTCAAATCCTACAAGCTGG...TTCTGTGTGAACTCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp GAGAAAGCGGAGAATAATGATCACTGCTCCACTTCTATTCTGGAAAAGTCATTCTGGCTTCCACAGCAGTaGTACTGTCTCCTCCGCGGG +
Preference number: 4 (lower is better)
Translates to: EKAENNDHCSTSILEKSFWLPQQ*YCLLRG
Trigger: CCCGCGGAGGAGACAGTATCACTGCTGTGGAAGCCA...GAATGACTTTTCCAGAATAGAAGTGGAGCAGTGATCATTATTCTCCGCTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp CTCAAGGCTGAAGCAGCATGGTTAAGCATTCTTGTCCACAGTACTTGCGGACTTGGCTGTAGGAGACTTTaGACTTGCGCACAAATGCTC +
Preference number: 4 (lower is better)
Translates to: LKAEAAWLSILVHSTCGLGCRRL*TCAQML
Trigger: GAGCATTTGTGCGCAAGTTCAAAGTCTCCTACAGCC...AAGTCCGCAAGTACTGTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCTCAACTTGGGTCCTGGGGTCCTaGATGTATTCCCAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: GFQELDDDCLDGTSSVSTWVLGS*MYSQSL
Trigger: CAAGGACTGGGAATACATTCAGGACCCCAGGACCCA...AGTTGAGACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR TCA 90 bp GAGTGGCTTTCAAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGAGTGACCCCAAAGAGATaGGCTCCTGTTTTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: EWLSNLPSSAGYFWKSLGVTPKR*APVLSQ
Trigger: CTGGGACAAAACAGGAGCTCATCTCTTTGGGGTCAC...TCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp CCACCAGACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGCTAAGCCCTTGGGCTTaGCAGCTCTACTTTTCACCT +
Preference number: 4 (lower is better)
Translates to: PPDTVGLELANGSYSLTKLSPWA*QLYFSP
Trigger: AGGTGAAAAGTAGAGCTGTCAAGCCCAAGGGCTTAG...CTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTCTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGTCAAAGATCAGGAACTaGAGGATGATCTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: EQNQLSLELWSAWGWISSSKIRN*RMISIL
Trigger: CAAGATGGAGATCATCCTGCAGTTCCTGATCTTTGA...CGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp CTCTGTTCTCCTTCCCGTCCAGTGGTGACCAGTTACAATAACTCGCTGATGGGGTCAAAGATCAGGAACTaGAGGATGATCTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: LCSPSRPVVTSYNNSLMGSKIRN*RMISIL
Trigger: CAAGATGGAGATCATCCTGCAGTTCCTGATCTTTGA...CCCCATCAGCGAGTTATTGTAACTGGTCACCACTGGACGGGAAGGAGAACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GTGCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTGGCCAACATGTGGAATaGCATCCCAGATGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: VQNRGNMFAVFLVCFGCCGQHVE*HPRCPA
Trigger: GGCTGGACATCTGGGATGGCATTCCACATGTTGGCC...ACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp ATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGTGCCCAGAGGAACATTaGACTGAAAGTTCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: MGHHQSQLPVPHLASLLRCPEEH*TESSLV
Trigger: CACTAGAGAACTTTCAGTGCAATGTTCCTCTGGGCA...CCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR GCA 90 bp GGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCTCAACTAATCGCTCCCTGTGTTaGGATGGCCGTGAGCATGGT +
Preference number: 4 (lower is better)
Translates to: GFQELDDDCLDGTSSVSTNRSLC*DGREHG
Trigger: ACCATGCTCACGGCCATCGCAACACAGGGAGCGATT...AGTTGAGACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR GCA 90 bp ACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGGTAACATACCTTGTGGTTTTTaGCATGCCGGTACACCATCC +
Preference number: 4 (lower is better)
Translates to: TSSVSTPCTTLSLPVEGNIPCGF*HAGTPS
Trigger: GGATGGTGTACCGGCATGGCAAAAACCACAAGGTAT...GTTACCCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR GCA 90 bp GATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGCAGAACCACCTCAGTTaGATCGTTGTTGGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: DGTSSVSTPCTTLSLPVEQNHLS*IVVGLK
Trigger: TTTCAAGCCAACAACGATGCAACTGAGGTGGTTCTG...CTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR GCA 90 bp CCACCAGACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGGAACTTGCGCACAAATaGTCTGGCTTCCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: PPDTVGLELANGSYSLTKELAHK*SGFHSS
Trigger: ACTGCTGTGGAAGCCAGAGCATTTGTGCGCAAGTTC...CTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTCTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp AGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTCTGAACACTGCGCATCAGAACTTGCGCACAAATaGTCTGGCTTCCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: RLLLEIPRTYQLSEHCASELAHK*SGFHSS
Trigger: ACTGCTGTGGAAGCCAGAGCATTTGTGCGCAAGTTC...TGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp TCAAGTTCCCGTGATCTGGCTCAGCCAGTGAATGGTCGAATACCTCTAACTGCATGTATTCCCAGTCCTTaGCGTTTAGGCTGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: SSSRDLAQPVNGRIPLTACIPSP*RLGCRR
Trigger: TCTCCTACAGCCTAAACGGCAAGGACTGGGAATACA...TGCAGTTAGAGGTATTCGACCATTCACTGGCTGAGCCAGATCACGGGAACTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp CAAGCGAACCAGTCTCTGGAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTCCAGTGGGACATCAGTaGTTATCCGAATGTCATCAA +
Preference number: 4 (lower is better)
Translates to: QANQSLEQNQLSLELWSAPVGHQ*LSECHQ
Trigger: TTGATGACATTCGGATAAGCACTGATGTCCCACTGG...AGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAGAGACTGGTTCGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp AGGAGAAGTAACATAAGAGTTAAAGGGGCCCTCTCTGAACACTCACCCCTCGCCAAACACATGCATGCATaGATTCGCCTGTCCAGTCTA +
Preference number: 4 (lower is better)
Translates to: RRSNIRVKGALSEHSPLAKHMHA*IRLSSL
Trigger: TAGACTGGACAGGCGAATGCATGCATGCATGTGTTT...GGCGAGGGGTGAGTGTTCAGAGAGGGCCCCTTTAACTCTTATGTTACTTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR GCA 90 bp TACAGGAATGTCAATCATTTCGCAGGCATGCCTGGCCCCAAATGCATGACTGGACAGGCAACTGAGCAATaGAAGGGGTGTCACAGTAAT +
Preference number: 4 (lower is better)
Translates to: YRNVNHFAGMPGPKCMTGQATEQ*KGCHSN
Trigger: ATTACTGTGACACCCCTTGCATTGCTCAGTTGCCTG...TCCAGTCATGCATTTGGGGCCAGGCATGCCTGCGAAATGATTGACATTCCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR GCA 90 bp TCAAGTTCCCGTGATCTGGCTCAGCCAGTGAATGGTCGAATACCTCTAACTGCAATTAAAACCAAGACTTaGCTTGGGCATCACACGGCC +
Preference number: 4 (lower is better)
Translates to: SSSRDLAQPVNGRIPLTAIKTKT*LGHHTA
Trigger: GGCCGTGTGATGCCCAAGGCAAGTCTTGGTTTTAAT...TGCAGTTAGAGGTATTCGACCATTCACTGGCTGAGCCAGATCACGGGAACTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGGTACTTCACCTCTATTCTTaGTGGAATTTCCACCTCACC +
Preference number: 4 (lower is better)
Translates to: GHHQSQLPVPHLASLLRVLHLYS*WNFHLT
Trigger: GGTGAGGTGGAAATTCCAGCAAGAATAGAGGTGAAG...TACCCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR GCA 90 bp CCACCAGACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGTTCCCCAGCCCCTCTTaGTGGAATGAAACGTCAGAT +
Preference number: 4 (lower is better)
Translates to: PPDTVGLELANGSYSLTKFPSPS*WNETSD
Trigger: ATCTGACGTTTCATTCCAGCAAGAGGGGCTGGGGAA...CTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTCTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp AGAAAGCAACCCTGTGGCCCTGTTGACCACCTAGTCCGGGAGAGTGTGGAGGTATTTTCTTGTCATTCATaGTTATTCCTTGGACCCTCA +
Preference number: 4 (lower is better)
Translates to: RKQPCGPVDHLVRESVEVFSCHS*LFLGPS
Trigger: TGAGGGTCCAAGGAATAAGCATGAATGACAAGAAAA...TACCTCCACACTCTCCCGGACTAGGTGGTCAACAGGGCCACAGGGTTGCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGTATAGCCAGCATCTTTaGAATTCAAACGACCTCCGC +
Preference number: 4 (lower is better)
Translates to: WLGLIRVLRVGDPGKRCLYSQHL*NSNDLR
Trigger: GCGGAGGTCGTTTGAATTCCAAAGATGCTGGCTATA...CAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp AGGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTATAGCCAGCATCTTTaGAATTCAAACGACCTCCGC +
Preference number: 4 (lower is better)
Translates to: RMVGIDKSAQGWGSGKEMYSQHL*NSNDLR
Trigger: GCGGAGGTCGTTTGAATTCCAAAGATGCTGGCTATA...CATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp GCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTCTTGCTTCGGCCGGACAATCTTCTGGTTaGGTTCGGGGGCGTAAACAA +
Preference number: 4 (lower is better)
Translates to: ATCLQSFSFVLGAVLASAGQSSG*VRGRKQ
Trigger: TTGTTTACGCCCCCGAACCCAACCAGAAGATTGTCC...GGCCGAAGCAAGAACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp CCACCAGACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGGGACAATCTTCTGGTTaGGTTCGGGGGCGTAAACAA +
Preference number: 4 (lower is better)
Translates to: PPDTVGLELANGSYSLTKGQSSG*VRGRKQ
Trigger: TTGTTTACGCCCCCGAACCCAACCAGAAGATTGTCC...CTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTCTGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp AGGACTTACCAGCTTTCTGAACACTGCGCATCATGGGAGGGTGAAGAGGAAAAGGCAGTCCAAGTTGTGTaGATACTTCTCAGGAAACCC +
Preference number: 4 (lower is better)
Translates to: RTYQLSEHCASWEGEEEKAVQVV*ILLRKP
Trigger: GGGTTTCCTGAGAAGTATCCACACAACTTGGACTGC...CTTTTCCTCTTCACCCTCCCATGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGAGTTCAGAGGGTGTTTTaGTCCCACAGTACTTGCCAA +
Preference number: 4 (lower is better)
Translates to: LGLIRVLRVGDPGKRCLRVQRVF*SHSTCQ
Trigger: TTGGCAAGTACTGTGGGACCAAAACACCCTCTGAAC...TCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp TGTTTAGATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGGAGATACTCCTTGTTaGAATCCAAGTTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: CLDGTSSVSTPCTTLSLPGDTPC*NPSWGS
Trigger: GGACCCCCAACTTGGATTCCAACAAGGAGTATCTCC...AGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCATCTAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CCA 90 bp CCACCAGACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGAAGCGCAGGTCCACCTaGAGATACTCCTTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: PPDTVGLELANGSYSLTKKRRST*RYSLLE
Trigger: TTCCAACAAGGAGTATCTCCAGGTGGACCTGCGCTT...CTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTCTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TTTCCAGCACACAGGCAATCCTTAGGCGTTAATATGAAATCAAGATTTGGATCTCCAGGCGGGCTGCACTaGGGCTCCAGAGGTATTCCT +
Preference number: 4 (lower is better)
Translates to: FPAHRQSLGVNMKSRFGSPGGLH*GSRGIP
Trigger: AGGAATACCTCTGGAGCCCCAGTGCAGCCCGCCTGG...AGATCCAAATCTTGATTTCATATTAACGCCTAAGGATTGCCTGTGTGCTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TACCCCAGGAGAAGTAACATAAGAGTTAAAGGGGCCCTCTCTGAACACTCACCCCACCTTTCACTGTCTTaGGTGTTCCCAGATCTACCT +
Preference number: 4 (lower is better)
Translates to: YPRRSNIRVKGALSEHSPHLSLS*VFPDLP
Trigger: AGGTAGATCTGGGAACACCCAAGACAGTGAAAGGTG...GGGTGAGTGTTCAGAGAGGGCCCCTTTAACTCTTATGTTACTTCTCCTGGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp ACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGGTAACCACCTTTCACTGTCTTaGGTGTTCCCAGATCTACCT +
Preference number: 4 (lower is better)
Translates to: TSSVSTPCTTLSLPVEGNHLSLS*VFPDLP
Trigger: AGGTAGATCTGGGAACACCCAAGACAGTGAAAGGTG...GTTACCCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CCA 90 bp GGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCTCAACTTTGGCTGCTGGGTCCTaGGGTCCTGAATGTATTCCC +
Preference number: 4 (lower is better)
Translates to: GFQELDDDCLDGTSSVSTLAAGS*GPECIP
Trigger: GGGAATACATTCAGGACCCCAGGACCCAGCAGCCAA...AGTTGAGACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CCA 90 bp GTCCAGGCGCTTCTATGGATTTTGACGTGTGAAGTTTCCTTTCCAGTTTGTTTTCTTCGCTCTTCACAGTaGGTCCCAGCGTCTCTACCG +
Preference number: 4 (lower is better)
Translates to: VQALLWILTCEVSFPVCFLRSSQ*VPASLP
Trigger: CGGTAGAGACGCTGGGACCCACTGTGAAGAGCGAAG...AAAACAAACTGGAAAGGAAACTTCACACGTCAAAATCCATAGAAGCGCCTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TGTTATCTTGACATTTCAAAGACACCAGAAGACAAGGGGGTCTTGTTTGAGTGTTGGCCTCCTCTTCGGTaGGGTAGGGGGTGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: CYLDISKTPEDKGVLFECWPPLR*GRGWLS
Trigger: AGACAACCACCCCCTACCCCACCGAAGAGGAGGCCA...ACACTCAAACAAGACCCCCTTGTCTTCTGGTGTCTTTGAAATGTCAAGATAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CCA 90 bp TGGATCTTGATGCGAACAATCTTATCCTTCACACAGTTTCATTCTATTCCTGATCGGCCGCCCGTGGCCTaGTACTGGAACTCCATGCAC +
Preference number: 4 (lower is better)
Translates to: WILMRTILSFTQFHSIPDRPPVA*YWNSMH
Trigger: GTGCATGGAGTTCCAGTACCAGGCCACGGGCGGCCG...ATCAGGAATAGAATGAAACTGTGTGAAGGATAAGATTGTTCGCATCAAGATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TTTCCAGCACACAGGCAATCCTTAGGCGTTAATATGAAATCAAGATTTGGATCTTTCCACTCGCCGCCCTaGTCCTCACGGATGACCCAC +
Preference number: 4 (lower is better)
Translates to: FPAHRQSLGVNMKSRFGSFHSPP*SSRMTH
Trigger: GTGGGTCATCCGTGAGGACCAGGGCGGCGAGTGGAA...AGATCCAAATCTTGATTTCATATTAACGCCTAAGGATTGCCTGTGTGCTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp AGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCAAGATGCAGCATTATCCGAATGTCATCAATaGCAATCTCTCCGGAACGTC +
Preference number: 4 (lower is better)
Translates to: SCGVLGGGSLRIVQDAALSECHQ*QSLRNV
Trigger: GACGTTCCGGAGAGATTGCCATTGATGACATTCGGA...TAATGCTGCATCTTGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp AGGACTTACCAGCTTTCTGAACACTGCGCATCATGGGAGGGTGAAGAGGAAAAGTCCGAATGTCATCAATaGCAATCTCTCCGGAACGTC +
Preference number: 4 (lower is better)
Translates to: RTYQLSEHCASWEGEEEKSECHQ*QSLRNV
Trigger: GACGTTCCGGAGAGATTGCCATTGATGACATTCGGA...CTTTTCCTCTTCACCCTCCCATGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CATTCACCCTTCCCCTTTCACCTGGGTATAAGACAAATGAAATCGTGGGTGACCCTGCAAAAGCCGAGATaGGTTCCATGCAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: HSPFPFHLGIRQMKSWVTLQKPR*VPCSSP
Trigger: TGGAGAACTGCATGGAACCCATCTCGGCTTTTGCAG...GGTCACCCACGATTTCATTTGTCTTATACCCAGGTGAAAGGGGAAGGGTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp AGGAGAAGTAACATAAGAGTTAAAGGGGCCCTCTCTGAACACTCACCCCTCGCCCTTTCTCGTTTGTTTTaGGTGCTGTTCTTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: RRSNIRVKGALSEHSPLALSRLF*VLFLLR
Trigger: CCGAAGCAAGAACAGCACCCAAAACAAACGAGAAAG...GGCGAGGGGTGAGTGTTCAGAGAGGGCCCCTTTAACTCTTATGTTACTTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp TGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGCTTTCTCGTTTGTTTTaGGTGCTGTTCTTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: WLGLIRVLRVGDPGKRCLLSRLF*VLFLLR
Trigger: CCGAAGCAAGAACAGCACCCAAAACAAACGAGAAAG...CAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp AGAAGTAACATAAGAGTTAAAGGGGCCCTCTCTGAACACTCACCCCTCGCCCAAATATTAGTCATCACATaGTACCCTGGGCTGATCCCC +
Preference number: 4 (lower is better)
Translates to: RSNIRVKGALSEHSPLAQILVIT*YPGLIP
Trigger: GGGGATCAGCCCAGGGTACCATGTGATGACTAATAT...TTGGGCGAGGGGTGAGTGTTCAGAGAGGGCCCCTTTAACTCTTATGTTACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CCA 90 bp GAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAGAACTGTAAAATGGCTCACTCCTCCTGAGTCCTGGTaGCTTGTCTTCACCTCTATT +
Preference number: 4 (lower is better)
Translates to: EVQVRNRARLWRTVKWLTPPESW*LVFTSI
Trigger: AATAGAGGTGAAGACAAGCCACCAGGACTCAGGAGG...AGTGAGCCATTTTACAGTTCTCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CCACCAGACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGCCATTTTGGAGAAGGTaGCTCTTTCCAGAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: PPDTVGLELANGSYSLTKPFWRR*LFPELG
Trigger: ACCCAGCTCTGGAAAGAGCCACCTTCTCCAAAATGG...CTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTCTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CAAGGAGATGGGTCAGCTAGCCTACCCACAGATAAAGATAACAAACACACCAAGTGTAGTTCTCCAGTGTaGTGCAGCTTCGGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: QGDGSASLPTDKDNKHTKCSSPV*CSFGSS
Trigger: TGAGCTCCCGAAGCTGCACCACACTGGAGAACTACA...CTTGGTGTGTTTGTTATCTTTATCTGTGGGTAGGCTAGCTGACCCATCTCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GTTGTACATAACTTAGAGGTGAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGACCCAGCCCCTCTTGCTaGAATGAAACGTCAGATAGG +
Preference number: 4 (lower is better)
Translates to: VVHNLEVKCRSETGLDFGPSPSC*NETSDR
Trigger: CCTATCTGACGTTTCATTCCAGCAAGAGGGGCTGGG...TCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTCACCTCTAAGTTATGTACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GTGCCGAGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACCCACAGCAGCAAAAATaGTCTGACAATGATATGCAA +
Preference number: 4 (lower is better)
Translates to: VPSAKISCDTRTLGQSHNPQQQK*SDNDMQ
Trigger: TTGCATATCATTGTCAGACCATTTTTGCTGCTGTGG...GTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACTCGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GTTGTACATAACTTAGAGGTGAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAATCTTGCTTCTACTGTaGGCCGAACTCAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: VVHNLEVKCRSETGLDFGILLLL*AELRRS
Trigger: GCTCCTCCTGAGTTCGGCCCACAGTAGAAGCAAGAT...TCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTCACCTCTAAGTTATGTACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CATTCACCCTTCCCCTTTCACCTGGGTATAAGACAAATGAAATCGTGGGTGACCGAACACTGCGCATCATaGGAGGGTGAAGAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: HSPFPFHLGIRQMKSWVTEHCAS*EGEEEK
Trigger: CTTTTCCTCTTCACCCTCCCATGATGCGCAGTGTTC...GGTCACCCACGATTTCATTTGTCTTATACCCAGGTGAAAGGGGAAGGGTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GCAGGACTCATTCCTTTAATAGGATCAGCAGTGAGTTGGGGTACTTGGGAATGGGAACACTGCGCATCATaGGAGGGTGAAGAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: AGLIPLIGSAVSWGTWEWEHCAS*EGEEEK
Trigger: CTTTTCCTCTTCACCCTCCCATGATGCGCAGTGTTC...CCATTCCCAAGTACCCCAACTCACTGCTGATCCTATTAAAGGAATGAGTCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR CAA 72 bp CTTGACATTTCAAAGACACCAGAAGACAAGGGGGTCTaGTTTGAGTGTGCTAGGGGAACCTTCTCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: LDISKTPEDKGV*FECARGTFSWV
Trigger: GACCCAAGAGAAGGTTCCCCTAGCACACTCAAACAAGACCCCCTTGTCTTCTGGTGTCTTTGAAATGTCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR CAA 72 bp CATCTGAATATGCCAGGCCAGCCTACAAGGGTCTATTaGCCAGATGCCATGAATGTTTTAAGGGGCAGCACA +
Preference number: 4 (lower is better)
Translates to: HLNMPGQPTRVY*PDAMNVLRGST
Trigger: TGTGCTGCCCCTTAAAACATTCATGGCATCTGGCAAATAGACCCTTGTAGGCTGGCCTGGCATATTCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR CAA 72 bp CATTCCTTTAATAGGATCAGCAGTGAGTTGGGGTACTaGGGAATGGAGCCATCGGGGTTAGGGAAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: HSFNRISSELGY*GMEPSGLGKEE
Trigger: TTCCTCTTTCCCTAACCCCGATGGCTCCATTCCCAAGTACCCCAACTCACTGCTGATCCTATTAAAGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp TTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCTCAACTCCCTCAGGAACTGCAGGATaGTCTCCATCTTGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: FQELDDDCLDGTSSVSTPSGTAG*SPSWVW
Trigger: CCAAACCCAAGATGGAGATCATCCTGCAGTTCCTGA...GGGAGTTGAGACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR TCA 90 bp GTCCAGGCGCTTCTATGGATTTTGACGTGTGAAGTTTCCTTTCCAGTTTGTTTTGAGGATCCCCGTCGATaGACGAAGTTCAGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: VQALLWILTCEVSFPVCFEDPRR*TKFRGC
Trigger: ACACCCTCTGAACTTCGTTCATCGACGGGGATCCTC...AAAACAAACTGGAAAGGAAACTTCACACGTCAAAATCCATAGAAGCGCCTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGCATCGTTGTTGGCTTaGAATACCTTGTGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: DGTSSVSTPCTTLSLPVEASLLA*NTLWFL
Trigger: CAAAAACCACAAGGTATTTCAAGCCAACAACGATGC...CTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR TCA 90 bp CCACCAGACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGAATCGAAGTTGCAATTaGATCCCGAAGGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PPDTVGLELANGSYSLTKNRSCN*IPKGAA
Trigger: TGCAGCTCCCTTCGGGATTCAATTGCAACTTCGATT...CTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTCTGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp CAAAGACACCAGAAGACAAGGGGGTCTTGTTTGAGTGTGCTAGGGGAACCTTCTGTTCTTTCGGGAGGATaGAACGAACCAGATGAGAAA +
Preference number: 4 (lower is better)
Translates to: QRHQKTRGSCLSVLGEPSVLSGG*NEPDEK
Trigger: TTTCTCATCTGGTTCGTTTCATCCTCCCGAAAGAAC...AGAAGGTTCCCCTAGCACACTCAAACAAGACCCCCTTGTCTTCTGGTGTCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR TCA 90 bp GGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCAGAATTTTGCTTTTTaGAGCTGCGAAGCATGGCAT +
Preference number: 4 (lower is better)
Translates to: GWLGLIRVLRVGDPGKRCQNFAF*SCEAWH
Trigger: ATGCCATGCTTCGCAGCTTCAAAAAGCAAAATTCTG...ACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR TCA 90 bp TGTTTTATTGGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCACTCAGAGGCGTAAACTaGCACACATCCCGCGGCACC +
Preference number: 4 (lower is better)
Translates to: CFIGFQELDDDCLDGTSSLRGVN*HTSRGT
Trigger: GGTGCCGCGGGATGTGTGTCAGTTTACGCCTCTGAG...TGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCCAATAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR TCA 90 bp AAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTGTGACCCCAAAGAGATaGGCTCCTGTTTTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: KLTFFCRLLLEIPRTYQLVTPKR*APVLSQ
Trigger: CTGGGACAAAACAGGAGCTCATCTCTTTGGGGTCAC...AAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GCAGGACTCATTCCTTTAATAGGATCAGCAGTGAGTTGGGGTACTTGGGAATGGCCTGATGCCTCCCTTTaGAGAGTAGTTGAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: AGLIPLIGSAVSWGTWEWPDASL*RVVESH
Trigger: ATGACTCTCAACTACTCTTCAAAGGGAGGCATCAGG...CCATTCCCAAGTACCCCAACTCACTGCTGATCCTATTAAAGGAATGAGTCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp TGCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTTTTGCCCAGGAGGTCTaGGGATTCACTGTCCCCATC +
Preference number: 4 (lower is better)
Translates to: CKIEATCLQSFSFVLGAVFAQEV*GFTVPI
Trigger: GATGGGGACAGTGAATCCGCAGACCTCCTGGGCAAA...AACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp GATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGAGTTCACACTCAAAGATCAGGAACTaGAGGATGATCTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: DKSAQGWGSGKEMSESSHSKIRN*RMISIL
Trigger: CAAGATGGAGATCATCCTGCAGTTCCTGATCTTTGA...GTGTGAACTCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp GAATCATCAGGGTATATGGTAACTCAGCTGGTCACTACACTGGCTGTATTTTCCTGGTCCCACAGTACTTaGCAATCAGGGGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: ESSGYMVTQLVTTLAVFSWSHST*QSGGQH
Trigger: ATGTTGGCCCCCTGATTGGCAAGTACTGTGGGACCA...GGAAAATACAGCCAGTGTAGTGACCAGCTGAGTTACCATATACCCTGATGATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR GCA 90 bp GGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCTCAACTTGGTCCCACAGTACTTaGCAATCAGGGGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: GFQELDDDCLDGTSSVSTWSHST*QSGGQH
Trigger: ATGTTGGCCCCCTGATTGGCAAGTACTGTGGGACCA...AGTTGAGACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR GCA 90 bp TGCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTAATCGCTCCCTGTGTTaGGATGGCCGTGAGCATGGT +
Preference number: 4 (lower is better)
Translates to: CKIEATCLQSFSFVLGAVNRSLC*DGREHG
Trigger: ACCATGCTCACGGCCATCGCAACACAGGGAGCGATT...AACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp CCAGAAACCAAAATGAACCCAAGGAGGATGGTTGGGATTGATAAGAGTGCTCAGTTGTGGTTTTTGCCATaGCGGTACACCATCCAGTCC +
Preference number: 4 (lower is better)
Translates to: PETKMNPRRMVGIDKSAQLWFLP*RYTIQS
Trigger: GGACTGGATGGTGTACCGGCATGGCAAAAACCACAA...CTGAGCACTCTTATCAATCCCAACCATCCTCCTTGGGTTCATTTTGGTTTCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp GCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTCTTGCTTCGGCCATACCTTGTGGTTTTTaGCATGCCGGTACACCATCC +
Preference number: 4 (lower is better)
Translates to: ATCLQSFSFVLGAVLASAIPCGF*HAGTPS
Trigger: GGATGGTGTACCGGCATGGCAAAAACCACAAGGTAT...GGCCGAAGCAAGAACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp AGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTCTGAACACTGCGCATCAATACCTTGTGGTTTTTaGCATGCCGGTACACCATCC +
Preference number: 4 (lower is better)
Translates to: RLLLEIPRTYQLSEHCASIPCGF*HAGTPS
Trigger: GGATGGTGTACCGGCATGGCAAAAACCACAAGGTAT...TGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp TTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGACAGAACCACCTCAGTTaGATCGTTGTTGGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: LGLIRVLRVGDPGKRCLRQNHLS*IVVGLK
Trigger: TTTCAAGCCAACAACGATGCAACTGAGGTGGTTCTG...TCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp CCAGAAACCAAAATGAACCCAAGGAGGATGGTTGGGATTGATAAGAGTGCTCAGGAACTTGCGCACAAATaGTCTGGCTTCCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: PETKMNPRRMVGIDKSAQELAHK*SGFHSS
Trigger: ACTGCTGTGGAAGCCAGAGCATTTGTGCGCAAGTTC...CTGAGCACTCTTATCAATCCCAACCATCCTCCTTGGGTTCATTTTGGTTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp GTGCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTACCCGCACATACTGTaGCGGAATGGGGTCAAACCT +
Preference number: 4 (lower is better)
Translates to: VQNRGNMFAVFLVCFGCCYPHIL*RNGVKP
Trigger: AGGTTTGACCCCATTCCGGCACAGTATGTGCGGGTA...ACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp TCAAGTTCCCGTGATCTGGCTCAGCCAGTGAATGGTCGAATACCTCTAACTGCACCAGTGGGACATCAGTaGTTATCCGAATGTCATCAA +
Preference number: 4 (lower is better)
Translates to: SSSRDLAQPVNGRIPLTAPVGHQ*LSECHQ
Trigger: TTGATGACATTCGGATAAGCACTGATGTCCCACTGG...TGCAGTTAGAGGTATTCGACCATTCACTGGCTGAGCCAGATCACGGGAACTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GTGCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTCCGAGATGGGTTCCATaGAGTTCTCCAGTGGGACAT +
Preference number: 4 (lower is better)
Translates to: VQNRGNMFAVFLVCFGCCPRWVP*SSPVGH
Trigger: ATGTCCCACTGGAGAACTGCATGGAACCCATCTCGG...ACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp TGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGTCGGATAGTCCAAGATaGAGCATTAGAGTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: WLGLIRVLRVGDPGKRCLSDSPR*SIRVGF
Trigger: AAACCCAACTCTAATGCTGCATCTTGGACTATCCGA...CAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp AGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACACCACCTCTGCCTCTTTGAGTTaGTCACAGACCAAAGAAATA +
Preference number: 4 (lower is better)
Translates to: SAKISCDTRTLGQSHNTTSASLS*SQTKEI
Trigger: TATTTCTTTGGTCTGTGAGCAACTCAAAGAGGCAGA...GGTGGTGTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp TCAAGTTCCCGTGATCTGGCTCAGCCAGTGAATGGTCGAATACCTCTAACTGCAAATATCACACAATGCTaGTTCCAGGGGCTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: SSSRDLAQPVNGRIPLTANITQC*FQGLRD
Trigger: GTCTCTAAGCCCCTGGAAGCAGCATTGTGTGATATT...TGCAGTTAGAGGTATTCGACCATTCACTGGCTGAGCCAGATCACGGGAACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TTCCTATTCAATTCTGGCTTTAATCCCAAAAATGTGGGACAAGGGAAAAGACAAACGACCTCCGCACGGTaGGTCTGGTTGGCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: FLFNSGFNPKNVGQGKRQTTSAR*VWLASH
Trigger: GTGAGAGGCCAACCAGACCCACCGTGCGGAGGTCGT...TTGTCTTTTCCCTTGTCCCACATTTTTGGGATTAAAGCCAGAATTGAATAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CCA 90 bp TGTTTAGATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGCAGTCCAAGTTGTGTaGATACTTCTCAGGAAACCC +
Preference number: 4 (lower is better)
Translates to: CLDGTSSVSTPCTTLSLPAVQVV*ILLRKP
Trigger: GGGTTTCCTGAGAAGTATCCACACAACTTGGACTGC...AGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCATCTAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CCA 90 bp GAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAGAACTGTAAAATGGCTCACTGTTCAGAGGGTGTTTTaGTCCCACAGTACTTGCCAA +
Preference number: 4 (lower is better)
Translates to: EVQVRNRARLWRTVKWLTVQRVF*SHSTCQ
Trigger: TTGGCAAGTACTGTGGGACCAAAACACCCTCTGAAC...AGTGAGCCATTTTACAGTTCTCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTCTTGCTTCGGCCTGTTGGAATCCAAGTTaGGGGTCCAGCCATTGTCAT +
Preference number: 4 (lower is better)
Translates to: ATCLQSFSFVLGAVLASACWNPS*GSSHCH
Trigger: ATGACAATGGCTGGACCCCCAACTTGGATTCCAACA...GGCCGAAGCAAGAACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp CAAGGAGATGGGTCAGCTAGCCTACCCACAGATAAAGATAACAAACACACCAAGGGAGATACTCCTTGTTaGAATCCAAGTTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: QGDGSASLPTDKDNKHTKGDTPC*NPSWGS
Trigger: GGACCCCCAACTTGGATTCCAACAAGGAGTATCTCC...CTTGGTGTGTTTGTTATCTTTATCTGTGGGTAGGCTAGCTGACCCATCTCCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CAAGCGAACCAGTCTCTGGAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTCAGTTGCATCGTTGTTaGCTTGAAATACCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: QANQSLEQNQLSLELWSAQLHRC*LEIPCG
Trigger: ACCACAAGGTATTTCAAGCCAACAACGATGCAACTG...AGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAGAGACTGGTTCGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp CTCAAGGCTGAAGCAGCATGGTTAAGCATTCTTGTCCACAGTACTTGCGGACTTCACCTTTCACTGTCTTaGGTGTTCCCAGATCTACCT +
Preference number: 4 (lower is better)
Translates to: LKAEAAWLSILVHSTCGLHLSLS*VFPDLP
Trigger: AGGTAGATCTGGGAACACCCAAGACAGTGAAAGGTG...AAGTCCGCAAGTACTGTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GTTGTACATAACTTAGAGGTGAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGACATACTGTGCCGGAATaGGGTCAAACCTTCGGATGT +
Preference number: 4 (lower is better)
Translates to: VVHNLEVKCRSETGLDFGHTVPE*GQTFGC
Trigger: ACATCCGAAGGTTTGACCCCATTCCGGCACAGTATG...TCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTCACCTCTAAGTTATGTACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TGCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTTCTCTACCGTGGGCTTaGAGTCTGTCCAGTCACAGC +
Preference number: 4 (lower is better)
Translates to: CKIEATCLQSFSFVLGAVSLPWA*SLSSHS
Trigger: GCTGTGACTGGACAGACTCCAAGCCCACGGTAGAGA...AACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp GAATCATCAGGGTATATGGTAACTCAGCTGGTCACTACACTGGCTGTATTTTCCTGGTCCGGAGCCACTTaGCATGGTCATACATCCAAC +
Preference number: 4 (lower is better)
Translates to: ESSGYMVTQLVTTLAVFSWSGAT*HGHTSN
Trigger: GTTGGATGTATGACCATGCCAAGTGGCTCCGGACCA...GGAAAATACAGCCAGTGTAGTGACCAGCTGAGTTACCATATACCCTGATGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CCA 90 bp TTTCCAGCACACAGGCAATCCTTAGGCGTTAATATGAAATCAAGATTTGGATCTAAACGTCCGGTCGTTTaGGCTGGAGCTGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: FPAHRQSLGVNMKSRFGSKRPVV*AGAAGP
Trigger: TGGGCCAGCAGCTCCAGCCCAAACGACCGGACGTTT...AGATCCAAATCTTGATTTCATATTAACGCCTAAGGATTGCCTGTGTGCTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTCTTGCTTCGGCCGAAATTCCTGTCATCTaGAAACGTCCGGTCGTTTGG +
Preference number: 4 (lower is better)
Translates to: ATCLQSFSFVLGAVLASAEIPVI*KRPVVW
Trigger: CCAAACGACCGGACGTTTCCAGATGACAGGAATTTC...GGCCGAAGCAAGAACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp AGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTCTGAACACTGCGCATCAGAAATTCCTGTCATCTaGAAACGTCCGGTCGTTTGG +
Preference number: 4 (lower is better)
Translates to: RLLLEIPRTYQLSEHCASEIPVI*KRPVVW
Trigger: CCAAACGACCGGACGTTTCCAGATGACAGGAATTTC...TGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GAGAAAGCGGAGAATAATGATCACTGCTCCACTTCTATTCTGGAAAAGTCATTCATGAGCCGGGCATACTaGCCCTCTCTCTGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: EKAENNDHCSTSILEKSFMSRAY*PSLWLS
Trigger: TGACAGCCAGAGAGAGGGCCAGTATGCCCGGCTCAT...GAATGACTTTTCCAGAATAGAAGTGGAGCAGTGATCATTATTCTCCGCTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GTTGTACATAACTTAGAGGTGAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGACATGCAGTTCTCCAGTaGGACATCAGTGCTTATCCG +
Preference number: 4 (lower is better)
Translates to: VVHNLEVKCRSETGLDFGHAVLQ*DISAYP
Trigger: CGGATAAGCACTGATGTCCCACTGGAGAACTGCATG...TCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTCACCTCTAAGTTATGTACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp AGACAGGGTCTTCTTAAAGATCGGCTATCAACTTCAGAAATAGTACTGTATTTCCTGGGATGGGCTGCATaGGCACCGTGTCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: RQGLLKDRLSTSEIVLYFLGWAA*APCPLW
Trigger: CCACAGTGGACACGGTGCCCATGCAGCCCATCCCAG...GAAATACAGTACTATTTCTGAAGTTGATAGCCGATCTTTAAGAAGACCCTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CCA 90 bp CTCTATGGGGCACCTACAGGAATGTCAATCATTTCGCAGGCATGCCTGGCCCCAAAAGCCCTTAATGAGTaGCATATTAGTCATCACATG +
Preference number: 4 (lower is better)
Translates to: LYGAPTGMSIISQACLAPKALNE*HISHHM
Trigger: CATGTGATGACTAATATGCCACTCATTAAGGGCTTT...TGGGGCCAGGCATGCCTGCGAAATGATTGACATTCCTGTAGGTGCCCCATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CCA 90 bp AGGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGAGCTGGTCACTACACTaGCTGTATTTTCCAGACATA +
Preference number: 4 (lower is better)
Translates to: RMVGIDKSAQGWGSGKEMSWSLH*LYFPDI
Trigger: TATGTCTGGAAAATACAGCCAGTGTAGTGACCAGCT...CATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CCA 90 bp CTCAAGGCTGAAGCAGCATGGTTAAGCATTCTTGTCCACAGTACTTGCGGACTTCACCTCTATTCTTGCTaGAATTTCCACCTCACCAGG +
Preference number: 4 (lower is better)
Translates to: LKAEAAWLSILVHSTCGLHLYSC*NFHLTR
Trigger: CCTGGTGAGGTGGAAATTCCAGCAAGAATAGAGGTG...AAGTCCGCAAGTACTGTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CCACCAGACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGGGCTCTTTCCAGAGCTaGGTTCGTAGGTTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: PPDTVGLELANGSYSLTKGSFQS*VRRFLV
Trigger: AACAAGAAACCTACGAACCCAGCTCTGGAAAGAGCC...CTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTCTGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp AGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTCTGAACACTGCGCATCAGGCTCTTTCCAGAGCTaGGTTCGTAGGTTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: RLLLEIPRTYQLSEHCASGSFQS*VRRFLV
Trigger: AACAAGAAACCTACGAACCCAGCTCTGGAAAGAGCC...TGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TGTTTAGATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGGCTCTTTCCAGAGCTaGGTTCGTAGGTTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: CLDGTSSVSTPCTTLSLPGSFQS*VRRFLV
Trigger: AACAAGAAACCTACGAACCCAGCTCTGGAAAGAGCC...AGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCATCTAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CCA 90 bp AAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTGTAGTTCTCCAGTGTaGTGCAGCTTCGGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: KLTFFCRLLLEIPRTYQLCSSPV*CSFGSS
Trigger: TGAGCTCCCGAAGCTGCACCACACTGGAGAACTACA...AAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CTCAAGGCTGAAGCAGCATGGTTAAGCATTCTTGTCCACAGTACTTGCGGACTTTCGGAGCAGCACTTTTaGTGGTTCATCTTGACCTTG +
Preference number: 4 (lower is better)
Translates to: LKAEAAWLSILVHSTCGLSEQHF*WFILTL
Trigger: CAAGGTCAAGATGAACCACCAAAAGTGCTGCTCCGA...AAGTCCGCAAGTACTGTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp AGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTCTGAACACTGCGCATCATCGGAGCAGCACTTTTaGTGGTTCATCTTGACCTTG +
Preference number: 4 (lower is better)
Translates to: RLLLEIPRTYQLSEHCASSEQHF*WFILTL
Trigger: CAAGGTCAAGATGAACCACCAAAAGTGCTGCTCCGA...TGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CTCTGTTCTCCTTCCCGTCCAGTGGTGACCAGTTACAATAACTCGCTGATGGGGATACCTTCGGTATTCTaGATCGGTTTGATCGAGATT +
Preference number: 4 (lower is better)
Translates to: LCSPSRPVVTSYNNSLMGIPSVF*IGLIEI
Trigger: AATCTCGATCAAACCGATCCAGAATACCGAAGGTAT...CCCCATCAGCGAGTTATTGTAACTGGTCACCACTGGACGGGAAGGAGAACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GTGCCGAGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACTCTAGAATTAGCGAATaGCTCCTATTCACTCACAAA +
Preference number: 4 (lower is better)
Translates to: VPSAKISCDTRTLGQSHNSRISE*LLFTHK
Trigger: TTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGA...GTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACTCGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GCAGGACTCATTCCTTTAATAGGATCAGCAGTGAGTTGGGGTACTTGGGAATGGTACACTGCTCAGCCTTaGCCCTCATATGATCACAGA +
Preference number: 4 (lower is better)
Translates to: AGLIPLIGSAVSWGTWEWYTAQP*PSYDHR
Trigger: TCTGTGATCATATGAGGGCCAAGGCTGAGCAGTGTA...CCATTCCCAAGTACCCCAACTCACTGCTGATCCTATTAAAGGAATGAGTCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CTCTGTTCTCCTTCCCGTCCAGTGGTGACCAGTTACAATAACTCGCTGATGGGGAATAAAAACATAAATTaGTGTGCATGCGTGCGTGCG +
Preference number: 4 (lower is better)
Translates to: LCSPSRPVVTSYNNSLMGNKNIN*CACVRA
Trigger: CGCACGCACGCATGCACACCAATTTATGTTTTTATT...CCCCATCAGCGAGTTATTGTAACTGGTCACCACTGGACGGGAAGGAGAACAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CCACCAGACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGTCAGGACCCCTGGAGTaGCTTTCAAACTTACCTTCT +
Preference number: 4 (lower is better)
Translates to: PPDTVGLELANGSYSLTKSGPLE*LSNLPS
Trigger: AGAAGGTAAGTTTGAAAGCCACTCCAGGGGTCCTGA...CTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTCTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp AGGACTTACCAGCTTTCTGAACACTGCGCATCATGGGAGGGTGAAGAGGAAAAGTGGAGAACTGTAAAATaGCTCACTGAGCATGACAGC +
Preference number: 4 (lower is better)
Translates to: RTYQLSEHCASWEGEEEKWRTVK*LTEHDS
Trigger: GCTGTCATGCTCAGTGAGCCATTTTACAGTTCTCCA...CTTTTCCTCTTCACCCTCCCATGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CTCAAGGCTGAAGCAGCATGGTTAAGCATTCTTGTCCACAGTACTTGCGGACTTTGGCCAAGTCAAAATTaGGCCCAGCGTCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LKAEAAWLSILVHSTCGLWPSQN*AQRLSF
Trigger: GAAAGAAAGACGCTGGGCCCAATTTTGACTTGGCCA...AAGTCCGCAAGTACTGTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp AGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTCTGAACACTGCGCATCAGATCAATACTGGCAGTaGGGTTTCCCAAAGGGAATG +
Preference number: 4 (lower is better)
Translates to: RLLLEIPRTYQLSEHCASDQYWQ*GFPKGM
Trigger: CATTCCCTTTGGGAAACCCCACTGCCAGTATTGATC...TGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp AGGACTTACCAGCTTTCTGAACACTGCGCATCATGGGAGGGTGAAGAGGAAAAGTTCATGCTTATTCCTTaGACCCTCATCCCTGTCAAC +
Preference number: 4 (lower is better)
Translates to: RTYQLSEHCASWEGEEEKFMLIP*TLIPVN
Trigger: GTTGACAGGGATGAGGGTCCAAGGAATAAGCATGAA...CTTTTCCTCTTCACCCTCCCATGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GTGCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTCAGGAACTGCAGGATaGTCTCCATCTTGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: VQNRGNMFAVFLVCFGCCSGTAG*SPSWVW
Trigger: CCAAACCCAAGATGGAGATCATCCTGCAGTTCCTGA...ACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp CTCAAGGCTGAAGCAGCATGGTTAAGCATTCTTGTCCACAGTACTTGCGGACTTCCAGCTTGTAGGATTTaGCATAGTAGCCATTCTGTG +
Preference number: 4 (lower is better)
Translates to: LKAEAAWLSILVHSTCGLPACRI*HSSHSV
Trigger: CACAGAATGGCTACTATGTCAAATCCTACAAGCTGG...AAGTCCGCAAGTACTGTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp TTTATTGGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCCCTGAGTGCCAGGTCTaGGGGCGGATTCTAACAAAC +
Preference number: 4 (lower is better)
Translates to: FIGFQELDDDCLDGTSSVPECQV*GRILTN
Trigger: GTTTGTTAGAATCCGCCCTCAGACCTGGCACTCAGG...GACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCCAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR TCA 90 bp TTTCCAGCACACAGGCAATCCTTAGGCGTTAATATGAAATCAAGATTTGGATCTTCTGGGAGTCTGCAATaGGGCCTGAGAGCATCCCCA +
Preference number: 4 (lower is better)
Translates to: FPAHRQSLGVNMKSRFGSSGSLQ*GLRASP
Trigger: TGGGGATGCTCTCAGGCCTCATTGCAGACTCCCAGA...AGATCCAAATCTTGATTTCATATTAACGCCTAAGGATTGCCTGTGTGCTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCTCAACTGGCTGTAGGAGACTTTaGACTTGCGCACAAATGCTC +
Preference number: 4 (lower is better)
Translates to: GFQELDDDCLDGTSSVSTGCRRL*TCAQML
Trigger: GAGCATTTGTGCGCAAGTTCAAAGTCTCCTACAGCC...AGTTGAGACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR TCA 90 bp GAATCATCAGGGTATATGGTAACTCAGCTGGTCACTACACTGGCTGTATTTTCCGGGAGGTTTTGTAGGTaGTGGAGTGATCGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: ESSGYMVTQLVTTLAVFSGRFCR*WSDRSS
Trigger: AGAAGACCGATCACTCCATCACCTACAAAACCTCCC...GGAAAATACAGCCAGTGTAGTGACCAGCTGAGTTACCATATACCCTGATGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR TCA 90 bp TGTTATCTTGACATTTCAAAGACACCAGAAGACAAGGGGGTCTTGTTTGAGTGTTGGCAGACTGCCCACTaGGAGGAGGTATGGGATAAG +
Preference number: 4 (lower is better)
Translates to: CYLDISKTPEDKGVLFECWQTAH*EEVWDK
Trigger: CTTATCCCATACCTCCTCTCAGTGGGCAGTCTGCCA...ACACTCAAACAAGACCCCCTTGTCTTCTGGTGTCTTTGAAATGTCAAGATAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR TCA 90 bp AATGTCAATCATTTCGCAGGCATGCCTGGCCCCAAATGCATGACTGGATGTGGACTTAGAGAAGACACATaGGCAGCAATGGTTACATCT +
Preference number: 4 (lower is better)
Translates to: NVNHFAGMPGPKCMTGCGLREDT*AAMVTS
Trigger: AGATGTAACCATTGCTGCTCATGTGTCTTCTCTAAG...TCCACATCCAGTCATGCATTTGGGGCCAGGCATGCCTGCGAAATGATTGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR TCA 90 bp AGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCAAGATGCAGCATTATCCTCAGCTGAAGTGTaGAGGCATTCACAAAGATTA +
Preference number: 4 (lower is better)
Translates to: SCGVLGGGSLRIVQDAALSSAEV*RHSQRL
Trigger: TAATCTTTGTGAATGCCTTCACACTTCAGCTGAGGA...TAATGCTGCATCTTGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR TCA 90 bp AGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGAGTTCACACAGAACATCTCTTTGTCTTCTaGGAAGCAACTCTAAACACA +
Preference number: 4 (lower is better)
Translates to: RVLRVGDPGKRCLRVHTEHLFVF*EATLNT
Trigger: TGTGTTTAGAGTTGCTTCTCAGAAGACAAAGAGATG...TTCTGTGTGAACTCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR TCA 90 bp GAGAAAGCGGAGAATAATGATCACTGCTCCACTTCTATTCTGGAAAAGTCATTCGCCTTGGCCCTCATATaGTCACAGAGGTTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: EKAENNDHCSTSILEKSFALALI*SQRLGF
Trigger: GAAGCCCAACCTCTGTGATCATATGAGGGCCAAGGC...GAATGACTTTTCCAGAATAGAAGTGGAGCAGTGATCATTATTCTCCGCTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GCAGGACTCATTCCTTTAATAGGATCAGCAGTGAGTTGGGGTACTTGGGAATGGCCTTTGAAGAGTAGTTaGGAGTCATCTAGGGCTATG +
Preference number: 4 (lower is better)
Translates to: AGLIPLIGSAVSWGTWEWPLKSS*ESSRAM
Trigger: CATAGCCCTAGATGACTCTCAACTACTCTTCAAAGG...CCATTCCCAAGTACCCCAACTCACTGCTGATCCTATTAAAGGAATGAGTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp AGGACTTACCAGCTTTCTGAACACTGCGCATCATGGGAGGGTGAAGAGGAAAAGTCAAAGATCAGGAACTaGAGGATGATCTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: RTYQLSEHCASWEGEEEKSKIRN*RMISIL
Trigger: CAAGATGGAGATCATCCTGCAGTTCCTGATCTTTGA...CTTTTCCTCTTCACCCTCCCATGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GAGAAAGCGGAGAATAATGATCACTGCTCCACTTCTATTCTGGAAAAGTCATTCAATCGCTCCCTGTGTTaGGATGGCCGTGAGCATGGT +
Preference number: 4 (lower is better)
Translates to: EKAENNDHCSTSILEKSFNRSLC*DGREHG
Trigger: ACCATGCTCACGGCCATCGCAACACAGGGAGCGATT...GAATGACTTTTCCAGAATAGAAGTGGAGCAGTGATCATTATTCTCCGCTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp CCACCAGACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGCAGAACCACCTCAGTTaGATCGTTGTTGGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: PPDTVGLELANGSYSLTKQNHLS*IVVGLK
Trigger: TTTCAAGCCAACAACGATGCAACTGAGGTGGTTCTG...CTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTCTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GCAGGACTCATTCCTTTAATAGGATCAGCAGTGAGTTGGGGTACTTGGGAATGGCCAGTGGGACATCAGTaGTTATCCGAATGTCATCAA +
Preference number: 4 (lower is better)
Translates to: AGLIPLIGSAVSWGTWEWPVGHQ*LSECHQ
Trigger: TTGATGACATTCGGATAAGCACTGATGTCCCACTGG...CCATTCCCAAGTACCCCAACTCACTGCTGATCCTATTAAAGGAATGAGTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GAGTGGCTTTCAAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGAATTAAAACCAAGACTTaGCTTGGGCATCACACGGCC +
Preference number: 4 (lower is better)
Translates to: EWLSNLPSSAGYFWKSLGIKTKT*LGHHTA
Trigger: GGCCGTGTGATGCCCAAGGCAAGTCTTGGTTTTAAT...TCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GCAGGACTCATTCCTTTAATAGGATCAGCAGTGAGTTGGGGTACTTGGGAATGGCTTCACCTCTATTCTTaGTGGAATTTCCACCTCACC +
Preference number: 4 (lower is better)
Translates to: AGLIPLIGSAVSWGTWEWLHLYS*WNFHLT
Trigger: GGTGAGGTGGAAATTCCAGCAAGAATAGAGGTGAAG...CCATTCCCAAGTACCCCAACTCACTGCTGATCCTATTAAAGGAATGAGTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp CTCAAGGCTGAAGCAGCATGGTTAAGCATTCTTGTCCACAGTACTTGCGGACTTCTTCACCTCTATTCTTaGTGGAATTTCCACCTCACC +
Preference number: 4 (lower is better)
Translates to: LKAEAAWLSILVHSTCGLLHLYS*WNFHLT
Trigger: GGTGAGGTGGAAATTCCAGCAAGAATAGAGGTGAAG...AAGTCCGCAAGTACTGTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAGAACTGTAAAATGGCTCACTGAGAATATCACACAATaGTGCTTCCAGGGGCTTAGA +
Preference number: 4 (lower is better)
Translates to: EVQVRNRARLWRTVKWLTENITQ*CFQGLR
Trigger: TCTAAGCCCCTGGAAGCAGCATTGTGTGATATTCTC...AGTGAGCCATTTTACAGTTCTCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp CATTCACCCTTCCCCTTTCACCTGGGTATAAGACAAATGAAATCGTGGGTGACCCTTGTCCACAGTACTTaGGGACTTCTGGTTAGAATC +
Preference number: 4 (lower is better)
Translates to: HSPFPFHLGIRQMKSWVTLVHST*GLLVRI
Trigger: GATTCTAACCAGAAGTCCGCAAGTACTGTGGACAAG...GGTCACCCACGATTTCATTTGTCTTATACCCAGGTGAAAGGGGAAGGGTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp AGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTCTGAACACTGCGCATCATATAGCCAGCATCTTTaGAATTCAAACGACCTCCGC +
Preference number: 4 (lower is better)
Translates to: RLLLEIPRTYQLSEHCASYSQHL*NSNDLR
Trigger: GCGGAGGTCGTTTGAATTCCAAAGATGCTGGCTATA...TGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TGTTATCTTGACATTTCAAAGACACCAGAAGACAAGGGGGTCTTGTTTGAGTGTGTCAGCAGTGGAGCGTaGAGCTTGTTCAGAACCACC +
Preference number: 4 (lower is better)
Translates to: CYLDISKTPEDKGVLFECVSSGA*SLFRTT
Trigger: GGTGGTTCTGAACAAGCTCCACGCTCCACTGCTGAC...ACACTCAAACAAGACCCCCTTGTCTTCTGGTGTCTTTGAAATGTCAAGATAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CCA 90 bp TTTATTGGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCGTCAGCAGTGGAGCGTaGAGCTTGTTCAGAACCACC +
Preference number: 4 (lower is better)
Translates to: FIGFQELDDDCLDGTSSVVSSGA*SLFRTT
Trigger: GGTGGTTCTGAACAAGCTCCACGCTCCACTGCTGAC...GACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCCAATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CCA 90 bp GGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCTCAACTAAACCTTGTCAGCAGTaGAGCGTGGAGCTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: GFQELDDDCLDGTSSVSTKPCQQ*SVELVQ
Trigger: CTGAACAAGCTCCACGCTCCACTGCTGACAAGGTTT...AGTTGAGACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CCA 90 bp GAGAAAGCGGAGAATAATGATCACTGCTCCACTTCTATTCTGGAAAAGTCATTCCTCCAGAGGTATTCCTaGGTGGAAGAGGCGGAGATC +
Preference number: 4 (lower is better)
Translates to: EKAENNDHCSTSILEKSFLQRYS*VEEAEI
Trigger: GATCTCCGCCTCTTCCACCCAGGAATACCTCTGGAG...GAATGACTTTTCCAGAATAGAAGTGGAGCAGTGATCATTATTCTCCGCTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TGCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTCGGAGCCACTTGGCATaGTCATACATCCAACCACAG +
Preference number: 4 (lower is better)
Translates to: CKIEATCLQSFSFVLGAVRSHLA*SYIQPQ
Trigger: CTGTGGTTGGATGTATGACCATGCCAAGTGGCTCCG...AACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp TGCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTTGGTCCGGAGCCACTTaGCATGGTCATACATCCAAC +
Preference number: 4 (lower is better)
Translates to: CKIEATCLQSFSFVLGAVWSGAT*HGHTSN
Trigger: GTTGGATGTATGACCATGCCAAGTGGCTCCGGACCA...AACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp GTCCAGGCGCTTCTATGGATTTTGACGTGTGAAGTTTCCTTTCCAGTTTGTTTTTGGTCCGGAGCCACTTaGCATGGTCATACATCCAAC +
Preference number: 4 (lower is better)
Translates to: VQALLWILTCEVSFPVCFWSGAT*HGHTSN
Trigger: GTTGGATGTATGACCATGCCAAGTGGCTCCGGACCA...AAAACAAACTGGAAAGGAAACTTCACACGTCAAAATCCATAGAAGCGCCTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CCAGAAACCAAAATGAACCCAAGGAGGATGGTTGGGATTGATAAGAGTGCTCAGGAAATTCCTGTCATCTaGAAACGTCCGGTCGTTTGG +
Preference number: 4 (lower is better)
Translates to: PETKMNPRRMVGIDKSAQEIPVI*KRPVVW
Trigger: CCAAACGACCGGACGTTTCCAGATGACAGGAATTTC...CTGAGCACTCTTATCAATCCCAACCATCCTCCTTGGGTTCATTTTGGTTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp AGAGCAGTCTCATATTCTCAACTAAGGCATGTACATAAAGATGATGCCACTTGGGTAATACCAGTAGGCTaGGATGGGCTGCATGGGCAC +
Preference number: 4 (lower is better)
Translates to: RAVSYSQLRHVHKDDATWVIPVG*DGLHGH
Trigger: GTGCCCATGCAGCCCATCCCAGCCTACTGGTATTAC...CCAAGTGGCATCATCTTTATGTACATGCCTTAGTTGAGAATATGAGACTGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CCA 90 bp AGAGCAGTCTCATATTCTCAACTAAGGCATGTACATAAAGATGATGCCACTTGGTTCTCTTGGGTCAGGTaGGTTGGGGATAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: RAVSYSQLRHVHKDDATWFSWVR*VGDRDG
Trigger: CCCATCCCTATCCCCAACCCACCTGACCCAAGAGAA...CCAAGTGGCATCATCTTTATGTACATGCCTTAGTTGAGAATATGAGACTGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CCA 90 bp GTGCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTATGCATGACTGGATGTaGACAGCCGAGGTAAAAGCC +
Preference number: 4 (lower is better)
Translates to: VQNRGNMFAVFLVCFGCCMHDWM*TAEVKA
Trigger: GGCTTTTACCTCGGCTGTCCACATCCAGTCATGCAT...ACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CCA 90 bp GGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCTCAACTCCTCCTGAGTCCTGGTaGCTTGTCTTCACCTCTATT +
Preference number: 4 (lower is better)
Translates to: GFQELDDDCLDGTSSVSTPPESW*LVFTSI
Trigger: AATAGAGGTGAAGACAAGCCACCAGGACTCAGGAGG...AGTTGAGACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CCA 90 bp GCAGGACTCATTCCTTTAATAGGATCAGCAGTGAGTTGGGGTACTTGGGAATGGAAGACAATCAGAGGATaGGATAAGCTGGACGGCTTT +
Preference number: 4 (lower is better)
Translates to: AGLIPLIGSAVSWGTWEWKTIRG*DKLDGF
Trigger: AAAGCCGTCCAGCTTATCCCATCCTCTGATTGTCTT...CCATTCCCAAGTACCCCAACTCACTGCTGATCCTATTAAAGGAATGAGTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GTTGTACATAACTTAGAGGTGAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGATCAGGACCCCTGGAGTaGCTTTCAAACTTACCTTCT +
Preference number: 4 (lower is better)
Translates to: VVHNLEVKCRSETGLDFGSGPLE*LSNLPS
Trigger: AGAAGGTAAGTTTGAAAGCCACTCCAGGGGTCCTGA...TCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTCACCTCTAAGTTATGTACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CTCAAGGCTGAAGCAGCATGGTTAAGCATTCTTGTCCACAGTACTTGCGGACTTTGGAGAACTGTAAAATaGCTCACTGAGCATGACAGC +
Preference number: 4 (lower is better)
Translates to: LKAEAAWLSILVHSTCGLWRTVK*LTEHDS
Trigger: GCTGTCATGCTCAGTGAGCCATTTTACAGTTCTCCA...AAGTCCGCAAGTACTGTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CCACCAGACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGTTCATGCTTATTCCTTaGACCCTCATCCCTGTCAAC +
Preference number: 4 (lower is better)
Translates to: PPDTVGLELANGSYSLTKFMLIP*TLIPVN
Trigger: GTTGACAGGGATGAGGGTCCAAGGAATAAGCATGAA...CTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTCTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR CAA 72 bp CCCGTTTCTCCATCTTCAGCTGAGGTAGGACACTTCTaGAAATCTCAAGGTAGCACATGCTCTAGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: PVSPSSAEVGHF*KSQGSTCSSLS
Trigger: TGAAAGGCTAGAGCATGTGCTACCTTGAGATTTCAAGAAGTGTCCTACCTCAGCTGAAGATGGAGAAACGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR TCA 90 bp GCAGGACTCATTCCTTTAATAGGATCAGCAGTGAGTTGGGGTACTTGGGAATGGTTCTCGATTTCAAAGTaGGGGTTGAAGTTGAGGACA +
Preference number: 4 (lower is better)
Translates to: AGLIPLIGSAVSWGTWEWFSISK*GLKLRT
Trigger: TGTCCTCAACTTCAACCCTCACTTTGAAATCGAGAA...CCATTCCCAAGTACCCCAACTCACTGCTGATCCTATTAAAGGAATGAGTCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAGAACTGTAAAATGGCTCACTATCAGAGTAGGTAGATaGGGCACTGATCTGTTCATT +
Preference number: 4 (lower is better)
Translates to: EVQVRNRARLWRTVKWLTIRVGR*GTDLFI
Trigger: AATGAACAGATCAGTGCCTCATCTACCTACTCTGAT...AGTGAGCCATTTTACAGTTCTCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GCAAACCCTGAAAAAGTTAACCTGCTATGTGACAGGTTAACTCTTTCCCTTGTTGTGTTGCGATGGCCGTaGGCATGGTTAAAAAGCGCA +
Preference number: 4 (lower is better)
Translates to: ANPEKVNLLCDRLTLSLVVLRWP*AWLKSA
Trigger: TGCGCTTTTTAACCATGCTCACGGCCATCGCAACAC...AACAAGGGAAAGAGTTAACCTGTCACATAGCAGGTTAACTTTTTCAGGGTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp TTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCTCAACTCCCCCAGCTTGTAGGATTTaGCATAGTAGCCATTCTGTG +
Preference number: 4 (lower is better)
Translates to: FQELDDDCLDGTSSVSTPPACRI*HSSHSV
Trigger: CACAGAATGGCTACTATGTCAAATCCTACAAGCTGG...GGGAGTTGAGACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR TCA 90 bp GCAGGACTCATTCCTTTAATAGGATCAGCAGTGAGTTGGGGTACTTGGGAATGGGCATCGTTGTTGGCTTaGAATACCTTGTGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: AGLIPLIGSAVSWGTWEWASLLA*NTLWFL
Trigger: CAAAAACCACAAGGTATTTCAAGCCAACAACGATGC...CCATTCCCAAGTACCCCAACTCACTGCTGATCCTATTAAAGGAATGAGTCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp CCACCAGACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGGCATCGTTGTTGGCTTaGAATACCTTGTGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: PPDTVGLELANGSYSLTKASLLA*NTLWFL
Trigger: CAAAAACCACAAGGTATTTCAAGCCAACAACGATGC...CTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTCTGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp CCAGAAACCAAAATGAACCCAAGGAGGATGGTTGGGATTGATAAGAGTGCTCAGCGGGAAAGAGATGTCTaGGAGTTCACACAGAAACTA +
Preference number: 4 (lower is better)
Translates to: PETKMNPRRMVGIDKSAQRERDV*EFTQKL
Trigger: TAGTTTCTGTGTGAACTCTCAGACATCTCTTTCCCG...CTGAGCACTCTTATCAATCCCAACCATCCTCCTTGGGTTCATTTTGGTTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp TGCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTCAAACACACACACAATaGACCAGCCGCTCTCTCACA +
Preference number: 4 (lower is better)
Translates to: CKIEATCLQSFSFVLGAVQTHTQ*TSRSLT
Trigger: TGTGAGAGAGCGGCTGGTTCATTGTGTGTGTGTTTG...AACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp GCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTCTTGCTTCGGCCCAGTGGCTGTTATCTTaGCATTTCAAAGACACCAGA +
Preference number: 4 (lower is better)
Translates to: ATCLQSFSFVLGAVLASAQWLLS*HFKDTR
Trigger: TCTGGTGTCTTTGAAATGTCAAGATAACAGCCACTG...GGCCGAAGCAAGAACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR TCA 90 bp GAATCATCAGGGTATATGGTAACTCAGCTGGTCACTACACTGGCTGTATTTTCCATCGTGAAAGAATGCTaGAAGTCTCTCCCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: ESSGYMVTQLVTTLAVFSIVKEC*KSLPSS
Trigger: GCTGCTTGGGAGAGACTTTCAGCATTCTTTCACGAT...GGAAAATACAGCCAGTGTAGTGACCAGCTGAGTTACCATATACCCTGATGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR TCA 90 bp TGGATCTTGATGCGAACAATCTTATCCTTCACACAGTTTCATTCTATTCCTGATCCCCAGGCAGCTGTGTaGTCTCAGAGGCGTAAACTG +
Preference number: 4 (lower is better)
Translates to: WILMRTILSFTQFHSIPDPQAAV*SQRRKL
Trigger: CAGTTTACGCCTCTGAGATCACACAGCTGCCTGGGG...ATCAGGAATAGAATGAAACTGTGTGAAGGATAAGATTGTTCGCATCAAGATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp CTCAAGGCTGAAGCAGCATGGTTAAGCATTCTTGTCCACAGTACTTGCGGACTTCGCTTCTATGGATTTTaGCGTGTGAAGTTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: LKAEAAWLSILVHSTCGLRFYGF*RVKFPF
Trigger: GAAAGGAAACTTCACACGTCAAAATCCATAGAAGCG...AAGTCCGCAAGTACTGTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp CATTCACCCTTCCCCTTTCACCTGGGTATAAGACAAATGAAATCGTGGGTGACCGTTACAATAACTCGCTaGTGGGGAGAACATACCAAT +
Preference number: 4 (lower is better)
Translates to: HSPFPFHLGIRQMKSWVTVTITR*WGEHTN
Trigger: ATTGGTATGTTCTCCCCATCAGCGAGTTATTGTAAC...GGTCACCCACGATTTCATTTGTCTTATACCCAGGTGAAAGGGGAAGGGTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GAGAAAGCGGAGAATAATGATCACTGCTCCACTTCTATTCTGGAAAAGTCATTCCTTCCCGTCCAGTGGTaGCCAGTTACAATAACTCGC +
Preference number: 4 (lower is better)
Translates to: EKAENNDHCSTSILEKSFLPVQW*PVTITR
Trigger: GCGAGTTATTGTAACTGGTCACCACTGGACGGGAAG...GAATGACTTTTCCAGAATAGAAGTGGAGCAGTGATCATTATTCTCCGCTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp AAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTCCACTGAGTCCCACATaGCCATTCACATACACAGTA +
Preference number: 4 (lower is better)
Translates to: KLTFFCRLLLEIPRTYQLPLSPT*PFTYTV
Trigger: TACTGTGTATGTGAATGGTCATGTGGGACTCAGTGG...AAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp TGTTTTATTGGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGGCCAACATGTGGAATaGCATCCCAGATGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: CFIGFQELDDDCLDGTSSGQHVE*HPRCPA
Trigger: GGCTGGACATCTGGGATGGCATTCCACATGTTGGCC...TGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCCAATAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR GCA 90 bp GAGAAAGCGGAGAATAATGATCACTGCTCCACTTCTATTCTGGAAAAGTCATTCTGGTCCCACAGTACTTaGCAATCAGGGGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: EKAENNDHCSTSILEKSFWSHST*QSGGQH
Trigger: ATGTTGGCCCCCTGATTGGCAAGTACTGTGGGACCA...GAATGACTTTTCCAGAATAGAAGTGGAGCAGTGATCATTATTCTCCGCTTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp CCAGAAACCAAAATGAACCCAAGGAGGATGGTTGGGATTGATAAGAGTGCTCAGTGCCCAGAGGAACATTaGACTGAAAGTTCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: PETKMNPRRMVGIDKSAQCPEEH*TESSLV
Trigger: CACTAGAGAACTTTCAGTGCAATGTTCCTCTGGGCA...CTGAGCACTCTTATCAATCCCAACCATCCTCCTTGGGTTCATTTTGGTTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp CAAGGAGATGGGTCAGCTAGCCTACCCACAGATAAAGATAACAAACACACCAAGTGCCCAGAGGAACATTaGACTGAAAGTTCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: QGDGSASLPTDKDNKHTKCPEEH*TESSLV
Trigger: CACTAGAGAACTTTCAGTGCAATGTTCCTCTGGGCA...CTTGGTGTGTTTGTTATCTTTATCTGTGGGTAGGCTAGCTGACCCATCTCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GCAAACCCTGAAAAAGTTAACCTGCTATGTGACAGGTTAACTCTTTCCCTTGTTTACCCGCACATACTGTaGCGGAATGGGGTCAAACCT +
Preference number: 4 (lower is better)
Translates to: ANPEKVNLLCDRLTLSLVYPHIL*RNGVKP
Trigger: AGGTTTGACCCCATTCCGGCACAGTATGTGCGGGTA...AACAAGGGAAAGAGTTAACCTGTCACATAGCAGGTTAACTTTTTCAGGGTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GCAAACCCTGAAAAAGTTAACCTGCTATGTGACAGGTTAACTCTTTCCCTTGTTCTCTGGCTGTCACTCTaGAGCCGCAAGAAATTCCTG +
Preference number: 4 (lower is better)
Translates to: ANPEKVNLLCDRLTLSLVLWLSL*SRKKFL
Trigger: CAGGAATTTCTTGCGGCTGCAGAGTGACAGCCAGAG...AACAAGGGAAAGAGTTAACCTGTCACATAGCAGGTTAACTTTTTCAGGGTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp TTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGATTTAAAATTCTCACCTaGAAAAGCCGAGATGGGTTC +
Preference number: 4 (lower is better)
Translates to: LGLIRVLRVGDPGKRCLRFKILT*KSRDGF
Trigger: GAACCCATCTCGGCTTTTGCAGGTGAGAATTTTAAA...TCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR GCA 90 bp AGAAGTAACATAAGAGTTAAAGGGGCCCTCTCTGAACACTCACCCCTCGCCCAATCGAGGCAACATGTTTaGAGTCTTTCTCGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: RSNIRVKGALSEHSPLAQSRQHV*SLSRLF
Trigger: AAACAAACGAGAAAGACTGCAAACATGTTGCCTCGA...TTGGGCGAGGGGTGAGTGTTCAGAGAGGGCCCCTTTAACTCTTATGTTACTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp TGGATCTTGATGCGAACAATCTTATCCTTCACACAGTTTCATTCTATTCCTGATAGTTCTCCAGTGTGGTaGAGCTTCGGGAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: WILMRTILSFTQFHSIPDSSPVW*SFGSSG
Trigger: GCCTGAGCTCCCGAAGCTGCACCACACTGGAGAACT...ATCAGGAATAGAATGAAACTGTGTGAAGGATAAGATTGTTCGCATCAAGATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GCAAACCCTGAAAAAGTTAACCTGCTATGTGACAGGTTAACTCTTTCCCTTGTTAGGTGCAATCCGTCATaGCTCGGAGCAGCACTTTTG +
Preference number: 4 (lower is better)
Translates to: ANPEKVNLLCDRLTLSLVRCNPS*LGAALL
Trigger: CAAAAGTGCTGCTCCGAGGCATGACGGATTGCACCT...AACAAGGGAAAGAGTTAACCTGTCACATAGCAGGTTAACTTTTTCAGGGTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GTGCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTGCAGTCCAAGTTGTGTaGATACTTCTCAGGAAACCC +
Preference number: 4 (lower is better)
Translates to: VQNRGNMFAVFLVCFGCCAVQVV*ILLRKP
Trigger: GGGTTTCCTGAGAAGTATCCACACAACTTGGACTGC...ACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp AAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTGCAGTCCAAGTTGTGTaGATACTTCTCAGGAAACCC +
Preference number: 4 (lower is better)
Translates to: KLTFFCRLLLEIPRTYQLAVQVV*ILLRKP
Trigger: GGGTTTCCTGAGAAGTATCCACACAACTTGGACTGC...AAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGCACTTTTGTTGGAATCCAAGTTaGGGGTCCAGCCATTGTCAT +
Preference number: 4 (lower is better)
Translates to: DTVGLELANGSYSLTKHFCWNPS*GSSHCH
Trigger: ATGACAATGGCTGGACCCCCAACTTGGATTCCAACA...AAAGTGCTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TGTTTTATTGGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCACTCCAGAGGTATTCCTaGGTGGAAGAGGCGGAGATC +
Preference number: 4 (lower is better)
Translates to: CFIGFQELDDDCLDGTSSLQRYS*VEEAEI
Trigger: GATCTCCGCCTCTTCCACCCAGGAATACCTCTGGAG...TGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCCAATAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CCA 90 bp GAGAAAGCGGAGAATAATGATCACTGCTCCACTTCTATTCTGGAAAAGTCATTCCGGAGCCACTTGGCATaGTCATACATCCAACCACAG +
Preference number: 4 (lower is better)
Translates to: EKAENNDHCSTSILEKSFRSHLA*SYIQPQ
Trigger: CTGTGGTTGGATGTATGACCATGCCAAGTGGCTCCG...GAATGACTTTTCCAGAATAGAAGTGGAGCAGTGATCATTATTCTCCGCTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TCAAGTTCCCGTGATCTGGCTCAGCCAGTGAATGGTCGAATACCTCTAACTGCAGCTCCACTTCTATTCTaGAAAAGTCATTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: SSSRDLAQPVNGRIPLTAAPLLF*KSHSPL
Trigger: AAGAGGAGAATGACTTTTCCAGAATAGAAGTGGAGC...TGCAGTTAGAGGTATTCGACCATTCACTGGCTGAGCCAGATCACGGGAACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GAGAAAGCGGAGAATAATGATCACTGCTCCACTTCTATTCTGGAAAAGTCATTCGCTTGTAGGGTTGGCTaGCAGAACCTACACCACAGT +
Preference number: 4 (lower is better)
Translates to: EKAENNDHCSTSILEKSFACRVG*QNLHHS
Trigger: ACTGTGGTGTAGGTTCTGCCAGCCAACCCTACAAGC...GAATGACTTTTCCAGAATAGAAGTGGAGCAGTGATCATTATTCTCCGCTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TCAAGTTCCCGTGATCTGGCTCAGCCAGTGAATGGTCGAATACCTCTAACTGCAAATAAAAACATAAATTaGTGTGCATGCGTGCGTGCG +
Preference number: 4 (lower is better)
Translates to: SSSRDLAQPVNGRIPLTANKNIN*CACVRA
Trigger: CGCACGCACGCATGCACACCAATTTATGTTTTTATT...TGCAGTTAGAGGTATTCGACCATTCACTGGCTGAGCCAGATCACGGGAACTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CCACCAGACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGAGACAAATGAAATCGTaGGTGACCACAGCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: PPDTVGLELANGSYSLTKRQMKS*VTTAAK
Trigger: TTTTGCTGCTGTGGTCACCCACGATTTCATTTGTCT...CTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTCTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp TTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCTCAACTCCCTTCTCGATTTCAAAGTaGGGGTTGAAGTTGAGGACA +
Preference number: 4 (lower is better)
Translates to: FQELDDDCLDGTSSVSTPFSISK*GLKLRT
Trigger: TGTCCTCAACTTCAACCCTCACTTTGAAATCGAGAA...GGGAGTTGAGACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR TCA 90 bp GCAAACCCTGAAAAAGTTAACCTGCTATGTGACAGGTTAACTCTTTCCCTTGTTTCAGGAACTGCAGGATaGTCTCCATCTTGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: ANPEKVNLLCDRLTLSLVSGTAG*SPSWVW
Trigger: CCAAACCCAAGATGGAGATCATCCTGCAGTTCCTGA...AACAAGGGAAAGAGTTAACCTGTCACATAGCAGGTTAACTTTTTCAGGGTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp TTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCTCAACTCCCATCAGAGTAGGTAGATaGGGCACTGATCTGTTCATT +
Preference number: 4 (lower is better)
Translates to: FQELDDDCLDGTSSVSTPIRVGR*GTDLFI
Trigger: AATGAACAGATCAGTGCCTCATCTACCTACTCTGAT...GGGAGTTGAGACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR TCA 90 bp CCAGAAACCAAAATGAACCCAAGGAGGATGGTTGGGATTGATAAGAGTGCTCAGGCATCGTTGTTGGCTTaGAATACCTTGTGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: PETKMNPRRMVGIDKSAQASLLA*NTLWFL
Trigger: CAAAAACCACAAGGTATTTCAAGCCAACAACGATGC...CTGAGCACTCTTATCAATCCCAACCATCCTCCTTGGGTTCATTTTGGTTTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp GCAAACCCTGAAAAAGTTAACCTGCTATGTGACAGGTTAACTCTTTCCCTTGTTGGCTGTAGGAGACTTTaGACTTGCGCACAAATGCTC +
Preference number: 4 (lower is better)
Translates to: ANPEKVNLLCDRLTLSLVGCRRL*TCAQML
Trigger: GAGCATTTGTGCGCAAGTTCAAAGTCTCCTACAGCC...AACAAGGGAAAGAGTTAACCTGTCACATAGCAGGTTAACTTTTTCAGGGTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GTCCAGGCGCTTCTATGGATTTTGACGTGTGAAGTTTCCTTTCCAGTTTGTTTTAATCGAAGTTGCAATTaGATCCCGAAGGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: VQALLWILTCEVSFPVCFNRSCN*IPKGAA
Trigger: TGCAGCTCCCTTCGGGATTCAATTGCAACTTCGATT...AAAACAAACTGGAAAGGAAACTTCACACGTCAAAATCCATAGAAGCGCCTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GTGCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTCGGGAAAGAGATGTCTaGGAGTTCACACAGAAACTA +
Preference number: 4 (lower is better)
Translates to: VQNRGNMFAVFLVCFGCCRERDV*EFTQKL
Trigger: TAGTTTCTGTGTGAACTCTCAGACATCTCTTTCCCG...ACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp TTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGATTTTATAAGGCAACATaGGACAGATTTGCTTTAGGG +
Preference number: 4 (lower is better)
Translates to: LGLIRVLRVGDPGKRCLRFYKAT*DRFALG
Trigger: CCCTAAAGCAAATCTGTCTCATGTTGCCTTATAAAA...TCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR TCA 90 bp CTCAAGGCTGAAGCAGCATGGTTAAGCATTCTTGTCCACAGTACTTGCGGACTTTATTCTGGATCGGTTTaGTCGAGATTATGGCATTCA +
Preference number: 4 (lower is better)
Translates to: LKAEAAWLSILVHSTCGLYSGSV*SRLWHS
Trigger: TGAATGCCATAATCTCGATCAAACCGATCCAGAATA...AAGTCCGCAAGTACTGTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp CAAGGAGATGGGTCAGCTAGCCTACCCACAGATAAAGATAACAAACACACCAAGAACAAAATAGAACTGTaGCCCCAAAGAGATGAGCTC +
Preference number: 4 (lower is better)
Translates to: QGDGSASLPTDKDNKHTKNKIEL*PQRDEL
Trigger: GAGCTCATCTCTTTGGGGTCACAGTTCTATTTTGTT...CTTGGTGTGTTTGTTATCTTTATCTGTGGGTAGGCTAGCTGACCCATCTCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp CAAGGAGATGGGTCAGCTAGCCTACCCACAGATAAAGATAACAAACACACCAAGCGCTTCTATGGATTTTaGCGTGTGAAGTTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: QGDGSASLPTDKDNKHTKRFYGF*RVKFPF
Trigger: GAAAGGAAACTTCACACGTCAAAATCCATAGAAGCG...CTTGGTGTGTTTGTTATCTTTATCTGTGGGTAGGCTAGCTGACCCATCTCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGCACTTTATTTTCCCCTGCCTCTaGGAATATCACACAATGCTG +
Preference number: 4 (lower is better)
Translates to: DTVGLELANGSYSLTKHFIFPCL*EYHTML
Trigger: CAGCATTGTGTGATATTCTCAGAGGCAGGGGAAAAT...AAAGTGCTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGCACTTTACTCTCCCGAAAGGTTaGAATGGTGTTTGTAACCCA +
Preference number: 4 (lower is better)
Translates to: DTVGLELANGSYSLTKHFTLPKG*NGVCNP
Trigger: TGGGTTACAAACACCATTTCAACCTTTCGGGAGAGT...AAAGTGCTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GCAAACCCTGAAAAAGTTAACCTGCTATGTGACAGGTTAACTCTTTCCCTTGTTCTAAGCCCTTGGGCTTaGCAGCTCTACTTTTCACCT +
Preference number: 4 (lower is better)
Translates to: ANPEKVNLLCDRLTLSLVLSPWA*QLYFSP
Trigger: AGGTGAAAAGTAGAGCTGTCAAGCCCAAGGGCTTAG...AACAAGGGAAAGAGTTAACCTGTCACATAGCAGGTTAACTTTTTCAGGGTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GAGAAAGCGGAGAATAATGATCACTGCTCCACTTCTATTCTGGAAAAGTCATTCGTTTCCCAAAGGGAATaGCTCAAGGAGATGGGTCAG +
Preference number: 4 (lower is better)
Translates to: EKAENNDHCSTSILEKSFVSQRE*LKEMGQ
Trigger: CTGACCCATCTCCTTGAGTCATTCCCTTTGGGAAAC...GAATGACTTTTCCAGAATAGAAGTGGAGCAGTGATCATTATTCTCCGCTTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp TTTCCAGCACACAGGCAATCCTTAGGCGTTAATATGAAATCAAGATTTGGATCTTGTTCCCACAGTGTTTaGCCAGGAGGTCTGCGGATT +
Preference number: 4 (lower is better)
Translates to: FPAHRQSLGVNMKSRFGSCSHSV*PGGLRI
Trigger: AATCCGCAGACCTCCTGGGCAAACACTGTGGGAACA...AGATCCAAATCTTGATTTCATATTAACGCCTAAGGATTGCCTGTGTGCTGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GTGCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTCAGAACCACCTCAGTTaGATCGTTGTTGGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: VQNRGNMFAVFLVCFGCCQNHLS*IVVGLK
Trigger: TTTCAAGCCAACAACGATGCAACTGAGGTGGTTCTG...ACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR GCA 90 bp TTTCCAGCACACAGGCAATCCTTAGGCGTTAATATGAAATCAAGATTTGGATCTCCGAGATGGGTTCCATaGAGTTCTCCAGTGGGACAT +
Preference number: 4 (lower is better)
Translates to: FPAHRQSLGVNMKSRFGSPRWVP*SSPVGH
Trigger: ATGTCCCACTGGAGAACTGCATGGAACCCATCTCGG...AGATCCAAATCTTGATTTCATATTAACGCCTAAGGATTGCCTGTGTGCTGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp AAACAAGCGAACCAGTCTCTGGAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTTCGAGGCAACATGTTTaGAGTCTTTCTCGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: KQANQSLEQNQLSLELWSSRQHV*SLSRLF
Trigger: AAACAAACGAGAAAGACTGCAAACATGTTGCCTCGA...ACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAGAGACTGGTTCGCTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CCA 90 bp GCAAACCCTGAAAAAGTTAACCTGCTATGTGACAGGTTAACTCTTTCCCTTGTTAAGCGCAGGTCCACCTaGAGATACTCCTTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: ANPEKVNLLCDRLTLSLVKRRST*RYSLLE
Trigger: TTCCAACAAGGAGTATCTCCAGGTGGACCTGCGCTT...AACAAGGGAAAGAGTTAACCTGTCACATAGCAGGTTAACTTTTTCAGGGTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TGTTATCTTGACATTTCAAAGACACCAGAAGACAAGGGGGTCTTGTTTGAGTGTAAACCTTGTCAGCAGTaGAGCGTGGAGCTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: CYLDISKTPEDKGVLFECKPCQQ*SVELVQ
Trigger: CTGAACAAGCTCCACGCTCCACTGCTGACAAGGTTT...ACACTCAAACAAGACCCCCTTGTCTTCTGGTGTCTTTGAAATGTCAAGATAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CCA 90 bp GTCCAGGCGCTTCTATGGATTTTGACGTGTGAAGTTTCCTTTCCAGTTTGTTTTTCCGAATGTCATCAATaGCAATCTCTCCGGAACGTC +
Preference number: 4 (lower is better)
Translates to: VQALLWILTCEVSFPVCFSECHQ*QSLRNV
Trigger: GACGTTCCGGAGAGATTGCCATTGATGACATTCGGA...AAAACAAACTGGAAAGGAAACTTCACACGTCAAAATCCATAGAAGCGCCTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CATTCACCCTTCCCCTTTCACCTGGGTATAAGACAAATGAAATCGTGGGTGACCATACCTTCGGTATTCTaGATCGGTTTGATCGAGATT +
Preference number: 4 (lower is better)
Translates to: HSPFPFHLGIRQMKSWVTIPSVF*IGLIEI
Trigger: AATCTCGATCAAACCGATCCAGAATACCGAAGGTAT...GGTCACCCACGATTTCATTTGTCTTATACCCAGGTGAAAGGGGAAGGGTGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGCACTTTGTCCAGGCGCTTCTATaGATTTTGACGTGTGAAGTT +
Preference number: 4 (lower is better)
Translates to: DTVGLELANGSYSLTKHFVQALL*ILTCEV
Trigger: AACTTCACACGTCAAAATCCATAGAAGCGCCTGGAC...AAAGTGCTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp CCACCAGACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGCCACAGCAGCAAAAATaGTCTGACAATGATATGCAA +
Preference number: 4 (lower is better)
Translates to: PPDTVGLELANGSYSLTKPQQQK*SDNDMQ
Trigger: TTGCATATCATTGTCAGACCATTTTTGCTGCTGTGG...CTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTCTGGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp TTCCTATTCAATTCTGGCTTTAATCCCAAAAATGTGGGACAAGGGAAAAGACAAGGTAACCGGGAGAGGTaGTATAGCCAGCATCTTTGG +
Preference number: 4 (lower is better)
Translates to: FLFNSGFNPKNVGQGKRQGNRER*YSQHLW
Trigger: CCAAAGATGCTGGCTATATCACCTCTCCCGGTTACC...TTGTCTTTTCCCTTGTCCCACATTTTTGGGATTAAAGCCAGAATTGAATAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR TCA 90 bp GAATCATCAGGGTATATGGTAACTCAGCTGGTCACTACACTGGCTGTATTTTCCTTCTCGATTTCAAAGTaGGGGTTGAAGTTGAGGACA +
Preference number: 4 (lower is better)
Translates to: ESSGYMVTQLVTTLAVFSFSISK*GLKLRT
Trigger: TGTCCTCAACTTCAACCCTCACTTTGAAATCGAGAA...GGAAAATACAGCCAGTGTAGTGACCAGCTGAGTTACCATATACCCTGATGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR TCA 90 bp GACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGCACTTTTTCTCGATTTCAAAGTaGGGGTTGAAGTTGAGGACA +
Preference number: 4 (lower is better)
Translates to: DTVGLELANGSYSLTKHFFSISK*GLKLRT
Trigger: TGTCCTCAACTTCAACCCTCACTTTGAAATCGAGAA...AAAGTGCTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GTGCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTATCAGAGTAGGTAGATaGGGCACTGATCTGTTCATT +
Preference number: 4 (lower is better)
Translates to: VQNRGNMFAVFLVCFGCCIRVGR*GTDLFI
Trigger: AATGAACAGATCAGTGCCTCATCTACCTACTCTGAT...ACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR TCA 90 bp AGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTCTGAACACTGCGCATCATTGCTTTTCAAGTGTTaGTTAGAAAGAGAAAGCGGA +
Preference number: 4 (lower is better)
Translates to: RLLLEIPRTYQLSEHCASLLFKC*LERESG
Trigger: TCCGCTTTCTCTTTCTAATCAACACTTGAAAAGCAA...TGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp TTTCCAGCACACAGGCAATCCTTAGGCGTTAATATGAAATCAAGATTTGGATCTGACTTACCAGCTTTCTaGACACTGCGCATCATGGGA +
Preference number: 4 (lower is better)
Translates to: FPAHRQSLGVNMKSRFGSDLPAF*TLRIMG
Trigger: TCCCATGATGCGCAGTGTTCAGAAAGCTGGTAAGTC...AGATCCAAATCTTGATTTCATATTAACGCCTAAGGATTGCCTGTGTGCTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GTCCAGGCGCTTCTATGGATTTTGACGTGTGAAGTTTCCTTTCCAGTTTGTTTTCAGAACCACCTCAGTTaGATCGTTGTTGGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: VQALLWILTCEVSFPVCFQNHLS*IVVGLK
Trigger: TTTCAAGCCAACAACGATGCAACTGAGGTGGTTCTG...AAAACAAACTGGAAAGGAAACTTCACACGTCAAAATCCATAGAAGCGCCTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GAATCATCAGGGTATATGGTAACTCAGCTGGTCACTACACTGGCTGTATTTTCCTCGGATAGTCCAAGATaGAGCATTAGAGTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: ESSGYMVTQLVTTLAVFSSDSPR*SIRVGF
Trigger: AAACCCAACTCTAATGCTGCATCTTGGACTATCCGA...GGAAAATACAGCCAGTGTAGTGACCAGCTGAGTTACCATATACCCTGATGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR GCA 90 bp AGACAGGGTCTTCTTAAAGATCGGCTATCAACTTCAGAAATAGTACTGTATTTCTGGGAGAAGCCACACTaGATCCCATGTGGCCTCTAT +
Preference number: 4 (lower is better)
Translates to: RQGLLKDRLSTSEIVLYFWEKPH*IPCGLY
Trigger: ATAGAGGCCACATGGGATGCAGTGTGGCTTCTCCCA...GAAATACAGTACTATTTCTGAAGTTGATAGCCGATCTTTAAGAAGACCCTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR GCA 90 bp GAGAAAGCGGAGAATAATGATCACTGCTCCACTTCTATTCTGGAAAAGTCATTCAACTTAGAGGTGAAGTaGAGGTCCGAAACAGGGCTA +
Preference number: 4 (lower is better)
Translates to: EKAENNDHCSTSILEKSFNLEVK*RSETGL
Trigger: TAGCCCTGTTTCGGACCTGCACTTCACCTCTAAGTT...GAATGACTTTTCCAGAATAGAAGTGGAGCAGTGATCATTATTCTCCGCTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp CATTCACCCTTCCCCTTTCACCTGGGTATAAGACAAATGAAATCGTGGGTGACCTTTTCTTGTCATTCATaGTTATTCCTTGGACCCTCA +
Preference number: 4 (lower is better)
Translates to: HSPFPFHLGIRQMKSWVTFSCHS*LFLGPS
Trigger: TGAGGGTCCAAGGAATAAGCATGAATGACAAGAAAA...GGTCACCCACGATTTCATTTGTCTTATACCCAGGTGAAAGGGGAAGGGTGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TGTTTTATTGGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGGACAATCTTCTGGTTaGGTTCGGGGGCGTAAACAA +
Preference number: 4 (lower is better)
Translates to: CFIGFQELDDDCLDGTSSGQSSG*VRGRKQ
Trigger: TTGTTTACGCCCCCGAACCCAACCAGAAGATTGTCC...TGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCCAATAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CCA 90 bp GCAAACCCTGAAAAAGTTAACCTGCTATGTGACAGGTTAACTCTTTCCCTTGTTTGTTGGAATCCAAGTTaGGGGTCCAGCCATTGTCAT +
Preference number: 4 (lower is better)
Translates to: ANPEKVNLLCDRLTLSLVCWNPS*GSSHCH
Trigger: ATGACAATGGCTGGACCCCCAACTTGGATTCCAACA...AACAAGGGAAAGAGTTAACCTGTCACATAGCAGGTTAACTTTTTCAGGGTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TTTCCAGCACACAGGCAATCCTTAGGCGTTAATATGAAATCAAGATTTGGATCTCATACTGTGCCGGAATaGGGTCAAACCTTCGGATGT +
Preference number: 4 (lower is better)
Translates to: FPAHRQSLGVNMKSRFGSHTVPE*GQTFGC
Trigger: ACATCCGAAGGTTTGACCCCATTCCGGCACAGTATG...AGATCCAAATCTTGATTTCATATTAACGCCTAAGGATTGCCTGTGTGCTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TTTCCAGCACACAGGCAATCCTTAGGCGTTAATATGAAATCAAGATTTGGATCTCTGCAAAAGCCGAGATaGGTTCCATGCAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: FPAHRQSLGVNMKSRFGSLQKPR*VPCSSP
Trigger: TGGAGAACTGCATGGAACCCATCTCGGCTTTTGCAG...AGATCCAAATCTTGATTTCATATTAACGCCTAAGGATTGCCTGTGTGCTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GCAAACCCTGAAAAAGTTAACCTGCTATGTGACAGGTTAACTCTTTCCCTTGTTGAGCAGCACTTTTGGTaGTTCATCTTGACCTTGTGC +
Preference number: 4 (lower is better)
Translates to: ANPEKVNLLCDRLTLSLVEQHFW*FILTLC
Trigger: GCACAAGGTCAAGATGAACCACCAAAAGTGCTGCTC...AACAAGGGAAAGAGTTAACCTGTCACATAGCAGGTTAACTTTTTCAGGGTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GCAAACCCTGAAAAAGTTAACCTGCTATGTGACAGGTTAACTCTTTCCCTTGTTTACACTGCTCAGCCTTaGCCCTCATATGATCACAGA +
Preference number: 4 (lower is better)
Translates to: ANPEKVNLLCDRLTLSLVYTAQP*PSYDHR
Trigger: TCTGTGATCATATGAGGGCCAAGGCTGAGCAGTGTA...AACAAGGGAAAGAGTTAACCTGTCACATAGCAGGTTAACTTTTTCAGGGTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TTTCCAGCACACAGGCAATCCTTAGGCGTTAATATGAAATCAAGATTTGGATCTGGCTCAGCCAGTGAATaGTCGAATACCTCTAACTGC +
Preference number: 4 (lower is better)
Translates to: FPAHRQSLGVNMKSRFGSGSASE*SNTSNC
Trigger: GCAGTTAGAGGTATTCGACCATTCACTGGCTGAGCC...AGATCCAAATCTTGATTTCATATTAACGCCTAAGGATTGCCTGTGTGCTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR CAA 72 bp GAGAAGACACATGAGCAGCAATGGTTACATCTTCATTaGACCTTCTCTGTGATGATGCGGCAACATCTGAAT +
Preference number: 4 (lower is better)
Translates to: EKTHEQQWLHLH*TFSVMMRQHLN
Trigger: ATTCAGATGTTGCCGCATCATCACAGAGAAGGTCAAATGAAGATGTAACCATTGCTGCTCATGTGTCTTCTC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272849.7
3UTR CAA 72 bp TCTGTCCTGTCCATACCTTCGGTATTCTGGATCGGTTaGATCGAGATTATGGCATTCAGTTTCCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: SVLSIPSVFWIG*IEIMAFSFQRK
Trigger: TTTCCTTTGGAAACTGAATGCCATAATCTCGATCAAACCGATCCAGAATACCGAAGGTATGGACAGGACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp AGAGCAGTCTCATATTCTCAACTAAGGCATGTACATAAAGATGATGCCACTTGGTTCTCCATCTTCAGCTaGGGTAGGACACTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: RAVSYSQLRHVHKDDATWFSIFS*GRTLLE
Trigger: TTCAAGAAGTGTCCTACCTCAGCTGAAGATGGAGAA...CCAAGTGGCATCATCTTTATGTACATGCCTTAGTTGAGAATATGAGACTGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR TCA 90 bp GAGAAAGCGGAGAATAATGATCACTGCTCCACTTCTATTCTGGAAAAGTCATTCACTCTCCCGAAAGGTTaGAATGGTGTTTGTAACCCA +
Preference number: 4 (lower is better)
Translates to: EKAENNDHCSTSILEKSFTLPKG*NGVCNP
Trigger: TGGGTTACAAACACCATTTCAACCTTTCGGGAGAGT...GAATGACTTTTCCAGAATAGAAGTGGAGCAGTGATCATTATTCTCCGCTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp AAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTGCTGGGCATACTGGTTaGGTTTCAAATATATTTCCA +
Preference number: 4 (lower is better)
Translates to: KLTFFCRLLLEIPRTYQLAGHTG*VSNIFP
Trigger: TGGAAATATATTTGAAACTCAACCAGTATGCCCAGC...AAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp TTTATTGGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCATTTCAGGAGTTGGATaGCGACTGTTTAGATGGGAC +
Preference number: 4 (lower is better)
Translates to: FIGFQELDDDCLDGTSSVISGVG*RLFRWD
Trigger: GTCCCATCTAAACAGTCGTCATCCAACTCCTGAAAT...GACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCCAATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR GCA 90 bp TGTTATCTTGACATTTCAAAGACACCAGAAGACAAGGGGGTCTTGTTTGAGTGTAACATGAGACAGATTTaGTTTAGGGCTGGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: CYLDISKTPEDKGVLFECNMRQI*FRAGEV
Trigger: CACCTCTCCAGCCCTAAAGCAAATCTGTCTCATGTT...ACACTCAAACAAGACCCCCTTGTCTTCTGGTGTCTTTGAAATGTCAAGATAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR GCA 90 bp TGGATCTTGATGCGAACAATCTTATCCTTCACACAGTTTCATTCTATTCCTGATCAGATAGGATTCAGGTaGAATCCGTCATGCCTCGGA +
Preference number: 4 (lower is better)
Translates to: WILMRTILSFTQFHSIPDQIGFR*NPSCLG
Trigger: TCCGAGGCATGACGGATTGCACCTGAATCCTATCTG...ATCAGGAATAGAATGAAACTGTGTGAAGGATAAGATTGTTCGCATCAAGATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GCAAACCCTGAAAAAGTTAACCTGCTATGTGACAGGTTAACTCTTTCCCTTGTTGTCATTCTCCTCTTCTaGCTCTTTGAGTTGCTCACA +
Preference number: 4 (lower is better)
Translates to: ANPEKVNLLCDRLTLSLVVILLF*LFELLT
Trigger: TGTGAGCAACTCAAAGAGGCAGAAGAGGAGAATGAC...AACAAGGGAAAGAGTTAACCTGTCACATAGCAGGTTAACTTTTTCAGGGTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGCACTTTAAACTTACCTTCTTCTaGAGGCTACTTCTGGAAATC +
Preference number: 4 (lower is better)
Translates to: DTVGLELANGSYSLTKHFKLTFF*RLLLEI
Trigger: GATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTT...AAAGTGCTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp TTTCCAGCACACAGGCAATCCTTAGGCGTTAATATGAAATCAAGATTTGGATCTAACTTAGAGGTGAAGTaGAGGTCCGAAACAGGGCTA +
Preference number: 4 (lower is better)
Translates to: FPAHRQSLGVNMKSRFGSNLEVK*RSETGL
Trigger: TAGCCCTGTTTCGGACCTGCACTTCACCTCTAAGTT...AGATCCAAATCTTGATTTCATATTAACGCCTAAGGATTGCCTGTGTGCTGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TTTATTGGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCTATAGCCAGCATCTTTaGAATTCAAACGACCTCCGC +
Preference number: 4 (lower is better)
Translates to: FIGFQELDDDCLDGTSSVYSQHL*NSNDLR
Trigger: GCGGAGGTCGTTTGAATTCCAAAGATGCTGGCTATA...GACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCCAATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CCA 90 bp TGTTTTATTGGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCATGTTGGAATCCAAGTTaGGGGTCCAGCCATTGTCAT +
Preference number: 4 (lower is better)
Translates to: CFIGFQELDDDCLDGTSSCWNPS*GSSHCH
Trigger: ATGACAATGGCTGGACCCCCAACTTGGATTCCAACA...TGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCCAATAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CCA 90 bp TGGATCTTGATGCGAACAATCTTATCCTTCACACAGTTTCATTCTATTCCTGATAAACCTTGTCAGCAGTaGAGCGTGGAGCTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: WILMRTILSFTQFHSIPDKPCQQ*SVELVQ
Trigger: CTGAACAAGCTCCACGCTCCACTGCTGACAAGGTTT...ATCAGGAATAGAATGAAACTGTGTGAAGGATAAGATTGTTCGCATCAAGATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TGTTTTATTGGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCACACCTCTATTCTTGCTaGAATTTCCACCTCACCAGG +
Preference number: 4 (lower is better)
Translates to: CFIGFQELDDDCLDGTSSHLYSC*NFHLTR
Trigger: CCTGGTGAGGTGGAAATTCCAGCAAGAATAGAGGTG...TGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCCAATAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CCA 90 bp CTCAAGGCTGAAGCAGCATGGTTAAGCATTCTTGTCCACAGTACTTGCGGACTTATAGGCTGGGCATACTaGTTGAGTTTCAAATATATT +
Preference number: 4 (lower is better)
Translates to: LKAEAAWLSILVHSTCGLIGWAY*LSFKYI
Trigger: AATATATTTGAAACTCAACCAGTATGCCCAGCCTAT...AAGTCCGCAAGTACTGTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR CAA 72 bp AGCACTTTAAGCCTCGTCCAGGCGCTTCTATGGATTTaGACGTGTGAAGTTTCCTTTCCAGTTTGTTTTAAA +
Preference number: 4 (lower is better)
Translates to: STLSLVQALLWI*TCEVSFPVCFK
Trigger: TTTAAAACAAACTGGAAAGGAAACTTCACACGTCAAAATCCATAGAAGCGCCTGGACGAGGCTTAAAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR CAA 72 bp AAGCAGCAAAGACACACACACATGAATAAACAGCTGTaGGTTGAACTCTTGCTCTCTGCATACAAAACACTG +
Preference number: 4 (lower is better)
Translates to: KQQRHTHMNKQL*VELLLSAYKTL
Trigger: CAGTGTTTTGTATGCAGAGAGCAAGAGTTCAACCAACAGCTGTTTATTCATGTGTGTGTGTCTTTGCTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp AGACAGGGTCTTCTTAAAGATCGGCTATCAACTTCAGAAATAGTACTGTATTTCAATCGAAGTTGCAATTaGATCCCGAAGGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RQGLLKDRLSTSEIVLYFNRSCN*IPKGAA
Trigger: TGCAGCTCCCTTCGGGATTCAATTGCAACTTCGATT...GAAATACAGTACTATTTCTGAAGTTGATAGCCGATCTTTAAGAAGACCCTGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR TCA 90 bp TGCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTCATATCTGGATATCGTaGAAGAATGCTGAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: CKIEATCLQSFSFVLGAVHIWIS*KNAESL
Trigger: GAGACTTTCAGCATTCTTTCACGATATCCAGATATG...AACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR TCA 90 bp TTCCTATTCAATTCTGGCTTTAATCCCAAAAATGTGGGACAAGGGAAAAGACAATTTCTTAGAAGAGAATaGCCCTTCCCTCCCTCCATG +
Preference number: 4 (lower is better)
Translates to: FLFNSGFNPKNVGQGKRQFLRRE*PFPPSM
Trigger: CATGGAGGGAGGGAAGGGTCATTCTCTTCTAAGAAA...TTGTCTTTTCCCTTGTCCCACATTTTTGGGATTAAAGCCAGAATTGAATAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR TCA 90 bp GTCCAGGCGCTTCTATGGATTTTGACGTGTGAAGTTTCCTTTCCAGTTTGTTTTTATTCTGGATCGGTTTaGTCGAGATTATGGCATTCA +
Preference number: 4 (lower is better)
Translates to: VQALLWILTCEVSFPVCFYSGSV*SRLWHS
Trigger: TGAATGCCATAATCTCGATCAAACCGATCCAGAATA...AAAACAAACTGGAAAGGAAACTTCACACGTCAAAATCCATAGAAGCGCCTGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GAGAAAGCGGAGAATAATGATCACTGCTCCACTTCTATTCTGGAAAAGTCATTCAACAAAATAGAACTGTaGCCCCAAAGAGATGAGCTC +
Preference number: 4 (lower is better)
Translates to: EKAENNDHCSTSILEKSFNKIEL*PQRDEL
Trigger: GAGCTCATCTCTTTGGGGTCACAGTTCTATTTTGTT...GAATGACTTTTCCAGAATAGAAGTGGAGCAGTGATCATTATTCTCCGCTTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp GTCCAGGCGCTTCTATGGATTTTGACGTGTGAAGTTTCCTTTCCAGTTTGTTTTTTTAAAATTCTCACCTaGAAAAGCCGAGATGGGTTC +
Preference number: 4 (lower is better)
Translates to: VQALLWILTCEVSFPVCFFKILT*KSRDGF
Trigger: GAACCCATCTCGGCTTTTGCAGGTGAGAATTTTAAA...AAAACAAACTGGAAAGGAAACTTCACACGTCAAAATCCATAGAAGCGCCTGGAC
41% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000360409.7
CDS-3UTR GCA 90 bp AAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTGAGAATAATGATCACTaGTCCACTTCTATTCTGGAA +
Preference number: 4 (lower is better)
Translates to: KLTFFCRLLLEIPRTYQLENNDH*STSILE
Trigger: TTCCAGAATAGAAGTGGAGCAGTGATCATTATTCTC...AAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp TTTCCAGCACACAGGCAATCCTTAGGCGTTAATATGAAATCAAGATTTGGATCTAATATCACACAATGCTaGTTCCAGGGGCTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: FPAHRQSLGVNMKSRFGSNITQC*FQGLRD
Trigger: GTCTCTAAGCCCCTGGAAGCAGCATTGTGTGATATT...AGATCCAAATCTTGATTTCATATTAACGCCTAAGGATTGCCTGTGTGCTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GCAAACCCTGAAAAAGTTAACCTGCTATGTGACAGGTTAACTCTTTCCCTTGTTCAGTTGCATCGTTGTTaGCTTGAAATACCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: ANPEKVNLLCDRLTLSLVQLHRC*LEIPCG
Trigger: ACCACAAGGTATTTCAAGCCAACAACGATGCAACTG...AACAAGGGAAAGAGTTAACCTGTCACATAGCAGGTTAACTTTTTCAGGGTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TTTATTGGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCCAGTTGCATCGTTGTTaGCTTGAAATACCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: FIGFQELDDDCLDGTSSVQLHRC*LEIPCG
Trigger: ACCACAAGGTATTTCAAGCCAACAACGATGCAACTG...GACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCCAATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CCA 90 bp TTTCCAGCACACAGGCAATCCTTAGGCGTTAATATGAAATCAAGATTTGGATCTAAGGCTGAAGCAGCATaGTTAAGCATTCTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: FPAHRQSLGVNMKSRFGSKAEAA*LSILVH
Trigger: GTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTT...AGATCCAAATCTTGATTTCATATTAACGCCTAAGGATTGCCTGTGTGCTGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR TCA 90 bp GAGAAAGCGGAGAATAATGATCACTGCTCCACTTCTATTCTGGAAAAGTCATTCGCTGGGCATACTGGTTaGGTTTCAAATATATTTCCA +
Preference number: 4 (lower is better)
Translates to: EKAENNDHCSTSILEKSFAGHTG*VSNIFP
Trigger: TGGAAATATATTTGAAACTCAACCAGTATGCCCAGC...GAATGACTTTTCCAGAATAGAAGTGGAGCAGTGATCATTATTCTCCGCTTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp TGTTTTATTGGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCATCAAAGATCAGGAACTaGAGGATGATCTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: CFIGFQELDDDCLDGTSSSKIRN*RMISIL
Trigger: CAAGATGGAGATCATCCTGCAGTTCCTGATCTTTGA...TGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCCAATAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR GCA 90 bp AGACAGGGTCTTCTTAAAGATCGGCTATCAACTTCAGAAATAGTACTGTATTTCTGCCCAGAGGAACATTaGACTGAAAGTTCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: RQGLLKDRLSTSEIVLYFCPEEH*TESSLV
Trigger: CACTAGAGAACTTTCAGTGCAATGTTCCTCTGGGCA...GAAATACAGTACTATTTCTGAAGTTGATAGCCGATCTTTAAGAAGACCCTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CCA 90 bp TTCCTATTCAATTCTGGCTTTAATCCCAAAAATGTGGGACAAGGGAAAAGACAACACTATGAAAATTGCTaGGGTAGACAGAGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: FLFNSGFNPKNVGQGKRQHYENC*GRQSKG
Trigger: GCCTTTGCTCTGTCTACCCCAGCAATTTTCATAGTG...TTGTCTTTTCCCTTGTCCCACATTTTTGGGATTAAAGCCAGAATTGAATAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CCA 90 bp GTCCAGGCGCTTCTATGGATTTTGACGTGTGAAGTTTCCTTTCCAGTTTGTTTTTCTAGAATTAGCGAATaGCTCCTATTCACTCACAAA +
Preference number: 4 (lower is better)
Translates to: VQALLWILTCEVSFPVCFSRISE*LLFTHK
Trigger: TTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGA...AAAACAAACTGGAAAGGAAACTTCACACGTCAAAATCCATAGAAGCGCCTGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TGGATCTTGATGCGAACAATCTTATCCTTCACACAGTTTCATTCTATTCCTGATAAGGCTGAAGCAGCATaGTTAAGCATTCTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: WILMRTILSFTQFHSIPDKAEAA*LSILVH
Trigger: GTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTT...ATCAGGAATAGAATGAAACTGTGTGAAGGATAAGATTGTTCGCATCAAGATCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp TTTCCAGCACACAGGCAATCCTTAGGCGTTAATATGAAATCAAGATTTGGATCTAGACAAATGAAATCGTaGGTGACCACAGCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: FPAHRQSLGVNMKSRFGSRQMKS*VTTAAK
Trigger: TTTTGCTGCTGTGGTCACCCACGATTTCATTTGTCT...AGATCCAAATCTTGATTTCATATTAACGCCTAAGGATTGCCTGTGTGCTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp TGGATCTTGATGCGAACAATCTTATCCTTCACACAGTTTCATTCTATTCCTGATTTGCAGAAGAAGAATTaGTCCAGTCCACCTCGTATT +
Preference number: 4 (lower is better)
Translates to: WILMRTILSFTQFHSIPDLQKKN*SSPPRI
Trigger: AATACGAGGTGGACTGGAGCAATTCTTCTTCTGCAA...ATCAGGAATAGAATGAAACTGTGTGAAGGATAAGATTGTTCGCATCAAGATCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp TTTCCAGCACACAGGCAATCCTTAGGCGTTAATATGAAATCAAGATTTGGATCTAAACTTACCTTCTTCTaGAGGCTACTTCTGGAAATC +
Preference number: 4 (lower is better)
Translates to: FPAHRQSLGVNMKSRFGSKLTFF*RLLLEI
Trigger: GATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTT...AGATCCAAATCTTGATTTCATATTAACGCCTAAGGATTGCCTGTGTGCTGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR GCA 90 bp TTTCCAGCACACAGGCAATCCTTAGGCGTTAATATGAAATCAAGATTTGGATCTGAGAATAATGATCACTaGTCCACTTCTATTCTGGAA +
Preference number: 4 (lower is better)
Translates to: FPAHRQSLGVNMKSRFGSENNDH*STSILE
Trigger: TTCCAGAATAGAAGTGGAGCAGTGATCATTATTCTC...AGATCCAAATCTTGATTTCATATTAACGCCTAAGGATTGCCTGTGTGCTGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CCA 90 bp GAGAAAGCGGAGAATAATGATCACTGCTCCACTTCTATTCTGGAAAAGTCATTCATAGGCTGGGCATACTaGTTGAGTTTCAAATATATT +
Preference number: 4 (lower is better)
Translates to: EKAENNDHCSTSILEKSFIGWAY*LSFKYI
Trigger: AATATATTTGAAACTCAACCAGTATGCCCAGCCTAT...GAATGACTTTTCCAGAATAGAAGTGGAGCAGTGATCATTATTCTCCGCTTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
3UTR CAA 72 bp AAACAGACTACTGTTTTTCCTACGTCAGTCCCAGACTaGTTATTCTCTATGACTTATTCCAAGATTGGATGT +
Preference number: 4 (lower is better)
Translates to: KQTTVFPTSVPD*LFSMTYSKIGC
Trigger: ACATCCAATCTTGGAATAAGTCATAGAGAATAACAAGTCTGGGACTGACGTAGGAAAAACAGTAGTCTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS GCA 90 bp CGGAGGCAGCCGCCGCCGGACAGCCCGAGTGGAAGGCGGCCGCCCTaGTCTTGTCCTCGCCGGGTTCCCCCGGCGGGAGCCTCCCCCAAC +
Preference number: 5 (lower is better)
Translates to: RRQPPPDSPSGRRPP*SCPRRVPPAGASPN
Trigger: GTTGGGGGAGGCTCCCGCCGGGGGAACCCGGCGAGGACAAGAGCAGGGCGGCCGCCTTCCACTCGGGCTGTCCGGCGGCGGCTGCCTCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357785.10
ENST00000360409.7
ENST00000417189.5
ENST00000478013.1
CDS CCA 90 bp GAGGAGAGTAGCTCCTCCGCGCCGGGCCGCCGGTGCGTAACGCCCTaGGGAAGAAGCGCCCCCGGGCACCCCCAGGGCGCGCCGCCTTGG +
Preference number: 5 (lower is better)
Translates to: EESSSSAPGRRCVTP*GRSAPGHPQGAPPW
Trigger: CCAAGGCGGCGCGCCCTGGGGGTGCCCGGGGGCGCTTCTTCCCCAGGGCGTTACGCACCGGCGGCCCGGCGCGGAGGAGCTACTCTCCTC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000464003.1
CDS TCA 90 bp GCTGGCGCCCGCCCTCACCTCCACCTCGCCGAGTGTCTGTGCGGCTaGGGATGTGCTGGGGGCCGGCTGCAGGCTGGTGCCTCGCTCGCG +
Preference number: 5 (lower is better)
Translates to: AGARPHLHLAECLCG*GCAGGRLQAGASLA
Trigger: CGCGAGCGAGGCACCAGCCTGCAGCCGGCCCCCAGCACATCCTCAGCCGCACAGACACTCGGCGAGGTGGAGGTGAGGGCGGGCGCCAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357785.10
ENST00000360409.7
ENST00000417189.5
CDS CCA 90 bp GGCTGGCTTCCCGCACCACCTGCAGCGCCACCCCGCGGCCGCCCGTaGCCTGGTACTGGAACTCCATGCACACCGGGCTTCGGGGCAGGT +
Preference number: 5 (lower is better)
Translates to: GWLPAPPAAPPRGRP*PGTGTPCTPGFGAG
Trigger: ACCTGCCCCGAAGCCCGGTGTGCATGGAGTTCCAGTACCAGGCCACGGGCGGCCGCGGGGTGGCGCTGCAGGTGGTGCGGGAAGCCAGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000485684.5
CDS CCA 90 bp GCTTCCCGCACCACCTGCAGCGCCACCCCGCGGCCGCCCGTGGCCTaGTACTGGAACTCCATGCACACCGGGCTTCGGGGCAGGTGGACA +
Preference number: 5 (lower is better)
Translates to: ASRTTCSATPRPPVA*YWNSMHTGLRGRWT
Trigger: TGTCCACCTGCCCCGAAGCCCGGTGTGCATGGAGTTCCAGTACCAGGCCACGGGCGGCCGCGGGGTGGCGCTGCAGGTGGTGCGGGAAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000485684.5
CDS CCA 90 bp TCGCCGCCCTGGTCCTCACGGATGACCCACAGCAACTTGCTCTCCTaGCTGGCTTCCCGCACCACCTGCAGCGCCACCCCGCGGCCGCCC +
Preference number: 5 (lower is better)
Translates to: SPPWSSRMTHSNLLS*LASRTTCSATPRPP
Trigger: GGGCGGCCGCGGGGTGGCGCTGCAGGTGGTGCGGGAAGCCAGCCAGGAGAGCAAGTTGCTGTGGGTCATCCGTGAGGACCAGGGCGGCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000485684.5
CDS GCA 90 bp GGGGAGTCTGAGGAAGGAAGCTGCTGCTGCTGTTGCTGCTGCTGGTaGGGCGGCGGTGGCGGCTGGGATCGCCTGGGAGTGAGCGAGCCC +
Preference number: 5 (lower is better)
Translates to: GESEEGSCCCCCCCW*GGGGGWDRLGVSEP
Trigger: GGGCTCGCTCACTCCCAGGCGATCCCAGCCGCCACCGCCGCCGCACCAGCAGCAGCAACAGCAGCAGCAGCTTCCTTCCTCAGACTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357785.10
ENST00000360409.7
ENST00000417189.5
CDS CCA 90 bp GCACGGCGCCCCCGGCGGCCATTACGTAATACCAGTAGGCTGGGATaGGCTGCATGGGCACCGTGTCCACTGTGGGCTCGGTCCCTGGCA +
Preference number: 5 (lower is better)
Translates to: ARRPRRPLRNTSRLG*AAWAPCPLWARSLA
Trigger: TGCCAGGGACCGAGCCCACAGTGGACACGGTGCCCATGCAGCCCATCCCAGCCTACTGGTATTACGTAATGGCCGCCGGGGGCGCCGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS CCA 90 bp CACCAGCACGGCGCCCCCGGCGGCCATTACGTAATACCAGTAGGCTaGGATGGGCTGCATGGGCACCGTGTCCACTGTGGGCTCGGTCCC +
Preference number: 5 (lower is better)
Translates to: HQHGAPGGHYVIPVG*DGLHGHRVHCGLGP
Trigger: GGGACCGAGCCCACAGTGGACACGGTGCCCATGCAGCCCATCCCAGCCTACTGGTATTACGTAATGGCCGCCGGGGGCGCCGTGCTGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS TCA 90 bp TCCCCCAACGGCTACACCCGCTTGGCCAGCCTCTCGAGGGGAGTCTaGGGAAGGAAGCTGCTGCTGCTGTTGCTGCTGCTGGTGCGGCGG +
Preference number: 5 (lower is better)
Translates to: SPNGYTRLASLSRGV*GRKLLLLLLLLVRR
Trigger: CCGCCGCACCAGCAGCAGCAACAGCAGCAGCAGCTTCCTTCCTCAGACTCCCCTCGAGAGGCTGGCCAAGCGGGTGTAGCCGTTGGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357785.10
ENST00000360409.7
ENST00000417189.5
CDS GCA 90 bp CCAGTGTGGTGCAGCTTCGGGAGCTCAGGCCCGAGTAGGAACAGGTaGAGTAGAGCAGGAGGCCTGCACAGGTGGCCCCCAGGAGGACGC +
Preference number: 5 (lower is better)
Translates to: PVWCSFGSSGPSRNR*SRAGGLHRWPPGGR
Trigger: GCGTCCTCCTGGGGGCCACCTGTGCAGGCCTCCTGCTCTACTGCACCTGTTCCTACTCGGGCCTGAGCTCCCGAAGCTGCACCACACTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000467850.1
CDS CCA 90 bp TGGGATGGGCTGCATGGGCACCGTGTCCACTGTGGGCTCGGTCCCTaGCAGGAGGGTGCCCCCTGCAAAAGCCGAGATGGGTTCCATGCA +
Preference number: 5 (lower is better)
Translates to: WDGLHGHRVHCGLGP*QEGAPCKSRDGFHA
Trigger: TGCATGGAACCCATCTCGGCTTTTGCAGGGGGCACCCTCCTGCCAGGGACCGAGCCCACAGTGGACACGGTGCCCATGCAGCCCATCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357118.8
CDS-3UTR CAA 90 bp GTTTTGTCCCAGCAGAGAACACAGCCCCGTTCCTGCAATGACTTAGCCACCGCGGCGGCCGCCCTGCTCTaGTCCTCGCCGGGTTCCCCC +
Preference number: 5 (lower is better)
Translates to: VLSQQRTQPRSCNDLATAAAALL*SSPGSP
Trigger: GGGGGAACCCGGCGAGGACAAGAGCAGGGCGGCCGC...CGCGGTGGCTAAGTCATTGCAGGAACGGGGCTGTGTTCTCTGCTGGGACAAAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS TCA 90 bp CATCACACGGCCCCCAGGCAGCTGTGTGATCTCAGAGGCGTAAACTaGCACACATCCCGCGGCACCCTTGACGGACACACGGGCGGAGGC +
Preference number: 5 (lower is better)
Translates to: HHTAPRQLCDLRGVN*HTSRGTLDGHTGGG
Trigger: GCCTCCGCCCGTGTGTCCGTCAAGGGTGCCGCGGGATGTGTGTCAGTTTACGCCTCTGAGATCACACAGCTGCCTGGGGGCCGTGTGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357785.10
ENST00000360409.7
ENST00000417189.5
ENST00000478013.1
CDS GCA 90 bp AGGGATTCGAGGGAACCAGCCCGAGCGGCTGCTAACCAGGCGGGCTaGACTGGGGCTCCAGAGGTATTCCTGGGTGGAAGAGGCGGAGAT +
Preference number: 5 (lower is better)
Translates to: RDSREPARAAANQAG*TGAPEVFLGGRGGD
Trigger: ATCTCCGCCTCTTCCACCCAGGAATACCTCTGGAGCCCCAGTGCAGCCCGCCTGGTTAGCAGCCGCTCGGGCTGGTTCCCTCGAATCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
ENST00000478054.1
CDS-3UTR CAA 90 bp GTGCCGAGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACGCGGCCGCCCTGCTCTaGTCCTCGCCGGGTTCCCCC +
Preference number: 5 (lower is better)
Translates to: VPSAKISCDTRTLGQSHNAAALL*SSPGSP
Trigger: GGGGGAACCCGGCGAGGACAAGAGCAGGGCGGCCGC...GTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACTCGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS GCA 90 bp GGGTGCTGTTCTTGCTTCGGCCCTCAGCAGTGCGAGCCACGGTCTTaGTCTAGCTTAATGGTTAGGGTGGGCTCCACCGCCAGAGGGGCC +
Preference number: 5 (lower is better)
Translates to: GCCSCFGPQQCEPRS*SSLMVRVGSTARGA
Trigger: GGCCCCTCTGGCGGTGGAGCCCACCCTAACCATTAAGCTAGAGCAAGACCGTGGCTCGCACTGCTGAGGGCCGAAGCAAGAACAGCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS CCA 90 bp CGGCTGCTAACCAGGCGGGCTGCACTGGGGCTCCAGAGGTATTCCTaGGTGGAAGAGGCGGAGATCTGGGAGTCTGCAATGAGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: RLLTRRAALGLQRYS*VEEAEIWESAMRPE
Trigger: CTCAGGCCTCATTGCAGACTCCCAGATCTCCGCCTCTTCCACCCAGGAATACCTCTGGAGCCCCAGTGCAGCCCGCCTGGTTAGCAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
ENST00000478054.1
CDS CCA 90 bp AGAACTCCATTCCGGGAGCTGGTGAGAGAGAGAGAGCACTCACTCTaGAGCCTCTCATGTCTGCCGGCCACTGAGCGCCAACAGCCCCCG +
Preference number: 5 (lower is better)
Translates to: RTPFRELVREREHSL*SLSCLPATERQQPP
Trigger: CGGGGGCTGTTGGCGCTCAGTGGCCGGCAGACATGAGAGGCTCCAGAGTGAGTGCTCTCTCTCTCTCACCAGCTCCCGGAATGGAGTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467850.1
CDS-3UTR CAA 90 bp TCCAGGCTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGGGATGGAGCCGGCTTTGTaGAGGGGTCCACCTCCCATC +
Preference number: 5 (lower is better)
Translates to: SRLPLTSPGRLPTERRYGMEPAL*RGPPPI
Trigger: GATGGGAGGTGGACCCCTCAACAAAGCCGGCTCCAT...CCCATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAGCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS TCA 90 bp CAGCCGAAGAGCTCCAGCCGGAGGGCGATACCTGAGTGCCAGGTCTaGGGGCGGATTCTAACAAACCTTGTCAGCAGTGGAGCGTGGAGC +
Preference number: 5 (lower is better)
Translates to: QPKSSSRRAIPECQV*GRILTNLVSSGAWS
Trigger: GCTCCACGCTCCACTGCTGACAAGGTTTGTTAGAATCCGCCCTCAGACCTGGCACTCAGGTATCGCCCTCCGGCTGGAGCTCTTCGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
ENST00000478054.1
CDS CCA 90 bp GTGGCTCTTGGTGGACCAGGTAGTAACGCGCAGAGAAGCCATCCTTaGCCACCGCCATGTCCGTGTGAAAGGTCAGGGAGAGGATCCCCG +
Preference number: 5 (lower is better)
Translates to: VALGGPGSNAQRSHP*PPPCPCERSGRGSP
Trigger: CGGGGATCCTCTCCCTGACCTTTCACACGGACATGGCGGTGGCCAAGGATGGCTTCTCTGCGCGTTACTACCTGGTCCACCAAGAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
CDS CCA 90 bp CCTCTTCGGTGGGGTAGGGGGTGGTTGTCTCTTCGCTCTTCACAGTaGGTCCCAGCGTCTCTACCGTGGGCTTGGAGTCTGTCCAGTCAC +
Preference number: 5 (lower is better)
Translates to: PLRWGRGWLSLRSSQ*VPASLPWAWSLSSH
Trigger: GTGACTGGACAGACTCCAAGCCCACGGTAGAGACGCTGGGACCCACTGTGAAGAGCGAAGAGACAACCACCCCCTACCCCACCGAAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
CDS CCA 90 bp CATCTGGAAACGTCCGGTCGTTTGGGCTGGAGCTGCTGGCCCAGGTaGTCCGGAGCCACTTGGCATGGTCATACATCCAACCACAGGGCT +
Preference number: 5 (lower is better)
Translates to: HLETSGRLGWSCWPR*SGATWHGHTSNHRA
Trigger: AGCCCTGTGGTTGGATGTATGACCATGCCAAGTGGCTCCGGACCACCTGGGCCAGCAGCTCCAGCCCAAACGACCGGACGTTTCCAGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000460987.1
ENST00000468256.1
CDS CCA 90 bp CCTCTTCGGTGGGGTAGGGGGTGGTTGTCTCTTCGCTCTTCACAGTaGGTCCCAGCGTCTCTACCGTGGGCTTGGAGTCTGTGTAAGGGC +
Preference number: 5 (lower is better)
Translates to: PLRWGRGWLSLRSSQ*VPASLPWAWSLCKG
Trigger: GCCCTTACACAGACTCCAAGCCCACGGTAGAGACGCTGGGACCCACTGTGAAGAGCGAAGAGACAACCACCCCCTACCCCACCGAAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460987.1
CDS-3UTR CAA 90 bp AGAAAGCAACCCTGTGGCCCTGTTGACCACCTAGTCCGGGAGAGTGTGGAGGTAGAAACGTCCGGTCGTTaGGGCTGGAGCTGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: RKQPCGPVDHLVRESVEVETSGR*GWSCWP
Trigger: GGGCCAGCAGCTCCAGCCCAAACGACCGGACGTTTC...TACCTCCACACTCTCCCGGACTAGGTGGTCAACAGGGCCACAGGGTTGCTTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp ACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGGTAACGCGGCCGCCCTGCTCTaGTCCTCGCCGGGTTCCCCC +
Preference number: 5 (lower is better)
Translates to: TSSVSTPCTTLSLPVEGNAAALL*SSPGSP
Trigger: GGGGGAACCCGGCGAGGACAAGAGCAGGGCGGCCGC...GTTACCCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS TCA 90 bp ATCTGTGACCCGGCAGCCGAAGAGCTCCAGCCGGAGGGCGATACCTaGGTGCCAGGTCTGAGGGCGGATTCTAACAAACCTTGTCAGCAG +
Preference number: 5 (lower is better)
Translates to: ICDPAAEELQPEGDT*VPGLRADSNKPCQQ
Trigger: CTGCTGACAAGGTTTGTTAGAATCCGCCCTCAGACCTGGCACTCAGGTATCGCCCTCCGGCTGGAGCTCTTCGGCTGCCGGGTCACAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
ENST00000478054.1
CDS TCA 90 bp TTCCTGGGTGGAAGAGGCGGAGATCTGGGAGTCTGCAATGAGGCCTaGGAGCATCCCCAGCATGTTGGAGCAGGGAGCATCTGTGACCCG +
Preference number: 5 (lower is better)
Translates to: FLGGRGGDLGVCNEA*EHPQHVGAGSICDP
Trigger: CGGGTCACAGATGCTCCCTGCTCCAACATGCTGGGGATGCTCTCAGGCCTCATTGCAGACTCCCAGATCTCCGCCTCTTCCACCCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
ENST00000478054.1
CDS GCA 90 bp CTTTGGCTGCAGGAGTCCAGCAGTACCACAGTGGCCTCTGGTTTCTaGCCACAGCTTCTATACAGGCCCCCAAACAGCCTGTGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: LWLQESSSTTVASGF*PQLLYRPPNSLWVP
Trigger: GGGCACCCACAGGCTGTTTGGGGGCCTGTATAGAAGCTGTGGGCAGAAACCAGAGGCCACTGTGGTACTGCTGGACTCCTGCAGCCAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464003.1
CDS CCA 90 bp CCTCAAAGCTGCAGTTCTCCCCACACTCTGTGGCCTCCTCTTCGGTaGGGTAGGGGGTGGTTGTCTCTTCGCTCTTCACAGTGGGTCCCA +
Preference number: 5 (lower is better)
Translates to: PQSCSSPHTLWPPLR*GRGWLSLRSSQWVP
Trigger: TGGGACCCACTGTGAAGAGCGAAGAGACAACCACCCCCTACCCCACCGAAGAGGAGGCCACAGAGTGTGGGGAGAACTGCAGCTTTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000460987.1
CDS-3UTR CAA 90 bp CTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGGGATAAGGTCCCTTCGAACAGCTTaGGCTGCTGGGTCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: LPLTSPGRLPTERRYGIRSLRTA*AAGSWG
Trigger: ACCCCAGGACCCAGCAGCCAAAGCTGTTCGAAGGGA...CCTTATCCCATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp CAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCAGAAACGTCCGGTCGTTaGGGCTGGAGCTGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: QLSLELWSAWGWISSDSPETSGR*GWSCWP
Trigger: GGGCCAGCAGCTCCAGCCCAAACGACCGGACGTTTC...TGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GTGCCGAGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACGAAACGTCCGGTCGTTaGGGCTGGAGCTGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: VPSAKISCDTRTLGQSHNETSGR*GWSCWP
Trigger: GGGCCAGCAGCTCCAGCCCAAACGACCGGACGTTTC...GTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACTCGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS CCA 90 bp CCGGCGACCACCTCTCCGGGTATACCCGCACATACTGTGCCGGAATaGGGTCAAACCTTCGGATGTCAGGGGTGTCATAGTGCATGTTCC +
Preference number: 5 (lower is better)
Translates to: PATTSPGIPAHTVPE*GQTFGCQGCHSACS
Trigger: GGAACATGCACTATGACACCCCTGACATCCGAAGGTTTGACCCCATTCCGGCACAGTATGTGCGGGTATACCCGGAGAGGTGGTCGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
CDS CCA 90 bp TTTGGGCTGGAGCTGCTGGCCCAGGTGGTCCGGAGCCACTTGGCATaGTCATACATCCAACCACAGGGCTCCTCGAGGAAATCGAAGTTG +
Preference number: 5 (lower is better)
Translates to: FGLELLAQVVRSHLA*SYIQPQGSSRKSKL
Trigger: CAACTTCGATTTCCTCGAGGAGCCCTGTGGTTGGATGTATGACCATGCCAAGTGGCTCCGGACCACCTGGGCCAGCAGCTCCAGCCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000460987.1
ENST00000468256.1
CDS-3UTR CAA 90 bp GTTTTGTCCCAGCAGAGAACACAGCCCCGTTCCTGCAATGACTTAGCCACCGCGGCACGGTGGGTCTGGTaGGCCTCTCACTTGGTGTCT +
Preference number: 5 (lower is better)
Translates to: VLSQQRTQPRSCNDLATAARWVW*ASHLVS
Trigger: AGACACCAAGTGAGAGGCCAACCAGACCCACCGTGC...CGCGGTGGCTAAGTCATTGCAGGAACGGGGCTGTGTTCTCTGCTGGGACAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp CTACTGTGGGCCGAACTCAGGAGGAGCCCTAAAGCTAAGCCCTTGGGCTTGACATCCAGCCAATCGTACTaGCAGTCCCCCTCTCCCACC +
Preference number: 5 (lower is better)
Translates to: LLWAELRRSPKAKPLGLTSSQSY*QSPSPT
Trigger: GGTGGGAGAGGGGGACTGCAAGTACGATTGGCTGGA...TGTCAAGCCCAAGGGCTTAGCTTTAGGGCTCCTCCTGAGTTCGGCCCACAGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GTGCCGAGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACGCAGAGAAGCCATCCTaGGCCACCGCCATGTCCGTG +
Preference number: 5 (lower is better)
Translates to: VPSAKISCDTRTLGQSHNAEKPS*ATAMSV
Trigger: CACGGACATGGCGGTGGCCAAGGATGGCTTCTCTGC...GTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACTCGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp AGAAAGCAACCCTGTGGCCCTGTTGACCACCTAGTCCGGGAGAGTGTGGAGGTATTGGGGGTCCAGCCATaGTCATCACCATGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: RKQPCGPVDHLVRESVEVLGVQP*SSPWSR
Trigger: CCGGCTCCATGGTGATGACAATGGCTGGACCCCCAA...TACCTCCACACTCTCCCGGACTAGGTGGTCAACAGGGCCACAGGGTTGCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GATCCAGGCTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGGTGGTCCGGAGCCACTaGGCATGGTCATACATCCAA +
Preference number: 5 (lower is better)
Translates to: DPGFPSRLLADCPLRGGMVVRSH*AWSYIQ
Trigger: TTGGATGTATGACCATGCCAAGTGGCTCCGGACCAC...CATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAGCCTGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS TCA 90 bp CTGCTCTGTGGGGCAGAGATAACAGAACTCCATTCCGGGAGCTGGTaGGAGAGAGAGAGCACTCACTCTGGAGCCTCTCATGTCTGCCGG +
Preference number: 5 (lower is better)
Translates to: LLCGAEITELHSGSW*ERESTHSGASHVCR
Trigger: CCGGCAGACATGAGAGGCTCCAGAGTGAGTGCTCTCTCTCTCTCACCAGCTCCCGGAATGGAGTTCTGTTATCTCTGCCCCACAGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467850.1
CDS GCA 90 bp AGAAATTCCTGTCATCTGGAAACGTCCGGTCGTTTGGGCTGGAGCTaGTGGCCCAGGTGGTCCGGAGCCACTTGGCATGGTCATACATCC +
Preference number: 5 (lower is better)
Translates to: RNSCHLETSGRLGWS*WPRWSGATWHGHTS
Trigger: GGATGTATGACCATGCCAAGTGGCTCCGGACCACCTGGGCCAGCAGCTCCAGCCCAAACGACCGGACGTTTCCAGATGACAGGAATTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000460987.1
ENST00000468256.1
CDS GCA 90 bp GGGCTGATGAGCCGGGCATACTGGCCCTCTCTCTGGCTGTCACTCTaGAGCCGCAAGAAATTCCTGTCATCTGGAAACGTCCGGTCGTTT +
Preference number: 5 (lower is better)
Translates to: GLMSRAYWPSLWLSL*SRKKFLSSGNVRSF
Trigger: AAACGACCGGACGTTTCCAGATGACAGGAATTTCTTGCGGCTGCAGAGTGACAGCCAGAGAGAGGGCCAGTATGCCCGGCTCATCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000460987.1
ENST00000468256.1
CDS-3UTR CAA 90 bp GAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGACCATGGAGCCGGCTTaGTTGAGGGGTCCACCTCCC +
Preference number: 5 (lower is better)
Translates to: EQNQLSLELWSAWGWISSTMEPA*LRGPPP
Trigger: GGGAGGTGGACCCCTCAACAAAGCCGGCTCCATGGT...CGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp TCCAGGCTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGGGACCTGGAGATACTCCTaGTTGGAATCCAAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: SRLPLTSPGRLPTERRYGTWRYS*LESKLG
Trigger: CCCCAACTTGGATTCCAACAAGGAGTATCTCCAGGT...CCCATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAGCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp CAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCATCCCTTCGAACAGCTTaGGCTGCTGGGTCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: QLSLELWSAWGWISSDSPSLRTA*AAGSWG
Trigger: ACCCCAGGACCCAGCAGCCAAAGCTGTTCGAAGGGA...TGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GTTTTGTCCCAGCAGAGAACACAGCCCCGTTCCTGCAATGACTTAGCCACCGCGTGGGGTAGGGGGTGGTaGTCTCTTCGCTCTTCACAG +
Preference number: 5 (lower is better)
Translates to: VLSQQRTQPRSCNDLATAWGRGW*SLRSSQ
Trigger: CTGTGAAGAGCGAAGAGACAACCACCCCCTACCCCA...CGCGGTGGCTAAGTCATTGCAGGAACGGGGCTGTGTTCTCTGCTGGGACAAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGAGTTCACACGAAACGTCCGGTCGTTaGGGCTGGAGCTGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: DKSAQGWGSGKEMSESSHETSGR*GWSCWP
Trigger: GGGCCAGCAGCTCCAGCCCAAACGACCGGACGTTTC...GTGTGAACTCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp TCCAGGCTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGGGACCCAAGGAGGATGGTaGGGATTGATAAGAGTGCTC +
Preference number: 5 (lower is better)
Translates to: SRLPLTSPGRLPTERRYGTQGGW*GLIRVL
Trigger: GAGCACTCTTATCAATCCCAACCATCCTCCTTGGGT...CCCATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAGCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGGTAAACGGCTACACCCGCTaGGCCAGCCTCTCGAGGGGA +
Preference number: 5 (lower is better)
Translates to: GHHQSQLPVPHLASLLRVNGYTR*ASLSRG
Trigger: TCCCCTCGAGAGGCTGGCCAAGCGGGTGTAGCCGTT...TACCCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CAA 90 bp AGAAAGCAACCCTGTGGCCCTGTTGACCACCTAGTCCGGGAGAGTGTGGAGGTATGGCAGCTTGTAGGGTaGGCTGGCAGAACCTACACC +
Preference number: 5 (lower is better)
Translates to: RKQPCGPVDHLVRESVEVWQLVG*AGRTYT
Trigger: GGTGTAGGTTCTGCCAGCCAACCCTACAAGCTGCCA...TACCTCCACACTCTCCCGGACTAGGTGGTCAACAGGGCCACAGGGTTGCTTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS GCA 90 bp CTAAATTCCACGACTCCGATGCCACACACGCAGAACCCAACACAATaGCACGCGCGATGGCGTTACAAGAGGAGTTGGGTGGCGTACGGT +
Preference number: 5 (lower is better)
Translates to: LNSTTPMPHTQNPTQ*HARWRYKRSWVAYG
Trigger: ACCGTACGCCACCCAACTCCTCTTGTAACGCCATCGCGCGTGGCATTGTGTTGGGTTCTGCGTGTGTGGCATCGGAGTCGTGGAATTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464003.1
CDS CCA 90 bp GCTCTGGCTTCCACAGCAGTGATACTGTCTCCTCCGCGGGCTCCCTaGATGATGACACCTTTCACTGTCTTGGGTGTTCCCAGATCTACC +
Preference number: 5 (lower is better)
Translates to: ALASTAVILSPPRAP*MMTPFTVLGVPRST
Trigger: GGTAGATCTGGGAACACCCAAGACAGTGAAAGGTGTCATCATCCAGGGAGCCCGCGGAGGAGACAGTATCACTGCTGTGGAAGCCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
ENST00000478054.1
CDS CCA 90 bp GCAAGTGGCTGGAGGGAGGAGTCAAGGGAAGTTCACCAGAGATGGTaGCCTTGGATTGCACTGAGTCAGGCAAAGCTGCGGCTTGTGAGT +
Preference number: 5 (lower is better)
Translates to: ASGWREESREVHQRW*PWIALSQAKLRLVS
Trigger: ACTCACAAGCCGCAGCTTTGCCTGACTCAGTGCAATCCAAGGCCACCATCTCTGGTGAACTTCCCTTGACTCCTCCCTCCAGCCACTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464003.1
CDS CCA 90 bp CTCGCCCTTTTGTCCTTTGGCTGCAGGAGTCCAGCAGTACCACAGTaGCCTCTGGTTTCTGCCCACAGCTTCTATACAGGCCCCCAAACA +
Preference number: 5 (lower is better)
Translates to: LALLSFGCRSPAVPQ*PLVSAHSFYTGPQT
Trigger: TGTTTGGGGGCCTGTATAGAAGCTGTGGGCAGAAACCAGAGGCCACTGTGGTACTGCTGGACTCCTGCAGCCAAAGGACAAAAGGGCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464003.1
CDS CCA 90 bp AGGGGTGGGGGCAGGGCGTGTGCATCTCATGGATGGGATACACAGTaGGACAGGACGGTGCTTACTTGCAGTCGTGCTTCTCGATTTCAA +
Preference number: 5 (lower is better)
Translates to: RGGGRACASHGWDTQ*DRTVLTCSRASRFQ
Trigger: TTGAAATCGAGAAGCACGACTGCAAGTAAGCACCGTCCTGTCCCACTGTGTATCCCATCCATGAGATGCACACGCCCTGCCCCCACCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478013.1
CDS CCA 90 bp AGCCCCTCGGCTCTGTGGTTAACTGAAACCGCTGCCTTGGTACCCTaGAACTGCAAAAGCCGAGATGGGTTCCATGCAGTTCTCCAGTGG +
Preference number: 5 (lower is better)
Translates to: SPSALWLTETAALVP*NCKSRDGFHAVLQW
Trigger: CCACTGGAGAACTGCATGGAACCCATCTCGGCTTTTGCAGTTCCAGGGTACCAAGGCAGCGGTTTCAGTTAACCACAGAGCCGAGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485684.5
CDS-3UTR CAA 90 bp CTACTGTGGGCCGAACTCAGGAGGAGCCCTAAAGCTAAGCCCTTGGGCTTGACAATGTTCCCACAGTGTTaGCCCAGGAGGTCTGCGGAT +
Preference number: 5 (lower is better)
Translates to: LLWAELRRSPKAKPLGLTMFPQC*PRRSAD
Trigger: ATCCGCAGACCTCCTGGGCAAACACTGTGGGAACAT...TGTCAAGCCCAAGGGCTTAGCTTTAGGGCTCCTCCTGAGTTCGGCCCACAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp AGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACACCACCTCCAGCCAATCGTACTaGCAGTCCCCCTCTCCCACC +
Preference number: 5 (lower is better)
Translates to: SAKISCDTRTLGQSHNTTSSQSY*QSPSPT
Trigger: GGTGGGAGAGGGGGACTGCAAGTACGATTGGCTGGA...GGTGGTGTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp CTACTGTGGGCCGAACTCAGGAGGAGCCCTAAAGCTAAGCCCTTGGGCTTGACATTGGTCCCACAGTACTaGCCAATCAGGGGGCCAACA +
Preference number: 5 (lower is better)
Translates to: LLWAELRRSPKAKPLGLTLVPQY*PIRGPT
Trigger: TGTTGGCCCCCTGATTGGCAAGTACTGTGGGACCAA...TGTCAAGCCCAAGGGCTTAGCTTTAGGGCTCCTCCTGAGTTCGGCCCACAGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGAGTTCACACGCAGAGAAGCCATCCTaGGCCACCGCCATGTCCGTG +
Preference number: 5 (lower is better)
Translates to: DKSAQGWGSGKEMSESSHAEKPS*ATAMSV
Trigger: CACGGACATGGCGGTGGCCAAGGATGGCTTCTCTGC...GTGTGAACTCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTGCAGAGAAGCCATCCTaGGCCACCGCCATGTCCGTG +
Preference number: 5 (lower is better)
Translates to: GWLGLIRVLRVGDPGKRCAEKPS*ATAMSV
Trigger: CACGGACATGGCGGTGGCCAAGGATGGCTTCTCTGC...ACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp AGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGAGTTCACACAGAAACCATGGAGCCGGCTTaGTTGAGGGGTCCACCTCCC +
Preference number: 5 (lower is better)
Translates to: RVLRVGDPGKRCLRVHTETMEPA*LRGPPP
Trigger: GGGAGGTGGACCCCTCAACAAAGCCGGCTCCATGGT...TTCTGTGTGAACTCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGACCATGGAGCCGGCTTaGTTGAGGGGTCCACCTCCC +
Preference number: 5 (lower is better)
Translates to: DGTSSVSTPCTTLSLPVETMEPA*LRGPPP
Trigger: GGGAGGTGGACCCCTCAACAAAGCCGGCTCCATGGT...CTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CAA 90 bp CTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGGGATAAGGAGTGGAGCGTGGAGCTaGTTCAGAACCACCTCAGTT +
Preference number: 5 (lower is better)
Translates to: LPLTSPGRLPTERRYGIRSGAWS*FRTTSV
Trigger: AACTGAGGTGGTTCTGAACAAGCTCCACGCTCCACT...CCTTATCCCATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GATCCAGGCTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGGGGAGCTGCAAATCTTaGTCATCCTCAAAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: DPGFPSRLLADCPLRGGMGSCKS*SSSKLQ
Trigger: CTGCAGCTTTGAGGATGACAAAGATTTGCAGCTCCC...CATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAGCCTGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGCAGCTGAGCCTTGAGTaGTGGAGTGCTTGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: EQNQLSLELWSAWGWISSQLSLE*WSAWGW
Trigger: CCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTG...CGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GTGCCGAGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACAAACCAAGACTTGCCTaGGGCATCACACGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: VPSAKISCDTRTLGQSHNKPRLA*GITRPP
Trigger: TGGGGGCCGTGTGATGCCCAAGGCAAGTCTTGGTTT...GTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACTCGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp CTACTGTGGGCCGAACTCAGGAGGAGCCCTAAAGCTAAGCCCTTGGGCTTGACACGCCAGACCCTGAGGTaGCAGAAGAAGAATTGCTCC +
Preference number: 5 (lower is better)
Translates to: LLWAELRRSPKAKPLGLTRQTLR*QKKNCS
Trigger: GGAGCAATTCTTCTTCTGCAACCTCAGGGTCTGGCG...TGTCAAGCCCAAGGGCTTAGCTTTAGGGCTCCTCCTGAGTTCGGCCCACAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGGTAGAGGAGAGTAGCTCCTaGGGCATCACACGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: GHHQSQLPVPHLASLLRVEESSS*GITRPP
Trigger: TGGGGGCCGTGTGATGCCCAAGGAGCTACTCTCCTC...TACCCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS TCA 90 bp GAGCCGGCTTTGTTGAGGGGTCCACCTCCCATCAGAGTAGGTAGATaGGGCACTGATCTGTTCATTAGCAATCCGGCCAGACTCCATGCC +
Preference number: 5 (lower is better)
Translates to: EPALLRGPPPIRVGR*GTDLFISNPARLHA
Trigger: GGCATGGAGTCTGGCCGGATTGCTAATGAACAGATCAGTGCCTCATCTACCTACTCTGATGGGAGGTGGACCCCTCAACAAAGCCGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
CDS GCA 90 bp GATGGTGGGCGGGGCGATGTTCCCACAGTGTTTGCCCAGGAGGTCTaGGGATTCACTGTCCCCATCCCGAATCTCGATAAAGTCATACTT +
Preference number: 5 (lower is better)
Translates to: DGGRGDVPTVFAQEV*GFTVPIPNLDKVIL
Trigger: AAGTATGACTTTATCGAGATTCGGGATGGGGACAGTGAATCCGCAGACCTCCTGGGCAAACACTGTGGGAACATCGCCCCGCCCACCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
CDS GCA 90 bp ATCTTCAGAGCCTGTCTTGAAGATCTCGTAGCGCAGAGAGAAGCCTaGCCCCTGCCGGGCGTAGTCGGAGGTGAACTTGATGTAGAGCAT +
Preference number: 5 (lower is better)
Translates to: IFRACLEDLVAQREA*PLPGVVGGELDVEH
Trigger: ATGCTCTACATCAAGTTCACCTCCGACTACGCCCGGCAGGGGGCAGGCTTCTCTCTGCGCTACGAGATCTTCAAGACAGGCTCTGAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
CDS GCA 90 bp TCCCTGGCAGGAGGGTGCCCCCTGCAAAAGCCGAGATGGGTTCCATaGAGTTCTCCAGTGGGACATCAGTGCTTATCCGAATGTCATCAA +
Preference number: 5 (lower is better)
Translates to: SLAGGCPLQKPRWVP*SSPVGHQCLSECHQ
Trigger: TTGATGACATTCGGATAAGCACTGATGTCCCACTGGAGAACTGCATGGAACCCATCTCGGCTTTTGCAGGGGGCACCCTCCTGCCAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357118.8
CDS GCA 90 bp TGTCGGTCGAGGGGGCGCCAGACCCTGAGGTTGCAGAAGAAGAATTaGTCCAGTCCACCTCGTATTCATCTGCAAAAGCCGAGATGGGTT +
Preference number: 5 (lower is better)
Translates to: CRSRGRQTLRLQKKN*SSPPRIHLQKPRWV
Trigger: AACCCATCTCGGCTTTTGCAGATGAATACGAGGTGGACTGGAGCAATTCTTCTTCTGCAACCTCAGGGTCTGGCGCCCCCTCGACCGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412873.2
CDS GCA 90 bp ATACAGGCCCCCAAACAGCCTGTGGGTGCCCAGGATTTGCATTTCTaGAAGTGGCTGGAGGGAGGAGTCAAGGGAAGTTCACCAGAGATG +
Preference number: 5 (lower is better)
Translates to: IQAPKQPVGAQDLHF*KWLEGGVKGSSPEM
Trigger: CATCTCTGGTGAACTTCCCTTGACTCCTCCCTCCAGCCACTTGCAGAAATGCAAATCCTGGGCACCCACAGGCTGTTTGGGGGCCTGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464003.1
CDS CCA 90 bp GTTACAGAGGCCTCCAAGAACAGCCTACCTTTGGCTGCTGGGTCCTaGGGTCCTGAATGTATTCCCAGTCCTTGCCGTTTAGGCTGTAGG +
Preference number: 5 (lower is better)
Translates to: VTEASKNSLPLAAGS*GPECIPSPCRLGCR
Trigger: CCTACAGCCTAAACGGCAAGGACTGGGAATACATTCAGGACCCCAGGACCCAGCAGCCAAAGGTAGGCTGTTCTTGGAGGCCTCTGTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417189.5
ENST00000478054.1
CDS CCA 90 bp TTTTGTCCTTTGGCTGCAGGAGTCCAGCAGTACCACAGTGGCCTCTaGTTTCTGCCCACAGCTTCTATACAGGCCCCCAAACAGCCTGTG +
Preference number: 5 (lower is better)
Translates to: FCPLAAGVQQYHSGL*FLPTASIQAPKQPV
Trigger: CACAGGCTGTTTGGGGGCCTGTATAGAAGCTGTGGGCAGAAACCAGAGGCCACTGTGGTACTGCTGGACTCCTGCAGCCAAAGGACAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464003.1
CDS-3UTR CAA 90 bp ATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGGCACGGTGGGTCTGGTaGGCCTCTCACTTGGTGTCT +
Preference number: 5 (lower is better)
Translates to: MGHHQSQLPVPHLASLLRARWVW*ASHLVS
Trigger: AGACACCAAGTGAGAGGCCAACCAGACCCACCGTGC...CCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CAA 90 bp AGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGAGTTCACACAGAATCCAGCCAATCGTACTaGCAGTCCCCCTCTCCCACC +
Preference number: 5 (lower is better)
Translates to: RVLRVGDPGKRCLRVHTESSQSY*QSPSPT
Trigger: GGTGGGAGAGGGGGACTGCAAGTACGATTGGCTGGA...TTCTGTGTGAACTCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp TGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGTCCAGCCAATCGTACTaGCAGTCCCCCTCTCCCACC +
Preference number: 5 (lower is better)
Translates to: WLGLIRVLRVGDPGKRCLSSQSY*QSPSPT
Trigger: GGTGGGAGAGGGGGACTGCAAGTACGATTGGCTGGA...CAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp AGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGAGTTCACACAGAATTGGGGGTCCAGCCATaGTCATCACCATGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: RVLRVGDPGKRCLRVHTELGVQP*SSPWSR
Trigger: CCGGCTCCATGGTGATGACAATGGCTGGACCCCCAA...TTCTGTGTGAACTCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGTTGGGGGTCCAGCCATaGTCATCACCATGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: DGTSSVSTPCTTLSLPVELGVQP*SSPWSR
Trigger: CCGGCTCCATGGTGATGACAATGGCTGGACCCCCAA...CTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CAA 90 bp CTTCCCCTCACGTCTCCTGGCAGACTGCCCACTGAGAGGAGGTATGGGATAAGGTTGTTGGAATCCAAGTaGGGGGTCCAGCCATTGTCA +
Preference number: 5 (lower is better)
Translates to: LPLTSPGRLPTERRYGIRLLESK*GVQPLS
Trigger: TGACAATGGCTGGACCCCCAACTTGGATTCCAACAA...CCTTATCCCATACCTCCTCTCAGTGGGCAGTCTGCCAGGAGACGTGAGGGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGAGCATCCCCAGCATGTaGGAGCAGGGAGCATCTGTG +
Preference number: 5 (lower is better)
Translates to: EQNQLSLELWSAWGWISSSIPSM*EQGASV
Trigger: CACAGATGCTCCCTGCTCCAACATGCTGGGGATGCT...CGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GCCACACCTCTATGGGGCACCTACAGGAATGTCAATCATTTCGCAGGCATGCCTGTCTCTACCGTGGGCTaGGAGTCTGTCCAGTCACAG +
Preference number: 5 (lower is better)
Translates to: ATPLWGTYRNVNHFAGMPVSTVG*ESVQSQ
Trigger: CTGTGACTGGACAGACTCCAAGCCCACGGTAGAGAC...AGGCATGCCTGCGAAATGATTGACATTCCTGTAGGTGCCCCATAGAGGTGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CAA 90 bp GAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGATGACCCACAGCAACTaGCTCTCCTGGCTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: EQNQLSLELWSAWGWISSMTHSN*LSWLAS
Trigger: GGAAGCCAGCCAGGAGAGCAAGTTGCTGTGGGTCAT...CGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCAGCTGAGCCTTGAGTaGTGGAGTGCTTGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: GWLGLIRVLRVGDPGKRCQLSLE*WSAWGW
Trigger: CCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTG...ACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp CTCTGTTCTCCTTCCCGTCCAGTGGTGACCAGTTACAATAACTCGCTGATGGGGAGTGAGTTGGGGTACTaGGGAATGGAGCCATCGGGG +
Preference number: 5 (lower is better)
Translates to: LCSPSRPVVTSYNNSLMGSELGY*GMEPSG
Trigger: CCCCGATGGCTCCATTCCCAAGTACCCCAACTCACT...CCCCATCAGCGAGTTATTGTAACTGGTCACCACTGGACGGGAAGGAGAACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GTTTTGTCCCAGCAGAGAACACAGCCCCGTTCCTGCAATGACTTAGCCACCGCGGCTAAGCCCTTGGGCTaGACAGCTCTACTTTTCACC +
Preference number: 5 (lower is better)
Translates to: VLSQQRTQPRSCNDLATAAKPLG*TALLFT
Trigger: GGTGAAAAGTAGAGCTGTCAAGCCCAAGGGCTTAGC...CGCGGTGGCTAAGTCATTGCAGGAACGGGGCTGTGTTCTCTGCTGGGACAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS TCA 90 bp CACCGCCATGTCCGTGTGAAAGGTCAGGGAGAGGATCCCCGTCGATaGACGAAGTTCAGAGGGTGTTTTGGTCCCACAGTACTTGCCAAT +
Preference number: 5 (lower is better)
Translates to: HRHVRVKGQGEDPRR*TKFRGCFGPTVLAN
Trigger: ATTGGCAAGTACTGTGGGACCAAAACACCCTCTGAACTTCGTTCATCGACGGGGATCCTCTCCCTGACCTTTCACACGGACATGGCGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
ENST00000477199.1
CDS TCA 90 bp GTACAGCCAGCTCTTTTCTTTGTCGGTCGAGGGGGCGCCAGACCCTaGGGTTGCAGAAGAAGAATTGCTCCAGTCCACCTCGTATTCATC +
Preference number: 5 (lower is better)
Translates to: VQPALFFVGRGGARP*GCRRRIAPVHLVFI
Trigger: GATGAATACGAGGTGGACTGGAGCAATTCTTCTTCTGCAACCTCAGGGTCTGGCGCCCCCTCGACCGACAAAGAAAAGAGCTGGCTGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000467850.1
CDS TCA 90 bp TGCAGCAGCTGCTGGCACGTCTTTACCCAGCCTTTCTGGGAGCTGTaGGTCTCCACAACCCAAAGAGAGTCAGGCGAAACAACATCCACA +
Preference number: 5 (lower is better)
Translates to: CSSCWHVFTQPFWEL*VSTTQRESGETTST
Trigger: TGTGGATGTTGTTTCGCCTGACTCTCTTTGGGTTGTGGAGACTCACAGCTCCCAGAAAGGCTGGGTAAAGACGTGCCAGCAGCTGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485684.5
CDS GCA 90 bp TTTCTCGTTTGTTTTGGGTGCTGTTCTTGCTTCGGCCCTCAGCAGTaGGAGCCACGGTCTTGCTCTAGCTTAATGGTTAGGGTGGGCTCC +
Preference number: 5 (lower is better)
Translates to: FLVCFGCCSCFGPQQ*EPRSCSSLMVRVGS
Trigger: GGAGCCCACCCTAACCATTAAGCTAGAGCAAGACCGTGGCTCGCACTGCTGAGGGCCGAAGCAAGAACAGCACCCAAAACAAACGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS CCA 90 bp GGCTGGAGGGAGGAGTCAAGGGAAGTTCACCAGAGATGGTGGCCTTaGATTGCACTGAGTCAGGCAAAGCTGCGGCTTGTGAGTGAAATT +
Preference number: 5 (lower is better)
Translates to: GWREESREVHQRWWP*IALSQAKLRLVSEI
Trigger: AATTTCACTCACAAGCCGCAGCTTTGCCTGACTCAGTGCAATCCAAGGCCACCATCTCTGGTGAACTTCCCTTGACTCCTCCCTCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464003.1
CDS-3UTR CAA 90 bp TACCCCAGGAGAAGTAACATAAGAGTTAAAGGGGCCCTCTCTGAACACTCACCCGCACGGTGGGTCTGGTaGGCCTCTCACTTGGTGTCT +
Preference number: 5 (lower is better)
Translates to: YPRRSNIRVKGALSEHSPARWVW*ASHLVS
Trigger: AGACACCAAGTGAGAGGCCAACCAGACCCACCGTGC...GGGTGAGTGTTCAGAGAGGGCCCCTTTAACTCTTATGTTACTTCTCCTGGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGTTGGTCCCACAGTACTaGCCAATCAGGGGGCCAACA +
Preference number: 5 (lower is better)
Translates to: EQNQLSLELWSAWGWISSLVPQY*PIRGPT
Trigger: TGTTGGCCCCCTGATTGGCAAGTACTGTGGGACCAA...CGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp CATTCACCCTTCCCCTTTCACCTGGGTATAAGACAAATGAAATCGTGGGTGACCGCAGAGAAGCCATCCTaGGCCACCGCCATGTCCGTG +
Preference number: 5 (lower is better)
Translates to: HSPFPFHLGIRQMKSWVTAEKPS*ATAMSV
Trigger: CACGGACATGGCGGTGGCCAAGGATGGCTTCTCTGC...GGTCACCCACGATTTCATTTGTCTTATACCCAGGTGAAAGGGGAAGGGTGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp TACCCCAGGAGAAGTAACATAAGAGTTAAAGGGGCCCTCTCTGAACACTCACCCATGGAGCCGGCTTTGTaGAGGGGTCCACCTCCCATC +
Preference number: 5 (lower is better)
Translates to: YPRRSNIRVKGALSEHSPMEPAL*RGPPPI
Trigger: GATGGGAGGTGGACCCCTCAACAAAGCCGGCTCCAT...GGGTGAGTGTTCAGAGAGGGCCCCTTTAACTCTTATGTTACTTCTCCTGGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp CTACTGTGGGCCGAACTCAGGAGGAGCCCTAAAGCTAAGCCCTTGGGCTTGACATTGTTGGAATCCAAGTaGGGGGTCCAGCCATTGTCA +
Preference number: 5 (lower is better)
Translates to: LLWAELRRSPKAKPLGLTLLESK*GVQPLS
Trigger: TGACAATGGCTGGACCCCCAACTTGGATTCCAACAA...TGTCAAGCCCAAGGGCTTAGCTTTAGGGCTCCTCCTGAGTTCGGCCCACAGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GTTTTGTCCCAGCAGAGAACACAGCCCCGTTCCTGCAATGACTTAGCCACCGCGTGGAGATACTCCTTGTaGGAATCCAAGTTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: VLSQQRTQPRSCNDLATAWRYSL*ESKLGV
Trigger: GACCCCCAACTTGGATTCCAACAAGGAGTATCTCCA...CGCGGTGGCTAAGTCATTGCAGGAACGGGGCTGTGTTCTCTGCTGGGACAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp AGAAAGCAACCCTGTGGCCCTGTTGACCACCTAGTCCGGGAGAGTGTGGAGGTAACCTGGAGATACTCCTaGTTGGAATCCAAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: RKQPCGPVDHLVRESVEVTWRYS*LESKLG
Trigger: CCCCAACTTGGATTCCAACAAGGAGTATCTCCAGGT...TACCTCCACACTCTCCCGGACTAGGTGGTCAACAGGGCCACAGGGTTGCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp TGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGGTCTCTACCGTGGGCTaGGAGTCTGTCCAGTCACAG +
Preference number: 5 (lower is better)
Translates to: WLGLIRVLRVGDPGKRCLVSTVG*ESVQSQ
Trigger: CTGTGACTGGACAGACTCCAAGCCCACGGTAGAGAC...CAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GTTTTGTCCCAGCAGAGAACACAGCCCCGTTCCTGCAATGACTTAGCCACCGCGGGGAGCTGCAAATCTTaGTCATCCTCAAAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: VLSQQRTQPRSCNDLATAGSCKS*SSSKLQ
Trigger: CTGCAGCTTTGAGGATGACAAAGATTTGCAGCTCCC...CGCGGTGGCTAAGTCATTGCAGGAACGGGGCTGTGTTCTCTGCTGGGACAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GAGTGGCTTTCAAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGAAACGGCTACACCCGCTaGGCCAGCCTCTCGAGGGGA +
Preference number: 5 (lower is better)
Translates to: EWLSNLPSSAGYFWKSLGNGYTR*ASLSRG
Trigger: TCCCCTCGAGAGGCTGGCCAAGCGGGTGTAGCCGTT...TCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GTCCAGGCGCTTCTATGGATTTTGACGTGTGAAGTTTCCTTTCCAGTTTGTTTTCATCCCGCGGCACCCTaGACGGACACACGGGCGGAG +
Preference number: 5 (lower is better)
Translates to: VQALLWILTCEVSFPVCFHPAAP*TDTRAE
Trigger: CTCCGCCCGTGTGTCCGTCAAGGGTGCCGCGGGATG...AAAACAAACTGGAAAGGAAACTTCACACGTCAAAATCCATAGAAGCGCCTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS GCA 90 bp CCGGAACGTCCTTTCCCTATCACTCCCTCGAACACAATCCATCTGTaGCTCAGTCTCCTGCTCTGTGGGGCAGAGATAACAGAACTCCAT +
Preference number: 5 (lower is better)
Translates to: PERPFPITPSNTIHL*LSLLLCGAEITELH
Trigger: ATGGAGTTCTGTTATCTCTGCCCCACAGAGCAGGAGACTGAGGCACAGATGGATTGTGTTCGAGGGAGTGATAGGGAAAGGACGTTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467850.1
CDS CCA 90 bp AAAAGCGCAGGTCCACCTGGAGATACTCCTTGTTGGAATCCAAGTTaGGGGTCCAGCCATTGTCATCACCATGGAGCCGGCTTTGTTGAG +
Preference number: 5 (lower is better)
Translates to: KSAGPPGDTPCWNPS*GSSHCHHHGAGFVE
Trigger: CTCAACAAAGCCGGCTCCATGGTGATGACAATGGCTGGACCCCCAACTTGGATTCCAACAAGGAGTATCTCCAGGTGGACCTGCGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
CDS CCA 90 bp GGTGCCCCCTGCAAAAGCCGAGATGGGTTCCATGCAGTTCTCCAGTaGGACATCAGTGCTTATCCGAATGTCATCAATGGCAATCTCTCC +
Preference number: 5 (lower is better)
Translates to: GAPCKSRDGFHAVLQ*DISAYPNVINGNLS
Trigger: GGAGAGATTGCCATTGATGACATTCGGATAAGCACTGATGTCCCACTGGAGAACTGCATGGAACCCATCTCGGCTTTTGCAGGGGGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357118.8
CDS-3UTR CAA 90 bp CTCAAGGCTGAAGCAGCATGGTTAAGCATTCTTGTCCACAGTACTTGCGGACTTGCACGGTGGGTCTGGTaGGCCTCTCACTTGGTGTCT +
Preference number: 5 (lower is better)
Translates to: LKAEAAWLSILVHSTCGLARWVW*ASHLVS
Trigger: AGACACCAAGTGAGAGGCCAACCAGACCCACCGTGC...AAGTCCGCAAGTACTGTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp ATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGATGTTCCCACAGTGTTaGCCCAGGAGGTCTGCGGAT +
Preference number: 5 (lower is better)
Translates to: MGHHQSQLPVPHLASLLRMFPQC*PRRSAD
Trigger: ATCCGCAGACCTCCTGGGCAAACACTGTGGGAACAT...CCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CAA 90 bp ATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGTTGGTCCCACAGTACTaGCCAATCAGGGGGCCAACA +
Preference number: 5 (lower is better)
Translates to: MGHHQSQLPVPHLASLLRLVPQY*PIRGPT
Trigger: TGTTGGCCCCCTGATTGGCAAGTACTGTGGGACCAA...CCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CAA 90 bp CAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCAAGTTCAGAGGGTGTTTaGGTCCCACAGTACTTGCCA +
Preference number: 5 (lower is better)
Translates to: QLSLELWSAWGWISSDSPSSEGV*VPQYLP
Trigger: TGGCAAGTACTGTGGGACCAAAACACCCTCTGAACT...TGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GTGCCGAGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACAGTTCAGAGGGTGTTTaGGTCCCACAGTACTTGCCA +
Preference number: 5 (lower is better)
Translates to: VPSAKISCDTRTLGQSHNSSEGV*VPQYLP
Trigger: TGGCAAGTACTGTGGGACCAAAACACCCTCTGAACT...GTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACTCGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GCAGGACTCATTCCTTTAATAGGATCAGCAGTGAGTTGGGGTACTTGGGAATGGATGGAGCCGGCTTTGTaGAGGGGTCCACCTCCCATC +
Preference number: 5 (lower is better)
Translates to: AGLIPLIGSAVSWGTWEWMEPAL*RGPPPI
Trigger: GATGGGAGGTGGACCCCTCAACAAAGCCGGCTCCAT...CCATTCCCAAGTACCCCAACTCACTGCTGATCCTATTAAAGGAATGAGTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GTTGTACATAACTTAGAGGTGAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAACCATGGAGCCGGCTTaGTTGAGGGGTCCACCTCCC +
Preference number: 5 (lower is better)
Translates to: VVHNLEVKCRSETGLDFGTMEPA*LRGPPP
Trigger: GGGAGGTGGACCCCTCAACAAAGCCGGCTCCATGGT...TCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTCACCTCTAAGTTATGTACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GTTTTGTCCCAGCAGAGAACACAGCCCCGTTCCTGCAATGACTTAGCCACCGCGAATACCTTGTGGTTTTaGCCATGCCGGTACACCATC +
Preference number: 5 (lower is better)
Translates to: VLSQQRTQPRSCNDLATANTLWF*PCRYTI
Trigger: GATGGTGTACCGGCATGGCAAAAACCACAAGGTATT...CGCGGTGGCTAAGTCATTGCAGGAACGGGGCTGTGTTCTCTGCTGGGACAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp CATTCACCCTTCCCCTTTCACCTGGGTATAAGACAAATGAAATCGTGGGTGACCTCCCTTCGAACAGCTTaGGCTGCTGGGTCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: HSPFPFHLGIRQMKSWVTSLRTA*AAGSWG
Trigger: ACCCCAGGACCCAGCAGCCAAAGCTGTTCGAAGGGA...GGTCACCCACGATTTCATTTGTCTTATACCCAGGTGAAAGGGGAAGGGTGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp TCAAGTTCCCGTGATCTGGCTCAGCCAGTGAATGGTCGAATACCTCTAACTGCAGTCTCTACCGTGGGCTaGGAGTCTGTCCAGTCACAG +
Preference number: 5 (lower is better)
Translates to: SSSRDLAQPVNGRIPLTAVSTVG*ESVQSQ
Trigger: CTGTGACTGGACAGACTCCAAGCCCACGGTAGAGAC...TGCAGTTAGAGGTATTCGACCATTCACTGGCTGAGCCAGATCACGGGAACTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp CTACTGTGGGCCGAACTCAGGAGGAGCCCTAAAGCTAAGCCCTTGGGCTTGACAAAATCGAAGTTGCAATaGAATCCCGAAGGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: LLWAELRRSPKAKPLGLTKSKLQ*NPEGSC
Trigger: GCAGCTCCCTTCGGGATTCAATTGCAACTTCGATTT...TGTCAAGCCCAAGGGCTTAGCTTTAGGGCTCCTCCTGAGTTCGGCCCACAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GCAAACCCTGAAAAAGTTAACCTGCTATGTGACAGGTTAACTCTTTCCCTTGTTCATCCCGCGGCACCCTaGACGGACACACGGGCGGAG +
Preference number: 5 (lower is better)
Translates to: ANPEKVNLLCDRLTLSLVHPAAP*TDTRAE
Trigger: CTCCGCCCGTGTGTCCGTCAAGGGTGCCGCGGGATG...AACAAGGGAAAGAGTTAACCTGTCACATAGCAGGTTAACTTTTTCAGGGTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp TTTATTGGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCCATCCCGCGGCACCCTaGACGGACACACGGGCGGAG +
Preference number: 5 (lower is better)
Translates to: FIGFQELDDDCLDGTSSVHPAAP*TDTRAE
Trigger: CTCCGCCCGTGTGTCCGTCAAGGGTGCCGCGGGATG...GACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCCAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CAA 90 bp CCACCAGACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGAGCCAGCTCTTTTCTTaGTCGGTCGAGGGGGCGCCA +
Preference number: 5 (lower is better)
Translates to: PPDTVGLELANGSYSLTKSQLFS*SVEGAP
Trigger: TGGCGCCCCCTCGACCGACAAAGAAAAGAGCTGGCT...CTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTCTGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp CTCTGTTCTCCTTCCCGTCCAGTGGTGACCAGTTACAATAACTCGCTGATGGGGAGGATCAGCAGTGAGTaGGGGTACTTGGGAATGGAG +
Preference number: 5 (lower is better)
Translates to: LCSPSRPVVTSYNNSLMGRISSE*GYLGME
Trigger: CTCCATTCCCAAGTACCCCAACTCACTGCTGATCCT...CCCCATCAGCGAGTTATTGTAACTGGTCACCACTGGACGGGAAGGAGAACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp AGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACACCACCGCTAAGCCCTTGGGCTaGACAGCTCTACTTTTCACC +
Preference number: 5 (lower is better)
Translates to: SAKISCDTRTLGQSHNTTAKPLG*TALLFT
Trigger: GGTGAAAAGTAGAGCTGTCAAGCCCAAGGGCTTAGC...GGTGGTGTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GTGCCGAGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACCCTAAAGCTAAGCCCTaGGGCTTGACAGCTCTACTT +
Preference number: 5 (lower is better)
Translates to: VPSAKISCDTRTLGQSHNPKAKP*GLTALL
Trigger: AAGTAGAGCTGTCAAGCCCAAGGGCTTAGCTTTAGG...GTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACTCGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS TCA 90 bp CATTCTGTGTTTCCCTGGAAATCGCTCCCTGTGTTGCGATGGCCGTaGGCATGGTTAAAAAGCGCAGGTCCACCTGGAGATACTCCTTGT +
Preference number: 5 (lower is better)
Translates to: HSVFPWKSLPVLRWP*AWLKSAGPPGDTPC
Trigger: ACAAGGAGTATCTCCAGGTGGACCTGCGCTTTTTAACCATGCTCACGGCCATCGCAACACAGGGAGCGATTTCCAGGGAAACACAGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
CDS GCA 90 bp GGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTCTTaGTTCGGCCCTCAGCAGTGCGAGCCACGGTCTTGCTCTAGCTTA +
Preference number: 5 (lower is better)
Translates to: GNMFAVFLVCFGCCS*FGPQQCEPRSCSSL
Trigger: TAAGCTAGAGCAAGACCGTGGCTCGCACTGCTGAGGGCCGAAGCAAGAACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS GCA 90 bp GGGCGTGTGCATCTCATGGATGGGATACACAGTGGGACAGGACGGTaGTTACTTGCAGTCGTGCTTCTCGATTTCAAAGTGAGGGTTGAA +
Preference number: 5 (lower is better)
Translates to: GRVHLMDGIHSGTGR*LLAVVLLDFKVRVE
Trigger: TTCAACCCTCACTTTGAAATCGAGAAGCACGACTGCAAGTAAGCACCGTCCTGTCCCACTGTGTATCCCATCCATGAGATGCACACGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478013.1
CDS CCA 90 bp CATCTTGGGTTTGGCCAGGATGGTAAAGGTGCAGTCCAAGTTGTGTaGATACTTCTCAGGAAACCCAGGAGATTCGATGGTCCCGTTGGG +
Preference number: 5 (lower is better)
Translates to: HLGFGQDGKGAVQVV*ILLRKPRRFDGPVG
Trigger: CCCAACGGGACCATCGAATCTCCTGGGTTTCCTGAGAAGTATCCACACAACTTGGACTGCACCTTTACCATCCTGGCCAAACCCAAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
ENST00000477199.1
CDS CCA 90 bp AGTGCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTaGGTGCTGTTCTTGCTTCGGCCCTCAGCAGTGCGAGCCACGGTC +
Preference number: 5 (lower is better)
Translates to: SAKSRQHVCSLSRLF*VLFLLRPSAVRATV
Trigger: GACCGTGGCTCGCACTGCTGAGGGCCGAAGCAAGAACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp AGAAGTAACATAAGAGTTAAAGGGGCCCTCTCTGAACACTCACCCCTCGCCCAAATGTTCCCACAGTGTTaGCCCAGGAGGTCTGCGGAT +
Preference number: 5 (lower is better)
Translates to: RSNIRVKGALSEHSPLAQMFPQC*PRRSAD
Trigger: ATCCGCAGACCTCCTGGGCAAACACTGTGGGAACAT...TTGGGCGAGGGGTGAGTGTTCAGAGAGGGCCCCTTTAACTCTTATGTTACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp CAGCCGCTCTCTCACACACCCACACACAGAGAGCTATTCACACACACACATGTCAGGATGATCTCCATCTaGGGTTTGGCCAGGATGGTA +
Preference number: 5 (lower is better)
Translates to: QPLSHTPTHRELFTHTHVRMISI*GLARMV
Trigger: TACCATCCTGGCCAAACCCAAGATGGAGATCATCCT...GACATGTGTGTGTGTGAATAGCTCTCTGTGTGTGGGTGTGTGAGAGAGCGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCTCAACTGCAGAGAAGCCATCCTaGGCCACCGCCATGTCCGTG +
Preference number: 5 (lower is better)
Translates to: GFQELDDDCLDGTSSVSTAEKPS*ATAMSV
Trigger: CACGGACATGGCGGTGGCCAAGGATGGCTTCTCTGC...AGTTGAGACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CAA 90 bp AGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACACCACCTTGTTGGAATCCAAGTaGGGGGTCCAGCCATTGTCA +
Preference number: 5 (lower is better)
Translates to: SAKISCDTRTLGQSHNTTLLESK*GVQPLS
Trigger: TGACAATGGCTGGACCCCCAACTTGGATTCCAACAA...GGTGGTGTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp AAACAAGCGAACCAGTCTCTGGAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTAGCATCCCCAGCATGTaGGAGCAGGGAGCATCTGTG +
Preference number: 5 (lower is better)
Translates to: KQANQSLEQNQLSLELWSSIPSM*EQGASV
Trigger: CACAGATGCTCCCTGCTCCAACATGCTGGGGATGCT...ACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAGAGACTGGTTCGCTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAGAACTGTAAAATGGCTCACTAGCATCCCCAGCATGTaGGAGCAGGGAGCATCTGTG +
Preference number: 5 (lower is better)
Translates to: EVQVRNRARLWRTVKWLTSIPSM*EQGASV
Trigger: CACAGATGCTCCCTGCTCCAACATGCTGGGGATGCT...AGTGAGCCATTTTACAGTTCTCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp CAGCCGCTCTCTCACACACCCACACACAGAGAGCTATTCACACACACACATGTCACACCTTTCACTGTCTaGGGTGTTCCCAGATCTACC +
Preference number: 5 (lower is better)
Translates to: QPLSHTPTHRELFTHTHVTPFTV*GVPRST
Trigger: GGTAGATCTGGGAACACCCAAGACAGTGAAAGGTGT...GACATGTGTGTGTGTGAATAGCTCTCTGTGTGTGGGTGTGTGAGAGAGCGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp AGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTCTGAACACTGCGCATCATGGGGTAGGGGGTGGTaGTCTCTTCGCTCTTCACAG +
Preference number: 5 (lower is better)
Translates to: RLLLEIPRTYQLSEHCASWGRGW*SLRSSQ
Trigger: CTGTGAAGAGCGAAGAGACAACCACCCCCTACCCCA...TGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGGGAGCTGCAAATCTTaGTCATCCTCAAAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: EQNQLSLELWSAWGWISSGSCKS*SSSKLQ
Trigger: CTGCAGCTTTGAGGATGACAAAGATTTGCAGCTCCC...CGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GTGCCGAGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACTCGAGGAAATCGAAGTaGCAATTGAATCCCGAAGGG +
Preference number: 5 (lower is better)
Translates to: VPSAKISCDTRTLGQSHNSRKSK*QLNPEG
Trigger: CCCTTCGGGATTCAATTGCAACTTCGATTTCCTCGA...GTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACTCGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp AAAATGAACCCAAGGAGGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGAATGACCCACAGCAACTaGCTCTCCTGGCTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: KMNPRRMVGIDKSAQGWGMTHSN*LSWLAS
Trigger: GGAAGCCAGCCAGGAGAGCAAGTTGCTGTGGGTCAT...TCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCCTCCTTGGGTTCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp CTCAAGGCTGAAGCAGCATGGTTAAGCATTCTTGTCCACAGTACTTGCGGACTTATGACCCACAGCAACTaGCTCTCCTGGCTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: LKAEAAWLSILVHSTCGLMTHSN*LSWLAS
Trigger: GGAAGCCAGCCAGGAGAGCAAGTTGCTGTGGGTCAT...AAGTCCGCAAGTACTGTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp AGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGAGTTCACACAGAAACAAGGGGGTCTTGTTaGAGTGTGCTAGGGGAACCT +
Preference number: 5 (lower is better)
Translates to: RVLRVGDPGKRCLRVHTETRGSC*SVLGEP
Trigger: AGGTTCCCCTAGCACACTCAAACAAGACCCCCTTGT...TTCTGTGTGAACTCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CAA 90 bp GATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGCACTTAGCCTCCCTGTaGAGGGTAACGTTACAGAGG +
Preference number: 5 (lower is better)
Translates to: DGTSSVSTPCTTLSLPVEHLASL*RVTLQR
Trigger: CCTCTGTAACGTTACCCTCAACAGGGAGGCTAAGTG...CTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS TCA 90 bp GTGGCCTTGGATTGCACTGAGTCAGGCAAAGCTGCGGCTTGTGAGTaGAATTTTCCAAGCAGACAGCAAGTTGCAGTCGTGCTTCTCGAT +
Preference number: 5 (lower is better)
Translates to: VALDCTESGKAAACE*NFPSRQQVAVVLLD
Trigger: ATCGAGAAGCACGACTGCAACTTGCTGTCTGCTTGGAAAATTTCACTCACAAGCCGCAGCTTTGCCTGACTCAGTGCAATCCAAGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464003.1
CDS TCA 90 bp TTCCTAACTTCCTTCTCTTACAAGCAGCCTGCCACCGTACCTCACTaGGGTATGGTGACTGCAGGTACTGACTGCAGGCTGTACACAGAA +
Preference number: 5 (lower is better)
Translates to: FLTSFSYKQPATVPH*GMVTAGTDCRLYTE
Trigger: TTCTGTGTACAGCCTGCAGTCAGTACCTGCAGTCACCATACCTCAGTGAGGTACGGTGGCAGGCTGCTTGTAAGAGAAGGAAGTTAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485684.5
CDS GCA 90 bp CCTTGTCAGCAGTGGAGCGTGGAGCTTGTTCAGAACCACCTCAGTTaGATCGTTGTTGGCTTGAAATACCTTGTGGTTTTTGCCATGCCG +
Preference number: 5 (lower is better)
Translates to: PCQQWSVELVQNHLS*IVVGLKYLVVFAMP
Trigger: CGGCATGGCAAAAACCACAAGGTATTTCAAGCCAACAACGATGCAACTGAGGTGGTTCTGAACAAGCTCCACGCTCCACTGCTGACAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
CDS CCA 90 bp CCCTGGAACTGCAAAAGCCGAGATGGGTTCCATGCAGTTCTCCAGTaGGACATCAGTGCTTATCCGAATGTCATCAATGGCAATCTCTCC +
Preference number: 5 (lower is better)
Translates to: PWNCKSRDGFHAVLQ*DISAYPNVINGNLS
Trigger: GGAGAGATTGCCATTGATGACATTCGGATAAGCACTGATGTCCCACTGGAGAACTGCATGGAACCCATCTCGGCTTTTGCAGTTCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485684.5
CDS-3UTR CAA 90 bp GTGCCGAGTGCCAAGATCAGCTGTGACACTCGGACCCTAGGTCAAAGTCACAACCTCTCACTTGGTGTCTaGAAAAGTAGAGGGCTAAGA +
Preference number: 5 (lower is better)
Translates to: VPSAKISCDTRTLGQSHNLSLGV*KSRGLR
Trigger: TCTTAGCCCTCTACTTTTCAAGACACCAAGTGAGAG...GTTGTGACTTTGACCTAGGGTCCGAGTGTCACAGCTGATCTTGGCACTCGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GTGCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTGCACGGTGGGTCTGGTaGGCCTCTCACTTGGTGTCT +
Preference number: 5 (lower is better)
Translates to: VQNRGNMFAVFLVCFGCCARWVW*ASHLVS
Trigger: AGACACCAAGTGAGAGGCCAACCAGACCCACCGTGC...ACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp AAAATGAACCCAAGGAGGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGAATGTTCCCACAGTGTTaGCCCAGGAGGTCTGCGGAT +
Preference number: 5 (lower is better)
Translates to: KMNPRRMVGIDKSAQGWGMFPQC*PRRSAD
Trigger: ATCCGCAGACCTCCTGGGCAAACACTGTGGGAACAT...TCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCCTCCTTGGGTTCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp AGGAGAAGTAACATAAGAGTTAAAGGGGCCCTCTCTGAACACTCACCCCTCGCCATCTCCATCTTGGGTTaGGCCAGGATGGTAAAGGTG +
Preference number: 5 (lower is better)
Translates to: RRSNIRVKGALSEHSPLAISILG*ARMVKV
Trigger: CACCTTTACCATCCTGGCCAAACCCAAGATGGAGAT...GGCGAGGGGTGAGTGTTCAGAGAGGGCCCCTTTAACTCTTATGTTACTTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGGTAATCTCCATCTTGGGTTaGGCCAGGATGGTAAAGGTG +
Preference number: 5 (lower is better)
Translates to: GHHQSQLPVPHLASLLRVISILG*ARMVKV
Trigger: CACCTTTACCATCCTGGCCAAACCCAAGATGGAGAT...TACCCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CAA 90 bp GGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCTCAACTTCCAGCCAATCGTACTaGCAGTCCCCCTCTCCCACC +
Preference number: 5 (lower is better)
Translates to: GFQELDDDCLDGTSSVSTSSQSY*QSPSPT
Trigger: GGTGGGAGAGGGGGACTGCAAGTACGATTGGCTGGA...AGTTGAGACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CAA 90 bp CCACCAGACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGTTGGTCCCACAGTACTaGCCAATCAGGGGGCCAACA +
Preference number: 5 (lower is better)
Translates to: PPDTVGLELANGSYSLTKLVPQY*PIRGPT
Trigger: TGTTGGCCCCCTGATTGGCAAGTACTGTGGGACCAA...CTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTCTGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCTCAACTATGGAGCCGGCTTTGTaGAGGGGTCCACCTCCCATC +
Preference number: 5 (lower is better)
Translates to: GFQELDDDCLDGTSSVSTMEPAL*RGPPPI
Trigger: GATGGGAGGTGGACCCCTCAACAAAGCCGGCTCCAT...AGTTGAGACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CAA 90 bp GTGCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTTGGGGGTCCAGCCATaGTCATCACCATGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: VQNRGNMFAVFLVCFGCCLGVQP*SSPWSR
Trigger: CCGGCTCCATGGTGATGACAATGGCTGGACCCCCAA...ACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTTTGTTGGAATCCAAGTaGGGGGTCCAGCCATTGTCA +
Preference number: 5 (lower is better)
Translates to: GWLGLIRVLRVGDPGKRCLLESK*GVQPLS
Trigger: TGACAATGGCTGGACCCCCAACTTGGATTCCAACAA...ACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp ATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGTTGTTGGAATCCAAGTaGGGGGTCCAGCCATTGTCA +
Preference number: 5 (lower is better)
Translates to: MGHHQSQLPVPHLASLLRLLESK*GVQPLS
Trigger: TGACAATGGCTGGACCCCCAACTTGGATTCCAACAA...CCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CAA 90 bp CAAGCGAACCAGTCTCTGGAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTTGGAGATACTCCTTGTaGGAATCCAAGTTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: QANQSLEQNQLSLELWSAWRYSL*ESKLGV
Trigger: GACCCCCAACTTGGATTCCAACAAGGAGTATCTCCA...AGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAGAGACTGGTTCGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGAGTTCACACTGGAGATACTCCTTGTaGGAATCCAAGTTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: DKSAQGWGSGKEMSESSHWRYSL*ESKLGV
Trigger: GACCCCCAACTTGGATTCCAACAAGGAGTATCTCCA...GTGTGAACTCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp CAGCCGCTCTCTCACACACCCACACACAGAGAGCTATTCACACACACACATGTCTCAGAACCACCTCAGTaGCATCGTTGTTGGCTTGAA +
Preference number: 5 (lower is better)
Translates to: QPLSHTPTHRELFTHTHVSEPPQ*HRCWLE
Trigger: TTCAAGCCAACAACGATGCAACTGAGGTGGTTCTGA...GACATGTGTGTGTGTGAATAGCTCTCTGTGTGTGGGTGTGTGAGAGAGCGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGGTAACACCTTTCACTGTCTaGGGTGTTCCCAGATCTACC +
Preference number: 5 (lower is better)
Translates to: GHHQSQLPVPHLASLLRVTPFTV*GVPRST
Trigger: GGTAGATCTGGGAACACCCAAGACAGTGAAAGGTGT...TACCCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CAA 90 bp GTTGTACATAACTTAGAGGTGAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAGTCTCTACCGTGGGCTaGGAGTCTGTCCAGTCACAG +
Preference number: 5 (lower is better)
Translates to: VVHNLEVKCRSETGLDFGVSTVG*ESVQSQ
Trigger: CTGTGACTGGACAGACTCCAAGCCCACGGTAGAGAC...TCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTCACCTCTAAGTTATGTACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp AAACAAGCGAACCAGTCTCTGGAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGTGGTCCGGAGCCACTaGGCATGGTCATACATCCAA +
Preference number: 5 (lower is better)
Translates to: KQANQSLEQNQLSLELWSVVRSH*AWSYIQ
Trigger: TTGGATGTATGACCATGCCAAGTGGCTCCGGACCAC...ACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAGAGACTGGTTCGCTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GCAGGACTCATTCCTTTAATAGGATCAGCAGTGAGTTGGGGTACTTGGGAATGGGTGGTCCGGAGCCACTaGGCATGGTCATACATCCAA +
Preference number: 5 (lower is better)
Translates to: AGLIPLIGSAVSWGTWEWVVRSH*AWSYIQ
Trigger: TTGGATGTATGACCATGCCAAGTGGCTCCGGACCAC...CCATTCCCAAGTACCCCAACTCACTGCTGATCCTATTAAAGGAATGAGTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GTTGTACATAACTTAGAGGTGAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAATGACCCACAGCAACTaGCTCTCCTGGCTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: VVHNLEVKCRSETGLDFGMTHSN*LSWLAS
Trigger: GGAAGCCAGCCAGGAGAGCAAGTTGCTGTGGGTCAT...TCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTCACCTCTAAGTTATGTACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp AGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCAAGATGCAGCATTAGAAGACAAGGGGGTCTaGTTTGAGTGTGCTAGGGGA +
Preference number: 5 (lower is better)
Translates to: SCGVLGGGSLRIVQDAALEDKGV*FECARG
Trigger: TCCCCTAGCACACTCAAACAAGACCCCCTTGTCTTC...TAATGCTGCATCTTGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CAA 90 bp GAGAAAGCGGAGAATAATGATCACTGCTCCACTTCTATTCTGGAAAAGTCATTCAACGGCTACACCCGCTaGGCCAGCCTCTCGAGGGGA +
Preference number: 5 (lower is better)
Translates to: EKAENNDHCSTSILEKSFNGYTR*ASLSRG
Trigger: TCCCCTCGAGAGGCTGGCCAAGCGGGTGTAGCCGTT...GAATGACTTTTCCAGAATAGAAGTGGAGCAGTGATCATTATTCTCCGCTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGGTACTGAGTCCTGGTGGCTaGTCTTCACCTCTATTCTTG +
Preference number: 5 (lower is better)
Translates to: GHHQSQLPVPHLASLLRVLSPGG*SSPLFL
Trigger: CAAGAATAGAGGTGAAGACAAGCCACCAGGACTCAG...TACCCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CAA 90 bp GAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAGAACTGTAAAATGGCTCACTCGCCAGACCCTGAGGTaGCAGAAGAAGAATTGCTCC +
Preference number: 5 (lower is better)
Translates to: EVQVRNRARLWRTVKWLTRQTLR*QKKNCS
Trigger: GGAGCAATTCTTCTTCTGCAACCTCAGGGTCTGGCG...AGTGAGCCATTTTACAGTTCTCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGCACTTTAGCCAGCTCTTTTCTTaGTCGGTCGAGGGGGCGCCA +
Preference number: 5 (lower is better)
Translates to: DTVGLELANGSYSLTKHFSQLFS*SVEGAP
Trigger: TGGCGCCCCCTCGACCGACAAAGAAAAGAGCTGGCT...AAAGTGCTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GAGTGGCTTTCAAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGATGGCAGCTTGTAGGGTaGGCTGGCAGAACCTACACC +
Preference number: 5 (lower is better)
Translates to: EWLSNLPSSAGYFWKSLGWQLVG*AGRTYT
Trigger: GGTGTAGGTTCTGCCAGCCAACCCTACAAGCTGCCA...TCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS TCA 90 bp ATCGCTGGCTTTCGGGTCAGGCTTTGGTCTCATCCTTCCCAGGCATaGAAGCCAAGTCTGCCAGTGGTTCCCATAGTAAGCAATTATGAA +
Preference number: 5 (lower is better)
Translates to: IAGFRVRLWSHPSQA*KPSLPVVPIVSNYE
Trigger: TTCATAATTGCTTACTATGGGAACCACTGGCAGACTTGGCTTTCATGCCTGGGAAGGATGAGACCAAAGCCTGACCCGAAAGCCAGCGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468256.1
CDS GCA 90 bp CAAAAGCCGAGATGGGTTCCATGCAGTTCTCCAGTGGGACATCAGTaGTTATCCGAATGTCATCAATGGCAATCTCTCCGGAACGTCCTT +
Preference number: 5 (lower is better)
Translates to: QKPRWVPCSSPVGHQ*LSECHQWQSLRNVL
Trigger: AAGGACGTTCCGGAGAGATTGCCATTGATGACATTCGGATAAGCACTGATGTCCCACTGGAGAACTGCATGGAACCCATCTCGGCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000467850.1
ENST00000472299.5
ENST00000485684.5
CDS GCA 90 bp ATCAGCCTCTTCTGTCCACCTCGGAGAGCAGACAAATGTGAAAATTaGTGTTCCCTAAATGCCAGAGAAGAATGTCTCCCCAGTGCCCTG +
Preference number: 5 (lower is better)
Translates to: ISLFCPPRRADKCEN*CSLNAREECLPSAL
Trigger: CAGGGCACTGGGGAGACATTCTTCTCTGGCATTTAGGGAACAGCAATTTTCACATTTGTCTGCTCTCCGAGGTGGACAGAAGAGGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468256.1
CDS GCA 90 bp CCTTGTCAGCAGTGGAGCGTGGAGCTTGTTCAGAACCACCTCAGTTaGATCGTTGTTGGCTTGAAATACAATGGCCCTGTGTCAATCAAC +
Preference number: 5 (lower is better)
Translates to: PCQQWSVELVQNHLS*IVVGLKYNGPVSIN
Trigger: GTTGATTGACACAGGGCCATTGTATTTCAAGCCAACAACGATGCAACTGAGGTGGTTCTGAACAAGCTCCACGCTCCACTGCTGACAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478054.1
CDS CCA 90 bp TGCAGTTCTCCAGTGGGACATCAGTGCTTATCCGAATGTCATCAATaGCAATCTCTCCGGAACGTCCTTTCCCTATCACTCCCTCGAACA +
Preference number: 5 (lower is better)
Translates to: CSSPVGHQCLSECHQ*QSLRNVLSLSLPRT
Trigger: TGTTCGAGGGAGTGATAGGGAAAGGACGTTCCGGAGAGATTGCCATTGATGACATTCGGATAAGCACTGATGTCCCACTGGAGAACTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000467850.1
ENST00000472299.5
ENST00000485684.5
CDS CCA 90 bp GATGTCCACTGCAAAAGCCGAGATGGGTTCCATGCAGTTCTCCAGTaGGACATCAGTGCTTATCCGAATGTCATCAATGGCAATCTCTCC +
Preference number: 5 (lower is better)
Translates to: DVHCKSRDGFHAVLQ*DISAYPNVINGNLS
Trigger: GGAGAGATTGCCATTGATGACATTCGGATAAGCACTGATGTCCCACTGGAGAACTGCATGGAACCCATCTCGGCTTTTGCAGTGGACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000467850.1
CDS-3UTR CAA 90 bp AATGTCAATCATTTCGCAGGCATGCCTGGCCCCAAATGCATGACTGGATGTGGAAGGATGATCTCCATCTaGGGTTTGGCCAGGATGGTA +
Preference number: 5 (lower is better)
Translates to: NVNHFAGMPGPKCMTGCGRMISI*GLARMV
Trigger: TACCATCCTGGCCAAACCCAAGATGGAGATCATCCT...TCCACATCCAGTCATGCATTTGGGGCCAGGCATGCCTGCGAAATGATTGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CAA 90 bp CAAAGACACCAGAAGACAAGGGGGTCTTGTTTGAGTGTGCTAGGGGAACCTTCTAGTTCAGAGGGTGTTTaGGTCCCACAGTACTTGCCA +
Preference number: 5 (lower is better)
Translates to: QRHQKTRGSCLSVLGEPSSSEGV*VPQYLP
Trigger: TGGCAAGTACTGTGGGACCAAAACACCCTCTGAACT...AGAAGGTTCCCCTAGCACACTCAAACAAGACCCCCTTGTCTTCTGGTGTCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CAA 90 bp GTCCAGGCGCTTCTATGGATTTTGACGTGTGAAGTTTCCTTTCCAGTTTGTTTTATGGAGCCGGCTTTGTaGAGGGGTCCACCTCCCATC +
Preference number: 5 (lower is better)
Translates to: VQALLWILTCEVSFPVCFMEPAL*RGPPPI
Trigger: GATGGGAGGTGGACCCCTCAACAAAGCCGGCTCCAT...AAAACAAACTGGAAAGGAAACTTCACACGTCAAAATCCATAGAAGCGCCTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGGTAAATACCTTGTGGTTTTaGCCATGCCGGTACACCATC +
Preference number: 5 (lower is better)
Translates to: GHHQSQLPVPHLASLLRVNTLWF*PCRYTI
Trigger: GATGGTGTACCGGCATGGCAAAAACCACAAGGTATT...TACCCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CAA 90 bp AGGAGAAGTAACATAAGAGTTAAAGGGGCCCTCTCTGAACACTCACCCCTCGCCTCAGAACCACCTCAGTaGCATCGTTGTTGGCTTGAA +
Preference number: 5 (lower is better)
Translates to: RRSNIRVKGALSEHSPLASEPPQ*HRCWLE
Trigger: TTCAAGCCAACAACGATGCAACTGAGGTGGTTCTGA...GGCGAGGGGTGAGTGTTCAGAGAGGGCCCCTTTAACTCTTATGTTACTTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp ATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGTCAGAACCACCTCAGTaGCATCGTTGTTGGCTTGAA +
Preference number: 5 (lower is better)
Translates to: MGHHQSQLPVPHLASLLRSEPPQ*HRCWLE
Trigger: TTCAAGCCAACAACGATGCAACTGAGGTGGTTCTGA...CCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CAA 90 bp AAAATGAACCCAAGGAGGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGAAGTGGAGCGTGGAGCTaGTTCAGAACCACCTCAGTT +
Preference number: 5 (lower is better)
Translates to: KMNPRRMVGIDKSAQGWGSGAWS*FRTTSV
Trigger: AACTGAGGTGGTTCTGAACAAGCTCCACGCTCCACT...TCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCCTCCTTGGGTTCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp TGTTTAGATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTAGTGGAGCGTGGAGCTaGTTCAGAACCACCTCAGTT +
Preference number: 5 (lower is better)
Translates to: CLDGTSSVSTPCTTLSLPSGAWS*FRTTSV
Trigger: AACTGAGGTGGTTCTGAACAAGCTCCACGCTCCACT...AGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCATCTAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CAA 90 bp GGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCTCAACTAGCATCCCCAGCATGTaGGAGCAGGGAGCATCTGTG +
Preference number: 5 (lower is better)
Translates to: GFQELDDDCLDGTSSVSTSIPSM*EQGASV
Trigger: CACAGATGCTCCCTGCTCCAACATGCTGGGGATGCT...AGTTGAGACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CAA 90 bp TCAAGTTCCCGTGATCTGGCTCAGCCAGTGAATGGTCGAATACCTCTAACTGCAACACCTTTCACTGTCTaGGGTGTTCCCAGATCTACC +
Preference number: 5 (lower is better)
Translates to: SSSRDLAQPVNGRIPLTATPFTV*GVPRST
Trigger: GGTAGATCTGGGAACACCCAAGACAGTGAAAGGTGT...TGCAGTTAGAGGTATTCGACCATTCACTGGCTGAGCCAGATCACGGGAACTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GTGCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTGGGGTAGGGGGTGGTaGTCTCTTCGCTCTTCACAG +
Preference number: 5 (lower is better)
Translates to: VQNRGNMFAVFLVCFGCCWGRGW*SLRSSQ
Trigger: CTGTGAAGAGCGAAGAGACAACCACCCCCTACCCCA...ACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp AGGAGAAGTAACATAAGAGTTAAAGGGGCCCTCTCTGAACACTCACCCCTCGCCAAATCGAAGTTGCAATaGAATCCCGAAGGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: RRSNIRVKGALSEHSPLAKSKLQ*NPEGSC
Trigger: GCAGCTCCCTTCGGGATTCAATTGCAACTTCGATTT...GGCGAGGGGTGAGTGTTCAGAGAGGGCCCCTTTAACTCTTATGTTACTTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGTGCAGTCTTTCTCGTTaGTTTTGGGTGCTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: EQNQLSLELWSAWGWISSCSLSR*FWVLFL
Trigger: CAAGAACAGCACCCAAAACAAACGAGAAAGACTGCA...CGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp AGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCAAGATGCAGCATTAACCCAAGGAGGATGGTaGGGATTGATAAGAGTGCTC +
Preference number: 5 (lower is better)
Translates to: SCGVLGGGSLRIVQDAALTQGGW*GLIRVL
Trigger: GAGCACTCTTATCAATCCCAACCATCCTCCTTGGGT...TAATGCTGCATCTTGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp AATGTCAATCATTTCGCAGGCATGCCTGGCCCCAAATGCATGACTGGATGTGGATACATCCCGCTCCCCTaGTTGCTTAGAGAAGACACA +
Preference number: 5 (lower is better)
Translates to: NVNHFAGMPGPKCMTGCGYIPLP*LLREDT
Trigger: TGTGTCTTCTCTAAGCAACAAGGGGAGCGGGATGTA...TCCACATCCAGTCATGCATTTGGGGCCAGGCATGCCTGCGAAATGATTGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CAA 90 bp AGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGAGTTCACACAGAACGTCCACAAGTTATTTaGACACACAGGCAACTGAGC +
Preference number: 5 (lower is better)
Translates to: RVLRVGDPGKRCLRVHTERPQVI*THRQLS
Trigger: GCTCAGTTGCCTGTGTGTCAAAATAACTTGTGGACG...TTCTGTGTGAACTCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CAA 90 bp AGGACTTACCAGCTTTCTGAACACTGCGCATCATGGGAGGGTGAAGAGGAAAAGCTCGGAGCAGCACTTTaGGTGGTTCATCTTGACCTT +
Preference number: 5 (lower is better)
Translates to: RTYQLSEHCASWEGEEEKLGAAL*VVHLDL
Trigger: AAGGTCAAGATGAACCACCAAAAGTGCTGCTCCGAG...CTTTTCCTCTTCACCCTCCCATGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGCACTTTAGTGAGTTGGGGTACTaGGGAATGGAGCCATCGGGG +
Preference number: 5 (lower is better)
Translates to: DTVGLELANGSYSLTKHFSELGY*GMEPSG
Trigger: CCCCGATGGCTCCATTCCCAAGTACCCCAACTCACT...AAAGTGCTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAGAACTGTAAAATGGCTCACTAGGATCAGCAGTGAGTaGGGGTACTTGGGAATGGAG +
Preference number: 5 (lower is better)
Translates to: EVQVRNRARLWRTVKWLTRISSE*GYLGME
Trigger: CTCCATTCCCAAGTACCCCAACTCACTGCTGATCCT...AGTGAGCCATTTTACAGTTCTCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp AGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTCTGAACACTGCGCATCAGACCAGCCTCCAGCCTaGGTGTGGTATCTACATGTA +
Preference number: 5 (lower is better)
Translates to: RLLLEIPRTYQLSEHCASDQPPA*VWYLHV
Trigger: TACATGTAGATACCACACCAAGGCTGGAGGCTGGTC...TGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS TCA 90 bp CATACATCCAACCACAGGGCTCCTCGAGGAAATCGAAGTTGCAATTaGATCCCGAAGGGAGCTGCAAATCTTTGTCATCCTCAAAGCTGC +
Preference number: 5 (lower is better)
Translates to: HTSNHRAPRGNRSCN*IPKGAANLCHPQSC
Trigger: GCAGCTTTGAGGATGACAAAGATTTGCAGCTCCCTTCGGGATTCAATTGCAACTTCGATTTCCTCGAGGAGCCCTGTGGTTGGATGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000460987.1
CDS TCA 90 bp GGCTCTAATCAGCCTCTTCTGTCCACCTCGGAGAGCAGACAAATGTaGAAATTGCTGTTCCCTAAATGCCAGAGAAGAATGTCTCCCCAG +
Preference number: 5 (lower is better)
Translates to: GSNQPLLSTSESRQM*KLLFPKCQRRMSPQ
Trigger: CTGGGGAGACATTCTTCTCTGGCATTTAGGGAACAGCAATTTTCACATTTGTCTGCTCTCCGAGGTGGACAGAAGAGGCTGATTAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468256.1
CDS TCA 90 bp TTGTTCCTCACTGGCTGTCTTAGAGCTGATGAGTGGCAAATTGGGTaGGATGATTTGGAGTCAGGGAGCATATCTAGGTGGCAAACCAGG +
Preference number: 5 (lower is better)
Translates to: LFLTGCLRADEWQIG*DDLESGSISRWQTR
Trigger: CCTGGTTTGCCACCTAGATATGCTCCCTGACTCCAAATCATCTCACCCAATTTGCCACTCATCAGCTCTAAGACAGCCAGTGAGGAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485684.5
CDS GCA 90 bp CTTGCTGGAATGAAACGTCAGATAGGATTCAGGTGCAATCCGTCATaGCTCGGAGCAGCACTTTTGGTGGTTCATCTTGACCTTGTGCTT +
Preference number: 5 (lower is better)
Translates to: LAGMKRQIGFRCNPS*LGAALLVVHLDLVL
Trigger: AAGCACAAGGTCAAGATGAACCACCAAAAGTGCTGCTCCGAGGCATGACGGATTGCACCTGAATCCTATCTGACGTTTCATTCCAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357785.10
ENST00000360409.7
ENST00000467850.1
CDS CCA 90 bp GCAGAGAAAGAAGTGGCTTCCTTTGCTTATTCATTTAACTCATCTTaGCGATCGCTGGCTTTCGGGTCAGGCTTTGGTCTCATCCTTCCC +
Preference number: 5 (lower is better)
Translates to: AEKEVASFAYSFNSS*RSLAFGSGFGLILP
Trigger: GGGAAGGATGAGACCAAAGCCTGACCCGAAAGCCAGCGATCGCCAAGATGAGTTAAATGAATAAGCAAAGGAAGCCACTTCTTTCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468256.1
CDS-3UTR CAA 90 bp ATGGGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGCTCTCACTTGGTGTCTaGAAAAGTAGAGGGCTAAGA +
Preference number: 5 (lower is better)
Translates to: MGHHQSQLPVPHLASLLRLSLGV*KSRGLR
Trigger: TCTTAGCCCTCTACTTTTCAAGACACCAAGTGAGAG...CCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CAA 90 bp CTCTGTTCTCCTTCCCGTCCAGTGGTGACCAGTTACAATAACTCGCTGATGGGGTCGATAAAGTCATACTaGCAGTCGTGCTTCTCGATT +
Preference number: 5 (lower is better)
Translates to: LCSPSRPVVTSYNNSLMGSIKSY*QSCFSI
Trigger: AATCGAGAAGCACGACTGCAAGTATGACTTTATCGA...CCCCATCAGCGAGTTATTGTAACTGGTCACCACTGGACGGGAAGGAGAACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGCACTTTATGTTCCCACAGTGTTaGCCCAGGAGGTCTGCGGAT +
Preference number: 5 (lower is better)
Translates to: DTVGLELANGSYSLTKHFMFPQC*PRRSAD
Trigger: ATCCGCAGACCTCCTGGGCAAACACTGTGGGAACAT...AAAGTGCTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp CCACCAGACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGAGGATGATCTCCATCTaGGGTTTGGCCAGGATGGTA +
Preference number: 5 (lower is better)
Translates to: PPDTVGLELANGSYSLTKRMISI*GLARMV
Trigger: TACCATCCTGGCCAAACCCAAGATGGAGATCATCCT...CTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTCTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GAATCATCAGGGTATATGGTAACTCAGCTGGTCACTACACTGGCTGTATTTTCCTTGGTCCCACAGTACTaGCCAATCAGGGGGCCAACA +
Preference number: 5 (lower is better)
Translates to: ESSGYMVTQLVTTLAVFSLVPQY*PIRGPT
Trigger: TGTTGGCCCCCTGATTGGCAAGTACTGTGGGACCAA...GGAAAATACAGCCAGTGTAGTGACCAGCTGAGTTACCATATACCCTGATGATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CAA 90 bp TTTCCAGCACACAGGCAATCCTTAGGCGTTAATATGAAATCAAGATTTGGATCTACCATGGAGCCGGCTTaGTTGAGGGGTCCACCTCCC +
Preference number: 5 (lower is better)
Translates to: FPAHRQSLGVNMKSRFGSTMEPA*LRGPPP
Trigger: GGGAGGTGGACCCCTCAACAAAGCCGGCTCCATGGT...AGATCCAAATCTTGATTTCATATTAACGCCTAAGGATTGCCTGTGTGCTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp CAAAGACACCAGAAGACAAGGGGGTCTTGTTTGAGTGTGCTAGGGGAACCTTCTAATACCTTGTGGTTTTaGCCATGCCGGTACACCATC +
Preference number: 5 (lower is better)
Translates to: QRHQKTRGSCLSVLGEPSNTLWF*PCRYTI
Trigger: GATGGTGTACCGGCATGGCAAAAACCACAAGGTATT...AGAAGGTTCCCCTAGCACACTCAAACAAGACCCCCTTGTCTTCTGGTGTCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CAA 90 bp TTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGAAATACCTTGTGGTTTTaGCCATGCCGGTACACCATC +
Preference number: 5 (lower is better)
Translates to: LGLIRVLRVGDPGKRCLRNTLWF*PCRYTI
Trigger: GATGGTGTACCGGCATGGCAAAAACCACAAGGTATT...TCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTCTTGCTTCGGCCACACCTTTCACTGTCTaGGGTGTTCCCAGATCTACC +
Preference number: 5 (lower is better)
Translates to: ATCLQSFSFVLGAVLASATPFTV*GVPRST
Trigger: GGTAGATCTGGGAACACCCAAGACAGTGAAAGGTGT...GGCCGAAGCAAGAACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp TGCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTTGGGGTAGGGGGTGGTaGTCTCTTCGCTCTTCACAG +
Preference number: 5 (lower is better)
Translates to: CKIEATCLQSFSFVLGAVWGRGW*SLRSSQ
Trigger: CTGTGAAGAGCGAAGAGACAACCACCCCCTACCCCA...AACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp TTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGATCGAGGAAATCGAAGTaGCAATTGAATCCCGAAGGG +
Preference number: 5 (lower is better)
Translates to: LGLIRVLRVGDPGKRCLRSRKSK*QLNPEG
Trigger: CCCTTCGGGATTCAATTGCAACTTCGATTTCCTCGA...TCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GAATCATCAGGGTATATGGTAACTCAGCTGGTCACTACACTGGCTGTATTTTCCTTTTGGGTGCTGTTCTaGCTTCGGCCCTCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: ESSGYMVTQLVTTLAVFSFWVLF*LRPSAV
Trigger: CACTGCTGAGGGCCGAAGCAAGAACAGCACCCAAAA...GGAAAATACAGCCAGTGTAGTGACCAGCTGAGTTACCATATACCCTGATGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CAA 90 bp GTGCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTTTTGGGTGCTGTTCTaGCTTCGGCCCTCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: VQNRGNMFAVFLVCFGCCFWVLF*LRPSAV
Trigger: CACTGCTGAGGGCCGAAGCAAGAACAGCACCCAAAA...ACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp TGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGTCTTTCTCGTTTGTTTaGGGTGCTGTTCTTGCTTCG +
Preference number: 5 (lower is better)
Translates to: WLGLIRVLRVGDPGKRCLSFSFV*GAVLAS
Trigger: CGAAGCAAGAACAGCACCCAAAACAAACGAGAAAGA...CAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTCTTGCTTCGGCCGGAGGATGGTTGGGATaGATAAGAGTGCTCAGGGTT +
Preference number: 5 (lower is better)
Translates to: ATCLQSFSFVLGAVLASAGGWLG*IRVLRV
Trigger: AACCCTGAGCACTCTTATCAATCCCAACCATCCTCC...GGCCGAAGCAAGAACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp TGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGCCAGTGGCTGTTATCTaGACATTTCAAAGACACCAG +
Preference number: 5 (lower is better)
Translates to: WLGLIRVLRVGDPGKRCLPVAVI*TFQRHQ
Trigger: CTGGTGTCTTTGAAATGTCAAGATAACAGCCACTGG...CAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CAA 90 bp TGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGCCTACAAGGGTCTATTaGCCAGATGCCATGAATGTT +
Preference number: 5 (lower is better)
Translates to: WLGLIRVLRVGDPGKRCLPTRVY*PDAMNV
Trigger: AACATTCATGGCATCTGGCAAATAGACCCTTGTAGG...CAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CAA 90 bp CTCTATGGGGCACCTACAGGAATGTCAATCATTTCGCAGGCATGCCTGGCCCCATGGTTACATCTTCATTaGACCTTCTCTGTGATGATG +
Preference number: 5 (lower is better)
Translates to: LYGAPTGMSIISQACLAPWLHLH*TFSVMM
Trigger: CATCATCACAGAGAAGGTCAAATGAAGATGTAACCA...TGGGGCCAGGCATGCCTGCGAAATGATTGACATTCCTGTAGGTGCCCCATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CAA 90 bp AGGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGGAGGTAGGACACTTCTaGAAATCTCAAGGTAGCACA +
Preference number: 5 (lower is better)
Translates to: RMVGIDKSAQGWGSGKEMEVGHF*KSQGST
Trigger: TGTGCTACCTTGAGATTTCAAGAAGTGTCCTACCTC...CATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CAA 90 bp GAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGTTGCTATCATCTCTTaGTCTTCTGAGAAGCAACTC +
Preference number: 5 (lower is better)
Translates to: EQNQLSLELWSAWGWISSVAIIS*SSEKQL
Trigger: GAGTTGCTTCTCAGAAGACAAAGAGATGATAGCAAC...CGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CAA 90 bp AGGAGAAGTAACATAAGAGTTAAAGGGGCCCTCTCTGAACACTCACCCCTCGCCGGAAACATATCCATTTaGGAGAAGGTGGCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: RRSNIRVKGALSEHSPLAGNISI*EKVALS
Trigger: GGAAAGAGCCACCTTCTCCAAAATGGATATGTTTCC...GGCGAGGGGTGAGTGTTCAGAGAGGGCCCCTTTAACTCTTATGTTACTTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357118.8
CDS-3UTR CAA 90 bp GGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGGTAGGAAACATATCCATTTaGGAGAAGGTGGCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: GHHQSQLPVPHLASLLRVGNISI*EKVALS
Trigger: GGAAAGAGCCACCTTCTCCAAAATGGATATGTTTCC...TACCCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CAA 90 bp GAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAGAACTGTAAAATGGCTCACTCTGAGTCCTGGTGGCTaGTCTTCACCTCTATTCTTG +
Preference number: 5 (lower is better)
Translates to: EVQVRNRARLWRTVKWLTLSPGG*SSPLFL
Trigger: CAAGAATAGAGGTGAAGACAAGCCACCAGGACTCAG...AGTGAGCCATTTTACAGTTCTCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAGAACTGTAAAATGGCTCACTCCTAAAGCTAAGCCCTaGGGCTTGACAGCTCTACTT +
Preference number: 5 (lower is better)
Translates to: EVQVRNRARLWRTVKWLTPKAKP*GLTALL
Trigger: AAGTAGAGCTGTCAAGCCCAAGGGCTTAGCTTTAGG...AGTGAGCCATTTTACAGTTCTCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS GCA 90 bp CATGTATTTCTGGGATGTCCACTGCAAAAGCCGAGATGGGTTCCATaGAGTTCTCCAGTGGGACATCAGTGCTTATCCGAATGTCATCAA +
Preference number: 5 (lower is better)
Translates to: HVFLGCPLQKPRWVP*SSPVGHQCLSECHQ
Trigger: TTGATGACATTCGGATAAGCACTGATGTCCCACTGGAGAACTGCATGGAACCCATCTCGGCTTTTGCAGTGGACATCCCAGAAATACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000467850.1
CDS GCA 90 bp ATAACCTGGATGAGGCAAGCATCCCCAATTCTTCTCACTTTGCTCTaGTCTCTCTGCTTTCTCGGGGGAGAACACGTCCTTTCTGATTTT +
Preference number: 5 (lower is better)
Translates to: ITWMRQASPILLTLL*SLCFLGGEHVLSDF
Trigger: AAAATCAGAAAGGACGTGTTCTCCCCCGAGAAAGCAGAGAGAGCAGAGCAAAGTGAGAAGAATTGGGGATGCTTGCCTCATCCAGGTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485684.5
CDS CCA 90 bp TCTTATGCAGAGGTTTCTAATGGTCAGCGTTTCCCTCCTGAGTCCTaGTGGCTTGTCTTCACCTCTATTCTTGCTGGAATTTCCACCTCA +
Preference number: 5 (lower is better)
Translates to: SYAEVSNGQRFPPES*WLVFTSILAGISTS
Trigger: TGAGGTGGAAATTCCAGCAAGAATAGAGGTGAAGACAAGCCACCAGGACTCAGGAGGGAAACGCTGACCATTAGAAACCTCTGCATAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357785.10
ENST00000360409.7
ENST00000417189.5
ENST00000450507.5
ENST00000464003.1
ENST00000478013.1
CDS CCA 90 bp CTGGCTGTCTTAGAGCTGATGAGTGGCAAATTGGGTGAGATGATTTaGAGTCAGGGAGCATATCTAGGTGGCAAACCAGGAATTCATCTC +
Preference number: 5 (lower is better)
Translates to: LAVLELMSGKLGEMI*SQGAYLGGKPGIHL
Trigger: GAGATGAATTCCTGGTTTGCCACCTAGATATGCTCCCTGACTCCAAATCATCTCACCCAATTTGCCACTCATCAGCTCTAAGACAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485684.5
CDS-3UTR CAA 90 bp TTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGACTCTCACTTGGTGTCTaGAAAAGTAGAGGGCTAAGA +
Preference number: 5 (lower is better)
Translates to: LGLIRVLRVGDPGKRCLRLSLGV*KSRGLR
Trigger: TCTTAGCCCTCTACTTTTCAAGACACCAAGTGAGAG...TCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp AGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGAGTTCACACAGAATCGATAAAGTCATACTaGCAGTCGTGCTTCTCGATT +
Preference number: 5 (lower is better)
Translates to: RVLRVGDPGKRCLRVHTESIKSY*QSCFSI
Trigger: AATCGAGAAGCACGACTGCAAGTATGACTTTATCGA...TTCTGTGTGAACTCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp AGGAGAAGTAACATAAGAGTTAAAGGGGCCCTCTCTGAACACTCACCCCTCGCCTCGATAAAGTCATACTaGCAGTCGTGCTTCTCGATT +
Preference number: 5 (lower is better)
Translates to: RRSNIRVKGALSEHSPLASIKSY*QSCFSI
Trigger: AATCGAGAAGCACGACTGCAAGTATGACTTTATCGA...GGCGAGGGGTGAGTGTTCAGAGAGGGCCCCTTTAACTCTTATGTTACTTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTTGAGGGTATCGATAAAGTCATACTaGCAGTCGTGCTTCTCGATT +
Preference number: 5 (lower is better)
Translates to: GHHQSQLPVPHLASLLRVSIKSY*QSCFSI
Trigger: AATCGAGAAGCACGACTGCAAGTATGACTTTATCGA...TACCCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CAA 90 bp GAGTGGCTTTCAAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGAATCTCCATCTTGGGTTaGGCCAGGATGGTAAAGGTG +
Preference number: 5 (lower is better)
Translates to: EWLSNLPSSAGYFWKSLGISILG*ARMVKV
Trigger: CACCTTTACCATCCTGGCCAAACCCAAGATGGAGAT...TCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp TTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCTCAACTCCCAGTTCAGAGGGTGTTTaGGTCCCACAGTACTTGCCA +
Preference number: 5 (lower is better)
Translates to: FQELDDDCLDGTSSVSTPSSEGV*VPQYLP
Trigger: TGGCAAGTACTGTGGGACCAAAACACCCTCTGAACT...GGGAGTTGAGACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CAA 90 bp TTTCCAGCACACAGGCAATCCTTAGGCGTTAATATGAAATCAAGATTTGGATCTTTGGGGGTCCAGCCATaGTCATCACCATGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: FPAHRQSLGVNMKSRFGSLGVQP*SSPWSR
Trigger: CCGGCTCCATGGTGATGACAATGGCTGGACCCCCAA...AGATCCAAATCTTGATTTCATATTAACGCCTAAGGATTGCCTGTGTGCTGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GTTGTACATAACTTAGAGGTGAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGATGGAGATACTCCTTGTaGGAATCCAAGTTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: VVHNLEVKCRSETGLDFGWRYSL*ESKLGV
Trigger: GACCCCCAACTTGGATTCCAACAAGGAGTATCTCCA...TCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTCACCTCTAAGTTATGTACAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp AGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTCTGAACACTGCGCATCATCAGAACCACCTCAGTaGCATCGTTGTTGGCTTGAA +
Preference number: 5 (lower is better)
Translates to: RLLLEIPRTYQLSEHCASSEPPQ*HRCWLE
Trigger: TTCAAGCCAACAACGATGCAACTGAGGTGGTTCTGA...TGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp AAAATGAACCCAAGGAGGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCGAGGAAATCGAAGTaGCAATTGAATCCCGAAGGG +
Preference number: 5 (lower is better)
Translates to: KMNPRRMVGIDKSAQGWGSRKSK*QLNPEG
Trigger: CCCTTCGGGATTCAATTGCAACTTCGATTTCCTCGA...TCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCCTCCTTGGGTTCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GCAGGACTCATTCCTTTAATAGGATCAGCAGTGAGTTGGGGTACTTGGGAATGGTCGAGGAAATCGAAGTaGCAATTGAATCCCGAAGGG +
Preference number: 5 (lower is better)
Translates to: AGLIPLIGSAVSWGTWEWSRKSK*QLNPEG
Trigger: CCCTTCGGGATTCAATTGCAACTTCGATTTCCTCGA...CCATTCCCAAGTACCCCAACTCACTGCTGATCCTATTAAAGGAATGAGTCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp AGGATGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGATCGAGGCAACATGTTaGCAGTCTTTCTCGTTTGTT +
Preference number: 5 (lower is better)
Translates to: RMVGIDKSAQGWGSGKEMIEATC*QSFSFV
Trigger: AACAAACGAGAAAGACTGCAAACATGTTGCCTCGAT...CATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp CAAGCGAACCAGTCTCTGGAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTGATGCAGCATTAGAGTaGGGTTTGTTGGTTTGGAAT +
Preference number: 5 (lower is better)
Translates to: QANQSLEQNQLSLELWSADAALE*GLLVWN
Trigger: ATTCCAAACCAACAAACCCAACTCTAATGCTGCATC...AGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAGAGACTGGTTCGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGACGTCAGTCCCAGACTaGTTATTCTCTATGACTTAT +
Preference number: 5 (lower is better)
Translates to: EQNQLSLELWSAWGWISSTSVPD*LFSMTY
Trigger: ATAAGTCATAGAGAATAACAAGTCTGGGACTGACGT...CGAAGAGATCCACCCCCAAGCACTCCACAACTCAAGGCTCAGCTGGTTTTGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CAA 90 bp AGAGCAGTCTCATATTCTCAACTAAGGCATGTACATAAAGATGATGCCACTTGGCAACCCCATCCCAAGTaGGGCCCAATAACCACCCTG +
Preference number: 5 (lower is better)
Translates to: RAVSYSQLRHVHKDDATWQPHPK*GPITTL
Trigger: CAGGGTGGTTATTGGGCCCAACTTGGGATGGGGTTG...CCAAGTGGCATCATCTTTATGTACATGCCTTAGTTGAGAATATGAGACTGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CAA 90 bp CCACCAGACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGGTTGCAGAAGAAGAATaGCTCCAGTCCACCTCGTAT +
Preference number: 5 (lower is better)
Translates to: PPDTVGLELANGSYSLTKVAEEE*LQSTSY
Trigger: ATACGAGGTGGACTGGAGCAATTCTTCTTCTGCAAC...CTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTCTGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp CCACCAGACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGTCCTCTTCTGCCTCTTaGAGTTGCTCACAGACCAAA +
Preference number: 5 (lower is better)
Translates to: PPDTVGLELANGSYSLTKSSSAS*SCSQTK
Trigger: TTTGGTCTGTGAGCAACTCAAAGAGGCAGAAGAGGA...CTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTCTGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GCAGGACTCATTCCTTTAATAGGATCAGCAGTGAGTTGGGGTACTTGGGAATGGTCCTCTTCTGCCTCTTaGAGTTGCTCACAGACCAAA +
Preference number: 5 (lower is better)
Translates to: AGLIPLIGSAVSWGTWEWSSSAS*SCSQTK
Trigger: TTTGGTCTGTGAGCAACTCAAAGAGGCAGAAGAGGA...CCATTCCCAAGTACCCCAACTCACTGCTGATCCTATTAAAGGAATGAGTCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGCACTTTGACCAGCCTCCAGCCTaGGTGTGGTATCTACATGTA +
Preference number: 5 (lower is better)
Translates to: DTVGLELANGSYSLTKHFDQPPA*VWYLHV
Trigger: TACATGTAGATACCACACCAAGGCTGGAGGCTGGTC...AAAGTGCTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GTTGTACATAACTTAGAGGTGAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGACTGGCCAAGTCAAAATaGGGCCCAGCGTCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: VVHNLEVKCRSETGLDFGLAKSK*GPASFF
Trigger: AAAGAAAGACGCTGGGCCCAATTTTGACTTGGCCAG...TCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTCACCTCTAAGTTATGTACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGCACTTTAGTTCAGAGGGTGTTTaGGTCCCACAGTACTTGCCA +
Preference number: 5 (lower is better)
Translates to: DTVGLELANGSYSLTKHFSSEGV*VPQYLP
Trigger: TGGCAAGTACTGTGGGACCAAAACACCCTCTGAACT...AAAGTGCTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCTCAACTTGGAGATACTCCTTGTaGGAATCCAAGTTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: GFQELDDDCLDGTSSVSTWRYSL*ESKLGV
Trigger: GACCCCCAACTTGGATTCCAACAAGGAGTATCTCCA...AGTTGAGACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CAA 90 bp GAATCATCAGGGTATATGGTAACTCAGCTGGTCACTACACTGGCTGTATTTTCCACCTGGAGATACTCCTaGTTGGAATCCAAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: ESSGYMVTQLVTTLAVFSTWRYS*LESKLG
Trigger: CCCCAACTTGGATTCCAACAAGGAGTATCTCCAGGT...GGAAAATACAGCCAGTGTAGTGACCAGCTGAGTTACCATATACCCTGATGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CAA 90 bp GGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCTCAACTACCTGGAGATACTCCTaGTTGGAATCCAAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: GFQELDDDCLDGTSSVSTTWRYS*LESKLG
Trigger: CCCCAACTTGGATTCCAACAAGGAGTATCTCCAGGT...AGTTGAGACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CAA 90 bp GAGTGGCTTTCAAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGAAATACCTTGTGGTTTTaGCCATGCCGGTACACCATC +
Preference number: 5 (lower is better)
Translates to: EWLSNLPSSAGYFWKSLGNTLWF*PCRYTI
Trigger: GATGGTGTACCGGCATGGCAAAAACCACAAGGTATT...TCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GTCCAGGCGCTTCTATGGATTTTGACGTGTGAAGTTTCCTTTCCAGTTTGTTTTAGTGGAGCGTGGAGCTaGTTCAGAACCACCTCAGTT +
Preference number: 5 (lower is better)
Translates to: VQALLWILTCEVSFPVCFSGAWS*FRTTSV
Trigger: AACTGAGGTGGTTCTGAACAAGCTCCACGCTCCACT...AAAACAAACTGGAAAGGAAACTTCACACGTCAAAATCCATAGAAGCGCCTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GAATCATCAGGGTATATGGTAACTCAGCTGGTCACTACACTGGCTGTATTTTCCGGAGGATGGTTGGGATaGATAAGAGTGCTCAGGGTT +
Preference number: 5 (lower is better)
Translates to: ESSGYMVTQLVTTLAVFSGGWLG*IRVLRV
Trigger: AACCCTGAGCACTCTTATCAATCCCAACCATCCTCC...GGAAAATACAGCCAGTGTAGTGACCAGCTGAGTTACCATATACCCTGATGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CAA 90 bp AGTTGTGGAGTGCTTGGGGGTGGATCTCTTCGGATAGTCCAAGATGCAGCATTAACAGAATTTTGCTTTTaGAAGCTGCGAAGCATGGCA +
Preference number: 5 (lower is better)
Translates to: SCGVLGGGSLRIVQDAALTEFCF*KLRSMA
Trigger: TGCCATGCTTCGCAGCTTCAAAAAGCAAAATTCTGT...TAATGCTGCATCTTGGACTATCCGAAGAGATCCACCCCCAAGCACTCCACAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CAA 90 bp GATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGAGTTCACACCTTCAGCATCCAGTTTaGTCAATGACAATGCTGATT +
Preference number: 5 (lower is better)
Translates to: DKSAQGWGSGKEMSESSHLQHPV*SMTMLI
Trigger: AATCAGCATTGTCATTGACAAAACTGGATGCTGAAG...GTGTGAACTCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CAA 90 bp CCACCAGACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGGGAAACATATCCATTTaGGAGAAGGTGGCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: PPDTVGLELANGSYSLTKGNISI*EKVALS
Trigger: GGAAAGAGCCACCTTCTCCAAAATGGATATGTTTCC...CTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTCTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp AAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTCTGAGTCCTGGTGGCTaGTCTTCACCTCTATTCTTG +
Preference number: 5 (lower is better)
Translates to: KLTFFCRLLLEIPRTYQLLSPGG*SSPLFL
Trigger: CAAGAATAGAGGTGAAGACAAGCCACCAGGACTCAG...AAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp AGGACTTACCAGCTTTCTGAACACTGCGCATCATGGGAGGGTGAAGAGGAAAAGTTCTGCCTCTTTGAGTaGCTCACAGACCAAAGAAAT +
Preference number: 5 (lower is better)
Translates to: RTYQLSEHCASWEGEEEKFCLFE*LTDQRN
Trigger: ATTTCTTTGGTCTGTGAGCAACTCAAAGAGGCAGAA...CTTTTCCTCTTCACCCTCCCATGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GAGTGGCTTTCAAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGAGGGCTAGTTAAAATCTaGCTTCTACTGTGGGCCGAA +
Preference number: 5 (lower is better)
Translates to: EWLSNLPSSAGYFWKSLGGLVKI*LLLWAE
Trigger: TTCGGCCCACAGTAGAAGCAAGATTTTAACTAGCCC...TCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp CTCAAGGCTGAAGCAGCATGGTTAAGCATTCTTGTCCACAGTACTTGCGGACTTATTCATGCTTATTCCTaGGACCCTCATCCCTGTCAA +
Preference number: 5 (lower is better)
Translates to: LKAEAAWLSILVHSTCGLIHAYS*DPHPCQ
Trigger: TTGACAGGGATGAGGGTCCAAGGAATAAGCATGAAT...AAGTCCGCAAGTACTGTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp TGTTTTATTGGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAAAGAACAGCCTACCTTaGGCTGCTGGGTCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: CFIGFQELDDDCLDGTSSKNSLP*AAGSWG
Trigger: ACCCCAGGACCCAGCAGCCAAAGGTAGGCTGTTCTT...TGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCCAATAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CAA 90 bp GAGTGGCTTTCAAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGACTCTCACTTGGTGTCTaGAAAAGTAGAGGGCTAAGA +
Preference number: 5 (lower is better)
Translates to: EWLSNLPSSAGYFWKSLGLSLGV*KSRGLR
Trigger: TCTTAGCCCTCTACTTTTCAAGACACCAAGTGAGAG...TCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp CCACCAGACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGTCGATAAAGTCATACTaGCAGTCGTGCTTCTCGATT +
Preference number: 5 (lower is better)
Translates to: PPDTVGLELANGSYSLTKSIKSY*QSCFSI
Trigger: AATCGAGAAGCACGACTGCAAGTATGACTTTATCGA...CTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTCTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GTCCAGGCGCTTCTATGGATTTTGACGTGTGAAGTTTCCTTTCCAGTTTGTTTTAGGATGATCTCCATCTaGGGTTTGGCCAGGATGGTA +
Preference number: 5 (lower is better)
Translates to: VQALLWILTCEVSFPVCFRMISI*GLARMV
Trigger: TACCATCCTGGCCAAACCCAAGATGGAGATCATCCT...AAAACAAACTGGAAAGGAAACTTCACACGTCAAAATCCATAGAAGCGCCTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp AAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTCAGAACCACCTCAGTaGCATCGTTGTTGGCTTGAA +
Preference number: 5 (lower is better)
Translates to: KLTFFCRLLLEIPRTYQLSEPPQ*HRCWLE
Trigger: TTCAAGCCAACAACGATGCAACTGAGGTGGTTCTGA...AAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GCAAACCCTGAAAAAGTTAACCTGCTATGTGACAGGTTAACTCTTTCCCTTGTTAGTGGAGCGTGGAGCTaGTTCAGAACCACCTCAGTT +
Preference number: 5 (lower is better)
Translates to: ANPEKVNLLCDRLTLSLVSGAWS*FRTTSV
Trigger: AACTGAGGTGGTTCTGAACAAGCTCCACGCTCCACT...AACAAGGGAAAGAGTTAACCTGTCACATAGCAGGTTAACTTTTTCAGGGTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GTGCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTAAATCGAAGTTGCAATaGAATCCCGAAGGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: VQNRGNMFAVFLVCFGCCKSKLQ*NPEGSC
Trigger: GCAGCTCCCTTCGGGATTCAATTGCAACTTCGATTT...ACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp TTTCCAGCACACAGGCAATCCTTAGGCGTTAATATGAAATCAAGATTTGGATCTGTGGTCCGGAGCCACTaGGCATGGTCATACATCCAA +
Preference number: 5 (lower is better)
Translates to: FPAHRQSLGVNMKSRFGSVVRSH*AWSYIQ
Trigger: TTGGATGTATGACCATGCCAAGTGGCTCCGGACCAC...AGATCCAAATCTTGATTTCATATTAACGCCTAAGGATTGCCTGTGTGCTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp TGGTTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGGTTGGGTTTGTTGGTTaGGAATCAACAAAAAGGAAA +
Preference number: 5 (lower is better)
Translates to: WLGLIRVLRVGDPGKRCLVGFVG*ESTKRK
Trigger: TTTCCTTTTTGTTGATTCCAAACCAACAAACCCAAC...CAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTCTTGCTTCGGCCGATGCAGCATTAGAGTaGGGTTTGTTGGTTTGGAAT +
Preference number: 5 (lower is better)
Translates to: ATCLQSFSFVLGAVLASADAALE*GLLVWN
Trigger: ATTCCAAACCAACAAACCCAACTCTAATGCTGCATC...GGCCGAAGCAAGAACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp CAAGGAGATGGGTCAGCTAGCCTACCCACAGATAAAGATAACAAACACACCAAGGGAAACATATCCATTTaGGAGAAGGTGGCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: QGDGSASLPTDKDNKHTKGNISI*EKVALS
Trigger: GGAAAGAGCCACCTTCTCCAAAATGGATATGTTTCC...CTTGGTGTGTTTGTTATCTTTATCTGTGGGTAGGCTAGCTGACCCATCTCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp TGGATCTTGATGCGAACAATCTTATCCTTCACACAGTTTCATTCTATTCCTGATAAACCAAGACTTGCCTaGGGCATCACACGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: WILMRTILSFTQFHSIPDKPRLA*GITRPP
Trigger: TGGGGGCCGTGTGATGCCCAAGGCAAGTCTTGGTTT...ATCAGGAATAGAATGAAACTGTGTGAAGGATAAGATTGTTCGCATCAAGATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGCACTTTGTTGCAGAAGAAGAATaGCTCCAGTCCACCTCGTAT +
Preference number: 5 (lower is better)
Translates to: DTVGLELANGSYSLTKHFVAEEE*LQSTSY
Trigger: ATACGAGGTGGACTGGAGCAATTCTTCTTCTGCAAC...AAAGTGCTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp CTCAAGGCTGAAGCAGCATGGTTAAGCATTCTTGTCCACAGTACTTGCGGACTTATAAACAGCTGTTGGTaGAACTCTTGCTCTCTGCAT +
Preference number: 5 (lower is better)
Translates to: LKAEAAWLSILVHSTCGLINSCW*NSCSLH
Trigger: ATGCAGAGAGCAAGAGTTCAACCAACAGCTGTTTAT...AAGTCCGCAAGTACTGTGGACAAGAATGCTTAACCATGCTGCTTCAGCCTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp AGGACTTACCAGCTTTCTGAACACTGCGCATCATGGGAGGGTGAAGAGGAAAAGATGAATAAACAGCTGTaGGTTGAACTCTTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: RTYQLSEHCASWEGEEEKMNKQL*VELLLS
Trigger: AGAGAGCAAGAGTTCAACCAACAGCTGTTTATTCAT...CTTTTCCTCTTCACCCTCCCATGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GTCCAGGCGCTTCTATGGATTTTGACGTGTGAAGTTTCCTTTCCAGTTTGTTTTCTGGCCAAGTCAAAATaGGGCCCAGCGTCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: VQALLWILTCEVSFPVCFLAKSK*GPASFF
Trigger: AAAGAAAGACGCTGGGCCCAATTTTGACTTGGCCAG...AAAACAAACTGGAAAGGAAACTTCACACGTCAAAATCCATAGAAGCGCCTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS GCA 90 bp GCAGTGTCCGCTAATAGGTTTGCAAAGAGGGCAAAATGTAAAATCTaGTGCATTGTAACAGCACAAACAACATTGCCATCACCCAAGGCT +
Preference number: 5 (lower is better)
Translates to: AVSANRFAKRAKCKI*CIVTAQTTLPSPKA
Trigger: AGCCTTGGGTGATGGCAATGTTGTTTGTGCTGTTACAATGCAGCAGATTTTACATTTTGCCCTCTTTGCAAACCTATTAGCGGACACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485684.5
CDS-3UTR CAA 90 bp TTTATTGGATTTCAGGAGTTGGATGACGACTGTTTAGATGGGACATCATCAGTCAGGATGATCTCCATCTaGGGTTTGGCCAGGATGGTA +
Preference number: 5 (lower is better)
Translates to: FIGFQELDDDCLDGTSSVRMISI*GLARMV
Trigger: TACCATCCTGGCCAAACCCAAGATGGAGATCATCCT...GACTGATGATGTCCCATCTAAACAGTCGTCATCCAACTCCTGAAATCCAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS-3UTR CAA 90 bp GAGAAAGCGGAGAATAATGATCACTGCTCCACTTCTATTCTGGAAAAGTCATTCGGGAGCTGCAAATCTTaGTCATCCTCAAAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: EKAENNDHCSTSILEKSFGSCKS*SSSKLQ
Trigger: CTGCAGCTTTGAGGATGACAAAGATTTGCAGCTCCC...GAATGACTTTTCCAGAATAGAAGTGGAGCAGTGATCATTATTCTCCGCTTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GTGCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTCTTTCTCGTTTGTTTaGGGTGCTGTTCTTGCTTCG +
Preference number: 5 (lower is better)
Translates to: VQNRGNMFAVFLVCFGCCSFSFV*GAVLAS
Trigger: CGAAGCAAGAACAGCACCCAAAACAAACGAGAAAGA...ACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp CCAGAAACCAAAATGAACCCAAGGAGGATGGTTGGGATTGATAAGAGTGCTCAGATCGAGGCAACATGTTaGCAGTCTTTCTCGTTTGTT +
Preference number: 5 (lower is better)
Translates to: PETKMNPRRMVGIDKSAQIEATC*QSFSFV
Trigger: AACAAACGAGAAAGACTGCAAACATGTTGCCTCGAT...CTGAGCACTCTTATCAATCCCAACCATCCTCCTTGGGTTCATTTTGGTTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp TTGGGATTGATAAGAGTGCTCAGGGTTGGGGATCCGGGAAAGAGATGTCTGAGAAGAAAGTTCACAAAGTaGTTGTCACCTTCTGTTACA +
Preference number: 5 (lower is better)
Translates to: LGLIRVLRVGDPGKRCLRRKFTK*LSPSVT
Trigger: TGTAACAGAAGGTGACAACAACTTTGTGAACTTTCT...TCTCAGACATCTCTTTCCCGGATCCCCAACCCTGAGCACTCTTATCAATCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CAA 90 bp GAGTGGCTTTCAAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGAGTATTCTGGATCGGTTaGATCGAGATTATGGCATTC +
Preference number: 5 (lower is better)
Translates to: EWLSNLPSSAGYFWKSLGVFWIG*IEIMAF
Trigger: GAATGCCATAATCTCGATCAAACCGATCCAGAATAC...TCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTTGAAAGCCACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp TCAAGTTCCCGTGATCTGGCTCAGCCAGTGAATGGTCGAATACCTCTAACTGCATTTGCTTTTCAAGTGTaGATTAGAAAGAGAAAGCGG +
Preference number: 5 (lower is better)
Translates to: SSSRDLAQPVNGRIPLTAFAFQV*IRKRKR
Trigger: CCGCTTTCTCTTTCTAATCAACACTTGAAAAGCAAA...TGCAGTTAGAGGTATTCGACCATTCACTGGCTGAGCCAGATCACGGGAACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GTTGTACATAACTTAGAGGTGAAGTGCAGGTCCGAAACAGGGCTAGACTTTGGAGGCTGGGCATACTGGTaGAGTTTCAAATATATTTCC +
Preference number: 5 (lower is better)
Translates to: VVHNLEVKCRSETGLDFGGWAYW*SFKYIS
Trigger: GGAAATATATTTGAAACTCAACCAGTATGCCCAGCC...TCCAAAGTCTAGCCCTGTTTCGGACCTGCACTTCACCTCTAAGTTATGTACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GCAGGACTCATTCCTTTAATAGGATCAGCAGTGAGTTGGGGTACTTGGGAATGGATGAATAAACAGCTGTaGGTTGAACTCTTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: AGLIPLIGSAVSWGTWEWMNKQL*VELLLS
Trigger: AGAGAGCAAGAGTTCAACCAACAGCTGTTTATTCAT...CCATTCCCAAGTACCCCAACTCACTGCTGATCCTATTAAAGGAATGAGTCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS TCA 90 bp CATCCACAGCTTTCACTTCACCAACATAAGCATTACCTTGGGTCCTaGAGGTTAGAACTCGAATTCGACTGTAATCCAAAGTCGTTCAGT +
Preference number: 5 (lower is better)
Translates to: HPQLSLHQHKHYLGS*RLELEFDCNPKSFS
Trigger: ACTGAACGACTTTGGATTACAGTCGAATTCGAGTTCTAACCTTCAGGACCCAAGGTAATGCTTATGTTGGTGAAGTGAAAGCTGTGGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485684.5
CDS CCA 90 bp AATCCAAAGTCGTTCAGTTTGGCTCTCAGCTTTCCTCCAATACTTTaGATTTACATTAACATAAACCTCACCCCCAGAGAGCACCAGTGT +
Preference number: 5 (lower is better)
Translates to: NPKSFSLALSFPPIL*IYININLTPREHQC
Trigger: ACACTGGTGCTCTCTGGGGGTGAGGTTTATGTTAATGTAAATCCAAAGTATTGGAGGAAAGCTGAGAGCCAAACTGAACGACTTTGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485684.5
CDS-3UTR CAA 90 bp AAACAAGCGAACCAGTCTCTGGAACAAAACCAGCTGAGCCTTGAGTTGTGGAGTGTTGGGTTTGTTGGTTaGGAATCAACAAAAAGGAAA +
Preference number: 5 (lower is better)
Translates to: KQANQSLEQNQLSLELWSVGFVG*ESTKRK
Trigger: TTTCCTTTTTGTTGATTCCAAACCAACAAACCCAAC...ACTCCACAACTCAAGGCTCAGCTGGTTTTGTTCCAGAGACTGGTTCGCTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp TTTCCAGCACACAGGCAATCCTTAGGCGTTAATATGAAATCAAGATTTGGATCTCTCGGAGCAGCACTTTaGGTGGTTCATCTTGACCTT +
Preference number: 5 (lower is better)
Translates to: FPAHRQSLGVNMKSRFGSLGAAL*VVHLDL
Trigger: AAGGTCAAGATGAACCACCAAAAGTGCTGCTCCGAG...AGATCCAAATCTTGATTTCATATTAACGCCTAAGGATTGCCTGTGTGCTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp AAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTGTATTCTGGATCGGTTaGATCGAGATTATGGCATTC +
Preference number: 5 (lower is better)
Translates to: KLTFFCRLLLEIPRTYQLVFWIG*IEIMAF
Trigger: GAATGCCATAATCTCGATCAAACCGATCCAGAATAC...AAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp AAACTTACCTTCTTCTGCAGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTGCGCTTCTATGGATTTaGACGTGTGAAGTTTCCTTT +
Preference number: 5 (lower is better)
Translates to: KLTFFCRLLLEIPRTYQLALLWI*TCEVSF
Trigger: AAAGGAAACTTCACACGTCAAAATCCATAGAAGCGC...AAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCTGCAGAAGAAGGTAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp AGGCTACTTCTGGAAATCCCTAGGACTTACCAGCTTTCTGAACACTGCGCATCAATCAAGATTTGGATCTaGATGCGAACAATCTTATCC +
Preference number: 5 (lower is better)
Translates to: RLLLEIPRTYQLSEHCASIKIWI*MRTILS
Trigger: GGATAAGATTGTTCGCATCAAGATCCAAATCTTGAT...TGATGCGCAGTGTTCAGAAAGCTGGTAAGTCCTAGGGATTTCCAGAAGTAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GCAGGACTCATTCCTTTAATAGGATCAGCAGTGAGTTGGGGTACTTGGGAATGGATCAAGATTTGGATCTaGATGCGAACAATCTTATCC +
Preference number: 5 (lower is better)
Translates to: AGLIPLIGSAVSWGTWEWIKIWI*MRTILS
Trigger: GGATAAGATTGTTCGCATCAAGATCCAAATCTTGAT...CCATTCCCAAGTACCCCAACTCACTGCTGATCCTATTAAAGGAATGAGTCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GACACTGTGGGTCTAGAATTAGCGAATGGCTCCTATTCACTCACAAAGCACTTTGGCTGGGCATACTGGTaGAGTTTCAAATATATTTCC +
Preference number: 5 (lower is better)
Translates to: DTVGLELANGSYSLTKHFGWAYW*SFKYIS
Trigger: GGAAATATATTTGAAACTCAACCAGTATGCCCAGCC...AAAGTGCTTTGTGAGTGAATAGGAGCCATTCGCTAATTCTAGACCCACAGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GAGAAAGCGGAGAATAATGATCACTGCTCCACTTCTATTCTGGAAAAGTCATTCGGGCTAGTTAAAATCTaGCTTCTACTGTGGGCCGAA +
Preference number: 5 (lower is better)
Translates to: EKAENNDHCSTSILEKSFGLVKI*LLLWAE
Trigger: TTCGGCCCACAGTAGAAGCAAGATTTTAACTAGCCC...GAATGACTTTTCCAGAATAGAAGTGGAGCAGTGATCATTATTCTCCGCTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp TTCCTATTCAATTCTGGCTTTAATCCCAAAAATGTGGGACAAGGGAAAAGACAAATCTCCATCTTGGGTTaGGCCAGGATGGTAAAGGTG +
Preference number: 5 (lower is better)
Translates to: FLFNSGFNPKNVGQGKRQISILG*ARMVKV
Trigger: CACCTTTACCATCCTGGCCAAACCCAAGATGGAGAT...TTGTCTTTTCCCTTGTCCCACATTTTTGGGATTAAAGCCAGAATTGAATAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CAA 90 bp TGGATCTTGATGCGAACAATCTTATCCTTCACACAGTTTCATTCTATTCCTGATATCTCCATCTTGGGTTaGGCCAGGATGGTAAAGGTG +
Preference number: 5 (lower is better)
Translates to: WILMRTILSFTQFHSIPDISILG*ARMVKV
Trigger: CACCTTTACCATCCTGGCCAAACCCAAGATGGAGAT...ATCAGGAATAGAATGAAACTGTGTGAAGGATAAGATTGTTCGCATCAAGATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp TGGATCTTGATGCGAACAATCTTATCCTTCACACAGTTTCATTCTATTCCTGATACCTGGAGATACTCCTaGTTGGAATCCAAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: WILMRTILSFTQFHSIPDTWRYS*LESKLG
Trigger: CCCCAACTTGGATTCCAACAAGGAGTATCTCCAGGT...ATCAGGAATAGAATGAAACTGTGTGAAGGATAAGATTGTTCGCATCAAGATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp TGGATCTTGATGCGAACAATCTTATCCTTCACACAGTTTCATTCTATTCCTGATACACCTTTCACTGTCTaGGGTGTTCCCAGATCTACC +
Preference number: 5 (lower is better)
Translates to: WILMRTILSFTQFHSIPDTPFTV*GVPRST
Trigger: GGTAGATCTGGGAACACCCAAGACAGTGAAAGGTGT...ATCAGGAATAGAATGAAACTGTGTGAAGGATAAGATTGTTCGCATCAAGATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp TGGATCTTGATGCGAACAATCTTATCCTTCACACAGTTTCATTCTATTCCTGATAAATCGAAGTTGCAATaGAATCCCGAAGGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: WILMRTILSFTQFHSIPDKSKLQ*NPEGSC
Trigger: GCAGCTCCCTTCGGGATTCAATTGCAACTTCGATTT...ATCAGGAATAGAATGAAACTGTGTGAAGGATAAGATTGTTCGCATCAAGATCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp TGCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTGCATTAGAGTTGGGTTaGTTGGTTTGGAATCAACAA +
Preference number: 5 (lower is better)
Translates to: CKIEATCLQSFSFVLGAVALELG*LVWNQQ
Trigger: TTGTTGATTCCAAACCAACAAACCCAACTCTAATGC...AACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS-3UTR CAA 90 bp GAGAAAGCGGAGAATAATGATCACTGCTCCACTTCTATTCTGGAAAAGTCATTCGCGCTTCTATGGATTTaGACGTGTGAAGTTTCCTTT +
Preference number: 5 (lower is better)
Translates to: EKAENNDHCSTSILEKSFALLWI*TCEVSF
Trigger: AAAGGAAACTTCACACGTCAAAATCCATAGAAGCGC...GAATGACTTTTCCAGAATAGAAGTGGAGCAGTGATCATTATTCTCCGCTTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp GAGAAAGCGGAGAATAATGATCACTGCTCCACTTCTATTCTGGAAAAGTCATTCATAAACAGCTGTTGGTaGAACTCTTGCTCTCTGCAT +
Preference number: 5 (lower is better)
Translates to: EKAENNDHCSTSILEKSFINSCW*NSCSLH
Trigger: ATGCAGAGAGCAAGAGTTCAACCAACAGCTGTTTAT...GAATGACTTTTCCAGAATAGAAGTGGAGCAGTGATCATTATTCTCCGCTTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp AGACAGGGTCTTCTTAAAGATCGGCTATCAACTTCAGAAATAGTACTGTATTTCCTCTCACTTGGTGTCTaGAAAAGTAGAGGGCTAAGA +
Preference number: 5 (lower is better)
Translates to: RQGLLKDRLSTSEIVLYFLSLGV*KSRGLR
Trigger: TCTTAGCCCTCTACTTTTCAAGACACCAAGTGAGAG...GAAATACAGTACTATTTCTGAAGTTGATAGCCGATCTTTAAGAAGACCCTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CAA 90 bp TGGATCTTGATGCGAACAATCTTATCCTTCACACAGTTTCATTCTATTCCTGATATTCATGCTTATTCCTaGGACCCTCATCCCTGTCAA +
Preference number: 5 (lower is better)
Translates to: WILMRTILSFTQFHSIPDIHAYS*DPHPCQ
Trigger: TTGACAGGGATGAGGGTCCAAGGAATAAGCATGAAT...ATCAGGAATAGAATGAAACTGTGTGAAGGATAAGATTGTTCGCATCAAGATCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS-3UTR CAA 90 bp TTCCTATTCAATTCTGGCTTTAATCCCAAAAATGTGGGACAAGGGAAAAGACAAGCATTAGAGTTGGGTTaGTTGGTTTGGAATCAACAA +
Preference number: 5 (lower is better)
Translates to: FLFNSGFNPKNVGQGKRQALELG*LVWNQQ
Trigger: TTGTTGATTCCAAACCAACAAACCCAACTCTAATGC...TTGTCTTTTCCCTTGTCCCACATTTTTGGGATTAAAGCCAGAATTGAATAGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272849.7
CDS-3UTR CAA 90 bp TGGATCTTGATGCGAACAATCTTATCCTTCACACAGTTTCATTCTATTCCTGATTTTGCTTTTCAAGTGTaGATTAGAAAGAGAAAGCGG +
Preference number: 5 (lower is better)
Translates to: WILMRTILSFTQFHSIPDFAFQV*IRKRKR
Trigger: CCGCTTTCTCTTTCTAATCAACACTTGAAAAGCAAA...ATCAGGAATAGAATGAAACTGTGTGAAGGATAAGATTGTTCGCATCAAGATCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000360409.7
CDS GCA 72 bp CCGCCGCCGGACAGCCCGAGTGGAAGGCGGCCGCCCTaGTCTTGTCCTCGCCGGGTTCCCCCGGCGGGAGCC +
Preference number: 6 (lower is better)
Translates to: PPPDSPSGRRPP*SCPRRVPPAGA
Trigger: GGCTCCCGCCGGGGGAACCCGGCGAGGACAAGAGCAGGGCGGCCGCCTTCCACTCGGGCTGTCCGGCGGCGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357785.10
ENST00000360409.7
ENST00000417189.5
ENST00000478013.1
CDS GCA 72 bp CAGGAGGAGAGTAGCTCCTCCGCGCCGGGCCGCCGGTaGGTAACGCCCTGGGGAAGAAGCGCCCCCGGGCAC +
Preference number: 6 (lower is better)
Translates to: QEESSSSAPGRR*VTPWGRSAPGH
Trigger: GTGCCCGGGGGCGCTTCTTCCCCAGGGCGTTACGCACCGGCGGCCCGGCGCGGAGGAGCTACTCTCCTCCTG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464003.1
CDS CCA 72 bp ACCACCTGCAGCGCCACCCCGCGGCCGCCCGTGGCCTaGTACTGGAACTCCATGCACACCGGGCTTCGGGGC +
Preference number: 6 (lower is better)
Translates to: TTCSATPRPPVA*YWNSMHTGLRG
Trigger: GCCCCGAAGCCCGGTGTGCATGGAGTTCCAGTACCAGGCCACGGGCGGCCGCGGGGTGGCGCTGCAGGTGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000485684.5
CDS CCA 72 bp CCCGCACCACCTGCAGCGCCACCCCGCGGCCGCCCGTaGCCTGGTACTGGAACTCCATGCACACCGGGCTTC +
Preference number: 6 (lower is better)
Translates to: PAPPAAPPRGRP*PGTGTPCTPGF
Trigger: GAAGCCCGGTGTGCATGGAGTTCCAGTACCAGGCCACGGGCGGCCGCGGGGTGGCGCTGCAGGTGGTGCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000485684.5
CDS GCA 72 bp CCTCCACCTCGCCGAGTGTCTGTGCGGCTGAGGATGTaGTGGGGGCCGGCTGCAGGCTGGTGCCTCGCTCGC +
Preference number: 6 (lower is better)
Translates to: PPPRRVSVRLRM*WGPAAGWCLAR
Trigger: GCGAGCGAGGCACCAGCCTGCAGCCGGCCCCCAGCACATCCTCAGCCGCACAGACACTCGGCGAGGTGGAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357785.10
ENST00000360409.7
ENST00000417189.5
ENST00000450507.5
CDS TCA 72 bp CAGAGGCGTAAACTGACACACATCCCGCGGCACCCTTaGCGGACACACGGGCGGAGGCAGCCGCCGCCGGAC +
Preference number: 6 (lower is better)
Translates to: QRRKLTHIPRHP*RTHGRRQPPPD
Trigger: GTCCGGCGGCGGCTGCCTCCGCCCGTGTGTCCGTCAAGGGTGCCGCGGGATGTGTGTCAGTTTACGCCTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357785.10
ENST00000360409.7
ENST00000417189.5
ENST00000478013.1
CDS GCA 72 bp GAGGAAGGAAGCTGCTGCTGCTGTTGCTGCTGCTGGTaGGGCGGCGGTGGCGGCTGGGATCGCCTGGGAGTG +
Preference number: 6 (lower is better)
Translates to: EEGSCCCCCCCW*GGGGGWDRLGV
Trigger: CACTCCCAGGCGATCCCAGCCGCCACCGCCGCCGCACCAGCAGCAGCAACAGCAGCAGCAGCTTCCTTCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357785.10
ENST00000360409.7
ENST00000417189.5
CDS CAA 90 bp TGCTTCCACTCGCCGCCCTGGTCCTCACGGATGACCCACAGCAACTaGCTCTCCTGGCTGGCTTCCCGCACCACCTGCAGCGCCACCCCG +
Preference number: 6 (lower is better)
Translates to: CFHSPPWSSRMTHSN*LSWLASRTTCSATP
Trigger: CGGGGTGGCGCTGCAGGTGGTGCGGGAAGCCAGCCAGGAGAGCAAGTTGCTGTGGGTCATCCGTGAGGACCAGGGCGGCGAGTGGAAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000472299.5
ENST00000485684.5
CDS CCA 72 bp CTGCATGGGCACCGTGTCCACTGTGGGCTCGGTCCCTaGCAGGAGGGTGCCCCCTGCAAAAGCCGAGATGGG +
Preference number: 6 (lower is better)
Translates to: LHGHRVHCGLGP*QEGAPCKSRDG
Trigger: CCCATCTCGGCTTTTGCAGGGGGCACCCTCCTGCCAGGGACCGAGCCCACAGTGGACACGGTGCCCATGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357118.8
CDS TCA 72 bp GCCCGTGCTTCCACTCGCCGCCCTGGTCCTCACGGATaGCCCACAGCAACTTGCTCTCCTGGCTGGCTTCCC +
Preference number: 6 (lower is better)
Translates to: ARASTRRPGPHG*PTATCSPGWLP
Trigger: GGGAAGCCAGCCAGGAGAGCAAGTTGCTGTGGGTCATCCGTGAGGACCAGGGCGGCGAGTGGAAGCACGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000472299.5
ENST00000485684.5
CDS CCA 72 bp TGGTCCTCACGGATGACCCACAGCAACTTGCTCTCCTaGCTGGCTTCCCGCACCACCTGCAGCGCCACCCCG +
Preference number: 6 (lower is better)
Translates to: WSSRMTHSNLLS*LASRTTCSATP
Trigger: CGGGGTGGCGCTGCAGGTGGTGCGGGAAGCCAGCCAGGAGAGCAAGTTGCTGTGGGTCATCCGTGAGGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000472299.5
ENST00000485684.5
CDS CCA 72 bp GGCGCCCCCGGCGGCCATTACGTAATACCAGTAGGCTaGGATGGGCTGCATGGGCACCGTGTCCACTGTGGG +
Preference number: 6 (lower is better)
Translates to: GAPGGHYVIPVG*DGLHGHRVHCG
Trigger: CCCACAGTGGACACGGTGCCCATGCAGCCCATCCCAGCCTACTGGTATTACGTAATGGCCGCCGGGGGCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS CAA 72 bp TCGCCGCCCTGGTCCTCACGGATGACCCACAGCAACTaGCTCTCCTGGCTGGCTTCCCGCACCACCTGCAGC +
Preference number: 6 (lower is better)
Translates to: SPPWSSRMTHSN*LSWLASRTTCS
Trigger: GCTGCAGGTGGTGCGGGAAGCCAGCCAGGAGAGCAAGTTGCTGTGGGTCATCCGTGAGGACCAGGGCGGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000472299.5
ENST00000485684.5
CDS GCA 72 bp AGGGAACCAGCCCGAGCGGCTGCTAACCAGGCGGGCTaGACTGGGGCTCCAGAGGTATTCCTGGGTGGAAGA +
Preference number: 6 (lower is better)
Translates to: REPARAAANQAG*TGAPEVFLGGR
Trigger: TCTTCCACCCAGGAATACCTCTGGAGCCCCAGTGCAGCCCGCCTGGTTAGCAGCCGCTCGGGCTGGTTCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
ENST00000478054.1
CDS CCA 72 bp GGCAGGATGATCCGCCCGTGCTTCCACTCGCCGCCCTaGTCCTCACGGATGACCCACAGCAACTTGCTCTCC +
Preference number: 6 (lower is better)
Translates to: GRMIRPCFHSPP*SSRMTHSNLLS
Trigger: GGAGAGCAAGTTGCTGTGGGTCATCCGTGAGGACCAGGGCGGCGAGTGGAAGCACGGGCGGATCATCCTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000472299.5
ENST00000485684.5
CDS CCA 72 bp CCCCGGCGGCCATTACGTAATACCAGTAGGCTGGGATaGGCTGCATGGGCACCGTGTCCACTGTGGGCTCGG +
Preference number: 6 (lower is better)
Translates to: PRRPLRNTSRLG*AAWAPCPLWAR
Trigger: CCGAGCCCACAGTGGACACGGTGCCCATGCAGCCCATCCCAGCCTACTGGTATTACGTAATGGCCGCCGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS CAA 72 bp GGGCTGGAGCTGCTGGCCCAGGTGGTCCGGAGCCACTaGGCATGGTCATACATCCAACCACAGGGCTCCTCG +
Preference number: 6 (lower is better)
Translates to: GLELLAQVVRSH*AWSYIQPQGSS
Trigger: CGAGGAGCCCTGTGGTTGGATGTATGACCATGCCAAGTGGCTCCGGACCACCTGGGCCAGCAGCTCCAGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000460987.1
ENST00000468256.1
CDS TCA 72 bp GGCTACACCCGCTTGGCCAGCCTCTCGAGGGGAGTCTaGGGAAGGAAGCTGCTGCTGCTGTTGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: GYTRLASLSRGV*GRKLLLLLLLL
Trigger: CAGCAGCAGCAACAGCAGCAGCAGCTTCCTTCCTCAGACTCCCCTCGAGAGGCTGGCCAAGCGGGTGTAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357785.10
ENST00000360409.7
ENST00000417189.5
CDS GCA 72 bp CACTGTGGGCTCGGTCCCTGGCAGGAGGGTGCCCCCTaGAAAAGCCGAGATGGGTTCCATGCAGTTCTCCAG +
Preference number: 6 (lower is better)
Translates to: HCGLGPWQEGAP*KSRDGFHAVLQ
Trigger: CTGGAGAACTGCATGGAACCCATCTCGGCTTTTGCAGGGGGCACCCTCCTGCCAGGGACCGAGCCCACAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357118.8
CDS CCA 72 bp GGCTGGAGCTGCTGGCCCAGGTGGTCCGGAGCCACTTaGCATGGTCATACATCCAACCACAGGGCTCCTCGA +
Preference number: 6 (lower is better)
Translates to: GWSCWPRWSGAT*HGHTSNHRAPR
Trigger: TCGAGGAGCCCTGTGGTTGGATGTATGACCATGCCAAGTGGCTCCGGACCACCTGGGCCAGCAGCTCCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000460987.1
ENST00000468256.1
CDS CAA 90 bp GAGCCCGAGGAGATGATGGTGGGCGGGGCGATGTTCCCACAGTGTTaGCCCAGGAGGTCTGCGGATTCACTGTCCCCATCCCGAATCTCG +
Preference number: 6 (lower is better)
Translates to: EPEEMMVGGAMFPQC*PRRSADSLSPSRIS
Trigger: CGAGATTCGGGATGGGGACAGTGAATCCGCAGACCTCCTGGGCAAACACTGTGGGAACATCGCCCCGCCCACCATCATCTCCTCGGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
CDS TCA 72 bp CCGGCAGCCGAAGAGCTCCAGCCGGAGGGCGATACCTaGGTGCCAGGTCTGAGGGCGGATTCTAACAAACCT +
Preference number: 6 (lower is better)
Translates to: PAAEELQPEGDT*VPGLRADSNKP
Trigger: AGGTTTGTTAGAATCCGCCCTCAGACCTGGCACTCAGGTATCGCCCTCCGGCTGGAGCTCTTCGGCTGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
ENST00000478054.1
CDS TCA 72 bp GCCCCCAGGCAGCTGTGTGATCTCAGAGGCGTAAACTaGCACACATCCCGCGGCACCCTTGACGGACACACG +
Preference number: 6 (lower is better)
Translates to: APRQLCDLRGVN*HTSRGTLDGHT
Trigger: CGTGTGTCCGTCAAGGGTGCCGCGGGATGTGTGTCAGTTTACGCCTCTGAGATCACACAGCTGCCTGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357785.10
ENST00000360409.7
ENST00000417189.5
ENST00000478013.1
CDS TCA 72 bp GCTCCTTGGGCATCACACGGCCCCCAGGCAGCTGTGTaGTCTCAGAGGCGTAAACTGACACACATCCCGCGG +
Preference number: 6 (lower is better)
Translates to: APWASHGPQAAV*SQRRKLTHIPR
Trigger: CCGCGGGATGTGTGTCAGTTTACGCCTCTGAGATCACACAGCTGCCTGGGGGCCGTGTGATGCCCAAGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS TCA 72 bp ACACAATCTGGTACTCCATGTCGTAGCTGGGCAGGATaGTCCGCCCGTGCTTCCACTCGCCGCCCTGGTCCT +
Preference number: 6 (lower is better)
Translates to: TQSGTPCRSWAG*SARASTRRPGP
Trigger: AGGACCAGGGCGGCGAGTGGAAGCACGGGCGGATCATCCTGCCCAGCTACGACATGGAGTACCAGATTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000472299.5
ENST00000485684.5
CDS GCA 72 bp CGGCGACCACCTCTCCGGGTATACCCGCACATACTGTaGCGGAATGGGGTCAAACCTTCGGATGTCAGGGGT +
Preference number: 6 (lower is better)
Translates to: RRPPLRVYPHIL*RNGVKPSDVRG
Trigger: ACCCCTGACATCCGAAGGTTTGACCCCATTCCGGCACAGTATGTGCGGGTATACCCGGAGAGGTGGTCGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
CDS GCA 72 bp TCTTGCTTCGGCCCTCAGCAGTGCGAGCCACGGTCTTaGTCTAGCTTAATGGTTAGGGTGGGCTCCACCGCC +
Preference number: 6 (lower is better)
Translates to: SCFGPQQCEPRS*SSLMVRVGSTA
Trigger: GGCGGTGGAGCCCACCCTAACCATTAAGCTAGAGCAAGACCGTGGCTCGCACTGCTGAGGGCCGAAGCAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS CCA 72 bp TGGGGTAGGGGGTGGTTGTCTCTTCGCTCTTCACAGTaGGTCCCAGCGTCTCTACCGTGGGCTTGGAGTCTG +
Preference number: 6 (lower is better)
Translates to: WGRGWLSLRSSQ*VPASLPWAWSL
Trigger: CAGACTCCAAGCCCACGGTAGAGACGCTGGGACCCACTGTGAAGAGCGAAGAGACAACCACCCCCTACCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000460987.1
CDS CCA 72 bp AATTCCTGTCATCTGGAAACGTCCGGTCGTTTGGGCTaGAGCTGCTGGCCCAGGTGGTCCGGAGCCACTTGG +
Preference number: 6 (lower is better)
Translates to: NSCHLETSGRLG*SCWPRWSGATW
Trigger: CCAAGTGGCTCCGGACCACCTGGGCCAGCAGCTCCAGCCCAAACGACCGGACGTTTCCAGATGACAGGAATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000460987.1
ENST00000468256.1
CDS CCA 72 bp CCATTACGTAATACCAGTAGGCTGGGATGGGCTGCATaGGCACCGTGTCCACTGTGGGCTCGGTCCCTGGCA +
Preference number: 6 (lower is better)
Translates to: PLRNTSRLGWAA*APCPLWARSLA
Trigger: TGCCAGGGACCGAGCCCACAGTGGACACGGTGCCCATGCAGCCCATCCCAGCCTACTGGTATTACGTAATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS CCA 72 bp TCCCTGGCAGGAGGGTGCCCCCTGCAAAAGCCGAGATaGGTTCCATGCAGTTCTCCAGTGGGACATCAGTGC +
Preference number: 6 (lower is better)
Translates to: SLAGGCPLQKPR*VPCSSPVGHQC
Trigger: GCACTGATGTCCCACTGGAGAACTGCATGGAACCCATCTCGGCTTTTGCAGGGGGCACCCTCCTGCCAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357118.8
CDS CCA 72 bp TTCCGGGAGCTGGTGAGAGAGAGAGAGCACTCACTCTaGAGCCTCTCATGTCTGCCGGCCACTGAGCGCCAA +
Preference number: 6 (lower is better)
Translates to: FRELVREREHSL*SLSCLPATERQ
Trigger: TTGGCGCTCAGTGGCCGGCAGACATGAGAGGCTCCAGAGTGAGTGCTCTCTCTCTCTCACCAGCTCCCGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467850.1
CDS CAA 72 bp GAGATGATGGTGGGCGGGGCGATGTTCCCACAGTGTTaGCCCAGGAGGTCTGCGGATTCACTGTCCCCATCC +
Preference number: 6 (lower is better)
Translates to: EMMVGGAMFPQC*PRRSADSLSPS
Trigger: GGATGGGGACAGTGAATCCGCAGACCTCCTGGGCAAACACTGTGGGAACATCGCCCCGCCCACCATCATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
CDS CAA 72 bp TTGCCCAGACGGCCCGTAGTCTCGCCCTTTTGTCCTTaGGCTGCAGGAGTCCAGCAGTACCACAGTGGCCTC +
Preference number: 6 (lower is better)
Translates to: LPRRPVVSPFCP*AAGVQQYHSGL
Trigger: GAGGCCACTGTGGTACTGCTGGACTCCTGCAGCCAAAGGACAAAAGGGCGAGACTACGGGCCGTCTGGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464003.1
CDS TCA 72 bp GCAGAGAAGCCATCCTTGGCCACCGCCATGTCCGTGTaGAAGGTCAGGGAGAGGATCCCCGTCGATGAACGA +
Preference number: 6 (lower is better)
Translates to: AEKPSLATAMSV*KVRERIPVDER
Trigger: TCGTTCATCGACGGGGATCCTCTCCCTGACCTTTCACACGGACATGGCGGTGGCCAAGGATGGCTTCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
ENST00000477199.1
CDS TCA 72 bp GGAAGAGGCGGAGATCTGGGAGTCTGCAATGAGGCCTaGGAGCATCCCCAGCATGTTGGAGCAGGGAGCATC +
Preference number: 6 (lower is better)
Translates to: GRGGDLGVCNEA*EHPQHVGAGSI
Trigger: GATGCTCCCTGCTCCAACATGCTGGGGATGCTCTCAGGCCTCATTGCAGACTCCCAGATCTCCGCCTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
ENST00000478054.1
CDS GCA 72 bp GCCTGTCTTGAAGATCTCGTAGCGCAGAGAGAAGCCTaGCCCCTGCCGGGCGTAGTCGGAGGTGAACTTGAT +
Preference number: 6 (lower is better)
Translates to: ACLEDLVAQREA*PLPGVVGGELD
Trigger: ATCAAGTTCACCTCCGACTACGCCCGGCAGGGGGCAGGCTTCTCTCTGCGCTACGAGATCTTCAAGACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
CDS CCA 72 bp GGTGGACCAGGTAGTAACGCGCAGAGAAGCCATCCTTaGCCACCGCCATGTCCGTGTGAAAGGTCAGGGAGA +
Preference number: 6 (lower is better)
Translates to: GGPGSNAQRSHP*PPPCPCERSGR
Trigger: TCTCCCTGACCTTTCACACGGACATGGCGGTGGCCAAGGATGGCTTCTCTGCGCGTTACTACCTGGTCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
CDS CCA 72 bp TGCAGTTCTCCCCACACTCTGTGGCCTCCTCTTCGGTaGGGTAGGGGGTGGTTGTCTCTTCGCTCTTCACAG +
Preference number: 6 (lower is better)
Translates to: CSSPHTLWPPLR*GRGWLSLRSSQ
Trigger: CTGTGAAGAGCGAAGAGACAACCACCCCCTACCCCACCGAAGAGGAGGCCACAGAGTGTGGGGAGAACTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000460987.1
CDS CCA 72 bp CAAGAAATTCCTGTCATCTGGAAACGTCCGGTCGTTTaGGCTGGAGCTGCTGGCCCAGGTGGTCCGGAGCCA +
Preference number: 6 (lower is better)
Translates to: QEIPVIWKRPVV*AGAAGPGGPEP
Trigger: TGGCTCCGGACCACCTGGGCCAGCAGCTCCAGCCCAAACGACCGGACGTTTCCAGATGACAGGAATTTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000460987.1
ENST00000468256.1
CDS CAA 72 bp AGGATGGGATCCAGGGTGTACAGCCAGCTCTTTTCTTaGTCGGTCGAGGGGGCGCCAGACCCTGAGGTTGCA +
Preference number: 6 (lower is better)
Translates to: RMGSRVYSQLFS*SVEGAPDPEVA
Trigger: TGCAACCTCAGGGTCTGGCGCCCCCTCGACCGACAAAGAAAAGAGCTGGCTGTACACCCTGGATCCCATCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000467850.1
CDS CAA 90 bp AGTGGCTTCTCTCTGTTTGCCCAGACGGCCCGTAGTCTCGCCCTTTaGTCCTTTGGCTGCAGGAGTCCAGCAGTACCACAGTGGCCTCTG +
Preference number: 6 (lower is better)
Translates to: SGFSLFAQTARSLAL*SFGCRSPAVPQWPL
Trigger: CAGAGGCCACTGTGGTACTGCTGGACTCCTGCAGCCAAAGGACAAAAGGGCGAGACTACGGGCCGTCTGGGCAAACAGAGAGAAGCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464003.1
CDS CAA 90 bp TCTCTCTGTTTGCCCAGACGGCCCGTAGTCTCGCCCTTTTGTCCTTaGGCTGCAGGAGTCCAGCAGTACCACAGTGGCCTCTGGTTTCTG +
Preference number: 6 (lower is better)
Translates to: SLCLPRRPVVSPFCP*AAGVQQYHSGLWFL
Trigger: CAGAAACCAGAGGCCACTGTGGTACTGCTGGACTCCTGCAGCCAAAGGACAAAAGGGCGAGACTACGGGCCGTCTGGGCAAACAGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464003.1
CDS TCA 72 bp AGCTCCAGCCGGAGGGCGATACCTGAGTGCCAGGTCTaGGGGCGGATTCTAACAAACCTTGTCAGCAGTGGA +
Preference number: 6 (lower is better)
Translates to: SSSRRAIPECQV*GRILTNLVSSG
Trigger: TCCACTGCTGACAAGGTTTGTTAGAATCCGCCCTCAGACCTGGCACTCAGGTATCGCCCTCCGGCTGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
ENST00000478054.1
CDS GCA 72 bp ACGACTCCGATGCCACACACGCAGAACCCAACACAATaGCACGCGCGATGGCGTTACAAGAGGAGTTGGGTG +
Preference number: 6 (lower is better)
Translates to: TTPMPHTQNPTQ*HARWRYKRSWV
Trigger: CACCCAACTCCTCTTGTAACGCCATCGCGCGTGGCATTGTGTTGGGTTCTGCGTGTGTGGCATCGGAGTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464003.1
CDS GCA 72 bp CAGGAGTCCAGCAGTACCACAGTGGCCTCTGGTTTCTaGCCACAGCTTCTATACAGGCCCCCAAACAGCCTG +
Preference number: 6 (lower is better)
Translates to: QESSSTTVASGF*PQLLYRPPNSL
Trigger: CAGGCTGTTTGGGGGCCTGTATAGAAGCTGTGGGCAGAAACCAGAGGCCACTGTGGTACTGCTGGACTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464003.1
CDS GCA 72 bp GACACGGTGTGCACACAGAACAGTGTCTGCAGCAGCTaGTGGCACGTCTTTACCCAGCCTTTCTGGGAGCTG +
Preference number: 6 (lower is better)
Translates to: DTVCTQNSVCSS*WHVFTQPFWEL
Trigger: CAGCTCCCAGAAAGGCTGGGTAAAGACGTGCCAGCAGCTGCTGCAGACACTGTTCTGTGTGCACACCGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485684.5
CDS CCA 72 bp GGCCATCGTAGAGCTCGAAGTTGTAGTTCTCCAGTGTaGTGCAGCTTCGGGAGCTCAGGCCCGAGTAGGAAC +
Preference number: 6 (lower is better)
Translates to: GHRRARSCSSPV*CSFGSSGPSRN
Trigger: GTTCCTACTCGGGCCTGAGCTCCCGAAGCTGCACCACACTGGAGAACTACAACTTCGAGCTCTACGATGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000467850.1
CDS CCA 72 bp CCACACACGCAGAACCCAACACAATGCCACGCGCGATaGCGTTACAAGAGGAGTTGGGTGGCGTACGGTGTT +
Preference number: 6 (lower is better)
Translates to: PHTQNPTQCHAR*RYKRSWVAYGV
Trigger: AACACCGTACGCCACCCAACTCCTCTTGTAACGCCATCGCGCGTGGCATTGTGTTGGGTTCTGCGTGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464003.1
CDS CAA 72 bp GGGGGTCCAGCCATTGTCATCACCATGGAGCCGGCTTaGTTGAGGGGTCCACCTCCCATCAGAGTAGGTAGA +
Preference number: 6 (lower is better)
Translates to: GGPAIVITMEPA*LRGPPPIRVGR
Trigger: TCTACCTACTCTGATGGGAGGTGGACCCCTCAACAAAGCCGGCTCCATGGTGATGACAATGGCTGGACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
CDS CAA 72 bp TCTCTGTTTGCCCAGACGGCCCGTAGTCTCGCCCTTTaGTCCTTTGGCTGCAGGAGTCCAGCAGTACCACAG +
Preference number: 6 (lower is better)
Translates to: SLFAQTARSLAL*SFGCRSPAVPQ
Trigger: CTGTGGTACTGCTGGACTCCTGCAGCCAAAGGACAAAAGGGCGAGACTACGGGCCGTCTGGGCAAACAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464003.1
CDS CAA 72 bp GTGAGGCTCTCAATCCCCTTCCCGCATCTACAGGTGTaGCTAGTGCCATCTAGCGGCAGGAAGGTGTGGCGT +
Preference number: 6 (lower is better)
Translates to: VRLSIPFPHLQV*LVPSSGRKVWR
Trigger: ACGCCACACCTTCCTGCCGCTAGATGGCACTAGCAACACCTGTAGATGCGGGAAGGGGATTGAGAGCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472299.5
CDS TCA 72 bp GCTCTTTTCTTTGTCGGTCGAGGGGGCGCCAGACCCTaGGGTTGCAGAAGAAGAATTGCTCCAGTCCACCTC +
Preference number: 6 (lower is better)
Translates to: ALFFVGRGGARP*GCRRRIAPVHL
Trigger: GAGGTGGACTGGAGCAATTCTTCTTCTGCAACCTCAGGGTCTGGCGCCCCCTCGACCGACAAAGAAAAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000467850.1
CDS GCA 72 bp CGGGGCGATGTTCCCACAGTGTTTGCCCAGGAGGTCTaGGGATTCACTGTCCCCATCCCGAATCTCGATAAA +
Preference number: 6 (lower is better)
Translates to: RGDVPTVFAQEV*GFTVPIPNLDK
Trigger: TTTATCGAGATTCGGGATGGGGACAGTGAATCCGCAGACCTCCTGGGCAAACACTGTGGGAACATCGCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
CDS GCA 72 bp GGAGGGTGCCCCCTGCAAAAGCCGAGATGGGTTCCATaGAGTTCTCCAGTGGGACATCAGTGCTTATCCGAA +
Preference number: 6 (lower is better)
Translates to: GGCPLQKPRWVP*SSPVGHQCLSE
Trigger: TTCGGATAAGCACTGATGTCCCACTGGAGAACTGCATGGAACCCATCTCGGCTTTTGCAGGGGGCACCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357118.8
CDS GCA 72 bp CATCGTAGAGCTCGAAGTTGTAGTTCTCCAGTGTGGTaGAGCTTCGGGAGCTCAGGCCCGAGTAGGAACAGG +
Preference number: 6 (lower is better)
Translates to: HRRARSCSSPVW*SFGSSGPSRNR
Trigger: CCTGTTCCTACTCGGGCCTGAGCTCCCGAAGCTGCACCACACTGGAGAACTACAACTTCGAGCTCTACGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000467850.1
CDS CCA 72 bp GGTCCACCTGGAGATACTCCTTGTTGGAATCCAAGTTaGGGGTCCAGCCATTGTCATCACCATGGAGCCGGC +
Preference number: 6 (lower is better)
Translates to: GPPGDTPCWNPS*GSSHCHHHGAG
Trigger: GCCGGCTCCATGGTGATGACAATGGCTGGACCCCCAACTTGGATTCCAACAAGGAGTATCTCCAGGTGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
CDS CCA 72 bp TTGGCTGCAGGAGTCCAGCAGTACCACAGTGGCCTCTaGTTTCTGCCCACAGCTTCTATACAGGCCCCCAAA +
Preference number: 6 (lower is better)
Translates to: LAAGVQQYHSGL*FLPTASIQAPK
Trigger: TTTGGGGGCCTGTATAGAAGCTGTGGGCAGAAACCAGAGGCCACTGTGGTACTGCTGGACTCCTGCAGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464003.1
CDS CCA 72 bp GGCAGGGCGTGTGCATCTCATGGATGGGATACACAGTaGGACAGGACGGTGCTTACTTGCAGTCGTGCTTCT +
Preference number: 6 (lower is better)
Translates to: GRACASHGWDTQ*DRTVLTCSRAS
Trigger: AGAAGCACGACTGCAAGTAAGCACCGTCCTGTCCCACTGTGTATCCCATCCATGAGATGCACACGCCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478013.1
CDS CCA 72 bp TTCCCTGGAAAGGGAATGCCCCTTGAGGTTTTCCTCTaGGGCCAGGATCCACCACTGGTTAGCAGCAGGTCT +
Preference number: 6 (lower is better)
Translates to: FPGKGMPLEVFL*GQDPPLVSSRS
Trigger: AGACCTGCTGCTAACCAGTGGTGGATCCTGGCCCCAGAGGAAAACCTCAAGGGGCATTCCCTTTCCAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478013.1
CDS CAA 72 bp TGTGGAATGCCATCCCAGATGTCCAGCCAATCGTACTaGCAGTCCCCCTCTCCCACCTGCAAAGGGTCATGC +
Preference number: 6 (lower is better)
Translates to: CGMPSQMSSQSY*QSPSPTCKGSC
Trigger: GCATGACCCTTTGCAGGTGGGAGAGGGGGACTGCAAGTACGATTGGCTGGACATCTGGGATGGCATTCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
ENST00000477199.1
CDS CAA 72 bp AGCCCCTCGGCTCTGTGGTTAACTGAAACCGCTGCCTaGGTACCCTGGAACTGCAAAAGCCGAGATGGGTTC +
Preference number: 6 (lower is better)
Translates to: SPSALWLTETAA*VPWNCKSRDGF
Trigger: GAACCCATCTCGGCTTTTGCAGTTCCAGGGTACCAAGGCAGCGGTTTCAGTTAACCACAGAGCCGAGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485684.5
CDS CAA 90 bp ATGGTGATGAGGATGGGATCCAGGGTGTACAGCCAGCTCTTTTCTTaGTCGGTCGAGGGGGCGCCAGACCCTGAGGTTGCAGAAGAAGAA +
Preference number: 6 (lower is better)
Translates to: MVMRMGSRVYSQLFS*SVEGAPDPEVAEEE
Trigger: TTCTTCTTCTGCAACCTCAGGGTCTGGCGCCCCCTCGACCGACAAAGAAAAGAGCTGGCTGTACACCCTGGATCCCATCCTCATCACCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000467850.1
CDS CAA 90 bp TTGTCGGTCGAGGGGGCGCCAGACCCTGAGGTTGCAGAAGAAGAATaGCTCCAGTCCACCTCGTATTCATCTGCAAAAGCCGAGATGGGT +
Preference number: 6 (lower is better)
Translates to: LSVEGAPDPEVAEEE*LQSTSYSSAKAEMG
Trigger: ACCCATCTCGGCTTTTGCAGATGAATACGAGGTGGACTGGAGCAATTCTTCTTCTGCAACCTCAGGGTCTGGCGCCCCCTCGACCGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412873.2
CDS CAA 90 bp AGCGTTTCCCTCCTGAGTCCTGGTGGCTTGTCTTCACCTCTATTCTaGCTGGAATTTCCACCTCACCAGGAGGAGAGTAGCTCCTCCGCG +
Preference number: 6 (lower is better)
Translates to: SVSLLSPGGLSSPLF*LEFPPHQEESSSSA
Trigger: CGCGGAGGAGCTACTCTCCTCCTGGTGAGGTGGAAATTCCAGCAAGAATAGAGGTGAAGACAAGCCACCAGGACTCAGGAGGGAAACGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464003.1
CDS CAA 90 bp CCTAGCATCCTCCACTCCACAGGGAATAAAGTGGCTTCTCTCTGTTaGCCCAGACGGCCCGTAGTCTCGCCCTTTTGTCCTTTGGCTGCA +
Preference number: 6 (lower is better)
Translates to: PSILHSTGNKVASLC*PRRPVVSPFCPLAA
Trigger: TGCAGCCAAAGGACAAAAGGGCGAGACTACGGGCCGTCTGGGCAAACAGAGAGAAGCCACTTTATTCCCTGTGGAGTGGAGGATGCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464003.1
CDS TCA 72 bp GGGGCAGAGATAACAGAACTCCATTCCGGGAGCTGGTaGGAGAGAGAGAGCACTCACTCTGGAGCCTCTCAT +
Preference number: 6 (lower is better)
Translates to: GAEITELHSGSW*ERESTHSGASH
Trigger: ATGAGAGGCTCCAGAGTGAGTGCTCTCTCTCTCTCACCAGCTCCCGGAATGGAGTTCTGTTATCTCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467850.1
CDS TCA 72 bp ACAAGCAGCCTGCCACCGTACCTCACTGAGGTATGGTaGCTGCAGGTACTGACTGCAGGCTGTACACAGAAG +
Preference number: 6 (lower is better)
Translates to: TSSLPPYLTEVW*LQVLTAGCTQK
Trigger: CTTCTGTGTACAGCCTGCAGTCAGTACCTGCAGTCACCATACCTCAGTGAGGTACGGTGGCAGGCTGCTTGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485684.5
CDS TCA 72 bp TCCTTCTCTTACAAGCAGCCTGCCACCGTACCTCACTaGGGTATGGTGACTGCAGGTACTGACTGCAGGCTG +
Preference number: 6 (lower is better)
Translates to: SFSYKQPATVPH*GMVTAGTDCRL
Trigger: CAGCCTGCAGTCAGTACCTGCAGTCACCATACCTCAGTGAGGTACGGTGGCAGGCTGCTTGTAAGAGAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485684.5
CDS GCA 72 bp AGGGGGCGCCAGACCCTGAGGTTGCAGAAGAAGAATTaGTCCAGTCCACCTCGTATTCATCTGCAAAAGCCG +
Preference number: 6 (lower is better)
Translates to: RGRQTLRLQKKN*SSPPRIHLQKP
Trigger: CGGCTTTTGCAGATGAATACGAGGTGGACTGGAGCAATTCTTCTTCTGCAACCTCAGGGTCTGGCGCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412873.2
CDS GCA 72 bp CCCAAACAGCCTGTGGGTGCCCAGGATTTGCATTTCTaGAAGTGGCTGGAGGGAGGAGTCAAGGGAAGTTCA +
Preference number: 6 (lower is better)
Translates to: PKQPVGAQDLHF*KWLEGGVKGSS
Trigger: TGAACTTCCCTTGACTCCTCCCTCCAGCCACTTGCAGAAATGCAAATCCTGGGCACCCACAGGCTGTTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464003.1
CDS CCA 72 bp ACCTCTCCGGGTATACCCGCACATACTGTGCCGGAATaGGGTCAAACCTTCGGATGTCAGGGGTGTCATAGT +
Preference number: 6 (lower is better)
Translates to: TSPGIPAHTVPE*GQTFGCQGCHS
Trigger: ACTATGACACCCCTGACATCCGAAGGTTTGACCCCATTCCGGCACAGTATGTGCGGGTATACCCGGAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
CDS CCA 72 bp GCCTCCAAGAACAGCCTACCTTTGGCTGCTGGGTCCTaGGGTCCTGAATGTATTCCCAGTCCTTGCCGTTTA +
Preference number: 6 (lower is better)
Translates to: ASKNSLPLAAGS*GPECIPSPCRL
Trigger: TAAACGGCAAGGACTGGGAATACATTCAGGACCCCAGGACCCAGCAGCCAAAGGTAGGCTGTTCTTGGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417189.5
ENST00000478054.1
CDS CCA 72 bp GAGGAGTCAAGGGAAGTTCACCAGAGATGGTGGCCTTaGATTGCACTGAGTCAGGCAAAGCTGCGGCTTGTG +
Preference number: 6 (lower is better)
Translates to: EESREVHQRWWP*IALSQAKLRLV
Trigger: CACAAGCCGCAGCTTTGCCTGACTCAGTGCAATCCAAGGCCACCATCTCTGGTGAACTTCCCTTGACTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464003.1
CDS CAA 72 bp AGGTCCACCTGGAGATACTCCTTGTTGGAATCCAAGTaGGGGGTCCAGCCATTGTCATCACCATGGAGCCGG +
Preference number: 6 (lower is better)
Translates to: RSTWRYSLLESK*GVQPLSSPWSR
Trigger: CCGGCTCCATGGTGATGACAATGGCTGGACCCCCAACTTGGATTCCAACAAGGAGTATCTCCAGGTGGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
CDS CAA 72 bp GAGGGGGCGCCAGACCCTGAGGTTGCAGAAGAAGAATaGCTCCAGTCCACCTCGTATTCATCTGCAAAAGCC +
Preference number: 6 (lower is better)
Translates to: EGAPDPEVAEEE*LQSTSYSSAKA
Trigger: GGCTTTTGCAGATGAATACGAGGTGGACTGGAGCAATTCTTCTTCTGCAACCTCAGGGTCTGGCGCCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412873.2
CDS CAA 72 bp CTCCACTCCACAGGGAATAAAGTGGCTTCTCTCTGTTaGCCCAGACGGCCCGTAGTCTCGCCCTTTTGTCCT +
Preference number: 6 (lower is better)
Translates to: LHSTGNKVASLC*PRRPVVSPFCP
Trigger: AGGACAAAAGGGCGAGACTACGGGCCGTCTGGGCAAACAGAGAGAAGCCACTTTATTCCCTGTGGAGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464003.1
CDS CAA 90 bp GTCAGGGAGAGGATCCCCGTCGATGAACGAAGTTCAGAGGGTGTTTaGGTCCCACAGTACTTGCCAATCAGGGGGCCAACATGTGGAATG +
Preference number: 6 (lower is better)
Translates to: VRERIPVDERSSEGV*VPQYLPIRGPTCGM
Trigger: CATTCCACATGTTGGCCCCCTGATTGGCAAGTACTGTGGGACCAAAACACCCTCTGAACTTCGTTCATCGACGGGGATCCTCTCCCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
ENST00000477199.1
CDS CAA 90 bp AGCGTTTCCCTCCTGAGTCCTGGTGGCTTGTCTTCACCTCTATTCTaGCTGGAATTTCCACCTCACCAGGAGGAGAGTAGCTCCTTGGGC +
Preference number: 6 (lower is better)
Translates to: SVSLLSPGGLSSPLF*LEFPPHQEESSSLG
Trigger: GCCCAAGGAGCTACTCTCCTCCTGGTGAGGTGGAAATTCCAGCAAGAATAGAGGTGAAGACAAGCCACCAGGACTCAGGAGGGAAACGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417189.5
CDS CAA 90 bp GCCAGCTCTTTTCTTTGTCGGTCGAGGGGGCGCCAGACCCTGAGGTaGCAGAAGAAGAATTGCTCCAGTCCACCTCGTATTCATCTGCAA +
Preference number: 6 (lower is better)
Translates to: ASSFLCRSRGRQTLR*QKKNCSSPPRIHLQ
Trigger: TTGCAGATGAATACGAGGTGGACTGGAGCAATTCTTCTTCTGCAACCTCAGGGTCTGGCGCCCCCTCGACCGACAAAGAAAAGAGCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412873.2
CDS CAA 90 bp AGCGTTTCCCTCCTGAGTCCTGGTGGCTTGTCTTCACCTCTATTCTaGCTGGAATTTCCACCTCACCAGGAGGAGAGTAGCTCCTCCACC +
Preference number: 6 (lower is better)
Translates to: SVSLLSPGGLSSPLF*LEFPPHQEESSSST
Trigger: GGTGGAGGAGCTACTCTCCTCCTGGTGAGGTGGAAATTCCAGCAAGAATAGAGGTGAAGACAAGCCACCAGGACTCAGGAGGGAAACGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450507.5
CDS CAA 90 bp CAAGAGACAGTGAGGCTCTCAATCCCCTTCCCGCATCTACAGGTGTaGCTAGTGCCATCTAGCGGCAGGAAGGTGTGGCGTCTCTTTTCT +
Preference number: 6 (lower is better)
Translates to: QETVRLSIPFPHLQV*LVPSSGRKVWRLFS
Trigger: AGAAAAGAGACGCCACACCTTCCTGCCGCTAGATGGCACTAGCAACACCTGTAGATGCGGGAAGGGGATTGAGAGCCTCACTGTCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472299.5
CDS TCA 72 bp GTCCGTGTGAAAGGTCAGGGAGAGGATCCCCGTCGATaGACGAAGTTCAGAGGGTGTTTTGGTCCCACAGTA +
Preference number: 6 (lower is better)
Translates to: VRVKGQGEDPRR*TKFRGCFGPTV
Trigger: TACTGTGGGACCAAAACACCCTCTGAACTTCGTTCATCGACGGGGATCCTCTCCCTGACCTTTCACACGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
ENST00000477199.1
CDS TCA 72 bp TTTCCCTGGAAATCGCTCCCTGTGTTGCGATGGCCGTaGGCATGGTTAAAAAGCGCAGGTCCACCTGGAGAT +
Preference number: 6 (lower is better)
Translates to: FPWKSLPVLRWP*AWLKSAGPPGD
Trigger: ATCTCCAGGTGGACCTGCGCTTTTTAACCATGCTCACGGCCATCGCAACACAGGGAGCGATTTCCAGGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
CDS TCA 72 bp TGCTGGCACGTCTTTACCCAGCCTTTCTGGGAGCTGTaGGTCTCCACAACCCAAAGAGAGTCAGGCGAAACA +
Preference number: 6 (lower is better)
Translates to: CWHVFTQPFWEL*VSTTQRESGET
Trigger: TGTTTCGCCTGACTCTCTTTGGGTTGTGGAGACTCACAGCTCCCAGAAAGGCTGGGTAAAGACGTGCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485684.5
CDS GCA 72 bp TGTTTTGGGTGCTGTTCTTGCTTCGGCCCTCAGCAGTaGGAGCCACGGTCTTGCTCTAGCTTAATGGTTAGG +
Preference number: 6 (lower is better)
Translates to: CFGCCSCFGPQQ*EPRSCSSLMVR
Trigger: CCTAACCATTAAGCTAGAGCAAGACCGTGGCTCGCACTGCTGAGGGCCGAAGCAAGAACAGCACCCAAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS GCA 72 bp TTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTCTTaGTTCGGCCCTCAGCAGTGCGAGCCACGGTCTTGC +
Preference number: 6 (lower is better)
Translates to: FAVFLVCFGCCS*FGPQQCEPRSC
Trigger: GCAAGACCGTGGCTCGCACTGCTGAGGGCCGAAGCAAGAACAGCACCCAAAACAAACGAGAAAGACTGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS CCA 72 bp GGTCTGAGGGCGGATTCTAACAAACCTTGTCAGCAGTaGAGCGTGGAGCTTGTTCAGAACCACCTCAGTTGC +
Preference number: 6 (lower is better)
Translates to: GLRADSNKPCQQ*SVELVQNHLSC
Trigger: GCAACTGAGGTGGTTCTGAACAAGCTCCACGCTCCACTGCTGACAAGGTTTGTTAGAATCCGCCCTCAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
ENST00000478054.1
CDS CCA 72 bp GCATGTTCCCTTCGAACAGCTTTGGCTGCTGGGTCCTaGGGTCCTGAATGTATTCCCAGTCCTTGCCGTTTA +
Preference number: 6 (lower is better)
Translates to: ACSLRTALAAGS*GPECIPSPCRL
Trigger: TAAACGGCAAGGACTGGGAATACATTCAGGACCCCAGGACCCAGCAGCCAAAGCTGTTCGAAGGGAACATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
CDS CAA 72 bp AGGATCCCCGTCGATGAACGAAGTTCAGAGGGTGTTTaGGTCCCACAGTACTTGCCAATCAGGGGGCCAACA +
Preference number: 6 (lower is better)
Translates to: RIPVDERSSEGV*VPQYLPIRGPT
Trigger: TGTTGGCCCCCTGATTGGCAAGTACTGTGGGACCAAAACACCCTCTGAACTTCGTTCATCGACGGGGATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
ENST00000477199.1
CDS CAA 72 bp GTTTGCAGTCTTTCTCGTTTGTTTTGGGTGCTGTTCTaGCTTCGGCCCTCAGCAGTGCGAGCCACGGTCTTG +
Preference number: 6 (lower is better)
Translates to: VCSLSRLFWVLF*LRPSAVRATVL
Trigger: CAAGACCGTGGCTCGCACTGCTGAGGGCCGAAGCAAGAACAGCACCCAAAACAAACGAGAAAGACTGCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS CAA 72 bp TTTCTTTGTCGGTCGAGGGGGCGCCAGACCCTGAGGTaGCAGAAGAAGAATTGCTCCAGTCCACCTCGTATT +
Preference number: 6 (lower is better)
Translates to: FLCRSRGRQTLR*QKKNCSSPPRI
Trigger: AATACGAGGTGGACTGGAGCAATTCTTCTTCTGCAACCTCAGGGTCTGGCGCCCCCTCGACCGACAAAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000467850.1
CDS CAA 72 bp CAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTaGAGGGTAACGTTACAGAGGCCTCCAAGAACAGCC +
Preference number: 6 (lower is better)
Translates to: QSQLPVPHLASL*RVTLQRPPRTA
Trigger: GGCTGTTCTTGGAGGCCTCTGTAACGTTACCCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417189.5
ENST00000478054.1
CDS CAA 72 bp ACTCATCTTGGCGATCGCTGGCTTTCGGGTCAGGCTTaGGTCTCATCCTTCCCAGGCATGAAAGCCAAGTCT +
Preference number: 6 (lower is better)
Translates to: THLGDRWLSGQA*VSSFPGMKAKS
Trigger: AGACTTGGCTTTCATGCCTGGGAAGGATGAGACCAAAGCCTGACCCGAAAGCCAGCGATCGCCAAGATGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468256.1
CDS CAA 90 bp GCCAGCTCTTTTCTTTGTCGGTCGAGGGGGCGCCAGACCCTGAGGTaGCAGAAGAAGAATTGCTCCAGTCCACCTCGTATTCATCATCAA +
Preference number: 6 (lower is better)
Translates to: ASSFLCRSRGRQTLR*QKKNCSSPPRIHHQ
Trigger: TTGATGATGAATACGAGGTGGACTGGAGCAATTCTTCTTCTGCAACCTCAGGGTCTGGCGCCCCCTCGACCGACAAAGAAAAGAGCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357785.10
ENST00000360409.7
ENST00000467850.1
CDS TCA 72 bp GGGATGGGGTGGGTGCTGGGGCTGTTTGAGAACTCCTaGACAAGCTGTGTATTACATGCAGGTGGGTGTTTT +
Preference number: 6 (lower is better)
Translates to: GMGWVLGLFENS*TSCVLHAGGCF
Trigger: AAAACACCCACCTGCATGTAATACACAGCTTGTTCAGGAGTTCTCAAACAGCCCCAGCACCCACCCCATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464003.1
CDS GCA 72 bp AACGAAGTTCAGAGGGTGTTTTGGTCCCACAGTACTTaGCAATCAGGGGGCCAACATGTGGAATGCCATCCC +
Preference number: 6 (lower is better)
Translates to: NEVQRVFWSHST*QSGGQHVECHP
Trigger: GGGATGGCATTCCACATGTTGGCCCCCTGATTGGCAAGTACTGTGGGACCAAAACACCCTCTGAACTTCGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
ENST00000477199.1
CDS GCA 72 bp GGTACCCTGGAACTGCAAAAGCCGAGATGGGTTCCATaGAGTTCTCCAGTGGGACATCAGTGCTTATCCGAA +
Preference number: 6 (lower is better)
Translates to: GTLELQKPRWVP*SSPVGHQCLSE
Trigger: TTCGGATAAGCACTGATGTCCCACTGGAGAACTGCATGGAACCCATCTCGGCTTTTGCAGTTCCAGGGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485684.5
CDS CCA 72 bp GGGCGGATTCTAACAAACCTTGTCAGCAGTGGAGCGTaGAGCTTGTTCAGAACCACCTCAGTTGCATCGTTG +
Preference number: 6 (lower is better)
Translates to: GRILTNLVSSGA*SLFRTTSVASL
Trigger: CAACGATGCAACTGAGGTGGTTCTGAACAAGCTCCACGCTCCACTGCTGACAAGGTTTGTTAGAATCCGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
ENST00000478054.1
CDS CAA 72 bp GAACGAAGTTCAGAGGGTGTTTTGGTCCCACAGTACTaGCCAATCAGGGGGCCAACATGTGGAATGCCATCC +
Preference number: 6 (lower is better)
Translates to: ERSSEGVLVPQY*PIRGPTCGMPS
Trigger: GGATGGCATTCCACATGTTGGCCCCCTGATTGGCAAGTACTGTGGGACCAAAACACCCTCTGAACTTCGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
ENST00000477199.1
CDS CAA 90 bp GGACATCATCAGTCTCAACTCCCTGTACCACACTTAGCCTCCCTGTaGAGGGTAACGTTACAGAGGCCTCCAAGAACAGCCTACCTTTGG +
Preference number: 6 (lower is better)
Translates to: GHHQSQLPVPHLASL*RVTLQRPPRTAYLW
Trigger: CCAAAGGTAGGCTGTTCTTGGAGGCCTCTGTAACGTTACCCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417189.5
ENST00000478054.1
CDS CAA 90 bp ATCTCCATCTTGGGTTTGGCCAGGATGGTAAAGGTGCAGTCCAAGTaGTGTGGATACTTCTCAGGAAACCCAGGAGATTCGATGGTCCCG +
Preference number: 6 (lower is better)
Translates to: ISILGLARMVKVQSK*CGYFSGNPGDSMVP
Trigger: CGGGACCATCGAATCTCCTGGGTTTCCTGAGAAGTATCCACACAACTTGGACTGCACCTTTACCATCCTGGCCAAACCCAAGATGGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
ENST00000477199.1
CDS CAA 90 bp AAGTGCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTaGGGTGCTGTTCTTGCTTCGGCCCTCAGCAGTGCGAGCCACGGT +
Preference number: 6 (lower is better)
Translates to: KCKIEATCLQSFSFV*GAVLASALSSASHG
Trigger: ACCGTGGCTCGCACTGCTGAGGGCCGAAGCAAGAACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS CAA 90 bp CAGAGGTTTCTAATGGTCAGCGTTTCCCTCCTGAGTCCTGGTGGCTaGTCTTCACCTCTATTCTTGCTGGAATTTCCACCTCACCAGGAG +
Preference number: 6 (lower is better)
Translates to: QRFLMVSVSLLSPGG*SSPLFLLEFPPHQE
Trigger: CTCCTGGTGAGGTGGAAATTCCAGCAAGAATAGAGGTGAAGACAAGCCACCAGGACTCAGGAGGGAAACGCTGACCATTAGAAACCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357785.10
ENST00000360409.7
ENST00000417189.5
ENST00000450507.5
ENST00000464003.1
ENST00000478013.1
CDS CAA 90 bp CAGATAGGATTCAGGTGCAATCCGTCATGCCTCGGAGCAGCACTTTaGGTGGTTCATCTTGACCTTGTGCTTAAGGCCATCGTAGAGCTC +
Preference number: 6 (lower is better)
Translates to: QIGFRCNPSCLGAAL*VVHLDLVLKAIVEL
Trigger: GAGCTCTACGATGGCCTTAAGCACAAGGTCAAGATGAACCACCAAAAGTGCTGCTCCGAGGCATGACGGATTGCACCTGAATCCTATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357785.10
ENST00000360409.7
ENST00000467850.1
CDS CAA 90 bp ATTCATTTAACTCATCTTGGCGATCGCTGGCTTTCGGGTCAGGCTTaGGTCTCATCCTTCCCAGGCATGAAAGCCAAGTCTGCCAGTGGT +
Preference number: 6 (lower is better)
Translates to: IHLTHLGDRWLSGQA*VSSFPGMKAKSASG
Trigger: ACCACTGGCAGACTTGGCTTTCATGCCTGGGAAGGATGAGACCAAAGCCTGACCCGAAAGCCAGCGATCGCCAAGATGAGTTAAATGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468256.1
CDS TCA 72 bp ATTCCCAGTCCTTGCCGTTTAGGCTGTAGGAGACTTTaGACTTGCGCACAAATGCTCTGGCTTCCACAGCAG +
Preference number: 6 (lower is better)
Translates to: IPSPCRLGCRRL*TCAQMLWLPQQ
Trigger: CTGCTGTGGAAGCCAGAGCATTTGTGCGCAAGTTCAAAGTCTCCTACAGCCTAAACGGCAAGGACTGGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
ENST00000478054.1
CDS GCA 72 bp CCTCTTGCTGGAATGAAACGTCAGATAGGATTCAGGTaGAATCCGTCATGCCTCGGAGCAGCACTTTTGGTG +
Preference number: 6 (lower is better)
Translates to: PLAGMKRQIGFR*NPSCLGAALLV
Trigger: CACCAAAAGTGCTGCTCCGAGGCATGACGGATTGCACCTGAATCCTATCTGACGTTTCATTCCAGCAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357785.10
ENST00000360409.7
ENST00000467850.1
CDS CCA 72 bp TCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTTaGGTGCTGTTCTTGCTTCGGCCCTCAGCAGTGCGA +
Preference number: 6 (lower is better)
Translates to: SRQHVCSLSRLF*VLFLLRPSAVR
Trigger: TCGCACTGCTGAGGGCCGAAGCAAGAACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS CCA 72 bp CATGTATTTCTGGGATGTCCACTGCAAAAGCCGAGATaGGTTCCATGCAGTTCTCCAGTGGGACATCAGTGC +
Preference number: 6 (lower is better)
Translates to: HVFLGCPLQKPR*VPCSSPVGHQC
Trigger: GCACTGATGTCCCACTGGAGAACTGCATGGAACCCATCTCGGCTTTTGCAGTGGACATCCCAGAAATACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000467850.1
CDS CCA 72 bp CTCCAGTCATCGAATGCACCTCCTTATTCCCTTGACTaGACACCGGGTCCTAAATGTGGCAACTCTTTCTCC +
Preference number: 6 (lower is better)
Translates to: LQSSNAPPYSLD*TPGPKCGNSFS
Trigger: GGAGAAAGAGTTGCCACATTTAGGACCCGGTGTCCAGTCAAGGGAATAAGGAGGTGCATTCGATGACTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485684.5
CDS CAA 72 bp ATCGAGGCAACATGTTTGCAGTCTTTCTCGTTTGTTTaGGGTGCTGTTCTTGCTTCGGCCCTCAGCAGTGCG +
Preference number: 6 (lower is better)
Translates to: IEATCLQSFSFV*GAVLASALSSA
Trigger: CGCACTGCTGAGGGCCGAAGCAAGAACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS CAA 72 bp GAGGGGGCGCCAGACCCTGAGGTTGCAGAAGAAGAATaGCTCCAGTCCACCTCGTATTCATCATCAATTTCA +
Preference number: 6 (lower is better)
Translates to: EGAPDPEVAEEE*LQSTSYSSSIS
Trigger: TGAAATTGATGATGAATACGAGGTGGACTGGAGCAATTCTTCTTCTGCAACCTCAGGGTCTGGCGCCCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357785.10
ENST00000360409.7
ENST00000467850.1
CDS CAA 72 bp TTCAGGTGCAATCCGTCATGCCTCGGAGCAGCACTTTaGGTGGTTCATCTTGACCTTGTGCTTAAGGCCATC +
Preference number: 6 (lower is better)
Translates to: FRCNPSCLGAAL*VVHLDLVLKAI
Trigger: GATGGCCTTAAGCACAAGGTCAAGATGAACCACCAAAAGTGCTGCTCCGAGGCATGACGGATTGCACCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357785.10
ENST00000360409.7
ENST00000467850.1
CDS CAA 72 bp GCAGTGGAGCGTGGAGCTTGTTCAGAACCACCTCAGTaGCATCGTTGTTGGCTTGAAATACAATGGCCCTGT +
Preference number: 6 (lower is better)
Translates to: AVERGACSEPPQ*HRCWLEIQWPC
Trigger: ACAGGGCCATTGTATTTCAAGCCAACAACGATGCAACTGAGGTGGTTCTGAACAAGCTCCACGCTCCACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478054.1
CDS CAA 90 bp TCATGCTCCAGGTCAAAGATCAGGAACTGCAGGATGATCTCCATCTaGGGTTTGGCCAGGATGGTAAAGGTGCAGTCCAAGTTGTGTGGA +
Preference number: 6 (lower is better)
Translates to: SCSRSKIRNCRMISI*GLARMVKVQSKLCG
Trigger: TCCACACAACTTGGACTGCACCTTTACCATCCTGGCCAAACCCAAGATGGAGATCATCCTGCAGTTCCTGATCTTTGACCTGGAGCATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
ENST00000477199.1
CDS CAA 90 bp ACCTTGTCAGCAGTGGAGCGTGGAGCTTGTTCAGAACCACCTCAGTaGCATCGTTGTTGGCTTGAAATACCTTGTGGTTTTTGCCATGCC +
Preference number: 6 (lower is better)
Translates to: TLSAVERGACSEPPQ*HRCWLEIPCGFCHA
Trigger: GGCATGGCAAAAACCACAAGGTATTTCAAGCCAACAACGATGCAACTGAGGTGGTTCTGAACAAGCTCCACGCTCCACTGCTGACAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
CDS GCA 72 bp AGATGGGTTCCATGCAGTTCTCCAGTGGGACATCAGTaGTTATCCGAATGTCATCAATGGCAATCTCTCCGG +
Preference number: 6 (lower is better)
Translates to: RWVPCSSPVGHQ*LSECHQWQSLR
Trigger: CCGGAGAGATTGCCATTGATGACATTCGGATAAGCACTGATGTCCCACTGGAGAACTGCATGGAACCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000467850.1
ENST00000472299.5
ENST00000485684.5
CDS GCA 72 bp AGGGGGCGCCAGACCCTGAGGTTGCAGAAGAAGAATTaGTCCAGTCCACCTCGTATTCATCATCAATTTCAT +
Preference number: 6 (lower is better)
Translates to: RGRQTLRLQKKN*SSPPRIHHQFH
Trigger: ATGAAATTGATGATGAATACGAGGTGGACTGGAGCAATTCTTCTTCTGCAACCTCAGGGTCTGGCGCCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357785.10
ENST00000360409.7
ENST00000467850.1
CDS GCA 72 bp CATCTCATGGATGGGATACACAGTGGGACAGGACGGTaGTTACTTGCAGTCGTGCTTCTCGATTTCAAAGTG +
Preference number: 6 (lower is better)
Translates to: HLMDGIHSGTGR*LLAVVLLDFKV
Trigger: CACTTTGAAATCGAGAAGCACGACTGCAAGTAAGCACCGTCCTGTCCCACTGTGTATCCCATCCATGAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478013.1
CDS GCA 72 bp CAGCCAGTACAAAGAGGGCACAGCAATCCTCACAATTaGTGGCATCAAACAGGTCATGAAGAACCCCCATCA +
Preference number: 6 (lower is better)
Translates to: QPVQRGHSNPHN*WHQTGHEEPPS
Trigger: TGATGGGGGTTCTTCATGACCTGTTTGATGCCAGCAATTGTGAGGATTGCTGTGCCCTCTTTGTACTGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485684.5
CDS CCA 72 bp CCAGTGGGACATCAGTGCTTATCCGAATGTCATCAATaGCAATCTCTCCGGAACGTCCTTTCCCTATCACTC +
Preference number: 6 (lower is better)
Translates to: PVGHQCLSECHQ*QSLRNVLSLSL
Trigger: GAGTGATAGGGAAAGGACGTTCCGGAGAGATTGCCATTGATGACATTCGGATAAGCACTGATGTCCCACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000467850.1
ENST00000472299.5
ENST00000485684.5
CDS CCA 72 bp TGCAAAAGCCGAGATGGGTTCCATGCAGTTCTCCAGTaGGACATCAGTGCTTATCCGAATGTCATCAATGGC +
Preference number: 6 (lower is better)
Translates to: CKSRDGFHAVLQ*DISAYPNVING
Trigger: GCCATTGATGACATTCGGATAAGCACTGATGTCCCACTGGAGAACTGCATGGAACCCATCTCGGCTTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000467850.1
ENST00000472299.5
ENST00000485684.5
CDS CAA 72 bp CTAATGGTCAGCGTTTCCCTCCTGAGTCCTGGTGGCTaGTCTTCACCTCTATTCTTGCTGGAATTTCCACCT +
Preference number: 6 (lower is better)
Translates to: LMVSVSLLSPGG*SSPLFLLEFPP
Trigger: AGGTGGAAATTCCAGCAAGAATAGAGGTGAAGACAAGCCACCAGGACTCAGGAGGGAAACGCTGACCATTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357785.10
ENST00000360409.7
ENST00000417189.5
ENST00000450507.5
ENST00000464003.1
ENST00000478013.1
CDS CAA 72 bp CATCTAGCGGCAGGAAGGTGTGGCGTCTCTTTTCTCTaGCGAGATTTGACAAATTTGGAGGTTGATTCCCCC +
Preference number: 6 (lower is better)
Translates to: HLAAGRCGVSFL*RDLTNLEVDSP
Trigger: GGGGGAATCAACCTCCAAATTTGTCAAATCTCGCAAGAGAAAAGAGACGCCACACCTTCCTGCCGCTAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472299.5
CDS CAA 72 bp TCTAGCTCCAGTCATCGAATGCACCTCCTTATTCCCTaGACTGGACACCGGGTCCTAAATGTGGCAACTCTT +
Preference number: 6 (lower is better)
Translates to: SSSSHRMHLLIP*TGHRVLNVATL
Trigger: AAGAGTTGCCACATTTAGGACCCGGTGTCCAGTCAAGGGAATAAGGAGGTGCATTCGATGACTGGAGCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485684.5
CDS CAA 90 bp TCCAGGTCAAAGATCAGGAACTGCAGGATGATCTCCATCTTGGGTTaGGCCAGGATGGTAAAGGTGCAGTCCAAGTTGTGTGGATACTTC +
Preference number: 6 (lower is better)
Translates to: SRSKIRNCRMISILG*ARMVKVQSKLCGYF
Trigger: GAAGTATCCACACAACTTGGACTGCACCTTTACCATCCTGGCCAAACCCAAGATGGAGATCATCCTGCAGTTCCTGATCTTTGACCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
ENST00000477199.1
CDS CAA 90 bp GCATGGTCATACATCCAACCACAGGGCTCCTCGAGGAAATCGAAGTaGCAATTGAATCCCGAAGGGAGCTGCAAATCTTTGTCATCCTCA +
Preference number: 6 (lower is better)
Translates to: AWSYIQPQGSSRKSK*QLNPEGSCKSLSSS
Trigger: TGAGGATGACAAAGATTTGCAGCTCCCTTCGGGATTCAATTGCAACTTCGATTTCCTCGAGGAGCCCTGTGGTTGGATGTATGACCATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000460987.1
CDS CAA 90 bp ACCTTGTCAGCAGTGGAGCGTGGAGCTTGTTCAGAACCACCTCAGTaGCATCGTTGTTGGCTTGAAATACAATGGCCCTGTGTCAATCAA +
Preference number: 6 (lower is better)
Translates to: TLSAVERGACSEPPQ*HRCWLEIQWPCVNQ
Trigger: TTGATTGACACAGGGCCATTGTATTTCAAGCCAACAACGATGCAACTGAGGTGGTTCTGAACAAGCTCCACGCTCCACTGCTGACAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478054.1
CDS CAA 90 bp TTAAAGTGCTCTAGCTCCAGTCATCGAATGCACCTCCTTATTCCCTaGACTGGACACCGGGTCCTAAATGTGGCAACTCTTTCTCCTGAG +
Preference number: 6 (lower is better)
Translates to: LKCSSSSHRMHLLIP*TGHRVLNVATLSPE
Trigger: CTCAGGAGAAAGAGTTGCCACATTTAGGACCCGGTGTCCAGTCAAGGGAATAAGGAGGTGCATTCGATGACTGGAGCTAGAGCACTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485684.5
CDS CAA 90 bp ACTCAGGCCAACTGCAGTGACGCATTTAGAGTGGCTCCTAAATGTTaGGCATTAGAAACCGGTGTGGGAACTTCAGCAGTGTCCGCTAAT +
Preference number: 6 (lower is better)
Translates to: TQANCSDAFRVAPKC*ALETGVGTSAVSAN
Trigger: ATTAGCGGACACTGCTGAAGTTCCCACACCGGTTTCTAATGCCAAACATTTAGGAGCCACTCTAAATGCGTCACTGCAGTTGGCCTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485684.5
CDS TCA 72 bp AACCACAGGGCTCCTCGAGGAAATCGAAGTTGCAATTaGATCCCGAAGGGAGCTGCAAATCTTTGTCATCCT +
Preference number: 6 (lower is better)
Translates to: NHRAPRGNRSCN*IPKGAANLCHP
Trigger: AGGATGACAAAGATTTGCAGCTCCCTTCGGGATTCAATTGCAACTTCGATTTCCTCGAGGAGCCCTGTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000460987.1
CDS TCA 72 bp ACTGGCTGTCTTAGAGCTGATGAGTGGCAAATTGGGTaGGATGATTTGGAGTCAGGGAGCATATCTAGGTGG +
Preference number: 6 (lower is better)
Translates to: TGCLRADEWQIG*DDLESGSISRW
Trigger: CCACCTAGATATGCTCCCTGACTCCAAATCATCTCACCCAATTTGCCACTCATCAGCTCTAAGACAGCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485684.5
CDS GCA 72 bp ATGAAACGTCAGATAGGATTCAGGTGCAATCCGTCATaGCTCGGAGCAGCACTTTTGGTGGTTCATCTTGAC +
Preference number: 6 (lower is better)
Translates to: MKRQIGFRCNPS*LGAALLVVHLD
Trigger: GTCAAGATGAACCACCAAAAGTGCTGCTCCGAGGCATGACGGATTGCACCTGAATCCTATCTGACGTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357785.10
ENST00000360409.7
ENST00000467850.1
CDS GCA 72 bp AGAAGAAGAATTGCTCCAGTCCACCTCGTATTCATCTaGAAAAGCCGAGATGGGTTCCATGCAGTTCTCCAG +
Preference number: 6 (lower is better)
Translates to: RRRIAPVHLVFI*KSRDGFHAVLQ
Trigger: CTGGAGAACTGCATGGAACCCATCTCGGCTTTTGCAGATGAATACGAGGTGGACTGGAGCAATTCTTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412873.2
CDS CCA 72 bp TTTGGCCAGGATGGTAAAGGTGCAGTCCAAGTTGTGTaGATACTTCTCAGGAAACCCAGGAGATTCGATGGT +
Preference number: 6 (lower is better)
Translates to: FGQDGKGAVQVV*ILLRKPRRFDG
Trigger: ACCATCGAATCTCCTGGGTTTCCTGAGAAGTATCCACACAACTTGGACTGCACCTTTACCATCCTGGCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
ENST00000477199.1
CDS CCA 72 bp CAGGTGTTGCTAGTGCCATCTAGCGGCAGGAAGGTGTaGCGTCTCTTTTCTCTTGCGAGATTTGACAAATTT +
Preference number: 6 (lower is better)
Translates to: QVLLVPSSGRKV*RLFSLARFDKF
Trigger: AAATTTGTCAAATCTCGCAAGAGAAAAGAGACGCCACACCTTCCTGCCGCTAGATGGCACTAGCAACACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472299.5
CDS CCA 72 bp ATCCCCCTGCTCTTGAGGTTTTTGTTGCTACTGGAGTaGCCCTTGAAGCAACATACTCTTCACATGCACGTT +
Preference number: 6 (lower is better)
Translates to: IPLLLRFLLLLE*PLKQHTLHMHV
Trigger: AACGTGCATGTGAAGAGTATGTTGCTTCAAGGGCCACTCCAGTAGCAACAAAAACCTCAAGAGCAGGGGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000477199.1
CDS CAA 72 bp AAGATCAGGAACTGCAGGATGATCTCCATCTTGGGTTaGGCCAGGATGGTAAAGGTGCAGTCCAAGTTGTGT +
Preference number: 6 (lower is better)
Translates to: KIRNCRMISILG*ARMVKVQSKLC
Trigger: ACACAACTTGGACTGCACCTTTACCATCCTGGCCAAACCCAAGATGGAGATCATCCTGCAGTTCCTGATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
ENST00000477199.1
CDS CAA 72 bp GCAGTGGAGCGTGGAGCTTGTTCAGAACCACCTCAGTaGCATCGTTGTTGGCTTGAAATACCTTGTGGTTTT +
Preference number: 6 (lower is better)
Translates to: AVERGACSEPPQ*HRCWLEIPCGF
Trigger: AAAACCACAAGGTATTTCAAGCCAACAACGATGCAACTGAGGTGGTTCTGAACAAGCTCCACGCTCCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
CDS CAA 72 bp ATTCTAACAAACCTTGTCAGCAGTGGAGCGTGGAGCTaGTTCAGAACCACCTCAGTTGCATCGTTGTTGGCT +
Preference number: 6 (lower is better)
Translates to: ILTNLVSSGAWS*FRTTSVASLLA
Trigger: AGCCAACAACGATGCAACTGAGGTGGTTCTGAACAAGCTCCACGCTCCACTGCTGACAAGGTTTGTTAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000417189.5
ENST00000478054.1
CDS CAA 72 bp TACATCCAACCACAGGGCTCCTCGAGGAAATCGAAGTaGCAATTGAATCCCGAAGGGAGCTGCAAATCTTTG +
Preference number: 6 (lower is better)
Translates to: YIQPQGSSRKSK*QLNPEGSCKSL
Trigger: CAAAGATTTGCAGCTCCCTTCGGGATTCAATTGCAACTTCGATTTCCTCGAGGAGCCCTGTGGTTGGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000460987.1
ENST00000468256.1
CDS CAA 72 bp GCAAAATCGAGGCAACATGTTTGCAGTCTTTCTCGTTaGTTTTGGGTGCTGTTCTTGCTTCGGCCCTCAGCA +
Preference number: 6 (lower is better)
Translates to: AKSRQHVCSLSR*FWVLFLLRPSA
Trigger: TGCTGAGGGCCGAAGCAAGAACAGCACCCAAAACAAACGAGAAAGACTGCAAACATGTTGCCTCGATTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272849.7
ENST00000357118.8
CDS CAA 90 bp TCATACATCCAACCACAGGGCTCCTCGAGGAAATCGAAGTTGCAATaGAATCCCGAAGGGAGCTGCAAATCTTTGTCATCCTCAAAGCTG +
Preference number: 6 (lower is better)
Translates to: SYIQPQGSSRKSKLQ*NPEGSCKSLSSSKL
Trigger: CAGCTTTGAGGATGACAAAGATTTGCAGCTCCCTTCGGGATTCAATTGCAACTTCGATTTCCTCGAGGAGCCCTGTGGTTGGATGTATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272849.7
ENST00000357118.8
ENST00000357785.10
ENST00000360409.7
ENST00000412873.2
ENST00000460987.1
CDS CAA 90 bp GCATGGTCATACATCCAACCACAGGGCTCCTCGAGGAAATCGAAGTaGCAATTGAATCCCGAAGGGAGCTGCAAATCTTTGTCTAAAAGG +
Preference number: 6 (lower is better)
Translates to: AWSYIQPQGSSRKSK*QLNPEGSCKSLSKR
Trigger: CCTTTTAGACAAAGATTTGCAGCTCCCTTCGGGATTCAATTGCAACTTCGATTTCCTCGAGGAGCCCTGTGGTTGGATGTATGACCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468256.1
CDS CAA 90 bp CAGCTTTGTTCCTCACTGGCTGTCTTAGAGCTGATGAGTGGCAAATaGGGTGAGATGATTTGGAGTCAGGGAGCATATCTAGGTGGCAAA +
Preference number: 6 (lower is better)
Translates to: QLCSSLAVLELMSGK*GEMIWSQGAYLGGK
Trigger: TTTGCCACCTAGATATGCTCCCTGACTCCAAATCATCTCACCCAATTTGCCACTCATCAGCTCTAAGACAGCCAGTGAGGAACAAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485684.5
CDS CAA 90 bp CAATATATTCTATGTCGGTCTGTCATTCCCCTGTCGTCTGCAGCTTaGTTCCTCACTGGCTGTCTTAGAGCTGATGAGTGGCAAATTGGG +
Preference number: 6 (lower is better)
Translates to: QYILCRSVIPLSSAA*FLTGCLRADEWQIG
Trigger: CCCAATTTGCCACTCATCAGCTCTAAGACAGCCAGTGAGGAACAAAGCTGCAGACGACAGGGGAATGACAGACCGACATAGAATATATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485684.5
CDS TCA 72 bp GACAGCAAGTTGCAGTCGTGCTTCTCGATTTCAAAGTaGGGGTTGAAGTTGAGGACAATCTTCTGGTTGGGT +
Preference number: 6 (lower is better)
Translates to: DSKLQSCFSISK*GLKLRTIFWLG
Trigger: ACCCAACCAGAAGATTGTCCTCAACTTCAACCCTCACTTTGAAATCGAGAAGCACGACTGCAACTTGCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464003.1
CDS GCA 72 bp ATATCCTTCTCTCTCATGTATTTCTGGGATGTCCACTaGAAAAGCCGAGATGGGTTCCATGCAGTTCTCCAG +
Preference number: 6 (lower is better)
Translates to: ISFSLMYFWDVH*KSRDGFHAVLQ
Trigger: CTGGAGAACTGCATGGAACCCATCTCGGCTTTTGCAGTGGACATCCCAGAAATACATGAGAGAGAAGGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357785.10
ENST00000467850.1
CDS CAA 72 bp CAACCACAGGGCTCCTCGAGGAAATCGAAGTTGCAATaGAATCCCGAAGGGAGCTGCAAATCTTTGTCTAAA +
Preference number: 6 (lower is better)
Translates to: QPQGSSRKSKLQ*NPEGSCKSLSK
Trigger: TTTAGACAAAGATTTGCAGCTCCCTTCGGGATTCAATTGCAACTTCGATTTCCTCGAGGAGCCCTGTGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468256.1
CDS CAA 72 bp CCGGTGTGGGAACTTCAGCAGTGTCCGCTAATAGGTTaGCAAAGAGGGCAAAATGTAAAATCTGCTGCATTG +
Preference number: 6 (lower is better)
Translates to: PVWELQQCPLIG*QRGQNVKSAAL
Trigger: CAATGCAGCAGATTTTACATTTTGCCCTCTTTGCAAACCTATTAGCGGACACTGCTGAAGTTCCCACACCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485684.5
CDS CAA 72 bp AACTGCAGTGACGCATTTAGAGTGGCTCCTAAATGTTaGGCATTAGAAACCGGTGTGGGAACTTCAGCAGTG +
Preference number: 6 (lower is better)
Translates to: NCSDAFRVAPKC*ALETGVGTSAV
Trigger: CACTGCTGAAGTTCCCACACCGGTTTCTAATGCCAAACATTTAGGAGCCACTCTAAATGCGTCACTGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485684.5
CDS CAA 90 bp TCATACATCCAACCACAGGGCTCCTCGAGGAAATCGAAGTTGCAATaGAATCCCGAAGGGAGCTGCAAATCTTTGTCTAAAAGGGGAAAA +
Preference number: 6 (lower is better)
Translates to: SYIQPQGSSRKSKLQ*NPEGSCKSLSKRGK
Trigger: TTTTCCCCTTTTAGACAAAGATTTGCAGCTCCCTTCGGGATTCAATTGCAACTTCGATTTCCTCGAGGAGCCCTGTGGTTGGATGTATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468256.1
CDS TCA 72 bp AGTCTGCCAGTGGTTCCCATAGTAAGCAATTATGAATaGGGCTACCAAATGGCTTCAGGCTCTAATCAGCCT +
Preference number: 6 (lower is better)
Translates to: SLPVVPIVSNYE*GYQMASGSNQP
Trigger: AGGCTGATTAGAGCCTGAAGCCATTTGGTAGCCTCATTCATAATTGCTTACTATGGGAACCACTGGCAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468256.1
CDS TCA 72 bp AACCACAGGGCTCCTCGAGGAAATCGAAGTTGCAATTaGATCCCGAAGGGAGCTGCAAATCTTTGTCTAAAA +
Preference number: 6 (lower is better)
Translates to: NHRAPRGNRSCN*IPKGAANLCLK
Trigger: TTTTAGACAAAGATTTGCAGCTCCCTTCGGGATTCAATTGCAACTTCGATTTCCTCGAGGAGCCCTGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468256.1
CDS GCA 72 bp AAGATAACGAGTCTAGACGGCAGATATAAAAATGGCTaGCCTTATCTCTGCAATGCTGCCACTTGTAGGGGT +
Preference number: 6 (lower is better)
Translates to: KITSLDGRYKNG*PYLCNAATCRG
Trigger: ACCCCTACAAGTGGCAGCATTGCAGAGATAAGGGCAGCCATTTTTATATCTGCCGTCTAGACTCGTTATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485684.5
CDS TCA 72 bp CTTTCACTTCACCAACATAAGCATTACCTTGGGTCCTaGAGGTTAGAACTCGAATTCGACTGTAATCCAAAG +
Preference number: 6 (lower is better)
Translates to: LSLHQHKHYLGS*RLELEFDCNPK
Trigger: CTTTGGATTACAGTCGAATTCGAGTTCTAACCTTCAGGACCCAAGGTAATGCTTATGTTGGTGAAGTGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485684.5
CDS GCA 72 bp GCTAATAGGTTTGCAAAGAGGGCAAAATGTAAAATCTaGTGCATTGTAACAGCACAAACAACATTGCCATCA +
Preference number: 6 (lower is better)
Translates to: ANRFAKRAKCKI*CIVTAQTTLPS
Trigger: TGATGGCAATGTTGTTTGTGCTGTTACAATGCAGCAGATTTTACATTTTGCCCTCTTTGCAAACCTATTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485684.5
CDS CAA 72 bp AAGAGAACTGTAGCACTAAGAAGAAGATGCCTTTCTTaGTGGCCTCTGTCACATGGGTTATTTAAATGTTTG +
Preference number: 6 (lower is better)
Translates to: KRTVALRRRCLS*WPLSHGLFKCL
Trigger: CAAACATTTAAATAACCCATGTGACAGAGGCCACAAAGAAAGGCATCTTCTTCTTAGTGCTACAGTTCTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477199.1