Pregenerated sensors for NRON (Homo sapiens)
Ensembl gene IDs: ENSG00000253079Ensembl transcript IDs: ENST00000517270.1
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGAATGCAAATAAGCGTTATTAGCCTAATGATTTTGCCGTCGCCATaGTTGTGCGGCAGCAGTGTTGTGAATATGTCATCCGGCACCCGT | + |
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Preference number: 5 (lower is better) Translates to: RMQISVISLMILPSP*LCGSSVVNMSSGTR Trigger: ACGGGTGCCGGATGACATATTCACAACACTGCTGCCGCACAACCATGGCGACGGCAAAATCATTAGGCTAATAACGCTTATTTGCATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517270.1 |
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| CDS GCA 90 bp | CAAATAAGCGTTATTAGCCTAATGATTTTGCCGTCGCCATGGTTGTaGGGCAGCAGTGTTGTGAATATGTCATCCGGCACCCGTGAATTT | + |
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Preference number: 5 (lower is better) Translates to: QISVISLMILPSPWL*GSSVVNMSSGTREF Trigger: AAATTCACGGGTGCCGGATGACATATTCACAACACTGCTGCCGCACAACCATGGCGACGGCAAAATCATTAGGCTAATAACGCTTATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517270.1 |
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| CDS TCA 90 bp | ATGGTTGTGCGGCAGCAGTGTTGTGAATATGTCATCCGGCACCCGTaGATTTGGAAAGTGTGTCAAAACACAACTTCAATTAGTTTGCTC | + |
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Preference number: 5 (lower is better) Translates to: MVVRQQCCEYVIRHP*IWKVCQNTTSISLL Trigger: GAGCAAACTAATTGAAGTTGTGTTTTGACACACTTTCCAAATTCACGGGTGCCGGATGACATATTCACAACACTGCTGCCGCACAACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517270.1 |
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| CDS TCA 72 bp | TTTTGCCGTCGCCATGGTTGTGCGGCAGCAGTGTTGTaGATATGTCATCCGGCACCCGTGAATTTGGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: FCRRHGCAAAVL*ICHPAPVNLES Trigger: ACTTTCCAAATTCACGGGTGCCGGATGACATATTCACAACACTGCTGCCGCACAACCATGGCGACGGCAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517270.1 |
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| CDS GCA 72 bp | GTTATTAGCCTAATGATTTTGCCGTCGCCATGGTTGTaGGGCAGCAGTGTTGTGAATATGTCATCCGGCACC | + |
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Preference number: 6 (lower is better) Translates to: VISLMILPSPWL*GSSVVNMSSGT Trigger: GGTGCCGGATGACATATTCACAACACTGCTGCCGCACAACCATGGCGACGGCAAAATCATTAGGCTAATAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517270.1 |
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| CDS CAA 72 bp | AGCGTTATTAGCCTAATGATTTTGCCGTCGCCATGGTaGTGCGGCAGCAGTGTTGTGAATATGTCATCCGGC | + |
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Preference number: 6 (lower is better) Translates to: SVISLMILPSPW*CGSSVVNMSSG Trigger: GCCGGATGACATATTCACAACACTGCTGCCGCACAACCATGGCGACGGCAAAATCATTAGGCTAATAACGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517270.1 |
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| CDS CAA 90 bp | ATGCAAATAAGCGTTATTAGCCTAATGATTTTGCCGTCGCCATGGTaGTGCGGCAGCAGTGTTGTGAATATGTCATCCGGCACCCGTGAA | + |
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Preference number: 6 (lower is better) Translates to: MQISVISLMILPSPW*CGSSVVNMSSGTRE Trigger: TTCACGGGTGCCGGATGACATATTCACAACACTGCTGCCGCACAACCATGGCGACGGCAAAATCATTAGGCTAATAACGCTTATTTGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517270.1 |
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| CDS CAA 90 bp | GCCGGCATGATAAGAATGCAAATAAGCGTTATTAGCCTAATGATTTaGCCGTCGCCATGGTTGTGCGGCAGCAGTGTTGTGAATATGTCA | + |
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Preference number: 6 (lower is better) Translates to: AGMIRMQISVISLMI*PSPWLCGSSVVNMS Trigger: TGACATATTCACAACACTGCTGCCGCACAACCATGGCGACGGCAAAATCATTAGGCTAATAACGCTTATTTGCATTCTTATCATGCCGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517270.1 |
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| CDS CCA 72 bp | ATAAGCGTTATTAGCCTAATGATTTTGCCGTCGCCATaGTTGTGCGGCAGCAGTGTTGTGAATATGTCATCC | + |
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Preference number: 6 (lower is better) Translates to: ISVISLMILPSP*LCGSSVVNMSS Trigger: GGATGACATATTCACAACACTGCTGCCGCACAACCATGGCGACGGCAAAATCATTAGGCTAATAACGCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517270.1 |
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| CDS TCA 72 bp | CGGCAGCAGTGTTGTGAATATGTCATCCGGCACCCGTaGATTTGGAAAGTGTGTCAAAACACAACTTCAATT | + |
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Preference number: 6 (lower is better) Translates to: RQQCCEYVIRHP*IWKVCQNTTSI Trigger: AATTGAAGTTGTGTTTTGACACACTTTCCAAATTCACGGGTGCCGGATGACATATTCACAACACTGCTGCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517270.1 |
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| CDS CAA 72 bp | ATAAGAATGCAAATAAGCGTTATTAGCCTAATGATTTaGCCGTCGCCATGGTTGTGCGGCAGCAGTGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: IRMQISVISLMI*PSPWLCGSSVV Trigger: CACAACACTGCTGCCGCACAACCATGGCGACGGCAAAATCATTAGGCTAATAACGCTTATTTGCATTCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517270.1 |
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