Pregenerated sensors for NRN1L (Homo sapiens)
Ensembl gene IDs: ENSG00000188038Ensembl transcript IDs: ENST00000339176.8, ENST00000576147.1, ENST00000576758.1
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGCTGCGCTCTGCAGAGCCTGGACAACCACCGCCAGAGCAGGGCTaGAGGTACGGGCGCTGCTACCCAACCCAACAAGCTAGGCCAGAG | + |
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Preference number: 1 (lower is better) Translates to: LLRSAEPGQPPPEQG*RYGRCYPTQQARPE Trigger: CTCTGGCCTAGCTTGTTGGGTTGGGTAGCAGCGCCCGTACCTCCAGCCCTGCTCTGGCGGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000576147.1 |
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| 3UTR-3UTR GCA 90 bp | ATACCTTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACCGCCTGGAGGTACGGGCGCTaGTACCCAACCCAACAAGCT | + |
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Preference number: 2 (lower is better) Translates to: IPLMKSPAALCRAWTTTAWRYGR*YPTQQA Trigger: AGCTTGTTGGGTTGGGTAGCAGCGCCCGTACCTCCA...GGCGGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAAGGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576147.1 |
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| 3UTR-3UTR CCA 90 bp | AATATAAATACCTTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCCGCCAGAGCAGGGCTaGAGGTACGGGCGCTGCTAC | + |
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Preference number: 2 (lower is better) Translates to: NINTFNEKPCCALQSLDNPPEQG*RYGRCY Trigger: GTAGCAGCGCCCGTACCTCCAGCCCTGCTCTGGCGG...GTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAAGGTATTTATATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| 3UTR CCA 72 bp | CCTTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTaGACAACCACCGCCAGAGCAGGGCTGGAGGTACGG | + |
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Preference number: 3 (lower is better) Translates to: PLMKSPAALCRA*TTTARAGLEVR Trigger: CCGTACCTCCAGCCCTGCTCTGGCGGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR CCA 90 bp | CAGAGCAGGGCTGGAGGTACGGGCGCTGCTACCCAACCCAACAAGCTAGGCCAGAGCAGCCGCCAGCAGTaGGGGCGCAGGGGCCATGGG | + |
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Preference number: 4 (lower is better) Translates to: QSRAGGTGAATQPNKLGQSSRQQ*GRRGHG Trigger: CCCATGGCCCCTGCGCCCCCACTGCTGGCGGCTGCT...CTGGCCTAGCTTGTTGGGTTGGGTAGCAGCGCCCGTACCTCCAGCCCTGCTCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000576147.1 |
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| CDS-3UTR CCA 90 bp | CAGAGCAGGGCTGGAGGTACGGGCGCTGCTACCCAACCCAACAAGCTAGGCCAGCCGCCAGAGCAGGGCTaGAGGTACGGGCGCTGCTAC | + |
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Preference number: 4 (lower is better) Translates to: QSRAGGTGAATQPNKLGQPPEQG*RYGRCY Trigger: GTAGCAGCGCCCGTACCTCCAGCCCTGCTCTGGCGG...CTGGCCTAGCTTGTTGGGTTGGGTAGCAGCGCCCGTACCTCCAGCCCTGCTCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000576147.1 |
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| CDS-3UTR TCA 90 bp | CAGAGCAGGGCTGGAGGTACGGGCGCTGCTACCCAACCCAACAAGCTAGGCCAGCTCCTCCGGACAGCCTaGCAGGACCTGAGAGGCACA | + |
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Preference number: 4 (lower is better) Translates to: QSRAGGTGAATQPNKLGQLLRTA*QDLRGT Trigger: TGTGCCTCTCAGGTCCTGTCAGGCTGTCCGGAGGAG...CTGGCCTAGCTTGTTGGGTTGGGTAGCAGCGCCCGTACCTCCAGCCCTGCTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000576147.1 |
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| CDS-3UTR GCA 90 bp | CCAGAGCAGGGCTGGAGGTACGGGCGCTGCTACCCAACCCAACAAGCTAGGCCAAGCCCTGCTGCGCTCTaGAGAGCCTGGACAACCACC | + |
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Preference number: 4 (lower is better) Translates to: PEQGWRYGRCYPTQQARPSPAAL*RAWTTT Trigger: GGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCT...TGGCCTAGCTTGTTGGGTTGGGTAGCAGCGCCCGTACCTCCAGCCCTGCTCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000576147.1 |
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| CDS-3UTR GCA 90 bp | CCTTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACCGCCAGAAGGGCATGGGGTGGTTaGCGGCAGCAGCAGCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: PLMKSPAALCRAWTTTARRAWGG*RQQQRR Trigger: CCGCCGCTGCTGCTGCCGGCAACCACCCCATGCCCT...TCTGGCGGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339176.8 |
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| CDS-3UTR CCA 90 bp | AGCAGGGCTGGAGGTACGGGCGCTGCTACCCAACCCAACAAGCTAGGCCAGAGGTCCAAGACCTGCAGATaGTCTCCAGCTCGCCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: SRAGGTGAATQPNKLGQRSKTCR*SPARLR Trigger: GCGGAGGCGAGCTGGAGACCATCTGCAGGTCTTGGA...CCTCTGGCCTAGCTTGTTGGGTTGGGTAGCAGCGCCCGTACCTCCAGCCCTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000576147.1 |
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| CDS-3UTR GCA 90 bp | TTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACCGCCAGAGCCCGCGCTCCCGAACATaGACCGGGGCACCGCACAGA | + |
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Preference number: 4 (lower is better) Translates to: FNEKPCCALQSLDNHRQSPRSRT*TGAPHR Trigger: TCTGTGCGGTGCCCCGGTGCATGTTCGGGAGCGCGG...GCTCTGGCGGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR GCA 90 bp | AGCAGGGCTGGAGGTACGGGCGCTGCTACCCAACCCAACAAGCTAGGCCAGAGGTGGAGGTACGGGCGCTaGTACCCAACCCAACAAGCT | + |
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Preference number: 4 (lower is better) Translates to: SRAGGTGAATQPNKLGQRWRYGR*YPTQQA Trigger: AGCTTGTTGGGTTGGGTAGCAGCGCCCGTACCTCCA...CCTCTGGCCTAGCTTGTTGGGTTGGGTAGCAGCGCCCGTACCTCCAGCCCTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000576147.1 |
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| CDS-3UTR CCA 90 bp | AATACCTTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACCGCAGCAGCCGCCAGCAGTaGGGGCGCAGGGGCCATGGG | + |
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Preference number: 4 (lower is better) Translates to: NTFNEKPCCALQSLDNHRSSRQQ*GRRGHG Trigger: CCCATGGCCCCTGCGCCCCCACTGCTGGCGGCTGCT...GCGGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAAGGTATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR GCA 90 bp | ATTGAACCCTTACTATGTGCTGGTCTGGGCTCTGGAGAAGAGCAGGAGGGAGGTAGGGCATGGGGTGGTTaGCGGCAGCAGCAGCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: IEPLLCAGLGSGEEQEGGRAWGG*RQQQRR Trigger: CCGCCGCTGCTGCTGCCGGCAACCACCCCATGCCCT...ACCTCCCTCCTGCTCTTCTCCAGAGCCCAGACCAGCACATAGTAAGGGTTCAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576758.1 |
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| CDS-3UTR GCA 90 bp | ATACCTTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACCGCCCCGCGCTCCCGAACATaGACCGGGGCACCGCACAGA | + |
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Preference number: 4 (lower is better) Translates to: IPLMKSPAALCRAWTTTAPRSRT*TGAPHR Trigger: TCTGTGCGGTGCCCCGGTGCATGTTCGGGAGCGCGG...GGCGGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAAGGTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR CCA 90 bp | CTTACTATGTGCTGGTCTGGGCTCTGGAGAAGAGCAGGAGGGAGGTCCTTAGGTCCTCAGGGCATGGGGTaGTTGCCGGCAGCAGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: LTMCWSGLWRRAGGRSLGPQGMG*LPAAAA Trigger: CGCTGCTGCTGCCGGCAACCACCCCATGCCCTGAGG...ACCTAAGGACCTCCCTCCTGCTCTTCTCCAGAGCCCAGACCAGCACATAGTAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576758.1 |
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| CDS-3UTR CCA 90 bp | ATGTGCTGGTCTGGGCTCTGGAGAAGAGCAGGAGGGAGGTCCTTAGGTGAAGAGAACGGCCTCAGGGCATaGGGTGGTTGCCGGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: MCWSGLWRRAGGRSLGEENGLRA*GGCRQQ Trigger: CTGCTGCCGGCAACCACCCCATGCCCTGAGGCCGTT...CTCTTCACCTAAGGACCTCCCTCCTGCTCTTCTCCAGAGCCCAGACCAGCACAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000576758.1 |
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| CDS-3UTR TCA 90 bp | TTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACCGCCAGAGCATGTCCCCCAAGCGGATaGGACACTCGGCGAAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: LMKSPAALCRAWTTTARACPPSG*DTRRSP Trigger: AGGGCTTCGCCGAGTGTCTCATCCGCTTGGGGGACA...TGCTCTGGCGGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR TCA 90 bp | TTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACCGCCAGAGCACTCCTCCGGACAGCCTaGCAGGACCTGAGAGGCACA | + |
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Preference number: 4 (lower is better) Translates to: LMKSPAALCRAWTTTARALLRTA*QDLRGT Trigger: TGTGCCTCTCAGGTCCTGTCAGGCTGTCCGGAGGAG...TGCTCTGGCGGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR GCA 90 bp | GAGCAGGGCTGGAGGTACGGGCGCTGCTACCCAACCCAACAAGCTAGGCCAGAGAGTCATTCCAAGACCTaGAGATGGTCTCCAGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: EQGWRYGRCYPTQQARPESHSKT*RWSPAR Trigger: GCGAGCTGGAGACCATCTGCAGGTCTTGGAATGACT...CTCTGGCCTAGCTTGTTGGGTTGGGTAGCAGCGCCCGTACCTCCAGCCCTGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000576147.1 |
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| CDS-3UTR GCA 90 bp | CCTTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACCGCCAGAAGCCCTGCTGCGCTCTaGAGAGCCTGGACAACCACC | + |
|
Preference number: 4 (lower is better) Translates to: PLMKSPAALCRAWTTTARSPAAL*RAWTTT Trigger: GGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCT...TCTGGCGGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR CCA 90 bp | TTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACCGCCAGAGCGGTGTCACATCGGTTTaGGCCCGCTGCAGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: FNEKPCCALQSLDNHRQSGVTSV*ARCSCC Trigger: GCAGCAGCTGCAGCGGGCCCAAACCGATGTGACACC...GCTCTGGCGGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR CCA 90 bp | TTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACCGCCAGAGCAGCAGCGTCTCCTGGTTaGTTTCGGAGCCTGTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LMKSPAALCRAWTTTARAAASPG*FRSLCR Trigger: GCGGCACAGGCTCCGAAACCAACCAGGAGACGCTGC...TGCTCTGGCGGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR CCA 90 bp | AATACCTTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACCGCCCGCCAGAGCAGGGCTaGAGGTACGGGCGCTGCTAC | + |
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Preference number: 4 (lower is better) Translates to: NTFNEKPCCALQSLDNHRPPEQG*RYGRCY Trigger: GTAGCAGCGCCCGTACCTCCAGCCCTGCTCTGGCGG...GCGGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAAGGTATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR CCA 90 bp | ATACCTTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACCGCCGCAGCGTCTCCTGGTTaGTTTCGGAGCCTGTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: IPLMKSPAALCRAWTTTAAASPG*FRSLCR Trigger: GCGGCACAGGCTCCGAAACCAACCAGGAGACGCTGC...GGCGGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAAGGTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR TCA 90 bp | ATTGAACCCTTACTATGTGCTGGTCTGGGCTCTGGAGAAGAGCAGGAGGGAGGTTGTCCCCCAAGCGGATaGGACACTCGGCGAAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: IEPLLCAGLGSGEEQEGGCPPSG*DTRRSP Trigger: AGGGCTTCGCCGAGTGTCTCATCCGCTTGGGGGACA...ACCTCCCTCCTGCTCTTCTCCAGAGCCCAGACCAGCACATAGTAAGGGTTCAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000576758.1 |
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| CDS-3UTR TCA 90 bp | ATACCTTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACCGCCCAGCCTGACAGGACCTaGGAGGCACAGGCATGGAAG | + |
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Preference number: 4 (lower is better) Translates to: IPLMKSPAALCRAWTTTAQPDRT*EAQAWK Trigger: CTTCCATGCCTGTGCCTCTCAGGTCCTGTCAGGCTG...GGCGGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAAGGTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR GCA 90 bp | TTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACCGCCAGAGCAGCACCGCACAGAGTGTaGAAGTTATTCGGACGGGGG | + |
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Preference number: 4 (lower is better) Translates to: LMKSPAALCRAWTTTARAAPHRV*KLFGRG Trigger: CCCCCGTCCGAATAACTTGCACACTCTGTGCGGTGC...TGCTCTGGCGGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR GCA 90 bp | TTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACCGCCAGAGCTGGAGGTACGGGCGCTaGTACCCAACCCAACAAGCT | + |
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Preference number: 4 (lower is better) Translates to: FNEKPCCALQSLDNHRQSWRYGR*YPTQQA Trigger: AGCTTGTTGGGTTGGGTAGCAGCGCCCGTACCTCCA...GCTCTGGCGGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR CCA 90 bp | ATACCTTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACCGCCTCCAAGACCTGCAGATaGTCTCCAGCTCGCCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: IPLMKSPAALCRAWTTTASKTCR*SPARLR Trigger: GCGGAGGCGAGCTGGAGACCATCTGCAGGTCTTGGA...GGCGGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAAGGTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR CCA 90 bp | CTTACTATGTGCTGGTCTGGGCTCTGGAGAAGAGCAGGAGGGAGGTCCTTAGGTTGCTGGTCTGGGCTCTaGAGAAGAGCAGGAGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: LTMCWSGLWRRAGGRSLGCWSGL*RRAGGR Trigger: CCTCCCTCCTGCTCTTCTCCAGAGCCCAGACCAGCA...ACCTAAGGACCTCCCTCCTGCTCTTCTCCAGAGCCCAGACCAGCACATAGTAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000576758.1 |
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| CDS-3UTR GCA 90 bp | AATACCTTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACCGCTGGTTTCGGAGCCTGTaGCGCGCTCCCGAACATGCA | + |
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Preference number: 4 (lower is better) Translates to: NTFNEKPCCALQSLDNHRWFRSL*RAPEHA Trigger: TGCATGTTCGGGAGCGCGGCACAGGCTCCGAAACCA...GCGGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAAGGTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR GCA 90 bp | ATTGAACCCTTACTATGTGCTGGTCTGGGCTCTGGAGAAGAGCAGGAGGGAGGTCCTTGTCCACGGTGCTaGAGATGGTCTCCAGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: IEPLLCAGLGSGEEQEGGPCPRC*RWSPAR Trigger: GCGAGCTGGAGACCATCTGCAGCACCGTGGACAAGG...ACCTCCCTCCTGCTCTTCTCCAGAGCCCAGACCAGCACATAGTAAGGGTTCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000576758.1 |
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| CDS-3UTR CCA 90 bp | TTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACCGCCAGAGCACACTCGGCGAAGCCCTaGTATATGGTGTCACATCGG | + |
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Preference number: 4 (lower is better) Translates to: LMKSPAALCRAWTTTARAHSAKP*YMVSHR Trigger: CCGATGTGACACCATATACCAGGGCTTCGCCGAGTG...TGCTCTGGCGGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR CCA 90 bp | CCTTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACCGCCAGAAGGGGCTTGTTTACCTaGGAGCACTCTGGGGATGTG | + |
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Preference number: 4 (lower is better) Translates to: PLMKSPAALCRAWTTTARRGLFT*EHSGDV Trigger: CACATCCCCAGAGTGCTCCCAGGTAAACAAGCCCCT...TCTGGCGGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000576147.1 |
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| CDS-3UTR CCA 90 bp | TTTATTGAACCCTTACTATGTGCTGGTCTGGGCTCTGGAGAAGAGCAGGAGGGACCACGGTGCTGCAGATaGTCTCCAGCTCGCCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: FIEPLLCAGLGSGEEQEGPRCCR*SPARLR Trigger: GCGGAGGCGAGCTGGAGACCATCTGCAGCACCGTGG...TCCCTCCTGCTCTTCTCCAGAGCCCAGACCAGCACATAGTAAGGGTTCAATAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000576758.1 |
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| CDS-3UTR TCA 90 bp | ATACCTTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACCGCCAGCACTCTGGGGATGTaGCTCAGCGGAAAAAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: IPLMKSPAALCRAWTTTASTLGM*LSGKRV Trigger: CACCCTTTTTCCGCTGAGTCACATCCCCAGAGTGCT...GGCGGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAAGGTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000576147.1 |
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| CDS-3UTR GCA 90 bp | TTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACCGCCAGAGCAGCCTGGCGAGCTTCTTaGTGTAGTGATTCCCACACT | + |
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Preference number: 4 (lower is better) Translates to: LMKSPAALCRAWTTTARAAWRAS*CSDSHT Trigger: AGTGTGGGAATCACTACAGCAAGAAGCTCGCCAGGC...TGCTCTGGCGGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR CCA 90 bp | ATAAATACCTTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACAACGGCCTCAGGGCATaGGGTGGTTGCCGGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: INTFNEKPCCALQSLDNHNGLRA*GGCRQQ Trigger: CTGCTGCCGGCAACCACCCCATGCCCTGAGGCCGTT...GTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAAGGTATTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339176.8 |
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| CDS-3UTR CCA 90 bp | TTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACCGCCAGAGCACGAAGCCCTGGTATATaGTGTCACATCGGTTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: LMKSPAALCRAWTTTARARSPGI*CHIGLG Trigger: GCCCAAACCGATGTGACACCATATACCAGGGCTTCG...TGCTCTGGCGGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR CCA 90 bp | ATACCTTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACCGCCCACTCGGCGAAGCCCTaGTATATGGTGTCACATCGG | + |
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Preference number: 4 (lower is better) Translates to: IPLMKSPAALCRAWTTTAHSAKP*YMVSHR Trigger: CCGATGTGACACCATATACCAGGGCTTCGCCGAGTG...GGCGGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAAGGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR CCA 90 bp | CTTACTATGTGCTGGTCTGGGCTCTGGAGAAGAGCAGGAGGGAGGTCCTTAGGTCACTCGGCGAAGCCCTaGTATATGGTGTCACATCGG | + |
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Preference number: 4 (lower is better) Translates to: LTMCWSGLWRRAGGRSLGHSAKP*YMVSHR Trigger: CCGATGTGACACCATATACCAGGGCTTCGCCGAGTG...ACCTAAGGACCTCCCTCCTGCTCTTCTCCAGAGCCCAGACCAGCACATAGTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000576758.1 |
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| CDS-3UTR CCA 90 bp | GAACCCTTACTATGTGCTGGTCTGGGCTCTGGAGAAGAGCAGGAGGGAGGTCCTTACTATGTGCTGGTCTaGGCTCTGGAGAAGAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: EPLLCAGLGSGEEQEGGPYYVLV*ALEKSR Trigger: CCTGCTCTTCTCCAGAGCCCAGACCAGCACATAGTA...AGGACCTCCCTCCTGCTCTTCTCCAGAGCCCAGACCAGCACATAGTAAGGGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000576758.1 |
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| CDS-3UTR CCA 90 bp | ACAAATATAAATACCTTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACCCTCAGGGCATGGGGTaGTTGCCGGCAGCAGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: TNINTFNEKPCCALQSLDPQGMG*LPAAAA Trigger: CGCTGCTGCTGCCGGCAACCACCCCATGCCCTGAGG...GTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAAGGTATTTATATTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339176.8 |
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| CDS-3UTR CCA 90 bp | TTGAACCCTTACTATGTGCTGGTCTGGGCTCTGGAGAAGAGCAGGAGGGAGGTCCGAAGCCCTGGTATATaGTGTCACATCGGTTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: LNPYYVLVWALEKSRREVRSPGI*CHIGLG Trigger: GCCCAAACCGATGTGACACCATATACCAGGGCTTCG...GACCTCCCTCCTGCTCTTCTCCAGAGCCCAGACCAGCACATAGTAAGGGTTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000576758.1 |
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| CDS-3UTR CCA 90 bp | ATAAATACCTTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACGCGCTCTGCAGAGCCTaGACAACCACCGCCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: INTFNEKPCCALQSLDNHALCRA*TTTARA Trigger: TGCTCTGGCGGTGGTTGTCCAGGCTCTGCAGAGCGC...GTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAAGGTATTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR CCA 90 bp | AATACCTTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACCGCTACCTGGGAGCACTCTaGGGATGTGACTCAGCGGAA | + |
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Preference number: 4 (lower is better) Translates to: NTFNEKPCCALQSLDNHRYLGAL*GCDSAE Trigger: TTCCGCTGAGTCACATCCCCAGAGTGCTCCCAGGTA...GCGGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAAGGTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576147.1 |
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| CDS-3UTR CCA 90 bp | ATGTGCTGGTCTGGGCTCTGGAGAAGAGCAGGAGGGAGGTCCTTAGGTGAAGAGACCCTTACTATGTGCTaGTCTGGGCTCTGGAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: MCWSGLWRRAGGRSLGEETLTMC*SGLWRR Trigger: TCTTCTCCAGAGCCCAGACCAGCACATAGTAAGGGT...CTCTTCACCTAAGGACCTCCCTCCTGCTCTTCTCCAGAGCCCAGACCAGCACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000576758.1 |
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| CDS-3UTR TCA 90 bp | ATAAATACCTTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACCAGCCTGACAGGACCTaGGAGGCACAGGCATGGAAG | + |
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Preference number: 4 (lower is better) Translates to: INTFNEKPCCALQSLDNHQPDRT*EAQAWK Trigger: CTTCCATGCCTGTGCCTCTCAGGTCCTGTCAGGCTG...GTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAAGGTATTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR TCA 90 bp | AATATAAATACCTTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACTGTCCCCCAAGCGGATaGGACACTCGGCGAAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: NINTFNEKPCCALQSLDNCPPSG*DTRRSP Trigger: AGGGCTTCGCCGAGTGTCTCATCCGCTTGGGGGACA...GTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAAGGTATTTATATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR GCA 90 bp | ATAAATACCTTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACGCACCGCACAGAGTGTaGAAGTTATTCGGACGGGGG | + |
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Preference number: 4 (lower is better) Translates to: INTFNEKPCCALQSLDNHAPHRV*KLFGRG Trigger: CCCCCGTCCGAATAACTTGCACACTCTGTGCGGTGC...GTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAAGGTATTTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR GCA 90 bp | AATACCTTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACCGCTTTAATGAAAAGCCCTaGTGCGCTCTGCAGAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: NTFNEKPCCALQSLDNHRFNEKP*CALQSL Trigger: CAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAA...GCGGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAAGGTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR CCA 90 bp | AATATAAATACCTTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACGCGCTCTGCAGAGCCTaGACAACCACCGCCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: NINTFNEKPCCALQSLDNALCRA*TTTARA Trigger: TGCTCTGGCGGTGGTTGTCCAGGCTCTGCAGAGCGC...GTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAAGGTATTTATATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR GCA 90 bp | AATATAAATACCTTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACTGGTTTCGGAGCCTGTaGCGCGCTCCCGAACATGCA | + |
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Preference number: 4 (lower is better) Translates to: NINTFNEKPCCALQSLDNWFRSL*RAPEHA Trigger: TGCATGTTCGGGAGCGCGGCACAGGCTCCGAAACCA...GTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAAGGTATTTATATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR GCA 90 bp | ATAAATACCTTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACAGTCATTCCAAGACCTaGAGATGGTCTCCAGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: INTFNEKPCCALQSLDNHSHSKT*RWSPAR Trigger: GCGAGCTGGAGACCATCTGCAGGTCTTGGAATGACT...GTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAAGGTATTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR TCA 90 bp | ATTGAACCCTTACTATGTGCTGGTCTGGGCTCTGGAGAAGAGCAGGAGGGAGGTAGGGAGGTCCTTAGGTaGAGAGATATATTAATGCAG | + |
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Preference number: 4 (lower is better) Translates to: IEPLLCAGLGSGEEQEGGREVLR*RDILMQ Trigger: CTGCATTAATATATCTCTTCACCTAAGGACCTCCCT...ACCTCCCTCCTGCTCTTCTCCAGAGCCCAGACCAGCACATAGTAAGGGTTCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000576758.1 |
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| CDS-3UTR CCA 90 bp | ACAAATATAAATACCTTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACCGAAGCCCTGGTATATaGTGTCACATCGGTTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: TNINTFNEKPCCALQSLDRSPGI*CHIGLG Trigger: GCCCAAACCGATGTGACACCATATACCAGGGCTTCG...GTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAAGGTATTTATATTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR GCA 90 bp | ACAAATATAAATACCTTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACTTTAATGAAAAGCCCTaGTGCGCTCTGCAGAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: TNINTFNEKPCCALQSLDFNEKP*CALQSL Trigger: CAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAA...GTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAAGGTATTTATATTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS CCA 90 bp | GCAGGGGCCATGGGGAGTGCAGGCGCTGTAGCCCGCAGCGTCTCCTaGTTGGTTTCGGAGCCTGTGCCGCGCTCCCGAACATGCACCGGG | + |
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Preference number: 5 (lower is better) Translates to: AGAMGSAGAVARSVS*LVSEPVPRSRTCTG Trigger: CCCGGTGCATGTTCGGGAGCGCGGCACAGGCTCCGAAACCAACCAGGAGACGCTGCGGGCTACAGCGCCTGCACTCCCCATGGCCCCTGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS GCA 90 bp | GAGCCTGGACAACCACCGCCAGAGCAGGGCTGGAGGTACGGGCGCTaGTACCCAACCCAACAAGCTAGGCCAGAGGCCTCAGGAGGTAGG | + |
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Preference number: 5 (lower is better) Translates to: EPGQPPPEQGWRYGR*YPTQQARPEASGGR Trigger: CCTACCTCCTGAGGCCTCTGGCCTAGCTTGTTGGGTTGGGTAGCAGCGCCCGTACCTCCAGCCCTGCTCTGGCGGTGGTTGTCCAGGCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS GCA 90 bp | AGCGTCTCCTGGTTGGTTTCGGAGCCTGTGCCGCGCTCCCGAACATaGACCGGGGCACCGCACAGAGTGTGCAAGTTATTCGGACGGGGG | + |
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Preference number: 5 (lower is better) Translates to: SVSWLVSEPVPRSRT*TGAPHRVCKLFGRG Trigger: CCCCCGTCCGAATAACTTGCACACTCTGTGCGGTGCCCCGGTGCATGTTCGGGAGCGCGGCACAGGCTCCGAAACCAACCAGGAGACGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS CCA 90 bp | CGGCCCATGCTGTCCCCCAAGCGGATGAGACACTCGGCGAAGCCCTaGTATATGGTGTCACATCGGTTTGGGCCCGCTGCAGCTGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: RPMLSPKRMRHSAKP*YMVSHRFGPAAAAA Trigger: GGCAGCAGCTGCAGCGGGCCCAAACCGATGTGACACCATATACCAGGGCTTCGCCGAGTGTCTCATCCGCTTGGGGGACAGCATGGGCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000339176.8 ENST00000576147.1 ENST00000576758.1 |
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| CDS TCA 90 bp | TGGTCTCCAGCTCGCCTCCGCGGCCCATGCTGTCCCCCAAGCGGATaGGACACTCGGCGAAGCCCTGGTATATGGTGTCACATCGGTTTG | + |
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Preference number: 5 (lower is better) Translates to: WSPARLRGPCCPPSG*DTRRSPGIWCHIGL Trigger: CAAACCGATGTGACACCATATACCAGGGCTTCGCCGAGTGTCTCATCCGCTTGGGGGACAGCATGGGCCGCGGAGGCGAGCTGGAGACCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000339176.8 ENST00000576147.1 ENST00000576758.1 |
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| CDS-3UTR CAA 90 bp | TTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACCGCCAGAGCACGCAGCGTCTCCTGGTaGGTTTCGGAGCCTGTGCCG | + |
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Preference number: 5 (lower is better) Translates to: LMKSPAALCRAWTTTARARSVSW*VSEPVP Trigger: CGGCACAGGCTCCGAAACCAACCAGGAGACGCTGCG...TGCTCTGGCGGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR CAA 90 bp | TTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACCGCCAGAGCTGGTGTCACATCGGTTaGGGCCCGCTGCAGCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: FNEKPCCALQSLDNHRQSWCHIG*GPLQLL Trigger: CAGCAGCTGCAGCGGGCCCAAACCGATGTGACACCA...GCTCTGGCGGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR CAA 90 bp | CCTTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACCGCCAGACCAGCCCCCAGGGGCTaGTTTACCTGGGAGCACTCT | + |
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Preference number: 5 (lower is better) Translates to: PLMKSPAALCRAWTTTARPAPRG*FTWEHS Trigger: AGAGTGCTCCCAGGTAAACAAGCCCCTGGGGGCTGG...TCTGGCGGTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000576147.1 |
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| CDS-3UTR CAA 90 bp | CTTACTATGTGCTGGTCTGGGCTCTGGAGAAGAGCAGGAGGGAGGTCCTTAGGTTGGTGTCACATCGGTTaGGGCCCGCTGCAGCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: LTMCWSGLWRRAGGRSLGWCHIG*GPLQLL Trigger: CAGCAGCTGCAGCGGGCCCAAACCGATGTGACACCA...ACCTAAGGACCTCCCTCCTGCTCTTCTCCAGAGCCCAGACCAGCACATAGTAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000576758.1 |
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| CDS-3UTR CAA 90 bp | ATAAATACCTTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACCGCAGCGTCTCCTGGTaGGTTTCGGAGCCTGTGCCG | + |
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Preference number: 5 (lower is better) Translates to: INTFNEKPCCALQSLDNHRSVSW*VSEPVP Trigger: CGGCACAGGCTCCGAAACCAACCAGGAGACGCTGCG...GTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAAGGTATTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR CAA 90 bp | ATAAATACCTTTAATGAAAAGCCCTGCTGCGCTCTGCAGAGCCTGGACAACCACTGGTGTCACATCGGTTaGGGCCCGCTGCAGCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: INTFNEKPCCALQSLDNHWCHIG*GPLQLL Trigger: CAGCAGCTGCAGCGGGCCCAAACCGATGTGACACCA...GTGGTTGTCCAGGCTCTGCAGAGCGCAGCAGGGCTTTTCATTAAAGGTATTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS-3UTR CAA 90 bp | CTTACTATGTGCTGGTCTGGGCTCTGGAGAAGAGCAGGAGGGAGGTCCTTAGGTACAATAAGGTACTCCTaGTCCACGGTGCTGCAGATG | + |
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Preference number: 5 (lower is better) Translates to: LTMCWSGLWRRAGGRSLGTIRYS*STVLQM Trigger: CATCTGCAGCACCGTGGACAAGGAGTACCTTATTGT...ACCTAAGGACCTCCCTCCTGCTCTTCTCCAGAGCCCAGACCAGCACATAGTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000576758.1 |
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| CDS GCA 72 bp | GGCAGCAACAGCAACGGCCTCAGGGCATGGGGTGGTTaGCGGCAGCAGCAGCGGCGGCGGCAGCAGCGCATC | + |
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Preference number: 6 (lower is better) Translates to: GSNSNGLRAWGG*RQQQRRRQQRI Trigger: GATGCGCTGCTGCCGCCGCCGCTGCTGCTGCCGGCAACCACCCCATGCCCTGAGGCCGTTGCTGTTGCTGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339176.8 |
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| CDS CAA 72 bp | GGGAGTGCAGGCGCTGTAGCCCGCAGCGTCTCCTGGTaGGTTTCGGAGCCTGTGCCGCGCTCCCGAACATGC | + |
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Preference number: 6 (lower is better) Translates to: GSAGAVARSVSW*VSEPVPRSRTC Trigger: GCATGTTCGGGAGCGCGGCACAGGCTCCGAAACCAACCAGGAGACGCTGCGGGCTACAGCGCCTGCACTCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS CCA 72 bp | ATGGGGAGTGCAGGCGCTGTAGCCCGCAGCGTCTCCTaGTTGGTTTCGGAGCCTGTGCCGCGCTCCCGAACA | + |
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Preference number: 6 (lower is better) Translates to: MGSAGAVARSVS*LVSEPVPRSRT Trigger: TGTTCGGGAGCGCGGCACAGGCTCCGAAACCAACCAGGAGACGCTGCGGGCTACAGCGCCTGCACTCCCCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS TCA 72 bp | GCTCGCCTCCGCGGCCCATGCTGTCCCCCAAGCGGATaGGACACTCGGCGAAGCCCTGGTATATGGTGTCAC | + |
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Preference number: 6 (lower is better) Translates to: ARLRGPCCPPSG*DTRRSPGIWCH Trigger: GTGACACCATATACCAGGGCTTCGCCGAGTGTCTCATCCGCTTGGGGGACAGCATGGGCCGCGGAGGCGAGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000339176.8 ENST00000576147.1 ENST00000576758.1 |
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| CDS GCA 72 bp | CAACCACCGCCAGAGCAGGGCTGGAGGTACGGGCGCTaGTACCCAACCCAACAAGCTAGGCCAGAGGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: QPPPEQGWRYGR*YPTQQARPEAS Trigger: TGAGGCCTCTGGCCTAGCTTGTTGGGTTGGGTAGCAGCGCCCGTACCTCCAGCCCTGCTCTGGCGGTGGTTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS GCA 72 bp | TGGTTGGTTTCGGAGCCTGTGCCGCGCTCCCGAACATaGACCGGGGCACCGCACAGAGTGTGCAAGTTATTC | + |
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Preference number: 6 (lower is better) Translates to: WLVSEPVPRSRT*TGAPHRVCKLF Trigger: GAATAACTTGCACACTCTGTGCGGTGCCCCGGTGCATGTTCGGGAGCGCGGCACAGGCTCCGAAACCAACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339176.8 ENST00000576147.1 |
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| CDS CCA 72 bp | CTGTCCCCCAAGCGGATGAGACACTCGGCGAAGCCCTaGTATATGGTGTCACATCGGTTTGGGCCCGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: LSPKRMRHSAKP*YMVSHRFGPAA Trigger: TGCAGCGGGCCCAAACCGATGTGACACCATATACCAGGGCTTCGCCGAGTGTCTCATCCGCTTGGGGGACAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000339176.8 ENST00000576147.1 ENST00000576758.1 |
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| CDS CAA 72 bp | CATCCCCCAGGCTCTCTCAGAACAATAAGGTACTCCTaGTCCACGGTGCTGCAGATGGTCTCCAGCTCGCCT | + |
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Preference number: 6 (lower is better) Translates to: HPPGSLRTIRYS*STVLQMVSSSP Trigger: AGGCGAGCTGGAGACCATCTGCAGCACCGTGGACAAGGAGTACCTTATTGTTCTGAGAGAGCCTGGGGGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000576758.1 |
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