RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NRIP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000175352

Ensembl transcript IDs: ENST00000309166.8, ENST00000525100.1, ENST00000531090.5, ENST00000531142.1, ENST00000534759.1

Found 258 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACGCTCGTTTTTAGGCACCAAGATGAGGGCCTAAATGTGACAGTTTaGGGCAAGGAACTTTTACTGGGCTTGGCACACAGGAGGGAGAGC +
Preference number: 1 (lower is better)
Translates to: TLVFRHQDEGLNVTV*GKELLLGLAHRRES
Trigger: GCTCTCCCTCCTGTGTGCCAAGCCCAGTAAAAGTTCCTTGCCCCAAACTGTCACATTTAGGCCCTCATCTTGGTGCCTAAAAACGAGCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000534759.1
3UTR GCA 90 bp AATGAACCCAACACAGCCAGAAACACTGAAAGGATAAAGTGCCAATaGAGAGAGGCCTGGCAACAGGAGGAGGGAGGAATCCAGTTCGTC +
Preference number: 1 (lower is better)
Translates to: NEPNTARNTERIKCQ*REAWQQEEGGIQFV
Trigger: GACGAACTGGATTCCTCCCTCCTCCTGTTGCCAGGCCTCTCTGCATTGGCACTTTATCCTTTCAGTGTTTCTGGCTGTGTTGGGTTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR GCA 90 bp CTCACAAATGAACCCAACACAGCCAGAAACACTGAAAGGATAAAGTaGCAATGCAGAGAGGCCTGGCAACAGGAGGAGGGAGGAATCCAG +
Preference number: 1 (lower is better)
Translates to: LTNEPNTARNTERIK*QCREAWQQEEGGIQ
Trigger: CTGGATTCCTCCCTCCTCCTGTTGCCAGGCCTCTCTGCATTGGCACTTTATCCTTTCAGTGTTTCTGGCTGTGTTGGGTTCATTTGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR CCA 90 bp CTAGAGAGGTCTGAATGGGAAGGAGCCCCTGGAGCTTCTATTAGATaGAAGGACTTGGTCCACAGCAAGTCACTACGGCATTTGGTTCAA +
Preference number: 1 (lower is better)
Translates to: LERSEWEGAPGASIR*KDLVHSKSLRHLVQ
Trigger: TTGAACCAAATGCCGTAGTGACTTGCTGTGGACCAAGTCCTTCCATCTAATAGAAGCTCCAGGGGCTCCTTCCCATTCAGACCTCTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR CCA 90 bp CCTCTTTGCCCTCCTGTTAAAGGCTTGAATACAAATGAGGCAGCATaGGAGTCTTGGCTTGGAAATCAGGTCTGCGTTCTTGGTCCCTTC +
Preference number: 1 (lower is better)
Translates to: PLCPPVKGLNTNEAA*ESWLGNQVCVLGPF
Trigger: GAAGGGACCAAGAACGCAGACCTGATTTCCAAGCCAAGACTCCCATGCTGCCTCATTTGTATTCAAGCCTTTAACAGGAGGGCAAAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000534759.1
3UTR TCA 90 bp CCACCACCCTGCTCGCAGCTGATGACAAATGGATGTGACTTGATCTaGCCCATTTGGGCACTCACTTGTCTTCATTCAAAGAGACTGTCT +
Preference number: 1 (lower is better)
Translates to: PPPCSQLMTNGCDLI*PIWALTCLHSKRLS
Trigger: AGACAGTCTCTTTGAATGAAGACAAGTGAGTGCCCAAATGGGTCAGATCAAGTCACATCCATTTGTCATCAGCTGCGAGCAGGGTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531090.5
3UTR TCA 90 bp CTGAGAACCACCACCACCCTGCTCGCAGCTGATGACAAATGGATGTaGCTTGATCTGACCCATTTGGGCACTCACTTGTCTTCATTCAAA +
Preference number: 1 (lower is better)
Translates to: LRTTTTLLAADDKWM*LDLTHLGTHLSSFK
Trigger: TTTGAATGAAGACAAGTGAGTGCCCAAATGGGTCAGATCAAGTCACATCCATTTGTCATCAGCTGCGAGCAGGGTGGTGGTGGTTCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531090.5
3UTR CCA 90 bp CTGAATGGGAAGGAGCCCCTGGAGCTTCTATTAGATGGAAGGACTTaGTCCACAGCAAGTCACTACGGCATTTGGTTCAAACCCAGTTTT +
Preference number: 1 (lower is better)
Translates to: LNGKEPLELLLDGRT*STASHYGIWFKPSF
Trigger: AAAACTGGGTTTGAACCAAATGCCGTAGTGACTTGCTGTGGACCAAGTCCTTCCATCTAATAGAAGCTCCAGGGGCTCCTTCCCATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR TCA 90 bp TCCTCCACGTCCCCAGCCTGGCAATATATTTCTATTACACAAGAGTaGGGGCAGCTGACATACCAGGCAACCCATTGTATAGACACTTTG +
Preference number: 1 (lower is better)
Translates to: SSTSPAWQYISITQE*GQLTYQATHCIDTL
Trigger: CAAAGTGTCTATACAATGGGTTGCCTGGTATGTCAGCTGCCCTCACTCTTGTGTAATAGAAATATATTGCCAGGCTGGGGACGTGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR CCA 90 bp CTATTAGATGGAAGGACTTGGTCCACAGCAAGTCACTACGGCATTTaGTTCAAACCCAGTTTTCTCTATCTGTCAACCCGGTGTGTATGC +
Preference number: 1 (lower is better)
Translates to: LLDGRTWSTASHYGI*FKPSFLYLSTRCVC
Trigger: GCATACACACCGGGTTGACAGATAGAGAAAACTGGGTTTGAACCAAATGCCGTAGTGACTTGCTGTGGACCAAGTCCTTCCATCTAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR CCA 90 bp CAGACAAGATCTCTAAGCATAGACTATAGTCTAGAGAGGTCTGAATaGGAAGGAGCCCCTGGAGCTTCTATTAGATGGAAGGACTTGGTC +
Preference number: 1 (lower is better)
Translates to: QTRSLSIDYSLERSE*EGAPGASIRWKDLV
Trigger: GACCAAGTCCTTCCATCTAATAGAAGCTCCAGGGGCTCCTTCCCATTCAGACCTCTCTAGACTATAGTCTATGCTTAGAGATCTTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR TCA 90 bp CAAATCATTCAGAGTTCCAAAGGGCTGTTCAGTAGGGGCAGTTGCTaGACACCAGACAAGGTAGTTGGTAGTACTTGGCAAAGTTCAAAG +
Preference number: 1 (lower is better)
Translates to: QIIQSSKGLFSRGSC*TPDKVVGSTWQSSK
Trigger: CTTTGAACTTTGCCAAGTACTACCAACTACCTTGTCTGGTGTTCAGCAACTGCCCCTACTGAACAGCCCTTTGGAACTCTGAATGATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR GCA 90 bp ACAAAAGGGATTTCTTCCTTGTCTGTCTTCCCCATGATCAGCCGGTaGTTATCCAAGTTTATGATGCACTTCAGAGATCGGAGAGTCTGT +
Preference number: 1 (lower is better)
Translates to: TKGISSLSVFPMISR*LSKFMMHFRDRRVC
Trigger: ACAGACTCTCCGATCTCTGAAGTGCATCATAAACTTGGATAAGCACCGGCTGATCATGGGGAAGACAGACAAGGAAGAAATCCCTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531090.5
3UTR GCA 90 bp TGCCTCTTTCCTTGTATCAGGACAGAACTGAACATCTCAATTCCCTaGCTGAAAATGTCATTCCCTGCCTCCCAGAAAGGTTTATCTAGA +
Preference number: 1 (lower is better)
Translates to: CLFPCIRTELNISIP*LKMSFPASQKGLSR
Trigger: TCTAGATAAACCTTTCTGGGAGGCAGGGAATGACATTTTCAGGCAGGGAATTGAGATGTTCAGTTCTGTCCTGATACAAGGAAAGAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR CCA 90 bp AGCCTTCAATTCCATATCAGAGAGGGATTAATATTCCTCTGTCTGTaGTTCCTCCTTTCCTCCAAGAGGTTCACAGTGAGAAACCATTTC +
Preference number: 1 (lower is better)
Translates to: SLQFHIREGLIFLCL*FLLSSKRFTVRNHF
Trigger: GAAATGGTTTCTCACTGTGAACCTCTTGGAGGAAAGGAGGAACCACAGACAGAGGAATATTAATCCCTCTCTGATATGGAATTGAAGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000534759.1
3UTR TCA 90 bp AGCACATATATCTATGGAGACACAGAACCTGGCAGCCCCTATACTTaGCTAATAAAAGCAAATTCCTGGAAGAAGCAGAGAAATAGGCCA +
Preference number: 1 (lower is better)
Translates to: STYIYGDTEPGSPYT*LIKANSWKKQRNRP
Trigger: TGGCCTATTTCTCTGCTTCTTCCAGGAATTTGCTTTTATTAGTCAAGTATAGGGGCTGCCAGGTTCTGTGTCTCCATAGATATATGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR-3UTR GCA 90 bp AGAGGCCTGGCAACAGGAGGAGGGAGGAATCCAGTTCGTCTCCTCCACGTCCCCTCAACCCGGTGTGTATaGATGCACACGTGCAGACAT +
Preference number: 2 (lower is better)
Translates to: RGLATGGGRNPVRLLHVPSTRCV*MHTCRH
Trigger: ATGTCTGCACGTGTGCATGCATACACACCGGGTTGA...GGGGACGTGGAGGAGACGAACTGGATTCCTCCCTCCTCCTGTTGCCAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR-3UTR CCA 90 bp AGAGGCCTGGCAACAGGAGGAGGGAGGAATCCAGTTCGTCTCCTCCACGTCCCCATAGCCTCCCAACCATaGCTGTGCTTAGCTTCCTAT +
Preference number: 2 (lower is better)
Translates to: RGLATGGGRNPVRLLHVPIASQP*LCLASY
Trigger: ATAGGAAGCTAAGCACAGCCATGGTTGGGAGGCTAT...GGGGACGTGGAGGAGACGAACTGGATTCCTCCCTCCTCCTGTTGCCAGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR-3UTR TCA 90 bp AGAGGCCTGGCAACAGGAGGAGGGAGGAATCCAGTTCGTCTCCTCCACGTCCCCGAAATAGGCCACAAGTaGGACTGGCAGTGTCAAAAA +
Preference number: 2 (lower is better)
Translates to: RGLATGGGRNPVRLLHVPEIGHK*DWQCQK
Trigger: TTTTTGACACTGCCAGTCTCACTTGTGGCCTATTTC...GGGGACGTGGAGGAGACGAACTGGATTCCTCCCTCCTCCTGTTGCCAGGCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR-3UTR GCA 90 bp GGGAGCTTCTGTGAGGCCCAAATCATTCAGAGTTCCAAAGGGCTGTTCAGTAGGCCCGGTGTGTATGCATaGACACGTGCAGACATGCTG +
Preference number: 2 (lower is better)
Translates to: GSFCEAQIIQSSKGLFSRPGVYA*TRADML
Trigger: CAGCATGTCTGCACGTGTGCATGCATACACACCGGG...CCTACTGAACAGCCCTTTGGAACTCTGAATGATTTGGGCCTCACAGAAGCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR-3UTR GCA 90 bp CCTACCACTCTGTGTGGCATCACCATTGCTCATTCTGATGTGTGCACTACAGAGGAACCACCACCACCCTaGTCGCAGCTGATGACAAAT +
Preference number: 2 (lower is better)
Translates to: PTTLCGITIAHSDVCTTEEPPPP*SQLMTN
Trigger: ATTTGTCATCAGCTGCGAGCAGGGTGGTGGTGGTTC...CTCTGTAGTGCACACATCAGAATGAGCAATGGTGATGCCACACAGAGTGGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531090.5
ENST00000531142.1
3UTR-3UTR CCA 90 bp CATTTCCCTACCACTCTGTGTGGCATCACCATTGCTCATTCTGATGTGTGCACTTGGGGTGATGAACTCTaGGTGTGGGGAAGGGTGGAT +
Preference number: 2 (lower is better)
Translates to: HFPTTLCGITIAHSDVCTWGDEL*VWGRVD
Trigger: ATCCACCCTTCCCCACACCCAGAGTTCATCACCCCA...AGTGCACACATCAGAATGAGCAATGGTGATGCCACACAGAGTGGTAGGGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531090.5
ENST00000531142.1
3UTR-3UTR GCA 90 bp AGTCATTTCCCTACCACTCTGTGTGGCATCACCATTGCTCATTCTGATGTGTGCGAACCACCACCACCCTaGTCGCAGCTGATGACAAAT +
Preference number: 2 (lower is better)
Translates to: SHFPTTLCGITIAHSDVCEPPPP*SQLMTN
Trigger: ATTTGTCATCAGCTGCGAGCAGGGTGGTGGTGGTTC...GCACACATCAGAATGAGCAATGGTGATGCCACACAGAGTGGTAGGGAAATGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531090.5
ENST00000531142.1
3UTR CAA 90 bp TCTGAATGGGAAGGAGCCCCTGGAGCTTCTATTAGATGGAAGGACTaGGTCCACAGCAAGTCACTACGGCATTTGGTTCAAACCCAGTTT +
Preference number: 2 (lower is better)
Translates to: SEWEGAPGASIRWKD*VHSKSLRHLVQTQF
Trigger: AAACTGGGTTTGAACCAAATGCCGTAGTGACTTGCTGTGGACCAAGTCCTTCCATCTAATAGAAGCTCCAGGGGCTCCTTCCCATTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR-3UTR CCA 90 bp GCTAGCTATTTTTCTGACTTGTCCAAGCACTTCTATGACCAAACTGAAGGGGAGCTAGAGAGGTCTGAATaGGAAGGAGCCCCTGGAGCT +
Preference number: 2 (lower is better)
Translates to: ASYFSDLSKHFYDQTEGELERSE*EGAPGA
Trigger: AGCTCCAGGGGCTCCTTCCCATTCAGACCTCTCTAG...CTCCCCTTCAGTTTGGTCATAGAAGTGCTTGGACAAGTCAGAAAAATAGCTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR-3UTR TCA 90 bp AGGGATTTCTTCCTTGTCTGTCTTCCCCATGATCAGCCGGTGCTTATCCAAGTTCAAATGGATGTGACTTaGTCTGACCCATTTGGGCAC +
Preference number: 2 (lower is better)
Translates to: RDFFLVCLPHDQPVLIQVQMDVT*SDPFGH
Trigger: GTGCCCAAATGGGTCAGATCAAGTCACATCCATTTG...AACTTGGATAAGCACCGGCTGATCATGGGGAAGACAGACAAGGAAGAAATCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531090.5
3UTR-3UTR GCA 90 bp GTTTGGGGCAAGGAACTTTTACTGGGCTTGGCACACAGGAGGGAGAGCTACCCACTTAGACAATTCACTTaGCTCTCTGGACCTTTAAAT +
Preference number: 2 (lower is better)
Translates to: VWGKELLLGLAHRRESYPLRQFT*LSGPLN
Trigger: ATTTAAAGGTCCAGAGAGGCAAGTGAATTGTCTAAG...TGGGTAGCTCTCCCTCCTGTGTGCCAAGCCCAGTAAAAGTTCCTTGCCCCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR CAA 90 bp AGGGGTCAGGAAATACTGGGCAGTTATAAAAAGTTGTCCTTAACATaGCCGGCTCCTGCTCTGCCTCTTTCCTTGTATCAGGACAGAACT +
Preference number: 2 (lower is better)
Translates to: RGQEILGSYKKLSLT*PAPALPLSLYQDRT
Trigger: AGTTCTGTCCTGATACAAGGAAAGAGGCAGAGCAGGAGCCGGCAATGTTAAGGACAACTTTTTATAACTGCCCAGTATTTCCTGACCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR-3UTR TCA 90 bp CCACTCTGTGTGGCATCACCATTGCTCATTCTGATGTGTGCACTACAGAGTTTTCAAATGGATGTGACTTaGTCTGACCCATTTGGGCAC +
Preference number: 2 (lower is better)
Translates to: PLCVASPLLILMCALQSFQMDVT*SDPFGH
Trigger: GTGCCCAAATGGGTCAGATCAAGTCACATCCATTTG...AAAACTCTGTAGTGCACACATCAGAATGAGCAATGGTGATGCCACACAGAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531090.5
ENST00000531142.1
3UTR-3UTR GCA 90 bp TCCTCCAAGAGGTTCACAGTGAGAAACCATTTCATTCATCTTTGTACGCTCGTTGTATGCATGCACACGTaGAGACATGCTGCAGGCTGT +
Preference number: 2 (lower is better)
Translates to: SSKRFTVRNHFIHLCTLVVCMHT*RHAAGC
Trigger: ACAGCCTGCAGCATGTCTGCACGTGTGCATGCATAC...AACGAGCGTACAAAGATGAATGAAATGGTTTCTCACTGTGAACCTCTTGGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR-3UTR GCA 90 bp AACACTGAAAGGATAAAGTGCCAATGCAGAGAGGCCTGGCAACAGGAGGAGGGAAACATCTCAATTCCCTaGCTGAAAATGTCATTCCCT +
Preference number: 2 (lower is better)
Translates to: NTERIKCQCREAWQQEEGNISIP*LKMSFP
Trigger: AGGGAATGACATTTTCAGGCAGGGAATTGAGATGTT...TCCCTCCTCCTGTTGCCAGGCCTCTCTGCATTGGCACTTTATCCTTTCAGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR-3UTR CCA 90 bp CTTTCAAAGCTAGTCATTTCCCTACCACTCTGTGTGGCATCACCATTGCTCATTCCCTACCACTCTGTGTaGCATCACCATTGCTCATTC +
Preference number: 2 (lower is better)
Translates to: LSKLVISLPLCVASPLLIPYHSV*HHHCSF
Trigger: GAATGAGCAATGGTGATGCCACACAGAGTGGTAGGG...AATGAGCAATGGTGATGCCACACAGAGTGGTAGGGAAATGACTAGCTTTGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531090.5
ENST00000531142.1
3UTR CAA 90 bp ATGAGGCAGCATGGGAGTCTTGGCTTGGAAATCAGGTCTGCGTTCTaGGTCCCTTCAGTCACTGACCTAATATATGAACTTAGACAATTC +
Preference number: 2 (lower is better)
Translates to: MRQHGSLGLEIRSAF*VPSVTDLIYELRQF
Trigger: GAATTGTCTAAGTTCATATATTAGGTCAGTGACTGAAGGGACCAAGAACGCAGACCTGATTTCCAAGCCAAGACTCCCATGCTGCCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR-3UTR CCA 90 bp AACACTGAAAGGATAAAGTGCCAATGCAGAGAGGCCTGGCAACAGGAGGAGGGATGGCAAAGTTCAAAGTaGGATCCTTTAAACAAACAC +
Preference number: 2 (lower is better)
Translates to: NTERIKCQCREAWQQEEGWQSSK*DPLNKH
Trigger: GTGTTTGTTTAAAGGATCCCACTTTGAACTTTGCCA...TCCCTCCTCCTGTTGCCAGGCCTCTCTGCATTGGCACTTTATCCTTTCAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR CAA 90 bp AAAAAGTTGTCCTTAACATTGCCGGCTCCTGCTCTGCCTCTTTCCTaGTATCAGGACAGAACTGAACATCTCAATTCCCTGCCTGAAAAT +
Preference number: 2 (lower is better)
Translates to: KKLSLTLPAPALPLS*YQDRTEHLNSLPEN
Trigger: ATTTTCAGGCAGGGAATTGAGATGTTCAGTTCTGTCCTGATACAAGGAAAGAGGCAGAGCAGGAGCCGGCAATGTTAAGGACAACTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR-3UTR TCA 90 bp TATCCTGGCACCTGTTTGAAACAGCTGAAAGGAGGTAAAGGTCAGGTTCCTGTTGGCAGCCCCTATACTTaGCTAATAAAAGCAAATTCC +
Preference number: 2 (lower is better)
Translates to: YPGTCLKQLKGGKGQVPVGSPYT*LIKANS
Trigger: GGAATTTGCTTTTATTAGTCAAGTATAGGGGCTGCC...AACAGGAACCTGACCTTTACCTCCTTTCAGCTGTTTCAAACAGGTGCCAGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR-3UTR GCA 90 bp CTGACTGCAGTATGGCTGCCTAGTTGTTCAAATGATAGTCACCAAGTTCCTAGGGAAAATGTCATTCCCTaGCTCCCAGAAAGGTTTATC +
Preference number: 2 (lower is better)
Translates to: LTAVWLPSCSNDSHQVPRENVIP*LPERFI
Trigger: GATAAACCTTTCTGGGAGGCAGGGAATGACATTTTC...CCTAGGAACTTGGTGACTATCATTTGAACAACTAGGCAGCCATACTGCAGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR-3UTR CCA 90 bp ATTAATATTCCTCTGTCTGTGGTTCCTCCTTTCCTCCAAGAGGTTCACAGTGAGTTAGATGGAAGGACTTaGTCCACAGCAAGTCACTAC +
Preference number: 2 (lower is better)
Translates to: INIPLSVVPPFLQEVHSELDGRT*STASHY
Trigger: GTAGTGACTTGCTGTGGACCAAGTCCTTCCATCTAA...CTCACTGTGAACCTCTTGGAGGAAAGGAGGAACCACAGACAGAGGAATATTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR-3UTR CCA 90 bp GCAGCTGACATACCAGGCAACCCATTGTATAGACACTTTGAGCTAAGAAATAGAGGAGCTTCTATTAGATaGAAGGACTTGGTCCACAGC +
Preference number: 2 (lower is better)
Translates to: AADIPGNPLYRHFELRNRGASIR*KDLVHS
Trigger: GCTGTGGACCAAGTCCTTCCATCTAATAGAAGCTCC...TCTATTTCTTAGCTCAAAGTGTCTATACAATGGGTTGCCTGGTATGTCAGCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR-3UTR CCA 90 bp AAGCTAGTCATTTCCCTACCACTCTGTGTGGCATCACCATTGCTCATTCTGATGGGGTGTGGGGAAGGGTaGATTTGTAGTATAATTGAA +
Preference number: 2 (lower is better)
Translates to: KLVISLPLCVASPLLILMGCGEG*ICSIIE
Trigger: TTCAATTATACTACAAATCCACCCTTCCCCACACCC...CATCAGAATGAGCAATGGTGATGCCACACAGAGTGGTAGGGAAATGACTAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531090.5
ENST00000531142.1
3UTR CAA 90 bp TTGTCTTCATTCAAAGAGACTGTCTCCACAAAAGGGATTTCTTCCTaGTCTGTCTTCCCCATGATCAGCCGGTGCTTATCCAAGTTTATG +
Preference number: 2 (lower is better)
Translates to: LSSFKETVSTKGISS*SVFPMISRCLSKFM
Trigger: CATAAACTTGGATAAGCACCGGCTGATCATGGGGAAGACAGACAAGGAAGAAATCCCTTTTGTGGAGACAGTCTCTTTGAATGAAGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531090.5
3UTR-3UTR TCA 90 bp AACTCTGGGTGTGGGGAAGGGTGGATTTGTAGTATAATTGAAAGCCAAAGACAGGATGACAAATGGATGTaGCTTGATCTGACCCATTTG +
Preference number: 2 (lower is better)
Translates to: NSGCGEGWICSIIESQRQDDKWM*LDLTHL
Trigger: CAAATGGGTCAGATCAAGTCACATCCATTTGTCATC...CTGTCTTTGGCTTTCAATTATACTACAAATCCACCCTTCCCCACACCCAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531090.5
ENST00000531142.1
3UTR-3UTR TCA 90 bp CCATTTGGGCACTCACTTGTCTTCATTCAAAGAGACTGTCTCCACAAAAGGGATGCTTATCCAAGTTTATaGTGCACTTCAGAGATCGGA +
Preference number: 2 (lower is better)
Translates to: PFGHSLVFIQRDCLHKRDAYPSL*CTSEIG
Trigger: TCCGATCTCTGAAGTGCATCATAAACTTGGATAAGC...ATCCCTTTTGTGGAGACAGTCTCTTTGAATGAAGACAAGTGAGTGCCCAAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531090.5
3UTR-3UTR CCA 90 bp CTGACTGCAGTATGGCTGCCTAGTTGTTCAAATGATAGTCACCAAGTTCCTAGGGGGGTCAGGAAATACTaGGCAGTTATAAAAAGTTGT +
Preference number: 2 (lower is better)
Translates to: LTAVWLPSCSNDSHQVPRGVRKY*AVIKSC
Trigger: ACAACTTTTTATAACTGCCCAGTATTTCCTGACCCC...CCTAGGAACTTGGTGACTATCATTTGAACAACTAGGCAGCCATACTGCAGTCAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR CAA 90 bp CCAGGCAACCCATTGTATAGACACTTTGAGCTAAGAAATAGAAAATaGTACCAGGTAGGGTCTGTGCAGGGCAAGAAAATAGAAAGAAGT +
Preference number: 2 (lower is better)
Translates to: PGNPLYRHFELRNRK*YQVGSVQGKKIERS
Trigger: ACTTCTTTCTATTTTCTTGCCCTGCACAGACCCTACCTGGTACAATTTTCTATTTCTTAGCTCAAAGTGTCTATACAATGGGTTGCCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR CAA 90 bp TTCTATTACACAAGAGTGAGGGCAGCTGACATACCAGGCAACCCATaGTATAGACACTTTGAGCTAAGAAATAGAAAATTGTACCAGGTA +
Preference number: 2 (lower is better)
Translates to: FYYTRVRAADIPGNP*YRHFELRNRKLYQV
Trigger: TACCTGGTACAATTTTCTATTTCTTAGCTCAAAGTGTCTATACAATGGGTTGCCTGGTATGTCAGCTGCCCTCACTCTTGTGTAATAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR-3UTR CCA 90 bp TTCACAGTGAGAAACCATTTCATTCATCTTTGTACGCTCGTTTTTAGGCACCAAAGTCACTACGGCATTTaGTTCAAACCCAGTTTTCTC +
Preference number: 2 (lower is better)
Translates to: FTVRNHFIHLCTLVFRHQSHYGI*FKPSFL
Trigger: GAGAAAACTGGGTTTGAACCAAATGCCGTAGTGACT...TTGGTGCCTAAAAACGAGCGTACAAAGATGAATGAAATGGTTTCTCACTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR-3UTR CAA 90 bp GCTTTAGGGAGCTTCTGTGAGGCCCAAATCATTCAGAGTTCCAAAGGGCTGTTCCATGGGAGTCTTGGCTaGGAAATCAGGTCTGCGTTC +
Preference number: 3 (lower is better)
Translates to: ALGSFCEAQIIQSSKGLFHGSLG*EIRSAF
Trigger: GAACGCAGACCTGATTTCCAAGCCAAGACTCCCATG...GAACAGCCCTTTGGAACTCTGAATGATTTGGGCCTCACAGAAGCTCCCTAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR TCA 72 bp ACCACCACCCTGCTCGCAGCTGATGACAAATGGATGTaGCTTGATCTGACCCATTTGGGCACTCACTTGTCT +
Preference number: 3 (lower is better)
Translates to: TTTLLAADDKWM*LDLTHLGTHLS
Trigger: AGACAAGTGAGTGCCCAAATGGGTCAGATCAAGTCACATCCATTTGTCATCAGCTGCGAGCAGGGTGGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531090.5
3UTR CCA 72 bp TCTGAATGGGAAGGAGCCCCTGGAGCTTCTATTAGATaGAAGGACTTGGTCCACAGCAAGTCACTACGGCAT +
Preference number: 3 (lower is better)
Translates to: SEWEGAPGASIR*KDLVHSKSLRH
Trigger: ATGCCGTAGTGACTTGCTGTGGACCAAGTCCTTCCATCTAATAGAAGCTCCAGGGGCTCCTTCCCATTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR TCA 72 bp CAGAGTTCCAAAGGGCTGTTCAGTAGGGGCAGTTGCTaGACACCAGACAAGGTAGTTGGTAGTACTTGGCAA +
Preference number: 3 (lower is better)
Translates to: QSSKGLFSRGSC*TPDKVVGSTWQ
Trigger: TTGCCAAGTACTACCAACTACCTTGTCTGGTGTTCAGCAACTGCCCCTACTGAACAGCCCTTTGGAACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR CCA 72 bp GGAAGGACTTGGTCCACAGCAAGTCACTACGGCATTTaGTTCAAACCCAGTTTTCTCTATCTGTCAACCCGG +
Preference number: 3 (lower is better)
Translates to: GRTWSTASHYGI*FKPSFLYLSTR
Trigger: CCGGGTTGACAGATAGAGAAAACTGGGTTTGAACCAAATGCCGTAGTGACTTGCTGTGGACCAAGTCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR-3UTR CAA 90 bp ATGTCCTGTCTGAGAACCACCACCACCCTGCTCGCAGCTGATGACAAATGGATGCATTTGGGCACTCACTaGTCTTCATTCAAAGAGACT +
Preference number: 3 (lower is better)
Translates to: MSCLRTTTTLLAADDKWMHLGTH*SSFKET
Trigger: AGTCTCTTTGAATGAAGACAAGTGAGTGCCCAAATG...CATCCATTTGTCATCAGCTGCGAGCAGGGTGGTGGTGGTTCTCAGACAGGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531090.5
3UTR CCA 72 bp AAGGAGCCCCTGGAGCTTCTATTAGATGGAAGGACTTaGTCCACAGCAAGTCACTACGGCATTTGGTTCAAA +
Preference number: 3 (lower is better)
Translates to: KEPLELLLDGRT*STASHYGIWFK
Trigger: TTTGAACCAAATGCCGTAGTGACTTGCTGTGGACCAAGTCCTTCCATCTAATAGAAGCTCCAGGGGCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR-3UTR CAA 90 bp GGGAGCTTCTGTGAGGCCCAAATCATTCAGAGTTCCAAAGGGCTGTTCAGTAGGAGCTATTTTTCTGACTaGTCCAAGCACTTCTATGAC +
Preference number: 3 (lower is better)
Translates to: GSFCEAQIIQSSKGLFSRSYFSD*SKHFYD
Trigger: GTCATAGAAGTGCTTGGACAAGTCAGAAAAATAGCT...CCTACTGAACAGCCCTTTGGAACTCTGAATGATTTGGGCCTCACAGAAGCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR TCA 72 bp ATAGTCACCAAGTTCCTAGGCTTTAGGGAGCTTCTGTaGGGCCCAAATCATTCAGAGTTCCAAAGGGCTGTT +
Preference number: 3 (lower is better)
Translates to: IVTKFLGFRELL*GPNHSEFQRAV
Trigger: AACAGCCCTTTGGAACTCTGAATGATTTGGGCCTCACAGAAGCTCCCTAAAGCCTAGGAACTTGGTGACTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR CCA 72 bp CCTCCTGTTAAAGGCTTGAATACAAATGAGGCAGCATaGGAGTCTTGGCTTGGAAATCAGGTCTGCGTTCTT +
Preference number: 3 (lower is better)
Translates to: PPVKGLNTNEAA*ESWLGNQVCVL
Trigger: AAGAACGCAGACCTGATTTCCAAGCCAAGACTCCCATGCTGCCTCATTTGTATTCAAGCCTTTAACAGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000534759.1
3UTR-3UTR CAA 90 bp ATCAGAGAGGGATTAATATTCCTCTGTCTGTGGTTCCTCCTTTCCTCCAAGAGGATTAGATGGAAGGACTaGGTCCACAGCAAGTCACTA +
Preference number: 3 (lower is better)
Translates to: IREGLIFLCLWFLLSSKRIRWKD*VHSKSL
Trigger: TAGTGACTTGCTGTGGACCAAGTCCTTCCATCTAAT...CCTCTTGGAGGAAAGGAGGAACCACAGACAGAGGAATATTAATCCCTCTCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR-3UTR CAA 90 bp GCTAGCTATTTTTCTGACTTGTCCAAGCACTTCTATGACCAAACTGAAGGGGAGGCTCTGCCTCTTTCCTaGTATCAGGACAGAACTGAA +
Preference number: 3 (lower is better)
Translates to: ASYFSDLSKHFYDQTEGEALPLS*YQDRTE
Trigger: TTCAGTTCTGTCCTGATACAAGGAAAGAGGCAGAGC...CTCCCCTTCAGTTTGGTCATAGAAGTGCTTGGACAAGTCAGAAAAATAGCTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR TCA 72 bp TCCCCAGCCTGGCAATATATTTCTATTACACAAGAGTaGGGGCAGCTGACATACCAGGCAACCCATTGTATA +
Preference number: 3 (lower is better)
Translates to: SPAWQYISITQE*GQLTYQATHCI
Trigger: TATACAATGGGTTGCCTGGTATGTCAGCTGCCCTCACTCTTGTGTAATAGAAATATATTGCCAGGCTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR GCA 72 bp ATTTCTTCCTTGTCTGTCTTCCCCATGATCAGCCGGTaGTTATCCAAGTTTATGATGCACTTCAGAGATCGG +
Preference number: 3 (lower is better)
Translates to: ISSLSVFPMISR*LSKFMMHFRDR
Trigger: CCGATCTCTGAAGTGCATCATAAACTTGGATAAGCACCGGCTGATCATGGGGAAGACAGACAAGGAAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531090.5
3UTR CCA 72 bp TCTCTAAGCATAGACTATAGTCTAGAGAGGTCTGAATaGGAAGGAGCCCCTGGAGCTTCTATTAGATGGAAG +
Preference number: 3 (lower is better)
Translates to: SLSIDYSLERSE*EGAPGASIRWK
Trigger: CTTCCATCTAATAGAAGCTCCAGGGGCTCCTTCCCATTCAGACCTCTCTAGACTATAGTCTATGCTTAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR-3UTR CAA 90 bp AGAGCTACCCAAATCATCCTAGCATCCATCTCCAGAGAATATTCCTCCCATGCTAAGTCACTACGGCATTaGGTTCAAACCCAGTTTTCT +
Preference number: 3 (lower is better)
Translates to: RATQIILASISREYSSHAKSLRH*VQTQFS
Trigger: AGAAAACTGGGTTTGAACCAAATGCCGTAGTGACTT...AGCATGGGAGGAATATTCTCTGGAGATGGATGCTAGGATGATTTGGGTAGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR TCA 72 bp CTTTCTCTACTCCTGGTTTCCAGCTACTTCAGTCCTTaGCAGACACATAATAGGATGGGCAGAAATGCTGAT +
Preference number: 3 (lower is better)
Translates to: LSLLLVSSYFSP*QTHNRMGRNAD
Trigger: ATCAGCATTTCTGCCCATCCTATTATGTGTCTGTCAAGGACTGAAGTAGCTGGAAACCAGGAGTAGAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR CCA 72 bp TTCCATATCAGAGAGGGATTAATATTCCTCTGTCTGTaGTTCCTCCTTTCCTCCAAGAGGTTCACAGTGAGA +
Preference number: 3 (lower is better)
Translates to: FHIREGLIFLCL*FLLSSKRFTVR
Trigger: TCTCACTGTGAACCTCTTGGAGGAAAGGAGGAACCACAGACAGAGGAATATTAATCCCTCTCTGATATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000534759.1
3UTR-3UTR CAA 90 bp CTGACTGCAGTATGGCTGCCTAGTTGTTCAAATGATAGTCACCAAGTTCCTAGGTGGCAGCCCCTATACTaGACTAATAAAAGCAAATTC +
Preference number: 3 (lower is better)
Translates to: LTAVWLPSCSNDSHQVPRWQPLY*TNKSKF
Trigger: GAATTTGCTTTTATTAGTCAAGTATAGGGGCTGCCA...CCTAGGAACTTGGTGACTATCATTTGAACAACTAGGCAGCCATACTGCAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR GCA 90 bp AGAGGCCTGGCAACAGGAGGAGGGAGGAATCCAGTTCGTCTCCTCCACGTCCCCTGCTTCATCCGGCGCTaGTGTCGCAGTGACGCCGCC +
Preference number: 4 (lower is better)
Translates to: RGLATGGGRNPVRLLHVPCFIRR*CRSDAA
Trigger: GGCGGCGTCACTGCGACAGCAGCGCCGGATGAAGCA...GGGGACGTGGAGGAGACGAACTGGATTCCTCCCTCCTCCTGTTGCCAGGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR TCA 90 bp TGGGGCAAGGAACTTTTACTGGGCTTGGCACACAGGAGGGAGAGCTACCCAAATGCGCTGCTGTCGCAGTaGCGCCGCCTCCCGCATGTC +
Preference number: 4 (lower is better)
Translates to: WGKELLLGLAHRRESYPNALLSQ*RRLPHV
Trigger: GACATGCGGGAGGCGGCGTCACTGCGACAGCAGCGC...ATTTGGGTAGCTCTCCCTCCTGTGTGCCAAGCCCAGTAAAAGTTCCTTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CCA 90 bp GCCAAAGACAGGATACAACCCCATGTCCTGTCTGAGAACCACCACCACCCTGCTATCAACCACAGCTGCTaGGCAGTCCAGGCGGAGGGA +
Preference number: 4 (lower is better)
Translates to: AKDRIQPHVLSENHHHPAINHSC*AVQAEG
Trigger: TCCCTCCGCCTGGACTGCCCAGCAGCTGTGGTTGAT...AGCAGGGTGGTGGTGGTTCTCAGACAGGACATGGGGTTGTATCCTGTCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531142.1
CDS-3UTR CCA 90 bp AGAGGCCTGGCAACAGGAGGAGGGAGGAATCCAGTTCGTCTCCTCCACGTCCCCGGAATGAGACAGGTCTaGTGCTTCATGCTACTGCCT +
Preference number: 4 (lower is better)
Translates to: RGLATGGGRNPVRLLHVPGMRQV*CFMLLP
Trigger: AGGCAGTAGCATGAAGCACCAGACCTGTCTCATTCC...GGGGACGTGGAGGAGACGAACTGGATTCCTCCCTCCTCCTGTTGCCAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR TCA 90 bp ATTTCCCTACCACTCTGTGTGGCATCACCATTGCTCATTCTGATGTGTGCACTAGCGCTGCTGTCGCAGTaGCGCCGCCTCCCGCATGTC +
Preference number: 4 (lower is better)
Translates to: ISLPLCVASPLLILMCALALLSQ*RRLPHV
Trigger: GACATGCGGGAGGCGGCGTCACTGCGACAGCAGCGC...TAGTGCACACATCAGAATGAGCAATGGTGATGCCACACAGAGTGGTAGGGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531090.5
CDS-3UTR TCA 90 bp TCCCTGCCTCCCAGAAAGGTTTATCTAGATAGGCCTCTCCACCAACTGATTCTAACGAGCCCAGCTTCTTaGGGCCGTCCAGGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SLPPRKVYLDRPLHQLILTSPAS*GRPGAA
Trigger: TGCTGCCCCTGGACGGCCTCAAGAAGCTGGGCTCGT...TAGAATCAGTTGGTGGAGAGGCCTATCTAGATAAACCTTTCTGGGAGGCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR TCA 90 bp GGCATCACCATTGCTCATTCTGATGTGTGCACTACAGAGTTTTGTGGGGTGATGACGAGCCCAGCTTCTTaGGGCCGTCCAGGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GITIAHSDVCTTEFCGVMTSPAS*GRPGAA
Trigger: TGCTGCCCCTGGACGGCCTCAAGAAGCTGGGCTCGT...CATCACCCCACAAAACTCTGTAGTGCACACATCAGAATGAGCAATGGTGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531090.5
CDS-3UTR GCA 90 bp ACAGGATACAACCCCATGTCCTGTCTGAGAACCACCACCACCCTGCTCGCAGCTGAACCACCACCACCCTaGTCGCAGCTGATGACAAAT +
Preference number: 4 (lower is better)
Translates to: TGYNPMSCLRTTTTLLAAEPPPP*SQLMTN
Trigger: ATTTGTCATCAGCTGCGAGCAGGGTGGTGGTGGTTC...AGCTGCGAGCAGGGTGGTGGTGGTTCTCAGACAGGACATGGGGTTGTATCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531090.5
ENST00000531142.1
CDS-3UTR CCA 90 bp AATGAGGCAGCATGGGAGTCTTGGCTTGGAAATCAGGTCTGCGTTCTTGGTCCCCTAGAGAGGTCTGAATaGGAAGGAGCCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: NEAAWESWLGNQVCVLGPLERSE*EGAPGA
Trigger: AGCTCCAGGGGCTCCTTCCCATTCAGACCTCTCTAG...GGGACCAAGAACGCAGACCTGATTTCCAAGCCAAGACTCCCATGCTGCCTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR TCA 90 bp CTCGTTTTTAGGCACCAAGATGAGGGCCTAAATGTGACAGTTTGGGGCAAGGAATGCGGCCGCCCTCAGTaGGGAGCCCTGAGTAAAACA +
Preference number: 4 (lower is better)
Translates to: LVFRHQDEGLNVTVWGKECGRPQ*GALSKT
Trigger: TGTTTTACTCAGGGCTCCTCACTGAGGGCGGCCGCA...TTCCTTGCCCCAAACTGTCACATTTAGGCCCTCATCTTGGTGCCTAAAAACGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR TCA 90 bp AGTCATTTCCCTACCACTCTGTGTGGCATCACCATTGCTCATTCTGATGTGTGCTGCGGCCGCCCTCAGTaGGGAGCCCTGAGTAAAACA +
Preference number: 4 (lower is better)
Translates to: SHFPTTLCGITIAHSDVCCGRPQ*GALSKT
Trigger: TGTTTTACTCAGGGCTCCTCACTGAGGGCGGCCGCA...GCACACATCAGAATGAGCAATGGTGATGCCACACAGAGTGGTAGGGAAATGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531090.5
CDS-3UTR TCA 90 bp TGGGGCAAGGAACTTTTACTGGGCTTGGCACACAGGAGGGAGAGCTACCCAAATCGGGATCACCCCTCATaGGCTTTAGATATAGCCTCC +
Preference number: 4 (lower is better)
Translates to: WGKELLLGLAHRRESYPNRDHPS*ALDIAS
Trigger: GGAGGCTATATCTAAAGCTCATGAGGGGTGATCCCG...ATTTGGGTAGCTCTCCCTCCTGTGTGCCAAGCCCAGTAAAAGTTCCTTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR GCA 90 bp ATTTCTTCCTTGTCTGTCTTCCCCATGATCAGCCGGTGCTTATCCAAGTTTATGTGCTTCATCCGGCGCTaGTGTCGCAGTGACGCCGCC +
Preference number: 4 (lower is better)
Translates to: ISSLSVFPMISRCLSKFMCFIRR*CRSDAA
Trigger: GGCGGCGTCACTGCGACAGCAGCGCCGGATGAAGCA...CATAAACTTGGATAAGCACCGGCTGATCATGGGGAAGACAGACAAGGAAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531090.5
CDS-3UTR CCA 90 bp CATTTCCCTACCACTCTGTGTGGCATCACCATTGCTCATTCTGATGTGTGCACTTCGGCGGAGTCCTTGTaGATGAACTGCACCGCCTGC +
Preference number: 4 (lower is better)
Translates to: HFPTTLCGITIAHSDVCTSAESL*MNCTAC
Trigger: GCAGGCGGTGCAGTTCATCCACAAGGACTCCGCCGA...AGTGCACACATCAGAATGAGCAATGGTGATGCCACACAGAGTGGTAGGGAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531090.5
CDS-3UTR TCA 90 bp TGGGGCAAGGAACTTTTACTGGGCTTGGCACACAGGAGGGAGAGCTACCCAAATCCTGTGTGCCTAATGTaGCACCCCAGTCAAAAAGCT +
Preference number: 4 (lower is better)
Translates to: WGKELLLGLAHRRESYPNPVCLM*HPSQKA
Trigger: AGCTTTTTGACTGGGGTGTCACATTAGGCACACAGG...ATTTGGGTAGCTCTCCCTCCTGTGTGCCAAGCCCAGTAAAAGTTCCTTGCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR GCA 90 bp AGAGAGGGATTAATATTCCTCTGTCTGTGGTTCCTCCTTTCCTCCAAGAGGTTCGTCATCAACCACAGCTaGTGGGCAGTCCAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: REGLIFLCLWFLLSSKRFVINHS*WAVQAE
Trigger: CTCCGCCTGGACTGCCCAGCAGCTGTGGTTGATGAC...GAACCTCTTGGAGGAAAGGAGGAACCACAGACAGAGGAATATTAATCCCTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR GCA 90 bp CTAGTCATTTCCCTACCACTCTGTGTGGCATCACCATTGCTCATTCTGATGTGTGTCATCAACCACAGCTaGTGGGCAGTCCAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: LVISLPLCVASPLLILMCVINHS*WAVQAE
Trigger: CTCCGCCTGGACTGCCCAGCAGCTGTGGTTGATGAC...ACACATCAGAATGAGCAATGGTGATGCCACACAGAGTGGTAGGGAAATGACTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531142.1
CDS-3UTR GCA 90 bp GTTTGGGGCAAGGAACTTTTACTGGGCTTGGCACACAGGAGGGAGAGCTACCCACTTGGAAATCAGGTCTaGGTTCTTGGTCCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: VWGKELLLGLAHRRESYPLGNQV*VLGPFS
Trigger: ACTGAAGGGACCAAGAACGCAGACCTGATTTCCAAG...TGGGTAGCTCTCCCTCCTGTGTGCCAAGCCCAGTAAAAGTTCCTTGCCCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000534759.1
CDS-3UTR CCA 90 bp TACTCCTGGTTTCCAGCTACTTCAGTCCTTGACAGACACATAATAGGATGGGCATCGGCGGAGTCCTTGTaGATGAACTGCACCGCCTGC +
Preference number: 4 (lower is better)
Translates to: YSWFPATSVLDRHIIGWASAESL*MNCTAC
Trigger: GCAGGCGGTGCAGTTCATCCACAAGGACTCCGCCGA...TGCCCATCCTATTATGTGTCTGTCAAGGACTGAAGTAGCTGGAAACCAGGAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CCA 90 bp CCTACCACTCTGTGTGGCATCACCATTGCTCATTCTGATGTGTGCACTACAGAGTGGGGTGATGAACTCTaGGTGTGGGGAAGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: PTTLCGITIAHSDVCTTEWGDEL*VWGRVD
Trigger: ATCCACCCTTCCCCACACCCAGAGTTCATCACCCCA...CTCTGTAGTGCACACATCAGAATGAGCAATGGTGATGCCACACAGAGTGGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531090.5
ENST00000531142.1
CDS-3UTR TCA 90 bp AGAGCTACCCAAATCATCCTAGCATCCATCTCCAGAGAATATTCCTCCCATGCTCGGAGTCCTTGTGGATaGACTGCACCGCCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: RATQIILASISREYSSHARSPCG*TAPPAS
Trigger: TGAAGCAGGCGGTGCAGTTCATCCACAAGGACTCCG...AGCATGGGAGGAATATTCTCTGGAGATGGATGCTAGGATGATTTGGGTAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR TCA 90 bp ATTCCATATCAGAGAGGGATTAATATTCCTCTGTCTGTGGTTCCTCCTTTCCTCAGCACTTTGGGAGGCTaGGGTGGGCGGACCACAAGG +
Preference number: 4 (lower is better)
Translates to: IPYQRGINIPLSVVPPFLSTLGG*GGRTTR
Trigger: CCTTGTGGTCCGCCCACCTCAGCCTCCCAAAGTGCT...GAGGAAAGGAGGAACCACAGACAGAGGAATATTAATCCCTCTCTGATATGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR TCA 90 bp ATGTCCTGTCTGAGAACCACCACCACCCTGCTCGCAGCTGATGACAAATGGATGCAAATGGATGTGACTTaGTCTGACCCATTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: MSCLRTTTTLLAADDKWMQMDVT*SDPFGH
Trigger: GTGCCCAAATGGGTCAGATCAAGTCACATCCATTTG...CATCCATTTGTCATCAGCTGCGAGCAGGGTGGTGGTGGTTCTCAGACAGGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531090.5
ENST00000531142.1
CDS-3UTR GCA 90 bp TTCTCACCTCTTTGCCCTCCTGTTAAAGGCTTGAATACAAATGAGGCAGCATGGATGAACTGCACCGCCTaGTTCATCCGGCGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: FSPLCPPVKGLNTNEAAWMNCTA*FIRRCC
Trigger: ACAGCAGCGCCGGATGAAGCAGGCGGTGCAGTTCAT...CCATGCTGCCTCATTTGTATTCAAGCCTTTAACAGGAGGGCAAAGAGGTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR GCA 90 bp ATTTCCCTACCACTCTGTGTGGCATCACCATTGCTCATTCTGATGTGTGCACTAATGAACTGCACCGCCTaGTTCATCCGGCGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ISLPLCVASPLLILMCALMNCTA*FIRRCC
Trigger: ACAGCAGCGCCGGATGAAGCAGGCGGTGCAGTTCAT...TAGTGCACACATCAGAATGAGCAATGGTGATGCCACACAGAGTGGTAGGGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531090.5
CDS-3UTR GCA 90 bp TCCCTGCCTCCCAGAAAGGTTTATCTAGATAGGCCTCTCCACCAACTGATTCTATGCCGGCTCCTGCTCTaGCTCTTTCCTTGTATCAGG +
Preference number: 4 (lower is better)
Translates to: SLPPRKVYLDRPLHQLILCRLLL*LFPCIR
Trigger: CCTGATACAAGGAAAGAGGCAGAGCAGGAGCCGGCA...TAGAATCAGTTGGTGGAGAGGCCTATCTAGATAAACCTTTCTGGGAGGCAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CCA 90 bp GGCATCACCATTGCTCATTCTGATGTGTGCACTACAGAGTTTTGTGGGGTGATGTGGGGTGATGAACTCTaGGTGTGGGGAAGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: GITIAHSDVCTTEFCGVMWGDEL*VWGRVD
Trigger: ATCCACCCTTCCCCACACCCAGAGTTCATCACCCCA...CATCACCCCACAAAACTCTGTAGTGCACACATCAGAATGAGCAATGGTGATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000531090.5
ENST00000531142.1
CDS-3UTR TCA 90 bp AACACTGAAAGGATAAAGTGCCAATGCAGAGAGGCCTGGCAACAGGAGGAGGGAGTATCAGGACAGAACTaGACATCTCAATTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: NTERIKCQCREAWQQEEGVSGQN*TSQFPA
Trigger: GGCAGGGAATTGAGATGTTCAGTTCTGTCCTGATAC...TCCCTCCTCCTGTTGCCAGGCCTCTCTGCATTGGCACTTTATCCTTTCAGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR GCA 90 bp AATGAGGCAGCATGGGAGTCTTGGCTTGGAAATCAGGTCTGCGTTCTTGGTCCCCCCATGATCAGCCGGTaGTTATCCAAGTTTATGATG +
Preference number: 4 (lower is better)
Translates to: NEAAWESWLGNQVCVLGPPMISR*LSKFMM
Trigger: CATCATAAACTTGGATAAGCACCGGCTGATCATGGG...GGGACCAAGAACGCAGACCTGATTTCCAAGCCAAGACTCCCATGCTGCCTCATT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000534759.1
CDS-3UTR GCA 90 bp AGAGCTACCCAAATCATCCTAGCATCCATCTCCAGAGAATATTCCTCCCATGCTCCCGGTGTGTATGCATaGACACGTGCAGACATGCTG +
Preference number: 4 (lower is better)
Translates to: RATQIILASISREYSSHAPGVYA*TRADML
Trigger: CAGCATGTCTGCACGTGTGCATGCATACACACCGGG...AGCATGGGAGGAATATTCTCTGGAGATGGATGCTAGGATGATTTGGGTAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR GCA 90 bp AACACTGAAAGGATAAAGTGCCAATGCAGAGAGGCCTGGCAACAGGAGGAGGGACTTGGAAATCAGGTCTaGGTTCTTGGTCCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: NTERIKCQCREAWQQEEGLGNQV*VLGPFS
Trigger: ACTGAAGGGACCAAGAACGCAGACCTGATTTCCAAG...TCCCTCCTCCTGTTGCCAGGCCTCTCTGCATTGGCACTTTATCCTTTCAGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR GCA 90 bp TGGGGCAAGGAACTTTTACTGGGCTTGGCACACAGGAGGGAGAGCTACCCAAATACATTCTCACCTCTTTaGCCTCCTGTTAAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: WGKELLLGLAHRRESYPNTFSPL*PPVKGL
Trigger: CAAGCCTTTAACAGGAGGGCAAAGAGGTGAGAATGT...ATTTGGGTAGCTCTCCCTCCTGTGTGCCAAGCCCAGTAAAAGTTCCTTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000534759.1
CDS-3UTR CCA 90 bp TTGTATTCTCCCCAACCTTTGACAGGGGTCAGGAAATACTGGGCAGTTATAAAAATCAACCACAGCTGCTaGGCAGTCCAGGCGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LYSPQPLTGVRKYWAVIKINHSC*AVQAEG
Trigger: TCCCTCCGCCTGGACTGCCCAGCAGCTGTGGTTGAT...TTTTATAACTGCCCAGTATTTCCTGACCCCTGTCAAAGGTTGGGGAGAATACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CCA 90 bp CTCGTTTTTAGGCACCAAGATGAGGGCCTAAATGTGACAGTTTGGGGCAAGGAATCAGGTCTGCGTTCTTaGTCCCTTCAGTCACTGACC +
Preference number: 4 (lower is better)
Translates to: LVFRHQDEGLNVTVWGKESGLRS*SLQSLT
Trigger: GGTCAGTGACTGAAGGGACCAAGAACGCAGACCTGA...TTCCTTGCCCCAAACTGTCACATTTAGGCCCTCATCTTGGTGCCTAAAAACGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000534759.1
CDS-3UTR CCA 90 bp GTTTGGGGCAAGGAACTTTTACTGGGCTTGGCACACAGGAGGGAGAGCTACCCAATCTTTCTCTACTCCTaGTTTCCAGCTACTTCAGTC +
Preference number: 4 (lower is better)
Translates to: VWGKELLLGLAHRRESYPIFLYS*FPATSV
Trigger: GACTGAAGTAGCTGGAAACCAGGAGTAGAGAAAGAT...TGGGTAGCTCTCCCTCCTGTGTGCCAAGCCCAGTAAAAGTTCCTTGCCCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CCA 90 bp GGGAGCTTCTGTGAGGCCCAAATCATTCAGAGTTCCAAAGGGCTGTTCAGTAGGATAGCCTCCCAACCATaGCTGTGCTTAGCTTCCTAT +
Preference number: 4 (lower is better)
Translates to: GSFCEAQIIQSSKGLFSRIASQP*LCLASY
Trigger: ATAGGAAGCTAAGCACAGCCATGGTTGGGAGGCTAT...CCTACTGAACAGCCCTTTGGAACTCTGAATGATTTGGGCCTCACAGAAGCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CCA 90 bp CCTACCACTCTGTGTGGCATCACCATTGCTCATTCTGATGTGTGCACTACAGAGCCCTACCACTCTGTGTaGCATCACCATTGCTCATTC +
Preference number: 4 (lower is better)
Translates to: PTTLCGITIAHSDVCTTEPYHSV*HHHCSF
Trigger: GAATGAGCAATGGTGATGCCACACAGAGTGGTAGGG...CTCTGTAGTGCACACATCAGAATGAGCAATGGTGATGCCACACAGAGTGGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531090.5
ENST00000531142.1
3UTR CAA 72 bp GAAGGAGCCCCTGGAGCTTCTATTAGATGGAAGGACTaGGTCCACAGCAAGTCACTACGGCATTTGGTTCAA +
Preference number: 4 (lower is better)
Translates to: EGAPGASIRWKD*VHSKSLRHLVQ
Trigger: TTGAACCAAATGCCGTAGTGACTTGCTGTGGACCAAGTCCTTCCATCTAATAGAAGCTCCAGGGGCTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR TCA 90 bp TTGAAAGCCAAAGACAGGATACAACCCCATGTCCTGTCTGAGAACCACCACCACCACAGGCCAAAGAGATaGGATTATATAGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LKAKDRIQPHVLSENHHHHRPKR*DYIGSL
Trigger: CAGGCTGCCTATATAATCTCATCTCTTTGGCCTGTG...GTGGTGGTGGTTCTCAGACAGGACATGGGGTTGTATCCTGTCTTTGGCTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531090.5
CDS-3UTR TCA 90 bp CTGACTGCAGTATGGCTGCCTAGTTGTTCAAATGATAGTCACCAAGTTCCTAGGTCTGGCCCACTACTTTaGGATGCCGGGGTAGAGAAA +
Preference number: 4 (lower is better)
Translates to: LTAVWLPSCSNDSHQVPRSGPLL*DAGVEK
Trigger: TTTCTCTACCCCGGCATCTCAAAGTAGTGGGCCAGA...CCTAGGAACTTGGTGACTATCATTTGAACAACTAGGCAGCCATACTGCAGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR TCA 90 bp ATTAATATTCCTCTGTCTGTGGTTCCTCCTTTCCTCCAAGAGGTTCACAGTGAGGGAGGGAGCCCAGTGTaGTCACTAGGTGCTCAATCT +
Preference number: 4 (lower is better)
Translates to: INIPLSVVPPFLQEVHSEGGSPV*SLGAQS
Trigger: AGATTGAGCACCTAGTGATCACACTGGGCTCCCTCC...CTCACTGTGAACCTCTTGGAGGAAAGGAGGAACCACAGACAGAGGAATATTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR TCA 90 bp TGGCACACAGGAGGGAGAGCTACCCAAATCATCCTAGCATCCATCTCCAGAGAAGAAATAGGCCACAAGTaGGACTGGCAGTGTCAAAAA +
Preference number: 4 (lower is better)
Translates to: WHTGGRATQIILASISREEIGHK*DWQCQK
Trigger: TTTTTGACACTGCCAGTCTCACTTGTGGCCTATTTC...TTCTCTGGAGATGGATGCTAGGATGATTTGGGTAGCTCTCCCTCCTGTGTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR TCA 90 bp AATGAGGCAGCATGGGAGTCTTGGCTTGGAAATCAGGTCTGCGTTCTTGGTCCCCTCCTGTTAAAGGCTTaGATACAAATGAGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: NEAAWESWLGNQVCVLGPLLLKA*IQMRQH
Trigger: ATGCTGCCTCATTTGTATTCAAGCCTTTAACAGGAG...GGGACCAAGAACGCAGACCTGATTTCCAAGCCAAGACTCCCATGCTGCCTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000534759.1
CDS-3UTR TCA 90 bp TGGGGCAAGGAACTTTTACTGGGCTTGGCACACAGGAGGGAGAGCTACCCAAATAGCTACTTCAGTCCTTaGCAGACACATAATAGGATG +
Preference number: 4 (lower is better)
Translates to: WGKELLLGLAHRRESYPNSYFSP*QTHNRM
Trigger: CATCCTATTATGTGTCTGTCAAGGACTGAAGTAGCT...ATTTGGGTAGCTCTCCCTCCTGTGTGCCAAGCCCAGTAAAAGTTCCTTGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR TCA 90 bp TATCCTGGCACCTGTTTGAAACAGCTGAAAGGAGGTAAAGGTCAGGTTCCTGTTGGCCTCTCCACCAACTaGTTCTACTCAGTCTACTCC +
Preference number: 4 (lower is better)
Translates to: YPGTCLKQLKGGKGQVPVGLSTN*FYSVYS
Trigger: GGAGTAGACTGAGTAGAATCAGTTGGTGGAGAGGCC...AACAGGAACCTGACCTTTACCTCCTTTCAGCTGTTTCAAACAGGTGCCAGGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR GCA 90 bp AGAGCTACCCAAATCATCCTAGCATCCATCTCCAGAGAATATTCCTCCCATGCTGTATGCATGCACACGTaGAGACATGCTGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: RATQIILASISREYSSHAVCMHT*RHAAGC
Trigger: ACAGCCTGCAGCATGTCTGCACGTGTGCATGCATAC...AGCATGGGAGGAATATTCTCTGGAGATGGATGCTAGGATGATTTGGGTAGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR GCA 90 bp AAGCTAGTCATTTCCCTACCACTCTGTGTGGCATCACCATTGCTCATTCTGATGGAACCACCACCACCCTaGTCGCAGCTGATGACAAAT +
Preference number: 4 (lower is better)
Translates to: KLVISLPLCVASPLLILMEPPPP*SQLMTN
Trigger: ATTTGTCATCAGCTGCGAGCAGGGTGGTGGTGGTTC...CATCAGAATGAGCAATGGTGATGCCACACAGAGTGGTAGGGAAATGACTAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531090.5
ENST00000531142.1
CDS-3UTR CCA 90 bp ATCAGAGAGGGATTAATATTCCTCTGTCTGTGGTTCCTCCTTTCCTCCAAGAGGATGGAGAGGCCTCAGTaGAAAGGTACAAATCCCCGC +
Preference number: 4 (lower is better)
Translates to: IREGLIFLCLWFLLSSKRMERPQ*KGTNPR
Trigger: GCGGGGATTTGTACCTTTCCACTGAGGCCTCTCCAT...CCTCTTGGAGGAAAGGAGGAACCACAGACAGAGGAATATTAATCCCTCTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR CAA 72 bp TGGAAGGACTTGGTCCACAGCAAGTCACTACGGCATTaGGTTCAAACCCAGTTTTCTCTATCTGTCAACCCG +
Preference number: 4 (lower is better)
Translates to: WKDLVHSKSLRH*VQTQFSLSVNP
Trigger: CGGGTTGACAGATAGAGAAAACTGGGTTTGAACCAAATGCCGTAGTGACTTGCTGTGGACCAAGTCCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR TCA 90 bp CCACTCTGTGTGGCATCACCATTGCTCATTCTGATGTGTGCACTACAGAGTTTTACAGGTTGGTTTCCATaGGGCGCCTCTGCAGAATAT +
Preference number: 4 (lower is better)
Translates to: PLCVASPLLILMCALQSFTGWFP*GASAEY
Trigger: ATATTCTGCAGAGGCGCCTCATGGAAACCAACCTGT...AAAACTCTGTAGTGCACACATCAGAATGAGCAATGGTGATGCCACACAGAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531090.5
CDS-3UTR TCA 90 bp AGAGCTACCCAAATCATCCTAGCATCCATCTCCAGAGAATATTCCTCCCATGCTAGTAGGGGCAGTTGCTaGACACCAGACAAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: RATQIILASISREYSSHASRGSC*TPDKVV
Trigger: AACTACCTTGTCTGGTGTTCAGCAACTGCCCCTACT...AGCATGGGAGGAATATTCTCTGGAGATGGATGCTAGGATGATTTGGGTAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR TCA 90 bp TGCCCTCCTGTTAAAGGCTTGAATACAAATGAGGCAGCATGGGAGTCTTGGCTTGCCAAAGTATTGCCATaGAAGGTAGGGAAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: CPPVKGLNTNEAAWESWLAKVLP*KVGKEH
Trigger: ATGCTCCTTCCCTACCTTTCATGGCAATACTTTGGC...AAGCCAAGACTCCCATGCTGCCTCATTTGTATTCAAGCCTTTAACAGGAGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR TCA 90 bp AGTCATTTCCCTACCACTCTGTGTGGCATCACCATTGCTCATTCTGATGTGTGCCAAATGGATGTGACTTaGTCTGACCCATTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SHFPTTLCGITIAHSDVCQMDVT*SDPFGH
Trigger: GTGCCCAAATGGGTCAGATCAAGTCACATCCATTTG...GCACACATCAGAATGAGCAATGGTGATGCCACACAGAGTGGTAGGGAAATGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531090.5
ENST00000531142.1
CDS-3UTR GCA 90 bp TTGTATTCTCCCCAACCTTTGACAGGGGTCAGGAAATACTGGGCAGTTATAAAATCCTTGTGGATGAACTaGACCGCCTGCTTCATCCGG +
Preference number: 4 (lower is better)
Translates to: LYSPQPLTGVRKYWAVIKSLWMN*TACFIR
Trigger: CCGGATGAAGCAGGCGGTGCAGTTCATCCACAAGGA...TTTTATAACTGCCCAGTATTTCCTGACCCCTGTCAAAGGTTGGGGAGAATACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR GCA 90 bp TATCCTGGCACCTGTTTGAAACAGCTGAAAGGAGGTAAAGGTCAGGTTCCTGTTTCAACCCGGTGTGTATaGATGCACACGTGCAGACAT +
Preference number: 4 (lower is better)
Translates to: YPGTCLKQLKGGKGQVPVSTRCV*MHTCRH
Trigger: ATGTCTGCACGTGTGCATGCATACACACCGGGTTGA...AACAGGAACCTGACCTTTACCTCCTTTCAGCTGTTTCAAACAGGTGCCAGGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CCA 90 bp TACTCCTGGTTTCCAGCTACTTCAGTCCTTGACAGACACATAATAGGATGGGCAAACTTTTACTGGGCTTaGCACACAGGAGGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: YSWFPATSVLDRHIIGWANFYWA*HTGGRA
Trigger: AGCTCTCCCTCCTGTGTGCCAAGCCCAGTAAAAGTT...TGCCCATCCTATTATGTGTCTGTCAAGGACTGAAGTAGCTGGAAACCAGGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CCA 90 bp ATTAATATTCCTCTGTCTGTGGTTCCTCCTTTCCTCCAAGAGGTTCACAGTGAGGCAAGGAACTTTTACTaGGCTTGGCACACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: INIPLSVVPPFLQEVHSEARNFY*AWHTGG
Trigger: CCCTCCTGTGTGCCAAGCCCAGTAAAAGTTCCTTGC...CTCACTGTGAACCTCTTGGAGGAAAGGAGGAACCACAGACAGAGGAATATTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000534759.1
CDS-3UTR CCA 90 bp GTTTGGGGCAAGGAACTTTTACTGGGCTTGGCACACAGGAGGGAGAGCTACCCATGGCAAAGTTCAAAGTaGGATCCTTTAAACAAACAC +
Preference number: 4 (lower is better)
Translates to: VWGKELLLGLAHRRESYPWQSSK*DPLNKH
Trigger: GTGTTTGTTTAAAGGATCCCACTTTGAACTTTGCCA...TGGGTAGCTCTCCCTCCTGTGTGCCAAGCCCAGTAAAAGTTCCTTGCCCCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CCA 90 bp TGTGGGGTGATGAACTCTGGGTGTGGGGAAGGGTGGATTTGTAGTATAATTGAACCCTACCACTCTGTGTaGCATCACCATTGCTCATTC +
Preference number: 4 (lower is better)
Translates to: CGVMNSGCGEGWICSIIEPYHSV*HHHCSF
Trigger: GAATGAGCAATGGTGATGCCACACAGAGTGGTAGGG...TTCAATTATACTACAAATCCACCCTTCCCCACACCCAGAGTTCATCACCCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531090.5
ENST00000531142.1
CDS-3UTR TCA 90 bp GCTAGCTATTTTTCTGACTTGTCCAAGCACTTCTATGACCAAACTGAAGGGGAGACAGGTTGGTTTCCATaGGGCGCCTCTGCAGAATAT +
Preference number: 4 (lower is better)
Translates to: ASYFSDLSKHFYDQTEGETGWFP*GASAEY
Trigger: ATATTCTGCAGAGGCGCCTCATGGAAACCAACCTGT...CTCCCCTTCAGTTTGGTCATAGAAGTGCTTGGACAAGTCAGAAAAATAGCTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR TCA 90 bp AGAGCTACCCAAATCATCCTAGCATCCATCTCCAGAGAATATTCCTCCCATGCTCACAGGCCAAAGAGATaGGATTATATAGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: RATQIILASISREYSSHAHRPKR*DYIGSL
Trigger: CAGGCTGCCTATATAATCTCATCTCTTTGGCCTGTG...AGCATGGGAGGAATATTCTCTGGAGATGGATGCTAGGATGATTTGGGTAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR TCA 90 bp GCTTTAGGGAGCTTCTGTGAGGCCCAAATCATTCAGAGTTCCAAAGGGCTGTTCGCTTATCCAAGTTTATaGTGCACTTCAGAGATCGGA +
Preference number: 4 (lower is better)
Translates to: ALGSFCEAQIIQSSKGLFAYPSL*CTSEIG
Trigger: TCCGATCTCTGAAGTGCATCATAAACTTGGATAAGC...GAACAGCCCTTTGGAACTCTGAATGATTTGGGCCTCACAGAAGCTCCCTAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR TCA 90 bp AGAGAGGGATTAATATTCCTCTGTCTGTGGTTCCTCCTTTCCTCCAAGAGGTTCAGGCTTGAATACAAATaGGGCAGCATGGGAGTCTTG +
Preference number: 4 (lower is better)
Translates to: REGLIFLCLWFLLSSKRFRLEYK*GSMGVL
Trigger: CAAGACTCCCATGCTGCCTCATTTGTATTCAAGCCT...GAACCTCTTGGAGGAAAGGAGGAACCACAGACAGAGGAATATTAATCCCTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000534759.1
CDS-3UTR TCA 90 bp TTCTCACCTCTTTGCCCTCCTGTTAAAGGCTTGAATACAAATGAGGCAGCATGGGATGGGCAGAAATGCTaGTCGGATCTTGGGAGTAAT +
Preference number: 4 (lower is better)
Translates to: FSPLCPPVKGLNTNEAAWDGQKC*SDLGSN
Trigger: ATTACTCCCAAGATCCGATCAGCATTTCTGCCCATC...CCATGCTGCCTCATTTGTATTCAAGCCTTTAACAGGAGGGCAAAGAGGTGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR TCA 90 bp ATCAGAGAGGGATTAATATTCCTCTGTCTGTGGTTCCTCCTTTCCTCCAAGAGGTTTAGGGAGCTTCTGTaGGGCCCAAATCATTCAGAG +
Preference number: 4 (lower is better)
Translates to: IREGLIFLCLWFLLSSKRFRELL*GPNHSE
Trigger: CTCTGAATGATTTGGGCCTCACAGAAGCTCCCTAAA...CCTCTTGGAGGAAAGGAGGAACCACAGACAGAGGAATATTAATCCCTCTCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR TCA 90 bp CTGACTGCAGTATGGCTGCCTAGTTGTTCAAATGATAGTCACCAAGTTCCTAGGACTCCTGGGAAAAACTaGCCTCACCTTCTTACCTTC +
Preference number: 4 (lower is better)
Translates to: LTAVWLPSCSNDSHQVPRTPGKN*PHLLTF
Trigger: GAAGGTAAGAAGGTGAGGTCAGTTTTTCCCAGGAGT...CCTAGGAACTTGGTGACTATCATTTGAACAACTAGGCAGCCATACTGCAGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR TCA 90 bp GCAGCTGACATACCAGGCAACCCATTGTATAGACACTTTGAGCTAAGAAATAGAAAGAGTGAGGGCAGCTaGCATACCAGGCAACCCATT +
Preference number: 4 (lower is better)
Translates to: AADIPGNPLYRHFELRNRKSEGS*HTRQPI
Trigger: AATGGGTTGCCTGGTATGTCAGCTGCCCTCACTCTT...TCTATTTCTTAGCTCAAAGTGTCTATACAATGGGTTGCCTGGTATGTCAGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR GCA 90 bp CATATCAGAGAGGGATTAATATTCCTCTGTCTGTGGTTCCTCCTTTCCTCCAAGAACATTGCCGGCTCCTaGTCTGCCTCTTTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: HIREGLIFLCLWFLLSSKNIAGS*SASFLV
Trigger: TACAAGGAAAGAGGCAGAGCAGGAGCCGGCAATGTT...CTTGGAGGAAAGGAGGAACCACAGACAGAGGAATATTAATCCCTCTCTGATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR GCA 90 bp AGAGCTACCCAAATCATCCTAGCATCCATCTCCAGAGAATATTCCTCCCATGCTACTGAAAGGATAAAGTaGCAATGCAGAGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RATQIILASISREYSSHATERIK*QCREAW
Trigger: CCAGGCCTCTCTGCATTGGCACTTTATCCTTTCAGT...AGCATGGGAGGAATATTCTCTGGAGATGGATGCTAGGATGATTTGGGTAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CCA 90 bp TCCTCCAAGAGGTTCACAGTGAGAAACCATTTCATTCATCTTTGTACGCTCGTTTCAGGTCTGCGTTCTTaGTCCCTTCAGTCACTGACC +
Preference number: 4 (lower is better)
Translates to: SSKRFTVRNHFIHLCTLVSGLRS*SLQSLT
Trigger: GGTCAGTGACTGAAGGGACCAAGAACGCAGACCTGA...AACGAGCGTACAAAGATGAATGAAATGGTTTCTCACTGTGAACCTCTTGGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000534759.1
CDS-3UTR CCA 90 bp TCCTCCAAGAGGTTCACAGTGAGAAACCATTTCATTCATCTTTGTACGCTCGTTGCAAGGAACTTTTACTaGGCTTGGCACACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: SSKRFTVRNHFIHLCTLVARNFY*AWHTGG
Trigger: CCCTCCTGTGTGCCAAGCCCAGTAAAAGTTCCTTGC...AACGAGCGTACAAAGATGAATGAAATGGTTTCTCACTGTGAACCTCTTGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000534759.1
CDS-3UTR CCA 90 bp CCTGTTAAAGGCTTGAATACAAATGAGGCAGCATGGGAGTCTTGGCTTGGAAATCAACATGCCTCACTGTaGCTAAGAGTCAAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PVKGLNTNEAAWESWLGNQHASL*LRVKAQ
Trigger: CTGAGCCTTGACTCTTAGCCACAGTGAGGCATGTTG...ATTTCCAAGCCAAGACTCCCATGCTGCCTCATTTGTATTCAAGCCTTTAACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CCA 90 bp ATTTCCCTACCACTCTGTGTGGCATCACCATTGCTCATTCTGATGTGTGCACTACACTACAGAGTTTTGTaGGGTGATGAACTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: ISLPLCVASPLLILMCALHYRVL*GDELWV
Trigger: CACCCAGAGTTCATCACCCCACAAAACTCTGTAGTG...TAGTGCACACATCAGAATGAGCAATGGTGATGCCACACAGAGTGGTAGGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531090.5
ENST00000531142.1
CDS-3UTR TCA 90 bp ATCAGAGAGGGATTAATATTCCTCTGTCTGTGGTTCCTCCTTTCCTCCAAGAGGCTCTGCAGAATATTATaGGGTTGCATGTCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: IREGLIFLCLWFLLSSKRLCRIL*GCMSLD
Trigger: GTCCAAGGACATGCAACCTCATAATATTCTGCAGAG...CCTCTTGGAGGAAAGGAGGAACCACAGACAGAGGAATATTAATCCCTCTCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR TCA 90 bp TTCCTTGTCTGTCTTCCCCATGATCAGCCGGTGCTTATCCAAGTTTATGATGCACTCTGCAGAATATTATaGGGTTGCATGTCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: FLVCLPHDQPVLIQVYDALCRIL*GCMSLD
Trigger: GTCCAAGGACATGCAACCTCATAATATTCTGCAGAG...TGCATCATAAACTTGGATAAGCACCGGCTGATCATGGGGAAGACAGACAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531090.5
CDS-3UTR TCA 90 bp GGCATCACCATTGCTCATTCTGATGTGTGCACTACAGAGTTTTGTGGGGTGATGGCTTATCCAAGTTTATaGTGCACTTCAGAGATCGGA +
Preference number: 4 (lower is better)
Translates to: GITIAHSDVCTTEFCGVMAYPSL*CTSEIG
Trigger: TCCGATCTCTGAAGTGCATCATAAACTTGGATAAGC...CATCACCCCACAAAACTCTGTAGTGCACACATCAGAATGAGCAATGGTGATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531090.5
ENST00000531142.1
CDS-3UTR TCA 90 bp AATATTCCTCTGTCTGTGGTTCCTCCTTTCCTCCAAGAGGTTCACAGTGAGAAAAGGCTTGAATACAAATaGGGCAGCATGGGAGTCTTG +
Preference number: 4 (lower is better)
Translates to: NIPLSVVPPFLQEVHSEKRLEYK*GSMGVL
Trigger: CAAGACTCCCATGCTGCCTCATTTGTATTCAAGCCT...TTTCTCACTGTGAACCTCTTGGAGGAAAGGAGGAACCACAGACAGAGGAATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000534759.1
CDS-3UTR TCA 90 bp TCCCTGCCTCCCAGAAAGGTTTATCTAGATAGGCCTCTCCACCAACTGATTCTACTCCTGTTAAAGGCTTaGATACAAATGAGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: SLPPRKVYLDRPLHQLILLLLKA*IQMRQH
Trigger: ATGCTGCCTCATTTGTATTCAAGCCTTTAACAGGAG...TAGAATCAGTTGGTGGAGAGGCCTATCTAGATAAACCTTTCTGGGAGGCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR TCA 90 bp TCACCTCTTTGCCCTCCTGTTAAAGGCTTGAATACAAATGAGGCAGCATGGGAGACATCTAATAAGGAATaGGACAGGTCTGGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: SPLCPPVKGLNTNEAAWETSNKE*DRSGAS
Trigger: TGAAGCACCAGACCTGTCTCATTCCTTATTAGATGT...CTCCCATGCTGCCTCATTTGTATTCAAGCCTTTAACAGGAGGGCAAAGAGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR TCA 90 bp AATATTCCTCTGTCTGTGGTTCCTCCTTTCCTCCAAGAGGTTCACAGTGAGAAATCTATTACACAAGAGTaGGGGCAGCTGACATACCAG +
Preference number: 4 (lower is better)
Translates to: NIPLSVVPPFLQEVHSEKSITQE*GQLTYQ
Trigger: CTGGTATGTCAGCTGCCCTCACTCTTGTGTAATAGA...TTTCTCACTGTGAACCTCTTGGAGGAAAGGAGGAACCACAGACAGAGGAATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR TCA 90 bp AGTCATTTCCCTACCACTCTGTGTGGCATCACCATTGCTCATTCTGATGTGTGCGATGACAAATGGATGTaGCTTGATCTGACCCATTTG +
Preference number: 4 (lower is better)
Translates to: SHFPTTLCGITIAHSDVCDDKWM*LDLTHL
Trigger: CAAATGGGTCAGATCAAGTCACATCCATTTGTCATC...GCACACATCAGAATGAGCAATGGTGATGCCACACAGAGTGGTAGGGAAATGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531090.5
ENST00000531142.1
CDS-3UTR GCA 90 bp AGAGAGGGATTAATATTCCTCTGTCTGTGGTTCCTCCTTTCCTCCAAGAGGTTCCCCATGATCAGCCGGTaGTTATCCAAGTTTATGATG +
Preference number: 4 (lower is better)
Translates to: REGLIFLCLWFLLSSKRFPMISR*LSKFMM
Trigger: CATCATAAACTTGGATAAGCACCGGCTGATCATGGG...GAACCTCTTGGAGGAAAGGAGGAACCACAGACAGAGGAATATTAATCCCTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000534759.1
CDS-3UTR GCA 90 bp TACTCCTGGTTTCCAGCTACTTCAGTCCTTGACAGACACATAATAGGATGGGCAACATTCTCACCTCTTTaGCCTCCTGTTAAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: YSWFPATSVLDRHIIGWATFSPL*PPVKGL
Trigger: CAAGCCTTTAACAGGAGGGCAAAGAGGTGAGAATGT...TGCCCATCCTATTATGTGTCTGTCAAGGACTGAAGTAGCTGGAAACCAGGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR GCA 90 bp GCTTTAGGGAGCTTCTGTGAGGCCCAAATCATTCAGAGTTCCAAAGGGCTGTTCAACATCTCAATTCCCTaGCTGAAAATGTCATTCCCT +
Preference number: 4 (lower is better)
Translates to: ALGSFCEAQIIQSSKGLFNISIP*LKMSFP
Trigger: AGGGAATGACATTTTCAGGCAGGGAATTGAGATGTT...GAACAGCCCTTTGGAACTCTGAATGATTTGGGCCTCACAGAAGCTCCCTAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR GCA 90 bp TTGTATTCTCCCCAACCTTTGACAGGGGTCAGGAAATACTGGGCAGTTATAAAACCCAGTGCTCCCTCATaGACATCAAGGAGATATGAG +
Preference number: 4 (lower is better)
Translates to: LYSPQPLTGVRKYWAVIKPSAPS*TSRRYE
Trigger: CTCATATCTCCTTGATGTGCATGAGGGAGCACTGGG...TTTTATAACTGCCCAGTATTTCCTGACCCCTGTCAAAGGTTGGGGAGAATACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR GCA 90 bp TCCTCCAAGAGGTTCACAGTGAGAAACCATTTCATTCATCTTTGTACGCTCGTTAGGATAAAGTGCCAATaGAGAGAGGCCTGGCAACAG +
Preference number: 4 (lower is better)
Translates to: SSKRFTVRNHFIHLCTLVRIKCQ*REAWQQ
Trigger: CTGTTGCCAGGCCTCTCTGCATTGGCACTTTATCCT...AACGAGCGTACAAAGATGAATGAAATGGTTTCTCACTGTGAACCTCTTGGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CCA 90 bp ATTAATATTCCTCTGTCTGTGGTTCCTCCTTTCCTCCAAGAGGTTCACAGTGAGACTAGGTGCTCAATCTaGCCCACTACTTTGAGATGC +
Preference number: 4 (lower is better)
Translates to: INIPLSVVPPFLQEVHSETRCSI*PTTLRC
Trigger: GCATCTCAAAGTAGTGGGCCAGATTGAGCACCTAGT...CTCACTGTGAACCTCTTGGAGGAAAGGAGGAACCACAGACAGAGGAATATTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CCA 90 bp TCCTCCAAGAGGTTCACAGTGAGAAACCATTTCATTCATCTTTGTACGCTCGTTAACTTTTACTGGGCTTaGCACACAGGAGGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: SSKRFTVRNHFIHLCTLVNFYWA*HTGGRA
Trigger: AGCTCTCCCTCCTGTGTGCCAAGCCCAGTAAAAGTT...AACGAGCGTACAAAGATGAATGAAATGGTTTCTCACTGTGAACCTCTTGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000534759.1
CDS-3UTR CCA 90 bp TCCCTGCCTCCCAGAAAGGTTTATCTAGATAGGCCTCTCCACCAACTGATTCTATCCACGTCCCCAGCCTaGCAATATATTTCTATTACA +
Preference number: 4 (lower is better)
Translates to: SLPPRKVYLDRPLHQLILSTSPA*QYISIT
Trigger: TGTAATAGAAATATATTGCCAGGCTGGGGACGTGGA...TAGAATCAGTTGGTGGAGAGGCCTATCTAGATAAACCTTTCTGGGAGGCAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CCA 90 bp TCTGGGTGTGGGGAAGGGTGGATTTGTAGTATAATTGAAAGCCAAAGACAGGATCACTACAGAGTTTTGTaGGGTGATGAACTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SGCGEGWICSIIESQRQDHYRVL*GDELWV
Trigger: CACCCAGAGTTCATCACCCCACAAAACTCTGTAGTG...ATCCTGTCTTTGGCTTTCAATTATACTACAAATCCACCCTTCCCCACACCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531090.5
ENST00000531142.1
3UTR CAA 72 bp CATGGGAGTCTTGGCTTGGAAATCAGGTCTGCGTTCTaGGTCCCTTCAGTCACTGACCTAATATATGAACTT +
Preference number: 4 (lower is better)
Translates to: HGSLGLEIRSAF*VPSVTDLIYEL
Trigger: AAGTTCATATATTAGGTCAGTGACTGAAGGGACCAAGAACGCAGACCTGATTTCCAAGCCAAGACTCCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
3UTR CAA 72 bp CTAGTCATTTCCCTACCACTCTGTGTGGCATCACCATaGCTCATTCTGATGTGTGCACTACAGAGTTTTGTG +
Preference number: 4 (lower is better)
Translates to: LVISLPLCVASP*LILMCALQSFV
Trigger: CACAAAACTCTGTAGTGCACACATCAGAATGAGCAATGGTGATGCCACACAGAGTGGTAGGGAAATGACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531090.5
ENST00000531142.1
CDS-3UTR TCA 90 bp ATTTCTTCCTTGTCTGTCTTCCCCATGATCAGCCGGTGCTTATCCAAGTTTATGCCCTCAGACTTAGCCTaGTTGAGTTTGTTCGTCTTA +
Preference number: 4 (lower is better)
Translates to: ISSLSVFPMISRCLSKFMPSDLA*LSLFVL
Trigger: TAAGACGAACAAACTCAATCAGGCTAAGTCTGAGGG...CATAAACTTGGATAAGCACCGGCTGATCATGGGGAAGACAGACAAGGAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531090.5
CDS-3UTR TCA 90 bp TTCCTTGTCTGTCTTCCCCATGATCAGCCGGTGCTTATCCAAGTTTATGATGCAGCTTATCCAAGTTTATaGTGCACTTCAGAGATCGGA +
Preference number: 4 (lower is better)
Translates to: FLVCLPHDQPVLIQVYDAAYPSL*CTSEIG
Trigger: TCCGATCTCTGAAGTGCATCATAAACTTGGATAAGC...TGCATCATAAACTTGGATAAGCACCGGCTGATCATGGGGAAGACAGACAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531090.5
CDS-3UTR TCA 90 bp ATCAGAGAGGGATTAATATTCCTCTGTCTGTGGTTCCTCCTTTCCTCCAAGAGGGGCAGCCCCTATACTTaGCTAATAAAAGCAAATTCC +
Preference number: 4 (lower is better)
Translates to: IREGLIFLCLWFLLSSKRGSPYT*LIKANS
Trigger: GGAATTTGCTTTTATTAGTCAAGTATAGGGGCTGCC...CCTCTTGGAGGAAAGGAGGAACCACAGACAGAGGAATATTAATCCCTCTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR TCA 90 bp AGAGCTACCCAAATCATCCTAGCATCCATCTCCAGAGAATATTCCTCCCATGCTCCAAGAGGTTCACAGTaGGAAACCATTTCATTCATC +
Preference number: 4 (lower is better)
Translates to: RATQIILASISREYSSHAPRGSQ*ETISFI
Trigger: GATGAATGAAATGGTTTCTCACTGTGAACCTCTTGG...AGCATGGGAGGAATATTCTCTGGAGATGGATGCTAGGATGATTTGGGTAGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000534759.1
CDS-3UTR TCA 90 bp ACTACGGCATTTGGTTCAAACCCAGTTTTCTCTATCTGTCAACCCGGTGTGTATCACAGCCAGAAACACTaGAAGGATAAAGTGCCAATG +
Preference number: 4 (lower is better)
Translates to: TTAFGSNPVFSICQPGVYHSQKH*KDKVPM
Trigger: CATTGGCACTTTATCCTTTCAGTGTTTCTGGCTGTG...ATACACACCGGGTTGACAGATAGAGAAAACTGGGTTTGAACCAAATGCCGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR GCA 90 bp TTGTATTCTCCCCAACCTTTGACAGGGGTCAGGAAATACTGGGCAGTTATAAAAAGTGTGATCACTAGGTaGTCAATCTGGCCCACTACT +
Preference number: 4 (lower is better)
Translates to: LYSPQPLTGVRKYWAVIKSVITR*SIWPTT
Trigger: AGTAGTGGGCCAGATTGAGCACCTAGTGATCACACT...TTTTATAACTGCCCAGTATTTCCTGACCCCTGTCAAAGGTTGGGGAGAATACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR GCA 90 bp TCTGGGTGTGGGGAAGGGTGGATTTGTAGTATAATTGAAAGCCAAAGACAGGATCCCATGATCAGCCGGTaGTTATCCAAGTTTATGATG +
Preference number: 4 (lower is better)
Translates to: SGCGEGWICSIIESQRQDPMISR*LSKFMM
Trigger: CATCATAAACTTGGATAAGCACCGGCTGATCATGGG...ATCCTGTCTTTGGCTTTCAATTATACTACAAATCCACCCTTCCCCACACCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531090.5
ENST00000531142.1
CDS-3UTR GCA 90 bp ATCAGAGAGGGATTAATATTCCTCTGTCTGTGGTTCCTCCTTTCCTCCAAGAGGAGGTCTGGTGCTTCATaGTACTGCCTATTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: IREGLIFLCLWFLLSSKRRSGAS*YCLFSE
Trigger: TTCTGAAAATAGGCAGTAGCATGAAGCACCAGACCT...CCTCTTGGAGGAAAGGAGGAACCACAGACAGAGGAATATTAATCCCTCTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR GCA 90 bp ATTAATATTCCTCTGTCTGTGGTTCCTCCTTTCCTCCAAGAGGTTCACAGTGAGATGAGACAGGTCTGGTaGTTCATGCTACTGCCTATT +
Preference number: 4 (lower is better)
Translates to: INIPLSVVPPFLQEVHSEMRQVW*FMLLPI
Trigger: AATAGGCAGTAGCATGAAGCACCAGACCTGTCTCAT...CTCACTGTGAACCTCTTGGAGGAAAGGAGGAACCACAGACAGAGGAATATTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CCA 90 bp AATATTCCTCTGTCTGTGGTTCCTCCTTTCCTCCAAGAGGTTCACAGTGAGAAATCTCCTTCATGCTTGTaGGATTTGACATGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: NIPLSVVPPFLQEVHSEKSPSCL*DLTCSL
Trigger: CAAGGAGCATGTCAAATCCCACAAGCATGAAGGAGA...TTTCTCACTGTGAACCTCTTGGAGGAAAGGAGGAACCACAGACAGAGGAATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CCA 90 bp GCTAGCTATTTTTCTGACTTGTCCAAGCACTTCTATGACCAAACTGAAGGGGAGTTAGATGGAAGGACTTaGTCCACAGCAAGTCACTAC +
Preference number: 4 (lower is better)
Translates to: ASYFSDLSKHFYDQTEGELDGRT*STASHY
Trigger: GTAGTGACTTGCTGTGGACCAAGTCCTTCCATCTAA...CTCCCCTTCAGTTTGGTCATAGAAGTGCTTGGACAAGTCAGAAAAATAGCTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CCA 90 bp ATTCCATATCAGAGAGGGATTAATATTCCTCTGTCTGTGGTTCCTCCTTTCCTCGGAGCTTCTATTAGATaGAAGGACTTGGTCCACAGC +
Preference number: 4 (lower is better)
Translates to: IPYQRGINIPLSVVPPFLGASIR*KDLVHS
Trigger: GCTGTGGACCAAGTCCTTCCATCTAATAGAAGCTCC...GAGGAAAGGAGGAACCACAGACAGAGGAATATTAATCCCTCTCTGATATGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CCA 90 bp TGCCCTCCTGTTAAAGGCTTGAATACAAATGAGGCAGCATGGGAGTCTTGGCTTCTAAATGTGACAGTTTaGGGCAAGGAACTTTTACTG +
Preference number: 4 (lower is better)
Translates to: CPPVKGLNTNEAAWESWLLNVTV*GKELLL
Trigger: CAGTAAAAGTTCCTTGCCCCAAACTGTCACATTTAG...AAGCCAAGACTCCCATGCTGCCTCATTTGTATTCAAGCCTTTAACAGGAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000534759.1
CDS-3UTR CCA 90 bp TTCTCACCTCTTTGCCCTCCTGTTAAAGGCTTGAATACAAATGAGGCAGCATGGAGACACATAATAGGATaGGCAGAAATGCTGATCGGA +
Preference number: 4 (lower is better)
Translates to: FSPLCPPVKGLNTNEAAWRHIIG*AEMLIG
Trigger: TCCGATCAGCATTTCTGCCCATCCTATTATGTGTCT...CCATGCTGCCTCATTTGTATTCAAGCCTTTAACAGGAGGGCAAAGAGGTGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CCA 90 bp TCCCTGCCTCCCAGAAAGGTTTATCTAGATAGGCCTCTCCACCAACTGATTCTAGGGGTCAGGAAATACTaGGCAGTTATAAAAAGTTGT +
Preference number: 4 (lower is better)
Translates to: SLPPRKVYLDRPLHQLILGVRKY*AVIKSC
Trigger: ACAACTTTTTATAACTGCCCAGTATTTCCTGACCCC...TAGAATCAGTTGGTGGAGAGGCCTATCTAGATAAACCTTTCTGGGAGGCAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CCA 90 bp CTAGTCATTTCCCTACCACTCTGTGTGGCATCACCATTGCTCATTCTGATGTGTGGGTGTGGGGAAGGGTaGATTTGTAGTATAATTGAA +
Preference number: 4 (lower is better)
Translates to: LVISLPLCVASPLLILMCGCGEG*ICSIIE
Trigger: TTCAATTATACTACAAATCCACCCTTCCCCACACCC...ACACATCAGAATGAGCAATGGTGATGCCACACAGAGTGGTAGGGAAATGACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531090.5
ENST00000531142.1
CDS-3UTR CCA 90 bp TGTGGGGTGATGAACTCTGGGTGTGGGGAAGGGTGGATTTGTAGTATAATTGAAGGGTGTGGGGAAGGGTaGATTTGTAGTATAATTGAA +
Preference number: 4 (lower is better)
Translates to: CGVMNSGCGEGWICSIIEGCGEG*ICSIIE
Trigger: TTCAATTATACTACAAATCCACCCTTCCCCACACCC...TTCAATTATACTACAAATCCACCCTTCCCCACACCCAGAGTTCATCACCCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531090.5
ENST00000531142.1
3UTR CAA 72 bp CTTAAAGGGATACCCACAGCTAGCTATTTTTCTGACTaGTCCAAGCACTTCTATGACCAAACTGAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: LKGIPTASYFSD*SKHFYDQTEGE
Trigger: CTCCCCTTCAGTTTGGTCATAGAAGTGCTTGGACAAGTCAGAAAAATAGCTAGCTGTGGGTATCCCTTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR TCA 90 bp TCCTCCAAGAGGTTCACAGTGAGAAACCATTTCATTCATCTTTGTACGCTCGTTCCCTCAGACTTAGCCTaGTTGAGTTTGTTCGTCTTA +
Preference number: 4 (lower is better)
Translates to: SSKRFTVRNHFIHLCTLVPSDLA*LSLFVL
Trigger: TAAGACGAACAAACTCAATCAGGCTAAGTCTGAGGG...AACGAGCGTACAAAGATGAATGAAATGGTTTCTCACTGTGAACCTCTTGGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR TCA 90 bp CCTGTTAAAGGCTTGAATACAAATGAGGCAGCATGGGAGTCTTGGCTTGGAAATGCTTATCCAAGTTTATaGTGCACTTCAGAGATCGGA +
Preference number: 4 (lower is better)
Translates to: PVKGLNTNEAAWESWLGNAYPSL*CTSEIG
Trigger: TCCGATCTCTGAAGTGCATCATAAACTTGGATAAGC...ATTTCCAAGCCAAGACTCCCATGCTGCCTCATTTGTATTCAAGCCTTTAACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000534759.1
CDS-3UTR TCA 90 bp CCATTTGGGCACTCACTTGTCTTCATTCAAAGAGACTGTCTCCACAAAAGGGATGATGACAAATGGATGTaGCTTGATCTGACCCATTTG +
Preference number: 4 (lower is better)
Translates to: PFGHSLVFIQRDCLHKRDDDKWM*LDLTHL
Trigger: CAAATGGGTCAGATCAAGTCACATCCATTTGTCATC...ATCCCTTTTGTGGAGACAGTCTCTTTGAATGAAGACAAGTGAGTGCCCAAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531090.5
CDS-3UTR GCA 90 bp GCAGCTGACATACCAGGCAACCCATTGTATAGACACTTTGAGCTAAGAAATAGATTGTGGGATTTGACATaGTCCTTGAGTCCCAATCTG +
Preference number: 4 (lower is better)
Translates to: AADIPGNPLYRHFELRNRLWDLT*SLSPNL
Trigger: CAGATTGGGACTCAAGGAGCATGTCAAATCCCACAA...TCTATTTCTTAGCTCAAAGTGTCTATACAATGGGTTGCCTGGTATGTCAGCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR GCA 90 bp CATTTGGGCACTCACTTGTCTTCATTCAAAGAGACTGTCTCCACAAAAGGGATTCCCATGATCAGCCGGTaGTTATCCAAGTTTATGATG +
Preference number: 4 (lower is better)
Translates to: HLGTHLSSFKETVSTKGIPMISR*LSKFMM
Trigger: CATCATAAACTTGGATAAGCACCGGCTGATCATGGG...AATCCCTTTTGTGGAGACAGTCTCTTTGAATGAAGACAAGTGAGTGCCCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531090.5
CDS-3UTR GCA 90 bp TGCCCTCCTGTTAAAGGCTTGAATACAAATGAGGCAGCATGGGAGTCTTGGCTTCTTAGACAATTCACTTaGCTCTCTGGACCTTTAAAT +
Preference number: 4 (lower is better)
Translates to: CPPVKGLNTNEAAWESWLLRQFT*LSGPLN
Trigger: ATTTAAAGGTCCAGAGAGGCAAGTGAATTGTCTAAG...AAGCCAAGACTCCCATGCTGCCTCATTTGTATTCAAGCCTTTAACAGGAGGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR GCA 90 bp CCTGTTAAAGGCTTGAATACAAATGAGGCAGCATGGGAGTCTTGGCTTGGAAATCTTAGACAATTCACTTaGCTCTCTGGACTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: PVKGLNTNEAAWESWLGNLRQFT*LSGLVF
Trigger: GAAGACAAGTCCAGAGAGGCAAGTGAATTGTCTAAG...ATTTCCAAGCCAAGACTCCCATGCTGCCTCATTTGTATTCAAGCCTTTAACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534759.1
CDS-3UTR CCA 90 bp GCTAGCTATTTTTCTGACTTGTCCAAGCACTTCTATGACCAAACTGAAGGGGAGTCCTTTCCAGCACACTaGCAAGAAACCAAAATCATG +
Preference number: 4 (lower is better)
Translates to: ASYFSDLSKHFYDQTEGESFPAH*QETKIM
Trigger: CATGATTTTGGTTTCTTGCCAGTGTGCTGGAAAGGA...CTCCCCTTCAGTTTGGTCATAGAAGTGCTTGGACAAGTCAGAAAAATAGCTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CCA 90 bp TCTGGGTGTGGGGAAGGGTGGATTTGTAGTATAATTGAAAGCCAAAGACAGGATTCCTTTCCAGCACACTaGCAAGAAACCAAAATCATG +
Preference number: 4 (lower is better)
Translates to: SGCGEGWICSIIESQRQDSFPAH*QETKIM
Trigger: CATGATTTTGGTTTCTTGCCAGTGTGCTGGAAAGGA...ATCCTGTCTTTGGCTTTCAATTATACTACAAATCCACCCTTCCCCACACCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531090.5
CDS-3UTR CCA 90 bp AGAGAGGGATTAATATTCCTCTGTCTGTGGTTCCTCCTTTCCTCCAAGAGGTTCGTAGTTGGTAGTACTTaGCAAAGTTCAAAGTGGGAT +
Preference number: 4 (lower is better)
Translates to: REGLIFLCLWFLLSSKRFVVGST*QSSKWD
Trigger: ATCCCACTTTGAACTTTGCCAAGTACTACCAACTAC...GAACCTCTTGGAGGAAAGGAGGAACCACAGACAGAGGAATATTAATCCCTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CCA 90 bp TTCTCACCTCTTTGCCCTCCTGTTAAAGGCTTGAATACAAATGAGGCAGCATGGATTCACTTGCCTCTCTaGACTTGTCTTCATTCAAAG +
Preference number: 4 (lower is better)
Translates to: FSPLCPPVKGLNTNEAAWIHLPL*TCLHSK
Trigger: CTTTGAATGAAGACAAGTCCAGAGAGGCAAGTGAAT...CCATGCTGCCTCATTTGTATTCAAGCCTTTAACAGGAGGGCAAAGAGGTGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534759.1
CDS-3UTR TCA 90 bp TTCACAGTGAGAAACCATTTCATTCATCTTTGTACGCTCGTTTTTAGGCACCAAATTCTCCCCAACCTTTaGCAGGGGTCAGGAAATACT +
Preference number: 4 (lower is better)
Translates to: FTVRNHFIHLCTLVFRHQILPNL*QGSGNT
Trigger: AGTATTTCCTGACCCCTGTCAAAGGTTGGGGAGAAT...TTGGTGCCTAAAAACGAGCGTACAAAGATGAATGAAATGGTTTCTCACTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR GCA 90 bp CCTTCAATTCCATATCAGAGAGGGATTAATATTCCTCTGTCTGTGGTTCCTCCTAGCTTTTCTCCTTCATaGTTGTGGGATTTGACATGC +
Preference number: 4 (lower is better)
Translates to: PSIPYQRGINIPLSVVPPSFSPS*LWDLTC
Trigger: GCATGTCAAATCCCACAAGCATGAAGGAGAAAAGCT...AGGAGGAACCACAGACAGAGGAATATTAATCCCTCTCTGATATGGAATTGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR GCA 90 bp CCTTCAATTCCATATCAGAGAGGGATTAATATTCCTCTGTCTGTGGTTCCTCCTGAAAATGTCATTCCCTaGCTCCCAGAAAGGTTTATC +
Preference number: 4 (lower is better)
Translates to: PSIPYQRGINIPLSVVPPENVIP*LPERFI
Trigger: GATAAACCTTTCTGGGAGGCAGGGAATGACATTTTC...AGGAGGAACCACAGACAGAGGAATATTAATCCCTCTCTGATATGGAATTGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CCA 90 bp TTGTATTCTCCCCAACCTTTGACAGGGGTCAGGAAATACTGGGCAGTTATAAAAAGTCACTACGGCATTTaGTTCAAACCCAGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: LYSPQPLTGVRKYWAVIKSHYGI*FKPSFL
Trigger: GAGAAAACTGGGTTTGAACCAAATGCCGTAGTGACT...TTTTATAACTGCCCAGTATTTCCTGACCCCTGTCAAAGGTTGGGGAGAATACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CCA 90 bp CAATTCCATATCAGAGAGGGATTAATATTCCTCTGTCTGTGGTTCCTCCTTTCCCTAAATGTGACAGTTTaGGGCAAGGAACTTTTACTG +
Preference number: 4 (lower is better)
Translates to: QFHIREGLIFLCLWFLLSLNVTV*GKELLL
Trigger: CAGTAAAAGTTCCTTGCCCCAAACTGTCACATTTAG...GGAAAGGAGGAACCACAGACAGAGGAATATTAATCCCTCTCTGATATGGAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000534759.1
CDS-3UTR TCA 90 bp TTCACAGTGAGAAACCATTTCATTCATCTTTGTACGCTCGTTTTTAGGCACCAACCAAGAGGTTCACAGTaGGAAACCATTTCATTCATC +
Preference number: 4 (lower is better)
Translates to: FTVRNHFIHLCTLVFRHQPRGSQ*ETISFI
Trigger: GATGAATGAAATGGTTTCTCACTGTGAACCTCTTGG...TTGGTGCCTAAAAACGAGCGTACAAAGATGAATGAAATGGTTTCTCACTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000534759.1
CDS-3UTR TCA 90 bp TCTGCGTTCTTGGTCCCTTCAGTCACTGACCTAATATATGAACTTAGACAATTCCACATCAAGGAGATATaGGCTAGGAGAATAATCAAC +
Preference number: 4 (lower is better)
Translates to: SAFLVPSVTDLIYELRQFHIKEI*ARRIIN
Trigger: GTTGATTATTCTCCTAGCTCATATCTCCTTGATGTG...GAATTGTCTAAGTTCATATATTAGGTCAGTGACTGAAGGGACCAAGAACGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS TCA 90 bp GTGACGCCGCCTCCCGCATGTCGGTCTCCTTGCGGCCGCCCTCAGTaGGGAGCCCTGAGTAAAACATCGCTGAGGCGCCGGCGGCCCGGT +
Preference number: 5 (lower is better)
Translates to: VTPPPACRSPCGRPQ*GALSKTSLRRRRPG
Trigger: ACCGGGCCGCCGGCGCCTCAGCGATGTTTTACTCAGGGCTCCTCACTGAGGGCGGCCGCAAGGAGACCGACATGCGGGAGGCGGCGTCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309166.8
ENST00000525100.1
ENST00000531090.5
CDS TCA 90 bp GTGGATGAACTGCACCGCCTGCTTCATCCGGCGCTGCTGTCGCAGTaGCGCCGCCTCCCGCATGTCGGTCTCCTTGCGGCCGCCCTCAGT +
Preference number: 5 (lower is better)
Translates to: VDELHRLLHPALLSQ*RRLPHVGLLAAALS
Trigger: ACTGAGGGCGGCCGCAAGGAGACCGACATGCGGGAGGCGGCGTCACTGCGACAGCAGCGCCGGATGAAGCAGGCGGTGCAGTTCATCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309166.8
ENST00000525100.1
ENST00000531090.5
CDS GCA 90 bp GCTGCTGGGCAGTCCAGGCGGAGGGAGCCCAGTGTGATCACTAGGTaGTCAATCTGGCCCACTACTTTGAGATGCCGGGGTAGAGAAAGC +
Preference number: 5 (lower is better)
Translates to: AAGQSRRREPSVITR*SIWPTTLRCRGRES
Trigger: GCTTTCTCTACCCCGGCATCTCAAAGTAGTGGGCCAGATTGAGCACCTAGTGATCACACTGGGCTCCCTCCGCCTGGACTGCCCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CAA 90 bp GTCTGTCTTCCCCATGATCAGCCGGTGCTTATCCAAGTTTATGATGCACTTCAGCGCATGTCGGTCTCCTaGCGGCCGCCCTCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: VCLPHDQPVLIQVYDALQRMSVS*RPPSVR
Trigger: CCTCACTGAGGGCGGCCGCAAGGAGACCGACATGCG...CTGAAGTGCATCATAAACTTGGATAAGCACCGGCTGATCATGGGGAAGACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531090.5
CDS CCA 90 bp CAGTCCAGGCGGAGGGAGCCCAGTGTGATCACTAGGTGCTCAATCTaGCCCACTACTTTGAGATGCCGGGGTAGAGAAAGCTTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: QSRRREPSVITRCSI*PTTLRCRGRESFSP
Trigger: AGGAGAAAAGCTTTCTCTACCCCGGCATCTCAAAGTAGTGGGCCAGATTGAGCACCTAGTGATCACACTGGGCTCCCTCCGCCTGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CAA 90 bp AATGAGGCAGCATGGGAGTCTTGGCTTGGAAATCAGGTCTGCGTTCTTGGTCCCCGGAGCTTAGACAGGTaGGTTTCCATGAGGCGCCTC +
Preference number: 5 (lower is better)
Translates to: NEAAWESWLGNQVCVLGPRSLDR*VSMRRL
Trigger: GAGGCGCCTCATGGAAACCAACCTGTCTAAGCTCCG...GGGACCAAGAACGCAGACCTGATTTCCAAGCCAAGACTCCCATGCTGCCTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CAA 90 bp CCTGTTAAAGGCTTGAATACAAATGAGGCAGCATGGGAGTCTTGGCTTGGAAATCGCATGTCGGTCTCCTaGCGGCCGCCCTCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: PVKGLNTNEAAWESWLGNRMSVS*RPPSVR
Trigger: CCTCACTGAGGGCGGCCGCAAGGAGACCGACATGCG...ATTTCCAAGCCAAGACTCCCATGCTGCCTCATTTGTATTCAAGCCTTTAACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CAA 90 bp CTCGTTTTTAGGCACCAAGATGAGGGCCTAAATGTGACAGTTTGGGGCAAGGAAAGGTCGGCGGAGTCCTaGTGGATGAACTGCACCGCC +
Preference number: 5 (lower is better)
Translates to: LVFRHQDEGLNVTVWGKERSAES*WMNCTA
Trigger: GGCGGTGCAGTTCATCCACAAGGACTCCGCCGACCT...TTCCTTGCCCCAAACTGTCACATTTAGGCCCTCATCTTGGTGCCTAAAAACGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CAA 90 bp CCTGTTAAAGGCTTGAATACAAATGAGGCAGCATGGGAGTCTTGGCTTGGAAATGACGAGCCCAGCTTCTaGAGGCCGTCCAGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: PVKGLNTNEAAWESWLGNDEPSF*RPSRGS
Trigger: GCTGCCCCTGGACGGCCTCAAGAAGCTGGGCTCGTC...ATTTCCAAGCCAAGACTCCCATGCTGCCTCATTTGTATTCAAGCCTTTAACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CAA 90 bp AGAGGCCTGGCAACAGGAGGAGGGAGGAATCCAGTTCGTCTCCTCCACGTCCCCGGCAGTTATAAAAAGTaGTCCTTAACATTGCCGGCT +
Preference number: 5 (lower is better)
Translates to: RGLATGGGRNPVRLLHVPGSYKK*SLTLPA
Trigger: AGCCGGCAATGTTAAGGACAACTTTTTATAACTGCC...GGGGACGTGGAGGAGACGAACTGGATTCCTCCCTCCTCCTGTTGCCAGGCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CAA 90 bp GACAGGATACAACCCCATGTCCTGTCTGAGAACCACCACCACCCTGCTCGCAGCCTTGATCTGACCCATTaGGGCACTCACTTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: DRIQPHVLSENHHHPARSLDLTH*GTHLSS
Trigger: TGAAGACAAGTGAGTGCCCAAATGGGTCAGATCAAG...GCTGCGAGCAGGGTGGTGGTGGTTCTCAGACAGGACATGGGGTTGTATCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531090.5
ENST00000531142.1
CDS-3UTR CAA 90 bp CCACTCTGTGTGGCATCACCATTGCTCATTCTGATGTGTGCACTACAGAGTTTTAGGTCGGCGGAGTCCTaGTGGATGAACTGCACCGCC +
Preference number: 5 (lower is better)
Translates to: PLCVASPLLILMCALQSFRSAES*WMNCTA
Trigger: GGCGGTGCAGTTCATCCACAAGGACTCCGCCGACCT...AAAACTCTGTAGTGCACACATCAGAATGAGCAATGGTGATGCCACACAGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531090.5
CDS-3UTR CAA 90 bp AATGAGGCAGCATGGGAGTCTTGGCTTGGAAATCAGGTCTGCGTTCTTGGTCCCATCAGGTCTGCGTTCTaGGTCCCTTCAGTCACTGAC +
Preference number: 5 (lower is better)
Translates to: NEAAWESWLGNQVCVLGPIRSAF*VPSVTD
Trigger: GTCAGTGACTGAAGGGACCAAGAACGCAGACCTGAT...GGGACCAAGAACGCAGACCTGATTTCCAAGCCAAGACTCCCATGCTGCCTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000534759.1
CDS TCA 90 bp ATCATGTCATCCTCCTCAGACTTCTTTAGCCCCTCAGACTTAGCCTaGTTGAGTTTGTTCGTCTTAGAGGCCCAAGGGACACGGGGACCG +
Preference number: 5 (lower is better)
Translates to: IMSSSSDFFSPSDLA*LSLFVLEAQGTRGP
Trigger: CGGTCCCCGTGTCCCTTGGGCCTCTAAGACGAACAAACTCAATCAGGCTAAGTCTGAGGGGCTAAAGAAGTCTGAGGAGGATGACATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309166.8
ENST00000525100.1
ENST00000531090.5
CDS-3UTR CAA 90 bp AGGGATTTCTTCCTTGTCTGTCTTCCCCATGATCAGCCGGTGCTTATCCAAGTTCGGAGCTTAGACAGGTaGGTTTCCATGAGGCGCCTC +
Preference number: 5 (lower is better)
Translates to: RDFFLVCLPHDQPVLIQVRSLDR*VSMRRL
Trigger: GAGGCGCCTCATGGAAACCAACCTGTCTAAGCTCCG...AACTTGGATAAGCACCGGCTGATCATGGGGAAGACAGACAAGGAAGAAATCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531090.5
CDS-3UTR CAA 90 bp GACAGGATACAACCCCATGTCCTGTCTGAGAACCACCACCACCCTGCTCGCAGCGACAAGTTTTTCTCATaGTCATCAACCACAGCTGCT +
Preference number: 5 (lower is better)
Translates to: DRIQPHVLSENHHHPARSDKFFS*SSTTAA
Trigger: AGCAGCTGTGGTTGATGACAATGAGAAAAACTTGTC...GCTGCGAGCAGGGTGGTGGTGGTTCTCAGACAGGACATGGGGTTGTATCCTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531142.1
CDS-3UTR CAA 90 bp ACAGGATACAACCCCATGTCCTGTCTGAGAACCACCACCACCCTGCTCGCAGCTCATTTGGGCACTCACTaGTCTTCATTCAAAGAGACT +
Preference number: 5 (lower is better)
Translates to: TGYNPMSCLRTTTTLLAAHLGTH*SSFKET
Trigger: AGTCTCTTTGAATGAAGACAAGTGAGTGCCCAAATG...AGCTGCGAGCAGGGTGGTGGTGGTTCTCAGACAGGACATGGGGTTGTATCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531090.5
ENST00000531142.1
CDS GCA 90 bp CCCAGTGTGATCACTAGGTGCTCAATCTGGCCCACTACTTTGAGATaGCGGGGTAGAGAAAGCTTTTCTCCTTCATGCTTGTGGGATTTG +
Preference number: 5 (lower is better)
Translates to: PSVITRCSIWPTTLR*RGRESFSPSCLWDL
Trigger: CAAATCCCACAAGCATGAAGGAGAAAAGCTTTCTCTACCCCGGCATCTCAAAGTAGTGGGCCAGATTGAGCACCTAGTGATCACACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS CCA 90 bp ACTTTGAGATGCCGGGGTAGAGAAAGCTTTTCTCCTTCATGCTTGTaGGATTTGACATGCTCCTTGAGTCCCAATCTGTCCACACAGGCC +
Preference number: 5 (lower is better)
Translates to: TLRCRGRESFSPSCL*DLTCSLSPNLSTQA
Trigger: GGCCTGTGTGGACAGATTGGGACTCAAGGAGCATGTCAAATCCCACAAGCATGAAGGAGAAAAGCTTTCTCTACCCCGGCATCTCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000525100.1
CDS-3UTR CAA 90 bp TCCCTGCCTCCCAGAAAGGTTTATCTAGATAGGCCTCTCCACCAACTGATTCTAATCAGGTCTGCGTTCTaGGTCCCTTCAGTCACTGAC +
Preference number: 5 (lower is better)
Translates to: SLPPRKVYLDRPLHQLILIRSAF*VPSVTD
Trigger: GTCAGTGACTGAAGGGACCAAGAACGCAGACCTGAT...TAGAATCAGTTGGTGGAGAGGCCTATCTAGATAAACCTTTCTGGGAGGCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CAA 90 bp TGGCACACAGGAGGGAGAGCTACCCAAATCATCCTAGCATCCATCTCCAGAGAAGCTCTGCCTCTTTCCTaGTATCAGGACAGAACTGAA +
Preference number: 5 (lower is better)
Translates to: WHTGGRATQIILASISREALPLS*YQDRTE
Trigger: TTCAGTTCTGTCCTGATACAAGGAAAGAGGCAGAGC...TTCTCTGGAGATGGATGCTAGGATGATTTGGGTAGCTCTCCCTCCTGTGTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS GCA 90 bp CCCACTACTTTGAGATGCCGGGGTAGAGAAAGCTTTTCTCCTTCATaGTTGTGGGATTTGACATGCTCCTTGAGTCCCAATCTGTCCACA +
Preference number: 5 (lower is better)
Translates to: PTTLRCRGRESFSPS*LWDLTCSLSPNLST
Trigger: TGTGGACAGATTGGGACTCAAGGAGCATGTCAAATCCCACAAGCATGAAGGAGAAAAGCTTTCTCTACCCCGGCATCTCAAAGTAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000525100.1
CDS GCA 90 bp CCCAGTTTTCTCTATCTGTCAACCCGGTGTGTATGCATGCACACGTaGAGACATGCTGCAGGCTGTAGTTATGCTTCTGAAGTGTTGTCT +
Preference number: 5 (lower is better)
Translates to: PSFLYLSTRCVCMHT*RHAAGCSYASEVLS
Trigger: AGACAACACTTCAGAAGCATAACTACAGCCTGCAGCATGTCTGCACGTGTGCATGCATACACACCGGGTTGACAGATAGAGAAAACTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CAA 90 bp TACTCCTGGTTTCCAGCTACTTCAGTCCTTGACAGACACATAATAGGATGGGCAATCTGGCCCACTACTTaGAGATGCCGGGGTAGAGAA +
Preference number: 5 (lower is better)
Translates to: YSWFPATSVLDRHIIGWAIWPTT*RCRGRE
Trigger: TTCTCTACCCCGGCATCTCAAAGTAGTGGGCCAGAT...TGCCCATCCTATTATGTGTCTGTCAAGGACTGAAGTAGCTGGAAACCAGGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CAA 90 bp TTGAAAGCCAAAGACAGGATACAACCCCATGTCCTGTCTGAGAACCACCACCACTGTGTGGCATCACCATaGCTCATTCTGATGTGTGCA +
Preference number: 5 (lower is better)
Translates to: LKAKDRIQPHVLSENHHHCVASP*LILMCA
Trigger: TGCACACATCAGAATGAGCAATGGTGATGCCACACA...GTGGTGGTGGTTCTCAGACAGGACATGGGGTTGTATCCTGTCTTTGGCTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531090.5
ENST00000531142.1
CDS-3UTR CAA 90 bp CTCGTTTTTAGGCACCAAGATGAGGGCCTAAATGTGACAGTTTGGGGCAAGGAAGATTTGACATGCTCCTaGAGTCCCAATCTGTCCACA +
Preference number: 5 (lower is better)
Translates to: LVFRHQDEGLNVTVWGKEDLTCS*SPNLST
Trigger: TGTGGACAGATTGGGACTCAAGGAGCATGTCAAATC...TTCCTTGCCCCAAACTGTCACATTTAGGCCCTCATCTTGGTGCCTAAAAACGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CAA 90 bp CTGACTGCAGTATGGCTGCCTAGTTGTTCAAATGATAGTCACCAAGTTCCTAGGTCATGCTTGTGGGATTaGACATGCTCCTTGAGTCCC +
Preference number: 5 (lower is better)
Translates to: LTAVWLPSCSNDSHQVPRSCLWD*TCSLSP
Trigger: GGGACTCAAGGAGCATGTCAAATCCCACAAGCATGA...CCTAGGAACTTGGTGACTATCATTTGAACAACTAGGCAGCCATACTGCAGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CAA 90 bp ATTAATATTCCTCTGTCTGTGGTTCCTCCTTTCCTCCAAGAGGTTCACAGTGAGCATGGGAGTCTTGGCTaGGAAATCAGGTCTGCGTTC +
Preference number: 5 (lower is better)
Translates to: INIPLSVVPPFLQEVHSEHGSLG*EIRSAF
Trigger: GAACGCAGACCTGATTTCCAAGCCAAGACTCCCATG...CTCACTGTGAACCTCTTGGAGGAAAGGAGGAACCACAGACAGAGGAATATTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000534759.1
CDS-3UTR CAA 90 bp AATATTCCTCTGTCTGTGGTTCCTCCTTTCCTCCAAGAGGTTCACAGTGAGAAAAAGTTGTCCTTAACATaGCCGGCTCCTGCTCTGCCT +
Preference number: 5 (lower is better)
Translates to: NIPLSVVPPFLQEVHSEKKLSLT*PAPALP
Trigger: AGGCAGAGCAGGAGCCGGCAATGTTAAGGACAACTT...TTTCTCACTGTGAACCTCTTGGAGGAAAGGAGGAACCACAGACAGAGGAATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CAA 90 bp CCACTCTGTGTGGCATCACCATTGCTCATTCTGATGTGTGCACTACAGAGTTTTGTGCACTACAGAGTTTaGTGGGGTGATGAACTCTGG +
Preference number: 5 (lower is better)
Translates to: PLCVASPLLILMCALQSFVHYRV*WGDELW
Trigger: CCAGAGTTCATCACCCCACAAAACTCTGTAGTGCAC...AAAACTCTGTAGTGCACACATCAGAATGAGCAATGGTGATGCCACACAGAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531090.5
ENST00000531142.1
CDS-3UTR CAA 90 bp TGTGGGGTGATGAACTCTGGGTGTGGGGAAGGGTGGATTTGTAGTATAATTGAAGTGCACTACAGAGTTTaGTGGGGTGATGAACTCTGG +
Preference number: 5 (lower is better)
Translates to: CGVMNSGCGEGWICSIIEVHYRV*WGDELW
Trigger: CCAGAGTTCATCACCCCACAAAACTCTGTAGTGCAC...TTCAATTATACTACAAATCCACCCTTCCCCACACCCAGAGTTCATCACCCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531090.5
ENST00000531142.1
CDS-3UTR CAA 90 bp AGAGAGGGATTAATATTCCTCTGTCTGTGGTTCCTCCTTTCCTCCAAGAGGTTCTATTCTCCCCAACCTTaGACAGGGGTCAGGAAATAC +
Preference number: 5 (lower is better)
Translates to: REGLIFLCLWFLLSSKRFYSPQP*TGVRKY
Trigger: GTATTTCCTGACCCCTGTCAAAGGTTGGGGAGAATA...GAACCTCTTGGAGGAAAGGAGGAACCACAGACAGAGGAATATTAATCCCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CAA 90 bp AAGCTAGTCATTTCCCTACCACTCTGTGTGGCATCACCATTGCTCATTCTGATGCTTGATCTGACCCATTaGGGCACTCACTTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: KLVISLPLCVASPLLILMLDLTH*GTHLSS
Trigger: TGAAGACAAGTGAGTGCCCAAATGGGTCAGATCAAG...CATCAGAATGAGCAATGGTGATGCCACACAGAGTGGTAGGGAAATGACTAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531090.5
ENST00000531142.1
CDS-3UTR CAA 90 bp GCTTTAGGGAGCTTCTGTGAGGCCCAAATCATTCAGAGTTCCAAAGGGCTGTTCAGCTATTTTTCTGACTaGTCCAAGCACTTCTATGAC +
Preference number: 5 (lower is better)
Translates to: ALGSFCEAQIIQSSKGLFSYFSD*SKHFYD
Trigger: GTCATAGAAGTGCTTGGACAAGTCAGAAAAATAGCT...GAACAGCCCTTTGGAACTCTGAATGATTTGGGCCTCACAGAAGCTCCCTAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CAA 90 bp TCCCTGCCTCCCAGAAAGGTTTATCTAGATAGGCCTCTCCACCAACTGATTCTAATACCAGGCAACCCATaGTATAGACACTTTGAGCTA +
Preference number: 5 (lower is better)
Translates to: SLPPRKVYLDRPLHQLILIPGNP*YRHFEL
Trigger: TAGCTCAAAGTGTCTATACAATGGGTTGCCTGGTAT...TAGAATCAGTTGGTGGAGAGGCCTATCTAGATAAACCTTTCTGGGAGGCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS TCA 90 bp GTTTTTCTCATTGTCATCCCAATCTGTCCACACAGGCCAAAGAGATaGGATTATATAGGCAGCCTGTGTCAACCAAGGCTTTCACATCCT +
Preference number: 5 (lower is better)
Translates to: VFLIVIPICPHRPKR*DYIGSLCQPRLSHP
Trigger: AGGATGTGAAAGCCTTGGTTGACACAGGCTGCCTATATAATCTCATCTCTTTGGCCTGTGTGGACAGATTGGGATGACAATGAGAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531090.5
CDS-3UTR CAA 90 bp GCTAGCTATTTTTCTGACTTGTCCAAGCACTTCTATGACCAAACTGAAGGGGAGATTAGATGGAAGGACTaGGTCCACAGCAAGTCACTA +
Preference number: 5 (lower is better)
Translates to: ASYFSDLSKHFYDQTEGEIRWKD*VHSKSL
Trigger: TAGTGACTTGCTGTGGACCAAGTCCTTCCATCTAAT...CTCCCCTTCAGTTTGGTCATAGAAGTGCTTGGACAAGTCAGAAAAATAGCTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CAA 90 bp TCCCTGCCTCCCAGAAAGGTTTATCTAGATAGGCCTCTCCACCAACTGATTCTATGGCAGCCCCTATACTaGACTAATAAAAGCAAATTC +
Preference number: 5 (lower is better)
Translates to: SLPPRKVYLDRPLHQLILWQPLY*TNKSKF
Trigger: GAATTTGCTTTTATTAGTCAAGTATAGGGGCTGCCA...TAGAATCAGTTGGTGGAGAGGCCTATCTAGATAAACCTTTCTGGGAGGCAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CAA 90 bp TTCACAGTGAGAAACCATTTCATTCATCTTTGTACGCTCGTTTTTAGGCACCAACATGGGAGTCTTGGCTaGGAAATCAGGTCTGCGTTC +
Preference number: 5 (lower is better)
Translates to: FTVRNHFIHLCTLVFRHQHGSLG*EIRSAF
Trigger: GAACGCAGACCTGATTTCCAAGCCAAGACTCCCATG...TTGGTGCCTAAAAACGAGCGTACAAAGATGAATGAAATGGTTTCTCACTGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000534759.1
CDS-3UTR CAA 90 bp TTCTCACCTCTTTGCCCTCCTGTTAAAGGCTTGAATACAAATGAGGCAGCATGGCCTAAATGTGACAGTTaGGGGCAAGGAACTTTTACT +
Preference number: 5 (lower is better)
Translates to: FSPLCPPVKGLNTNEAAWPKCDS*GQGTFT
Trigger: AGTAAAAGTTCCTTGCCCCAAACTGTCACATTTAGG...CCATGCTGCCTCATTTGTATTCAAGCCTTTAACAGGAGGGCAAAGAGGTGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000534759.1
CDS-3UTR CAA 90 bp TCTCCACCAACTGATTCTACTCAGTCTACTCCCTTCTATTCTGGCCTTGCTCTTAAGCTTCAAGAAACCTaGTATTCTCCCCAACCTTTG +
Preference number: 5 (lower is better)
Translates to: SPPTDSTQSTPFYSGLALKLQET*YSPQPL
Trigger: CAAAGGTTGGGGAGAATACAAGGTTTCTTGAAGCTT...AAGAGCAAGGCCAGAATAGAAGGGAGTAGACTGAGTAGAATCAGTTGGTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CAA 90 bp TTCCTTGTCTGTCTTCCCCATGATCAGCCGGTGCTTATCCAAGTTTATGATGCACATTTGGGCACTCACTaGTCTTCATTCAAAGAGACT +
Preference number: 5 (lower is better)
Translates to: FLVCLPHDQPVLIQVYDAHLGTH*SSFKET
Trigger: AGTCTCTTTGAATGAAGACAAGTGAGTGCCCAAATG...TGCATCATAAACTTGGATAAGCACCGGCTGATCATGGGGAAGACAGACAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531090.5
CDS-3UTR CAA 90 bp CATTTGGGCACTCACTTGTCTTCATTCAAAGAGACTGTCTCCACAAAAGGGATTTGTGTGGCATCACCATaGCTCATTCTGATGTGTGCA +
Preference number: 5 (lower is better)
Translates to: HLGTHLSSFKETVSTKGICVASP*LILMCA
Trigger: TGCACACATCAGAATGAGCAATGGTGATGCCACACA...AATCCCTTTTGTGGAGACAGTCTCTTTGAATGAAGACAAGTGAGTGCCCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531090.5
CDS-3UTR CAA 90 bp TCACCTCTTTGCCCTCCTGTTAAAGGCTTGAATACAAATGAGGCAGCATGGGAGTATGCTTCTGAAGTGTaGTCTTCATTCAAAGAGACT +
Preference number: 5 (lower is better)
Translates to: SPLCPPVKGLNTNEAAWEYASEV*SSFKET
Trigger: AGTCTCTTTGAATGAAGACAACACTTCAGAAGCATA...CTCCCATGCTGCCTCATTTGTATTCAAGCCTTTAACAGGAGGGCAAAGAGGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CAA 90 bp TCTGCGTTCTTGGTCCCTTCAGTCACTGACCTAATATATGAACTTAGACAATTCTATCCTGGCACCTGTTaGAAACAGCTGAAAGGAGGT +
Preference number: 5 (lower is better)
Translates to: SAFLVPSVTDLIYELRQFYPGTC*KQLKGG
Trigger: ACCTCCTTTCAGCTGTTTCAAACAGGTGCCAGGATA...GAATTGTCTAAGTTCATATATTAGGTCAGTGACTGAAGGGACCAAGAACGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CAA 90 bp TCTGGGTGTGGGGAAGGGTGGATTTGTAGTATAATTGAAAGCCAAAGACAGGATGACAAGTTTTTCTCATaGTCATCCCAATCTGTCCAC +
Preference number: 5 (lower is better)
Translates to: SGCGEGWICSIIESQRQDDKFFS*SSQSVH
Trigger: GTGGACAGATTGGGATGACAATGAGAAAAACTTGTC...ATCCTGTCTTTGGCTTTCAATTATACTACAAATCCACCCTTCCCCACACCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531090.5
CDS-3UTR CAA 90 bp TTGTATTCTCCCCAACCTTTGACAGGGGTCAGGAAATACTGGGCAGTTATAAAAGACAAGTTTTTCTCATaGTCATCAACCACAGCTGCT +
Preference number: 5 (lower is better)
Translates to: LYSPQPLTGVRKYWAVIKDKFFS*SSTTAA
Trigger: AGCAGCTGTGGTTGATGACAATGAGAAAAACTTGTC...TTTTATAACTGCCCAGTATTTCCTGACCCCTGTCAAAGGTTGGGGAGAATACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CAA 90 bp AGAAACCATTTCATTCATCTTTGTACGCTCGTTTTTAGGCACCAAGATGAGGGCAAGTCACTACGGCATTaGGTTCAAACCCAGTTTTCT +
Preference number: 5 (lower is better)
Translates to: RNHFIHLCTLVFRHQDEGKSLRH*VQTQFS
Trigger: AGAAAACTGGGTTTGAACCAAATGCCGTAGTGACTT...GCCCTCATCTTGGTGCCTAAAAACGAGCGTACAAAGATGAATGAAATGGTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS-3UTR CAA 90 bp TCCTCCAAGAGGTTCACAGTGAGAAACCATTTCATTCATCTTTGTACGCTCGTTCCTAAATGTGACAGTTaGGGGCAAGGAACTTTTACT +
Preference number: 5 (lower is better)
Translates to: SSKRFTVRNHFIHLCTLVPKCDS*GQGTFT
Trigger: AGTAAAAGTTCCTTGCCCCAAACTGTCACATTTAGG...AACGAGCGTACAAAGATGAATGAAATGGTTTCTCACTGTGAACCTCTTGGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000534759.1
CDS-3UTR CAA 90 bp CAATTCCATATCAGAGAGGGATTAATATTCCTCTGTCTGTGGTTCCTCCTTTCCCTAAGAAATAGAAAATaGTACCAGGTAGGGTCTGTG +
Preference number: 5 (lower is better)
Translates to: QFHIREGLIFLCLWFLLSLRNRK*YQVGSV
Trigger: CACAGACCCTACCTGGTACAATTTTCTATTTCTTAG...GGAAAGGAGGAACCACAGACAGAGGAATATTAATCCCTCTCTGATATGGAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS TCA 72 bp CCTCCCGCATGTCGGTCTCCTTGCGGCCGCCCTCAGTaGGGAGCCCTGAGTAAAACATCGCTGAGGCGCCGG +
Preference number: 6 (lower is better)
Translates to: PPACRSPCGRPQ*GALSKTSLRRR
Trigger: CCGGCGCCTCAGCGATGTTTTACTCAGGGCTCCTCACTGAGGGCGGCCGCAAGGAGACCGACATGCGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309166.8
ENST00000525100.1
ENST00000531090.5
CDS GCA 72 bp TTGTGGATGAACTGCACCGCCTGCTTCATCCGGCGCTaGTGTCGCAGTGACGCCGCCTCCCGCATGTCGGTC +
Preference number: 6 (lower is better)
Translates to: LWMNCTACFIRR*CRSDAASRMSV
Trigger: GACCGACATGCGGGAGGCGGCGTCACTGCGACAGCAGCGCCGGATGAAGCAGGCGGTGCAGTTCATCCACAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309166.8
ENST00000525100.1
ENST00000531090.5
CDS GCA 72 bp CAGTCCAGGCGGAGGGAGCCCAGTGTGATCACTAGGTaGTCAATCTGGCCCACTACTTTGAGATGCCGGGGT +
Preference number: 6 (lower is better)
Translates to: QSRRREPSVITR*SIWPTTLRCRG
Trigger: ACCCCGGCATCTCAAAGTAGTGGGCCAGATTGAGCACCTAGTGATCACACTGGGCTCCCTCCGCCTGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS CAA 72 bp CAAGGGACACGGGGACCGCTTCGGAGCTTAGACAGGTaGGTTTCCATGAGGCGCCTCATGTCCTTGGACGAG +
Preference number: 6 (lower is better)
Translates to: QGTRGPLRSLDR*VSMRRLMSLDE
Trigger: CTCGTCCAAGGACATGAGGCGCCTCATGGAAACCAACCTGTCTAAGCTCCGAAGCGGTCCCCGTGTCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525100.1
CDS CCA 72 bp CGGAGGGAGCCCAGTGTGATCACTAGGTGCTCAATCTaGCCCACTACTTTGAGATGCCGGGGTAGAGAAAGC +
Preference number: 6 (lower is better)
Translates to: RREPSVITRCSI*PTTLRCRGRES
Trigger: GCTTTCTCTACCCCGGCATCTCAAAGTAGTGGGCCAGATTGAGCACCTAGTGATCACACTGGGCTCCCTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS CAA 90 bp AGGGAGCCCAGTGTGATCACTAGGTGCTCAATCTGGCCCACTACTTaGAGATGCCGGGGTAGAGAAAGCTTTTCTCCTTCATGCTTGTGG +
Preference number: 6 (lower is better)
Translates to: REPSVITRCSIWPTT*RCRGRESFSPSCLW
Trigger: CCACAAGCATGAAGGAGAAAAGCTTTCTCTACCCCGGCATCTCAAAGTAGTGGGCCAGATTGAGCACCTAGTGATCACACTGGGCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS TCA 72 bp TCCTCCTCAGACTTCTTTAGCCCCTCAGACTTAGCCTaGTTGAGTTTGTTCGTCTTAGAGGCCCAAGGGACA +
Preference number: 6 (lower is better)
Translates to: SSSDFFSPSDLA*LSLFVLEAQGT
Trigger: TGTCCCTTGGGCCTCTAAGACGAACAAACTCAATCAGGCTAAGTCTGAGGGGCTAAAGAAGTCTGAGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309166.8
ENST00000525100.1
ENST00000531090.5
CDS GCA 72 bp CCAGTTTTCTCTATCTGTCAACCCGGTGTGTATGCATaGACACGTGCAGACATGCTGCAGGCTGTAGTTATG +
Preference number: 6 (lower is better)
Translates to: PVFSICQPGVYA*TRADMLQAVVM
Trigger: CATAACTACAGCCTGCAGCATGTCTGCACGTGTGCATGCATACACACCGGGTTGACAGATAGAGAAAACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS CCA 72 bp TGCCGGGGTAGAGAAAGCTTTTCTCCTTCATGCTTGTaGGATTTGACATGCTCCTTGAGTCCCAATCTGTCC +
Preference number: 6 (lower is better)
Translates to: CRGRESFSPSCL*DLTCSLSPNLS
Trigger: GGACAGATTGGGACTCAAGGAGCATGTCAAATCCCACAAGCATGAAGGAGAAAAGCTTTCTCTACCCCGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000525100.1
CDS GCA 72 bp ATCACTAGGTGCTCAATCTGGCCCACTACTTTGAGATaGCGGGGTAGAGAAAGCTTTTCTCCTTCATGCTTG +
Preference number: 6 (lower is better)
Translates to: ITRCSIWPTTLR*RGRESFSPSCL
Trigger: CAAGCATGAAGGAGAAAAGCTTTCTCTACCCCGGCATCTCAAAGTAGTGGGCCAGATTGAGCACCTAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS CAA 72 bp AGTGTGATCACTAGGTGCTCAATCTGGCCCACTACTTaGAGATGCCGGGGTAGAGAAAGCTTTTCTCCTTCA +
Preference number: 6 (lower is better)
Translates to: SVITRCSIWPTT*RCRGRESFSPS
Trigger: TGAAGGAGAAAAGCTTTCTCTACCCCGGCATCTCAAAGTAGTGGGCCAGATTGAGCACCTAGTGATCACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309166.8
CDS CAA 90 bp ACTACTTTGAGATGCCGGGGTAGAGAAAGCTTTTCTCCTTCATGCTaGTGGGATTTGACATGCTCCTTGAGTCCCAATCTGTCCACACAG +
Preference number: 6 (lower is better)
Translates to: TTLRCRGRESFSPSC*WDLTCSLSPNLSTQ
Trigger: CTGTGTGGACAGATTGGGACTCAAGGAGCATGTCAAATCCCACAAGCATGAAGGAGAAAAGCTTTCTCTACCCCGGCATCTCAAAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000525100.1
CDS GCA 72 bp GAAAGCTTTTCTCCTTCATGCTTGTGGGATTTGACATaGTCCTTGAGTCCCAATCTGTCCACACAGGCCAAA +
Preference number: 6 (lower is better)
Translates to: ESFSPSCLWDLT*SLSPNLSTQAK
Trigger: TTTGGCCTGTGTGGACAGATTGGGACTCAAGGAGCATGTCAAATCCCACAAGCATGAAGGAGAAAAGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309166.8
ENST00000525100.1
CDS TCA 72 bp ATTGTCATCCCAATCTGTCCACACAGGCCAAAGAGATaGGATTATATAGGCAGCCTGTGTCAACCAAGGCTT +
Preference number: 6 (lower is better)
Translates to: IVIPICPHRPKR*DYIGSLCQPRL
Trigger: AAGCCTTGGTTGACACAGGCTGCCTATATAATCTCATCTCTTTGGCCTGTGTGGACAGATTGGGATGACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531090.5