RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NRG4 (Homo sapiens)

Ensembl gene IDs: ENSG00000169752

Ensembl transcript IDs: ENST00000394907.8, ENST00000461391.5, ENST00000472094.5, ENST00000498750.5, ENST00000562114.5, ENST00000563204.5, ENST00000563582.1, ENST00000563910.5, ENST00000565661.5, ENST00000566417.5, ENST00000567126.5, ENST00000567467.5, ENST00000567936.5, ENST00000568073.5, ENST00000569343.5

Found 417 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTTGACGAGGACATAGTTCAGAGACAGGCTGTTAGGTTTGGCCGGTaGATGCCCTTCTGCCTAAGCCATTTACCAGCCCCAGACCTTTCC +
Preference number: 1 (lower is better)
Translates to: LDEDIVQRQAVRFGR*MPFCLSHLPAPDLS
Trigger: GGAAAGGTCTGGGGCTGGTAAATGGCTTAGGCAGAAGGGCATGCACCGGCCAAACCTAACAGCCTGTCTCTGAACTATGTCCTCGTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
3UTR GCA 90 bp ATAGTTCAGAGACAGGCTGTTAGGTTTGGCCGGTGCATGCCCTTCTaGCTAAGCCATTTACCAGCCCCAGACCTTTCCACTGCTCCAAGA +
Preference number: 1 (lower is better)
Translates to: IVQRQAVRFGRCMPF*LSHLPAPDLSTAPR
Trigger: TCTTGGAGCAGTGGAAAGGTCTGGGGCTGGTAAATGGCTTAGGCAGAAGGGCATGCACCGGCCAAACCTAACAGCCTGTCTCTGAACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
3UTR TCA 90 bp CTCGTCTCTACCAGGTTGATATCATACTGGACTGAACTGGCTCTCTaGAAGTGGCCTTTCCCAGGCAGGAGTGCAGTAGTGCAGTCATGG +
Preference number: 1 (lower is better)
Translates to: LVSTRLISYWTELAL*KWPFPGRSAVVQSW
Trigger: CCATGACTGCACTACTGCACTCCTGCCTGGGAAAGGCCACTTTCAGAGAGCCAGTTCAGTCCAGTATGATATCAACCTGGTAGAGACGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563204.5
ENST00000565661.5
3UTR TCA 90 bp GTTCATGACTGTGGTGGGCACTGGTACTGCTCGTCTCTACCAGGTTaGTATCATACTGGACTGAACTGGCTCTCTGAAAGTGGCCTTTCC +
Preference number: 1 (lower is better)
Translates to: VHDCGGHWYCSSLPG*YHTGLNWLSESGLS
Trigger: GGAAAGGCCACTTTCAGAGAGCCAGTTCAGTCCAGTATGATATCAACCTGGTAGAGACGAGCAGTACCAGTGCCCACCACAGTCATGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
3UTR GCA 90 bp CAATGTGACTTCGAATTATACTGGTATCACCCCCTACTTAGCAGTTaGCGATGGACTGATGCACATTACAGAAGCACACACACCTTGCAG +
Preference number: 1 (lower is better)
Translates to: QCDFELYWYHPLLSS*RWTDAHYRSTHTLQ
Trigger: CTGCAAGGTGTGTGTGCTTCTGTAATGTGCATCAGTCCATCGGCAACTGCTAAGTAGGGGGTGATACCAGTATAATTCGAAGTCACATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR CCA 90 bp GACTTCGAATTATACTGGTATCACCCCCTACTTAGCAGTTGCCGATaGACTGATGCACATTACAGAAGCACACACACCTTGCAGCAGAAT +
Preference number: 1 (lower is better)
Translates to: DFELYWYHPLLSSCR*TDAHYRSTHTLQQN
Trigger: ATTCTGCTGCAAGGTGTGTGTGCTTCTGTAATGTGCATCAGTCCATCGGCAACTGCTAAGTAGGGGGTGATACCAGTATAATTCGAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR GCA 90 bp ATCTTCATATATCCCTTAGGGTTTCTCTCTAGGTGTGTGAACATTTaGCTCTGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATG +
Preference number: 1 (lower is better)
Translates to: IFIYPLGFLSRCVNI*LWLLQHISFLGRVM
Trigger: CATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCAGAGGCAAATGTTCACACACCTAGAGAGAAACCCTAAGGGATATATGAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
3UTR CCA 90 bp ATATATCCCTTAGGGTTTCTCTCTAGGTGTGTGAACATTTGCCTCTaGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAAC +
Preference number: 1 (lower is better)
Translates to: IYPLGFLSRCVNICL*LLQHISFLGRVMLN
Trigger: GTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCAGAGGCAAATGTTCACACACCTAGAGAGAAACCCTAAGGGATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
3UTR GCA 90 bp CAAATATATGACATTCTGGAGAAAGCAAAGTTAGTAAAGACTGGTTaGCAGAGGTTCAGTGGGAGAGAGGGAGGGGTAAATACATGGAGT +
Preference number: 1 (lower is better)
Translates to: QIYDILEKAKLVKTG*QRFSGREGGVNTWS
Trigger: ACTCCATGTATTTACCCCTCCCTCTCTCCCACTGAACCTCTGGCAACCAGTCTTTACTAACTTTGCTTTCTCCAGAATGTCATATATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
3UTR CCA 90 bp AGGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCCCAACTTaGAATAAGACAAAGAGAAGCCAGCATCAGTTCACTTCCTGTACA +
Preference number: 1 (lower is better)
Translates to: RSQQPSNAGKISCPT*NKTKRSQHQFTSCT
Trigger: TGTACAGGAAGTGAACTGATGCTGGCTTCTCTTTGTCTTATTCCAAGTTGGGCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000565661.5
3UTR GCA 90 bp ATTGAAAGCGGAGGCTTGAGGGTATATTTGTATACCAGTGTTCACTaGAGCATTATTCACCGTAGTCAAAAGGTAGAAACAACCCAAATA +
Preference number: 1 (lower is better)
Translates to: IESGGLRVYLYTSVH*SIIHRSQKVETTQI
Trigger: TATTTGGGTTGTTTCTACCTTTTGACTACGGTGAATAATGCTGCAGTGAACACTGGTATACAAATATACCCTCAAGCCTCCGCTTTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
3UTR CCA 90 bp TTAGTGTGGGATCATGAAAAAGTTCCGGAGGTGCATAGTGGTGACTaGTACATACAACGAATGTATTTAATGCCTTTAAACTGTAACTTC +
Preference number: 1 (lower is better)
Translates to: LVWDHEKVPEVHSGD*YIQRMYLMPLNCNF
Trigger: GAAGTTACAGTTTAAAGGCATTAAATACATTCGTTGTATGTACCAGTCACCACTATGCACCTCCGGAACTTTTTCATGATCCCACACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
3UTR TCA 90 bp CATTTGATTCAGCAATTGCATTTCTGGGTATATACACAAAATAATTaGAAGCGGAGGCTTGAGGGTATATTTGTATACCAGTGTTCACTG +
Preference number: 1 (lower is better)
Translates to: HLIQQLHFWVYTQNN*KRRLEGIFVYQCSL
Trigger: CAGTGAACACTGGTATACAAATATACCCTCAAGCCTCCGCTTTCAATTATTTTGTGTATATACCCAGAAATGCAATTGCTGAATCAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
3UTR CCA 90 bp GATGCACATTACAGAAGCACACACACCTTGCAGCAGAATGGATTATaGTTCATGATACGAGTTACACAAGCGTTTTATTTAAGAAATAAA +
Preference number: 1 (lower is better)
Translates to: DAHYRSTHTLQQNGL*FMIRVTQAFYLRNK
Trigger: TTTATTTCTTAAATAAAACGCTTGTGTAACTCGTATCATGAACCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCTGTAATGTGCATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR-3UTR GCA 90 bp GTTAGGTTTGGCCGGTGCATGCCCTTCTGCCTAAGCCATTTACCAGCCCCAGACGTAGAGAAGCCAGCGTaGATCCCAGCCTTGACGAGG +
Preference number: 2 (lower is better)
Translates to: VRFGRCMPFCLSHLPAPDVEKPA*IPALTR
Trigger: CCTCGTCAAGGCTGGGATGCACGCTGGCTTCTCTAC...GTCTGGGGCTGGTAAATGGCTTAGGCAGAAGGGCATGCACCGGCCAAACCTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
3UTR-3UTR TCA 90 bp GTTAGGTTTGGCCGGTGCATGCCCTTCTGCCTAAGCCATTTACCAGCCCCAGACCGTGCATCCCAGCCTTaGCGAGGACATAGTTCAGAG +
Preference number: 2 (lower is better)
Translates to: VRFGRCMPFCLSHLPAPDRASQP*RGHSSE
Trigger: CTCTGAACTATGTCCTCGTCAAGGCTGGGATGCACG...GTCTGGGGCTGGTAAATGGCTTAGGCAGAAGGGCATGCACCGGCCAAACCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
3UTR-3UTR GCA 90 bp CTTGACGAGGACATAGTTCAGAGACAGGCTGTTAGGTTTGGCCGGTGCATGCCCGTAGAGAAGCCAGCGTaGATCCCAGCCTTGACGAGG +
Preference number: 2 (lower is better)
Translates to: LDEDIVQRQAVRFGRCMPVEKPA*IPALTR
Trigger: CCTCGTCAAGGCTGGGATGCACGCTGGCTTCTCTAC...GGGCATGCACCGGCCAAACCTAACAGCCTGTCTCTGAACTATGTCCTCGTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
3UTR-3UTR TCA 90 bp GCTGTTAGGTTTGGCCGGTGCATGCCCTTCTGCCTAAGCCATTTACCAGCCCCAACTGAACTGGCTCTCTaGAAGTGGCCTTTCCTGCAA +
Preference number: 2 (lower is better)
Translates to: AVRFGRCMPFCLSHLPAPTELAL*KWPFLQ
Trigger: TTGCAGGAAAGGCCACTTTCAGAGAGCCAGTTCAGT...TGGGGCTGGTAAATGGCTTAGGCAGAAGGGCATGCACCGGCCAAACCTAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000472094.5
3UTR-3UTR TCA 90 bp GTTAGGTTTGGCCGGTGCATGCCCTTCTGCCTAAGCCATTTACCAGCCCCAGACTCGTCTCTACCAGGTTaGTATCATACTGGACTGAAC +
Preference number: 2 (lower is better)
Translates to: VRFGRCMPFCLSHLPAPDSSLPG*YHTGLN
Trigger: GTTCAGTCCAGTATGATATCAACCTGGTAGAGACGA...GTCTGGGGCTGGTAAATGGCTTAGGCAGAAGGGCATGCACCGGCCAAACCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000472094.5
3UTR-3UTR TCA 90 bp GCACTGGTACTGCTCGTCTCTACCAGGTTGATATCATACTGGACTGAACTGGCTACTGAACTGGCTCTCTaGAAGTGGCCTTTCCCAGGC +
Preference number: 2 (lower is better)
Translates to: ALVLLVSTRLISYWTELATELAL*KWPFPG
Trigger: GCCTGGGAAAGGCCACTTTCAGAGAGCCAGTTCAGT...AGCCAGTTCAGTCCAGTATGATATCAACCTGGTAGAGACGAGCAGTACCAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563204.5
ENST00000565661.5
3UTR-3UTR TCA 90 bp CAGCTAGGACTACATGCATGTGTTACCACACCTGCAAAGGAAGTAGAAGGCTCCACTGAACTGGCTCTCTaGAAGTGGCCTTTCCCAGGC +
Preference number: 2 (lower is better)
Translates to: QLGLHACVTTPAKEVEGSTELAL*KWPFPG
Trigger: GCCTGGGAAAGGCCACTTTCAGAGAGCCAGTTCAGT...GGAGCCTTCTACTTCCTTTGCAGGTGTGGTAACACATGCATGTAGTCCTAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565661.5
3UTR-3UTR TCA 90 bp TCAGTGTTGTTCATGACTGTGGTGGGCACTGGTACTGCTCGTCTCTACCAGGTTCTTCAGTGTTGTTCATaGCTGTGGTGGGCACTGGTA +
Preference number: 2 (lower is better)
Translates to: SVLFMTVVGTGTARLYQVLQCCS*LWWALV
Trigger: TACCAGTGCCCACCACAGTCATGAACAACACTGAAG...AACCTGGTAGAGACGAGCAGTACCAGTGCCCACCACAGTCATGAACAACACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
3UTR-3UTR GCA 90 bp TGGGCACTGGTACTGCTCGTCTCTACCAGGTTGATATCATACTGGACTGAACTGTTTCCCAGGCAGGAGTaGAGTAGTGCAGTCATGGCT +
Preference number: 2 (lower is better)
Translates to: WALVLLVSTRLISYWTELFPRQE*SSAVMA
Trigger: AGCCATGACTGCACTACTGCACTCCTGCCTGGGAAA...CAGTTCAGTCCAGTATGATATCAACCTGGTAGAGACGAGCAGTACCAGTGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563204.5
ENST00000565661.5
3UTR-3UTR TCA 90 bp GTAGTGCAGTCATGGCTTAACTGCAGCCTCTCATTCCTGGGCTCAAGCGATCTTTTCTCTCTAGGTGTGTaGACATTTGCCTCTGGTTGC +
Preference number: 2 (lower is better)
Translates to: VVQSWLNCSLSFLGSSDLFSLGV*TFASGC
Trigger: GCAACCAGAGGCAAATGTTCACACACCTAGAGAGAA...AAGATCGCTTGAGCCCAGGAATGAGAGGCTGCAGTTAAGCCATGACTGCACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565661.5
3UTR-3UTR TCA 90 bp CCTCTGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGACTGAACTGGCTCTCTaGAAGTGGCCTTTCCTGCAA +
Preference number: 2 (lower is better)
Translates to: PLVASAHQLSGESHVEPMTELAL*KWPFLQ
Trigger: TTGCAGGAAAGGCCACTTTCAGAGAGCCAGTTCAGT...CATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000568073.5
3UTR-3UTR GCA 90 bp GCAGTTGCCGATGGACTGATGCACATTACAGAAGCACACACACCTTGCAGCAGAAGGTGTGTGAACATTTaGCTCTGGTTGCTTCAGCAC +
Preference number: 2 (lower is better)
Translates to: AVADGLMHITEAHTPCSRRCVNI*LWLLQH
Trigger: GTGCTGAAGCAACCAGAGGCAAATGTTCACACACCT...TCTGCTGCAAGGTGTGTGTGCTTCTGTAATGTGCATCAGTCCATCGGCAACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR-3UTR GCA 90 bp CATTCTGGAGAAAGCAAAGTTAGTAAAGACTGGTTGCCAGAGGTTCAGTGGGAGCGGTGCATGCCCTTCTaGCTAAGCCATTTACCAGCC +
Preference number: 2 (lower is better)
Translates to: HSGESKVSKDWLPEVQWERCMPF*LSHLPA
Trigger: GGCTGGTAAATGGCTTAGGCAGAAGGGCATGCACCG...CTCCCACTGAACCTCTGGCAACCAGTCTTTACTAACTTTGCTTTCTCCAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
3UTR-3UTR TCA 90 bp TCAGTGTTGTTCATGACTGTGGTGGGCACTGGTACTGCTCGTCTCTACCAGGTTTGGGGAGAGTCATGTTaGACCAATGTGACTTCGAAT +
Preference number: 2 (lower is better)
Translates to: SVLFMTVVGTGTARLYQVWGESC*TNVTSN
Trigger: ATTCGAAGTCACATTGGTTCAACATGACTCTCCCCA...AACCTGGTAGAGACGAGCAGTACCAGTGCCCACCACAGTCATGAACAACACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
3UTR-3UTR GCA 90 bp GACCCACTGAATTCACAGCACTTACACTGGGCCAGACTGTGTAGAGAAGCCAGCCCCAGACCTTTCCACTaGTCCAAGACTTTATTTTCA +
Preference number: 2 (lower is better)
Translates to: DPLNSQHLHWARLCREASPRPFH*SKTLFS
Trigger: TGAAAATAAAGTCTTGGAGCAGTGGAAAGGTCTGGG...GCTGGCTTCTCTACACAGTCTGGCCCAGTGTAAGTGCTGTGAATTCAGTGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
3UTR-3UTR GCA 90 bp GGACTACATGCATGTGTTACCACACCTGCAAAGGAAGTAGAAGGCTCCAATGATTTTCCCAGGCAGGAGTaGAGTAGTGCAGTCATGGCT +
Preference number: 2 (lower is better)
Translates to: GLHACVTTPAKEVEGSNDFPRQE*SSAVMA
Trigger: AGCCATGACTGCACTACTGCACTCCTGCCTGGGAAA...ATCATTGGAGCCTTCTACTTCCTTTGCAGGTGTGGTAACACATGCATGTAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565661.5
3UTR-3UTR CCA 90 bp GCTGTTAGGTTTGGCCGGTGCATGCCCTTCTGCCTAAGCCATTTACCAGCCCCACAGCAGAATGGATTATaGTTCATGATACGAGTTACA +
Preference number: 2 (lower is better)
Translates to: AVRFGRCMPFCLSHLPAPQQNGL*FMIRVT
Trigger: TGTAACTCGTATCATGAACCATAATCCATTCTGCTG...TGGGGCTGGTAAATGGCTTAGGCAGAAGGGCATGCACCGGCCAAACCTAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
3UTR-3UTR CCA 90 bp CCTCTGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGTTGGATGCTGGAGCCTaGGAGAAAAACCTCTTCACA +
Preference number: 2 (lower is better)
Translates to: PLVASAHQLSGESHVEPMLDAGA*EKNLFT
Trigger: TGTGAAGAGGTTTTTCTCCCAGGCTCCAGCATCCAA...CATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
3UTR-3UTR TCA 90 bp TTGTTCATGACTGTGGTGGGCACTGGTACTGCTCGTCTCTACCAGGTTGATATCTGGGGAGAGTCATGTTaGACCAATGTGACTTCGAAT +
Preference number: 2 (lower is better)
Translates to: LFMTVVGTGTARLYQVDIWGESC*TNVTSN
Trigger: ATTCGAAGTCACATTGGTTCAACATGACTCTCCCCA...GATATCAACCTGGTAGAGACGAGCAGTACCAGTGCCCACCACAGTCATGAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
3UTR-3UTR TCA 90 bp ATTTGCCTCTGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACTTCTCTCTAGGTGTGTaGACATTTGCCTCTGGTTGC +
Preference number: 2 (lower is better)
Translates to: ICLWLLQHISFLGRVMLNFSLGV*TFASGC
Trigger: GCAACCAGAGGCAAATGTTCACACACCTAGAGAGAA...GTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCAGAGGCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
3UTR-3UTR TCA 90 bp CCTCTGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGTCGTCTCTACCAGGTTaGTATCATACTGGACTGAAC +
Preference number: 2 (lower is better)
Translates to: PLVASAHQLSGESHVEPMSSLPG*YHTGLN
Trigger: GTTCAGTCCAGTATGATATCAACCTGGTAGAGACGA...CATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
3UTR-3UTR GCA 90 bp AGTTGCCGATGGACTGATGCACATTACAGAAGCACACACACCTTGCAGCAGAATAGGTGTGTGAACATTTaGCTCTGGTTGCTTCAGCAC +
Preference number: 2 (lower is better)
Translates to: SCRWTDAHYRSTHTLQQNRCVNI*LWLLQH
Trigger: GTGCTGAAGCAACCAGAGGCAAATGTTCACACACCT...ATTCTGCTGCAAGGTGTGTGTGCTTCTGTAATGTGCATCAGTCCATCGGCAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR-3UTR GCA 90 bp GCAGTTGCCGATGGACTGATGCACATTACAGAAGCACACACACCTTGCAGCAGAGCAGGGAAAATCTCATaGCCAACTTGGAATAAGACA +
Preference number: 2 (lower is better)
Translates to: AVADGLMHITEAHTPCSRAGKIS*PTWNKT
Trigger: TGTCTTATTCCAAGTTGGGCATGAGATTTTCCCTGC...TCTGCTGCAAGGTGTGTGTGCTTCTGTAATGTGCATCAGTCCATCGGCAACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR-3UTR GCA 90 bp GTTGCCGATGGACTGATGCACATTACAGAAGCACACACACCTAGTGGTGTTTCAGAAAGTGGCCTTTCCTaGAAAGGAAGTAGAAGGCTC +
Preference number: 2 (lower is better)
Translates to: VADGLMHITEAHTPSGVSESGLS*KGSRRL
Trigger: GAGCCTTCTACTTCCTTTGCAGGAAAGGCCACTTTC...TGAAACACCACTAGGTGTGTGTGCTTCTGTAATGTGCATCAGTCCATCGGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568073.5
3UTR-3UTR CCA 90 bp CTGGTACTGCTCGTCTCTACCAGGTTGATATCATACTGGACTGAACTGGCTCTCCTTAGCAGTTGCCGATaGACTGATGCACATTACAGA +
Preference number: 2 (lower is better)
Translates to: LVLLVSTRLISYWTELALLSSCR*TDAHYR
Trigger: TCTGTAATGTGCATCAGTCCATCGGCAACTGCTAAG...GAGAGCCAGTTCAGTCCAGTATGATATCAACCTGGTAGAGACGAGCAGTACCAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
3UTR-3UTR CCA 90 bp ACTGGACTGAACTGGCTCTCTGAAAGTGGCCTTTCCTGCAAAGGAAGTAGAAGGCTTAGCAGTTGCCGATaGACTGATGCACATTACAGA +
Preference number: 2 (lower is better)
Translates to: TGLNWLSESGLSCKGSRRLSSCR*TDAHYR
Trigger: TCTGTAATGTGCATCAGTCCATCGGCAACTGCTAAG...CCTTCTACTTCCTTTGCAGGAAAGGCCACTTTCAGAGAGCCAGTTCAGTCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000568073.5
3UTR-3UTR CCA 90 bp ATTTGCCTCTGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACGTGAACATTTGCCTCTaGTTGCTTCAGCACATCAGC +
Preference number: 2 (lower is better)
Translates to: ICLWLLQHISFLGRVMLNVNICL*LLQHIS
Trigger: GCTGATGTGCTGAAGCAACCAGAGGCAAATGTTCAC...GTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCAGAGGCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
3UTR-3UTR CCA 90 bp TGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGTGACGTGAACATTTGCCTCTaGTTGCTTCAGCACATCAGC +
Preference number: 2 (lower is better)
Translates to: WLLQHISFLGRVMLNQCDVNICL*LLQHIS
Trigger: GCTGATGTGCTGAAGCAACCAGAGGCAAATGTTCAC...GTCACATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
3UTR-3UTR CCA 90 bp TGGGCACTGGTACTGCTCGTCTCTACCAGGTTGATATCATACTGGACTGAACTGAGGTTACTTTTAGTTTaGATGCTGGAGCCTGGGAGA +
Preference number: 2 (lower is better)
Translates to: WALVLLVSTRLISYWTELRLLLV*MLEPGR
Trigger: TCTCCCAGGCTCCAGCATCCAAACTAAAAGTAACCT...CAGTTCAGTCCAGTATGATATCAACCTGGTAGAGACGAGCAGTACCAGTGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000567936.5
ENST00000568073.5
3UTR CAA 90 bp AGCAGTTGCCGATGGACTGATGCACATTACAGAAGCACACACACCTaGCAGCAGAATGGATTATGGTTCATGATACGAGTTACACAAGCG +
Preference number: 2 (lower is better)
Translates to: SSCRWTDAHYRSTHT*QQNGLWFMIRVTQA
Trigger: CGCTTGTGTAACTCGTATCATGAACCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCTGTAATGTGCATCAGTCCATCGGCAACTGCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR CAA 90 bp TGCCTCTGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTaGAACCAATGTGACTTCGAATTATACTGGTATCACCCCCTACTT +
Preference number: 2 (lower is better)
Translates to: CLWLLQHISFLGRVM*NQCDFELYWYHPLL
Trigger: AAGTAGGGGGTGATACCAGTATAATTCGAAGTCACATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCAGAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
3UTR-3UTR TCA 90 bp AAGTTAGTAAAGACTGGTTGCCAGAGGTTCAGTGGGAGAGAGGGAGGGGTAAATTCGTCTCTACCAGGTTaGTATCATACTGGACTGAAC +
Preference number: 2 (lower is better)
Translates to: KLVKTGCQRFSGREGGVNSSLPG*YHTGLN
Trigger: GTTCAGTCCAGTATGATATCAACCTGGTAGAGACGA...ATTTACCCCTCCCTCTCTCCCACTGAACCTCTGGCAACCAGTCTTTACTAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000472094.5
3UTR-3UTR TCA 90 bp CTGATGCACATTACAGAAGCACACACACCTTGCAGCAGAATGGATTATGGTTCACTTCAGTGTTGTTCATaGCTGTGGTGGGCACTGGTA +
Preference number: 2 (lower is better)
Translates to: LMHITEAHTPCSRMDYGSLQCCS*LWWALV
Trigger: TACCAGTGCCCACCACAGTCATGAACAACACTGAAG...TGAACCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCTGTAATGTGCATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR-3UTR TCA 90 bp CTGGTACTGCTCGTCTCTACCAGGTTGATATCATACTGGACTGAACTGGCTCTCATGGATTATGGTTCATaGTACGAGTTACACAAGCGT +
Preference number: 2 (lower is better)
Translates to: LVLLVSTRLISYWTELALMDYGS*YELHKR
Trigger: ACGCTTGTGTAACTCGTATCATGAACCATAATCCAT...GAGAGCCAGTTCAGTCCAGTATGATATCAACCTGGTAGAGACGAGCAGTACCAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR-3UTR TCA 90 bp CATTCTGGAGAAAGCAAAGTTAGTAAAGACTGGTTGCCAGAGGTTCAGTGGGAGACACTAGTGACCCACTaGATTCACAGCACTTACACT +
Preference number: 2 (lower is better)
Translates to: HSGESKVSKDWLPEVQWETLVTH*IHSTYT
Trigger: AGTGTAAGTGCTGTGAATTCAGTGGGTCACTAGTGT...CTCCCACTGAACCTCTGGCAACCAGTCTTTACTAACTTTGCTTTCTCCAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
3UTR-3UTR GCA 90 bp CTGATGCACATTACAGAAGCACACACACCTTGCAGCAGAATGGATTATGGTTCAAGGTGTGTGAACATTTaGCTCTGGTTGCTTCAGCAC +
Preference number: 2 (lower is better)
Translates to: LMHITEAHTPCSRMDYGSRCVNI*LWLLQH
Trigger: GTGCTGAAGCAACCAGAGGCAAATGTTCACACACCT...TGAACCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCTGTAATGTGCATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR-3UTR GCA 90 bp AACCTCTTCACAACGAGCTCCTGTATAGTTTTCAACGCACCTTCCCAGGCTTCAGCAGGGAAAATCTCATaGCCAACTTGGAATAAGACA +
Preference number: 2 (lower is better)
Translates to: NLFTTSSCIVFNAPSQASAGKIS*PTWNKT
Trigger: TGTCTTATTCCAAGTTGGGCATGAGATTTTCCCTGC...TGAAGCCTGGGAAGGTGCGTTGAAAACTATACAGGAGCTCGTTGTGAAGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000498750.5
ENST00000562114.5
ENST00000565661.5
ENST00000567126.5
ENST00000567936.5
ENST00000568073.5
3UTR-3UTR GCA 90 bp GATGCACATTACAGAAGCACACACACCTTGCAGCAGAATGGATTATGGTTCATGGAAAGTGGCCTTTCCTaGAAAGGAAGTAGAAGGCTC +
Preference number: 2 (lower is better)
Translates to: DAHYRSTHTLQQNGLWFMESGLS*KGSRRL
Trigger: GAGCCTTCTACTTCCTTTGCAGGAAAGGCCACTTTC...CATGAACCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCTGTAATGTGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
3UTR-3UTR CCA 90 bp TGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGTGACCACCTTGCAGCAGAATaGATTATGGTTCATGATACG +
Preference number: 2 (lower is better)
Translates to: WLLQHISFLGRVMLNQCDHLAAE*IMVHDT
Trigger: CGTATCATGAACCATAATCCATTCTGCTGCAAGGTG...GTCACATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR-3UTR CCA 90 bp CAGCTAGGACTACATGCATGTGTTACCACACCTGCAAAGGAAGTAGAAGGCTCCATCTCATGCCCAACTTaGAATAAGACAAAGAGAAGC +
Preference number: 2 (lower is better)
Translates to: QLGLHACVTTPAKEVEGSISCPT*NKTKRS
Trigger: GCTTCTCTTTGTCTTATTCCAAGTTGGGCATGAGAT...GGAGCCTTCTACTTCCTTTGCAGGTGTGGTAACACATGCATGTAGTCCTAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498750.5
ENST00000565661.5
3UTR-3UTR CCA 90 bp CTGATGCACATTACAGAAGCACACACACCTTGCAGCAGAATGGATTATGGTTCACATACTGGACTGAACTaGCTCTCTGAAAGTGGCCTT +
Preference number: 2 (lower is better)
Translates to: LMHITEAHTPCSRMDYGSHTGLN*LSESGL
Trigger: AAGGCCACTTTCAGAGAGCCAGTTCAGTCCAGTATG...TGAACCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCTGTAATGTGCATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR-3UTR GCA 90 bp CTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGTGACTTCGAAGCAGGGAAAATCTCATaGCCAACTTGGAATAAGACA +
Preference number: 2 (lower is better)
Translates to: LQHISFLGRVMLNQCDFEAGKIS*PTWNKT
Trigger: TGTCTTATTCCAAGTTGGGCATGAGATTTTCCCTGC...TTCGAAGTCACATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
3UTR-3UTR CCA 90 bp AGCGGAGGCTTGAGGGTATATTTGTATACCAGTGTTCACTGCAGCATTATTCACCTTAGCAGTTGCCGATaGACTGATGCACATTACAGA +
Preference number: 2 (lower is better)
Translates to: SGGLRVYLYTSVHCSIIHLSSCR*TDAHYR
Trigger: TCTGTAATGTGCATCAGTCCATCGGCAACTGCTAAG...GTGAATAATGCTGCAGTGAACACTGGTATACAAATATACCCTCAAGCCTCCGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
3UTR-3UTR CCA 90 bp GATGCACATTACAGAAGCACACACACCTTGCAGCAGAATGGATTATGGTTCATGCTTAGCAGTTGCCGATaGACTGATGCACATTACAGA +
Preference number: 2 (lower is better)
Translates to: DAHYRSTHTLQQNGLWFMLSSCR*TDAHYR
Trigger: TCTGTAATGTGCATCAGTCCATCGGCAACTGCTAAG...CATGAACCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCTGTAATGTGCATC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR-3UTR CCA 90 bp TCAGTGTTGTTCATGACTGTGGTGGGCACTGGTACTGCTCGTCTCTACCAGGTTCTGTACATATGTGTGTaGTTTGAATTCTCCTTTAAG +
Preference number: 2 (lower is better)
Translates to: SVLFMTVVGTGTARLYQVLYICV*FEFSFK
Trigger: CTTAAAGGAGAATTCAAACCACACACATATGTACAG...AACCTGGTAGAGACGAGCAGTACCAGTGCCCACCACAGTCATGAACAACACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000565661.5
3UTR-3UTR CCA 90 bp ACATTACAGAAGCACACACACCTTGCAGCAGAATGGATTATGGTTCATGATACGCATACTGGACTGAACTaGCTCTCTGAAAGTGGCCTT +
Preference number: 2 (lower is better)
Translates to: TLQKHTHLAAEWIMVHDTHTGLN*LSESGL
Trigger: AAGGCCACTTTCAGAGAGCCAGTTCAGTCCAGTATG...CGTATCATGAACCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCTGTAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR-3UTR CCA 90 bp TTTTGTGTACTCTGTCTCAATGTCTTACCCTCATGTGTTTGTGAAATGAGTGAAGACTGTGGTGGGCACTaGTACTGCTCGTCTCTACCA +
Preference number: 2 (lower is better)
Translates to: FCVLCLNVLPSCVCEMSEDCGGH*YCSSLP
Trigger: TGGTAGAGACGAGCAGTACCAGTGCCCACCACAGTC...TTCACTCATTTCACAAACACATGAGGGTAAGACATTGAGACAGAGTACACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000472094.5
3UTR CAA 90 bp ATCAGTACTTGCAGCTTCTCAGATAACAGCAGGAATGAGGTGGTTTaGAAGCCACTAAGCCAGCTACTCCTTGCATTTAAAGGGTTTTCA +
Preference number: 2 (lower is better)
Translates to: ISTCSFSDNSRNEVV*KPLSQLLLAFKGFS
Trigger: TGAAAACCCTTTAAATGCAAGGAGTAGCTGGCTTAGTGGCTTCAAAACCACCTCATTCCTGCTGTTATCTGAGAAGCTGCAAGTACTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000565661.5
ENST00000568073.5
3UTR-3UTR GCA 90 bp CATTTGCCTCTGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAATTTTTCATCAGTACTTaGAGCTTCTCAGATAACAGC +
Preference number: 2 (lower is better)
Translates to: HLPLVASAHQLSGESHVEFFIST*SFSDNS
Trigger: GCTGTTATCTGAGAAGCTGCAAGTACTGATGAAAAA...TTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCAGAGGCAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000565661.5
ENST00000568073.5
3UTR-3UTR GCA 90 bp ATTTCTGGGTATATACACAAAATAATTGAAAGCGGAGGCTTGAGGGTATATTTGGTTAGGTTTGGCCGGTaGATGCCCTTCTGCCTAAGC +
Preference number: 2 (lower is better)
Translates to: ISGYIHKIIESGGLRVYLVRFGR*MPFCLS
Trigger: GCTTAGGCAGAAGGGCATGCACCGGCCAAACCTAAC...CAAATATACCCTCAAGCCTCCGCTTTCAATTATTTTGTGTATATACCCAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
3UTR-3UTR GCA 90 bp ACACACACCTTGCAGCAGAATGGATTATGGTTCATGATACGAGTTACACAAGCGGCAGGGAAAATCTCATaGCCAACTTGGAATAAGACA +
Preference number: 2 (lower is better)
Translates to: THTLQQNGLWFMIRVTQAAGKIS*PTWNKT
Trigger: TGTCTTATTCCAAGTTGGGCATGAGATTTTCCCTGC...CGCTTGTGTAACTCGTATCATGAACCATAATCCATTCTGCTGCAAGGTGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR-3UTR CCA 90 bp CTCTGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGTCAGCAGAATGGATTATaGTTCATGATACGAGTTACA +
Preference number: 2 (lower is better)
Translates to: LWLLQHISFLGRVMLNQCQQNGL*FMIRVT
Trigger: TGTAACTCGTATCATGAACCATAATCCATTCTGCTG...ACATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR-3UTR CCA 90 bp AGCGGAGGCTTGAGGGTATATTTGTATACCAGTGTTCACTGCAGCATTATTCACCACCTTGCAGCAGAATaGATTATGGTTCATGATACG +
Preference number: 2 (lower is better)
Translates to: SGGLRVYLYTSVHCSIIHHLAAE*IMVHDT
Trigger: CGTATCATGAACCATAATCCATTCTGCTGCAAGGTG...GTGAATAATGCTGCAGTGAACACTGGTATACAAATATACCCTCAAGCCTCCGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
3UTR-3UTR CCA 90 bp TCAAACAGGTTACTTTTAGTTTGGATGCTGGAGCCTGGGAGAAAAACCTCTTCACTTAGCAGTTGCCGATaGACTGATGCACATTACAGA +
Preference number: 2 (lower is better)
Translates to: SNRLLLVWMLEPGRKTSSLSSCR*TDAHYR
Trigger: TCTGTAATGTGCATCAGTCCATCGGCAACTGCTAAG...TGAAGAGGTTTTTCTCCCAGGCTCCAGCATCCAAACTAAAAGTAACCTGTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
3UTR-3UTR TCA 90 bp GTGGTTTTGAAGCCACTAAGCCAGCTACTCCTTGCATTTAAAGGGTTTTCATCCATGGATTATGGTTCATaGTACGAGTTACACAAGCGT +
Preference number: 2 (lower is better)
Translates to: VVLKPLSQLLLAFKGFSSMDYGS*YELHKR
Trigger: ACGCTTGTGTAACTCGTATCATGAACCATAATCCAT...GGATGAAAACCCTTTAAATGCAAGGAGTAGCTGGCTTAGTGGCTTCAAAACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR-3UTR TCA 90 bp ACACACACCTTGCAGCAGAATGGATTATGGTTCATGATACGAGTTACACAAGCGATGGATTATGGTTCATaGTACGAGTTACACAAGCGT +
Preference number: 2 (lower is better)
Translates to: THTLQQNGLWFMIRVTQAMDYGS*YELHKR
Trigger: ACGCTTGTGTAACTCGTATCATGAACCATAATCCAT...CGCTTGTGTAACTCGTATCATGAACCATAATCCATTCTGCTGCAAGGTGTGTGT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR-3UTR TCA 90 bp AGCTTTCTGGGGAGAGTCATGTTGAACCAATGTGACTTCGAATTATACTGGTATTGGGGAGAGTCATGTTaGACCAATGTGACTTCGAAT +
Preference number: 2 (lower is better)
Translates to: SFLGRVMLNQCDFELYWYWGESC*TNVTSN
Trigger: ATTCGAAGTCACATTGGTTCAACATGACTCTCCCCA...ATACCAGTATAATTCGAAGTCACATTGGTTCAACATGACTCTCCCCAGAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
3UTR-3UTR GCA 90 bp AGCTTTCTGGGGAGAGTCATGTTGAACCAATGTGACTTCGAATTATACTGGTATACATTTGCCTCTGGTTaGTTCAGCACATCAGCTTTC +
Preference number: 2 (lower is better)
Translates to: SFLGRVMLNQCDFELYWYTFASG*FSTSAF
Trigger: GAAAGCTGATGTGCTGAAGCAACCAGAGGCAAATGT...ATACCAGTATAATTCGAAGTCACATTGGTTCAACATGACTCTCCCCAGAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
3UTR-3UTR TCA 90 bp GCACATTACAGAAGCACACACACCTTGCAGCAGAATGGATTATGGTTCATGATAATGGATTATGGTTCATaGTACGAGTTACACAAGCGT +
Preference number: 2 (lower is better)
Translates to: AHYRSTHTLQQNGLWFMIMDYGS*YELHKR
Trigger: ACGCTTGTGTAACTCGTATCATGAACCATAATCCAT...TATCATGAACCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCTGTAATGTGC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR-3UTR GCA 90 bp CTTCCTTTGAGAGACAGATCCTTGAAATCAGTCACTTCTAGTAGAAAGCATTTTGAAAGTGGCCTTTCCTaGAAAGGAAGTAGAAGGCTC +
Preference number: 2 (lower is better)
Translates to: LPLRDRSLKSVTSSRKHFESGLS*KGSRRL
Trigger: GAGCCTTCTACTTCCTTTGCAGGAAAGGCCACTTTC...AAAATGCTTTCTACTAGAAGTGACTGATTTCAAGGATCTGTCTCTCAAAGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000568073.5
3UTR-3UTR CCA 90 bp ACACACACCTTGCAGCAGAATGGATTATGGTTCATGATACGAGTTACACAAGCGCAGCAGAATGGATTATaGTTCATGATACGAGTTACA +
Preference number: 2 (lower is better)
Translates to: THTLQQNGLWFMIRVTQAQQNGL*FMIRVT
Trigger: TGTAACTCGTATCATGAACCATAATCCATTCTGCTG...CGCTTGTGTAACTCGTATCATGAACCATAATCCATTCTGCTGCAAGGTGTGTGT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR-3UTR CCA 90 bp GATTTGGTTCACTTTGACGTTTCTTCAGTGTTGTTCATGACTGTGGTGGGCACTCAGCAGAATGGATTATaGTTCATGATACGAGTTACA +
Preference number: 2 (lower is better)
Translates to: DLVHFDVSSVLFMTVVGTQQNGL*FMIRVT
Trigger: TGTAACTCGTATCATGAACCATAATCCATTCTGCTG...AGTGCCCACCACAGTCATGAACAACACTGAAGAAACGTCAAAGTGAACCAAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR-3UTR CCA 90 bp CTGATGCACATTACAGAAGCACACACACCTTGCAGCAGAATGGATTATGGTTCACAGCAGAATGGATTATaGTTCATGATACGAGTTACA +
Preference number: 2 (lower is better)
Translates to: LMHITEAHTPCSRMDYGSQQNGL*FMIRVT
Trigger: TGTAACTCGTATCATGAACCATAATCCATTCTGCTG...TGAACCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCTGTAATGTGCATCAG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR-3UTR CCA 90 bp CATGCACTAAAAATTACAAGGGAAATAGGTTTGGAACTTTGTGACCTGTGTAGTCATACTGGACTGAACTaGCTCTCTGAAAGTGGCCTT +
Preference number: 2 (lower is better)
Translates to: HALKITREIGLELCDLCSHTGLN*LSESGL
Trigger: AAGGCCACTTTCAGAGAGCCAGTTCAGTCCAGTATG...ACTACACAGGTCACAAAGTTCCAAACCTATTTCCCTTGTAATTTTTAGTGCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000472094.5
3UTR-3UTR TCA 90 bp GAACTTTGTGACCTGTGTAGTACAATAACAATCCTAAATTTCCAGTTACTTGCATTCTCTCTAGGTGTGTaGACATTTGCCTCTGGTTGC +
Preference number: 2 (lower is better)
Translates to: ELCDLCSTITILNFQLLAFSLGV*TFASGC
Trigger: GCAACCAGAGGCAAATGTTCACACACCTAGAGAGAA...TGCAAGTAACTGGAAATTTAGGATTGTTATTGTACTACACAGGTCACAAAGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
3UTR-3UTR TCA 90 bp ACAATCCTAAATTTCCAGTTACTTGCACCTAGAATTAGTCAATCTTTTGCAGTCTTCTCTCTAGGTGTGTaGACATTTGCCTCTGGTTGC +
Preference number: 2 (lower is better)
Translates to: TILNFQLLAPRISQSFAVFSLGV*TFASGC
Trigger: GCAACCAGAGGCAAATGTTCACACACCTAGAGAGAA...GACTGCAAAAGATTGACTAATTCTAGGTGCAAGTAACTGGAAATTTAGGATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
3UTR-3UTR TCA 90 bp TTTCTTCCTTTGAGAGACAGATCCTTGAAATCAGTCACTTCTAGTAGAAAGCATTCGTCTCTACCAGGTTaGTATCATACTGGACTGAAC +
Preference number: 2 (lower is better)
Translates to: FLPLRDRSLKSVTSSRKHSSLPG*YHTGLN
Trigger: GTTCAGTCCAGTATGATATCAACCTGGTAGAGACGA...ATGCTTTCTACTAGAAGTGACTGATTTCAAGGATCTGTCTCTCAAAGGAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000568073.5
3UTR-3UTR TCA 90 bp TTTTCATTTTGTGTACTCTGTCTCAATGTCTTACCCTCATGTGTTTGTGAAATGTGGGGAGAGTCATGTTaGACCAATGTGACTTCGAAT +
Preference number: 2 (lower is better)
Translates to: FSFCVLCLNVLPSCVCEMWGESC*TNVTSN
Trigger: ATTCGAAGTCACATTGGTTCAACATGACTCTCCCCA...CATTTCACAAACACATGAGGGTAAGACATTGAGACAGAGTACACAAAATGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
3UTR-3UTR GCA 90 bp ATTTCTGGGTATATACACAAAATAATTGAAAGCGGAGGCTTGAGGGTATATTTGTTAGTAAAGACTGGTTaGCAGAGGTTCAGTGGGAGA +
Preference number: 2 (lower is better)
Translates to: ISGYIHKIIESGGLRVYLLVKTG*QRFSGR
Trigger: TCTCCCACTGAACCTCTGGCAACCAGTCTTTACTAA...CAAATATACCCTCAAGCCTCCGCTTTCAATTATTTTGTGTATATACCCAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
3UTR-3UTR CCA 90 bp TTTCTTCCTTTGAGAGACAGATCCTTGAAATCAGTCACTTCTAGTAGAAAGCATATCTCATGCCCAACTTaGAATAAGACAAAGAGAAGC +
Preference number: 2 (lower is better)
Translates to: FLPLRDRSLKSVTSSRKHISCPT*NKTKRS
Trigger: GCTTCTCTTTGTCTTATTCCAAGTTGGGCATGAGAT...ATGCTTTCTACTAGAAGTGACTGATTTCAAGGATCTGTCTCTCAAAGGAAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000568073.5
3UTR-3UTR TCA 90 bp TTTTCATTTTGTGTACTCTGTCTCAATGTCTTACCCTCATGTGTTTGTGAAATGATGGATTATGGTTCATaGTACGAGTTACACAAGCGT +
Preference number: 2 (lower is better)
Translates to: FSFCVLCLNVLPSCVCEMMDYGS*YELHKR
Trigger: ACGCTTGTGTAACTCGTATCATGAACCATAATCCAT...CATTTCACAAACACATGAGGGTAAGACATTGAGACAGAGTACACAAAATGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
3UTR-3UTR CCA 90 bp GAACTTTGTGACCTGTGTAGTACAATAACAATCCTAAATTTCCAGTTACTTGCAATCTCATGCCCAACTTaGAATAAGACAAAGAGAAGC +
Preference number: 2 (lower is better)
Translates to: ELCDLCSTITILNFQLLAISCPT*NKTKRS
Trigger: GCTTCTCTTTGTCTTATTCCAAGTTGGGCATGAGAT...TGCAAGTAACTGGAAATTTAGGATTGTTATTGTACTACACAGGTCACAAAGTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000472094.5
3UTR-3UTR CCA 90 bp ATTTCTGGGTATATACACAAAATAATTGAAAGCGGAGGCTTGAGGGTATATTTGCTACATACTACATCATaGATGAACCTTTCAGACATT +
Preference number: 2 (lower is better)
Translates to: ISGYIHKIIESGGLRVYLLHTTS*MNLSDI
Trigger: AATGTCTGAAAGGTTCATCCATGATGTAGTATGTAG...CAAATATACCCTCAAGCCTCCGCTTTCAATTATTTTGTGTATATACCCAGAAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
3UTR-3UTR CCA 90 bp ACAATCCTAAATTTCCAGTTACTTGCACCTAGAATTAGTCAATCTTTTGCAGTCCTGTACATATGTGTGTaGTTTGAATTCTCCTTTAAG +
Preference number: 2 (lower is better)
Translates to: TILNFQLLAPRISQSFAVLYICV*FEFSFK
Trigger: CTTAAAGGAGAATTCAAACCACACACATATGTACAG...GACTGCAAAAGATTGACTAATTCTAGGTGCAAGTAACTGGAAATTTAGGATTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461391.5
3UTR GCA 72 bp AGACAGGCTGTTAGGTTTGGCCGGTGCATGCCCTTCTaGCTAAGCCATTTACCAGCCCCAGACCTTTCCACT +
Preference number: 3 (lower is better)
Translates to: RQAVRFGRCMPF*LSHLPAPDLST
Trigger: AGTGGAAAGGTCTGGGGCTGGTAAATGGCTTAGGCAGAAGGGCATGCACCGGCCAAACCTAACAGCCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
3UTR-3UTR CAA 90 bp GTTAGGTTTGGCCGGTGCATGCCCTTCTGCCTAAGCCATTTACCAGCCCCAGACAACATTTGCCTCTGGTaGCTTCAGCACATCAGCTTT +
Preference number: 3 (lower is better)
Translates to: VRFGRCMPFCLSHLPAPDNICLW*LQHISF
Trigger: AAAGCTGATGTGCTGAAGCAACCAGAGGCAAATGTT...GTCTGGGGCTGGTAAATGGCTTAGGCAGAAGGGCATGCACCGGCCAAACCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
3UTR TCA 72 bp ACCAGGTTGATATCATACTGGACTGAACTGGCTCTCTaGAAGTGGCCTTTCCCAGGCAGGAGTGCAGTAGTG +
Preference number: 3 (lower is better)
Translates to: TRLISYWTELAL*KWPFPGRSAVV
Trigger: CACTACTGCACTCCTGCCTGGGAAAGGCCACTTTCAGAGAGCCAGTTCAGTCCAGTATGATATCAACCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563204.5
ENST00000565661.5
3UTR TCA 72 bp TGTGGTGGGCACTGGTACTGCTCGTCTCTACCAGGTTaGTATCATACTGGACTGAACTGGCTCTCTGAAAGT +
Preference number: 3 (lower is better)
Translates to: CGGHWYCSSLPG*YHTGLNWLSES
Trigger: ACTTTCAGAGAGCCAGTTCAGTCCAGTATGATATCAACCTGGTAGAGACGAGCAGTACCAGTGCCCACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000563204.5
ENST00000565661.5
ENST00000567936.5
ENST00000568073.5
3UTR-3UTR CAA 90 bp GCAGTTGCCGATGGACTGATGCACATTACAGAAGCACACACACCTTGCAGCAGACTCGTCTCTACCAGGTaGATATCATACTGGACTGAA +
Preference number: 3 (lower is better)
Translates to: AVADGLMHITEAHTPCSRLVSTR*ISYWTE
Trigger: TTCAGTCCAGTATGATATCAACCTGGTAGAGACGAG...TCTGCTGCAAGGTGTGTGTGCTTCTGTAATGTGCATCAGTCCATCGGCAACTGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR-3UTR CAA 90 bp CTCTGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGTAGAAGCACACACACCTaGCAGCAGAATGGATTATGG +
Preference number: 3 (lower is better)
Translates to: LWLLQHISFLGRVMLNQCRSTHT*QQNGLW
Trigger: CCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCT...ACATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR-3UTR CAA 90 bp ATTTGCCTCTGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACAGAAGCACACACACCTaGCAGCAGAATGGATTATGG +
Preference number: 3 (lower is better)
Translates to: ICLWLLQHISFLGRVMLNRSTHT*QQNGLW
Trigger: CCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCT...GTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCAGAGGCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR-3UTR CAA 90 bp TGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGTGACAGAAGCACACACACCTaGCAGCAGAATGGATTATGG +
Preference number: 3 (lower is better)
Translates to: WLLQHISFLGRVMLNQCDRSTHT*QQNGLW
Trigger: CCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCT...GTCACATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR-3UTR CAA 90 bp GTGGTTTTGAAGCCACTAAGCCAGCTACTCCTTGCATTTAAAGGGTTTTCATCCGACGTTTCTTCAGTGTaGTTCATGACTGTGGTGGGC +
Preference number: 3 (lower is better)
Translates to: VVLKPLSQLLLAFKGFSSDVSSV*FMTVVG
Trigger: GCCCACCACAGTCATGAACAACACTGAAGAAACGTC...GGATGAAAACCCTTTAAATGCAAGGAGTAGCTGGCTTAGTGGCTTCAAAACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
3UTR TCA 72 bp TGGGTGATGAATGAATTGGTGACACTAGTGACCCACTaGATTCACAGCACTTACACTGGGCCAGACTGTGTA +
Preference number: 3 (lower is better)
Translates to: WVMNELVTLVTH*IHSTYTGPDCV
Trigger: TACACAGTCTGGCCCAGTGTAAGTGCTGTGAATTCAGTGGGTCACTAGTGTCACCAATTCATTCATCACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
3UTR GCA 72 bp GACATTCTGGAGAAAGCAAAGTTAGTAAAGACTGGTTaGCAGAGGTTCAGTGGGAGAGAGGGAGGGGTAAAT +
Preference number: 3 (lower is better)
Translates to: DILEKAKLVKTG*QRFSGREGGVN
Trigger: ATTTACCCCTCCCTCTCTCCCACTGAACCTCTGGCAACCAGTCTTTACTAACTTTGCTTTCTCCAGAATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
3UTR CCA 72 bp TTATACTGGTATCACCCCCTACTTAGCAGTTGCCGATaGACTGATGCACATTACAGAAGCACACACACCTTG +
Preference number: 3 (lower is better)
Translates to: LYWYHPLLSSCR*TDAHYRSTHTL
Trigger: CAAGGTGTGTGTGCTTCTGTAATGTGCATCAGTCCATCGGCAACTGCTAAGTAGGGGGTGATACCAGTATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR-3UTR CAA 90 bp GGGAGAGTCATGTTGAACCAATGTGACTTCGAATTATACTGGTATCACCCCCTAAGAAGCACACACACCTaGCAGCAGAATGGATTATGG +
Preference number: 3 (lower is better)
Translates to: GRVMLNQCDFELYWYHPLRSTHT*QQNGLW
Trigger: CCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCT...TAGGGGGTGATACCAGTATAATTCGAAGTCACATTGGTTCAACATGACTCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR-3UTR CAA 90 bp ACATTACAGAAGCACACACACCTTGCAGCAGAATGGATTATGGTTCATGATACGGACGTTTCTTCAGTGTaGTTCATGACTGTGGTGGGC +
Preference number: 3 (lower is better)
Translates to: TLQKHTHLAAEWIMVHDTDVSSV*FMTVVG
Trigger: GCCCACCACAGTCATGAACAACACTGAAGAAACGTC...CGTATCATGAACCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCTGTAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR-3UTR CAA 90 bp ATTTGCCTCTGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACTTGAGAGACAGATCCTaGAAATCAGTCACTTCTAGT +
Preference number: 3 (lower is better)
Translates to: ICLWLLQHISFLGRVMLNLRDRS*KSVTSS
Trigger: ACTAGAAGTGACTGATTTCAAGGATCTGTCTCTCAA...GTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCAGAGGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000568073.5
3UTR-3UTR CAA 90 bp GCCTGGGAGAAAAACCTCTTCACAACGAGCTCCTGTATAGTTTTCAACGCACCTACATATGTGTGTGGTTaGAATTCTCCTTTAAGCCAG +
Preference number: 3 (lower is better)
Translates to: AWEKNLFTTSSCIVFNAPTYVCG*NSPLSQ
Trigger: CTGGCTTAAAGGAGAATTCAAACCACACACATATGT...AGGTGCGTTGAAAACTATACAGGAGCTCGTTGTGAAGAGGTTTTTCTCCCAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000565661.5
3UTR-3UTR CAA 90 bp TGGAGCCTGGGAGAAAAACCTCTTCACAACGAGCTCCTGTATAGTTTTCAACGCACATATGTGTGTGGTTaGAATTCTCCTTTAAGCCAG +
Preference number: 3 (lower is better)
Translates to: WSLGEKPLHNELLYSFQRTYVCG*NSPLSQ
Trigger: CTGGCTTAAAGGAGAATTCAAACCACACACATATGT...GCGTTGAAAACTATACAGGAGCTCGTTGTGAAGAGGTTTTTCTCCCAGGCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000565661.5
3UTR-3UTR CAA 90 bp GTGGTTTTGAAGCCACTAAGCCAGCTACTCCTTGCATTTAAAGGGTTTTCATCCCTCGTCTCTACCAGGTaGATATCATACTGGACTGAA +
Preference number: 3 (lower is better)
Translates to: VVLKPLSQLLLAFKGFSSLVSTR*ISYWTE
Trigger: TTCAGTCCAGTATGATATCAACCTGGTAGAGACGAG...GGATGAAAACCCTTTAAATGCAAGGAGTAGCTGGCTTAGTGGCTTCAAAACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
3UTR TCA 72 bp TGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTaGACCAATGTGACTTCGAATTATACTGGTATCACC +
Preference number: 3 (lower is better)
Translates to: CFSTSAFWGESC*TNVTSNYTGIT
Trigger: GGTGATACCAGTATAATTCGAAGTCACATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
3UTR CCA 72 bp AGAGTCATGTTGAACCAATGTGACTTCGAATTATACTaGTATCACCCCCTACTTAGCAGTTGCCGATGGACT +
Preference number: 3 (lower is better)
Translates to: RVMLNQCDFELY*YHPLLSSCRWT
Trigger: AGTCCATCGGCAACTGCTAAGTAGGGGGTGATACCAGTATAATTCGAAGTCACATTGGTTCAACATGACTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
3UTR CCA 72 bp TGCACATTACAGAAGCACACACACCTTGCAGCAGAATaGATTATGGTTCATGATACGAGTTACACAAGCGTT +
Preference number: 3 (lower is better)
Translates to: CTLQKHTHLAAE*IMVHDTSYTSV
Trigger: AACGCTTGTGTAACTCGTATCATGAACCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCTGTAATGTGCA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR-3UTR CAA 90 bp AGCTTTCTGGGGAGAGTCATGTTGAACCAATGTGACTTCGAATTATACTGGTATCTCGTCTCTACCAGGTaGATATCATACTGGACTGAA +
Preference number: 3 (lower is better)
Translates to: SFLGRVMLNQCDFELYWYLVSTR*ISYWTE
Trigger: TTCAGTCCAGTATGATATCAACCTGGTAGAGACGAG...ATACCAGTATAATTCGAAGTCACATTGGTTCAACATGACTCTCCCCAGAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
3UTR-3UTR CAA 90 bp CTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGTGACTTCGAAATGATTTGGTTCACTTaGACGTTTCTTCAGTGTTGT +
Preference number: 3 (lower is better)
Translates to: LQHISFLGRVMLNQCDFEMIWFT*TFLQCC
Trigger: ACAACACTGAAGAAACGTCAAAGTGAACCAAATCAT...TTCGAAGTCACATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
3UTR-3UTR CAA 90 bp ATTTCTGGGTATATACACAAAATAATTGAAAGCGGAGGCTTGAGGGTATATTTGTGGGTGATGAATGAATaGGTGACACTAGTGACCCAC +
Preference number: 3 (lower is better)
Translates to: ISGYIHKIIESGGLRVYLWVMNE*VTLVTH
Trigger: GTGGGTCACTAGTGTCACCAATTCATTCATCACCCA...CAAATATACCCTCAAGCCTCCGCTTTCAATTATTTTGTGTATATACCCAGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
3UTR-3UTR CAA 90 bp GAACTTTGTGACCTGTGTAGTACAATAACAATCCTAAATTTCCAGTTACTTGCACTCGTCTCTACCAGGTaGATATCATACTGGACTGAA +
Preference number: 3 (lower is better)
Translates to: ELCDLCSTITILNFQLLALVSTR*ISYWTE
Trigger: TTCAGTCCAGTATGATATCAACCTGGTAGAGACGAG...TGCAAGTAACTGGAAATTTAGGATTGTTATTGTACTACACAGGTCACAAAGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000472094.5
3UTR TCA 72 bp TATGTGTGTGGTTTGAATTCTCCTTTAAGCCAGTTGTaGCATCTATTGGTTCCCTCATTAATCAGTTCCTCA +
Preference number: 3 (lower is better)
Translates to: YVCGLNSPLSQL*HLLVPSLISSS
Trigger: TGAGGAACTGATTAATGAGGGAACCAATAGATGTCACAACTGGCTTAAAGGAGAATTCAAACCACACACATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000565661.5
3UTR CCA 72 bp TACAGAAGCACACACACCTTGCAGCAGAATGGATTATaGTTCATGATACGAGTTACACAAGCGTTTTATTTA +
Preference number: 3 (lower is better)
Translates to: YRSTHTLQQNGL*FMIRVTQAFYL
Trigger: TAAATAAAACGCTTGTGTAACTCGTATCATGAACCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR CCA 72 bp GATCATGAAAAAGTTCCGGAGGTGCATAGTGGTGACTaGTACATACAACGAATGTATTTAATGCCTTTAAAC +
Preference number: 3 (lower is better)
Translates to: DHEKVPEVHSGD*YIQRMYLMPLN
Trigger: GTTTAAAGGCATTAAATACATTCGTTGTATGTACCAGTCACCACTATGCACCTCCGGAACTTTTTCATGATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
3UTR-3UTR CAA 90 bp TTTCTTCCTTTGAGAGACAGATCCTTGAAATCAGTCACTTCTAGTAGAAAGCATTTGAGAGACAGATCCTaGAAATCAGTCACTTCTAGT +
Preference number: 3 (lower is better)
Translates to: FLPLRDRSLKSVTSSRKHLRDRS*KSVTSS
Trigger: ACTAGAAGTGACTGATTTCAAGGATCTGTCTCTCAA...ATGCTTTCTACTAGAAGTGACTGATTTCAAGGATCTGTCTCTCAAAGGAAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000568073.5
3UTR TCA 72 bp CAGCAATTGCATTTCTGGGTATATACACAAAATAATTaGAAGCGGAGGCTTGAGGGTATATTTGTATACCAG +
Preference number: 3 (lower is better)
Translates to: QQLHFWVYTQNN*KRRLEGIFVYQ
Trigger: CTGGTATACAAATATACCCTCAAGCCTCCGCTTTCAATTATTTTGTGTATATACCCAGAAATGCAATTGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
3UTR-3UTR CAA 90 bp GAACTTTGTGACCTGTGTAGTACAATAACAATCCTAAATTTCCAGTTACTTGCATTGAGAGACAGATCCTaGAAATCAGTCACTTCTAGT +
Preference number: 3 (lower is better)
Translates to: ELCDLCSTITILNFQLLALRDRS*KSVTSS
Trigger: ACTAGAAGTGACTGATTTCAAGGATCTGTCTCTCAA...TGCAAGTAACTGGAAATTTAGGATTGTTATTGTACTACACAGGTCACAAAGTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
3UTR TCA 72 bp TCAGTCACTTCTAGTAGAAAGCATTTTCATCAATATTaGAAGAATGATACAGAGGTATCTATCAGTCAGCGC +
Preference number: 3 (lower is better)
Translates to: SVTSSRKHFHQY*KNDTEVSISQR
Trigger: GCGCTGACTGATAGATACCTCTGTATCATTCTTTCAATATTGATGAAAATGCTTTCTACTAGAAGTGACTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000568073.5
3UTR GCA 72 bp ATTGGAACTCTTATTACTGATGGAAATATAGTGGTATaGAGCTGCTGTAGAAAACAGTATGGTGATTTTCCA +
Preference number: 3 (lower is better)
Translates to: IGTLITDGNIVV*SCCRKQYGDFP
Trigger: TGGAAAATCACCATACTGTTTTCTACAGCAGCTGCATACCACTATATTTCCATCAGTAATAAGAGTTCCAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
CDS-3UTR CCA 90 bp TGGTGGGCACTGGTACTGCTCGTCTCTACCAGGTTGATATCATACTGGACTGAAGAAGCCCGCTCTGCGTaGCAGCCCCGGAGACAGCCG +
Preference number: 4 (lower is better)
Translates to: WWALVLLVSTRLISYWTEEARSA*QPRRQP
Trigger: CGGCTGTCTCCGGGGCTGCCACGCAGAGCGGGCTTC...TTCAGTCCAGTATGATATCAACCTGGTAGAGACGAGCAGTACCAGTGCCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565661.5
CDS-3UTR CCA 90 bp GTTTTCAACGCACCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGAGAAGCCCGCTCTGCGTaGCAGCCCCGGAGACAGCCG +
Preference number: 4 (lower is better)
Translates to: VFNAPSQASGLNNLLMQGEARSA*QPRRQP
Trigger: CGGCTGTCTCCGGGGCTGCCACGCAGAGCGGGCTTC...TCCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGGTGCGTTGAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565661.5
ENST00000567126.5
CDS-3UTR GCA 90 bp CTCTTCACAACGAGCTCCTGTATAGTTTTCAACGCACCTTCCCAGGCTTCAGGTCCACGAAGCCCGCTCTaGGTGGCAGCCCCGGAGACA +
Preference number: 4 (lower is better)
Translates to: LFTTSSCIVFNAPSQASGPRSPL*VAAPET
Trigger: TGTCTCCGGGGCTGCCACGCAGAGCGGGCTTCGTGG...ACCTGAAGCCTGGGAAGGTGCGTTGAAAACTATACAGGAGCTCGTTGTGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565661.5
ENST00000567126.5
CDS-3UTR GCA 90 bp CACATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGTGACTTCGAATTATACCCACGAAGCCCGCTCTaGGTGGCAGCCCCGGAGACA +
Preference number: 4 (lower is better)
Translates to: HISFLGRVMLNQCDFELYPRSPL*VAAPET
Trigger: TGTCTCCGGGGCTGCCACGCAGAGCGGGCTTCGTGG...GTATAATTCGAAGTCACATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565661.5
CDS-3UTR CCA 90 bp GGCAGGAGTGCAGTAGTGCAGTCATGGCTTAACTGCAGCCTCTCATTCCTGGGCCATACTGGACTGAACTaGCTCTCTGAAAGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: GRSAVVQSWLNCSLSFLGHTGLN*LSESGL
Trigger: AAGGCCACTTTCAGAGAGCCAGTTCAGTCCAGTATG...GCCCAGGAATGAGAGGCTGCAGTTAAGCCATGACTGCACTACTGCACTCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563204.5
ENST00000565661.5
CDS-3UTR TCA 90 bp TGGTGGGCACTGGTACTGCTCGTCTCTACCAGGTTGATATCATACTGGACTGAAACTGAACTGGCTCTCTaGAAGTGGCCTTTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: WWALVLLVSTRLISYWTETELAL*KWPFPG
Trigger: GCCTGGGAAAGGCCACTTTCAGAGAGCCAGTTCAGT...TTCAGTCCAGTATGATATCAACCTGGTAGAGACGAGCAGTACCAGTGCCCACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563204.5
ENST00000565661.5
CDS-3UTR GCA 90 bp GCTGTTAGGTTTGGCCGGTGCATGCCCTTCTGCCTAAGCCATTTACCAGCCCCAACATTTGCCTCTGGTTaGTTCAGCACATCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: AVRFGRCMPFCLSHLPAPTFASG*FSTSAF
Trigger: GAAAGCTGATGTGCTGAAGCAACCAGAGGCAAATGT...TGGGGCTGGTAAATGGCTTAGGCAGAAGGGCATGCACCGGCCAAACCTAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR GCA 90 bp TGGGCACTGGTACTGCTCGTCTCTACCAGGTTGATATCATACTGGACTGAACTGGTTAGGTTTGGCCGGTaGATGCCCTTCTGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: WALVLLVSTRLISYWTELVRFGR*MPFCLS
Trigger: GCTTAGGCAGAAGGGCATGCACCGGCCAAACCTAAC...CAGTTCAGTCCAGTATGATATCAACCTGGTAGAGACGAGCAGTACCAGTGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000472094.5
CDS-3UTR GCA 90 bp TGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGTGACGTAGAGAAGCCAGCGTaGATCCCAGCCTTGACGAGG +
Preference number: 4 (lower is better)
Translates to: WLLQHISFLGRVMLNQCDVEKPA*IPALTR
Trigger: CCTCGTCAAGGCTGGGATGCACGCTGGCTTCTCTAC...GTCACATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR CCA 90 bp TGCATGCCCTTCTGCCTAAGCCATTTACCAGCCCCAGACCTTTCCACTGCTCCAGTGAACATTTGCCTCTaGTTGCTTCAGCACATCAGC +
Preference number: 4 (lower is better)
Translates to: CMPFCLSHLPAPDLSTAPVNICL*LLQHIS
Trigger: GCTGATGTGCTGAAGCAACCAGAGGCAAATGTTCAC...TGGAGCAGTGGAAAGGTCTGGGGCTGGTAAATGGCTTAGGCAGAAGGGCATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR TCA 90 bp AAGTTAGTAAAGACTGGTTGCCAGAGGTTCAGTGGGAGAGAGGGAGGGGTAAATAGGCAAAACGACTTGTaGCTGGGACCACAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: KLVKTGCQRFSGREGGVNRQNDL*LGPQGS
Trigger: AGAGCCCTGTGGTCCCAGTCACAAGTCGTTTTGCCT...ATTTACCCCTCCCTCTCTCCCACTGAACCTCTGGCAACCAGTCTTTACTAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR TCA 90 bp GTGTTGTTCATGACTGTGGTGGGCACTGGTACTGCTCGTCTCTACCAGGTTGATCTTCAGTGTTGTTCATaGCTGTGGTGGGCACTGGTA +
Preference number: 4 (lower is better)
Translates to: VLFMTVVGTGTARLYQVDLQCCS*LWWALV
Trigger: TACCAGTGCCCACCACAGTCATGAACAACACTGAAG...ATCAACCTGGTAGAGACGAGCAGTACCAGTGCCCACCACAGTCATGAACAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR TCA 90 bp GACCCACTGAATTCACAGCACTTACACTGGGCCAGACTGTGTAGAGAAGCCAGCTTCTCTCTAGGTGTGTaGACATTTGCCTCTGGTTGC +
Preference number: 4 (lower is better)
Translates to: DPLNSQHLHWARLCREASFSLGV*TFASGC
Trigger: GCAACCAGAGGCAAATGTTCACACACCTAGAGAGAA...GCTGGCTTCTCTACACAGTCTGGCCCAGTGTAAGTGCTGTGAATTCAGTGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR TCA 90 bp TGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGTGACCGTGCATCCCAGCCTTaGCGAGGACATAGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: WLLQHISFLGRVMLNQCDRASQP*RGHSSE
Trigger: CTCTGAACTATGTCCTCGTCAAGGCTGGGATGCACG...GTCACATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR TCA 90 bp GCCTGGGAGAAAAACCTCTTCACAACGAGCTCCTGTATAGTTTTCAACGCACCTCGTGCATCCCAGCCTTaGCGAGGACATAGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: AWEKNLFTTSSCIVFNAPRASQP*RGHSSE
Trigger: CTCTGAACTATGTCCTCGTCAAGGCTGGGATGCACG...AGGTGCGTTGAAAACTATACAGGAGCTCGTTGTGAAGAGGTTTTTCTCCCAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000472094.5
CDS-3UTR GCA 90 bp TTTAGTTTGGATGCTGGAGCCTGGGAGAAAAACCTCTTCACAACGAGCTCCTGTCGGTGCATGCCCTTCTaGCTAAGCCATTTACCAGCC +
Preference number: 4 (lower is better)
Translates to: FSLDAGAWEKNLFTTSSCRCMPF*LSHLPA
Trigger: GGCTGGTAAATGGCTTAGGCAGAAGGGCATGCACCG...ACAGGAGCTCGTTGTGAAGAGGTTTTTCTCCCAGGCTCCAGCATCCAAACTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000472094.5
CDS-3UTR GCA 90 bp ACCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCGTTAGGTTTGGCCGGTaGATGCCCTTCTGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: TFPGFRSQQPSNAGKISCVRFGR*MPFCLS
Trigger: GCTTAGGCAGAAGGGCATGCACCGGCCAAACCTAAC...GCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000472094.5
CDS-3UTR GCA 90 bp GACATTCTGGAGAAAGCAAAGTTAGTAAAGACTGGTTGCCAGAGGTTCAGTGGGGTAGAGAAGCCAGCGTaGATCCCAGCCTTGACGAGG +
Preference number: 4 (lower is better)
Translates to: DILEKAKLVKTGCQRFSGVEKPA*IPALTR
Trigger: CCTCGTCAAGGCTGGGATGCACGCTGGCTTCTCTAC...CCCACTGAACCTCTGGCAACCAGTCTTTACTAACTTTGCTTTCTCCAGAATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR CCA 90 bp AGCCTGGGAGAAAAACCTCTTCACAACGAGCTCCTGTATAGTTTTCAACGCACCGACTGTGGTGGGCACTaGTACTGCTCGTCTCTACCA +
Preference number: 4 (lower is better)
Translates to: SLGEKPLHNELLYSFQRTDCGGH*YCSSLP
Trigger: TGGTAGAGACGAGCAGTACCAGTGCCCACCACAGTC...GGTGCGTTGAAAACTATACAGGAGCTCGTTGTGAAGAGGTTTTTCTCCCAGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR CCA 90 bp TTCATGACTGTGGTGGGCACTGGTACTGCTCGTCTCTACCAGGTTGATATCATAGACTGTGGTGGGCACTaGTACTGCTCGTCTCTACCA +
Preference number: 4 (lower is better)
Translates to: FMTVVGTGTARLYQVDIIDCGGH*YCSSLP
Trigger: TGGTAGAGACGAGCAGTACCAGTGCCCACCACAGTC...TATGATATCAACCTGGTAGAGACGAGCAGTACCAGTGCCCACCACAGTCATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR CCA 90 bp ATTTGCCTCTGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACGACTGTGGTGGGCACTaGTACTGCTCGTCTCTACCA +
Preference number: 4 (lower is better)
Translates to: ICLWLLQHISFLGRVMLNDCGGH*YCSSLP
Trigger: TGGTAGAGACGAGCAGTACCAGTGCCCACCACAGTC...GTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCAGAGGCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR CCA 90 bp GTTAGGTTTGGCCGGTGCATGCCCTTCTGCCTAAGCCATTTACCAGCCCCAGACCACCTTGCAGCAGAATaGATTATGGTTCATGATACG +
Preference number: 4 (lower is better)
Translates to: VRFGRCMPFCLSHLPAPDHLAAE*IMVHDT
Trigger: CGTATCATGAACCATAATCCATTCTGCTGCAAGGTG...GTCTGGGGCTGGTAAATGGCTTAGGCAGAAGGGCATGCACCGGCCAAACCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR TCA 90 bp TGGGCACTGGTACTGCTCGTCTCTACCAGGTTGATATCATACTGGACTGAACTGACTGAACTGGCTCTCTaGAAGTGGCCTTTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: WALVLLVSTRLISYWTELTELAL*KWPFLQ
Trigger: TTGCAGGAAAGGCCACTTTCAGAGAGCCAGTTCAGT...CAGTTCAGTCCAGTATGATATCAACCTGGTAGAGACGAGCAGTACCAGTGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR TCA 90 bp CTTCACAACGAGCTCCTGTATAGTTTTCAACGCACCTTCCCAGGCTTCAGGTCTACTGAACTGGCTCTCTaGAAGTGGCCTTTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: LHNELLYSFQRTFPGFRSTELAL*KWPFLQ
Trigger: TTGCAGGAAAGGCCACTTTCAGAGAGCCAGTTCAGT...AGACCTGAAGCCTGGGAAGGTGCGTTGAAAACTATACAGGAGCTCGTTGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR GCA 90 bp CAGTCATGGCTTAACTGCAGCCTCTCATTCCTGGGCTCAAGCGATCTTCCCATCATGTGTTACCACACCTaGAAAGGAAGTAGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: QSWLNCSLSFLGSSDLPIMCYHT*KGSRRL
Trigger: GAGCCTTCTACTTCCTTTGCAGGTGTGGTAACACAT...GATGGGAAGATCGCTTGAGCCCAGGAATGAGAGGCTGCAGTTAAGCCATGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563204.5
ENST00000565661.5
CDS-3UTR GCA 90 bp TTGGATGCTGGAGCCTGGGAGAAAAACCTCTTCACAACGAGCTCCTGTATAGTTTTTCCCAGGCAGGAGTaGAGTAGTGCAGTCATGGCT +
Preference number: 4 (lower is better)
Translates to: LDAGAWEKNLFTTSSCIVFPRQE*SSAVMA
Trigger: AGCCATGACTGCACTACTGCACTCCTGCCTGGGAAA...AACTATACAGGAGCTCGTTGTGAAGAGGTTTTTCTCCCAGGCTCCAGCATCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000565661.5
CDS-3UTR CCA 90 bp TCAGTGTTGTTCATGACTGTGGTGGGCACTGGTACTGCTCGTCTCTACCAGGTTCATACTGGACTGAACTaGCTCTCTGAAAGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: SVLFMTVVGTGTARLYQVHTGLN*LSESGL
Trigger: AAGGCCACTTTCAGAGAGCCAGTTCAGTCCAGTATG...AACCTGGTAGAGACGAGCAGTACCAGTGCCCACCACAGTCATGAACAACACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR CCA 90 bp AAGTTAGTAAAGACTGGTTGCCAGAGGTTCAGTGGGAGAGAGGGAGGGGTAAATTTGCCAGAGGTTCAGTaGGAGAGAGGGAGGGGTAAA +
Preference number: 4 (lower is better)
Translates to: KLVKTGCQRFSGREGGVNLPEVQ*ERGRGK
Trigger: TTTACCCCTCCCTCTCTCCCACTGAACCTCTGGCAA...ATTTACCCCTCCCTCTCTCCCACTGAACCTCTGGCAACCAGTCTTTACTAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR TCA 90 bp AAGTTAGTAAAGACTGGTTGCCAGAGGTTCAGTGGGAGAGAGGGAGGGGTAAATACTGAACTGGCTCTCTaGAAGTGGCCTTTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: KLVKTGCQRFSGREGGVNTELAL*KWPFLQ
Trigger: TTGCAGGAAAGGCCACTTTCAGAGAGCCAGTTCAGT...ATTTACCCCTCCCTCTCTCCCACTGAACCTCTGGCAACCAGTCTTTACTAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR TCA 90 bp TTCATGACTGTGGTGGGCACTGGTACTGCTCGTCTCTACCAGGTTGATATCATAACTGAACTGGCTCTCTaGAAGTGGCCTTTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: FMTVVGTGTARLYQVDIITELAL*KWPFLQ
Trigger: TTGCAGGAAAGGCCACTTTCAGAGAGCCAGTTCAGT...TATGATATCAACCTGGTAGAGACGAGCAGTACCAGTGCCCACCACAGTCATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000568073.5
CDS-3UTR TCA 90 bp TTTAGTTTGGATGCTGGAGCCTGGGAGAAAAACCTCTTCACAACGAGCTCCTGTCTTCAGTGTTGTTCATaGCTGTGGTGGGCACTGGTA +
Preference number: 4 (lower is better)
Translates to: FSLDAGAWEKNLFTTSSCLQCCS*LWWALV
Trigger: TACCAGTGCCCACCACAGTCATGAACAACACTGAAG...ACAGGAGCTCGTTGTGAAGAGGTTTTTCTCCCAGGCTCCAGCATCCAAACTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR TCA 90 bp GCCTGGGAGAAAAACCTCTTCACAACGAGCTCCTGTATAGTTTTCAACGCACCTCTTCAGTGTTGTTCATaGCTGTGGTGGGCACTGGTA +
Preference number: 4 (lower is better)
Translates to: AWEKNLFTTSSCIVFNAPLQCCS*LWWALV
Trigger: TACCAGTGCCCACCACAGTCATGAACAACACTGAAG...AGGTGCGTTGAAAACTATACAGGAGCTCGTTGTGAAGAGGTTTTTCTCCCAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR GCA 90 bp TGGGCACTGGTACTGCTCGTCTCTACCAGGTTGATATCATACTGGACTGAACTGAGGTGTGTGAACATTTaGCTCTGGTTGCTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: WALVLLVSTRLISYWTELRCVNI*LWLLQH
Trigger: GTGCTGAAGCAACCAGAGGCAAATGTTCACACACCT...CAGTTCAGTCCAGTATGATATCAACCTGGTAGAGACGAGCAGTACCAGTGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR GCA 90 bp CAACGCACCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCAGGTGTGTGAACATTTaGCTCTGGTTGCTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: QRTFPGFRSQQPSNAGKIRCVNI*LWLLQH
Trigger: GTGCTGAAGCAACCAGAGGCAAATGTTCACACACCT...GATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGGTGCGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR GCA 90 bp GCAGTTGCCGATGGACTGATGCACATTACAGAAGCACACACACCTTGCAGCAGATTAGTAAAGACTGGTTaGCAGAGGTTCAGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: AVADGLMHITEAHTPCSRLVKTG*QRFSGR
Trigger: TCTCCCACTGAACCTCTGGCAACCAGTCTTTACTAA...TCTGCTGCAAGGTGTGTGTGCTTCTGTAATGTGCATCAGTCCATCGGCAACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR CCA 90 bp GCCTGGGAGAAAAACCTCTTCACAACGAGCTCCTGTATAGTTTTCAACGCACCTAAAACGACTTGTGACTaGGACCACAGGGCTCTTCGT +
Preference number: 4 (lower is better)
Translates to: AWEKNLFTTSSCIVFNAPKTTCD*DHRALR
Trigger: ACGAAGAGCCCTGTGGTCCCAGTCACAAGTCGTTTT...AGGTGCGTTGAAAACTATACAGGAGCTCGTTGTGAAGAGGTTTTTCTCCCAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000498750.5
ENST00000562114.5
ENST00000565661.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR CCA 90 bp TTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCCCAAAAACGACTTGTGACTaGGACCACAGGGCTCTTCGT +
Preference number: 4 (lower is better)
Translates to: FPGFRSQQPSNAGKISCPKTTCD*DHRALR
Trigger: ACGAAGAGCCCTGTGGTCCCAGTCACAAGTCGTTTT...TGGGCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000498750.5
ENST00000562114.5
ENST00000565661.5
ENST00000567126.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR CCA 90 bp CGCACCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATTGGATGCTGGAGCCTaGGAGAAAAACCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: RTFPGFRSQQPSNAGKISLDAGA*EKNLFT
Trigger: TGTGAAGAGGTTTTTCTCCCAGGCTCCAGCATCCAA...TGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGGTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000498750.5
ENST00000562114.5
ENST00000565661.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR CCA 90 bp CTTCACAACGAGCTCCTGTATAGTTTTCAACGCACCTTCCCAGGCTTCAGGTCTTTGGATGCTGGAGCCTaGGAGAAAAACCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: LHNELLYSFQRTFPGFRSLDAGA*EKNLFT
Trigger: TGTGAAGAGGTTTTTCTCCCAGGCTCCAGCATCCAA...AGACCTGAAGCCTGGGAAGGTGCGTTGAAAACTATACAGGAGCTCGTTGTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000498750.5
ENST00000562114.5
ENST00000565661.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR CCA 90 bp CTGGTACTGCTCGTCTCTACCAGGTTGATATCATACTGGACTGAACTGGCTCTCTTGGATGCTGGAGCCTaGGAGAAAAACCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: LVLLVSTRLISYWTELALLDAGA*EKNLFT
Trigger: TGTGAAGAGGTTTTTCTCCCAGGCTCCAGCATCCAA...GAGAGCCAGTTCAGTCCAGTATGATATCAACCTGGTAGAGACGAGCAGTACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000563204.5
ENST00000565661.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR CCA 90 bp TGGTGGGCACTGGTACTGCTCGTCTCTACCAGGTTGATATCATACTGGACTGAACATACTGGACTGAACTaGCTCTCTGAAAGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: WWALVLLVSTRLISYWTEHTGLN*LSESGL
Trigger: AAGGCCACTTTCAGAGAGCCAGTTCAGTCCAGTATG...TTCAGTCCAGTATGATATCAACCTGGTAGAGACGAGCAGTACCAGTGCCCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000563204.5
ENST00000565661.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR CCA 90 bp GATTTGGTTCACTTTGACGTTTCTTCAGTGTTGTTCATGACTGTGGTGGGCACTGACTGTGGTGGGCACTaGTACTGCTCGTCTCTACCA +
Preference number: 4 (lower is better)
Translates to: DLVHFDVSSVLFMTVVGTDCGGH*YCSSLP
Trigger: TGGTAGAGACGAGCAGTACCAGTGCCCACCACAGTC...AGTGCCCACCACAGTCATGAACAACACTGAAGAAACGTCAAAGTGAACCAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR CCA 90 bp CATTCTGGAGAAAGCAAAGTTAGTAAAGACTGGTTGCCAGAGGTTCAGTGGGAGTTGCCAGAGGTTCAGTaGGAGAGAGGGAGGGGTAAA +
Preference number: 4 (lower is better)
Translates to: HSGESKVSKDWLPEVQWELPEVQ*ERGRGK
Trigger: TTTACCCCTCCCTCTCTCCCACTGAACCTCTGGCAA...CTCCCACTGAACCTCTGGCAACCAGTCTTTACTAACTTTGCTTTCTCCAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR CCA 90 bp GTTAGGTTTGGCCGGTGCATGCCCTTCTGCCTAAGCCATTTACCAGCCCCAGACAAAACACACAAGTGTTaGCAAGGATGTGGAGAAATT +
Preference number: 4 (lower is better)
Translates to: VRFGRCMPFCLSHLPAPDKTHKC*QGCGEI
Trigger: AATTTCTCCACATCCTTGCCAACACTTGTGTGTTTT...GTCTGGGGCTGGTAAATGGCTTAGGCAGAAGGGCATGCACCGGCCAAACCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
CDS-3UTR TCA 90 bp CAGTCATGGCTTAACTGCAGCCTCTCATTCCTGGGCTCAAGCGATCTTCCCATCAGACAACAGCAGCTGTaGCTTGCATTTTATAACATG +
Preference number: 4 (lower is better)
Translates to: QSWLNCSLSFLGSSDLPIRQQQL*LAFYNM
Trigger: CATGTTATAAAATGCAAGTCACAGCTGCTGTTGTCT...GATGGGAAGATCGCTTGAGCCCAGGAATGAGAGGCTGCAGTTAAGCCATGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563204.5
CDS-3UTR TCA 90 bp CTGGTACTGCTCGTCTCTACCAGGTTGATATCATACTGGACTGAACTGGCTCTCTCGTCTCTACCAGGTTaGTATCATACTGGACTGAAC +
Preference number: 4 (lower is better)
Translates to: LVLLVSTRLISYWTELALSSLPG*YHTGLN
Trigger: GTTCAGTCCAGTATGATATCAACCTGGTAGAGACGA...GAGAGCCAGTTCAGTCCAGTATGATATCAACCTGGTAGAGACGAGCAGTACCAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000563204.5
ENST00000565661.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR TCA 90 bp GCACTGGTACTGCTCGTCTCTACCAGGTTGATATCATACTGGACTGAACTGGCTTCGTCTCTACCAGGTTaGTATCATACTGGACTGAAC +
Preference number: 4 (lower is better)
Translates to: ALVLLVSTRLISYWTELASSLPG*YHTGLN
Trigger: GTTCAGTCCAGTATGATATCAACCTGGTAGAGACGA...AGCCAGTTCAGTCCAGTATGATATCAACCTGGTAGAGACGAGCAGTACCAGTGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000563204.5
ENST00000565661.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR TCA 90 bp CGCACCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATCGTCTCTACCAGGTTaGTATCATACTGGACTGAAC +
Preference number: 4 (lower is better)
Translates to: RTFPGFRSQQPSNAGKISSSLPG*YHTGLN
Trigger: GTTCAGTCCAGTATGATATCAACCTGGTAGAGACGA...TGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGGTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR TCA 90 bp CCTCTGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGTGGGGAGAGTCATGTTaGACCAATGTGACTTCGAAT +
Preference number: 4 (lower is better)
Translates to: PLVASAHQLSGESHVEPMWGESC*TNVTSN
Trigger: ATTCGAAGTCACATTGGTTCAACATGACTCTCCCCA...CATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR TCA 90 bp AGTTTTCAACGCACCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGTGGGGAGAGTCATGTTaGACCAATGTGACTTCGAAT +
Preference number: 4 (lower is better)
Translates to: SFQRTFPGFRSQQPSNAGWGESC*TNVTSN
Trigger: ATTCGAAGTCACATTGGTTCAACATGACTCTCCCCA...CCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGGTGCGTTGAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR TCA 90 bp CGCACCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATGGGGAGAGTCATGTTaGACCAATGTGACTTCGAAT +
Preference number: 4 (lower is better)
Translates to: RTFPGFRSQQPSNAGKISWGESC*TNVTSN
Trigger: ATTCGAAGTCACATTGGTTCAACATGACTCTCCCCA...TGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGGTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR TCA 90 bp TTGGATGCTGGAGCCTGGGAGAAAAACCTCTTCACAACGAGCTCCTGTATAGTTTTCTCTCTAGGTGTGTaGACATTTGCCTCTGGTTGC +
Preference number: 4 (lower is better)
Translates to: LDAGAWEKNLFTTSSCIVFSLGV*TFASGC
Trigger: GCAACCAGAGGCAAATGTTCACACACCTAGAGAGAA...AACTATACAGGAGCTCGTTGTGAAGAGGTTTTTCTCCCAGGCTCCAGCATCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR TCA 90 bp ACATTACAGAAGCACACACACCTTGCAGCAGAATGGATTATGGTTCATGATACGCGTGCATCCCAGCCTTaGCGAGGACATAGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: TLQKHTHLAAEWIMVHDTRASQP*RGHSSE
Trigger: CTCTGAACTATGTCCTCGTCAAGGCTGGGATGCACG...CGTATCATGAACCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCTGTAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR TCA 90 bp GGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCCCAACTTGGAATAAGAACTGAACTGGCTCTCTaGAAGTGGCCTTTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GLNNLLMQGKSHAQLGIRTELAL*KWPFPG
Trigger: GCCTGGGAAAGGCCACTTTCAGAGAGCCAGTTCAGT...TCTTATTCCAAGTTGGGCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565661.5
CDS-3UTR GCA 90 bp TTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCCCAGAAAGTGGCCTTTCCTaGAAAGGAAGTAGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: FPGFRSQQPSNAGKISCPESGLS*KGSRRL
Trigger: GAGCCTTCTACTTCCTTTGCAGGAAAGGCCACTTTC...TGGGCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR GCA 90 bp CTCTTCACAACGAGCTCCTGTATAGTTTTCAACGCACCTTCCCAGGCTTCAGGTACATTTGCCTCTGGTTaGTTCAGCACATCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: LFTTSSCIVFNAPSQASGTFASG*FSTSAF
Trigger: GAAAGCTGATGTGCTGAAGCAACCAGAGGCAAATGT...ACCTGAAGCCTGGGAAGGTGCGTTGAAAACTATACAGGAGCTCGTTGTGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR GCA 90 bp ATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGTGACTTCGAATTATACTGGCGGTGCATGCCCTTCTaGCTAAGCCATTTACCAGCC +
Preference number: 4 (lower is better)
Translates to: ISFLGRVMLNQCDFELYWRCMPF*LSHLPA
Trigger: GGCTGGTAAATGGCTTAGGCAGAAGGGCATGCACCG...CCAGTATAATTCGAAGTCACATTGGTTCAACATGACTCTCCCCAGAAAGCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR GCA 90 bp AGTTTTCAACGCACCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGTTAGTAAAGACTGGTTaGCAGAGGTTCAGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SFQRTFPGFRSQQPSNAGLVKTG*QRFSGR
Trigger: TCTCCCACTGAACCTCTGGCAACCAGTCTTTACTAA...CCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGGTGCGTTGAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000472094.5
CDS-3UTR GCA 90 bp CCTCCCAAGCAGCTAGGACTACATGCATGTGTTACCACACCTGCAAAGGAAGTAATGTGTTACCACACCTaGAAAGGAAGTAGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: PPKQLGLHACVTTPAKEVMCYHT*KGSRRL
Trigger: GAGCCTTCTACTTCCTTTGCAGGTGTGGTAACACAT...TACTTCCTTTGCAGGTGTGGTAACACATGCATGTAGTCCTAGCTGCTTGGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498750.5
ENST00000565661.5
CDS-3UTR CCA 90 bp TGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGTGACTTGGATGCTGGAGCCTaGGAGAAAAACCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: WLLQHISFLGRVMLNQCDLDAGA*EKNLFT
Trigger: TGTGAAGAGGTTTTTCTCCCAGGCTCCAGCATCCAA...GTCACATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR CCA 90 bp ATTTGCCTCTGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACCATACTGGACTGAACTaGCTCTCTGAAAGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: ICLWLLQHISFLGRVMLNHTGLN*LSESGL
Trigger: AAGGCCACTTTCAGAGAGCCAGTTCAGTCCAGTATG...GTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCAGAGGCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR CCA 90 bp ACCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCCATACTGGACTGAACTaGCTCTCTGAAAGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: TFPGFRSQQPSNAGKISCHTGLN*LSESGL
Trigger: AAGGCCACTTTCAGAGAGCCAGTTCAGTCCAGTATG...GCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR CCA 90 bp GCACCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATGTGAACATTTGCCTCTaGTTGCTTCAGCACATCAGC +
Preference number: 4 (lower is better)
Translates to: APSQASGLNNLLMQGKSHVNICL*LLQHIS
Trigger: GCTGATGTGCTGAAGCAACCAGAGGCAAATGTTCAC...ATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR TCA 90 bp CATTTGCCTCTGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAATCGTCTCTACCAGGTTaGTATCATACTGGACTGAAC +
Preference number: 4 (lower is better)
Translates to: HLPLVASAHQLSGESHVESSLPG*YHTGLN
Trigger: GTTCAGTCCAGTATGATATCAACCTGGTAGAGACGA...TTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCAGAGGCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR TCA 90 bp AGCCTGGGAGAAAAACCTCTTCACAACGAGCTCCTGTATAGTTTTCAACGCACCTCGTCTCTACCAGGTTaGTATCATACTGGACTGAAC +
Preference number: 4 (lower is better)
Translates to: SLGEKPLHNELLYSFQRTSSLPG*YHTGLN
Trigger: GTTCAGTCCAGTATGATATCAACCTGGTAGAGACGA...GGTGCGTTGAAAACTATACAGGAGCTCGTTGTGAAGAGGTTTTTCTCCCAGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR TCA 90 bp TTCATGACTGTGGTGGGCACTGGTACTGCTCGTCTCTACCAGGTTGATATCATATGGGGAGAGTCATGTTaGACCAATGTGACTTCGAAT +
Preference number: 4 (lower is better)
Translates to: FMTVVGTGTARLYQVDIIWGESC*TNVTSN
Trigger: ATTCGAAGTCACATTGGTTCAACATGACTCTCCCCA...TATGATATCAACCTGGTAGAGACGAGCAGTACCAGTGCCCACCACAGTCATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR TCA 90 bp TTGGATGCTGGAGCCTGGGAGAAAAACCTCTTCACAACGAGCTCCTGTATAGTTTGGGGAGAGTCATGTTaGACCAATGTGACTTCGAAT +
Preference number: 4 (lower is better)
Translates to: LDAGAWEKNLFTTSSCIVWGESC*TNVTSN
Trigger: ATTCGAAGTCACATTGGTTCAACATGACTCTCCCCA...AACTATACAGGAGCTCGTTGTGAAGAGGTTTTTCTCCCAGGCTCCAGCATCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR TCA 90 bp ACTGGACTGAACTGGCTCTCTGAAAGTGGCCTTTCCTGCAAAGGAAGTAGAAGGTTGAAAGCGGAGGCTTaGGGGTATATTTGTATACCA +
Preference number: 4 (lower is better)
Translates to: TGLNWLSESGLSCKGSRRLKAEA*GYICIP
Trigger: TGGTATACAAATATACCCTCAAGCCTCCGCTTTCAA...CCTTCTACTTCCTTTGCAGGAAAGGCCACTTTCAGAGAGCCAGTTCAGTCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461391.5
CDS-3UTR GCA 90 bp AACCTCTTCACAACGAGCTCCTGTATAGTTTTCAACGCACCTTCCCAGGCTTCAACATTTGCCTCTGGTTaGTTCAGCACATCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: NLFTTSSCIVFNAPSQASTFASG*FSTSAF
Trigger: GAAAGCTGATGTGCTGAAGCAACCAGAGGCAAATGT...TGAAGCCTGGGAAGGTGCGTTGAAAACTATACAGGAGCTCGTTGTGAAGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR GCA 90 bp GACCCACTGAATTCACAGCACTTACACTGGGCCAGACTGTGTAGAGAAGCCAGCTTTTTCATCAGTACTTaGAGCTTCTCAGATAACAGC +
Preference number: 4 (lower is better)
Translates to: DPLNSQHLHWARLCREASFFIST*SFSDNS
Trigger: GCTGTTATCTGAGAAGCTGCAAGTACTGATGAAAAA...GCTGGCTTCTCTACACAGTCTGGCCCAGTGTAAGTGCTGTGAATTCAGTGGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR GCA 90 bp GTGTGGTTTGAATTCTCCTTTAAGCCAGTTGTGACATCTATTGGTTCCCTCATTCGGTGCATGCCCTTCTaGCTAAGCCATTTACCAGCC +
Preference number: 4 (lower is better)
Translates to: VWFEFSFKPVVTSIGSLIRCMPF*LSHLPA
Trigger: GGCTGGTAAATGGCTTAGGCAGAAGGGCATGCACCG...AATGAGGGAACCAATAGATGTCACAACTGGCTTAAAGGAGAATTCAAACCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461391.5
CDS-3UTR GCA 90 bp CTGGTACTGCTCGTCTCTACCAGGTTGATATCATACTGGACTGAACTGGCTCTCGCAGGGAAAATCTCATaGCCAACTTGGAATAAGACA +
Preference number: 4 (lower is better)
Translates to: LVLLVSTRLISYWTELALAGKIS*PTWNKT
Trigger: TGTCTTATTCCAAGTTGGGCATGAGATTTTCCCTGC...GAGAGCCAGTTCAGTCCAGTATGATATCAACCTGGTAGAGACGAGCAGTACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR GCA 90 bp GCACCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATATGTGTTACCACACCTaGAAAGGAAGTAGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: APSQASGLNNLLMQGKSHMCYHT*KGSRRL
Trigger: GAGCCTTCTACTTCCTTTGCAGGTGTGGTAACACAT...ATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498750.5
ENST00000565661.5
CDS-3UTR CCA 90 bp GATGCACATTACAGAAGCACACACACCTTGCAGCAGAATGGATTATGGTTCATGAAAACGACTTGTGACTaGGACCACAGGGCTCTTCGT +
Preference number: 4 (lower is better)
Translates to: DAHYRSTHTLQQNGLWFMKTTCD*DHRALR
Trigger: ACGAAGAGCCCTGTGGTCCCAGTCACAAGTCGTTTT...CATGAACCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCTGTAATGTGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
CDS-3UTR CCA 90 bp TGGGCACTGGTACTGCTCGTCTCTACCAGGTTGATATCATACTGGACTGAACTGAACGCACCTACAAAATaGGCTGGGAATAGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: WALVLLVSTRLISYWTELNAPTK*AGNSRY
Trigger: ATACCTACTATTCCCAGCCCATTTTGTAGGTGCGTT...CAGTTCAGTCCAGTATGATATCAACCTGGTAGAGACGAGCAGTACCAGTGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563204.5
CDS-3UTR CCA 90 bp GCCTGGGAGAAAAACCTCTTCACAACGAGCTCCTGTATAGTTTTCAACGCACCTAGGTTACTTTTAGTTTaGATGCTGGAGCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: AWEKNLFTTSSCIVFNAPRLLLV*MLEPGR
Trigger: TCTCCCAGGCTCCAGCATCCAAACTAAAAGTAACCT...AGGTGCGTTGAAAACTATACAGGAGCTCGTTGTGAAGAGGTTTTTCTCCCAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000498750.5
ENST00000562114.5
ENST00000565661.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR CCA 90 bp AACCTCTTCACAACGAGCTCCTGTATAGTTTTCAACGCACCTTCCCAGGCTTCAAGGTTACTTTTAGTTTaGATGCTGGAGCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: NLFTTSSCIVFNAPSQASRLLLV*MLEPGR
Trigger: TCTCCCAGGCTCCAGCATCCAAACTAAAAGTAACCT...TGAAGCCTGGGAAGGTGCGTTGAAAACTATACAGGAGCTCGTTGTGAAGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000498750.5
ENST00000562114.5
ENST00000565661.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR CCA 90 bp ACCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCAGGTTACTTTTAGTTTaGATGCTGGAGCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: TFPGFRSQQPSNAGKISCRLLLV*MLEPGR
Trigger: TCTCCCAGGCTCCAGCATCCAAACTAAAAGTAACCT...GCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000498750.5
ENST00000562114.5
ENST00000565661.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR CCA 90 bp CCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCCCACCTTGCAGCAGAATaGATTATGGTTCATGATACG +
Preference number: 4 (lower is better)
Translates to: PSQASGLNNLLMQGKSHAHLAAE*IMVHDT
Trigger: CGTATCATGAACCATAATCCATTCTGCTGCAAGGTG...GGCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
CDS-3UTR CCA 90 bp TGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGTGACCTTAGCAGTTGCCGATaGACTGATGCACATTACAGA +
Preference number: 4 (lower is better)
Translates to: WLLQHISFLGRVMLNQCDLSSCR*TDAHYR
Trigger: TCTGTAATGTGCATCAGTCCATCGGCAACTGCTAAG...GTCACATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR CCA 90 bp AACCTCTTCACAACGAGCTCCTGTATAGTTTTCAACGCACCTTCCCAGGCTTCACTTAGCAGTTGCCGATaGACTGATGCACATTACAGA +
Preference number: 4 (lower is better)
Translates to: NLFTTSSCIVFNAPSQASLSSCR*TDAHYR
Trigger: TCTGTAATGTGCATCAGTCCATCGGCAACTGCTAAG...TGAAGCCTGGGAAGGTGCGTTGAAAACTATACAGGAGCTCGTTGTGAAGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR CCA 90 bp TTGGATGCTGGAGCCTGGGAGAAAAACCTCTTCACAACGAGCTCCTGTATAGTTCTTAGCAGTTGCCGATaGACTGATGCACATTACAGA +
Preference number: 4 (lower is better)
Translates to: LDAGAWEKNLFTTSSCIVLSSCR*TDAHYR
Trigger: TCTGTAATGTGCATCAGTCCATCGGCAACTGCTAAG...AACTATACAGGAGCTCGTTGTGAAGAGGTTTTTCTCCCAGGCTCCAGCATCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR CCA 90 bp GCAGTTGCCGATGGACTGATGCACATTACAGAAGCACACACACCTTGCAGCAGAGTGCATAGTGGTGACTaGTACATACAACGAATGTAT +
Preference number: 4 (lower is better)
Translates to: AVADGLMHITEAHTPCSRVHSGD*YIQRMY
Trigger: ATACATTCGTTGTATGTACCAGTCACCACTATGCAC...TCTGCTGCAAGGTGTGTGTGCTTCTGTAATGTGCATCAGTCCATCGGCAACTGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
CDS-3UTR TCA 90 bp TTGTTCATGACTGTGGTGGGCACTGGTACTGCTCGTCTCTACCAGGTTGATATCAGACAACAGCAGCTGTaGCTTGCATTTTATAACATG +
Preference number: 4 (lower is better)
Translates to: LFMTVVGTGTARLYQVDIRQQQL*LAFYNM
Trigger: CATGTTATAAAATGCAAGTCACAGCTGCTGTTGTCT...GATATCAACCTGGTAGAGACGAGCAGTACCAGTGCCCACCACAGTCATGAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000562114.5
CDS-3UTR TCA 90 bp CCAATGATAAGTGTTACTAGGACCGCCAATGCCACAAAAGCTTCAAACAGGTTACTTCAGTGTTGTTCATaGCTGTGGTGGGCACTGGTA +
Preference number: 4 (lower is better)
Translates to: PMISVTRTANATKASNRLLQCCS*LWWALV
Trigger: TACCAGTGCCCACCACAGTCATGAACAACACTGAAG...TAACCTGTTTGAAGCTTTTGTGGCATTGGCGGTCCTAGTAACACTTATCATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR TCA 90 bp CAACGCACCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCATGGATTATGGTTCATaGTACGAGTTACACAAGCGT +
Preference number: 4 (lower is better)
Translates to: QRTFPGFRSQQPSNAGKIMDYGS*YELHKR
Trigger: ACGCTTGTGTAACTCGTATCATGAACCATAATCCAT...GATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGGTGCGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
CDS-3UTR TCA 90 bp CTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGTGACTTCGAATGGGGAGAGTCATGTTaGACCAATGTGACTTCGAAT +
Preference number: 4 (lower is better)
Translates to: LQHISFLGRVMLNQCDFEWGESC*TNVTSN
Trigger: ATTCGAAGTCACATTGGTTCAACATGACTCTCCCCA...TTCGAAGTCACATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR TCA 90 bp CGGAGGCTTGAGGGTATATTTGTATACCAGTGTTCACTGCAGCATTATTCACCGATTAGTGTGGGATCATaGAAAAGTTCCGGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: RRLEGIFVYQCSLQHYSPISVGS*KSSGGA
Trigger: TGCACCTCCGGAACTTTTTCATGATCCCACACTAAT...CGGTGAATAATGCTGCAGTGAACACTGGTATACAAATATACCCTCAAGCCTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
CDS-3UTR GCA 90 bp AGCGGAGGCTTGAGGGTATATTTGTATACCAGTGTTCACTGCAGCATTATTCACAGGTGTGTGAACATTTaGCTCTGGTTGCTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: SGGLRVYLYTSVHCSIIHRCVNI*LWLLQH
Trigger: GTGCTGAAGCAACCAGAGGCAAATGTTCACACACCT...GTGAATAATGCTGCAGTGAACACTGGTATACAAATATACCCTCAAGCCTCCGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
CDS-3UTR GCA 90 bp TGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGTGACCCCAGACCTTTCCACTaGTCCAAGACTTTATTTTCA +
Preference number: 4 (lower is better)
Translates to: WLLQHISFLGRVMLNQCDPRPFH*SKTLFS
Trigger: TGAAAATAAAGTCTTGGAGCAGTGGAAAGGTCTGGG...GTCACATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR GCA 90 bp TTTTGTGTACTCTGTCTCAATGTCTTACCCTCATGTGTTTGTGAAATGAGTGAAGTAGAGAAGCCAGCGTaGATCCCAGCCTTGACGAGG +
Preference number: 4 (lower is better)
Translates to: FCVLCLNVLPSCVCEMSEVEKPA*IPALTR
Trigger: CCTCGTCAAGGCTGGGATGCACGCTGGCTTCTCTAC...TTCACTCATTTCACAAACACATGAGGGTAAGACATTGAGACAGAGTACACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR GCA 90 bp ATTTGCCTCTGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACGCAGGGAAAATCTCATaGCCAACTTGGAATAAGACA +
Preference number: 4 (lower is better)
Translates to: ICLWLLQHISFLGRVMLNAGKIS*PTWNKT
Trigger: TGTCTTATTCCAAGTTGGGCATGAGATTTTCCCTGC...GTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCAGAGGCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR GCA 90 bp TTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCCCAGTCTCTGAATCACACTaGCCAAGTTTGAATCTTGGT +
Preference number: 4 (lower is better)
Translates to: FPGFRSQQPSNAGKISCPVSESH*PSLNLG
Trigger: ACCAAGATTCAAACTTGGGCAGTGTGATTCAGAGAC...TGGGCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567126.5
CDS-3UTR CCA 90 bp GGGAGAGTCATGTTGAACCAATGTGACTTCGAATTATACTGGTATCACCCCCTATTGGATGCTGGAGCCTaGGAGAAAAACCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: GRVMLNQCDFELYWYHPLLDAGA*EKNLFT
Trigger: TGTGAAGAGGTTTTTCTCCCAGGCTCCAGCATCCAA...TAGGGGGTGATACCAGTATAATTCGAAGTCACATTGGTTCAACATGACTCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR CCA 90 bp TGTATAGTTTTCAACGCACCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGTTGGATGCTGGAGCCTaGGAGAAAAACCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: CIVFNAPSQASGLNNLLMLDAGA*EKNLFT
Trigger: TGTGAAGAGGTTTTTCTCCCAGGCTCCAGCATCCAA...CATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGGTGCGTTGAAAACTATACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000498750.5
ENST00000562114.5
ENST00000565661.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR CCA 90 bp TATAGTTTTCAACGCACCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCACATACTGGACTGAACTaGCTCTCTGAAAGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: YSFQRTFPGFRSQQPSNAHTGLN*LSESGL
Trigger: AAGGCCACTTTCAGAGAGCCAGTTCAGTCCAGTATG...TGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGGTGCGTTGAAAACTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR CCA 90 bp TGTATAGTTTTCAACGCACCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCATACTGGACTGAACTaGCTCTCTGAAAGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: CIVFNAPSQASGLNNLLMHTGLN*LSESGL
Trigger: AAGGCCACTTTCAGAGAGCCAGTTCAGTCCAGTATG...CATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGGTGCGTTGAAAACTATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR CCA 90 bp AAACTGGGTATGAGTTGGCTTAATGAAAATCCTAGTGGTGTTTCATTTTCTGCCGACTGTGGTGGGCACTaGTACTGCTCGTCTCTACCA +
Preference number: 4 (lower is better)
Translates to: KLGMSWLNENPSGVSFSADCGGH*YCSSLP
Trigger: TGGTAGAGACGAGCAGTACCAGTGCCCACCACAGTC...GGCAGAAAATGAAACACCACTAGGATTTTCATTAAGCCAACTCATACCCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566417.5
CDS-3UTR CCA 90 bp CTGATGCACATTACAGAAGCACACACACCTTGCAGCAGAATGGATTATGGTTCAGTGAACATTTGCCTCTaGTTGCTTCAGCACATCAGC +
Preference number: 4 (lower is better)
Translates to: LMHITEAHTPCSRMDYGSVNICL*LLQHIS
Trigger: GCTGATGTGCTGAAGCAACCAGAGGCAAATGTTCAC...TGAACCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCTGTAATGTGCATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
CDS-3UTR CCA 90 bp GTGGTTTTGAAGCCACTAAGCCAGCTACTCCTTGCATTTAAAGGGTTTTCATCCGTGAACATTTGCCTCTaGTTGCTTCAGCACATCAGC +
Preference number: 4 (lower is better)
Translates to: VVLKPLSQLLLAFKGFSSVNICL*LLQHIS
Trigger: GCTGATGTGCTGAAGCAACCAGAGGCAAATGTTCAC...GGATGAAAACCCTTTAAATGCAAGGAGTAGCTGGCTTAGTGGCTTCAAAACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR CCA 90 bp ACACACACCTTGCAGCAGAATGGATTATGGTTCATGATACGAGTTACACAAGCGGTGAACATTTGCCTCTaGTTGCTTCAGCACATCAGC +
Preference number: 4 (lower is better)
Translates to: THTLQQNGLWFMIRVTQAVNICL*LLQHIS
Trigger: GCTGATGTGCTGAAGCAACCAGAGGCAAATGTTCAC...CGCTTGTGTAACTCGTATCATGAACCATAATCCATTCTGCTGCAAGGTGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
CDS-3UTR CCA 90 bp CAACCTTCTAATGCAGGGAAAATCTCATGCCCAACTTGGAATAAGACAAAGAGATTGCCAGAGGTTCAGTaGGAGAGAGGGAGGGGTAAA +
Preference number: 4 (lower is better)
Translates to: QPSNAGKISCPTWNKTKRLPEVQ*ERGRGK
Trigger: TTTACCCCTCCCTCTCTCCCACTGAACCTCTGGCAA...TCTCTTTGTCTTATTCCAAGTTGGGCATGAGATTTTCCCTGCATTAGAAGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000472094.5
CDS-3UTR CCA 90 bp GCAGCTAGGACTACATGCATGTGTTACCACACCTGCAAAGGAAGTAGAAGGCTCATCTCATGCCCAACTTaGAATAAGACAAAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: AARTTCMCYHTCKGSRRLISCPT*NKTKRS
Trigger: GCTTCTCTTTGTCTTATTCCAAGTTGGGCATGAGAT...GAGCCTTCTACTTCCTTTGCAGGTGTGGTAACACATGCATGTAGTCCTAGCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498750.5
ENST00000565661.5
CDS-3UTR CCA 90 bp CTTCACAACGAGCTCCTGTATAGTTTTCAACGCACCTTCCCAGGCTTCAGGTCTATCTCATGCCCAACTTaGAATAAGACAAAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LHNELLYSFQRTFPGFRSISCPT*NKTKRS
Trigger: GCTTCTCTTTGTCTTATTCCAAGTTGGGCATGAGAT...AGACCTGAAGCCTGGGAAGGTGCGTTGAAAACTATACAGGAGCTCGTTGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000498750.5
ENST00000562114.5
ENST00000565661.5
ENST00000567126.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR CCA 90 bp CCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCCTCACTTCCTACAAAATaGGCTGGGAATAGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: PSQASGLNNLLMQGKSHASLPTK*AGNSRY
Trigger: ATACCTACTATTCCCAGCCCATTTTGTAGGAAGTGA...GGCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000472094.5
ENST00000498750.5
ENST00000562114.5
ENST00000567126.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR CCA 90 bp TGGTGGGCACTGGTACTGCTCGTCTCTACCAGGTTGATATCATACTGGACTGAATCACTTCCTACAAAATaGGCTGGGAATAGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: WWALVLLVSTRLISYWTESLPTK*AGNSRY
Trigger: ATACCTACTATTCCCAGCCCATTTTGTAGGAAGTGA...TTCAGTCCAGTATGATATCAACCTGGTAGAGACGAGCAGTACCAGTGCCCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000472094.5
ENST00000562114.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR CCA 90 bp GCACCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATCCCAAGTTTGAATCTTaGTTCCTTACTAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: APSQASGLNNLLMQGKSHPKFES*FLTSCV
Trigger: CACACAGCTAGTAAGGAACCAAGATTCAAACTTGGG...ATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567126.5
CDS-3UTR TCA 90 bp CTTCCTTTGAGAGACAGATCCTTGAAATCAGTCACTTCTAGTAGAAAGCATTTTAGGCAAAACGACTTGTaGCTGGGACCACAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: LPLRDRSLKSVTSSRKHFRQNDL*LGPQGS
Trigger: AGAGCCCTGTGGTCCCAGTCACAAGTCGTTTTGCCT...AAAATGCTTTCTACTAGAAGTGACTGATTTCAAGGATCTGTCTCTCAAAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000568073.5
CDS-3UTR TCA 90 bp CAACAACCTTCTAATGCAGGGAAAATCTCATGCCCAACTTGGAATAAGACAAAGCTTCAGTGTTGTTCATaGCTGTGGTGGGCACTGGTA +
Preference number: 4 (lower is better)
Translates to: QQPSNAGKISCPTWNKTKLQCCS*LWWALV
Trigger: TACCAGTGCCCACCACAGTCATGAACAACACTGAAG...CTTTGTCTTATTCCAAGTTGGGCATGAGATTTTCCCTGCATTAGAAGGTTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR TCA 90 bp ATTTGCCTCTGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACATGGATTATGGTTCATaGTACGAGTTACACAAGCGT +
Preference number: 4 (lower is better)
Translates to: ICLWLLQHISFLGRVMLNMDYGS*YELHKR
Trigger: ACGCTTGTGTAACTCGTATCATGAACCATAATCCAT...GTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCAGAGGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
CDS-3UTR TCA 90 bp TTGAACCAATGTGACTTCGAATTATACTGGTATCACCCCCTACTTAGCAGTTGCTTCTCTCTAGGTGTGTaGACATTTGCCTCTGGTTGC +
Preference number: 4 (lower is better)
Translates to: LNQCDFELYWYHPLLSSCFSLGV*TFASGC
Trigger: GCAACCAGAGGCAAATGTTCACACACCTAGAGAGAA...GCAACTGCTAAGTAGGGGGTGATACCAGTATAATTCGAAGTCACATTGGTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR TCA 90 bp ACACACACCTTGCAGCAGAATGGATTATGGTTCATGATACGAGTTACACAAGCGACACTAGTGACCCACTaGATTCACAGCACTTACACT +
Preference number: 4 (lower is better)
Translates to: THTLQQNGLWFMIRVTQATLVTH*IHSTYT
Trigger: AGTGTAAGTGCTGTGAATTCAGTGGGTCACTAGTGT...CGCTTGTGTAACTCGTATCATGAACCATAATCCATTCTGCTGCAAGGTGTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR TCA 90 bp CATTTGCCTCTGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAATATACACAAAATAATTaGAAGCGGAGGCTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: HLPLVASAHQLSGESHVEYTQNN*KRRLEG
Trigger: ACCCTCAAGCCTCCGCTTTCAATTATTTTGTGTATA...TTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCAGAGGCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
CDS-3UTR TCA 90 bp AACCTCTTCACAACGAGCTCCTGTATAGTTTTCAACGCACCTTCCCAGGCTTCATATACACAAAATAATTaGAAGCGGAGGCTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: NLFTTSSCIVFNAPSQASYTQNN*KRRLEG
Trigger: ACCCTCAAGCCTCCGCTTTCAATTATTTTGTGTATA...TGAAGCCTGGGAAGGTGCGTTGAAAACTATACAGGAGCTCGTTGTGAAGAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461391.5
CDS-3UTR GCA 90 bp GGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCCCAACTTGGAATAAGAGAAAGTGGCCTTTCCTaGAAAGGAAGTAGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: GLNNLLMQGKSHAQLGIRESGLS*KGSRRL
Trigger: GAGCCTTCTACTTCCTTTGCAGGAAAGGCCACTTTC...TCTTATTCCAAGTTGGGCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR GCA 90 bp TTGAACCAATGTGACTTCGAATTATACTGGTATCACCCCCTACTTAGCAGTTGCAGGTGTGTGAACATTTaGCTCTGGTTGCTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: LNQCDFELYWYHPLLSSCRCVNI*LWLLQH
Trigger: GTGCTGAAGCAACCAGAGGCAAATGTTCACACACCT...GCAACTGCTAAGTAGGGGGTGATACCAGTATAATTCGAAGTCACATTGGTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR GCA 90 bp CACATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGTGACTTCGAATTATACAGGTGTGTGAACATTTaGCTCTGGTTGCTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: HISFLGRVMLNQCDFELYRCVNI*LWLLQH
Trigger: GTGCTGAAGCAACCAGAGGCAAATGTTCACACACCT...GTATAATTCGAAGTCACATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR GCA 90 bp ATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGTGACTTCGAATTATACTGGAGGTGTGTGAACATTTaGCTCTGGTTGCTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: ISFLGRVMLNQCDFELYWRCVNI*LWLLQH
Trigger: GTGCTGAAGCAACCAGAGGCAAATGTTCACACACCT...CCAGTATAATTCGAAGTCACATTGGTTCAACATGACTCTCCCCAGAAAGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR GCA 90 bp CTCTTCACAACGAGCTCCTGTATAGTTTTCAACGCACCTTCCCAGGCTTCAGGTTTTTTCATCAGTACTTaGAGCTTCTCAGATAACAGC +
Preference number: 4 (lower is better)
Translates to: LFTTSSCIVFNAPSQASGFFIST*SFSDNS
Trigger: GCTGTTATCTGAGAAGCTGCAAGTACTGATGAAAAA...ACCTGAAGCCTGGGAAGGTGCGTTGAAAACTATACAGGAGCTCGTTGTGAAGAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR GCA 90 bp GCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCCCAACTTGGATACTTAATCCCTCTGTaGCTCAGTTTCTTCATCCAC +
Preference number: 4 (lower is better)
Translates to: ASGLNNLLMQGKSHAQLGYLIPL*LSFFIH
Trigger: GTGGATGAAGAAACTGAGGCACAGAGGGATTAAGTA...TCCAAGTTGGGCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567126.5
CDS-3UTR CCA 90 bp TCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCCCAACTTGGAATAAGACAAAAACGACTTGTGACTaGGACCACAGGGCTCTTCGT +
Preference number: 4 (lower is better)
Translates to: SQQPSNAGKISCPTWNKTKTTCD*DHRALR
Trigger: ACGAAGAGCCCTGTGGTCCCAGTCACAAGTCGTTTT...TGTCTTATTCCAAGTTGGGCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000498750.5
ENST00000562114.5
ENST00000565661.5
ENST00000567126.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR CCA 90 bp GCACATTACAGAAGCACACACACCTTGCAGCAGAATGGATTATGGTTCATGATATTGGATGCTGGAGCCTaGGAGAAAAACCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: AHYRSTHTLQQNGLWFMILDAGA*EKNLFT
Trigger: TGTGAAGAGGTTTTTCTCCCAGGCTCCAGCATCCAA...TATCATGAACCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCTGTAATGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
CDS-3UTR CCA 90 bp GTGGTTTTGAAGCCACTAAGCCAGCTACTCCTTGCATTTAAAGGGTTTTCATCCAGGTTACTTTTAGTTTaGATGCTGGAGCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: VVLKPLSQLLLAFKGFSSRLLLV*MLEPGR
Trigger: TCTCCCAGGCTCCAGCATCCAAACTAAAAGTAACCT...GGATGAAAACCCTTTAAATGCAAGGAGTAGCTGGCTTAGTGGCTTCAAAACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR CCA 90 bp ATTACCTATGGAGTGGGAGGAAATAATATGCAGTTCACGTACCTAATAAGGATTGACTGTGGTGGGCACTaGTACTGCTCGTCTCTACCA +
Preference number: 4 (lower is better)
Translates to: ITYGVGGNNMQFTYLIRIDCGGH*YCSSLP
Trigger: TGGTAGAGACGAGCAGTACCAGTGCCCACCACAGTC...AATCCTTATTAGGTACGTGAACTGCATATTATTTCCTCCCACTCCATAGGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
CDS-3UTR CCA 90 bp GGGAGAGTCATGTTGAACCAATGTGACTTCGAATTATACTGGTATCACCCCCTACTTAGCAGTTGCCGATaGACTGATGCACATTACAGA +
Preference number: 4 (lower is better)
Translates to: GRVMLNQCDFELYWYHPLLSSCR*TDAHYR
Trigger: TCTGTAATGTGCATCAGTCCATCGGCAACTGCTAAG...TAGGGGGTGATACCAGTATAATTCGAAGTCACATTGGTTCAACATGACTCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR CCA 90 bp ATTTGCCTCTGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACGTGCATAGTGGTGACTaGTACATACAACGAATGTAT +
Preference number: 4 (lower is better)
Translates to: ICLWLLQHISFLGRVMLNVHSGD*YIQRMY
Trigger: ATACATTCGTTGTATGTACCAGTCACCACTATGCAC...GTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCAGAGGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
CDS-3UTR CCA 90 bp AACCTCTTCACAACGAGCTCCTGTATAGTTTTCAACGCACCTTCCCAGGCTTCAATCTCATGCCCAACTTaGAATAAGACAAAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: NLFTTSSCIVFNAPSQASISCPT*NKTKRS
Trigger: GCTTCTCTTTGTCTTATTCCAAGTTGGGCATGAGAT...TGAAGCCTGGGAAGGTGCGTTGAAAACTATACAGGAGCTCGTTGTGAAGAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000498750.5
ENST00000562114.5
ENST00000565661.5
ENST00000567126.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR CCA 90 bp TTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCCCAATCTCATGCCCAACTTaGAATAAGACAAAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: FPGFRSQQPSNAGKISCPISCPT*NKTKRS
Trigger: GCTTCTCTTTGTCTTATTCCAAGTTGGGCATGAGAT...TGGGCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000498750.5
ENST00000562114.5
ENST00000565661.5
ENST00000567126.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR CCA 90 bp CATTTGCCTCTGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAAATCTCATGCCCAACTTaGAATAAGACAAAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: HLPLVASAHQLSGESHVEISCPT*NKTKRS
Trigger: GCTTCTCTTTGTCTTATTCCAAGTTGGGCATGAGAT...TTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCAGAGGCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR CCA 90 bp AGTTTGGATGCTGGAGCCTGGGAGAAAAACCTCTTCACAACGAGCTCCTGTATATCACTTCCTACAAAATaGGCTGGGAATAGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: SLDAGAWEKNLFTTSSCISLPTK*AGNSRY
Trigger: ATACCTACTATTCCCAGCCCATTTTGTAGGAAGTGA...TATACAGGAGCTCGTTGTGAAGAGGTTTTTCTCCCAGGCTCCAGCATCCAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000472094.5
ENST00000498750.5
ENST00000562114.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR CCA 90 bp ACCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCTCACTTCCTACAAAATaGGCTGGGAATAGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: TFPGFRSQQPSNAGKISCSLPTK*AGNSRY
Trigger: ATACCTACTATTCCCAGCCCATTTTGTAGGAAGTGA...GCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000472094.5
ENST00000498750.5
ENST00000562114.5
ENST00000567126.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR CCA 90 bp GCAGCTAGGACTACATGCATGTGTTACCACACCTGCAAAGGAAGTAGAAGGCTCCTCTTGATTATAATTTaGGTTTCCCATCTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: AARTTCMCYHTCKGSRRLLLIII*VSHLGP
Trigger: TGGACCTAGATGGGAAACCCAAATTATAATCAAGAG...GAGCCTTCTACTTCCTTTGCAGGTGTGGTAACACATGCATGTAGTCCTAGCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565661.5
CDS-3UTR CCA 90 bp CCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCCCTCTTGATTATAATTTaGGTTTCCCATCTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: PSQASGLNNLLMQGKSHALLIII*VSHLGP
Trigger: TGGACCTAGATGGGAAACCCAAATTATAATCAAGAG...GGCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565661.5
ENST00000567126.5
3UTR CAA 72 bp CGATGGACTGATGCACATTACAGAAGCACACACACCTaGCAGCAGAATGGATTATGGTTCATGATACGAGTT +
Preference number: 4 (lower is better)
Translates to: RWTDAHYRSTHT*QQNGLWFMIRV
Trigger: AACTCGTATCATGAACCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCTGTAATGTGCATCAGTCCATCG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR CAA 72 bp TGCAGCTTCTCAGATAACAGCAGGAATGAGGTGGTTTaGAAGCCACTAAGCCAGCTACTCCTTGCATTTAAA +
Preference number: 4 (lower is better)
Translates to: CSFSDNSRNEVV*KPLSQLLLAFK
Trigger: TTTAAATGCAAGGAGTAGCTGGCTTAGTGGCTTCAAAACCACCTCATTCCTGCTGTTATCTGAGAAGCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR TCA 90 bp AAACTGGGTATGAGTTGGCTTAATGAAAATCCTAGTGGTGTTTCATTTTCTGCCACTGAACTGGCTCTCTaGAAGTGGCCTTTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: KLGMSWLNENPSGVSFSATELAL*KWPFLQ
Trigger: TTGCAGGAAAGGCCACTTTCAGAGAGCCAGTTCAGT...GGCAGAAAATGAAACACCACTAGGATTTTCATTAAGCCAACTCATACCCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566417.5
CDS-3UTR TCA 90 bp TCAAACAGGTTACTTTTAGTTTGGATGCTGGAGCCTGGGAGAAAAACCTCTTCATCGTCTCTACCAGGTTaGTATCATACTGGACTGAAC +
Preference number: 4 (lower is better)
Translates to: SNRLLLVWMLEPGRKTSSSSLPG*YHTGLN
Trigger: GTTCAGTCCAGTATGATATCAACCTGGTAGAGACGA...TGAAGAGGTTTTTCTCCCAGGCTCCAGCATCCAAACTAAAAGTAACCTGTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR TCA 90 bp AAACTGGGTATGAGTTGGCTTAATGAAAATCCTAGTGGTGTTTCATTTTCTGCCCTTCAGTGTTGTTCATaGCTGTGGTGGGCACTGGTA +
Preference number: 4 (lower is better)
Translates to: KLGMSWLNENPSGVSFSALQCCS*LWWALV
Trigger: TACCAGTGCCCACCACAGTCATGAACAACACTGAAG...GGCAGAAAATGAAACACCACTAGGATTTTCATTAAGCCAACTCATACCCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566417.5
CDS-3UTR TCA 90 bp CAACCTTCTAATGCAGGGAAAATCTCATGCCCAACTTGGAATAAGACAAAGAGATTCTCTCTAGGTGTGTaGACATTTGCCTCTGGTTGC +
Preference number: 4 (lower is better)
Translates to: QPSNAGKISCPTWNKTKRFSLGV*TFASGC
Trigger: GCAACCAGAGGCAAATGTTCACACACCTAGAGAGAA...TCTCTTTGTCTTATTCCAAGTTGGGCATGAGATTTTCCCTGCATTAGAAGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR TCA 90 bp GGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCCCAACTTGGAATAAGAATTAGTGTGGGATCATaGAAAAGTTCCGGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: GLNNLLMQGKSHAQLGIRISVGS*KSSGGA
Trigger: TGCACCTCCGGAACTTTTTCATGATCCCACACTAAT...TCTTATTCCAAGTTGGGCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461391.5
CDS-3UTR GCA 90 bp CAACCTTCTAATGCAGGGAAAATCTCATGCCCAACTTGGAATAAGACAAAGAGAGAAAGTGGCCTTTCCTaGAAAGGAAGTAGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: QPSNAGKISCPTWNKTKRESGLS*KGSRRL
Trigger: GAGCCTTCTACTTCCTTTGCAGGAAAGGCCACTTTC...TCTCTTTGTCTTATTCCAAGTTGGGCATGAGATTTTCCCTGCATTAGAAGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR GCA 90 bp ACATTACAGAAGCACACACACCTTGCAGCAGAATGGATTATGGTTCATGATACGACATTTGCCTCTGGTTaGTTCAGCACATCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: TLQKHTHLAAEWIMVHDTTFASG*FSTSAF
Trigger: GAAAGCTGATGTGCTGAAGCAACCAGAGGCAAATGT...CGTATCATGAACCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCTGTAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
CDS-3UTR GCA 90 bp CCAATGATAAGTGTTACTAGGACCGCCAATGCCACAAAAGCTTCAAACAGGTTAACATTTGCCTCTGGTTaGTTCAGCACATCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: PMISVTRTANATKASNRLTFASG*FSTSAF
Trigger: GAAAGCTGATGTGCTGAAGCAACCAGAGGCAAATGT...TAACCTGTTTGAAGCTTTTGTGGCATTGGCGGTCCTAGTAACACTTATCATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR GCA 90 bp CGGAGGCTTGAGGGTATATTTGTATACCAGTGTTCACTGCAGCATTATTCACCGATAGTGGTATGCAGCTaGTGTAGAAAACAGTATGGT +
Preference number: 4 (lower is better)
Translates to: RRLEGIFVYQCSLQHYSPIVVCS*CRKQYG
Trigger: ACCATACTGTTTTCTACAGCAGCTGCATACCACTAT...CGGTGAATAATGCTGCAGTGAACACTGGTATACAAATATACCCTCAAGCCTCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
CDS-3UTR CCA 90 bp GGGAGAGTCATGTTGAACCAATGTGACTTCGAATTATACTGGTATCACCCCCTAAACGCACCTACAAAATaGGCTGGGAATAGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: GRVMLNQCDFELYWYHPLNAPTK*AGNSRY
Trigger: ATACCTACTATTCCCAGCCCATTTTGTAGGTGCGTT...TAGGGGGTGATACCAGTATAATTCGAAGTCACATTGGTTCAACATGACTCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394907.8
CDS-3UTR CCA 90 bp CAACAACCTTCTAATGCAGGGAAAATCTCATGCCCAACTTGGAATAAGACAAAGTTGGATGCTGGAGCCTaGGAGAAAAACCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: QQPSNAGKISCPTWNKTKLDAGA*EKNLFT
Trigger: TGTGAAGAGGTTTTTCTCCCAGGCTCCAGCATCCAA...CTTTGTCTTATTCCAAGTTGGGCATGAGATTTTCCCTGCATTAGAAGGTTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000498750.5
ENST00000562114.5
ENST00000565661.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR CCA 90 bp GGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCCCAACTTGGAATAAGAAGGTTACTTTTAGTTTaGATGCTGGAGCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: GLNNLLMQGKSHAQLGIRRLLLV*MLEPGR
Trigger: TCTCCCAGGCTCCAGCATCCAAACTAAAAGTAACCT...TCTTATTCCAAGTTGGGCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000498750.5
ENST00000562114.5
ENST00000565661.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR CCA 90 bp TTTTCATTTTGTGTACTCTGTCTCAATGTCTTACCCTCATGTGTTTGTGAAATGGACTGTGGTGGGCACTaGTACTGCTCGTCTCTACCA +
Preference number: 4 (lower is better)
Translates to: FSFCVLCLNVLPSCVCEMDCGGH*YCSSLP
Trigger: TGGTAGAGACGAGCAGTACCAGTGCCCACCACAGTC...CATTTCACAAACACATGAGGGTAAGACATTGAGACAGAGTACACAAAATGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR CCA 90 bp TTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCCCACAGCAGAATGGATTATaGTTCATGATACGAGTTACA +
Preference number: 4 (lower is better)
Translates to: FPGFRSQQPSNAGKISCPQQNGL*FMIRVT
Trigger: TGTAACTCGTATCATGAACCATAATCCATTCTGCTG...TGGGCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
CDS-3UTR CCA 90 bp AAGCAGCTAGGACTACATGCATGTGTTACCACACCTGCAAAGGAAGTAGAAGGCCAGCAGAATGGATTATaGTTCATGATACGAGTTACA +
Preference number: 4 (lower is better)
Translates to: KQLGLHACVTTPAKEVEGQQNGL*FMIRVT
Trigger: TGTAACTCGTATCATGAACCATAATCCATTCTGCTG...GCCTTCTACTTCCTTTGCAGGTGTGGTAACACATGCATGTAGTCCTAGCTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565661.5
CDS-3UTR CCA 90 bp GATTTGGTTCACTTTGACGTTTCTTCAGTGTTGTTCATGACTGTGGTGGGCACTCACCTTGCAGCAGAATaGATTATGGTTCATGATACG +
Preference number: 4 (lower is better)
Translates to: DLVHFDVSSVLFMTVVGTHLAAE*IMVHDT
Trigger: CGTATCATGAACCATAATCCATTCTGCTGCAAGGTG...AGTGCCCACCACAGTCATGAACAACACTGAAGAAACGTCAAAGTGAACCAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
CDS-3UTR CCA 90 bp CACATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGTGACTTCGAATTATACCTTAGCAGTTGCCGATaGACTGATGCACATTACAGA +
Preference number: 4 (lower is better)
Translates to: HISFLGRVMLNQCDFELYLSSCR*TDAHYR
Trigger: TCTGTAATGTGCATCAGTCCATCGGCAACTGCTAAG...GTATAATTCGAAGTCACATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR CCA 90 bp TCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCCCAACTTGGAATAAGACAGTGAACATTTGCCTCTaGTTGCTTCAGCACATCAGC +
Preference number: 4 (lower is better)
Translates to: SQQPSNAGKISCPTWNKTVNICL*LLQHIS
Trigger: GCTGATGTGCTGAAGCAACCAGAGGCAAATGTTCAC...TGTCTTATTCCAAGTTGGGCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR CCA 90 bp AGTTTTCAACGCACCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGCTACATACTACATCATaGATGAACCTTTCAGACATT +
Preference number: 4 (lower is better)
Translates to: SFQRTFPGFRSQQPSNAGLHTTS*MNLSDI
Trigger: AATGTCTGAAAGGTTCATCCATGATGTAGTATGTAG...CCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGGTGCGTTGAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461391.5
CDS-3UTR CCA 90 bp CTCTGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGTAGATTACCTATGGAGTaGGAGGAAATAATATGCAGT +
Preference number: 4 (lower is better)
Translates to: LWLLQHISFLGRVMLNQCRLPME*EEIICS
Trigger: ACTGCATATTATTTCCTCCCACTCCATAGGTAATCT...ACATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
CDS-3UTR CCA 90 bp GCAGCTAGGACTACATGCATGTGTTACCACACCTGCAAAGGAAGTAGAAGGCTCCTGTACATATGTGTGTaGTTTGAATTCTCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: AARTTCMCYHTCKGSRRLLYICV*FEFSFK
Trigger: CTTAAAGGAGAATTCAAACCACACACATATGTACAG...GAGCCTTCTACTTCCTTTGCAGGTGTGGTAACACATGCATGTAGTCCTAGCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565661.5
CDS-3UTR CCA 90 bp GCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCCCAACTTGGATCACTTCCTACAAAATaGGCTGGGAATAGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: ASGLNNLLMQGKSHAQLGSLPTK*AGNSRY
Trigger: ATACCTACTATTCCCAGCCCATTTTGTAGGAAGTGA...TCCAAGTTGGGCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000472094.5
ENST00000498750.5
ENST00000562114.5
ENST00000567126.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR CCA 90 bp CTCTTCACAACGAGCTCCTGTATAGTTTTCAACGCACCTTCCCAGGCTTCAGGTACTGGTTCTCTTTTATaGTTCACCACTATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LFTTSSCIVFNAPSQASGTGSLL*FTTISS
Trigger: AGAAGAAATAGTGGTGAACCATAAAAGAGAACCAGT...ACCTGAAGCCTGGGAAGGTGCGTTGAAAACTATACAGGAGCTCGTTGTGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565661.5
ENST00000567126.5
3UTR CAA 72 bp TTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTaGAACCAATGTGACTTCGAATTATACTGGTATCAC +
Preference number: 4 (lower is better)
Translates to: LLQHISFLGRVM*NQCDFELYWYH
Trigger: GTGATACCAGTATAATTCGAAGTCACATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR TCA 90 bp CTTCCTTTGAGAGACAGATCCTTGAAATCAGTCACTTCTAGTAGAAAGCATTTTACTGAACTGGCTCTCTaGAAGTGGCCTTTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: LPLRDRSLKSVTSSRKHFTELAL*KWPFLQ
Trigger: TTGCAGGAAAGGCCACTTTCAGAGAGCCAGTTCAGT...AAAATGCTTTCTACTAGAAGTGACTGATTTCAAGGATCTGTCTCTCAAAGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000568073.5
CDS-3UTR TCA 90 bp GTGTGGTTTGAATTCTCCTTTAAGCCAGTTGTGACATCTATTGGTTCCCTCATTTCGTCTCTACCAGGTTaGTATCATACTGGACTGAAC +
Preference number: 4 (lower is better)
Translates to: VWFEFSFKPVVTSIGSLISSLPG*YHTGLN
Trigger: GTTCAGTCCAGTATGATATCAACCTGGTAGAGACGA...AATGAGGGAACCAATAGATGTCACAACTGGCTTAAAGGAGAATTCAAACCACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000565661.5
CDS-3UTR TCA 90 bp CTGATGCACATTACAGAAGCACACACACCTTGCAGCAGAATGGATTATGGTTCAATGGATTATGGTTCATaGTACGAGTTACACAAGCGT +
Preference number: 4 (lower is better)
Translates to: LMHITEAHTPCSRMDYGSMDYGS*YELHKR
Trigger: ACGCTTGTGTAACTCGTATCATGAACCATAATCCAT...TGAACCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCTGTAATGTGCATCAG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
CDS-3UTR TCA 90 bp CTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGTGACTTCGAACAAATACCCAACAGATaGATGGATAGACAAAATGTG +
Preference number: 4 (lower is better)
Translates to: LQHISFLGRVMLNQCDFEQIPNR*MDRQNV
Trigger: CACATTTTGTCTATCCATTCATCTGTTGGGTATTTG...TTCGAAGTCACATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
CDS-3UTR GCA 90 bp AAACTGGGTATGAGTTGGCTTAATGAAAATCCTAGTGGTGTTTCATTTTCTGCCGAAAGTGGCCTTTCCTaGAAAGGAAGTAGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: KLGMSWLNENPSGVSFSAESGLS*KGSRRL
Trigger: GAGCCTTCTACTTCCTTTGCAGGAAAGGCCACTTTC...GGCAGAAAATGAAACACCACTAGGATTTTCATTAAGCCAACTCATACCCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566417.5
CDS-3UTR GCA 90 bp CACATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGTGACTTCGAATTATACCCCAGACCTTTCCACTaGTCCAAGACTTTATTTTCA +
Preference number: 4 (lower is better)
Translates to: HISFLGRVMLNQCDFELYPRPFH*SKTLFS
Trigger: TGAAAATAAAGTCTTGGAGCAGTGGAAAGGTCTGGG...GTATAATTCGAAGTCACATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR GCA 90 bp ACAAAAGCTTCAAACAGGTTACTTTTAGTTTGGATGCTGGAGCCTGGGAGAAAATTAGTAAAGACTGGTTaGCAGAGGTTCAGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: TKASNRLLLVWMLEPGRKLVKTG*QRFSGR
Trigger: TCTCCCACTGAACCTCTGGCAACCAGTCTTTACTAA...TTTTCTCCCAGGCTCCAGCATCCAAACTAAAAGTAACCTGTTTGAAGCTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000472094.5
CDS-3UTR GCA 90 bp CCAATGATAAGTGTTACTAGGACCGCCAATGCCACAAAAGCTTCAAACAGGTTAGCAGGGAAAATCTCATaGCCAACTTGGAATAAGACA +
Preference number: 4 (lower is better)
Translates to: PMISVTRTANATKASNRLAGKIS*PTWNKT
Trigger: TGTCTTATTCCAAGTTGGGCATGAGATTTTCCCTGC...TAACCTGTTTGAAGCTTTTGTGGCATTGGCGGTCCTAGTAACACTTATCATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000498750.5
ENST00000562114.5
ENST00000565661.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR GCA 90 bp CACATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGTGACTTCGAATTATACGCAGGGAAAATCTCATaGCCAACTTGGAATAAGACA +
Preference number: 4 (lower is better)
Translates to: HISFLGRVMLNQCDFELYAGKIS*PTWNKT
Trigger: TGTCTTATTCCAAGTTGGGCATGAGATTTTCCCTGC...GTATAATTCGAAGTCACATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR CCA 90 bp AAACTGGGTATGAGTTGGCTTAATGAAAATCCTAGTGGTGTTTCATTTTCTGCCTTGGATGCTGGAGCCTaGGAGAAAAACCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: KLGMSWLNENPSGVSFSALDAGA*EKNLFT
Trigger: TGTGAAGAGGTTTTTCTCCCAGGCTCCAGCATCCAA...GGCAGAAAATGAAACACCACTAGGATTTTCATTAAGCCAACTCATACCCAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566417.5
CDS-3UTR CCA 90 bp TCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCCCAACTTGGAATAAGACAAGGTTACTTTTAGTTTaGATGCTGGAGCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SQQPSNAGKISCPTWNKTRLLLV*MLEPGR
Trigger: TCTCCCAGGCTCCAGCATCCAAACTAAAAGTAACCT...TGTCTTATTCCAAGTTGGGCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000498750.5
ENST00000562114.5
ENST00000565661.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR CCA 90 bp AAACTGGGTATGAGTTGGCTTAATGAAAATCCTAGTGGTGTTTCATTTTCTGCCCATACTGGACTGAACTaGCTCTCTGAAAGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: KLGMSWLNENPSGVSFSAHTGLN*LSESGL
Trigger: AAGGCCACTTTCAGAGAGCCAGTTCAGTCCAGTATG...GGCAGAAAATGAAACACCACTAGGATTTTCATTAAGCCAACTCATACCCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566417.5
CDS-3UTR CCA 90 bp ACAAAAGCTTCAAACAGGTTACTTTTAGTTTGGATGCTGGAGCCTGGGAGAAAACTTAGCAGTTGCCGATaGACTGATGCACATTACAGA +
Preference number: 4 (lower is better)
Translates to: TKASNRLLLVWMLEPGRKLSSCR*TDAHYR
Trigger: TCTGTAATGTGCATCAGTCCATCGGCAACTGCTAAG...TTTTCTCCCAGGCTCCAGCATCCAAACTAAAAGTAACCTGTTTGAAGCTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR CCA 90 bp TGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGTGACCTACATACTACATCATaGATGAACCTTTCAGACATT +
Preference number: 4 (lower is better)
Translates to: WLLQHISFLGRVMLNQCDLHTTS*MNLSDI
Trigger: AATGTCTGAAAGGTTCATCCATGATGTAGTATGTAG...GTCACATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
CDS-3UTR CCA 90 bp CTCTGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGTTCATTAACTACAAAATaGGCTGGGAATAGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: LWLLQHISFLGRVMLNQCSLTTK*AGNSRY
Trigger: ATACCTACTATTCCCAGCCCATTTTGTAGTTAATGA...ACATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000565661.5
CDS-3UTR CCA 90 bp GCCTGGGAGAAAAACCTCTTCACAACGAGCTCCTGTATAGTTTTCAACGCACCTCTGTACATATGTGTGTaGTTTGAATTCTCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: AWEKNLFTTSSCIVFNAPLYICV*FEFSFK
Trigger: CTTAAAGGAGAATTCAAACCACACACATATGTACAG...AGGTGCGTTGAAAACTATACAGGAGCTCGTTGTGAAGAGGTTTTTCTCCCAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000565661.5
CDS-3UTR CCA 90 bp TATAGTTTTCAACGCACCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAATCTCATGCCCAACTTaGAATAAGACAAAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: YSFQRTFPGFRSQQPSNAISCPT*NKTKRS
Trigger: GCTTCTCTTTGTCTTATTCCAAGTTGGGCATGAGAT...TGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGGTGCGTTGAAAACTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000498750.5
ENST00000562114.5
ENST00000565661.5
ENST00000567126.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR CCA 90 bp ACACACACCTTGCAGCAGAATGGATTATGGTTCATGATACGAGTTACACAAGCGTCACTTCCTACAAAATaGGCTGGGAATAGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: THTLQQNGLWFMIRVTQASLPTK*AGNSRY
Trigger: ATACCTACTATTCCCAGCCCATTTTGTAGGAAGTGA...CGCTTGTGTAACTCGTATCATGAACCATAATCCATTCTGCTGCAAGGTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472094.5
ENST00000562114.5
CDS-3UTR TCA 90 bp AAACTGGGTATGAGTTGGCTTAATGAAAATCCTAGTGGTGTTTCATTTTCTGCCTCGTCTCTACCAGGTTaGTATCATACTGGACTGAAC +
Preference number: 4 (lower is better)
Translates to: KLGMSWLNENPSGVSFSASSLPG*YHTGLN
Trigger: GTTCAGTCCAGTATGATATCAACCTGGTAGAGACGA...GGCAGAAAATGAAACACCACTAGGATTTTCATTAAGCCAACTCATACCCAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566417.5
CDS-3UTR TCA 90 bp ACAATCCTAAATTTCCAGTTACTTGCACCTAGAATTAGTCAATCTTTTGCAGTCCTTCAGTGTTGTTCATaGCTGTGGTGGGCACTGGTA +
Preference number: 4 (lower is better)
Translates to: TILNFQLLAPRISQSFAVLQCCS*LWWALV
Trigger: TACCAGTGCCCACCACAGTCATGAACAACACTGAAG...GACTGCAAAAGATTGACTAATTCTAGGTGCAAGTAACTGGAAATTTAGGATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR TCA 90 bp TTTCTTCCTTTGAGAGACAGATCCTTGAAATCAGTCACTTCTAGTAGAAAGCATTTCTCTCTAGGTGTGTaGACATTTGCCTCTGGTTGC +
Preference number: 4 (lower is better)
Translates to: FLPLRDRSLKSVTSSRKHFSLGV*TFASGC
Trigger: GCAACCAGAGGCAAATGTTCACACACCTAGAGAGAA...ATGCTTTCTACTAGAAGTGACTGATTTCAAGGATCTGTCTCTCAAAGGAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000568073.5
CDS-3UTR TCA 90 bp ACACACACCTTGCAGCAGAATGGATTATGGTTCATGATACGAGTTACACAAGCGCAAATACCCAACAGATaGATGGATAGACAAAATGTG +
Preference number: 4 (lower is better)
Translates to: THTLQQNGLWFMIRVTQAQIPNR*MDRQNV
Trigger: CACATTTTGTCTATCCATTCATCTGTTGGGTATTTG...CGCTTGTGTAACTCGTATCATGAACCATAATCCATTCTGCTGCAAGGTGTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
CDS-3UTR GCA 90 bp CATGCACTAAAAATTACAAGGGAAATAGGTTTGGAACTTTGTGACCTGTGTAGTGAAAGTGGCCTTTCCTaGAAAGGAAGTAGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: HALKITREIGLELCDLCSESGLS*KGSRRL
Trigger: GAGCCTTCTACTTCCTTTGCAGGAAAGGCCACTTTC...ACTACACAGGTCACAAAGTTCCAAACCTATTTCCCTTGTAATTTTTAGTGCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR GCA 90 bp TCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCCCAACTTGGAATAAGACAGCAGGGAAAATCTCATaGCCAACTTGGAATAAGACA +
Preference number: 4 (lower is better)
Translates to: SQQPSNAGKISCPTWNKTAGKIS*PTWNKT
Trigger: TGTCTTATTCCAAGTTGGGCATGAGATTTTCCCTGC...TGTCTTATTCCAAGTTGGGCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000498750.5
ENST00000562114.5
ENST00000565661.5
ENST00000567126.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR GCA 90 bp CAACAACCTTCTAATGCAGGGAAAATCTCATGCCCAACTTGGAATAAGACAAAGGCAGGGAAAATCTCATaGCCAACTTGGAATAAGACA +
Preference number: 4 (lower is better)
Translates to: QQPSNAGKISCPTWNKTKAGKIS*PTWNKT
Trigger: TGTCTTATTCCAAGTTGGGCATGAGATTTTCCCTGC...CTTTGTCTTATTCCAAGTTGGGCATGAGATTTTCCCTGCATTAGAAGGTTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000498750.5
ENST00000562114.5
ENST00000565661.5
ENST00000567126.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR GCA 90 bp ACAAAAGCTTCAAACAGGTTACTTTTAGTTTGGATGCTGGAGCCTGGGAGAAAAGCAGGGAAAATCTCATaGCCAACTTGGAATAAGACA +
Preference number: 4 (lower is better)
Translates to: TKASNRLLLVWMLEPGRKAGKIS*PTWNKT
Trigger: TGTCTTATTCCAAGTTGGGCATGAGATTTTCCCTGC...TTTTCTCCCAGGCTCCAGCATCCAAACTAAAAGTAACCTGTTTGAAGCTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000498750.5
ENST00000562114.5
ENST00000565661.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR CCA 90 bp GAACTTTGTGACCTGTGTAGTACAATAACAATCCTAAATTTCCAGTTACTTGCAAAAACGACTTGTGACTaGGACCACAGGGCTCTTCGT +
Preference number: 4 (lower is better)
Translates to: ELCDLCSTITILNFQLLAKTTCD*DHRALR
Trigger: ACGAAGAGCCCTGTGGTCCCAGTCACAAGTCGTTTT...TGCAAGTAACTGGAAATTTAGGATTGTTATTGTACTACACAGGTCACAAAGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR CCA 90 bp AAACTGGGTATGAGTTGGCTTAATGAAAATCCTAGTGGTGTTTCATTTTCTGCCAGGTTACTTTTAGTTTaGATGCTGGAGCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: KLGMSWLNENPSGVSFSARLLLV*MLEPGR
Trigger: TCTCCCAGGCTCCAGCATCCAAACTAAAAGTAACCT...GGCAGAAAATGAAACACCACTAGGATTTTCATTAAGCCAACTCATACCCAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566417.5
CDS-3UTR CCA 90 bp GGGAGAGTCATGTTGAACCAATGTGACTTCGAATTATACTGGTATCACCCCCTACAGCAGAATGGATTATaGTTCATGATACGAGTTACA +
Preference number: 4 (lower is better)
Translates to: GRVMLNQCDFELYWYHPLQQNGL*FMIRVT
Trigger: TGTAACTCGTATCATGAACCATAATCCATTCTGCTG...TAGGGGGTGATACCAGTATAATTCGAAGTCACATTGGTTCAACATGACTCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
CDS-3UTR CCA 90 bp TATAGTTTTCAACGCACCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAAAAACACACAAGTGTTaGCAAGGATGTGGAGAAATT +
Preference number: 4 (lower is better)
Translates to: YSFQRTFPGFRSQQPSNAKTHKC*QGCGEI
Trigger: AATTTCTCCACATCCTTGCCAACACTTGTGTGTTTT...TGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGGTGCGTTGAAAACTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461391.5
CDS-3UTR CCA 90 bp ACACACACCTTGCAGCAGAATGGATTATGGTTCATGATACGAGTTACACAAGCGAGATTACCTATGGAGTaGGAGGAAATAATATGCAGT +
Preference number: 4 (lower is better)
Translates to: THTLQQNGLWFMIRVTQARLPME*EEIICS
Trigger: ACTGCATATTATTTCCTCCCACTCCATAGGTAATCT...CGCTTGTGTAACTCGTATCATGAACCATAATCCATTCTGCTGCAAGGTGTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
CDS-3UTR CCA 90 bp GGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCCCAACTTGGAATAAGAATCTCATGCCCAACTTaGAATAAGACAAAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: GLNNLLMQGKSHAQLGIRISCPT*NKTKRS
Trigger: GCTTCTCTTTGTCTTATTCCAAGTTGGGCATGAGAT...TCTTATTCCAAGTTGGGCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000498750.5
ENST00000562114.5
ENST00000565661.5
ENST00000567126.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR TCA 90 bp ATTTCTGGGTATATACACAAAATAATTGAAAGCGGAGGCTTGAGGGTATATTTGTTCTCTCTAGGTGTGTaGACATTTGCCTCTGGTTGC +
Preference number: 4 (lower is better)
Translates to: ISGYIHKIIESGGLRVYLFSLGV*TFASGC
Trigger: GCAACCAGAGGCAAATGTTCACACACCTAGAGAGAA...CAAATATACCCTCAAGCCTCCGCTTTCAATTATTTTGTGTATATACCCAGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
CDS-3UTR TCA 90 bp CATGCACTAAAAATTACAAGGGAAATAGGTTTGGAACTTTGTGACCTGTGTAGTACACTAGTGACCCACTaGATTCACAGCACTTACACT +
Preference number: 4 (lower is better)
Translates to: HALKITREIGLELCDLCSTLVTH*IHSTYT
Trigger: AGTGTAAGTGCTGTGAATTCAGTGGGTCACTAGTGT...ACTACACAGGTCACAAAGTTCCAAACCTATTTCCCTTGTAATTTTTAGTGCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR GCA 90 bp GCACATTACAGAAGCACACACACCTTGCAGCAGAATGGATTATGGTTCATGATATTTTTCATCAGTACTTaGAGCTTCTCAGATAACAGC +
Preference number: 4 (lower is better)
Translates to: AHYRSTHTLQQNGLWFMIFFIST*SFSDNS
Trigger: GCTGTTATCTGAGAAGCTGCAAGTACTGATGAAAAA...TATCATGAACCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCTGTAATGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000565661.5
CDS-3UTR GCA 90 bp ATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGTGACTTCGAATTATACTGGTTTTTCATCAGTACTTaGAGCTTCTCAGATAACAGC +
Preference number: 4 (lower is better)
Translates to: ISFLGRVMLNQCDFELYWFFIST*SFSDNS
Trigger: GCTGTTATCTGAGAAGCTGCAAGTACTGATGAAAAA...CCAGTATAATTCGAAGTCACATTGGTTCAACATGACTCTCCCCAGAAAGCTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR CCA 90 bp AAACTGGGTATGAGTTGGCTTAATGAAAATCCTAGTGGTGTTTCATTTTCTGCCAACGCACCTACAAAATaGGCTGGGAATAGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: KLGMSWLNENPSGVSFSANAPTK*AGNSRY
Trigger: ATACCTACTATTCCCAGCCCATTTTGTAGGTGCGTT...GGCAGAAAATGAAACACCACTAGGATTTTCATTAAGCCAACTCATACCCAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566417.5
CDS-3UTR CCA 90 bp GCACATTACAGAAGCACACACACCTTGCAGCAGAATGGATTATGGTTCATGATACAGCAGAATGGATTATaGTTCATGATACGAGTTACA +
Preference number: 4 (lower is better)
Translates to: AHYRSTHTLQQNGLWFMIQQNGL*FMIRVT
Trigger: TGTAACTCGTATCATGAACCATAATCCATTCTGCTG...TATCATGAACCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCTGTAATGTGC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
3UTR CAA 72 bp TCTGGGTATATACACAAAATAATTGAAAGCGGAGGCTaGAGGGTATATTTGTATACCAGTGTTCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: SGYIHKIIESGG*RVYLYTSVHCS
Trigger: GCTGCAGTGAACACTGGTATACAAATATACCCTCAAGCCTCCGCTTTCAATTATTTTGTGTATATACCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
CDS-3UTR TCA 90 bp ACCTTGCAGCAGAATGGATTATGGTTCATGATACGAGTTACACAAGCGTTTTATAGACAACAGCAGCTGTaGCTTGCATTTTATAACATG +
Preference number: 4 (lower is better)
Translates to: TLQQNGLWFMIRVTQAFYRQQQL*LAFYNM
Trigger: CATGTTATAAAATGCAAGTCACAGCTGCTGTTGTCT...ATAAAACGCTTGTGTAACTCGTATCATGAACCATAATCCATTCTGCTGCAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000562114.5
CDS-3UTR TCA 90 bp GAACTTTGTGACCTGTGTAGTACAATAACAATCCTAAATTTCCAGTTACTTGCAACACTAGTGACCCACTaGATTCACAGCACTTACACT +
Preference number: 4 (lower is better)
Translates to: ELCDLCSTITILNFQLLATLVTH*IHSTYT
Trigger: AGTGTAAGTGCTGTGAATTCAGTGGGTCACTAGTGT...TGCAAGTAACTGGAAATTTAGGATTGTTATTGTACTACACAGGTCACAAAGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR TCA 90 bp AAACTGGGTATGAGTTGGCTTAATGAAAATCCTAGTGGTGTTTCATTTTCTGCCAAAGGTATCTTGGTATaGGAGAGAATGCCAACTACA +
Preference number: 4 (lower is better)
Translates to: KLGMSWLNENPSGVSFSAKGILV*ERMPTT
Trigger: TGTAGTTGGCATTCTCTCTCATACCAAGATACCTTT...GGCAGAAAATGAAACACCACTAGGATTTTCATTAAGCCAACTCATACCCAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566417.5
CDS-3UTR GCA 90 bp CATGCACTAAAAATTACAAGGGAAATAGGTTTGGAACTTTGTGACCTGTGTAGTCCCAGACCTTTCCACTaGTCCAAGACTTTATTTTCA +
Preference number: 4 (lower is better)
Translates to: HALKITREIGLELCDLCSPRPFH*SKTLFS
Trigger: TGAAAATAAAGTCTTGGAGCAGTGGAAAGGTCTGGG...ACTACACAGGTCACAAAGTTCCAAACCTATTTCCCTTGTAATTTTTAGTGCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR CCA 90 bp ACAATCCTAAATTTCCAGTTACTTGCACCTAGAATTAGTCAATCTTTTGCAGTCAGGTTACTTTTAGTTTaGATGCTGGAGCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: TILNFQLLAPRISQSFAVRLLLV*MLEPGR
Trigger: TCTCCCAGGCTCCAGCATCCAAACTAAAAGTAACCT...GACTGCAAAAGATTGACTAATTCTAGGTGCAAGTAACTGGAAATTTAGGATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR CCA 90 bp ACATTACAGAAGCACACACACCTTGCAGCAGAATGGATTATGGTTCATGATACGTCATTAACTACAAAATaGGCTGGGAATAGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: TLQKHTHLAAEWIMVHDTSLTTK*AGNSRY
Trigger: ATACCTACTATTCCCAGCCCATTTTGTAGTTAATGA...CGTATCATGAACCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCTGTAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000565661.5
CDS-3UTR CCA 90 bp CCAATGATAAGTGTTACTAGGACCGCCAATGCCACAAAAGCTTCAAACAGGTTAACTGGTTCTCTTTTATaGTTCACCACTATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PMISVTRTANATKASNRLTGSLL*FTTISS
Trigger: AGAAGAAATAGTGGTGAACCATAAAAGAGAACCAGT...TAACCTGTTTGAAGCTTTTGTGGCATTGGCGGTCCTAGTAACACTTATCATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565661.5
CDS-3UTR CCA 90 bp AAACTGGGTATGAGTTGGCTTAATGAAAATCCTAGTGGTGTTTCATTTTCTGCCCCTCAAAAGGTATCTTaGTATGAGAGAGAATGCCAA +
Preference number: 4 (lower is better)
Translates to: KLGMSWLNENPSGVSFSAPQKVS*YERECQ
Trigger: TTGGCATTCTCTCTCATACCAAGATACCTTTTGAGG...GGCAGAAAATGAAACACCACTAGGATTTTCATTAAGCCAACTCATACCCAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000566417.5
CDS-3UTR TCA 90 bp TTTTCATTTTGTGTACTCTGTCTCAATGTCTTACCCTCATGTGTTTGTGAAATGTTGAAAGCGGAGGCTTaGGGGTATATTTGTATACCA +
Preference number: 4 (lower is better)
Translates to: FSFCVLCLNVLPSCVCEMLKAEA*GYICIP
Trigger: TGGTATACAAATATACCCTCAAGCCTCCGCTTTCAA...CATTTCACAAACACATGAGGGTAAGACATTGAGACAGAGTACACAAAATGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
CDS-3UTR CCA 90 bp GAACTTTGTGACCTGTGTAGTACAATAACAATCCTAAATTTCCAGTTACTTGCACACCTTGCAGCAGAATaGATTATGGTTCATGATACG +
Preference number: 4 (lower is better)
Translates to: ELCDLCSTITILNFQLLAHLAAE*IMVHDT
Trigger: CGTATCATGAACCATAATCCATTCTGCTGCAAGGTG...TGCAAGTAACTGGAAATTTAGGATTGTTATTGTACTACACAGGTCACAAAGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR TCA 90 bp GAACTTTGTGACCTGTGTAGTACAATAACAATCCTAAATTTCCAGTTACTTGCAATGGATTATGGTTCATaGTACGAGTTACACAAGCGT +
Preference number: 4 (lower is better)
Translates to: ELCDLCSTITILNFQLLAMDYGS*YELHKR
Trigger: ACGCTTGTGTAACTCGTATCATGAACCATAATCCAT...TGCAAGTAACTGGAAATTTAGGATTGTTATTGTACTACACAGGTCACAAAGTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR GCA 90 bp CTTCCTTTGAGAGACAGATCCTTGAAATCAGTCACTTCTAGTAGAAAGCATTTTTTTTTCATCAGTACTTaGAGCTTCTCAGATAACAGC +
Preference number: 4 (lower is better)
Translates to: LPLRDRSLKSVTSSRKHFFFIST*SFSDNS
Trigger: GCTGTTATCTGAGAAGCTGCAAGTACTGATGAAAAA...AAAATGCTTTCTACTAGAAGTGACTGATTTCAAGGATCTGTCTCTCAAAGGAAG
37% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000568073.5
CDS-3UTR CCA 90 bp AAACTGGGTATGAGTTGGCTTAATGAAAATCCTAGTGGTGTTTCATTTTCTGCCAAACTGGGTATGAGTTaGCTTAATGAAAATCCTAGT +
Preference number: 4 (lower is better)
Translates to: KLGMSWLNENPSGVSFSAKLGMS*LNENPS
Trigger: ACTAGGATTTTCATTAAGCCAACTCATACCCAGTTT...GGCAGAAAATGAAACACCACTAGGATTTTCATTAAGCCAACTCATACCCAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566417.5
CDS-3UTR CAA 90 bp AGTGCAGTAGTGCAGTCATGGCTTAACTGCAGCCTCTCATTCCTGGGCTCAAGCGACGTTTCTTCAGTGTaGTTCATGACTGTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: SAVVQSWLNCSLSFLGSSDVSSV*FMTVVG
Trigger: GCCCACCACAGTCATGAACAACACTGAAGAAACGTC...GCTTGAGCCCAGGAATGAGAGGCTGCAGTTAAGCCATGACTGCACTACTGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565661.5
CDS-3UTR CAA 90 bp TTTAGTTTGGATGCTGGAGCCTGGGAGAAAAACCTCTTCACAACGAGCTCCTGTGACAGGCTGTTAGGTTaGGCCGGTGCATGCCCTTCT +
Preference number: 5 (lower is better)
Translates to: FSLDAGAWEKNLFTTSSCDRLLG*AGACPS
Trigger: AGAAGGGCATGCACCGGCCAAACCTAACAGCCTGTC...ACAGGAGCTCGTTGTGAAGAGGTTTTTCTCCCAGGCTCCAGCATCCAAACTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000472094.5
CDS-3UTR CAA 90 bp TTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCCCAGACAGGCTGTTAGGTTaGGCCGGTGCATGCCCTTCT +
Preference number: 5 (lower is better)
Translates to: FPGFRSQQPSNAGKISCPDRLLG*AGACPS
Trigger: AGAAGGGCATGCACCGGCCAAACCTAACAGCCTGTC...TGGGCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000472094.5
CDS-3UTR CAA 90 bp AGGAGTGCAGTAGTGCAGTCATGGCTTAACTGCAGCCTCTCATTCCTGGGCTCACTCGTCTCTACCAGGTaGATATCATACTGGACTGAA +
Preference number: 5 (lower is better)
Translates to: RSAVVQSWLNCSLSFLGSLVSTR*ISYWTE
Trigger: TTCAGTCCAGTATGATATCAACCTGGTAGAGACGAG...TGAGCCCAGGAATGAGAGGCTGCAGTTAAGCCATGACTGCACTACTGCACTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563204.5
ENST00000565661.5
CDS-3UTR CAA 90 bp CCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCCGACGTTTCTTCAGTGTaGTTCATGACTGTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: PSQASGLNNLLMQGKSHADVSSV*FMTVVG
Trigger: GCCCACCACAGTCATGAACAACACTGAAGAAACGTC...GGCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR CAA 90 bp GCAGTTGCCGATGGACTGATGCACATTACAGAAGCACACACACCTTGCAGCAGAAGAAGCACACACACCTaGCAGCAGAATGGATTATGG +
Preference number: 5 (lower is better)
Translates to: AVADGLMHITEAHTPCSRRSTHT*QQNGLW
Trigger: CCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCT...TCTGCTGCAAGGTGTGTGTGCTTCTGTAATGTGCATCAGTCCATCGGCAACTGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
CDS-3UTR CAA 90 bp CTTGACGAGGACATAGTTCAGAGACAGGCTGTTAGGTTTGGCCGGTGCATGCCCATTGAAAGCGGAGGCTaGAGGGTATATTTGTATACC +
Preference number: 5 (lower is better)
Translates to: LDEDIVQRQAVRFGRCMPIESGG*RVYLYT
Trigger: GGTATACAAATATACCCTCAAGCCTCCGCTTTCAAT...GGGCATGCACCGGCCAAACCTAACAGCCTGTCTCTGAACTATGTCCTCGTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
CDS-3UTR CAA 90 bp AGTTTTCAACGCACCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGAGAAGCACACACACCTaGCAGCAGAATGGATTATGG +
Preference number: 5 (lower is better)
Translates to: SFQRTFPGFRSQQPSNAGRSTHT*QQNGLW
Trigger: CCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCT...CCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGGTGCGTTGAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
CDS-3UTR CAA 90 bp TGCATGCCCTTCTGCCTAAGCCATTTACCAGCCCCAGACCTTTCCACTGCTCCATTGAGAGACAGATCCTaGAAATCAGTCACTTCTAGT +
Preference number: 5 (lower is better)
Translates to: CMPFCLSHLPAPDLSTAPLRDRS*KSVTSS
Trigger: ACTAGAAGTGACTGATTTCAAGGATCTGTCTCTCAA...TGGAGCAGTGGAAAGGTCTGGGGCTGGTAAATGGCTTAGGCAGAAGGGCATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR CAA 90 bp GACCCACTGAATTCACAGCACTTACACTGGGCCAGACTGTGTAGAGAAGCCAGCGGGAATGGGAATTTATaGTTTAAGGGGCACAGAGAT +
Preference number: 5 (lower is better)
Translates to: DPLNSQHLHWARLCREASGNGNL*FKGHRD
Trigger: ATCTCTGTGCCCCTTAAACAATAAATTCCCATTCCC...GCTGGCTTCTCTACACAGTCTGGCCCAGTGTAAGTGCTGTGAATTCAGTGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
CDS-3UTR CAA 90 bp CGCACCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCTCACTCGTCTCTACCAGGTaGATATCATACTGGACTGAA +
Preference number: 5 (lower is better)
Translates to: RTFPGFRSQQPSNAGKISLVSTR*ISYWTE
Trigger: TTCAGTCCAGTATGATATCAACCTGGTAGAGACGAG...TGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGGTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR CAA 90 bp CATTTGCCTCTGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAAAGAAGCACACACACCTaGCAGCAGAATGGATTATGG +
Preference number: 5 (lower is better)
Translates to: HLPLVASAHQLSGESHVERSTHT*QQNGLW
Trigger: CCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCT...TTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCAGAGGCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
CDS-3UTR CAA 90 bp CAACGCACCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCAACATTTGCCTCTGGTaGCTTCAGCACATCAGCTTT +
Preference number: 5 (lower is better)
Translates to: QRTFPGFRSQQPSNAGKINICLW*LQHISF
Trigger: AAAGCTGATGTGCTGAAGCAACCAGAGGCAAATGTT...GATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGGTGCGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR CAA 90 bp TGGGCACTGGTACTGCTCGTCTCTACCAGGTTGATATCATACTGGACTGAACTGAACATTTGCCTCTGGTaGCTTCAGCACATCAGCTTT +
Preference number: 5 (lower is better)
Translates to: WALVLLVSTRLISYWTELNICLW*LQHISF
Trigger: AAAGCTGATGTGCTGAAGCAACCAGAGGCAAATGTT...CAGTTCAGTCCAGTATGATATCAACCTGGTAGAGACGAGCAGTACCAGTGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR CAA 90 bp AGCTTTCTGGGGAGAGTCATGTTGAACCAATGTGACTTCGAATTATACTGGTATGACAGGCTGTTAGGTTaGGCCGGTGCATGCCCTTCT +
Preference number: 5 (lower is better)
Translates to: SFLGRVMLNQCDFELYWYDRLLG*AGACPS
Trigger: AGAAGGGCATGCACCGGCCAAACCTAACAGCCTGTC...ATACCAGTATAATTCGAAGTCACATTGGTTCAACATGACTCTCCCCAGAAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR CAA 90 bp ATTTGCCTCTGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACTGGGTGATGAATGAATaGGTGACACTAGTGACCCAC +
Preference number: 5 (lower is better)
Translates to: ICLWLLQHISFLGRVMLNWVMNE*VTLVTH
Trigger: GTGGGTCACTAGTGTCACCAATTCATTCATCACCCA...GTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCAGAGGCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR CAA 90 bp GACATTCTGGAGAAAGCAAAGTTAGTAAAGACTGGTTGCCAGAGGTTCAGTGGGGTTAGTAAAGACTGGTaGCCAGAGGTTCAGTGGGAG +
Preference number: 5 (lower is better)
Translates to: DILEKAKLVKTGCQRFSGVSKDW*PEVQWE
Trigger: CTCCCACTGAACCTCTGGCAACCAGTCTTTACTAAC...CCCACTGAACCTCTGGCAACCAGTCTTTACTAACTTTGCTTTCTCCAGAATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR CAA 90 bp AGTCATGGCTTAACTGCAGCCTCTCATTCCTGGGCTCAAGCGATCTTCCCATCTGTGTTTCAAAAGTTTTaGAATACCGCAGACAACAGC +
Preference number: 5 (lower is better)
Translates to: SHGLTAASHSWAQAIFPSVFQKF*NTADNS
Trigger: GCTGTTGTCTGCGGTATTCAAAAACTTTTGAAACAC...AGATGGGAAGATCGCTTGAGCCCAGGAATGAGAGGCTGCAGTTAAGCCATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563204.5
CDS-3UTR CAA 90 bp GCACCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATCTCGTCTCTACCAGGTaGATATCATACTGGACTGAA +
Preference number: 5 (lower is better)
Translates to: APSQASGLNNLLMQGKSHLVSTR*ISYWTE
Trigger: TTCAGTCCAGTATGATATCAACCTGGTAGAGACGAG...ATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR CAA 90 bp ACCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCCTCGTCTCTACCAGGTaGATATCATACTGGACTGAA +
Preference number: 5 (lower is better)
Translates to: TFPGFRSQQPSNAGKISCLVSTR*ISYWTE
Trigger: TTCAGTCCAGTATGATATCAACCTGGTAGAGACGAG...GCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR CAA 90 bp CCTCTGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGAAAATGGCAAAGGATTaGGATAGATCTCCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: PLVASAHQLSGESHVEPMKMAKD*DRSPER
Trigger: CCTCTCTGGAGATCTATCCAAATCCTTTGCCATTTT...CATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
CDS-3UTR CAA 90 bp TGGTGGGCACTGGTACTGCTCGTCTCTACCAGGTTGATATCATACTGGACTGAAGTCAAGAGAGTAGGGTaGAAAAACAGTACCCTCAAT +
Preference number: 5 (lower is better)
Translates to: WWALVLLVSTRLISYWTEVKRVG*KNSTLN
Trigger: ATTGAGGGTACTGTTTTTCAACCCTACTCTCTTGAC...TTCAGTCCAGTATGATATCAACCTGGTAGAGACGAGCAGTACCAGTGCCCACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000562114.5
CDS-3UTR CAA 90 bp CATTCTGGAGAAAGCAAAGTTAGTAAAGACTGGTTGCCAGAGGTTCAGTGGGAGCTCGTCTCTACCAGGTaGATATCATACTGGACTGAA +
Preference number: 5 (lower is better)
Translates to: HSGESKVSKDWLPEVQWELVSTR*ISYWTE
Trigger: TTCAGTCCAGTATGATATCAACCTGGTAGAGACGAG...CTCCCACTGAACCTCTGGCAACCAGTCTTTACTAACTTTGCTTTCTCCAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR CAA 90 bp CACATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGTGACTTCGAATTATACGACGTTTCTTCAGTGTaGTTCATGACTGTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: HISFLGRVMLNQCDFELYDVSSV*FMTVVG
Trigger: GCCCACCACAGTCATGAACAACACTGAAGAAACGTC...GTATAATTCGAAGTCACATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR CAA 90 bp TCAGTGTTGTTCATGACTGTGGTGGGCACTGGTACTGCTCGTCTCTACCAGGTTATGATTTGGTTCACTTaGACGTTTCTTCAGTGTTGT +
Preference number: 5 (lower is better)
Translates to: SVLFMTVVGTGTARLYQVMIWFT*TFLQCC
Trigger: ACAACACTGAAGAAACGTCAAAGTGAACCAAATCAT...AACCTGGTAGAGACGAGCAGTACCAGTGCCCACCACAGTCATGAACAACACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR CAA 90 bp GATTTGGTTCACTTTGACGTTTCTTCAGTGTTGTTCATGACTGTGGTGGGCACTAGAAGCACACACACCTaGCAGCAGAATGGATTATGG +
Preference number: 5 (lower is better)
Translates to: DLVHFDVSSVLFMTVVGTRSTHT*QQNGLW
Trigger: CCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCT...AGTGCCCACCACAGTCATGAACAACACTGAAGAAACGTCAAAGTGAACCAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
CDS-3UTR CAA 90 bp CATTCTGGAGAAAGCAAAGTTAGTAAAGACTGGTTGCCAGAGGTTCAGTGGGAGAACATTTGCCTCTGGTaGCTTCAGCACATCAGCTTT +
Preference number: 5 (lower is better)
Translates to: HSGESKVSKDWLPEVQWENICLW*LQHISF
Trigger: AAAGCTGATGTGCTGAAGCAACCAGAGGCAAATGTT...CTCCCACTGAACCTCTGGCAACCAGTCTTTACTAACTTTGCTTTCTCCAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR CAA 90 bp CTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGTGACTTCGAAAACATTTGCCTCTGGTaGCTTCAGCACATCAGCTTT +
Preference number: 5 (lower is better)
Translates to: LQHISFLGRVMLNQCDFENICLW*LQHISF
Trigger: AAAGCTGATGTGCTGAAGCAACCAGAGGCAAATGTT...TTCGAAGTCACATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR CAA 90 bp GGGAGAGTCATGTTGAACCAATGTGACTTCGAATTATACTGGTATCACCCCCTATGGGTGATGAATGAATaGGTGACACTAGTGACCCAC +
Preference number: 5 (lower is better)
Translates to: GRVMLNQCDFELYWYHPLWVMNE*VTLVTH
Trigger: GTGGGTCACTAGTGTCACCAATTCATTCATCACCCA...TAGGGGGTGATACCAGTATAATTCGAAGTCACATTGGTTCAACATGACTCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR CAA 90 bp TATAGTTTTCAACGCACCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCATGGGTGATGAATGAATaGGTGACACTAGTGACCCAC +
Preference number: 5 (lower is better)
Translates to: YSFQRTFPGFRSQQPSNAWVMNE*VTLVTH
Trigger: GTGGGTCACTAGTGTCACCAATTCATTCATCACCCA...TGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGGTGCGTTGAAAACTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000472094.5
CDS-3UTR CAA 90 bp TCAAACAGGTTACTTTTAGTTTGGATGCTGGAGCCTGGGAGAAAAACCTCTTCAGTTAGTAAAGACTGGTaGCCAGAGGTTCAGTGGGAG +
Preference number: 5 (lower is better)
Translates to: SNRLLLVWMLEPGRKTSSVSKDW*PEVQWE
Trigger: CTCCCACTGAACCTCTGGCAACCAGTCTTTACTAAC...TGAAGAGGTTTTTCTCCCAGGCTCCAGCATCCAAACTAAAAGTAACCTGTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000472094.5
CDS-3UTR CAA 90 bp TTGGATGCTGGAGCCTGGGAGAAAAACCTCTTCACAACGAGCTCCTGTATAGTTGTCAAGAGAGTAGGGTaGAAAAACAGTACCCTCAAT +
Preference number: 5 (lower is better)
Translates to: LDAGAWEKNLFTTSSCIVVKRVG*KNSTLN
Trigger: ATTGAGGGTACTGTTTTTCAACCCTACTCTCTTGAC...AACTATACAGGAGCTCGTTGTGAAGAGGTTTTTCTCCCAGGCTCCAGCATCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000562114.5
CDS-3UTR CAA 90 bp CCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCCACATATGTGTGTGGTTaGAATTCTCCTTTAAGCCAG +
Preference number: 5 (lower is better)
Translates to: PSQASGLNNLLMQGKSHATYVCG*NSPLSQ
Trigger: CTGGCTTAAAGGAGAATTCAAACCACACACATATGT...GGCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000565661.5
CDS CCA 90 bp GAGAGAATGCCAACTACAGCCACGTTAGAAACGAACAGTTATGTCTaGCAAGGAAGTGATATACCAAGCTTAAACCCACAGTTCCACTTC +
Preference number: 5 (lower is better)
Translates to: ERMPTTATLETNSYV*QGSDIPSLNPQFHF
Trigger: GAAGTGGAACTGTGGGTTTAAGCTTGGTATATCACTTCCTTGCCAGACATAACTGTTCGTTTCTAACGTGGCTGTAGTTGGCATTCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563582.1
CDS-3UTR CAA 90 bp TTTAGTTTGGATGCTGGAGCCTGGGAGAAAAACCTCTTCACAACGAGCTCCTGTGTGTTTCAAAAGTTTTaGAATACCGCAGACAACAGC +
Preference number: 5 (lower is better)
Translates to: FSLDAGAWEKNLFTTSSCVFQKF*NTADNS
Trigger: GCTGTTGTCTGCGGTATTCAAAAACTTTTGAAACAC...ACAGGAGCTCGTTGTGAAGAGGTTTTTCTCCCAGGCTCCAGCATCCAAACTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000461391.5
ENST00000562114.5
ENST00000567936.5
CDS-3UTR CAA 90 bp TTGGATGCTGGAGCCTGGGAGAAAAACCTCTTCACAACGAGCTCCTGTATAGTTGTGTTTCAAAAGTTTTaGAATACCGCAGACAACAGC +
Preference number: 5 (lower is better)
Translates to: LDAGAWEKNLFTTSSCIVVFQKF*NTADNS
Trigger: GCTGTTGTCTGCGGTATTCAAAAACTTTTGAAACAC...AACTATACAGGAGCTCGTTGTGAAGAGGTTTTTCTCCCAGGCTCCAGCATCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000461391.5
ENST00000562114.5
ENST00000567936.5
CDS-3UTR CAA 90 bp CAACAACCTTCTAATGCAGGGAAAATCTCATGCCCAACTTGGAATAAGACAAAGGACGTTTCTTCAGTGTaGTTCATGACTGTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: QQPSNAGKISCPTWNKTKDVSSV*FMTVVG
Trigger: GCCCACCACAGTCATGAACAACACTGAAGAAACGTC...CTTTGTCTTATTCCAAGTTGGGCATGAGATTTTCCCTGCATTAGAAGGTTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR CAA 90 bp CAACGCACCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCATGATTTGGTTCACTTaGACGTTTCTTCAGTGTTGT +
Preference number: 5 (lower is better)
Translates to: QRTFPGFRSQQPSNAGKIMIWFT*TFLQCC
Trigger: ACAACACTGAAGAAACGTCAAAGTGAACCAAATCAT...GATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGGTGCGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR CAA 90 bp GCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCCCAACTTGGAATTGAAAGCGGAGGCTaGAGGGTATATTTGTATACC +
Preference number: 5 (lower is better)
Translates to: ASGLNNLLMQGKSHAQLGIESGG*RVYLYT
Trigger: GGTATACAAATATACCCTCAAGCCTCCGCTTTCAAT...TCCAAGTTGGGCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461391.5
CDS-3UTR CAA 90 bp ATTTGCCTCTGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAACCAAATCAAAACCACATaGAGATACCACTTCATACCC +
Preference number: 5 (lower is better)
Translates to: ICLWLLQHISFLGRVMLNQIKTT*RYHFIP
Trigger: GGGTATGAAGTGGTATCTCAATGTGGTTTTGATTTG...GTTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCAGAGGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
CDS-3UTR CAA 90 bp ACCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCTCTCTTGATTATAATTaGGGTTTCCCATCTAGGTCC +
Preference number: 5 (lower is better)
Translates to: TFPGFRSQQPSNAGKISCSLDYN*GFPSRS
Trigger: GGACCTAGATGGGAAACCCAAATTATAATCAAGAGA...GCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565661.5
ENST00000567126.5
CDS TCA 90 bp AACTACAGCCACGTTAGAAACGAACAGTTATGTCTGGCAAGGAAGTaGTATACCAAGCTTAAACCCACAGTTCCACTTCTGCTTTACAGC +
Preference number: 5 (lower is better)
Translates to: NYSHVRNEQLCLARK*YTKLKPTVPLLLYS
Trigger: GCTGTAAAGCAGAAGTGGAACTGTGGGTTTAAGCTTGGTATATCACTTCCTTGCCAGACATAACTGTTCGTTTCTAACGTGGCTGTAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563582.1
CDS-3UTR CAA 90 bp TCCTGTATAGTTTTCAACGCACCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAGTGTTTCAAAAGTTTTaGAATACCGCAGACAACAGC +
Preference number: 5 (lower is better)
Translates to: SCIVFNAPSQASGLNNLLVFQKF*NTADNS
Trigger: GCTGTTGTCTGCGGTATTCAAAAACTTTTGAAACAC...TAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGGTGCGTTGAAAACTATACAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461391.5
ENST00000562114.5
ENST00000567936.5
CDS-3UTR CAA 90 bp GCACATTACAGAAGCACACACACCTTGCAGCAGAATGGATTATGGTTCATGATACTCGTCTCTACCAGGTaGATATCATACTGGACTGAA +
Preference number: 5 (lower is better)
Translates to: AHYRSTHTLQQNGLWFMILVSTR*ISYWTE
Trigger: TTCAGTCCAGTATGATATCAACCTGGTAGAGACGAG...TATCATGAACCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCTGTAATGTGC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
CDS-3UTR CAA 90 bp CACATCAGCTTTCTGGGGAGAGTCATGTTGAACCAATGTGACTTCGAATTATACCTCGTCTCTACCAGGTaGATATCATACTGGACTGAA +
Preference number: 5 (lower is better)
Translates to: HISFLGRVMLNQCDFELYLVSTR*ISYWTE
Trigger: TTCAGTCCAGTATGATATCAACCTGGTAGAGACGAG...GTATAATTCGAAGTCACATTGGTTCAACATGACTCTCCCCAGAAAGCTGATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR CAA 90 bp AAACTGGGTATGAGTTGGCTTAATGAAAATCCTAGTGGTGTTTCATTTTCTGCCGACGTTTCTTCAGTGTaGTTCATGACTGTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: KLGMSWLNENPSGVSFSADVSSV*FMTVVG
Trigger: GCCCACCACAGTCATGAACAACACTGAAGAAACGTC...GGCAGAAAATGAAACACCACTAGGATTTTCATTAAGCCAACTCATACCCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566417.5
CDS-3UTR CAA 90 bp CATTTGCCTCTGGTTGCTTCAGCACATCAGCTTTCTGGGGAGAGTCATGTTGAAATGATTTGGTTCACTTaGACGTTTCTTCAGTGTTGT +
Preference number: 5 (lower is better)
Translates to: HLPLVASAHQLSGESHVEMIWFT*TFLQCC
Trigger: ACAACACTGAAGAAACGTCAAAGTGAACCAAATCAT...TTCAACATGACTCTCCCCAGAAAGCTGATGTGCTGAAGCAACCAGAGGCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
ENST00000568073.5
CDS-3UTR CAA 90 bp GTTGCCGATGGACTGATGCACATTACAGAAGCACACACACCTAGTGGTGTTTCAATGATTTGGTTCACTTaGACGTTTCTTCAGTGTTGT +
Preference number: 5 (lower is better)
Translates to: VADGLMHITEAHTPSGVSMIWFT*TFLQCC
Trigger: ACAACACTGAAGAAACGTCAAAGTGAACCAAATCAT...TGAAACACCACTAGGTGTGTGTGCTTCTGTAATGTGCATCAGTCCATCGGCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568073.5
CDS-3UTR CAA 90 bp GTGTGGTTTGAATTCTCCTTTAAGCCAGTTGTGACATCTATTGGTTCCCTCATTAGAAGCACACACACCTaGCAGCAGAATGGATTATGG +
Preference number: 5 (lower is better)
Translates to: VWFEFSFKPVVTSIGSLIRSTHT*QQNGLW
Trigger: CCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCT...AATGAGGGAACCAATAGATGTCACAACTGGCTTAAAGGAGAATTCAAACCACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000565661.5
CDS-3UTR CAA 90 bp GCACATTACAGAAGCACACACACCTTGCAGCAGAATGGATTATGGTTCATGATAAACATTTGCCTCTGGTaGCTTCAGCACATCAGCTTT +
Preference number: 5 (lower is better)
Translates to: AHYRSTHTLQQNGLWFMINICLW*LQHISF
Trigger: AAAGCTGATGTGCTGAAGCAACCAGAGGCAAATGTT...TATCATGAACCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCTGTAATGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
CDS-3UTR CAA 90 bp AACCTCTTCACAACGAGCTCCTGTATAGTTTTCAACGCACCTTCCCAGGCTTCAAAGGATGTGGAGAAATaGGAACTCTTATTACTGATG +
Preference number: 5 (lower is better)
Translates to: NLFTTSSCIVFNAPSQASKDVEK*ELLLLM
Trigger: CATCAGTAATAAGAGTTCCAATTTCTCCACATCCTT...TGAAGCCTGGGAAGGTGCGTTGAAAACTATACAGGAGCTCGTTGTGAAGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461391.5
CDS-3UTR CAA 90 bp ACACACACCTTGCAGCAGAATGGATTATGGTTCATGATACGAGTTACACAAGCGAAAATGGCAAAGGATTaGGATAGATCTCCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: THTLQQNGLWFMIRVTQAKMAKD*DRSPER
Trigger: CCTCTCTGGAGATCTATCCAAATCCTTTGCCATTTT...CGCTTGTGTAACTCGTATCATGAACCATAATCCATTCTGCTGCAAGGTGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
CDS-3UTR CAA 90 bp TGTATAGTTTTCAACGCACCTTCCCAGGCTTCAGGTCTCAACAACCTTCTAATGCCACCTGATCTGTCCTaGGATGAAAATTTTTCCTCT +
Preference number: 5 (lower is better)
Translates to: CIVFNAPSQASGLNNLLMPPDLS*DENFSS
Trigger: AGAGGAAAAATTTTCATCCAAGGACAGATCAGGTGG...CATTAGAAGGTTGTTGAGACCTGAAGCCTGGGAAGGTGCGTTGAAAACTATACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000565661.5
ENST00000567126.5
CDS-3UTR CAA 90 bp TCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCCCAACTTGGAATAAGACAACTAGCTGTGTGATCTaGAGCAGGCTACTTAATCCC +
Preference number: 5 (lower is better)
Translates to: SQQPSNAGKISCPTWNKTTSCVI*SRLLNP
Trigger: GGGATTAAGTAGCCTGCTCAAGATCACACAGCTAGT...TGTCTTATTCCAAGTTGGGCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567126.5
CDS CCA 90 bp AGGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCCCAACTTaGAATAAGACAAAGAGAAGCCAGCATCAGTTCACTTCCTACAAA +
Preference number: 5 (lower is better)
Translates to: RSQQPSNAGKISCPT*NKTKRSQHQFTSYK
Trigger: TTTGTAGGAAGTGAACTGATGCTGGCTTCTCTTTGTCTTATTCCAAGTTGGGCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000472094.5
ENST00000498750.5
ENST00000562114.5
ENST00000567126.5
ENST00000567936.5
ENST00000568073.5
CDS-3UTR CAA 90 bp ATTACCTATGGAGTGGGAGGAAATAATATGCAGTTCACGTACCTAATAAGGATTGACGTTTCTTCAGTGTaGTTCATGACTGTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: ITYGVGGNNMQFTYLIRIDVSSV*FMTVVG
Trigger: GCCCACCACAGTCATGAACAACACTGAAGAAACGTC...AATCCTTATTAGGTACGTGAACTGCATATTATTTCCTCCCACTCCATAGGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
CDS-3UTR CAA 90 bp CTTCCTTTGAGAGACAGATCCTTGAAATCAGTCACTTCTAGTAGAAAGCATTTTGACGTTTCTTCAGTGTaGTTCATGACTGTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: LPLRDRSLKSVTSSRKHFDVSSV*FMTVVG
Trigger: GCCCACCACAGTCATGAACAACACTGAAGAAACGTC...AAAATGCTTTCTACTAGAAGTGACTGATTTCAAGGATCTGTCTCTCAAAGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000568073.5
CDS-3UTR CAA 90 bp ACATTACAGAAGCACACACACCTTGCAGCAGAATGGATTATGGTTCATGATACGGGGAATGGGAATTTATaGTTTAAGGGGCACAGAGAT +
Preference number: 5 (lower is better)
Translates to: TLQKHTHLAAEWIMVHDTGNGNL*FKGHRD
Trigger: ATCTCTGTGCCCCTTAAACAATAAATTCCCATTCCC...CGTATCATGAACCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCTGTAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
CDS-3UTR CAA 90 bp GGGAGAGTCATGTTGAACCAATGTGACTTCGAATTATACTGGTATCACCCCCTAACATATGTGTGTGGTTaGAATTCTCCTTTAAGCCAG +
Preference number: 5 (lower is better)
Translates to: GRVMLNQCDFELYWYHPLTYVCG*NSPLSQ
Trigger: CTGGCTTAAAGGAGAATTCAAACCACACACATATGT...TAGGGGGTGATACCAGTATAATTCGAAGTCACATTGGTTCAACATGACTCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000565661.5
CDS-3UTR CAA 90 bp GGTCTCAACAACCTTCTAATGCAGGGAAAATCTCATGCCCAACTTGGAATAAGATCACACTGCCCAAGTTaGAATCTTGGTTCCTTACTA +
Preference number: 5 (lower is better)
Translates to: GLNNLLMQGKSHAQLGIRSHCPS*NLGSLL
Trigger: TAGTAAGGAACCAAGATTCAAACTTGGGCAGTGTGA...TCTTATTCCAAGTTGGGCATGAGATTTTCCCTGCATTAGAAGGTTGTTGAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567126.5
CDS-3UTR CAA 90 bp GCACATTACAGAAGCACACACACCTTGCAGCAGAATGGATTATGGTTCATGATAGTGTTTCAAAAGTTTTaGAATACCGCAGACAACAGC +
Preference number: 5 (lower is better)
Translates to: AHYRSTHTLQQNGLWFMIVFQKF*NTADNS
Trigger: GCTGTTGTCTGCGGTATTCAAAAACTTTTGAAACAC...TATCATGAACCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCTGTAATGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000562114.5
CDS-3UTR CAA 90 bp AAACTGGGTATGAGTTGGCTTAATGAAAATCCTAGTGGTGTTTCATTTTCTGCCCTCGTCTCTACCAGGTaGATATCATACTGGACTGAA +
Preference number: 5 (lower is better)
Translates to: KLGMSWLNENPSGVSFSALVSTR*ISYWTE
Trigger: TTCAGTCCAGTATGATATCAACCTGGTAGAGACGAG...GGCAGAAAATGAAACACCACTAGGATTTTCATTAAGCCAACTCATACCCAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566417.5
CDS-3UTR CAA 90 bp CTGATGCACATTACAGAAGCACACACACCTTGCAGCAGAATGGATTATGGTTCAATGATTTGGTTCACTTaGACGTTTCTTCAGTGTTGT +
Preference number: 5 (lower is better)
Translates to: LMHITEAHTPCSRMDYGSMIWFT*TFLQCC
Trigger: ACAACACTGAAGAAACGTCAAAGTGAACCAAATCAT...TGAACCATAATCCATTCTGCTGCAAGGTGTGTGTGCTTCTGTAATGTGCATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
CDS-3UTR CAA 90 bp ACACACACCTTGCAGCAGAATGGATTATGGTTCATGATACGAGTTACACAAGCGATGATTTGGTTCACTTaGACGTTTCTTCAGTGTTGT +
Preference number: 5 (lower is better)
Translates to: THTLQQNGLWFMIRVTQAMIWFT*TFLQCC
Trigger: ACAACACTGAAGAAACGTCAAAGTGAACCAAATCAT...CGCTTGTGTAACTCGTATCATGAACCATAATCCATTCTGCTGCAAGGTGTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000562114.5
ENST00000565661.5
CDS-3UTR CAA 90 bp TTGAACCAATGTGACTTCGAATTATACTGGTATCACCCCCTACTTAGCAGTTGCTTGAGAGACAGATCCTaGAAATCAGTCACTTCTAGT +
Preference number: 5 (lower is better)
Translates to: LNQCDFELYWYHPLLSSCLRDRS*KSVTSS
Trigger: ACTAGAAGTGACTGATTTCAAGGATCTGTCTCTCAA...GCAACTGCTAAGTAGGGGGTGATACCAGTATAATTCGAAGTCACATTGGTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
ENST00000568073.5
CDS-3UTR CAA 90 bp GAACTTTGTGACCTGTGTAGTACAATAACAATCCTAAATTTCCAGTTACTTGCAGTTAGTAAAGACTGGTaGCCAGAGGTTCAGTGGGAG +
Preference number: 5 (lower is better)
Translates to: ELCDLCSTITILNFQLLAVSKDW*PEVQWE
Trigger: CTCCCACTGAACCTCTGGCAACCAGTCTTTACTAAC...TGCAAGTAACTGGAAATTTAGGATTGTTATTGTACTACACAGGTCACAAAGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR CAA 90 bp GGGAGAGTCATGTTGAACCAATGTGACTTCGAATTATACTGGTATCACCCCCTAAAGGATGTGGAGAAATaGGAACTCTTATTACTGATG +
Preference number: 5 (lower is better)
Translates to: GRVMLNQCDFELYWYHPLKDVEK*ELLLLM
Trigger: CATCAGTAATAAGAGTTCCAATTTCTCCACATCCTT...TAGGGGGTGATACCAGTATAATTCGAAGTCACATTGGTTCAACATGACTCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
CDS-3UTR CAA 90 bp CAACCTTCTAATGCAGGGAAAATCTCATGCCCAACTTGGAATAAGACAAAGAGACCACCTGATCTGTCCTaGGATGAAAATTTTTCCTCT +
Preference number: 5 (lower is better)
Translates to: QPSNAGKISCPTWNKTKRPPDLS*DENFSS
Trigger: AGAGGAAAAATTTTCATCCAAGGACAGATCAGGTGG...TCTCTTTGTCTTATTCCAAGTTGGGCATGAGATTTTCCCTGCATTAGAAGGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000565661.5
ENST00000567126.5
CDS-3UTR CAA 90 bp CCAATGATAAGTGTTACTAGGACCGCCAATGCCACAAAAGCTTCAAACAGGTTATCTCTTGATTATAATTaGGGTTTCCCATCTAGGTCC +
Preference number: 5 (lower is better)
Translates to: PMISVTRTANATKASNRLSLDYN*GFPSRS
Trigger: GGACCTAGATGGGAAACCCAAATTATAATCAAGAGA...TAACCTGTTTGAAGCTTTTGTGGCATTGGCGGTCCTAGTAACACTTATCATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565661.5
CDS-3UTR CAA 90 bp CATGCACTAAAAATTACAAGGGAAATAGGTTTGGAACTTTGTGACCTGTGTAGTAACATTTGCCTCTGGTaGCTTCAGCACATCAGCTTT +
Preference number: 5 (lower is better)
Translates to: HALKITREIGLELCDLCSNICLW*LQHISF
Trigger: AAAGCTGATGTGCTGAAGCAACCAGAGGCAAATGTT...ACTACACAGGTCACAAAGTTCCAAACCTATTTCCCTTGTAATTTTTAGTGCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR CAA 90 bp ACAAAAGCTTCAAACAGGTTACTTTTAGTTTGGATGCTGGAGCCTGGGAGAAAACAAATCAAAACCACATaGAGATACCACTTCATACCC +
Preference number: 5 (lower is better)
Translates to: TKASNRLLLVWMLEPGRKQIKTT*RYHFIP
Trigger: GGGTATGAAGTGGTATCTCAATGTGGTTTTGATTTG...TTTTCTCCCAGGCTCCAGCATCCAAACTAAAAGTAACCTGTTTGAAGCTTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000461391.5
CDS-3UTR CAA 90 bp ACAATCCTAAATTTCCAGTTACTTGCACCTAGAATTAGTCAATCTTTTGCAGTCCTCGTCTCTACCAGGTaGATATCATACTGGACTGAA +
Preference number: 5 (lower is better)
Translates to: TILNFQLLAPRISQSFAVLVSTR*ISYWTE
Trigger: TTCAGTCCAGTATGATATCAACCTGGTAGAGACGAG...GACTGCAAAAGATTGACTAATTCTAGGTGCAAGTAACTGGAAATTTAGGATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394907.8
ENST00000461391.5
ENST00000472094.5
CDS-3UTR CAA 90 bp AAACTGGGTATGAGTTGGCTTAATGAAAATCCTAGTGGTGTTTCATTTTCTGCCGTCAAGAGAGTAGGGTaGAAAAACAGTACCTCAAAA +
Preference number: 5 (lower is better)
Translates to: KLGMSWLNENPSGVSFSAVKRVG*KNSTSK
Trigger: TTTTGAGGTACTGTTTTTCAACCCTACTCTCTTGAC...GGCAGAAAATGAAACACCACTAGGATTTTCATTAAGCCAACTCATACCCAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566417.5
CDS TCA 90 bp TCCTGTACATATGTGTGTGGTTTGAATTCTCCTTTAAGCCAGTTGTaGCATCTATTGGTTCCCTCATTAATCAGTTCCTCATTAACTACA +
Preference number: 5 (lower is better)
Translates to: SCTYVCGLNSPLSQL*HLLVPSLISSSLTT
Trigger: TGTAGTTAATGAGGAACTGATTAATGAGGGAACCAATAGATGTCACAACTGGCTTAAAGGAGAATTCAAACCACACACATATGTACAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461391.5
ENST00000565661.5
CDS-3UTR CAA 90 bp AAACTGGGTATGAGTTGGCTTAATGAAAATCCTAGTGGTGTTTCATTTTCTGCCATGATTTGGTTCACTTaGACGTTTCTTCAGTGTTGT +
Preference number: 5 (lower is better)
Translates to: KLGMSWLNENPSGVSFSAMIWFT*TFLQCC
Trigger: ACAACACTGAAGAAACGTCAAAGTGAACCAAATCAT...GGCAGAAAATGAAACACCACTAGGATTTTCATTAAGCCAACTCATACCCAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566417.5
CDS-3UTR CAA 90 bp CTTCCTTTGAGAGACAGATCCTTGAAATCAGTCACTTCTAGTAGAAAGCATTTTAAAAACACACAAGTGTaGGCAAGGATGTGGAGAAAT +
Preference number: 5 (lower is better)
Translates to: LPLRDRSLKSVTSSRKHFKNTQV*ARMWRN
Trigger: ATTTCTCCACATCCTTGCCAACACTTGTGTGTTTTT...AAAATGCTTTCTACTAGAAGTGACTGATTTCAAGGATCTGTCTCTCAAAGGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
CDS-3UTR CAA 90 bp ACAATCCTAAATTTCCAGTTACTTGCACCTAGAATTAGTCAATCTTTTGCAGTCAAAAACACACAAGTGTaGGCAAGGATGTGGAGAAAT +
Preference number: 5 (lower is better)
Translates to: TILNFQLLAPRISQSFAVKNTQV*ARMWRN
Trigger: ATTTCTCCACATCCTTGCCAACACTTGTGTGTTTTT...GACTGCAAAAGATTGACTAATTCTAGGTGCAAGTAACTGGAAATTTAGGATTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394907.8
ENST00000461391.5
CDS CCA 72 bp GAACAGTTATGTCCACGCCACGAAGCCCGCTCTGCGTaGCAGCCCCGGAGACAGCCGAGCCCCCGCCTCCGC +
Preference number: 6 (lower is better)
Translates to: EQLCPRHEARSA*QPRRQPSPRLR
Trigger: GCGGAGGCGGGGGCTCGGCTGTCTCCGGGGCTGCCACGCAGAGCGGGCTTCGTGGCGTGGACATAACTGTTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563910.5
CDS CCA 72 bp CAGTTTCTTCATCCACGCCACGAAGCCCGCTCTGCGTaGCAGCCCCGGAGACAGCCGAGCCCCCGCCTCCGC +
Preference number: 6 (lower is better)
Translates to: QFLHPRHEARSA*QPRRQPSPRLR
Trigger: GCGGAGGCGGGGGCTCGGCTGTCTCCGGGGCTGCCACGCAGAGCGGGCTTCGTGGCGTGGATGAAGAAACTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567126.5
CDS GCA 72 bp GCCTCAGTTTCTTCATCCACGCCACGAAGCCCGCTCTaGGTGGCAGCCCCGGAGACAGCCGAGCCCCCGCCT +
Preference number: 6 (lower is better)
Translates to: ASVSSSTPRSPL*VAAPETAEPPP
Trigger: AGGCGGGGGCTCGGCTGTCTCCGGGGCTGCCACGCAGAGCGGGCTTCGTGGCGTGGATGAAGAAACTGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567126.5
CDS GCA 72 bp AAACGAACAGTTATGTCCACGCCACGAAGCCCGCTCTaGGTGGCAGCCCCGGAGACAGCCGAGCCCCCGCCT +
Preference number: 6 (lower is better)
Translates to: KRTVMSTPRSPL*VAAPETAEPPP
Trigger: AGGCGGGGGCTCGGCTGTCTCCGGGGCTGCCACGCAGAGCGGGCTTCGTGGCGTGGACATAACTGTTCGTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563910.5
CDS TCA 72 bp CACGTTAGAAACGAACAGTTATGTCTGGCAAGGAAGTaGTATACCAAGCTTAAACCCACAGTTCCACTTCTG +
Preference number: 6 (lower is better)
Translates to: HVRNEQLCLARK*YTKLKPTVPLL
Trigger: CAGAAGTGGAACTGTGGGTTTAAGCTTGGTATATCACTTCCTTGCCAGACATAACTGTTCGTTTCTAACGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563582.1
CDS GCA 72 bp TTGTCATTTTATACCCAGTCTGGCCCAGGTTTGCACTaGCATAAATTCAGTTTTAATGGGAACAGAAGACTC +
Preference number: 6 (lower is better)
Translates to: LSFYTQSGPGLH*HKFSFNGNRRL
Trigger: GAGTCTTCTGTTCCCATTAAAACTGAATTTATGGCAGTGCAAACCTGGGCCAGACTGGGTATAAAATGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567467.5
ENST00000569343.5
CDS CAA 72 bp TGGGTTTCCCATCTAGGTCCACCACCTGATCTGTCCTaGGATGAAAATTTTTCCTCTAAATTGCAGAATAGA +
Preference number: 6 (lower is better)
Translates to: WVSHLGPPPDLS*DENFSSKLQNR
Trigger: TCTATTCTGCAATTTAGAGGAAAAATTTTCATCCAAGGACAGATCAGGTGGTGGACCTAGATGGGAAACCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000563910.5
ENST00000565661.5
ENST00000567126.5
CDS CAA 90 bp AAACCCACAGTTCCACTTCTGCTTTACAGCTCTTATACTTTCCTGTaGCTACTAAGCTCCTTTACTCACAAAATTCCTCTCATTAGTCAC +
Preference number: 6 (lower is better)
Translates to: KPTVPLLLYSSYTFL*LLSSFTHKIPLISH
Trigger: GTGACTAATGAGAGGAATTTTGTGAGTAAAGGAGCTTAGTAGCAACAGGAAAGTATAAGAGCTGTAAAGCAGAAGTGGAACTGTGGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563582.1