Pregenerated sensors for NRG1-IT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000253974Ensembl transcript IDs: ENST00000520444.5, ENST00000521463.5, ENST00000523743.1, ENST00000523785.1, ENST00000656776.1
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGCAAGGGTCTTCTAAAAGCTCGTCTGGCCAACAGCTTCCTACTATaGCTCCTTCCTTCACTAGCCTTGTTGTGGGCATTCACCAAAACC | + |
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Preference number: 5 (lower is better) Translates to: SKGLLKARLANSFLL*LLPSLALLWAFTKT Trigger: GGTTTTGGTGAATGCCCACAACAAGGCTAGTGAAGGAAGGAGGCATAGTAGGAAGCTGTTGGCCAGACGAGCTTTTAGAAGACCCTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520444.5 |
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| CDS GCA 90 bp | TTGTCAGTTACCAGGTCCTTAAGCAGATCTTCTCCCCCAGGTGTTTaGCTTCTGAAGGGGAGAAATGGCGGTCAAAGGACTTTCCTCAAA | + |
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Preference number: 5 (lower is better) Translates to: LSVTRSLSRSSPPGV*LLKGRNGGQRTFLK Trigger: TTTGAGGAAAGTCCTTTGACCGCCATTTCTCCCCTTCAGAAGGCAAACACCTGGGGGAGAAGATCTGCTTAAGGACCTGGTAACTGACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000523785.1 ENST00000656776.1 |
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| CDS CCA 90 bp | GCCAACAGCTTCCTACTATGCCTCCTTCCTTCACTAGCCTTGTTGTaGGCATTCACCAAAACCAAAACACTGAAACGTGACTTTCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: ANSFLLCLLPSLALL*AFTKTKTLKRDFPP Trigger: TGGAGGAAAGTCACGTTTCAGTGTTTTGGTTTTGGTGAATGCCCACAACAAGGCTAGTGAAGGAAGGAGGCATAGTAGGAAGCTGTTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520444.5 |
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| CDS CCA 90 bp | CCAGGTGCCCTTCTTCCTCAGTTAGCATCAGACAAGATGCAAATTTaGGATGGTTACACTGGTGAAAGGCTCCAATTTCTGCACCTCATT | + |
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Preference number: 5 (lower is better) Translates to: PGALLPQLASDKMQI*DGYTGERLQFLHLI Trigger: AATGAGGTGCAGAAATTGGAGCCTTTCACCAGTGTAACCATCCCAAATTTGCATCTTGTCTGATGCTAACTGAGGAAGAAGGGCACCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521463.5 |
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| CDS CCA 90 bp | AGCCAAGCAAACCTTGTCATCATTTCTCTTGAGCCTTTGAGGTCCTaGCTGGCCTGTGATCAAGGTTCTTCAACAACTGGTGTAAAGCTT | + |
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Preference number: 5 (lower is better) Translates to: SQANLVIISLEPLRS*LACDQGSSTTGVKL Trigger: AAGCTTTACACCAGTTGTTGAAGAACCTTGATCACAGGCCAGCCAGGACCTCAAAGGCTCAAGAGAAATGATGACAAGGTTTGCTTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521463.5 |
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| CDS GCA 90 bp | TTTCCTCCATTCCTGCCATCCTTCCTATTCTTCTTAAGTCCTTCTTaGCCTAGGGTGAAGTCATTCATCTCCATCTTCGATCAGATGGTG | + |
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Preference number: 5 (lower is better) Translates to: FPPFLPSFLFFLSPS*PRVKSFISIFDQMV Trigger: CACCATCTGATCGAAGATGGAGATGAATGACTTCACCCTAGGGCAAGAAGGACTTAAGAAGAATAGGAAGGATGGCAGGAATGGAGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521463.5 |
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| CDS GCA 90 bp | TGCAACAATTTTAACATGTTTTGTTCCTGCTGGTCAAACTCCAGGTaGCCTTCTTCCTCAGTTAGCATCAGACAAGATGCAAATTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: CNNFNMFCSCWSNSR*PSSSVSIRQDANLG Trigger: TCCCAAATTTGCATCTTGTCTGATGCTAACTGAGGAAGAAGGGCACCTGGAGTTTGACCAGCAGGAACAAAACATGTTAAAATTGTTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521463.5 |
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| CDS CCA 90 bp | GCATGTTCTTTGCTAGACCTGCACATTCAAACCAACTTCCTTAGATaGTCACCATATACTTTAGAATACATGAGATGCCACACTTGTGAA | + |
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Preference number: 5 (lower is better) Translates to: ACSLLDLHIQTNFLR*SPYTLEYMRCHTCE Trigger: TTCACAAGTGTGGCATCTCATGTATTCTAAAGTATATGGTGACCATCTAAGGAAGTTGGTTTGAATGTGCAGGTCTAGCAAAGAACATGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521463.5 |
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| CDS TCA 90 bp | GCTAAAAATTCAAGAATGGAAAGTAGCCCAAAGACTGAAGAGTTGTaGGCACTGAATCCATTTGATTTTATTACCGGTAGTAGTCAACTG | + |
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Preference number: 5 (lower is better) Translates to: AKNSRMESSPKTEEL*ALNPFDFITGSSQL Trigger: CAGTTGACTACTACCGGTAATAAAATCAAATGGATTCAGTGCTCACAACTCTTCAGTCTTTGGGCTACTTTCCATTCTTGAATTTTTAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000520444.5 ENST00000521463.5 ENST00000656776.1 |
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| CDS GCA 90 bp | ACCAACTTCCTTAGATGGTCACCATATACTTTAGAATACATGAGATaGCACACTTGTGAAGTCCTCATCATCTTCTGCAACAATTTTAAC | + |
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Preference number: 5 (lower is better) Translates to: TNFLRWSPYTLEYMR*HTCEVLIIFCNNFN Trigger: GTTAAAATTGTTGCAGAAGATGATGAGGACTTCACAAGTGTGGCATCTCATGTATTCTAAAGTATATGGTGACCATCTAAGGAAGTTGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521463.5 |
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| CDS GCA 72 bp | ACCAGGTCCTTAAGCAGATCTTCTCCCCCAGGTGTTTaGCTTCTGAAGGGGAGAAATGGCGGTCAAAGGACT | + |
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Preference number: 6 (lower is better) Translates to: TRSLSRSSPPGV*LLKGRNGGQRT Trigger: AGTCCTTTGACCGCCATTTCTCCCCTTCAGAAGGCAAACACCTGGGGGAGAAGATCTGCTTAAGGACCTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000523785.1 ENST00000656776.1 |
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| CDS CAA 72 bp | TACCAGGTCCTTAAGCAGATCTTCTCCCCCAGGTGTTaGCCTTCTGAAGGGGAGAAATGGCGGTCAAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: YQVLKQIFSPRC*PSEGEKWRSKD Trigger: GTCCTTTGACCGCCATTTCTCCCCTTCAGAAGGCAAACACCTGGGGGAGAAGATCTGCTTAAGGACCTGGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000523785.1 ENST00000656776.1 |
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| CDS CAA 90 bp | CAAGGAGAAGGGATGGCTAGGCGGTTCTCGCTCCCATTCCATTCTTaGTCAGTTACCAGGTCCTTAAGCAGATCTTCTCCCCCAGGTGTT | + |
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Preference number: 6 (lower is better) Translates to: QGEGMARRFSLPFHS*SVTRSLSRSSPPGV Trigger: AACACCTGGGGGAGAAGATCTGCTTAAGGACCTGGTAACTGACAAAGAATGGAATGGGAGCGAGAACCGCCTAGCCATCCCTTCTCCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000523785.1 ENST00000656776.1 |
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| CDS CCA 72 bp | TTCTCCCCCAGGTGTTTGCCTTCTGAAGGGGAGAAATaGCGGTCAAAGGACTTTCCTCAAAGAGACAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: FSPRCLPSEGEK*RSKDFPQRDSC Trigger: GCAACTGTCTCTTTGAGGAAAGTCCTTTGACCGCCATTTCTCCCCTTCAGAAGGCAAACACCTGGGGGAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000523785.1 ENST00000656776.1 |
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| CDS CAA 72 bp | CACCACATTGCAGCCTGGGAGCTCCTCAGAACTGTTTaGGTTCTAATGGCTGCCCGATTCACAAAATCCAGC | + |
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Preference number: 6 (lower is better) Translates to: HHIAAWELLRTV*VLMAARFTKSS Trigger: GCTGGATTTTGTGAATCGGGCAGCCATTAGAACCAAAACAGTTCTGAGGAGCTCCCAGGCTGCAATGTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000520444.5 ENST00000521463.5 ENST00000523743.1 ENST00000656776.1 |
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| CDS GCA 72 bp | CTTCTAAAAGCTCGTCTGGCCAACAGCTTCCTACTATaGCTCCTTCCTTCACTAGCCTTGTTGTGGGCATTC | + |
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Preference number: 6 (lower is better) Translates to: LLKARLANSFLL*LLPSLALLWAF Trigger: GAATGCCCACAACAAGGCTAGTGAAGGAAGGAGGCATAGTAGGAAGCTGTTGGCCAGACGAGCTTTTAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520444.5 |
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| CDS CAA 90 bp | TTTGTCAGTTACCAGGTCCTTAAGCAGATCTTCTCCCCCAGGTGTTaGCCTTCTGAAGGGGAGAAATGGCGGTCAAAGGACTTTCCTCAA | + |
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Preference number: 6 (lower is better) Translates to: FVSYQVLKQIFSPRC*PSEGEKWRSKDFPQ Trigger: TTGAGGAAAGTCCTTTGACCGCCATTTCTCCCCTTCAGAAGGCAAACACCTGGGGGAGAAGATCTGCTTAAGGACCTGGTAACTGACAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000523785.1 ENST00000656776.1 |
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| CDS CAA 90 bp | CTGGCCAACAGCTTCCTACTATGCCTCCTTCCTTCACTAGCCTTGTaGTGGGCATTCACCAAAACCAAAACACTGAAACGTGACTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: LANSFLLCLLPSLAL*WAFTKTKTLKRDFP Trigger: AGGAAAGTCACGTTTCAGTGTTTTGGTTTTGGTGAATGCCCACAACAAGGCTAGTGAAGGAAGGAGGCATAGTAGGAAGCTGTTGGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520444.5 |
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| CDS CAA 90 bp | CGTCTGGCCAACAGCTTCCTACTATGCCTCCTTCCTTCACTAGCCTaGTTGTGGGCATTCACCAAAACCAAAACACTGAAACGTGACTTT | + |
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Preference number: 6 (lower is better) Translates to: RLANSFLLCLLPSLA*LWAFTKTKTLKRDF Trigger: AAAGTCACGTTTCAGTGTTTTGGTTTTGGTGAATGCCCACAACAAGGCTAGTGAAGGAAGGAGGCATAGTAGGAAGCTGTTGGCCAGACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520444.5 |
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| CDS CCA 72 bp | AACCTTGTCATCATTTCTCTTGAGCCTTTGAGGTCCTaGCTGGCCTGTGATCAAGGTTCTTCAACAACTGGT | + |
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Preference number: 6 (lower is better) Translates to: NLVIISLEPLRS*LACDQGSSTTG Trigger: ACCAGTTGTTGAAGAACCTTGATCACAGGCCAGCCAGGACCTCAAAGGCTCAAGAGAAATGATGACAAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521463.5 |
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| CDS CCA 72 bp | TTCCTACTATGCCTCCTTCCTTCACTAGCCTTGTTGTaGGCATTCACCAAAACCAAAACACTGAAACGTGAC | + |
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Preference number: 6 (lower is better) Translates to: FLLCLLPSLALL*AFTKTKTLKRD Trigger: GTCACGTTTCAGTGTTTTGGTTTTGGTGAATGCCCACAACAAGGCTAGTGAAGGAAGGAGGCATAGTAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520444.5 |
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| CDS GCA 72 bp | TTTAACATGTTTTGTTCCTGCTGGTCAAACTCCAGGTaGCCTTCTTCCTCAGTTAGCATCAGACAAGATGCA | + |
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Preference number: 6 (lower is better) Translates to: FNMFCSCWSNSR*PSSSVSIRQDA Trigger: TGCATCTTGTCTGATGCTAACTGAGGAAGAAGGGCACCTGGAGTTTGACCAGCAGGAACAAAACATGTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521463.5 |
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| CDS GCA 72 bp | TTCCTGCCATCCTTCCTATTCTTCTTAAGTCCTTCTTaGCCTAGGGTGAAGTCATTCATCTCCATCTTCGAT | + |
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Preference number: 6 (lower is better) Translates to: FLPSFLFFLSPS*PRVKSFISIFD Trigger: ATCGAAGATGGAGATGAATGACTTCACCCTAGGGCAAGAAGGACTTAAGAAGAATAGGAAGGATGGCAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521463.5 |
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| CDS CAA 72 bp | AACAGCTTCCTACTATGCCTCCTTCCTTCACTAGCCTaGTTGTGGGCATTCACCAAAACCAAAACACTGAAA | + |
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Preference number: 6 (lower is better) Translates to: NSFLLCLLPSLA*LWAFTKTKTLK Trigger: TTTCAGTGTTTTGGTTTTGGTGAATGCCCACAACAAGGCTAGTGAAGGAAGGAGGCATAGTAGGAAGCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520444.5 |
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| CDS CCA 72 bp | CAAAGACAGCATCGGGGTGACTTTAGCATCAGTGTCTaGCCAAAATCTACTCTTTGTCTTCAAGTTTATTCT | + |
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Preference number: 6 (lower is better) Translates to: QRQHRGDFSISV*PKSTLCLQVYS Trigger: AGAATAAACTTGAAGACAAAGAGTAGATTTTGGCCAGACACTGATGCTAAAGTCACCCCGATGCTGTCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523743.1 |
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| CDS TCA 72 bp | TGGAAAGTAGCCCAAAGACTGAAGAGTTGTGAGCACTaGATCCATTTGATTTTATTACCGGTAGTAGTCAAC | + |
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Preference number: 6 (lower is better) Translates to: WKVAQRLKSCEH*IHLILLPVVVN Trigger: GTTGACTACTACCGGTAATAAAATCAAATGGATTCAGTGCTCACAACTCTTCAGTCTTTGGGCTACTTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000520444.5 ENST00000521463.5 ENST00000656776.1 |
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| CDS TCA 72 bp | ATCAGACAAGATGCAAATTTGGGATGGTTACACTGGTaGAAGGCTCCAATTTCTGCACCTCATTTCCATTTT | + |
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Preference number: 6 (lower is better) Translates to: IRQDANLGWLHW*KAPISAPHFHF Trigger: AAAATGGAAATGAGGTGCAGAAATTGGAGCCTTTCACCAGTGTAACCATCCCAAATTTGCATCTTGTCTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521463.5 |
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| CDS TCA 72 bp | TCAAGAATGGAAAGTAGCCCAAAGACTGAAGAGTTGTaGGCACTGAATCCATTTGATTTTATTACCGGTAGT | + |
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Preference number: 6 (lower is better) Translates to: SRMESSPKTEEL*ALNPFDFITGS Trigger: ACTACCGGTAATAAAATCAAATGGATTCAGTGCTCACAACTCTTCAGTCTTTGGGCTACTTTCCATTCTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000520444.5 ENST00000521463.5 ENST00000656776.1 |
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| CDS CAA 90 bp | TTGCAGCTGTTTTCTTATGGAGCTTCTTTTCTGTGTTGTATATCATaGTTCCCAACTTTACGGATACTCAGTGAAGCCTACATAATTCCA | + |
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Preference number: 6 (lower is better) Translates to: LQLFSYGASFLCCIS*FPTLRILSEAYIIP Trigger: TGGAATTATGTAGGCTTCACTGAGTATCCGTAAAGTTGGGAACAATGATATACAACACAGAAAAGAAGCTCCATAAGAAAACAGCTGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520444.5 |
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| CDS CAA 72 bp | TTTTCTTATGGAGCTTCTTTTCTGTGTTGTATATCATaGTTCCCAACTTTACGGATACTCAGTGAAGCCTAC | + |
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Preference number: 6 (lower is better) Translates to: FSYGASFLCCIS*FPTLRILSEAY Trigger: GTAGGCTTCACTGAGTATCCGTAAAGTTGGGAACAATGATATACAACACAGAAAAGAAGCTCCATAAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520444.5 |
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| CDS TCA 72 bp | TTGTATATCATTGTTCCCAACTTTACGGATACTCAGTaGAGCCTACATAATTCCATTCTCACCTTCAATGTT | + |
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Preference number: 6 (lower is better) Translates to: LYIIVPNFTDTQ*SLHNSILTFNV Trigger: AACATTGAAGGTGAGAATGGAATTATGTAGGCTTCACTGAGTATCCGTAAAGTTGGGAACAATGATATACAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520444.5 |
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| CDS TCA 72 bp | TCAAAGAGACAGTTGCACTTGATCTTGAATAAAGACTaGAATTTCATCTCCAATTTCTGCACCTCATTTCCA | + |
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Preference number: 6 (lower is better) Translates to: SKRQLHLILNKD*NFISNFCTSFP Trigger: TGGAAATGAGGTGCAGAAATTGGAGATGAAATTTCAGTCTTTATTCAAGATCAAGTGCAACTGTCTCTTTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656776.1 |
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