RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NRF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000106459

Ensembl transcript IDs: ENST00000223190.8, ENST00000311967.6, ENST00000353868.5, ENST00000393230.6, ENST00000393232.6, ENST00000454688.5, ENST00000477428.5

Found 739 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGTGGCAAGGTCAGCACCTGGGCCAGCCCGAGGAGCATCTCAGCTaGCAGACCACGCAGTCCCTGGACCTTGCAAGCACATCTCTGACC +
Preference number: 1 (lower is better)
Translates to: LWQGQHLGQPEEHLS*QTTQSLDLASTSLT
Trigger: GGTCAGAGATGTGCTTGCAAGGTCCAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTCGGGCTGGCCCAGGTGCTGACCTTGCCACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR GCA 90 bp AACACCTCTGAGGAGGCAAGCTGCTCCCGGCCTGGGCCACGAGGTTaGATCAAGGAACATGGGCCTCCAGGAGTCCCTTCTGAAGCAGGG +
Preference number: 1 (lower is better)
Translates to: NTSEEASCSRPGPRG*IKEHGPPGVPSEAG
Trigger: CCCTGCTTCAGAAGGGACTCCTGGAGGCCCATGTTCCTTGATGCAACCTCGTGGCCCAGGCCGGGAGCAGCTTGCCTCCTCAGAGGTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR CCA 90 bp CGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTaGGCCAGCCCGAGGAGCATCTCAGCTGGCAGACCACGCAGTCCC +
Preference number: 1 (lower is better)
Translates to: RELSRHSSACGKVST*ASPRSISAGRPRSP
Trigger: GGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTCGGGCTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR CCA 90 bp CTGGAGCCTCTTTCCTCAGGTGAGTCCAGCAGGGAGAGTTCTGTGTaGCCACTGGGAGGCAGCTTTGGTGAAGGGCATGGTCACCTCCGC +
Preference number: 1 (lower is better)
Translates to: LEPLSSGESSRESSV*PLGGSFGEGHGHLR
Trigger: GCGGAGGTGACCATGCCCTTCACCAAAGCTGCCTCCCAGTGGCCACACAGAACTCTCCCTGCTGGACTCACCTGAGGAAAGAGGCTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR TCA 90 bp TCAGCTGGCAGACCACGCAGTCCCTGGACCTTGCAAGCACATCTCTaGCCCACCCCATGCTGGAGCCTCTTTCCTCAGGTGAGTCCAGCA +
Preference number: 1 (lower is better)
Translates to: SAGRPRSPWTLQAHL*PTPCWSLFPQVSPA
Trigger: TGCTGGACTCACCTGAGGAAAGAGGCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAAGGTCCAGGGACTGCGTGGTCTGCCAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR TCA 90 bp GTCCAGCAGGGAGAGTTCTGTGTGGCCACTGGGAGGCAGCTTTGGTaGAGGGCATGGTCACCTCCGCCTGAGTTTGTCAGTAGCTCAACG +
Preference number: 1 (lower is better)
Translates to: VQQGEFCVATGRQLW*RAWSPPPEFVSSST
Trigger: CGTTGAGCTACTGACAAACTCAGGCGGAGGTGACCATGCCCTTCACCAAAGCTGCCTCCCAGTGGCCACACAGAACTCTCCCTGCTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR GCA 90 bp GTTACCAAGAACACCCAGATAGTCAACACCTCTGAGGAGGCAAGCTaGTCCCGGCCTGGGCCACGAGGTTGCATCAAGGAACATGGGCCT +
Preference number: 1 (lower is better)
Translates to: VTKNTQIVNTSEEAS*SRPGPRGCIKEHGP
Trigger: AGGCCCATGTTCCTTGATGCAACCTCGTGGCCCAGGCCGGGAGCAGCTTGCCTCCTCAGAGGTGTTGACTATCTGGGTGTTCTTGGTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR TCA 90 bp GACAGAGTTAACGGTTACCAAGAACACCCAGATAGTCAACACCTCTaGGGAGGCAAGCTGCTCCCGGCCTGGGCCACGAGGTTGCATCAA +
Preference number: 1 (lower is better)
Translates to: DRVNGYQEHPDSQHL*GGKLLPAWATRLHQ
Trigger: TTGATGCAACCTCGTGGCCCAGGCCGGGAGCAGCTTGCCTCCTCAGAGGTGTTGACTATCTGGGTGTTCTTGGTAACCGTTAACTCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR TCA 90 bp CAGCTGTTTTCTATGGCCAGGTGTCCCTTCTTCCCTTCCGCGTACTaGCCGGGCCCAACCAAGCTTAGCTTCCAAGATCACACAAGATCA +
Preference number: 1 (lower is better)
Translates to: QLFSMARCPFFPSAY*PGPTKLSFQDHTRS
Trigger: TGATCTTGTGTGATCTTGGAAGCTAAGCTTGGTTGGGCCCGGTCAGTACGCGGAAGGGAAGAAGGGACACCTGGCCATAGAAAACAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR CCA 90 bp GAGTTTGTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACTaGGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGG +
Preference number: 1 (lower is better)
Translates to: EFVSSSTHDPGMNKN*VTVSGHVPYHPLNW
Trigger: CCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGACAAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR TCA 90 bp TACCACCCACTAAACTGGGTGAATTATTGTTTCCACAGCGCACCTTaGTTTCATACAGATAATTCCATGCGGGTTTCATACATATATATA +
Preference number: 1 (lower is better)
Translates to: YHPLNWVNYCFHSAP*FHTDNSMRVSYIYI
Trigger: TATATATATGTATGAAACCCGCATGGAATTATCTGTATGAAATCAAGGTGCGCTGTGGAAACAATAATTCACCCAGTTTAGTGGGTGGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR TCA 90 bp CCCGAGGAGCATCTCAGCTGGCAGACCACGCAGTCCCTGGACCTTGCAAGCACAGGGAGGCAGCTTTGGTaGAGGGCATGGTCACCTCCG +
Preference number: 2 (lower is better)
Translates to: PEEHLSWQTTQSLDLASTGRQLW*RAWSPP
Trigger: CGGAGGTGACCATGCCCTTCACCAAAGCTGCCTCCC...TGTGCTTGCAAGGTCCAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR TCA 90 bp CGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCGGGAGGCAGCTTTGGTaGAGGGCATGGTCACCTCCG +
Preference number: 2 (lower is better)
Translates to: RELSRHSSACGKVSTWASGRQLW*RAWSPP
Trigger: CGGAGGTGACCATGCCCTTCACCAAAGCTGCCTCCC...GCTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR TCA 90 bp AACACCTCTGAGGAGGCAAGCTGCTCCCGGCCTGGGCCACGAGGTTGCATCAAGTTGCAAGCACATCTCTaGCCCACCCCATGCTGGAGC +
Preference number: 2 (lower is better)
Translates to: NTSEEASCSRPGPRGCIKLQAHL*PTPCWS
Trigger: GCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAA...CTTGATGCAACCTCGTGGCCCAGGCCGGGAGCAGCTTGCCTCCTCAGAGGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CCA 90 bp GCCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCCTGGGTGACTGTGTCTaGCCACGTACCCTACCACCC +
Preference number: 2 (lower is better)
Translates to: ARELSRHSSACGKVSTWALGDCV*PRTLPP
Trigger: GGGTGGTAGGGTACGTGGCCAGACACAGTCACCCAG...GGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR GCA 90 bp AACACCTCTGAGGAGGCAAGCTGCTCCCGGCCTGGGCCACGAGGTTGCATCAAGGCAGTCCCTGGACCTTaGAAGCACATCTCTGACCCA +
Preference number: 2 (lower is better)
Translates to: NTSEEASCSRPGPRGCIKAVPGP*KHISDP
Trigger: TGGGTCAGAGATGTGCTTGCAAGGTCCAGGGACTGC...CTTGATGCAACCTCGTGGCCCAGGCCGGGAGCAGCTTGCCTCCTCAGAGGTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CCA 90 bp CGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCCTGGGTGACTGTGTCTaGCCACGTACCCTACCACCC +
Preference number: 2 (lower is better)
Translates to: RELSRHSSACGKVSTWASLGDCV*PRTLPP
Trigger: GGGTGGTAGGGTACGTGGCCAGACACAGTCACCCAG...GCTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CCA 90 bp CCCGAGGAGCATCTCAGCTGGCAGACCACGCAGTCCCTGGACCTTGCAAGCACAGTTCTGTGTGGCCACTaGGAGGCAGCTTTGGTGAAG +
Preference number: 2 (lower is better)
Translates to: PEEHLSWQTTQSLDLASTVLCGH*EAALVK
Trigger: CTTCACCAAAGCTGCCTCCCAGTGGCCACACAGAAC...TGTGCTTGCAAGGTCCAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CCA 90 bp CCCGAGGAGCATCTCAGCTGGCAGACCACGCAGTCCCTGGACCTTGCAAGCACAAGGGAGAGTTCTGTGTaGCCACTGGGAGGCAGCTTT +
Preference number: 2 (lower is better)
Translates to: PEEHLSWQTTQSLDLASTRESSV*PLGGSF
Trigger: AAAGCTGCCTCCCAGTGGCCACACAGAACTCTCCCT...TGTGCTTGCAAGGTCCAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR TCA 90 bp CCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGTTGCAAGCACATCTCTaGCCCACCCCATGCTGGAGC +
Preference number: 2 (lower is better)
Translates to: PGAFKTFICLWQGQHLGQLQAHL*PTPCWS
Trigger: GCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAA...CTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CCA 90 bp GCCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGACCACGCAGTCCCTaGACCTTGCAAGCACATCTC +
Preference number: 2 (lower is better)
Translates to: ARELSRHSSACGKVSTWARPRSP*TLQAHL
Trigger: GAGATGTGCTTGCAAGGTCCAGGGACTGCGTGGTCT...GGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR GCA 90 bp CCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGGCAGTCCCTGGACCTTaGAAGCACATCTCTGACCCA +
Preference number: 2 (lower is better)
Translates to: PGAFKTFICLWQGQHLGQAVPGP*KHISDP
Trigger: TGGGTCAGAGATGTGCTTGCAAGGTCCAGGGACTGC...CTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CCA 90 bp CCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGTTCTGTGTGGCCACTaGGAGGCAGCTTTGGTGAAG +
Preference number: 2 (lower is better)
Translates to: PGSFQDIHLPVARSAPGPVLCGH*EAALVK
Trigger: CTTCACCAAAGCTGCCTCCCAGTGGCCACACAGAAC...TGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CCA 90 bp CGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCGTTCTGTGTGGCCACTaGGAGGCAGCTTTGGTGAAG +
Preference number: 2 (lower is better)
Translates to: RELSRHSSACGKVSTWASVLCGH*EAALVK
Trigger: CTTCACCAAAGCTGCCTCCCAGTGGCCACACAGAAC...GCTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR GCA 90 bp AACACCTCTGAGGAGGCAAGCTGCTCCCGGCCTGGGCCACGAGGTTGCATCAAGTTCAAGACATTCATCTaGCTGTGGCAAGGTCAGCAC +
Preference number: 2 (lower is better)
Translates to: NTSEEASCSRPGPRGCIKFKTFI*LWQGQH
Trigger: GTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAA...CTTGATGCAACCTCGTGGCCCAGGCCGGGAGCAGCTTGCCTCCTCAGAGGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CCA 90 bp GCTTCCAAGATCACACAAGATCAGGGGCGTTCAGGGTGCTGTGGCCACAGACCAAGACCACGCAGTCCCTaGACCTTGCAAGCACATCTC +
Preference number: 2 (lower is better)
Translates to: ASKITQDQGRSGCCGHRPRPRSP*TLQAHL
Trigger: GAGATGTGCTTGCAAGGTCCAGGGACTGCGTGGTCT...TGGTCTGTGGCCACAGCACCCTGAACGCCCCTGATCTTGTGTGATCTTGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CCA 90 bp AACACCTCTGAGGAGGCAAGCTGCTCCCGGCCTGGGCCACGAGGTTGCATCAAGCCCACGGGTGTATCCTaGTCTAGGACGATTTTTCTT +
Preference number: 2 (lower is better)
Translates to: NTSEEASCSRPGPRGCIKPTGVS*SRTIFL
Trigger: AAGAAAAATCGTCCTAGACCAGGATACACCCGTGGG...CTTGATGCAACCTCGTGGCCCAGGCCGGGAGCAGCTTGCCTCCTCAGAGGTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR TCA 90 bp TTAACGGTTACCAAGAACACCCAGATAGTCAACACCTCTGAGGAGGCAAGCTGCGGGAGGCAGCTTTGGTaGAGGGCATGGTCACCTCCG +
Preference number: 2 (lower is better)
Translates to: LTVTKNTQIVNTSEEASCGRQLW*RAWSPP
Trigger: CGGAGGTGACCATGCCCTTCACCAAAGCTGCCTCCC...GCAGCTTGCCTCCTCAGAGGTGTTGACTATCTGGGTGTTCTTGGTAACCGTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CCA 90 bp GGGAGGAGGGAGGAGGAGCTGTCCCTGTACTCAAGGTTCAGAGATTTGGCCTGTTTGCATCAAGGAACATaGGCCTCCAGGAGTCCCTTC +
Preference number: 2 (lower is better)
Translates to: GRREEELSLYSRFRDLACLHQGT*ASRSPF
Trigger: GAAGGGACTCCTGGAGGCCCATGTTCCTTGATGCAA...ACAGGCCAAATCTCTGAACCTTGAGTACAGGGACAGCTCCTCCTCCCTCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CCA 90 bp GCTACTGGAGACTCAGGGCTTGCAGCTGAGAAAGACAGAGTTAACGGTTACCAAGAGGAGCATCTCAGCTaGCAGACCACGCAGTCCCTG +
Preference number: 2 (lower is better)
Translates to: ATGDSGLAAEKDRVNGYQEEHLS*QTTQSL
Trigger: CAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTC...TTGGTAACCGTTAACTCTGTCTTTCTCAGCTGCAAGCCCTGAGTCTCCAGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CCA 90 bp TTAACGGTTACCAAGAACACCCAGATAGTCAACACCTCTGAGGAGGCAAGCTGCGAGGAGCATCTCAGCTaGCAGACCACGCAGTCCCTG +
Preference number: 2 (lower is better)
Translates to: LTVTKNTQIVNTSEEASCEEHLS*QTTQSL
Trigger: CAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTC...GCAGCTTGCCTCCTCAGAGGTGTTGACTATCTGGGTGTTCTTGGTAACCGTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR GCA 90 bp TTAACGGTTACCAAGAACACCCAGATAGTCAACACCTCTGAGGAGGCAAGCTGCCCTGGGCCACGAGGTTaGATCAAGGAACATGGGCCT +
Preference number: 2 (lower is better)
Translates to: LTVTKNTQIVNTSEEASCPGPRG*IKEHGP
Trigger: AGGCCCATGTTCCTTGATGCAACCTCGTGGCCCAGG...GCAGCTTGCCTCCTCAGAGGTGTTGACTATCTGGGTGTTCTTGGTAACCGTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CCA 90 bp GGTGAAGGGCATGGTCACCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCGGTATGAACAAAAACTaGGTGACTGTGTCTGGCCAC +
Preference number: 2 (lower is better)
Translates to: GEGHGHLRLSLSVAQRMTGMNKN*VTVSGH
Trigger: GTGGCCAGACACAGTCACCCAGTTTTTGTTCATACC...GGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTGACCATGCCCTTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR TCA 90 bp GTCCCTGGACCTTGCAAGCACATCTCTGACCCACCCCATGCTGGAGCCTCTTTCTTCCACAGCGCACCTTaGTTTCATACAGATAATTCC +
Preference number: 2 (lower is better)
Translates to: VPGPCKHISDPPHAGASFFHSAP*FHTDNS
Trigger: GGAATTATCTGTATGAAATCAAGGTGCGCTGTGGAA...GAAAGAGGCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAAGGTCCAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CCA 90 bp AGAAAATTGCTCCCACGGGTGTATCCTGGTCTAGGACGATTTTTCTTTCCTTCCGAGGAGCATCTCAGCTaGCAGACCACGCAGTCCCTG +
Preference number: 2 (lower is better)
Translates to: RKLLPRVYPGLGRFFFPSEEHLS*QTTQSL
Trigger: CAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTC...GGAAGGAAAGAAAAATCGTCCTAGACCAGGATACACCCGTGGGAGCAATTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CCA 90 bp GCTACTGGAGACTCAGGGCTTGCAGCTGAGAAAGACAGAGTTAACGGTTACCAAACATTCATCTGCCTGTaGCAAGGTCAGCACCTGGGC +
Preference number: 2 (lower is better)
Translates to: ATGDSGLAAEKDRVNGYQTFICL*QGQHLG
Trigger: GCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGT...TTGGTAACCGTTAACTCTGTCTTTCTCAGCTGCAAGCCCTGAGTCTCCAGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR CAA 90 bp GGAGGAGGAGCTGTCCCTGTACTCAAGGTTCAGAGATTTGGCCTGTaGAAAAGTCAGGTGAATTCAGCTACTGGAGACTCAGGGCTTGCA +
Preference number: 2 (lower is better)
Translates to: GGGAVPVLKVQRFGL*KSQVNSATGDSGLA
Trigger: TGCAAGCCCTGAGTCTCCAGTAGCTGAATTCACCTGACTTTTCAACAGGCCAAATCTCTGAACCTTGAGTACAGGGACAGCTCCTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR TCA 90 bp GGTGAAGGGCATGGTCACCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCTTCCACAGCGCACCTTaGTTTCATACAGATAATTCC +
Preference number: 2 (lower is better)
Translates to: GEGHGHLRLSLSVAQRMTFHSAP*FHTDNS
Trigger: GGAATTATCTGTATGAAATCAAGGTGCGCTGTGGAA...GGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTGACCATGCCCTTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CCA 90 bp CTTCTTGTTCATTCCAGCGCCTCCTCTGTGAAGCTACAGACAGTAGAGAAAATTCTGGGTGACTGTGTCTaGCCACGTACCCTACCACCC +
Preference number: 2 (lower is better)
Translates to: LLVHSSASSVKLQTVEKILGDCV*PRTLPP
Trigger: GGGTGGTAGGGTACGTGGCCAGACACAGTCACCCAG...AATTTTCTCTACTGTCTGTAGCTTCACAGAGGAGGCGCTGGAATGAACAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CCA 90 bp ACGGTTACCAAGAACACCCAGATAGTCAACACCTCTGAGGAGGCAAGCTGCTCCGGTATGAACAAAAACTaGGTGACTGTGTCTGGCCAC +
Preference number: 2 (lower is better)
Translates to: TVTKNTQIVNTSEEASCSGMNKN*VTVSGH
Trigger: GTGGCCAGACACAGTCACCCAGTTTTTGTTCATACC...GGAGCAGCTTGCCTCCTCAGAGGTGTTGACTATCTGGGTGTTCTTGGTAACCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR GCA 90 bp TTAACGGTTACCAAGAACACCCAGATAGTCAACACCTCTGAGGAGGCAAGCTGCGACAGTAGAGAAAATTaGTCCCACGGGTGTATCCTG +
Preference number: 2 (lower is better)
Translates to: LTVTKNTQIVNTSEEASCDSREN*SHGCIL
Trigger: CAGGATACACCCGTGGGAGCAATTTTCTCTACTGTC...GCAGCTTGCCTCCTCAGAGGTGTTGACTATCTGGGTGTTCTTGGTAACCGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR GCA 90 bp AAGCACACTTACACGCACGCACTCCTCAAACCCCTAATACTTCGGTTACCTTCATTCAAGACATTCATCTaGCTGTGGCAAGGTCAGCAC +
Preference number: 2 (lower is better)
Translates to: KHTYTHALLKPLILRLPSFKTFI*LWQGQH
Trigger: GTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAA...TGAAGGTAACCGAAGTATTAGGGGTTTGAGGAGTGCGTGCGTGTAAGTGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CCA 90 bp CACCACAAAGGAACATGGACTTTAAAGTCCCTGGACAACTTCACAATGACGATAACATTCATCTGCCTGTaGCAAGGTCAGCACCTGGGC +
Preference number: 2 (lower is better)
Translates to: HHKGTWTLKSLDNFTMTITFICL*QGQHLG
Trigger: GCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGT...TATCGTCATTGTGAAGTTGTCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR TCA 90 bp GGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGGGTGAATTATTGAGACTTAATTCCATTTaGTTGCACCTCTGCAAACGT +
Preference number: 2 (lower is better)
Translates to: GDCVWPRTLPPTKLGELLRLNSI*LHLCKR
Trigger: ACGTTTGCAGAGGTGCAATCAAATGGAATTAAGTCT...CAATAATTCACCCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR TCA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACAGACTTAATTCCATTTaGTTGCACCTCTGCAAACGT +
Preference number: 2 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYRLNSI*LHLCKR
Trigger: ACGTTTGCAGAGGTGCAATCAAATGGAATTAAGTCT...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR TCA 90 bp GTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTTTCCACAGCGCACCTTaGTTTCATACAGATAATTCC +
Preference number: 2 (lower is better)
Translates to: VSSSTHDPGMNKNWVTVSFHSAP*FHTDNS
Trigger: GGAATTATCTGTATGAAATCAAGGTGCGCTGTGGAA...AGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR TCA 90 bp GTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTAGACTTAATTCCATTTaGTTGCACCTCTGCAAACGT +
Preference number: 2 (lower is better)
Translates to: VSSSTHDPGMNKNWVTVSRLNSI*LHLCKR
Trigger: ACGTTTGCAGAGGTGCAATCAAATGGAATTAAGTCT...AGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR TCA 90 bp CTTCTTGTTCATTCCAGCGCCTCCTCTGTGAAGCTACAGACAGTAGAGAAAATTTTCCACAGCGCACCTTaGTTTCATACAGATAATTCC +
Preference number: 2 (lower is better)
Translates to: LLVHSSASSVKLQTVEKIFHSAP*FHTDNS
Trigger: GGAATTATCTGTATGAAATCAAGGTGCGCTGTGGAA...AATTTTCTCTACTGTCTGTAGCTTCACAGAGGAGGCGCTGGAATGAACAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR TCA 90 bp CACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCAAGACTTAATTCCATTTaGTTGCACCTCTGCAAACGT +
Preference number: 2 (lower is better)
Translates to: HIHTHKYTHTFPQKEVLPRLNSI*LHLCKR
Trigger: ACGTTTGCAGAGGTGCAATCAAATGGAATTAAGTCT...TGGCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR TCA 90 bp AACTATTTGGAGGTTATTTCACCACAAAGGAACATGGACTTTAAAGTCCCTGGAACTTCTCTCAAAGGTTaGGCAAGACGTGGAGAATCT +
Preference number: 2 (lower is better)
Translates to: NYLEVISPQRNMDFKVPGTSLKG*ARRGES
Trigger: AGATTCTCCACGTCTTGCTCAACCTTTGAGAGAAGT...TCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTGAAATAACCTCCAAATAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR TCA 90 bp ATTGTTTCCACAGCGCACCTTGATTTCATACAGATAATTCCATGCGGGTTTCATAGACTTAATTCCATTTaGTTGCACCTCTGCAAACGT +
Preference number: 2 (lower is better)
Translates to: IVSTAHLDFIQIIPCGFHRLNSI*LHLCKR
Trigger: ACGTTTGCAGAGGTGCAATCAAATGGAATTAAGTCT...ATGAAACCCGCATGGAATTATCTGTATGAAATCAAGGTGCGCTGTGGAAACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR CCA 72 bp GGTCAGCACCTGGGCCAGCCCGAGGAGCATCTCAGCTaGCAGACCACGCAGTCCCTGGACCTTGCAAGCACA +
Preference number: 3 (lower is better)
Translates to: GQHLGQPEEHLS*QTTQSLDLAST
Trigger: TGTGCTTGCAAGGTCCAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTCGGGCTGGCCCAGGTGCTGACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR GCA 72 bp GAGGAGGCAAGCTGCTCCCGGCCTGGGCCACGAGGTTaGATCAAGGAACATGGGCCTCCAGGAGTCCCTTCT +
Preference number: 3 (lower is better)
Translates to: EEASCSRPGPRG*IKEHGPPGVPS
Trigger: AGAAGGGACTCCTGGAGGCCCATGTTCCTTGATGCAACCTCGTGGCCCAGGCCGGGAGCAGCTTGCCTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CAA 90 bp CCCGAGGAGCATCTCAGCTGGCAGACCACGCAGTCCCTGGACCTTGCAAGCACACACTGGGAGGCAGCTTaGGTGAAGGGCATGGTCACC +
Preference number: 3 (lower is better)
Translates to: PEEHLSWQTTQSLDLASTHWEAA*VKGMVT
Trigger: GGTGACCATGCCCTTCACCAAAGCTGCCTCCCAGTG...TGTGCTTGCAAGGTCCAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR CCA 72 bp CAGGTGAGTCCAGCAGGGAGAGTTCTGTGTGGCCACTaGGAGGCAGCTTTGGTGAAGGGCATGGTCACCTCC +
Preference number: 3 (lower is better)
Translates to: QVSPAGRVLCGH*EAALVKGMVTS
Trigger: GGAGGTGACCATGCCCTTCACCAAAGCTGCCTCCCAGTGGCCACACAGAACTCTCCCTGCTGGACTCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CAA 90 bp AACACCTCTGAGGAGGCAAGCTGCTCCCGGCCTGGGCCACGAGGTTGCATCAAGCACCTCCGCCTGAGTTaGTCAGTAGCTCAACGCATG +
Preference number: 3 (lower is better)
Translates to: NTSEEASCSRPGPRGCIKHLRLS*SVAQRM
Trigger: CATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTG...CTTGATGCAACCTCGTGGCCCAGGCCGGGAGCAGCTTGCCTCCTCAGAGGTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR TCA 72 bp AGACCACGCAGTCCCTGGACCTTGCAAGCACATCTCTaGCCCACCCCATGCTGGAGCCTCTTTCCTCAGGTG +
Preference number: 3 (lower is better)
Translates to: RPRSPWTLQAHL*PTPCWSLFPQV
Trigger: CACCTGAGGAAAGAGGCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAAGGTCCAGGGACTGCGTGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CAA 90 bp CTTTCCTCAGGTGAGTCCAGCAGGGAGAGTTCTGTGTGGCCACTGGGAGGCAGCCACCTCCGCCTGAGTTaGTCAGTAGCTCAACGCATG +
Preference number: 3 (lower is better)
Translates to: LSSGESSRESSVWPLGGSHLRLS*SVAQRM
Trigger: CATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTG...GCTGCCTCCCAGTGGCCACACAGAACTCTCCCTGCTGGACTCACCTGAGGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CAA 90 bp GCCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCCACCTCCGCCTGAGTTaGTCAGTAGCTCAACGCATG +
Preference number: 3 (lower is better)
Translates to: ARELSRHSSACGKVSTWAHLRLS*SVAQRM
Trigger: CATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTG...GGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR GCA 72 bp AACACCCAGATAGTCAACACCTCTGAGGAGGCAAGCTaGTCCCGGCCTGGGCCACGAGGTTGCATCAAGGAA +
Preference number: 3 (lower is better)
Translates to: NTQIVNTSEEAS*SRPGPRGCIKE
Trigger: TTCCTTGATGCAACCTCGTGGCCCAGGCCGGGAGCAGCTTGCCTCCTCAGAGGTGTTGACTATCTGGGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR CCA 72 bp CTTTCCTCAGGTGAGTCCAGCAGGGAGAGTTCTGTGTaGCCACTGGGAGGCAGCTTTGGTGAAGGGCATGGT +
Preference number: 3 (lower is better)
Translates to: LSSGESSRESSV*PLGGSFGEGHG
Trigger: ACCATGCCCTTCACCAAAGCTGCCTCCCAGTGGCCACACAGAACTCTCCCTGCTGGACTCACCTGAGGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CAA 90 bp GGGAGGAGGGAGGAGGAGCTGTCCCTGTACTCAAGGTTCAGAGATTTGGCCTGTCTGGAGACTCAGGGCTaGCAGCTGAGAAAGACAGAG +
Preference number: 3 (lower is better)
Translates to: GRREEELSLYSRFRDLACLETQG*QLRKTE
Trigger: CTCTGTCTTTCTCAGCTGCAAGCCCTGAGTCTCCAG...ACAGGCCAAATCTCTGAACCTTGAGTACAGGGACAGCTCCTCCTCCCTCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR TCA 72 bp TCTATGGCCAGGTGTCCCTTCTTCCCTTCCGCGTACTaGCCGGGCCCAACCAAGCTTAGCTTCCAAGATCAC +
Preference number: 3 (lower is better)
Translates to: SMARCPFFPSAY*PGPTKLSFQDH
Trigger: GTGATCTTGGAAGCTAAGCTTGGTTGGGCCCGGTCAGTACGCGGAAGGGAAGAAGGGACACCTGGCCATAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CAA 90 bp GCCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAAACTGGGTGAATTATaGTTTCCACAGCGCACCTTG +
Preference number: 3 (lower is better)
Translates to: ARELSRHSSACGKVSTWAKLGEL*FPQRTL
Trigger: CAAGGTGCGCTGTGGAAACAATAATTCACCCAGTTT...GGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR CCA 72 bp TCCAGGAACACAGCAAACACCCTCAGCTGTTTTCTATaGCCAGGTGTCCCTTCTTCCCTTCCGCGTACTGAC +
Preference number: 3 (lower is better)
Translates to: SRNTANTLSCFL*PGVPSSLPRTD
Trigger: GTCAGTACGCGGAAGGGAAGAAGGGACACCTGGCCATAGAAAACAGCTGAGGGTGTTTGCTGTGTTCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR GCA 72 bp GCTTCCAAGATCACACAAGATCAGGGGCGTTCAGGGTaGTGTGGCCACAGACCAGATGTCTCTTCTTGTTCA +
Preference number: 3 (lower is better)
Translates to: ASKITQDQGRSG*CGHRPDVSSCS
Trigger: TGAACAAGAAGAGACATCTGGTCTGTGGCCACAGCACCCTGAACGCCCCTGATCTTGTGTGATCTTGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR CCA 72 bp AGTAGCTCAACGCATGACCCTGGTATGAACAAAAACTaGGTGACTGTGTCTGGCCACGTACCCTACCACCCA +
Preference number: 3 (lower is better)
Translates to: SSSTHDPGMNKN*VTVSGHVPYHP
Trigger: TGGGTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CAA 90 bp GGTGTCCCTTCTTCCCTTCCGCGTACTGACCGGGCCCAACCAAGCTTAGCTTCCTTTGGGACAGTGAAATaGACAATGCAGTTTCTTCAC +
Preference number: 3 (lower is better)
Translates to: GVPSSLPRTDRAQPSLASFGTVK*TMQFLH
Trigger: GTGAAGAAACTGCATTGTCAATTTCACTGTCCCAAA...GGAAGCTAAGCTTGGTTGGGCCCGGTCAGTACGCGGAAGGGAAGAAGGGACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CAA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACAAACTGGGTGAATTATaGTTTCCACAGCGCACCTTG +
Preference number: 3 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYKLGEL*FPQRTL
Trigger: CAAGGTGCGCTGTGGAAACAATAATTCACCCAGTTT...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CAA 90 bp GACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACTTTGGGACAGTGAAATaGACAATGCAGTTTCTTCAC +
Preference number: 3 (lower is better)
Translates to: DPGMNKNWVTVSGHVPYHFGTVK*TMQFLH
Trigger: GTGAAGAAACTGCATTGTCAATTTCACTGTCCCAAA...GTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CAA 90 bp CCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACAAACTGGGTGAATTATaGTTTCCACAGCGCACCTTG +
Preference number: 3 (lower is better)
Translates to: PPPEFVSSSTHDPGMNKNKLGEL*FPQRTL
Trigger: CAAGGTGCGCTGTGGAAACAATAATTCACCCAGTTT...GTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CAA 90 bp CACCACAAAGGAACATGGACTTTAAAGTCCCTGGACAACTTCACAATGACGATAACCAGATGTCTCTTCTaGTTCATTCCAGCGCCTCCT +
Preference number: 3 (lower is better)
Translates to: HHKGTWTLKSLDNFTMTITRCLF*FIPAPP
Trigger: AGGAGGCGCTGGAATGAACAAGAAGAGACATCTGGT...TATCGTCATTGTGAAGTTGTCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CAA 90 bp AAGCACACTTACACGCACGCACTCCTCAAACCCCTAATACTTCGGTTACCTTCATTTGGGACAGTGAAATaGACAATGCAGTTTCTTCAC +
Preference number: 3 (lower is better)
Translates to: KHTYTHALLKPLILRLPSFGTVK*TMQFLH
Trigger: GTGAAGAAACTGCATTGTCAATTTCACTGTCCCAAA...TGAAGGTAACCGAAGTATTAGGGGTTTGAGGAGTGCGTGCGTGTAAGTGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CAA 90 bp AGAAAATTGCTCCCACGGGTGTATCCTGGTCTAGGACGATTTTTCTTTCCTTCCTTTGGGACAGTGAAATaGACAATGCAGTTTCTTCAC +
Preference number: 3 (lower is better)
Translates to: RKLLPRVYPGLGRFFFPSFGTVK*TMQFLH
Trigger: GTGAAGAAACTGCATTGTCAATTTCACTGTCCCAAA...GGAAGGAAAGAAAAATCGTCCTAGACCAGGATACACCCGTGGGAGCAATTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CAA 90 bp CACCACAAAGGAACATGGACTTTAAAGTCCCTGGACAACTTCACAATGACGATACAGAGATTTGGCCTGTaGAAAAGTCAGGTGAATTCA +
Preference number: 3 (lower is better)
Translates to: HHKGTWTLKSLDNFTMTIQRFGL*KSQVNS
Trigger: TGAATTCACCTGACTTTTCAACAGGCCAAATCTCTG...TATCGTCATTGTGAAGTTGTCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR-3UTR CAA 90 bp CACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCATTTGGGACAGTGAAATaGACAATGCAGTTTCTTCAC +
Preference number: 3 (lower is better)
Translates to: HIHTHKYTHTFPQKEVLPFGTVK*TMQFLH
Trigger: GTGAAGAAACTGCATTGTCAATTTCACTGTCCCAAA...TGGCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR TCA 72 bp CTAAACTGGGTGAATTATTGTTTCCACAGCGCACCTTaGTTTCATACAGATAATTCCATGCGGGTTTCATAC +
Preference number: 3 (lower is better)
Translates to: LNWVNYCFHSAP*FHTDNSMRVSY
Trigger: GTATGAAACCCGCATGGAATTATCTGTATGAAATCAAGGTGCGCTGTGGAAACAATAATTCACCCAGTTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR CCA 72 bp CAAACTATTTGGAGGTTATTTCACCACAAAGGAACATaGACTTTAAAGTCCCTGGACAACTTCACAATGACG +
Preference number: 3 (lower is better)
Translates to: QTIWRLFHHKGT*TLKSLDNFTMT
Trigger: CGTCATTGTGAAGTTGTCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTGAAATAACCTCCAAATAGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
3UTR TCA 72 bp AAGCAAATACAAGAATCTGAAACTTCTCTCAAAGGTTaGGCAAGACGTGGAGAATCTTTTAATGTCGCATTA +
Preference number: 3 (lower is better)
Translates to: KQIQESETSLKG*ARRGESFNVAL
Trigger: TAATGCGACATTAAAAGATTCTCCACGTCTTGCTCAACCTTTGAGAGAAGTTTCAGATTCTTGTATTTGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCCGAGGAGCATCTCAGCTGGCAGACCACGCAGTCCCTGGACCTTGCAAGCACAGCGCTACCGTGGGCCTaGGCCGTGGAGACTGCGACC +
Preference number: 4 (lower is better)
Translates to: PEEHLSWQTTQSLDLASTALPWA*AVETAT
Trigger: GGTCGCAGTCTCCACGGCGCAGGCCCACGGTAGCGC...TGTGCTTGCAAGGTCCAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GCCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCGGCCTCTGCCAACGATaGCACCGCCTGGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: ARELSRHSSACGKVSTWAGLCQR*HRLGGL
Trigger: GAGGCCACCCAGGCGGTGGCATCGTTGGCAGAGGCC...GGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCCGAGGAGCATCTCAGCTGGCAGACCACGCAGTCCCTGGACCTTGCAAGCACACATGGCCACCTGCACTaGTCCGTTGCCCTGGGCGAG +
Preference number: 4 (lower is better)
Translates to: PEEHLSWQTTQSLDLASTHGHLH*SVALGE
Trigger: CTCGCCCAGGGCAACGGACCAGTGCAGGTGGCCATG...TGTGCTTGCAAGGTCCAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CTTTCCTCAGGTGAGTCCAGCAGGGAGAGTTCTGTGTGGCCACTGGGAGGCAGCCCCTGCTGCATCTCCTaGGAAGCTGCCACTGCGGCC +
Preference number: 4 (lower is better)
Translates to: LSSGESSRESSVWPLGGSPCCIS*EAATAA
Trigger: GGCCGCAGTGGCAGCTTCTCAGGAGATGCAGCAGGG...GCTGCCTCCCAGTGGCCACACAGAACTCTCCCTGCTGGACTCACCTGAGGAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp GGTGTCCCTTCTTCCCTTCCGCGTACTGACCGGGCCCAACCAAGCTTAGCTTCCCCCTGCTGCATCTCCTaGGAAGCTGCCACTGCGGCC +
Preference number: 4 (lower is better)
Translates to: GVPSSLPRTDRAQPSLASPCCIS*EAATAA
Trigger: GGCCGCAGTGGCAGCTTCTCAGGAGATGCAGCAGGG...GGAAGCTAAGCTTGGTTGGGCCCGGTCAGTACGCGGAAGGGAAGAAGGGACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CTTTCCTCAGGTGAGTCCAGCAGGGAGAGTTCTGTGTGGCCACTGGGAGGCAGCTGCCACTGCGGCCTCTaGCAACGATGCCACCGCCTG +
Preference number: 4 (lower is better)
Translates to: LSSGESSRESSVWPLGGSCHCGL*QRCHRL
Trigger: CAGGCGGTGGCATCGTTGGCAGAGGCCGCAGTGGCA...GCTGCCTCCCAGTGGCCACACAGAACTCTCCCTGCTGGACTCACCTGAGGAAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp GCCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCCGCCTGGGTGGCCTCTaGTGCTTGCGTCGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: ARELSRHSSACGKVSTWARLGGL*CLRRLD
Trigger: ATCCAGACGACGCAAGCATCAGAGGCCACCCAGGCG...GGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CTTTCCTCAGGTGAGTCCAGCAGGGAGAGTTCTGTGTGGCCACTGGGAGGCAGCGGGAGGCAGCTTTGGTaGAGGGCATGGTCACCTCCG +
Preference number: 4 (lower is better)
Translates to: LSSGESSRESSVWPLGGSGRQLW*RAWSPP
Trigger: CGGAGGTGACCATGCCCTTCACCAAAGCTGCCTCCC...GCTGCCTCCCAGTGGCCACACAGAACTCTCCCTGCTGGACTCACCTGAGGAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GGTGAAGGGCATGGTCACCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCGGCCTCTGCCAACGATaGCACCGCCTGGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GEGHGHLRLSLSVAQRMTGLCQR*HRLGGL
Trigger: GAGGCCACCCAGGCGGTGGCATCGTTGGCAGAGGCC...GGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTGACCATGCCCTTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGTGCCACTGCGGCCTCTaGCAACGATGCCACCGCCTG +
Preference number: 4 (lower is better)
Translates to: PGAFKTFICLWQGQHLGQCHCGL*QRCHRL
Trigger: CAGGCGGTGGCATCGTTGGCAGAGGCCGCAGTGGCA...CTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GTCCCTGGACCTTGCAAGCACATCTCTGACCCACCCCATGCTGGAGCCTCTTTCCCTGCACTGGTCCGTTaGCCTGGGCGAGGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: VPGPCKHISDPPHAGASFPALVR*PGRGWS
Trigger: TGACCAGCCTCGCCCAGGGCAACGGACCAGTGCAGG...GAAAGAGGCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAAGGTCCAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCATCTGAGGAGGCAAGCTaGTCCCGGCCTGGGCCACGA +
Preference number: 4 (lower is better)
Translates to: PGSFQDIHLPVARSAPGPSEEAS*SRPGPR
Trigger: TCGTGGCCCAGGCCGGGAGCAGCTTGCCTCCTCAGA...TGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGTCTGAGGAGGCAAGCTaGTCCCGGCCTGGGCCACGA +
Preference number: 4 (lower is better)
Translates to: PGAFKTFICLWQGQHLGQSEEAS*SRPGPR
Trigger: TCGTGGCCCAGGCCGGGAGCAGCTTGCCTCCTCAGA...CTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GCCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCATGCCACCGCCTGGGTaGCCTCTGATGCTTGCGTCG +
Preference number: 4 (lower is better)
Translates to: ARELSRHSSACGKVSTWAMPPPG*PLMLAS
Trigger: CGACGCAAGCATCAGAGGCCACCCAGGCGGTGGCAT...GGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CTTTCCTCAGGTGAGTCCAGCAGGGAGAGTTCTGTGTGGCCACTGGGAGGCAGCCCCCACCTTGTAAGGTaGCCTCAGCCAGGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: LSSGESSRESSVWPLGGSPHLVR*PQPGWR
Trigger: TCGCCACCCTGGCTGAGGCCACCTTACAAGGTGGGG...GCTGCCTCCCAGTGGCCACACAGAACTCTCCCTGCTGGACTCACCTGAGGAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCATGGCCACCTGCACTaGTCCGTTGCCCTGGGCGAG +
Preference number: 4 (lower is better)
Translates to: PGAFKTFICLWQGQHLGQHGHLH*SVALGE
Trigger: CTCGCCCAGGGCAACGGACCAGTGCAGGTGGCCATG...CTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCCGCCTGGGTGGCCTCTaGTGCTTGCGTCGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: RELSRHSSACGKVSTWASRLGGL*CLRRLD
Trigger: ATCCAGACGACGCAAGCATCAGAGGCCACCCAGGCG...GCTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CCCGAGGAGCATCTCAGCTGGCAGACCACGCAGTCCCTGGACCTTGCAAGCACAGGTGACTGCGCTGTCTaGTATCCTGGTGGTCACAGG +
Preference number: 4 (lower is better)
Translates to: PEEHLSWQTTQSLDLASTGDCAV*YPGGHR
Trigger: CCTGTGACCACCAGGATATCAGACAGCGCAGTCACC...TGTGCTTGCAAGGTCCAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGGGGAGGCAGCTTTGGTaGAGGGCATGGTCACCTCCG +
Preference number: 4 (lower is better)
Translates to: PGAFKTFICLWQGQHLGQGRQLW*RAWSPP
Trigger: CGGAGGTGACCATGCCCTTCACCAAAGCTGCCTCCC...CTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGGGAGGCAGCTTTGGTaGAGGGCATGGTCACCTCCG +
Preference number: 4 (lower is better)
Translates to: PGSFQDIHLPVARSAPGPGRQLW*RAWSPP
Trigger: CGGAGGTGACCATGCCCTTCACCAAAGCTGCCTCCC...TGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp AACACCTCTGAGGAGGCAAGCTGCTCCCGGCCTGGGCCACGAGGTTGCATCAAGCCGTTTCTTTCCTGTTaGCACAGCAGCAGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: NTSEEASCSRPGPRGCIKPFLSC*HSSSSG
Trigger: GCCGCTGCTGCTGCTGTGGCAACAGGAAAGAAACGG...CTTGATGCAACCTCGTGGCCCAGGCCGGGAGCAGCTTGCCTCCTCAGAGGTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GTCCCTGGACCTTGCAAGCACATCTCTGACCCACCCCATGCTGGAGCCTCTTTCCGCAGGGGCGTGTTCTaGCAGAGCAGACTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: VPGPCKHISDPPHAGASFRRGVF*QSRLQV
Trigger: GACCTGGAGTCTGCTCTGGCAGAACACGCCCCTGCG...GAAAGAGGCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAAGGTCCAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GCTTCCAAGATCACACAAGATCAGGGGCGTTCAGGGTGCTGTGGCCACAGACCATGCCACTGCGGCCTCTaGCAACGATGCCACCGCCTG +
Preference number: 4 (lower is better)
Translates to: ASKITQDQGRSGCCGHRPCHCGL*QRCHRL
Trigger: CAGGCGGTGGCATCGTTGGCAGAGGCCGCAGTGGCA...TGGTCTGTGGCCACAGCACCCTGAACGCCCCTGATCTTGTGTGATCTTGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GCCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCTGCTCCGACGGCTGCTaGGGTTTCCCCAGACAAGAC +
Preference number: 4 (lower is better)
Translates to: ARELSRHSSACGKVSTWACSDGC*GFPRQD
Trigger: GTCTTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCA...GGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCCGAGGAGCATCTCAGCTGGCAGACCACGCAGTCCCTGGACCTTGCAAGCACAAAGTGCTCCGACGGCTaGTGCGGTTTCCCCAGACAA +
Preference number: 4 (lower is better)
Translates to: PEEHLSWQTTQSLDLASTKCSDG*CGFPRQ
Trigger: TTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCACTT...TGTGCTTGCAAGGTCCAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GGGAGGAGGGAGGAGGAGCTGTCCCTGTACTCAAGGTTCAGAGATTTGGCCTGTCCTGCACTGGTCCGTTaGCCTGGGCGAGGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: GRREEELSLYSRFRDLACPALVR*PGRGWS
Trigger: TGACCAGCCTCGCCCAGGGCAACGGACCAGTGCAGG...ACAGGCCAAATCTCTGAACCTTGAGTACAGGGACAGCTCCTCCTCCCTCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GCTTCCAAGATCACACAAGATCAGGGGCGTTCAGGGTGCTGTGGCCACAGACCATCTGAGGAGGCAAGCTaGTCCCGGCCTGGGCCACGA +
Preference number: 4 (lower is better)
Translates to: ASKITQDQGRSGCCGHRPSEEAS*SRPGPR
Trigger: TCGTGGCCCAGGCCGGGAGCAGCTTGCCTCCTCAGA...TGGTCTGTGGCCACAGCACCCTGAACGCCCCTGATCTTGTGTGATCTTGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAATGCCACCGCCTGGGTaGCCTCTGATGCTTGCGTCG +
Preference number: 4 (lower is better)
Translates to: PGSFQDIHLPVARSAPGPMPPPG*PLMLAS
Trigger: CGACGCAAGCATCAGAGGCCACCCAGGCGGTGGCAT...TGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGTGTCCCTTCTTCCCTTCCGCGTACTGACCGGGCCCAACCAAGCTTAGCTTCCAACGATGCCACCGCCTaGGTGGCCTCTGATGCTTGC +
Preference number: 4 (lower is better)
Translates to: GVPSSLPRTDRAQPSLASNDATA*VASDAC
Trigger: GCAAGCATCAGAGGCCACCCAGGCGGTGGCATCGTT...GGAAGCTAAGCTTGGTTGGGCCCGGTCAGTACGCGGAAGGGAAGAAGGGACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGACTGGTCCGTTGCCCTaGGCGAGGCTGGTCACCACA +
Preference number: 4 (lower is better)
Translates to: PGAFKTFICLWQGQHLGQTGPLP*ARLVTT
Trigger: TGTGGTGACCAGCCTCGCCCAGGGCAACGGACCAGT...CTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGTGAAGGGCATGGTCACCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCCATGGCCACCTGCACTaGTCCGTTGCCCTGGGCGAG +
Preference number: 4 (lower is better)
Translates to: GEGHGHLRLSLSVAQRMTHGHLH*SVALGE
Trigger: CTCGCCCAGGGCAACGGACCAGTGCAGGTGGCCATG...GGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTGACCATGCCCTTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCCGAGGAGCATCTCAGCTGGCAGACCACGCAGTCCCTGGACCTTGCAAGCACACGCTGTCTGATATCCTaGTGGTCACAGGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: PEEHLSWQTTQSLDLASTRCLIS*WSQGPW
Trigger: CCATGGCCCCTGTGACCACCAGGATATCAGACAGCG...TGTGCTTGCAAGGTCCAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CTTTCCTCAGGTGAGTCCAGCAGGGAGAGTTCTGTGTGGCCACTGGGAGGCAGCACCACCTCCACAGCTTaGCCGTCCATGGTGACTGCG +
Preference number: 4 (lower is better)
Translates to: LSSGESSRESSVWPLGGSTTSTA*PSMVTA
Trigger: CGCAGTCACCATGGACGGCCAAGCTGTGGAGGTGGT...GCTGCCTCCCAGTGGCCACACAGAACTCTCCCTGCTGGACTCACCTGAGGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp GGTGTCCCTTCTTCCCTTCCGCGTACTGACCGGGCCCAACCAAGCTTAGCTTCCCCTGCAGCTGCCAGATaGGCTGTCACCTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: GVPSSLPRTDRAQPSLASPAAAR*AVTSSA
Trigger: AGCTGATGAGGTGACAGCTCATCTGGCAGCTGCAGG...GGAAGCTAAGCTTGGTTGGGCCCGGTCAGTACGCGGAAGGGAAGAAGGGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGGAGAGGCGGCAGTTCTaGGTTAACCTCCTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: PGAFKTFICLWQGQHLGQERRQF*VNLLWR
Trigger: GCGCCACAGGAGGTTAACTCAGAACTGCCGCCTCTC...CTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp GCCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCGGTGACTGCGCTGTCTaGTATCCTGGTGGTCACAGG +
Preference number: 4 (lower is better)
Translates to: ARELSRHSSACGKVSTWAGDCAV*YPGGHR
Trigger: CCTGTGACCACCAGGATATCAGACAGCGCAGTCACC...GGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp GCCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCCTTGGCCGTCCATGGTaGCTGCGCTGTCTGATATCC +
Preference number: 4 (lower is better)
Translates to: ARELSRHSSACGKVSTWALGRPW*LRCLIS
Trigger: GGATATCAGACAGCGCAGTCACCATGGACGGCCAAG...GGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp GGGAGGAGGGAGGAGGAGCTGTCCCTGTACTCAAGGTTCAGAGATTTGGCCTGTGGGAGGCAGCTTTGGTaGAGGGCATGGTCACCTCCG +
Preference number: 4 (lower is better)
Translates to: GRREEELSLYSRFRDLACGRQLW*RAWSPP
Trigger: CGGAGGTGACCATGCCCTTCACCAAAGCTGCCTCCC...ACAGGCCAAATCTCTGAACCTTGAGTACAGGGACAGCTCCTCCTCCCTCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CTTTCCTCAGGTGAGTCCAGCAGGGAGAGTTCTGTGTGGCCACTGGGAGGCAGCTTGCAAGCACATCTCTaGCCCACCCCATGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LSSGESSRESSVWPLGGSLQAHL*PTPCWS
Trigger: GCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAA...GCTGCCTCCCAGTGGCCACACAGAACTCTCCCTGCTGGACTCACCTGAGGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGGGTGAATTATTGGCGCTACCGTGGGCCTaGGCCGTGGAGACTGCGACC +
Preference number: 4 (lower is better)
Translates to: GDCVWPRTLPPTKLGELLALPWA*AVETAT
Trigger: GGTCGCAGTCTCCACGGCGCAGGCCCACGGTAGCGC...CAATAATTCACCCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACGCGCTACCGTGGGCCTaGGCCGTGGAGACTGCGACC +
Preference number: 4 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYALPWA*AVETAT
Trigger: GGTCGCAGTCTCCACGGCGCAGGCCCACGGTAGCGC...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCGCCACATGGACCTGCTaGACTTGCTGGGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: RELSRHSSACGKVSTWASATWTC*TCWATA
Trigger: TGCAGTGGCCCAGCAAGTGCAGCAGGTCCATGTGGC...GCTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GGTGTCCCTTCTTCCCTTCCGCGTACTGACCGGGCCCAACCAAGCTTAGCTTCCGCCACCAGATGGGCTTaGAGCTTTCTTTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GVPSSLPRTDRAQPSLASATRWA*SFLSPS
Trigger: GCTGGGGGAAAGAAAGCTGCAAGCCCATCTGGTGGC...GGAAGCTAAGCTTGGTTGGGCCCGGTCAGTACGCGGAAGGGAAGAAGGGACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCCTGAGAAGCTGCCACTaGGGCCTCTGCCAACGATGC +
Preference number: 4 (lower is better)
Translates to: RELSRHSSACGKVSTWASLRSCH*GLCQRC
Trigger: GCATCGTTGGCAGAGGCCGCAGTGGCAGCTTCTCAG...GCTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCATGCTCCGACGGCTGCTaGGGTTTCCCCAGACAAGAC +
Preference number: 4 (lower is better)
Translates to: PGSFQDIHLPVARSAPGPCSDGC*GFPRQD
Trigger: GTCTTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCA...TGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GCCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAAGTGCTCCGACGGCTaGTGCGGTTTCCCCAGACAA +
Preference number: 4 (lower is better)
Translates to: ARELSRHSSACGKVSTWAKCSDG*CGFPRQ
Trigger: TTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCACTT...GGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GCCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCTTGGACTCCAGTAAGTaGTCCGACGGCTGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: ARELSRHSSACGKVSTWALDSSK*SDGCCG
Trigger: ACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAA...GGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp ACCCTCAGCTGTTTTCTATGGCCAGGTGTCCCTTCTTCCCTTCCGCGTACTGACCCTGCACTGGTCCGTTaGCCTGGGCGAGGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: TLSCFLWPGVPSSLPRTDPALVR*PGRGWS
Trigger: TGACCAGCCTCGCCCAGGGCAACGGACCAGTGCAGG...GTCAGTACGCGGAAGGGAAGAAGGGACACCTGGCCATAGAAAACAGCTGAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACCCAGGGGCCATGGCCACCTaGACTGGTCCGTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PGMNKNWVTVSGHVPYHPGAMAT*TGPLPW
Trigger: CCAGGGCAACGGACCAGTGCAGGTGGCCATGGCCCC...TGGGTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCCAGGGGCGTTCAGGGTaGTGTGGCCACAGACCAGAT +
Preference number: 4 (lower is better)
Translates to: RELSRHSSACGKVSTWASQGRSG*CGHRPD
Trigger: ATCTGGTCTGTGGCCACAGCACCCTGAACGCCCCTG...GCTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GCCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCGCCCGAAGCTGGGCCTaGGTCATTTTGTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: ARELSRHSSACGKVSTWAARSWA*VILSTE
Trigger: CTCTGTGGACAAAATGACCCAGGCCCAGCTTCGGGC...GGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGTGAAGGGCATGGTCACCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCATGCCACCGCCTGGGTaGCCTCTGATGCTTGCGTCG +
Preference number: 4 (lower is better)
Translates to: GEGHGHLRLSLSVAQRMTMPPPG*PLMLAS
Trigger: CGACGCAAGCATCAGAGGCCACCCAGGCGGTGGCAT...GGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTGACCATGCCCTTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACCCATGGCCTCAGCCAGGGTaGCGACAGCATGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: PGMNKNWVTVSGHVPYHPWPQPG*RQHGRQ
Trigger: CTGCCGCCCATGCTGTCGCCACCCTGGCTGAGGCCA...TGGGTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGGAGGAGGGAGGAGGAGCTGTCCCTGTACTCAAGGTTCAGAGATTTGGCCTGTCCCCACCTTGTAAGGTaGCCTCAGCCAGGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: GRREEELSLYSRFRDLACPHLVR*PQPGWR
Trigger: TCGCCACCCTGGCTGAGGCCACCTTACAAGGTGGGG...ACAGGCCAAATCTCTGAACCTTGAGTACAGGGACAGCTCCTCCTCCCTCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GCTTCCAAGATCACACAAGATCAGGGGCGTTCAGGGTGCTGTGGCCACAGACCACCCCACCTTGTAAGGTaGCCTCAGCCAGGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: ASKITQDQGRSGCCGHRPPHLVR*PQPGWR
Trigger: TCGCCACCCTGGCTGAGGCCACCTTACAAGGTGGGG...TGGTCTGTGGCCACAGCACCCTGAACGCCCCTGATCTTGTGTGATCTTGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCCGAGGAGCATCTCAGCTGGCAGACCACGCAGTCCCTGGACCTTGCAAGCACATGTCTGATATCCTGGTaGTCACAGGGGCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: PEEHLSWQTTQSLDLASTCLISW*SQGPWP
Trigger: TGGCCATGGCCCCTGTGACCACCAGGATATCAGACA...TGTGCTTGCAAGGTCCAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GCCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCCGCTGTCTGATATCCTaGTGGTCACAGGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: ARELSRHSSACGKVSTWARCLIS*WSQGPW
Trigger: CCATGGCCCCTGTGACCACCAGGATATCAGACAGCG...GGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCACTGGGTGACTGTGTCTaGCCACGTACCCTACCACCC +
Preference number: 4 (lower is better)
Translates to: PGSFQDIHLPVARSAPGPLGDCV*PRTLPP
Trigger: GGGTGGTAGGGTACGTGGCCAGACACAGTCACCCAG...TGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GTCCCTGGACCTTGCAAGCACATCTCTGACCCACCCCATGCTGGAGCCTCTTTCCTGGGTGACTGTGTCTaGCCACGTACCCTACCACCC +
Preference number: 4 (lower is better)
Translates to: VPGPCKHISDPPHAGASFLGDCV*PRTLPP
Trigger: GGGTGGTAGGGTACGTGGCCAGACACAGTCACCCAG...GAAAGAGGCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAAGGTCCAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCGAGGAGCATCTCAGCTaGCAGACCACGCAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: RELSRHSSACGKVSTWASEEHLS*QTTQSL
Trigger: CAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTC...GCTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAAAGCTGCTCCCGGCCTaGGCCACGAGGTTGCATCAA +
Preference number: 4 (lower is better)
Translates to: PGSFQDIHLPVARSAPGPKLLPA*ATRLHQ
Trigger: TTGATGCAACCTCGTGGCCCAGGCCGGGAGCAGCTT...TGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp GGTGAAGGGCATGGTCACCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCGAGAGGCGGCAGTTCTaGGTTAACCTCCTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: GEGHGHLRLSLSVAQRMTERRQF*VNLLWR
Trigger: GCGCCACAGGAGGTTAACTCAGAACTGCCGCCTCTC...GGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTGACCATGCCCTTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCGATAGTCAACACCTCTaGGGAGGCAAGCTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: RELSRHSSACGKVSTWASDSQHL*GGKLLP
Trigger: CGGGAGCAGCTTGCCTCCTCAGAGGTGTTGACTATC...GCTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCTCCGTGTTCCTCCATaGAGTTCTCAGAGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: PGAFKTFICLWQGQHLGQLRVPP*SSQSGC
Trigger: GCAGCCGCTCTGAGAACTTCATGGAGGAACACGGAG...CTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393232.6
CDS-3UTR GCA 90 bp AACACCTCTGAGGAGGCAAGCTGCTCCCGGCCTGGGCCACGAGGTTGCATCAAGCACTTGCTGGGCCACTaGATGTGCTTCTATGGTAGC +
Preference number: 4 (lower is better)
Translates to: NTSEEASCSRPGPRGCIKHLLGH*MCFYGS
Trigger: GCTACCATAGAAGCACATGCAGTGGCCCAGCAAGTG...CTTGATGCAACCTCGTGGCCCAGGCCGGGAGCAGCTTGCCTCCTCAGAGGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GGTGAAGGGCATGGTCACCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCGCCACATGGACCTGCTaGACTTGCTGGGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: GEGHGHLRLSLSVAQRMTATWTC*TCWATA
Trigger: TGCAGTGGCCCAGCAAGTGCAGCAGGTCCATGTGGC...GGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTGACCATGCCCTTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGTAGCCACATGGACCTaGTGCACTTGCTGGGCCACT +
Preference number: 4 (lower is better)
Translates to: PGSFQDIHLPVARSAPGPVATWT*CTCWAT
Trigger: AGTGGCCCAGCAAGTGCAGCAGGTCCATGTGGCTAC...TGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GTCCCTGGACCTTGCAAGCACATCTCTGACCCACCCCATGCTGGAGCCTCTTTCCCGTTTCTTTCCTGTTaGCACAGCAGCAGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: VPGPCKHISDPPHAGASFPFLSC*HSSSSG
Trigger: GCCGCTGCTGCTGCTGTGGCAACAGGAAAGAAACGG...GAAAGAGGCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAAGGTCCAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GTCCCTGGACCTTGCAAGCACATCTCTGACCCACCCCATGCTGGAGCCTCTTTCGCCACCAGATGGGCTTaGAGCTTTCTTTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: VPGPCKHISDPPHAGASFATRWA*SFLSPS
Trigger: GCTGGGGGAAAGAAAGCTGCAAGCCCATCTGGTGGC...GAAAGAGGCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAAGGTCCAGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGGCCACCAGATGGGCTTaGAGCTTTCTTTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PGAFKTFICLWQGQHLGQATRWA*SFLSPS
Trigger: GCTGGGGGAAAGAAAGCTGCAAGCCCATCTGGTGGC...CTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACTGCCACTGCGGCCTCTaGCAACGATGCCACCGCCTG +
Preference number: 4 (lower is better)
Translates to: DPGMNKNWVTVSGHVPYHCHCGL*QRCHRL
Trigger: CAGGCGGTGGCATCGTTGGCAGAGGCCGCAGTGGCA...GTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GTCCCTGGACCTTGCAAGCACATCTCTGACCCACCCCATGCTGGAGCCTCTTTCTTGGACTCCAGTAAGTaGTCCGACGGCTGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: VPGPCKHISDPPHAGASFLDSSK*SDGCCG
Trigger: ACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAA...GAAAGAGGCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAAGGTCCAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CTTTCCTCAGGTGAGTCCAGCAGGGAGAGTTCTGTGTGGCCACTGGGAGGCAGCGCAGTCCCTGGACCTTaGAAGCACATCTCTGACCCA +
Preference number: 4 (lower is better)
Translates to: LSSGESSRESSVWPLGGSAVPGP*KHISDP
Trigger: TGGGTCAGAGATGTGCTTGCAAGGTCCAGGGACTGC...GCTGCCTCCCAGTGGCCACACAGAACTCTCCCTGCTGGACTCACCTGAGGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCCTGGGCCACGAGGTTaGATCAAGGAACATGGGCCT +
Preference number: 4 (lower is better)
Translates to: PGAFKTFICLWQGQHLGQPGPRG*IKEHGP
Trigger: AGGCCCATGTTCCTTGATGCAACCTCGTGGCCCAGG...CTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCGCCCGAAGCTGGGCCTaGGTCATTTTGTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: RELSRHSSACGKVSTWASARSWA*VILSTE
Trigger: CTCTGTGGACAAAATGACCCAGGCCCAGCTTCGGGC...GCTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CTTTCCTCAGGTGAGTCCAGCAGGGAGAGTTCTGTGTGGCCACTGGGAGGCAGCATGGTCCGTAGTGCCTaGGTCCATGAAACCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LSSGESSRESSVWPLGGSMVRSA*VHETLC
Trigger: GCAGAGGGTTTCATGGACCCAGGCACTACGGACCAT...GCTGCCTCCCAGTGGCCACACAGAACTCTCCCTGCTGGACTCACCTGAGGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCCGAGGAGCATCTCAGCTGGCAGACCACGCAGTCCCTGGACCTTGCAAGCACACTTGCGTCGTCTGGATaGTCATCTCACCTCCCTGTA +
Preference number: 4 (lower is better)
Translates to: PEEHLSWQTTQSLDLASTLASSG*SSHLPV
Trigger: TACAGGGAGGTGAGATGACCATCCAGACGACGCAAG...TGTGCTTGCAAGGTCCAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACTGGCCTCAGCCAGGGTaGCGACAGCATGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYWPQPG*RQHGRQ
Trigger: CTGCCGCCCATGCTGTCGCCACCCTGGCTGAGGCCA...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGGGTGAATTATTGTGGCCTCAGCCAGGGTaGCGACAGCATGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: GDCVWPRTLPPTKLGELLWPQPG*RQHGRQ
Trigger: CTGCCGCCCATGCTGTCGCCACCCTGGCTGAGGCCA...CAATAATTCACCCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp AACACCTCTGAGGAGGCAAGCTGCTCCCGGCCTGGGCCACGAGGTTGCATCAAGCTGGTCACCACAGTCTaGTACATGCTCACAGGGATC +
Preference number: 4 (lower is better)
Translates to: NTSEEASCSRPGPRGCIKLVTTV*YMLTGI
Trigger: GATCCCTGTGAGCATGTACCAGACTGTGGTGACCAG...CTTGATGCAACCTCGTGGCCCAGGCCGGGAGCAGCTTGCCTCCTCAGAGGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGTGAAGGGCATGGTCACCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCACCACCTCCACAGCTTaGCCGTCCATGGTGACTGCG +
Preference number: 4 (lower is better)
Translates to: GEGHGHLRLSLSVAQRMTTTSTA*PSMVTA
Trigger: CGCAGTCACCATGGACGGCCAAGCTGTGGAGGTGGT...GGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTGACCATGCCCTTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGTGTCCCTTCTTCCCTTCCGCGTACTGACCGGGCCCAACCAAGCTTAGCTTCCGTTCTGTGTGGCCACTaGGAGGCAGCTTTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: GVPSSLPRTDRAQPSLASVLCGH*EAALVK
Trigger: CTTCACCAAAGCTGCCTCCCAGTGGCCACACAGAAC...GGAAGCTAAGCTTGGTTGGGCCCGGTCAGTACGCGGAAGGGAAGAAGGGACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CTTTCCTCAGGTGAGTCCAGCAGGGAGAGTTCTGTGTGGCCACTGGGAGGCAGCGTTCTGTGTGGCCACTaGGAGGCAGCTTTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: LSSGESSRESSVWPLGGSVLCGH*EAALVK
Trigger: CTTCACCAAAGCTGCCTCCCAGTGGCCACACAGAAC...GCTGCCTCCCAGTGGCCACACAGAACTCTCCCTGCTGGACTCACCTGAGGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp AACACCTCTGAGGAGGCAAGCTGCTCCCGGCCTGGGCCACGAGGTTGCATCAAGTTGCATCAAGGAACATaGGCCTCCAGGAGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: NTSEEASCSRPGPRGCIKLHQGT*ASRSPF
Trigger: GAAGGGACTCCTGGAGGCCCATGTTCCTTGATGCAA...CTTGATGCAACCTCGTGGCCCAGGCCGGGAGCAGCTTGCCTCCTCAGAGGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp GGTGAAGGGCATGGTCACCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCCCTGCAGCTGCCAGATaGGCTGTCACCTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: GEGHGHLRLSLSVAQRMTPAAAR*AVTSSA
Trigger: AGCTGATGAGGTGACAGCTCATCTGGCAGCTGCAGG...GGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTGACCATGCCCTTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGAATTCCGTCGATGGTaGGAGGCGGCAGTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: PGSFQDIHLPVARSAPGPEFRRW*EAAVLS
Trigger: ACTCAGAACTGCCGCCTCTCACCATCGACGGAATTC...TGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCTCACTTGGGCAACGGTaGCCGTGGTTGGCAATTCTG +
Preference number: 4 (lower is better)
Translates to: RELSRHSSACGKVSTWASSLGQR*PWLAIL
Trigger: CAGAATTGCCAACCACGGTCACCGTTGCCCAAGTGA...GCTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp ACGGTTACCAAGAACACCCAGATAGTCAACACCTCTGAGGAGGCAAGCTGCTCCCGCCTGGGTGGCCTCTaGTGCTTGCGTCGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: TVTKNTQIVNTSEEASCSRLGGL*CLRRLD
Trigger: ATCCAGACGACGCAAGCATCAGAGGCCACCCAGGCG...GGAGCAGCTTGCCTCCTCAGAGGTGTTGACTATCTGGGTGTTCTTGGTAACCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp GGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGGGTGAATTATTGCCCTGCTGCATCTCCTaGGAAGCTGCCACTGCGGCC +
Preference number: 4 (lower is better)
Translates to: GDCVWPRTLPPTKLGELLPCCIS*EAATAA
Trigger: GGCCGCAGTGGCAGCTTCTCAGGAGATGCAGCAGGG...CAATAATTCACCCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp GGTGAAGGGCATGGTCACCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCCTTGGCCGTCCATGGTaGCTGCGCTGTCTGATATCC +
Preference number: 4 (lower is better)
Translates to: GEGHGHLRLSLSVAQRMTLGRPW*LRCLIS
Trigger: GGATATCAGACAGCGCAGTCACCATGGACGGCCAAG...GGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTGACCATGCCCTTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp GCTTCCAAGATCACACAAGATCAGGGGCGTTCAGGGTGCTGTGGCCACAGACCATTGCAAGCACATCTCTaGCCCACCCCATGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: ASKITQDQGRSGCCGHRPLQAHL*PTPCWS
Trigger: GCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAA...TGGTCTGTGGCCACAGCACCCTGAACGCCCCTGATCTTGTGTGATCTTGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GGTGTCCCTTCTTCCCTTCCGCGTACTGACCGGGCCCAACCAAGCTTAGCTTCCCACTTGCTGGGCCACTaGATGTGCTTCTATGGTAGC +
Preference number: 4 (lower is better)
Translates to: GVPSSLPRTDRAQPSLASHLLGH*MCFYGS
Trigger: GCTACCATAGAAGCACATGCAGTGGCCCAGCAAGTG...GGAAGCTAAGCTTGGTTGGGCCCGGTCAGTACGCGGAAGGGAAGAAGGGACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GGGAGGAGGGAGGAGGAGCTGTCCCTGTACTCAAGGTTCAGAGATTTGGCCTGTGTAGCCACATGGACCTaGTGCACTTGCTGGGCCACT +
Preference number: 4 (lower is better)
Translates to: GRREEELSLYSRFRDLACVATWT*CTCWAT
Trigger: AGTGGCCCAGCAAGTGCAGCAGGTCCATGTGGCTAC...ACAGGCCAAATCTCTGAACCTTGAGTACAGGGACAGCTCCTCCTCCCTCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCATTCCCACAGGACCTaGAGCTGCCAGATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: PGAFKTFICLWQGQHLGQHSHRT*SCQMSC
Trigger: ACAGCTCATCTGGCAGCTGCAGGTCCTGTGGGAATG...CTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GCTTCCAAGATCACACAAGATCAGGGGCGTTCAGGGTGCTGTGGCCACAGACCACCGTTTCTTTCCTGTTaGCACAGCAGCAGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: ASKITQDQGRSGCCGHRPPFLSC*HSSSSG
Trigger: GCCGCTGCTGCTGCTGTGGCAACAGGAAAGAAACGG...TGGTCTGTGGCCACAGCACCCTGAACGCCCCTGATCTTGTGTGATCTTGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACCGCAGGGGCGTGTTCTaGCAGAGCAGACTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: DPGMNKNWVTVSGHVPYHRRGVF*QSRLQV
Trigger: GACCTGGAGTCTGCTCTGGCAGAACACGCCCCTGCG...GTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCACATCTCTGGGATAAATaGCCGAAGCTGGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: PGSFQDIHLPVARSAPGPHLWDK*PKLGLG
Trigger: ACCCAGGCCCAGCTTCGGGCATTTATCCCAGAGATG...TGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCCGAGGAGCATCTCAGCTGGCAGACCACGCAGTCCCTGGACCTTGCAAGCACAGCTTTTGCTCTTCTGTaGGGACATCACTCCGGACAT +
Preference number: 4 (lower is better)
Translates to: PEEHLSWQTTQSLDLASTAFALL*GHHSGH
Trigger: ATGTCCGGAGTGATGTCCGCACAGAAGAGCAAAAGC...TGTGCTTGCAAGGTCCAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCGTGGCCTCTGATGCTTaGGTCGTCTGGATGGTCATC +
Preference number: 4 (lower is better)
Translates to: RELSRHSSACGKVSTWASVASDA*VVWMVI
Trigger: GATGACCATCCAGACGACGCAAGCATCAGAGGCCAC...GCTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GGGAGGAGGGAGGAGGAGCTGTCCCTGTACTCAAGGTTCAGAGATTTGGCCTGTAAGTGCTCCGACGGCTaGTGCGGTTTCCCCAGACAA +
Preference number: 4 (lower is better)
Translates to: GRREEELSLYSRFRDLACKCSDG*CGFPRQ
Trigger: TTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCACTT...ACAGGCCAAATCTCTGAACCTTGAGTACAGGGACAGCTCCTCCTCCCTCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GGTGTCCCTTCTTCCCTTCCGCGTACTGACCGGGCCCAACCAAGCTTAGCTTCCCCACAGTCTGGTACATaGTCACAGGGATCTGGACCA +
Preference number: 4 (lower is better)
Translates to: GVPSSLPRTDRAQPSLASPQSGT*SQGSGP
Trigger: TGGTCCAGATCCCTGTGAGCATGTACCAGACTGTGG...GGAAGCTAAGCTTGGTTGGGCCCGGTCAGTACGCGGAAGGGAAGAAGGGACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGGGTGAATTATTGCCTGCACTGGTCCGTTaGCCTGGGCGAGGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: GDCVWPRTLPPTKLGELLPALVR*PGRGWS
Trigger: TGACCAGCCTCGCCCAGGGCAACGGACCAGTGCAGG...CAATAATTCACCCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCGCAGTCCCTGGACCTTaGAAGCACATCTCTGACCCA +
Preference number: 4 (lower is better)
Translates to: RELSRHSSACGKVSTWASAVPGP*KHISDP
Trigger: TGGGTCAGAGATGTGCTTGCAAGGTCCAGGGACTGC...GCTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GCCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCGCGACCTGCACGATCTaGCATAAAGAGGCCATTAGC +
Preference number: 4 (lower is better)
Translates to: ARELSRHSSACGKVSTWAATCTI*HKEAIS
Trigger: GCTAATGGCCTCTTTATGGCAGATCGTGCAGGTCGC...GGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311967.6
ENST00000353868.5
CDS-3UTR GCA 90 bp CCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCACAGTCAGGATCCACTTaGGACCTGCACGATCTGCCA +
Preference number: 4 (lower is better)
Translates to: PGSFQDIHLPVARSAPGPQSGST*DLHDLP
Trigger: TGGCAGATCGTGCAGGTCGCAAGTGGATCCTGACTG...TGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311967.6
ENST00000353868.5
CDS-3UTR CCA 90 bp GTCCCTGGACCTTGCAAGCACATCTCTGACCCACCCCATGCTGGAGCCTCTTTCACCTGCTGCACTTGCTaGGCCACTGCATGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: VPGPCKHISDPPHAGASFTCCTC*ATACAS
Trigger: AGAAGCACATGCAGTGGCCCAGCAAGTGCAGCAGGT...GAAAGAGGCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAAGGTCCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAACCTGCTGCACTTGCTaGGCCACTGCATGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PGSFQDIHLPVARSAPGPTCCTC*ATACAS
Trigger: AGAAGCACATGCAGTGGCCCAGCAAGTGCAGCAGGT...TGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGTGTCCCTTCTTCCCTTCCGCGTACTGACCGGGCCCAACCAAGCTTAGCTTCCCTTCAGGCCACCAGATaGGCTTGCAGCTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: GVPSSLPRTDRAQPSLASLQATR*ACSFLS
Trigger: GGAAAGAAAGCTGCAAGCCCATCTGGTGGCCTGAAG...GGAAGCTAAGCTTGGTTGGGCCCGGTCAGTACGCGGAAGGGAAGAAGGGACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGATGGTCCGTAGTGCCTaGGTCCATGAAACCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PGAFKTFICLWQGQHLGQMVRSA*VHETLC
Trigger: GCAGAGGGTTTCATGGACCCAGGCACTACGGACCAT...CTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GTCCCTGGACCTTGCAAGCACATCTCTGACCCACCCCATGCTGGAGCCTCTTTCATGGTCCGTAGTGCCTaGGTCCATGAAACCCTCTGC +
Preference number: 4 (lower is better)
Translates to: VPGPCKHISDPPHAGASFMVRSA*VHETLC
Trigger: GCAGAGGGTTTCATGGACCCAGGCACTACGGACCAT...GAAAGAGGCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAAGGTCCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CTTTCCTCAGGTGAGTCCAGCAGGGAGAGTTCTGTGTGGCCACTGGGAGGCAGCAAGCATCAGCCAATGTaGCTACTGTTGCCCCCGTAC +
Preference number: 4 (lower is better)
Translates to: LSSGESSRESSVWPLGGSKHQPM*LLLPPY
Trigger: GTACGGGGGCAACAGTAGCCACATTGGCTGATGCTT...GCTGCCTCCCAGTGGCCACACAGAACTCTCCCTGCTGGACTCACCTGAGGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGATGCTTGCGTCGTCTaGATGGTCATCTCACCTCCC +
Preference number: 4 (lower is better)
Translates to: PGSFQDIHLPVARSAPGPDACVV*MVISPP
Trigger: GGGAGGTGAGATGACCATCCAGACGACGCAAGCATC...TGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp ACCCTCAGCTGTTTTCTATGGCCAGGTGTCCCTTCTTCCCTTCCGCGTACTGACAACGATGCCACCGCCTaGGTGGCCTCTGATGCTTGC +
Preference number: 4 (lower is better)
Translates to: TLSCFLWPGVPSSLPRTDNDATA*VASDAC
Trigger: GCAAGCATCAGAGGCCACCCAGGCGGTGGCATCGTT...GTCAGTACGCGGAAGGGAAGAAGGGACACCTGGCCATAGAAAACAGCTGAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACTGGCCTCAGCCAGGGTaGCGACAGCATGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: PPPEFVSSSTHDPGMNKNWPQPG*RQHGRQ
Trigger: CTGCCGCCCATGCTGTCGCCACCCTGGCTGAGGCCA...GTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GCCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCCTGGTCACCACAGTCTaGTACATGCTCACAGGGATC +
Preference number: 4 (lower is better)
Translates to: ARELSRHSSACGKVSTWALVTTV*YMLTGI
Trigger: GATCCCTGTGAGCATGTACCAGACTGTGGTGACCAG...GGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCATGTCTGATATCCTGGTaGTCACAGGGGCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: PGSFQDIHLPVARSAPGPCLISW*SQGPWP
Trigger: TGGCCATGGCCCCTGTGACCACCAGGATATCAGACA...TGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGGAGGAGGGAGGAGGAGCTGTCCCTGTACTCAAGGTTCAGAGATTTGGCCTGTCGCTGTCTGATATCCTaGTGGTCACAGGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: GRREEELSLYSRFRDLACRCLIS*WSQGPW
Trigger: CCATGGCCCCTGTGACCACCAGGATATCAGACAGCG...ACAGGCCAAATCTCTGAACCTTGAGTACAGGGACAGCTCCTCCTCCCTCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGGTTCTGTGTGGCCACTaGGAGGCAGCTTTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: PGAFKTFICLWQGQHLGQVLCGH*EAALVK
Trigger: CTTCACCAAAGCTGCCTCCCAGTGGCCACACAGAAC...CTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GTCCCTGGACCTTGCAAGCACATCTCTGACCCACCCCATGCTGGAGCCTCTTTCAGACCACGCAGTCCCTaGACCTTGCAAGCACATCTC +
Preference number: 4 (lower is better)
Translates to: VPGPCKHISDPPHAGASFRPRSP*TLQAHL
Trigger: GAGATGTGCTTGCAAGGTCCAGGGACTGCGTGGTCT...GAAAGAGGCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAAGGTCCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCAGACCACGCAGTCCCTaGACCTTGCAAGCACATCTC +
Preference number: 4 (lower is better)
Translates to: RELSRHSSACGKVSTWASRPRSP*TLQAHL
Trigger: GAGATGTGCTTGCAAGGTCCAGGGACTGCGTGGTCT...GCTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAACATTCATCTGCCTGTaGCAAGGTCAGCACCTGGGC +
Preference number: 4 (lower is better)
Translates to: PGSFQDIHLPVARSAPGPTFICL*QGQHLG
Trigger: GCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGT...TGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GTCCCTGGACCTTGCAAGCACATCTCTGACCCACCCCATGCTGGAGCCTCTTTCACATTCATCTGCCTGTaGCAAGGTCAGCACCTGGGC +
Preference number: 4 (lower is better)
Translates to: VPGPCKHISDPPHAGASFTFICL*QGQHLG
Trigger: GCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGT...GAAAGAGGCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAAGGTCCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGGAGGAGGGAGGAGGAGCTGTCCCTGTACTCAAGGTTCAGAGATTTGGCCTGTGCGTTCAGGGTGCTGTaGCCACAGACCAGATGTCTC +
Preference number: 4 (lower is better)
Translates to: GRREEELSLYSRFRDLACAFRVL*PQTRCL
Trigger: GAGACATCTGGTCTGTGGCCACAGCACCCTGAACGC...ACAGGCCAAATCTCTGAACCTTGAGTACAGGGACAGCTCCTCCTCCCTCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGTGAAGGGCATGGTCACCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCACACCATCACACACATaGGGAGAGCTGGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: GEGHGHLRLSLSVAQRMTTPSHT*GELGGG
Trigger: CCCTCCTCCCAGCTCTCCCCATGTGTGTGATGGTGT...GGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTGACCATGCCCTTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp ACCCTCAGCTGTTTTCTATGGCCAGGTGTCCCTTCTTCCCTTCCGCGTACTGACCCTGCAGCTGCCAGATaGGCTGTCACCTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: TLSCFLWPGVPSSLPRTDPAAAR*AVTSSA
Trigger: AGCTGATGAGGTGACAGCTCATCTGGCAGCTGCAGG...GTCAGTACGCGGAAGGGAAGAAGGGACACCTGGCCATAGAAAACAGCTGAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACCCAGAGAGGCGGCAGTTCTaGGTTAACCTCCTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: PGMNKNWVTVSGHVPYHPERRQF*VNLLWR
Trigger: GCGCCACAGGAGGTTAACTCAGAACTGCCGCCTCTC...TGGGTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp GGTGAAGGGCATGGTCACCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCGAATTCCGTCGATGGTaGGAGGCGGCAGTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: GEGHGHLRLSLSVAQRMTEFRRW*EAAVLS
Trigger: ACTCAGAACTGCCGCCTCTCACCATCGACGGAATTC...GGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTGACCATGCCCTTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp GCCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCACCAACCTGGATAAGTaGGACAGTGCCATCAGGGTT +
Preference number: 4 (lower is better)
Translates to: ARELSRHSSACGKVSTWATNLDK*DSAIRV
Trigger: AACCCTGATGGCACTGTCTCACTTATCCAGGTTGGT...GGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CTTTCCTCAGGTGAGTCCAGCAGGGAGAGTTCTGTGTGGCCACTGGGAGGCAGCACCAACCTGGATAAGTaGGACAGTGCCATCAGGGTT +
Preference number: 4 (lower is better)
Translates to: LSSGESSRESSVWPLGGSTNLDK*DSAIRV
Trigger: AACCCTGATGGCACTGTCTCACTTATCCAGGTTGGT...GCTGCCTCCCAGTGGCCACACAGAACTCTCCCTGCTGGACTCACCTGAGGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCACGTGGTTGGCAATTCTaGAGCATCAGCCAATGTGGC +
Preference number: 4 (lower is better)
Translates to: PGSFQDIHLPVARSAPGPRGWQF*SISQCG
Trigger: GCCACATTGGCTGATGCTTCAGAATTGCCAACCACG...TGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCGTGGTTGGCAATTCTaGAGCATCAGCCAATGTGGC +
Preference number: 4 (lower is better)
Translates to: PGAFKTFICLWQGQHLGQRGWQF*SISQCG
Trigger: GCCACATTGGCTGATGCTTCAGAATTGCCAACCACG...CTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp GGTGAAGGGCATGGTCACCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCTCACTTGGGCAACGGTaGCCGTGGTTGGCAATTCTG +
Preference number: 4 (lower is better)
Translates to: GEGHGHLRLSLSVAQRMTSLGQR*PWLAIL
Trigger: CAGAATTGCCAACCACGGTCACCGTTGCCCAAGTGA...GGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTGACCATGCCCTTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCGCCTGGGTGGCCTCTaGTGCTTGCGTCGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYRLGGL*CLRRLD
Trigger: ATCCAGACGACGCAAGCATCAGAGGCCACCCAGGCG...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp GGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGGGTGAATTATTGCGCCTGGGTGGCCTCTaGTGCTTGCGTCGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: GDCVWPRTLPPTKLGELLRLGGL*CLRRLD
Trigger: ATCCAGACGACGCAAGCATCAGAGGCCACCCAGGCG...CAATAATTCACCCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACCCCTGCTGCATCTCCTaGGAAGCTGCCACTGCGGCC +
Preference number: 4 (lower is better)
Translates to: PPPEFVSSSTHDPGMNKNPCCIS*EAATAA
Trigger: GGCCGCAGTGGCAGCTTCTCAGGAGATGCAGCAGGG...GTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp ACCCTCAGCTGTTTTCTATGGCCAGGTGTCCCTTCTTCCCTTCCGCGTACTGACTTGCAAGCACATCTCTaGCCCACCCCATGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TLSCFLWPGVPSSLPRTDLQAHL*PTPCWS
Trigger: GCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAA...GTCAGTACGCGGAAGGGAAGAAGGGACACCTGGCCATAGAAAACAGCTGAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GGTGAAGGGCATGGTCACCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCCATTCCCACAGGACCTaGAGCTGCCAGATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GEGHGHLRLSLSVAQRMTHSHRT*SCQMSC
Trigger: ACAGCTCATCTGGCAGCTGCAGGTCCTGTGGGAATG...GGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTGACCATGCCCTTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCCGAGGAGCATCTCAGCTGGCAGACCACGCAGTCCCTGGACCTTGCAAGCACACAGAGGACAATAGCTTaGTGTCCCACACGAGTAGTA +
Preference number: 4 (lower is better)
Translates to: PEEHLSWQTTQSLDLASTQRTIA*CPTRVV
Trigger: TACTACTCGTGTGGGACAGCAAGCTATTGTCCTCTG...TGTGCTTGCAAGGTCCAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCTCTGCCAACGATaGCACCGCCTGGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: VSSSTHDPGMNKNWVTVSGLCQR*HRLGGL
Trigger: GAGGCCACCCAGGCGGTGGCATCGTTGGCAGAGGCC...AGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACCTGAGAAGCTGCCACTaGGGCCTCTGCCAACGATGC +
Preference number: 4 (lower is better)
Translates to: DPGMNKNWVTVSGHVPYHLRSCH*GLCQRC
Trigger: GCATCGTTGGCAGAGGCCGCAGTGGCAGCTTCTCAG...GTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp ACCCTCAGCTGTTTTCTATGGCCAGGTGTCCCTTCTTCCCTTCCGCGTACTGACAAGTGCTCCGACGGCTaGTGCGGTTTCCCCAGACAA +
Preference number: 4 (lower is better)
Translates to: TLSCFLWPGVPSSLPRTDKCSDG*CGFPRQ
Trigger: TTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCACTT...GTCAGTACGCGGAAGGGAAGAAGGGACACCTGGCCATAGAAAACAGCTGAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp ACCCTCAGCTGTTTTCTATGGCCAGGTGTCCCTTCTTCCCTTCCGCGTACTGACTTGGACTCCAGTAAGTaGTCCGACGGCTGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: TLSCFLWPGVPSSLPRTDLDSSK*SDGCCG
Trigger: ACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAA...GTCAGTACGCGGAAGGGAAGAAGGGACACCTGGCCATAGAAAACAGCTGAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCACCACAGTCTGGTACATaGTCACAGGGATCTGGACCA +
Preference number: 4 (lower is better)
Translates to: PGSFQDIHLPVARSAPGPPQSGT*SQGSGP
Trigger: TGGTCCAGATCCCTGTGAGCATGTACCAGACTGTGG...TGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCCACAGTCTGGTACATaGTCACAGGGATCTGGACCA +
Preference number: 4 (lower is better)
Translates to: PGAFKTFICLWQGQHLGQPQSGT*SQGSGP
Trigger: TGGTCCAGATCCCTGTGAGCATGTACCAGACTGTGG...CTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGGGCCATGGCCACCTaGACTGGTCCGTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: VSSSTHDPGMNKNWVTVSGAMAT*TGPLPW
Trigger: CCAGGGCAACGGACCAGTGCAGGTGGCCATGGCCCC...AGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCCGAGGAGCATCTCAGCTGGCAGACCACGCAGTCCCTGGACCTTGCAAGCACATTCAAGACATTCATCTaGCTGTGGCAAGGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: PEEHLSWQTTQSLDLASTFKTFI*LWQGQH
Trigger: GTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAA...TGTGCTTGCAAGGTCCAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GTCCCTGGACCTTGCAAGCACATCTCTGACCCACCCCATGCTGGAGCCTCTTTCGCCATATGTTCGGTTTaGGTCACTCCGTGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: VPGPCKHISDPPHAGASFAICSV*VTPCSS
Trigger: GGAGGAACACGGAGTGACCCAAACCGAACATATGGC...GAAAGAGGCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAAGGTCCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGGCCATATGTTCGGTTTaGGTCACTCCGTGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: PGAFKTFICLWQGQHLGQAICSV*VTPCSS
Trigger: GGAGGAACACGGAGTGACCCAAACCGAACATATGGC...CTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCCATATGTTCGGTTTaGGTCACTCCGTGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: PGSFQDIHLPVARSAPGPAICSV*VTPCSS
Trigger: GGAGGAACACGGAGTGACCCAAACCGAACATATGGC...TGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGTGAAGGGCATGGTCACCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCACCTGCTGCACTTGCTaGGCCACTGCATGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GEGHGHLRLSLSVAQRMTTCCTC*ATACAS
Trigger: AGAAGCACATGCAGTGGCCCAGCAAGTGCAGCAGGT...GGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTGACCATGCCCTTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GCCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCATAAATGCCCGAAGCTaGGCCTGGGTCATTTTGTCC +
Preference number: 4 (lower is better)
Translates to: ARELSRHSSACGKVSTWAINARS*AWVILS
Trigger: GGACAAAATGACCCAGGCCCAGCTTCGGGCATTTAT...GGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCCTTCAGGCCACCAGATaGGCTTGCAGCTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: RELSRHSSACGKVSTWASLQATR*ACSFLS
Trigger: GGAAAGAAAGCTGCAAGCCCATCTGGTGGCCTGAAG...GCTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GTCCCTGGACCTTGCAAGCACATCTCTGACCCACCCCATGCTGGAGCCTCTTTCCTTCAGGCCACCAGATaGGCTTGCAGCTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: VPGPCKHISDPPHAGASFLQATR*ACSFLS
Trigger: GGAAAGAAAGCTGCAAGCCCATCTGGTGGCCTGAAG...GAAAGAGGCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAAGGTCCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGTGTCCCTTCTTCCCTTCCGCGTACTGACCGGGCCCAACCAAGCTTAGCTTCCGAGCTATACTATGTGTaGCTGTGGCCTGTGTTTGCG +
Preference number: 4 (lower is better)
Translates to: GVPSSLPRTDRAQPSLASELYYV*LWPVFA
Trigger: CGCAAACACAGGCCACAGCCACACATAGTATAGCTC...GGAAGCTAAGCTTGGTTGGGCCCGGTCAGTACGCGGAAGGGAAGAAGGGACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAAAGCATCAGCCAATGTaGCTACTGTTGCCCCCGTAC +
Preference number: 4 (lower is better)
Translates to: PGSFQDIHLPVARSAPGPKHQPM*LLLPPY
Trigger: GTACGGGGGCAACAGTAGCCACATTGGCTGATGCTT...TGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp ACGGTTACCAAGAACACCCAGATAGTCAACACCTCTGAGGAGGCAAGCTGCTCCAGGGTGGCGACAGCATaGGCGGCAGCTTCGCTGTTA +
Preference number: 4 (lower is better)
Translates to: TVTKNTQIVNTSEEASCSRVATA*AAASLL
Trigger: TAACAGCGAAGCTGCCGCCCATGCTGTCGCCACCCT...GGAGCAGCTTGCCTCCTCAGAGGTGTTGACTATCTGGGTGTTCTTGGTAACCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCCCCACCTTGTAAGGTaGCCTCAGCCAGGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYPHLVR*PQPGWR
Trigger: TCGCCACCCTGGCTGAGGCCACCTTACAAGGTGGGG...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGGAGGAGGGAGGAGGAGCTGTCCCTGTACTCAAGGTTCAGAGATTTGGCCTGTAGGGAGAGTTCTGTGTaGCCACTGGGAGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: GRREEELSLYSRFRDLACRESSV*PLGGSF
Trigger: AAAGCTGCCTCCCAGTGGCCACACAGAACTCTCCCT...ACAGGCCAAATCTCTGAACCTTGAGTACAGGGACAGCTCCTCCTCCCTCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACAAGCTGCTCCCGGCCTaGGCCACGAGGTTGCATCAA +
Preference number: 4 (lower is better)
Translates to: DPGMNKNWVTVSGHVPYHKLLPA*ATRLHQ
Trigger: TTGATGCAACCTCGTGGCCCAGGCCGGGAGCAGCTT...GTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CCCGAGGAGCATCTCAGCTGGCAGACCACGCAGTCCCTGGACCTTGCAAGCACAGGAGTTGAGTATATCTaGGTCATCGTAAGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: PEEHLSWQTTQSLDLASTGVEYI*VIVRGV
Trigger: GACACCTCTTACGATGACTCAGATATACTCAACTCC...TGTGCTTGCAAGGTCCAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACCCACCTGCAGCTGCCAGATaGGCTGTCACCTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: PGMNKNWVTVSGHVPYHPPAAAR*AVTSSA
Trigger: AGCTGATGAGGTGACAGCTCATCTGGCAGCTGCAGG...TGGGTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CCCGAGGAGCATCTCAGCTGGCAGACCACGCAGTCCCTGGACCTTGCAAGCACACTGGACTACAGTCTGTaGTGGTACAAGATGAGCTAT +
Preference number: 4 (lower is better)
Translates to: PEEHLSWQTTQSLDLASTLDYSL*WYKMSY
Trigger: ATAGCTCATCTTGTACCATCACAGACTGTAGTCCAG...TGTGCTTGCAAGGTCCAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp GGTGAAGGGCATGGTCACCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCCGTGGTTGGCAATTCTaGAGCATCAGCCAATGTGGC +
Preference number: 4 (lower is better)
Translates to: GEGHGHLRLSLSVAQRMTRGWQF*SISQCG
Trigger: GCCACATTGGCTGATGCTTCAGAATTGCCAACCACG...GGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTGACCATGCCCTTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp GACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACCTTGGCCGTCCATGGTaGCTGCGCTGTCTGATATCC +
Preference number: 4 (lower is better)
Translates to: DPGMNKNWVTVSGHVPYHLGRPW*LRCLIS
Trigger: GGATATCAGACAGCGCAGTCACCATGGACGGCCAAG...GTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACCCATTGCAAGCACATCTCTaGCCCACCCCATGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PGMNKNWVTVSGHVPYHPLQAHL*PTPCWS
Trigger: GCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAA...TGGGTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp ACGGTTACCAAGAACACCCAGATAGTCAACACCTCTGAGGAGGCAAGCTGCTCCGTAGCCACATGGACCTaGTGCACTTGCTGGGCCACT +
Preference number: 4 (lower is better)
Translates to: TVTKNTQIVNTSEEASCSVATWT*CTCWAT
Trigger: AGTGGCCCAGCAAGTGCAGCAGGTCCATGTGGCTAC...GGAGCAGCTTGCCTCCTCAGAGGTGTTGACTATCTGGGTGTTCTTGGTAACCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACCCACCGTTTCTTTCCTGTTaGCACAGCAGCAGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: PGMNKNWVTVSGHVPYHPPFLSC*HSSSSG
Trigger: GCCGCTGCTGCTGCTGTGGCAACAGGAAAGAAACGG...TGGGTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GCCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCGGTCTTCCAGGATCATaGTCTTGTACTTACGCACCA +
Preference number: 4 (lower is better)
Translates to: ARELSRHSSACGKVSTWAGLPGS*SCTYAP
Trigger: TGGTGCGTAAGTACAAGAGCATGATCCTGGAAGACC...GGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GTCCCTGGACCTTGCAAGCACATCTCTGACCCACCCCATGCTGGAGCCTCTTTCATCACTCCGGACATTTaGCCAGGGGATATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: VPGPCKHISDPPHAGASFITPDI*PGDIFR
Trigger: CCTGAAGATATCCCCTGGGCAAATGTCCGGAGTGAT...GAAAGAGGCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAAGGTCCAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGATCACTCCGGACATTTaGCCAGGGGATATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PGAFKTFICLWQGQHLGQITPDI*PGDIFR
Trigger: CCTGAAGATATCCCCTGGGCAAATGTCCGGAGTGAT...CTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GTCCCTGGACCTTGCAAGCACATCTCTGACCCACCCCATGCTGGAGCCTCTTTCGCTTTTGCTCTTCTGTaGGGACATCACTCCGGACAT +
Preference number: 4 (lower is better)
Translates to: VPGPCKHISDPPHAGASFAFALL*GHHSGH
Trigger: ATGTCCGGAGTGATGTCCGCACAGAAGAGCAAAAGC...GAAAGAGGCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAAGGTCCAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CTTTCCTCAGGTGAGTCCAGCAGGGAGAGTTCTGTGTGGCCACTGGGAGGCAGCTTCAAGACATTCATCTaGCTGTGGCAAGGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: LSSGESSRESSVWPLGGSFKTFI*LWQGQH
Trigger: GTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAA...GCTGCCTCCCAGTGGCCACACAGAACTCTCCCTGCTGGACTCACCTGAGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGGAGGAGGGAGGAGGAGCTGTCCCTGTACTCAAGGTTCAGAGATTTGGCCTGTGCCATATGTTCGGTTTaGGTCACTCCGTGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GRREEELSLYSRFRDLACAICSV*VTPCSS
Trigger: GGAGGAACACGGAGTGACCCAAACCGAACATATGGC...ACAGGCCAAATCTCTGAACCTTGAGTACAGGGACAGCTCCTCCTCCCTCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GCCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCTTTGTCCACAGAGACTaGAATTCCGTCGATGGTGAG +
Preference number: 4 (lower is better)
Translates to: ARELSRHSSACGKVSTWAFVHRD*NSVDGE
Trigger: CTCACCATCGACGGAATTCCAGTCTCTGTGGACAAA...GGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GTCCCTGGACCTTGCAAGCACATCTCTGACCCACCCCATGCTGGAGCCTCTTTCCACCTCCCTGTAACGTaGCCCAATTTTGTTCCACCT +
Preference number: 4 (lower is better)
Translates to: VPGPCKHISDPPHAGASFHLPVT*PNFVPP
Trigger: AGGTGGAACAAAATTGGGCCACGTTACAGGGAGGTG...GAAAGAGGCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAAGGTCCAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGTGAAGGGCATGGTCACCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCCTTGCGTCGTCTGGATaGTCATCTCACCTCCCTGTA +
Preference number: 4 (lower is better)
Translates to: GEGHGHLRLSLSVAQRMTLASSG*SSHLPV
Trigger: TACAGGGAGGTGAGATGACCATCCAGACGACGCAAG...GGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTGACCATGCCCTTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGGGTGAATTATTGAGGGTGGCGACAGCATaGGCGGCAGCTTCGCTGTTA +
Preference number: 4 (lower is better)
Translates to: GDCVWPRTLPPTKLGELLRVATA*AAASLL
Trigger: TAACAGCGAAGCTGCCGCCCATGCTGTCGCCACCCT...CAATAATTCACCCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACTGCCCTGGGCGAGGCTaGTCACCACAGTCTGGTACA +
Preference number: 4 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYCPGRG*SPQSGT
Trigger: TGTACCAGACTGTGGTGACCAGCCTCGCCCAGGGCA...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGGGTGAATTATTGTGCCCTGGGCGAGGCTaGTCACCACAGTCTGGTACA +
Preference number: 4 (lower is better)
Translates to: GDCVWPRTLPPTKLGELLCPGRG*SPQSGT
Trigger: TGTACCAGACTGTGGTGACCAGCCTCGCCCAGGGCA...CAATAATTCACCCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACACTGGTCCGTTGCCCTaGGCGAGGCTGGTCACCACA +
Preference number: 4 (lower is better)
Translates to: PPPEFVSSSTHDPGMNKNTGPLP*ARLVTT
Trigger: TGTGGTGACCAGCCTCGCCCAGGGCAACGGACCAGT...GTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GCTACTGGAGACTCAGGGCTTGCAGCTGAGAAAGACAGAGTTAACGGTTACCAAACTGGTCCGTTGCCCTaGGCGAGGCTGGTCACCACA +
Preference number: 4 (lower is better)
Translates to: ATGDSGLAAEKDRVNGYQTGPLP*ARLVTT
Trigger: TGTGGTGACCAGCCTCGCCCAGGGCAACGGACCAGT...TTGGTAACCGTTAACTCTGTCTTTCTCAGCTGCAAGCCCTGAGTCTCCAGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp AAGCACACTTACACGCACGCACTCCTCAAACCCCTAATACTTCGGTTACCTTCACATGGCCACCTGCACTaGTCCGTTGCCCTGGGCGAG +
Preference number: 4 (lower is better)
Translates to: KHTYTHALLKPLILRLPSHGHLH*SVALGE
Trigger: CTCGCCCAGGGCAACGGACCAGTGCAGGTGGCCATG...TGAAGGTAACCGAAGTATTAGGGGTTTGAGGAGTGCGTGCGTGTAAGTGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp ACCCTCAGCTGTTTTCTATGGCCAGGTGTCCCTTCTTCCCTTCCGCGTACTGACTGTCTGATATCCTGGTaGTCACAGGGGCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: TLSCFLWPGVPSSLPRTDCLISW*SQGPWP
Trigger: TGGCCATGGCCCCTGTGACCACCAGGATATCAGACA...GTCAGTACGCGGAAGGGAAGAAGGGACACCTGGCCATAGAAAACAGCTGAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGGGTGAATTATTGACCACCTCCACAGCTTaGCCGTCCATGGTGACTGCG +
Preference number: 4 (lower is better)
Translates to: GDCVWPRTLPPTKLGELLTTSTA*PSMVTA
Trigger: CGCAGTCACCATGGACGGCCAAGCTGTGGAGGTGGT...CAATAATTCACCCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCTGGGTGACTGTGTCTaGCCACGTACCCTACCACCC +
Preference number: 4 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYLGDCV*PRTLPP
Trigger: GGGTGGTAGGGTACGTGGCCAGACACAGTCACCCAG...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp ACCCTCAGCTGTTTTCTATGGCCAGGTGTCCCTTCTTCCCTTCCGCGTACTGACAGGGAGAGTTCTGTGTaGCCACTGGGAGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: TLSCFLWPGVPSSLPRTDRESSV*PLGGSF
Trigger: AAAGCTGCCTCCCAGTGGCCACACAGAACTCTCCCT...GTCAGTACGCGGAAGGGAAGAAGGGACACCTGGCCATAGAAAACAGCTGAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACGAGGAGCATCTCAGCTaGCAGACCACGCAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYEEHLS*QTTQSL
Trigger: CAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTC...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp GGTGTCCCTTCTTCCCTTCCGCGTACTGACCGGGCCCAACCAAGCTTAGCTTCCGGAGTTGAGTATATCTaGGTCATCGTAAGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: GVPSSLPRTDRAQPSLASGVEYI*VIVRGV
Trigger: GACACCTCTTACGATGACTCAGATATACTCAACTCC...GGAAGCTAAGCTTGGTTGGGCCCGGTCAGTACGCGGAAGGGAAGAAGGGACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp ACCCTCAGCTGTTTTCTATGGCCAGGTGTCCCTTCTTCCCTTCCGCGTACTGACCGTGGTTGGCAATTCTaGAGCATCAGCCAATGTGGC +
Preference number: 4 (lower is better)
Translates to: TLSCFLWPGVPSSLPRTDRGWQF*SISQCG
Trigger: GCCACATTGGCTGATGCTTCAGAATTGCCAACCACG...GTCAGTACGCGGAAGGGAAGAAGGGACACCTGGCCATAGAAAACAGCTGAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACCCATCACTTGGGCAACGGTaGCCGTGGTTGGCAATTCTG +
Preference number: 4 (lower is better)
Translates to: PGMNKNWVTVSGHVPYHPSLGQR*PWLAIL
Trigger: CAGAATTGCCAACCACGGTCACCGTTGCCCAAGTGA...TGGGTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp GGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGGGTGAATTATTGGGTGACTGCGCTGTCTaGTATCCTGGTGGTCACAGG +
Preference number: 4 (lower is better)
Translates to: GDCVWPRTLPPTKLGELLGDCAV*YPGGHR
Trigger: CCTGTGACCACCAGGATATCAGACAGCGCAGTCACC...CAATAATTCACCCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp GGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGGGTGAATTATTGCTTGGCCGTCCATGGTaGCTGCGCTGTCTGATATCC +
Preference number: 4 (lower is better)
Translates to: GDCVWPRTLPPTKLGELLLGRPW*LRCLIS
Trigger: GGATATCAGACAGCGCAGTCACCATGGACGGCCAAG...CAATAATTCACCCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACGCCACATGGACCTGCTaGACTTGCTGGGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: PPPEFVSSSTHDPGMNKNATWTC*TCWATA
Trigger: TGCAGTGGCCCAGCAAGTGCAGCAGGTCCATGTGGC...GTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACGTAGCCACATGGACCTaGTGCACTTGCTGGGCCACT +
Preference number: 4 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYVATWT*CTCWAT
Trigger: AGTGGCCCAGCAAGTGCAGCAGGTCCATGTGGCTAC...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGGGTGAATTATTGGTAGCCACATGGACCTaGTGCACTTGCTGGGCCACT +
Preference number: 4 (lower is better)
Translates to: GDCVWPRTLPPTKLGELLVATWT*CTCWAT
Trigger: AGTGGCCCAGCAAGTGCAGCAGGTCCATGTGGCTAC...CAATAATTCACCCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCACAGAGGACAATAGCTTaGTGTCCCACACGAGTAGTA +
Preference number: 4 (lower is better)
Translates to: PGSFQDIHLPVARSAPGPQRTIA*CPTRVV
Trigger: TACTACTCGTGTGGGACAGCAAGCTATTGTCCTCTG...TGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGGGTGAATTATTGGCCACCAGATGGGCTTaGAGCTTTCTTTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GDCVWPRTLPPTKLGELLATRWA*SFLSPS
Trigger: GCTGGGGGAAAGAAAGCTGCAAGCCCATCTGGTGGC...CAATAATTCACCCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCGAAACCCTCTGCTTTTaGTCTTCTGTGCGGACATCA +
Preference number: 4 (lower is better)
Translates to: RELSRHSSACGKVSTWASETLCF*SSVRTS
Trigger: TGATGTCCGCACAGAAGAGCAAAAGCAGAGGGTTTC...GCTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGAAACCCTCTGCTTTTaGTCTTCTGTGCGGACATCA +
Preference number: 4 (lower is better)
Translates to: PGSFQDIHLPVARSAPGPETLCF*SSVRTS
Trigger: TGATGTCCGCACAGAAGAGCAAAAGCAGAGGGTTTC...TGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACGTGGCCTCTGATGCTTaGGTCGTCTGGATGGTCATC +
Preference number: 4 (lower is better)
Translates to: DPGMNKNWVTVSGHVPYHVASDA*VVWMVI
Trigger: GATGACCATCCAGACGACGCAAGCATCAGAGGCCAC...GTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACTGCTCCGACGGCTGCTaGGGTTTCCCCAGACAAGAC +
Preference number: 4 (lower is better)
Translates to: PPPEFVSSSTHDPGMNKNCSDGC*GFPRQD
Trigger: GTCTTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCA...GTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACCCAACCTGCTGCACTTGCTaGGCCACTGCATGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PGMNKNWVTVSGHVPYHPTCCTC*ATACAS
Trigger: AGAAGCACATGCAGTGGCCCAGCAAGTGCAGCAGGT...TGGGTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCTTTGTCCACAGAGACTaGAATTCCGTCGATGGTGAG +
Preference number: 4 (lower is better)
Translates to: RELSRHSSACGKVSTWASFVHRD*NSVDGE
Trigger: CTCACCATCGACGGAATTCCAGTCTCTGTGGACAAA...GCTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGGGTGAATTATTGGCCCGAAGCTGGGCCTaGGTCATTTTGTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: GDCVWPRTLPPTKLGELLARSWA*VILSTE
Trigger: CTCTGTGGACAAAATGACCCAGGCCCAGCTTCGGGC...CAATAATTCACCCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGTGAAGGGCATGGTCACCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCATAAATGCCCGAAGCTaGGCCTGGGTCATTTTGTCC +
Preference number: 4 (lower is better)
Translates to: GEGHGHLRLSLSVAQRMTINARS*AWVILS
Trigger: GGACAAAATGACCCAGGCCCAGCTTCGGGCATTTAT...GGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTGACCATGCCCTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACATGGTCCGTAGTGCCTaGGTCCATGAAACCCTCTGC +
Preference number: 4 (lower is better)
Translates to: DPGMNKNWVTVSGHVPYHMVRSA*VHETLC
Trigger: GCAGAGGGTTTCATGGACCCAGGCACTACGGACCAT...GTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCTACTATGTGTGGCTGTaGCCTGTGTTTGCGTTTGCT +
Preference number: 4 (lower is better)
Translates to: RELSRHSSACGKVSTWASYYVWL*PVFAFA
Trigger: AGCAAACGCAAACACAGGCCACAGCCACACATAGTA...GCTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGTGAAGGGCATGGTCACCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCGAGCTATACTATGTGTaGCTGTGGCCTGTGTTTGCG +
Preference number: 4 (lower is better)
Translates to: GEGHGHLRLSLSVAQRMTELYYV*LWPVFA
Trigger: CGCAAACACAGGCCACAGCCACACATAGTATAGCTC...GGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTGACCATGCCCTTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp AACACCTCTGAGGAGGCAAGCTGCTCCCGGCCTGGGCCACGAGGTTGCATCAAGGGGTTACTAAAAGTCTaGACTACAGTCTGTGATGGT +
Preference number: 4 (lower is better)
Translates to: NTSEEASCSRPGPRGCIKGLLKV*TTVCDG
Trigger: ACCATCACAGACTGTAGTCCAGACTTTTAGTAACCC...CTTGATGCAACCTCGTGGCCCAGGCCGGGAGCAGCTTGCCTCCTCAGAGGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACGCCCCCGTACCAACCTaGATAAGTGAGACAGTGCCA +
Preference number: 4 (lower is better)
Translates to: DPGMNKNWVTVSGHVPYHAPVPT*ISETVP
Trigger: TGGCACTGTCTCACTTATCCAGGTTGGTACGGGGGC...GTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGGAGGAGGGAGGAGGAGCTGTCCCTGTACTCAAGGTTCAGAGATTTGGCCTGTCACCTCCCTGTAACGTaGCCCAATTTTGTTCCACCT +
Preference number: 4 (lower is better)
Translates to: GRREEELSLYSRFRDLACHLPVT*PNFVPP
Trigger: AGGTGGAACAAAATTGGGCCACGTTACAGGGAGGTG...ACAGGCCAAATCTCTGAACCTTGAGTACAGGGACAGCTCCTCCTCCCTCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp ACGGTTACCAAGAACACCCAGATAGTCAACACCTCTGAGGAGGCAAGCTGCTCCGATGCTTGCGTCGTCTaGATGGTCATCTCACCTCCC +
Preference number: 4 (lower is better)
Translates to: TVTKNTQIVNTSEEASCSDACVV*MVISPP
Trigger: GGGAGGTGAGATGACCATCCAGACGACGCAAGCATC...GGAGCAGCTTGCCTCCTCAGAGGTGTTGACTATCTGGGTGTTCTTGGTAACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGGAGGAGGGAGGAGGAGCTGTCCCTGTACTCAAGGTTCAGAGATTTGGCCTGTATGCTCACAGGGATCTaGACCAGGCCATTAGCATCT +
Preference number: 4 (lower is better)
Translates to: GRREEELSLYSRFRDLACMLTGI*TRPLAS
Trigger: AGATGCTAATGGCCTGGTCCAGATCCCTGTGAGCAT...ACAGGCCAAATCTCTGAACCTTGAGTACAGGGACAGCTCCTCCTCCCTCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACTGCCCTGGGCGAGGCTaGTCACCACAGTCTGGTACA +
Preference number: 4 (lower is better)
Translates to: PPPEFVSSSTHDPGMNKNCPGRG*SPQSGT
Trigger: TGTACCAGACTGTGGTGACCAGCCTCGCCCAGGGCA...GTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp AAGCACACTTACACGCACGCACTCCTCAAACCCCTAATACTTCGGTTACCTTCAACTGGTCCGTTGCCCTaGGCGAGGCTGGTCACCACA +
Preference number: 4 (lower is better)
Translates to: KHTYTHALLKPLILRLPSTGPLP*ARLVTT
Trigger: TGTGGTGACCAGCCTCGCCCAGGGCAACGGACCAGT...TGAAGGTAACCGAAGTATTAGGGGTTTGAGGAGTGCGTGCGTGTAAGTGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GCTACTGGAGACTCAGGGCTTGCAGCTGAGAAAGACAGAGTTAACGGTTACCAAACCACCTCCACAGCTTaGCCGTCCATGGTGACTGCG +
Preference number: 4 (lower is better)
Translates to: ATGDSGLAAEKDRVNGYQTTSTA*PSMVTA
Trigger: CGCAGTCACCATGGACGGCCAAGCTGTGGAGGTGGT...TTGGTAACCGTTAACTCTGTCTTTCTCAGCTGCAAGCCCTGAGTCTCCAGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACCCAAGGGAGAGTTCTGTGTaGCCACTGGGAGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: PGMNKNWVTVSGHVPYHPRESSV*PLGGSF
Trigger: AAAGCTGCCTCCCAGTGGCCACACAGAACTCTCCCT...TGGGTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACGAGGAGCATCTCAGCTaGCAGACCACGCAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: PPPEFVSSSTHDPGMNKNEEHLS*QTTQSL
Trigger: CAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTC...GTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACACATTCATCTGCCTGTaGCAAGGTCAGCACCTGGGC +
Preference number: 4 (lower is better)
Translates to: DPGMNKNWVTVSGHVPYHTFICL*QGQHLG
Trigger: GCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGT...GTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp ACGGTTACCAAGAACACCCAGATAGTCAACACCTCTGAGGAGGCAAGCTGCTCCTCTGGACCAGGCCTGTaGCTTTGTCAGTCAGGATCC +
Preference number: 4 (lower is better)
Translates to: TVTKNTQIVNTSEEASCSSGPGL*LCQSGS
Trigger: GGATCCTGACTGACAAAGCCACAGGCCTGGTCCAGA...GGAGCAGCTTGCCTCCTCAGAGGTGTTGACTATCTGGGTGTTCTTGGTAACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353868.5
CDS-3UTR CCA 90 bp GGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGGGTGAATTATTGACACCATCACACACATaGGGAGAGCTGGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: GDCVWPRTLPPTKLGELLTPSHT*GELGGG
Trigger: CCCTCCTCCCAGCTCTCCCCATGTGTGTGATGGTGT...CAATAATTCACCCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp GGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGGGTGAATTATTGCTCCGTGTTCCTCCATaGAGTTCTACTCAGAGCGGC +
Preference number: 4 (lower is better)
Translates to: GDCVWPRTLPPTKLGELLLRVPP*SSTQSG
Trigger: GCCGCTCTGAGTAGAACTTCATGGAGGAACACGGAG...CAATAATTCACCCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223190.8
ENST00000311967.6
CDS-3UTR TCA 90 bp CCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACCCTGCAGCTGCCAGATaGGCTGTCACCTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: PPPEFVSSSTHDPGMNKNPAAAR*AVTSSA
Trigger: AGCTGATGAGGTGACAGCTCATCTGGCAGCTGCAGG...GTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CCCGAGGAGCATCTCAGCTGGCAGACCACGCAGTCCCTGGACCTTGCAAGCACATTAGACTCAAATACATaGGGCCGTTTCCGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: PEEHLSWQTTQSLDLASTLDSNT*GRFRFF
Trigger: AAAGAAACGGAAACGGCCTCATGTATTTGAGTCTAA...TGTGCTTGCAAGGTCCAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp GTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGAGAGGCGGCAGTTCTaGGTTAACCTCCTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: VSSSTHDPGMNKNWVTVSERRQF*VNLLWR
Trigger: GCGCCACAGGAGGTTAACTCAGAACTGCCGCCTCTC...AGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCACTGGACTACAGTCTGTaGTGGTACAAGATGAGCTAT +
Preference number: 4 (lower is better)
Translates to: PGSFQDIHLPVARSAPGPLDYSL*WYKMSY
Trigger: ATAGCTCATCTTGTACCATCACAGACTGTAGTCCAG...TGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCCTGGACTACAGTCTGTaGTGGTACAAGATGAGCTAT +
Preference number: 4 (lower is better)
Translates to: RELSRHSSACGKVSTWASLDYSL*WYKMSY
Trigger: ATAGCTCATCTTGTACCATCACAGACTGTAGTCCAG...GCTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CTTTCCTCAGGTGAGTCCAGCAGGGAGAGTTCTGTGTGGCCACTGGGAGGCAGCTTCCACAGCGCACCTTaGTTTCATACAGATAATTCC +
Preference number: 4 (lower is better)
Translates to: LSSGESSRESSVWPLGGSFHSAP*FHTDNS
Trigger: GGAATTATCTGTATGAAATCAAGGTGCGCTGTGGAA...GCTGCCTCCCAGTGGCCACACAGAACTCTCCCTGCTGGACTCACCTGAGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACGATAGTCAACACCTCTaGGGAGGCAAGCTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: PPPEFVSSSTHDPGMNKNDSQHL*GGKLLP
Trigger: CGGGAGCAGCTTGCCTCCTCAGAGGTGTTGACTATC...GTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACCACTTGCTGGGCCACTaGATGTGCTTCTATGGTAGC +
Preference number: 4 (lower is better)
Translates to: DPGMNKNWVTVSGHVPYHHLLGH*MCFYGS
Trigger: GCTACCATAGAAGCACATGCAGTGGCCCAGCAAGTG...GTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GTCCCTGGACCTTGCAAGCACATCTCTGACCCACCCCATGCTGGAGCCTCTTTCAGCAAACGTGTTTGTTaGCTCTTCCGGATAGATGGA +
Preference number: 4 (lower is better)
Translates to: VPGPCKHISDPPHAGASFSKRVC*LFRIDG
Trigger: TCCATCTATCCGGAAGAGGCAACAAACACGTTTGCT...GAAAGAGGCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAAGGTCCAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAAGCAAACGTGTTTGTTaGCTCTTCCGGATAGATGGA +
Preference number: 4 (lower is better)
Translates to: PGSFQDIHLPVARSAPGPSKRVC*LFRIDG
Trigger: TCCATCTATCCGGAAGAGGCAACAAACACGTTTGCT...TGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GGTGAAGGGCATGGTCACCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCGGTCTTCCAGGATCATaGTCTTGTACTTACGCACCA +
Preference number: 4 (lower is better)
Translates to: GEGHGHLRLSLSVAQRMTGLPGS*SCTYAP
Trigger: TGGTGCGTAAGTACAAGAGCATGATCCTGGAAGACC...GGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTGACCATGCCCTTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGGGTGAATTATTGCATCTCTGGGATAAATaGCCGAAGCTGGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GDCVWPRTLPPTKLGELLHLWDK*PKLGLG
Trigger: ACCCAGGCCCAGCTTCGGGCATTTATCCCAGAGATG...CAATAATTCACCCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GCTACTGGAGACTCAGGGCTTGCAGCTGAGAAAGACAGAGTTAACGGTTACCAAGCCACCAGATGGGCTTaGAGCTTTCTTTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: ATGDSGLAAEKDRVNGYQATRWA*SFLSPS
Trigger: GCTGGGGGAAAGAAAGCTGCAAGCCCATCTGGTGGC...TTGGTAACCGTTAACTCTGTCTTTCTCAGCTGCAAGCCCTGAGTCTCCAGTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp ACCCTCAGCTGTTTTCTATGGCCAGGTGTCCCTTCTTCCCTTCCGCGTACTGACATCACTCCGGACATTTaGCCAGGGGATATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: TLSCFLWPGVPSSLPRTDITPDI*PGDIFR
Trigger: CCTGAAGATATCCCCTGGGCAAATGTCCGGAGTGAT...GTCAGTACGCGGAAGGGAAGAAGGGACACCTGGCCATAGAAAACAGCTGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GCTTCCAAGATCACACAAGATCAGGGGCGTTCAGGGTGCTGTGGCCACAGACCAGAAACCCTCTGCTTTTaGTCTTCTGTGCGGACATCA +
Preference number: 4 (lower is better)
Translates to: ASKITQDQGRSGCCGHRPETLCF*SSVRTS
Trigger: TGATGTCCGCACAGAAGAGCAAAAGCAGAGGGTTTC...TGGTCTGTGGCCACAGCACCCTGAACGCCCCTGATCTTGTGTGATCTTGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACCCACAATGTGGCTACTGTTaGCCCCGTACCAACCTGGAT +
Preference number: 4 (lower is better)
Translates to: PGMNKNWVTVSGHVPYHPQCGYC*PRTNLD
Trigger: ATCCAGGTTGGTACGGGGGCAACAGTAGCCACATTG...TGGGTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTTGCTCCGACGGCTGCTaGGGTTTCCCCAGACAAGAC +
Preference number: 4 (lower is better)
Translates to: VSSSTHDPGMNKNWVTVSCSDGC*GFPRQD
Trigger: GTCTTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCA...AGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACCCACAGTCTGGTACATaGTCACAGGGATCTGGACCA +
Preference number: 4 (lower is better)
Translates to: DPGMNKNWVTVSGHVPYHPQSGT*SQGSGP
Trigger: TGGTCCAGATCCCTGTGAGCATGTACCAGACTGTGG...GTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CACACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCGGGGCCATGGCCACCTaGACTGGTCCGTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: HTYTHISIHTHFRRKKSCGAMAT*TGPLPW
Trigger: CCAGGGCAACGGACCAGTGCAGGTGGCCATGGCCCC...GCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GGGAGGAGGGAGGAGGAGCTGTCCCTGTACTCAAGGTTCAGAGATTTGGCCTGTTTCAAGACATTCATCTaGCTGTGGCAAGGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: GRREEELSLYSRFRDLACFKTFI*LWQGQH
Trigger: GTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAA...ACAGGCCAAATCTCTGAACCTTGAGTACAGGGACAGCTCCTCCTCCCTCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCCGAGGAGCATCTCAGCTGGCAGACCACGCAGTCCCTGGACCTTGCAAGCACATATATTCATCTAACGTaGCTCGAAGTTTCCGAAGCA +
Preference number: 4 (lower is better)
Translates to: PEEHLSWQTTQSLDLASTYIHLT*LEVSEA
Trigger: TGCTTCGGAAACTTCGAGCCACGTTAGATGAATATA...TGTGCTTGCAAGGTCCAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GCTTCCAAGATCACACAAGATCAGGGGCGTTCAGGGTGCTGTGGCCACAGACCAGTACTTGAGCATCTCTaGGATAAATGCCCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: ASKITQDQGRSGCCGHRPVLEHL*DKCPKL
Trigger: CAGCTTCGGGCATTTATCCCAGAGATGCTCAAGTAC...TGGTCTGTGGCCACAGCACCCTGAACGCCCCTGATCTTGTGTGATCTTGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACATGGTCCGTAGTGCCTaGGTCCATGAAACCCTCTGC +
Preference number: 4 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYMVRSA*VHETLC
Trigger: GCAGAGGGTTTCATGGACCCAGGCACTACGGACCAT...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGTGAAGGGCATGGTCACCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCTACTATGTGTGGCTGTaGCCTGTGTTTGCGTTTGCT +
Preference number: 4 (lower is better)
Translates to: GEGHGHLRLSLSVAQRMTYYVWL*PVFAFA
Trigger: AGCAAACGCAAACACAGGCCACAGCCACACATAGTA...GGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTGACCATGCCCTTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GCTTCCAAGATCACACAAGATCAGGGGCGTTCAGGGTGCTGTGGCCACAGACCATACTATGTGTGGCTGTaGCCTGTGTTTGCGTTTGCT +
Preference number: 4 (lower is better)
Translates to: ASKITQDQGRSGCCGHRPYYVWL*PVFAFA
Trigger: AGCAAACGCAAACACAGGCCACAGCCACACATAGTA...TGGTCTGTGGCCACAGCACCCTGAACGCCCCTGATCTTGTGTGATCTTGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGGGTGAATTATTGGATGCTTGCGTCGTCTaGATGGTCATCTCACCTCCC +
Preference number: 4 (lower is better)
Translates to: GDCVWPRTLPPTKLGELLDACVV*MVISPP
Trigger: GGGAGGTGAGATGACCATCCAGACGACGCAAGCATC...CAATAATTCACCCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTAACGATGCCACCGCCTaGGTGGCCTCTGATGCTTGC +
Preference number: 4 (lower is better)
Translates to: VSSSTHDPGMNKNWVTVSNDATA*VASDAC
Trigger: GCAAGCATCAGAGGCCACCCAGGCGGTGGCATCGTT...AGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CACCACAAAGGAACATGGACTTTAAAGTCCCTGGACAACTTCACAATGACGATATGGCCTCAGCCAGGGTaGCGACAGCATGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: HHKGTWTLKSLDNFTMTIWPQPG*RQHGRQ
Trigger: CTGCCGCCCATGCTGTCGCCACCCTGGCTGAGGCCA...TATCGTCATTGTGAAGTTGTCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACCGCTGTCTGATATCCTaGTGGTCACAGGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: PPPEFVSSSTHDPGMNKNRCLIS*WSQGPW
Trigger: CCATGGCCCCTGTGACCACCAGGATATCAGACAGCG...GTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACAGGGAGAGTTCTGTGTaGCCACTGGGAGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYRESSV*PLGGSF
Trigger: AAAGCTGCCTCCCAGTGGCCACACAGAACTCTCCCT...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGGGTGAATTATTGAGACCACGCAGTCCCTaGACCTTGCAAGCACATCTC +
Preference number: 4 (lower is better)
Translates to: GDCVWPRTLPPTKLGELLRPRSP*TLQAHL
Trigger: GAGATGTGCTTGCAAGGTCCAGGGACTGCGTGGTCT...CAATAATTCACCCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACAGACCACGCAGTCCCTaGACCTTGCAAGCACATCTC +
Preference number: 4 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYRPRSP*TLQAHL
Trigger: GAGATGTGCTTGCAAGGTCCAGGGACTGCGTGGTCT...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGGAGGAGGGAGGAGGAGCTGTCCCTGTACTCAAGGTTCAGAGATTTGGCCTGTCCCACGGGTGTATCCTaGTCTAGGACGATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: GRREEELSLYSRFRDLACPTGVS*SRTIFL
Trigger: AAGAAAAATCGTCCTAGACCAGGATACACCCGTGGG...ACAGGCCAAATCTCTGAACCTTGAGTACAGGGACAGCTCCTCCTCCCTCCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp TTAACGGTTACCAAGAACACCCAGATAGTCAACACCTCTGAGGAGGCAAGCTGCGCGTTCAGGGTGCTGTaGCCACAGACCAGATGTCTC +
Preference number: 4 (lower is better)
Translates to: LTVTKNTQIVNTSEEASCAFRVL*PQTRCL
Trigger: GAGACATCTGGTCTGTGGCCACAGCACCCTGAACGC...GCAGCTTGCCTCCTCAGAGGTGTTGACTATCTGGGTGTTCTTGGTAACCGTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCCACCACAAAGGAACATaGACTTTAAAGTCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: RELSRHSSACGKVSTWASHHKGT*TLKSLD
Trigger: GTCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTG...GCTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp GGTGAAGGGCATGGTCACCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCGGAGTTGAGTATATCTaGGTCATCGTAAGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: GEGHGHLRLSLSVAQRMTGVEYI*VIVRGV
Trigger: GACACCTCTTACGATGACTCAGATATACTCAACTCC...GGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTGACCATGCCCTTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CTTTCCTCAGGTGAGTCCAGCAGGGAGAGTTCTGTGTGGCCACTGGGAGGCAGCTGTGTTTGCGTTTGCTaGTCTTCAAAGGCATACAAA +
Preference number: 4 (lower is better)
Translates to: LSSGESSRESSVWPLGGSCVCVC*SSKAYK
Trigger: TTTGTATGCCTTTGAAGATCAGCAAACGCAAACACA...GCTGCCTCCCAGTGGCCACACAGAACTCTCCCTGCTGGACTCACCTGAGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCATGTGATGGTACAAGATaGGCTATACTATGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: PGSFQDIHLPVARSAPGPCDGTR*AILCVA
Trigger: AGCCACACATAGTATAGCTCATCTTGTACCATCACA...TGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp GTCCCTGGACCTTGCAAGCACATCTCTGACCCACCCCATGCTGGAGCCTCTTTCTGTGATGGTACAAGATaGGCTATACTATGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: VPGPCKHISDPPHAGASFCDGTR*AILCVA
Trigger: AGCCACACATAGTATAGCTCATCTTGTACCATCACA...GAAAGAGGCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAAGGTCCAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp GCTACTGGAGACTCAGGGCTTGCAGCTGAGAAAGACAGAGTTAACGGTTACCAATCACTTGGGCAACGGTaGCCGTGGTTGGCAATTCTG +
Preference number: 4 (lower is better)
Translates to: ATGDSGLAAEKDRVNGYQSLGQR*PWLAIL
Trigger: CAGAATTGCCAACCACGGTCACCGTTGCCCAAGTGA...TTGGTAACCGTTAACTCTGTCTTTCTCAGCTGCAAGCCCTGAGTCTCCAGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACTTGCTGGGCCACTaGATGTGCTTCTATGGTAGC +
Preference number: 4 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYHLLGH*MCFYGS
Trigger: GCTACCATAGAAGCACATGCAGTGGCCCAGCAAGTG...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GGGAGGAGGGAGGAGGAGCTGTCCCTGTACTCAAGGTTCAGAGATTTGGCCTGTTGTCACCTCATCAGCTaGTGTGGAGTTGAGTATATC +
Preference number: 4 (lower is better)
Translates to: GRREEELSLYSRFRDLACCHLIS*CGVEYI
Trigger: GATATACTCAACTCCACAGCAGCTGATGAGGTGACA...ACAGGCCAAATCTCTGAACCTTGAGTACAGGGACAGCTCCTCCTCCCTCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CTTTCCTCAGGTGAGTCCAGCAGGGAGAGTTCTGTGTGGCCACTGGGAGGCAGCCACATTCTCCAAAGGTaGTGCACCAAACACTTTAAA +
Preference number: 4 (lower is better)
Translates to: LSSGESSRESSVWPLGGSHILQR*CTKHFK
Trigger: TTTAAAGTGTTTGGTGCAGCACCTTTGGAGAATGTG...GCTGCCTCCCAGTGGCCACACAGAACTCTCCCTGCTGGACTCACCTGAGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GGTGTCCCTTCTTCCCTTCCGCGTACTGACCGGGCCCAACCAAGCTTAGCTTCCCACATTCTCCAAAGGTaGTGCACCAAACACTTTAAA +
Preference number: 4 (lower is better)
Translates to: GVPSSLPRTDRAQPSLASHILQR*CTKHFK
Trigger: TTTAAAGTGTTTGGTGCAGCACCTTTGGAGAATGTG...GGAAGCTAAGCTTGGTTGGGCCCGGTCAGTACGCGGAAGGGAAGAAGGGACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CACCACAAAGGAACATGGACTTTAAAGTCCCTGGACAACTTCACAATGACGATACCTGCACTGGTCCGTTaGCCTGGGCGAGGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: HHKGTWTLKSLDNFTMTIPALVR*PGRGWS
Trigger: TGACCAGCCTCGCCCAGGGCAACGGACCAGTGCAGG...TATCGTCATTGTGAAGTTGTCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp ATTGTTTCCACAGCGCACCTTGATTTCATACAGATAATTCCATGCGGGTTTCATGGGGCCATGGCCACCTaGACTGGTCCGTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: IVSTAHLDFIQIIPCGFHGAMAT*TGPLPW
Trigger: CCAGGGCAACGGACCAGTGCAGGTGGCCATGGCCCC...ATGAAACCCGCATGGAATTATCTGTATGAAATCAAGGTGCGCTGTGGAAACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp TTAACGGTTACCAAGAACACCCAGATAGTCAACACCTCTGAGGAGGCAAGCTGCGCAGTCCCTGGACCTTaGAAGCACATCTCTGACCCA +
Preference number: 4 (lower is better)
Translates to: LTVTKNTQIVNTSEEASCAVPGP*KHISDP
Trigger: TGGGTCAGAGATGTGCTTGCAAGGTCCAGGGACTGC...GCAGCTTGCCTCCTCAGAGGTGTTGACTATCTGGGTGTTCTTGGTAACCGTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp AAGCACACTTACACGCACGCACTCCTCAAACCCCTAATACTTCGGTTACCTTCACCTGGGCCACGAGGTTaGATCAAGGAACATGGGCCT +
Preference number: 4 (lower is better)
Translates to: KHTYTHALLKPLILRLPSPGPRG*IKEHGP
Trigger: AGGCCCATGTTCCTTGATGCAACCTCGTGGCCCAGG...TGAAGGTAACCGAAGTATTAGGGGTTTGAGGAGTGCGTGCGTGTAAGTGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGACAGAATCCATGCTCTaGTACTGGGGTTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: PGAFKTFICLWQGQHLGQTESML*YWGFAF
Trigger: AAAAGCAAAACCCCAGTAGCAGAGCATGGATTCTGT...CTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CTTTCCTCAGGTGAGTCCAGCAGGGAGAGTTCTGTGTGGCCACTGGGAGGCAGCCCTCTTCCGGATAGATaGATTAGACTCAAATACATG +
Preference number: 4 (lower is better)
Translates to: LSSGESSRESSVWPLGGSPLPDR*IRLKYM
Trigger: CATGTATTTGAGTCTAATCCATCTATCCGGAAGAGG...GCTGCCTCCCAGTGGCCACACAGAACTCTCCCTGCTGGACTCACCTGAGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCTTCAGGCCACCAGATaGGCTTGCAGCTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYLQATR*ACSFLS
Trigger: GGAAAGAAAGCTGCAAGCCCATCTGGTGGCCTGAAG...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACGCCCCCGTACCAACCTaGATAAGTGAGACAGTGCCA +
Preference number: 4 (lower is better)
Translates to: PPPEFVSSSTHDPGMNKNAPVPT*ISETVP
Trigger: TGGCACTGTCTCACTTATCCAGGTTGGTACGGGGGC...GTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GCTACTGGAGACTCAGGGCTTGCAGCTGAGAAAGACAGAGTTAACGGTTACCAAGCCCCCGTACCAACCTaGATAAGTGAGACAGTGCCA +
Preference number: 4 (lower is better)
Translates to: ATGDSGLAAEKDRVNGYQAPVPT*ISETVP
Trigger: TGGCACTGTCTCACTTATCCAGGTTGGTACGGGGGC...TTGGTAACCGTTAACTCTGTCTTTCTCAGCTGCAAGCCCTGAGTCTCCAGTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGGGTGAATTATTGCTGGTCACCACAGTCTaGTACATGCTCACAGGGATC +
Preference number: 4 (lower is better)
Translates to: GDCVWPRTLPPTKLGELLLVTTV*YMLTGI
Trigger: GATCCCTGTGAGCATGTACCAGACTGTGGTGACCAG...CAATAATTCACCCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCTGGTCACCACAGTCTaGTACATGCTCACAGGGATC +
Preference number: 4 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYLVTTV*YMLTGI
Trigger: GATCCCTGTGAGCATGTACCAGACTGTGGTGACCAG...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTCGCTGTCTGATATCCTaGTGGTCACAGGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: VSSSTHDPGMNKNWVTVSRCLIS*WSQGPW
Trigger: CCATGGCCCCTGTGACCACCAGGATATCAGACAGCG...AGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CTTTCCTCAGGTGAGTCCAGCAGGGAGAGTTCTGTGTGGCCACTGGGAGGCAGCAACGATGCCATAATATaGCTGTATGTCACTGTTCCA +
Preference number: 4 (lower is better)
Translates to: LSSGESSRESSVWPLGGSNDAII*LYVTVP
Trigger: TGGAACAGTGACATACAGCCATATTATGGCATCGTT...GCTGCCTCCCAGTGGCCACACAGAACTCTCCCTGCTGGACTCACCTGAGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGGGTGAATTATTGGGTGAATTCAGCTACTaGAGACTCAGGGCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: GDCVWPRTLPPTKLGELLGEFSY*RLRACS
Trigger: GCTGCAAGCCCTGAGTCTCCAGTAGCTGAATTCACC...CAATAATTCACCCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCTTAGACTCAAATACATaGGGCCGTTTCCGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: RELSRHSSACGKVSTWASLDSNT*GRFRFF
Trigger: AAAGAAACGGAAACGGCCTCATGTATTTGAGTCTAA...GCTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGTTAGACTCAAATACATaGGGCCGTTTCCGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: PGAFKTFICLWQGQHLGQLDSNT*GRFRFF
Trigger: AAAGAAACGGAAACGGCCTCATGTATTTGAGTCTAA...CTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACACCAACCTGGATAAGTaGGACAGTGCCATCAGGGTT +
Preference number: 4 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYTNLDK*DSAIRV
Trigger: AACCCTGATGGCACTGTCTCACTTATCCAGGTTGGT...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp AGAAAATTGCTCCCACGGGTGTATCCTGGTCTAGGACGATTTTTCTTTCCTTCCCTTGGCCGTCCATGGTaGCTGCGCTGTCTGATATCC +
Preference number: 4 (lower is better)
Translates to: RKLLPRVYPGLGRFFFPSLGRPW*LRCLIS
Trigger: GGATATCAGACAGCGCAGTCACCATGGACGGCCAAG...GGAAGGAAAGAAAAATCGTCCTAGACCAGGATACACCCGTGGGAGCAATTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCAGGGAGGCAGCTTTGGTaGAGGGCATGGTCACCTCCG +
Preference number: 4 (lower is better)
Translates to: HIHTHKYTHTFPQKEVLPGRQLW*RAWSPP
Trigger: CGGAGGTGACCATGCCCTTCACCAAAGCTGCCTCCC...TGGCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp AGAAAATTGCTCCCACGGGTGTATCCTGGTCTAGGACGATTTTTCTTTCCTTCCTTGCAAGCACATCTCTaGCCCACCCCATGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: RKLLPRVYPGLGRFFFPSLQAHL*PTPCWS
Trigger: GCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAA...GGAAGGAAAGAAAAATCGTCCTAGACCAGGATACACCCGTGGGAGCAATTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCTGGGCCACTGCATGTaGTTCTATGGTAGCCATATG +
Preference number: 4 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYLGHCM*FYGSHM
Trigger: CATATGGCTACCATAGAAGCACATGCAGTGGCCCAG...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACCCACAGAGGACAATAGCTTaGTGTCCCACACGAGTAGTA +
Preference number: 4 (lower is better)
Translates to: PGMNKNWVTVSGHVPYHPQRTIA*CPTRVV
Trigger: TACTACTCGTGTGGGACAGCAAGCTATTGTCCTCTG...TGGGTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCATTCTCCAAAGGTGCTaGACCAAACACTTTAAAGAC +
Preference number: 4 (lower is better)
Translates to: RELSRHSSACGKVSTWASILQRC*TKHFKD
Trigger: GTCTTTAAAGTGTTTGGTGCAGCACCTTTGGAGAAT...GCTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAATTCTCCAAAGGTGCTaGACCAAACACTTTAAAGAC +
Preference number: 4 (lower is better)
Translates to: PGSFQDIHLPVARSAPGPILQRC*TKHFKD
Trigger: GTCTTTAAAGTGTTTGGTGCAGCACCTTTGGAGAAT...TGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCCACATTCTCCAAAGGTaGTGCACCAAACACTTTAAA +
Preference number: 4 (lower is better)
Translates to: RELSRHSSACGKVSTWASHILQR*CTKHFK
Trigger: TTTAAAGTGTTTGGTGCAGCACCTTTGGAGAATGTG...GCTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CACACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCGCAGGGGCGTGTTCTaGCAGAGCAGACTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: HTYTHISIHTHFRRKKSCRRGVF*QSRLQV
Trigger: GACCTGGAGTCTGCTCTGGCAGAACACGCCCCTGCG...GCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCACGCAGGGGCGTGTTCTaGCAGAGCAGACTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: HIHTHKYTHTFPQKEVLPRRGVF*QSRLQV
Trigger: GACCTGGAGTCTGCTCTGGCAGAACACGCCCCTGCG...TGGCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp AAGCACACTTACACGCACGCACTCCTCAAACCCCTAATACTTCGGTTACCTTCACATCTCTGGGATAAATaGCCGAAGCTGGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: KHTYTHALLKPLILRLPSHLWDK*PKLGLG
Trigger: ACCCAGGCCCAGCTTCGGGCATTTATCCCAGAGATG...TGAAGGTAACCGAAGTATTAGGGGTTTGAGGAGTGCGTGCGTGTAAGTGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACGCTTTTGCTCTTCTGTaGGGACATCACTCCGGACAT +
Preference number: 4 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYAFALL*GHHSGH
Trigger: ATGTCCGGAGTGATGTCCGCACAGAAGAGCAAAAGC...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACCCAGAAACCCTCTGCTTTTaGTCTTCTGTGCGGACATCA +
Preference number: 4 (lower is better)
Translates to: PGMNKNWVTVSGHVPYHPETLCF*SSVRTS
Trigger: TGATGTCCGCACAGAAGAGCAAAAGCAGAGGGTTTC...TGGGTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGTGGCCTCTGATGCTTaGGTCGTCTGGATGGTCATC +
Preference number: 4 (lower is better)
Translates to: VSSSTHDPGMNKNWVTVSVASDA*VVWMVI
Trigger: GATGACCATCCAGACGACGCAAGCATCAGAGGCCAC...AGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp AGAAAATTGCTCCCACGGGTGTATCCTGGTCTAGGACGATTTTTCTTTCCTTCCTTGGACTCCAGTAAGTaGTCCGACGGCTGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: RKLLPRVYPGLGRFFFPSLDSSK*SDGCCG
Trigger: ACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAA...GGAAGGAAAGAAAAATCGTCCTAGACCAGGATACACCCGTGGGAGCAATTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACCCAGACAGTAGAGAAAATTaGTCCCACGGGTGTATCCTG +
Preference number: 4 (lower is better)
Translates to: PGMNKNWVTVSGHVPYHPDSREN*SHGCIL
Trigger: CAGGATACACCCGTGGGAGCAATTTTCTCTACTGTC...TGGGTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GCTTCCAAGATCACACAAGATCAGGGGCGTTCAGGGTGCTGTGGCCACAGACCAACAGAATCCATGCTCTaGTACTGGGGTTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: ASKITQDQGRSGCCGHRPTESML*YWGFAF
Trigger: AAAAGCAAAACCCCAGTAGCAGAGCATGGATTCTGT...TGGTCTGTGGCCACAGCACCCTGAACGCCCCTGATCTTGTGTGATCTTGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACATAAATGCCCGAAGCTaGGCCTGGGTCATTTTGTCC +
Preference number: 4 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYINARS*AWVILS
Trigger: GGACAAAATGACCCAGGCCCAGCTTCGGGCATTTAT...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACCCAGTACTTGAGCATCTCTaGGATAAATGCCCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PGMNKNWVTVSGHVPYHPVLEHL*DKCPKL
Trigger: CAGCTTCGGGCATTTATCCCAGAGATGCTCAAGTAC...TGGGTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGGGTGAATTATTGGAGCTATACTATGTGTaGCTGTGGCCTGTGTTTGCG +
Preference number: 4 (lower is better)
Translates to: GDCVWPRTLPPTKLGELLELYYV*LWPVFA
Trigger: CGCAAACACAGGCCACAGCCACACATAGTATAGCTC...CAATAATTCACCCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GCTACTGGAGACTCAGGGCTTGCAGCTGAGAAAGACAGAGTTAACGGTTACCAAAAGCATCAGCCAATGTaGCTACTGTTGCCCCCGTAC +
Preference number: 4 (lower is better)
Translates to: ATGDSGLAAEKDRVNGYQKHQPM*LLLPPY
Trigger: GTACGGGGGCAACAGTAGCCACATTGGCTGATGCTT...TTGGTAACCGTTAACTCTGTCTTTCTCAGCTGCAAGCCCTGAGTCTCCAGTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGGGTGAATTATTGCACCTCCCTGTAACGTaGCCCAATTTTGTTCCACCT +
Preference number: 4 (lower is better)
Translates to: GDCVWPRTLPPTKLGELLHLPVT*PNFVPP
Trigger: AGGTGGAACAAAATTGGGCCACGTTACAGGGAGGTG...CAATAATTCACCCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp TTAACGGTTACCAAGAACACCCAGATAGTCAACACCTCTGAGGAGGCAAGCTGCCTTGCGTCGTCTGGATaGTCATCTCACCTCCCTGTA +
Preference number: 4 (lower is better)
Translates to: LTVTKNTQIVNTSEEASCLASSG*SSHLPV
Trigger: TACAGGGAGGTGAGATGACCATCCAGACGACGCAAG...GCAGCTTGCCTCCTCAGAGGTGTTGACTATCTGGGTGTTCTTGGTAACCGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CTTCTTGTTCATTCCAGCGCCTCCTCTGTGAAGCTACAGACAGTAGAGAAAATTTGCCCTGGGCGAGGCTaGTCACCACAGTCTGGTACA +
Preference number: 4 (lower is better)
Translates to: LLVHSSASSVKLQTVEKICPGRG*SPQSGT
Trigger: TGTACCAGACTGTGGTGACCAGCCTCGCCCAGGGCA...AATTTTCTCTACTGTCTGTAGCTTCACAGAGGAGGCGCTGGAATGAACAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACGGTATGAACAAAAACTaGGTGACTGTGTCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: DPGMNKNWVTVSGHVPYHGMNKN*VTVSGH
Trigger: GTGGCCAGACACAGTCACCCAGTTTTTGTTCATACC...GTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTATGCTCACAGGGATCTaGACCAGGCCTGTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: VSSSTHDPGMNKNWVTVSMLTGI*TRPVAL
Trigger: CAAAGCCACAGGCCTGGTCCAGATCCCTGTGAGCAT...AGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311967.6
ENST00000353868.5
CDS-3UTR TCA 90 bp CACCACAAAGGAACATGGACTTTAAAGTCCCTGGACAACTTCACAATGACGATAGAGAGGCGGCAGTTCTaGGTTAACCTCCTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: HHKGTWTLKSLDNFTMTIERRQF*VNLLWR
Trigger: GCGCCACAGGAGGTTAACTCAGAACTGCCGCCTCTC...TATCGTCATTGTGAAGTTGTCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp GGTGAAGGGCATGGTCACCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCTGTGTTTGCGTTTGCTaGTCTTCAAAGGCATACAAA +
Preference number: 4 (lower is better)
Translates to: GEGHGHLRLSLSVAQRMTCVCVC*SSKAYK
Trigger: TTTGTATGCCTTTGAAGATCAGCAAACGCAAACACA...GGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTGACCATGCCCTTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp ACGGTTACCAAGAACACCCAGATAGTCAACACCTCTGAGGAGGCAAGCTGCTCCCTGGACTACAGTCTGTaGTGGTACAAGATGAGCTAT +
Preference number: 4 (lower is better)
Translates to: TVTKNTQIVNTSEEASCSLDYSL*WYKMSY
Trigger: ATAGCTCATCTTGTACCATCACAGACTGTAGTCCAG...GGAGCAGCTTGCCTCCTCAGAGGTGTTGACTATCTGGGTGTTCTTGGTAACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CACCACAAAGGAACATGGACTTTAAAGTCCCTGGACAACTTCACAATGACGATAGCCACATGGACCTGCTaGACTTGCTGGGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: HHKGTWTLKSLDNFTMTIATWTC*TCWATA
Trigger: TGCAGTGGCCCAGCAAGTGCAGCAGGTCCATGTGGC...TATCGTCATTGTGAAGTTGTCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACCCATGTCACCTCATCAGCTaGTGTGGAGTTGAGTATATC +
Preference number: 4 (lower is better)
Translates to: PGMNKNWVTVSGHVPYHPCHLIS*CGVEYI
Trigger: GATATACTCAACTCCACAGCAGCTGATGAGGTGACA...TGGGTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACTGTCACCTCATCAGCTaGTGTGGAGTTGAGTATATC +
Preference number: 4 (lower is better)
Translates to: DPGMNKNWVTVSGHVPYHCHLIS*CGVEYI
Trigger: GATATACTCAACTCCACAGCAGCTGATGAGGTGACA...GTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCAGAGGACAATAGCTTaGTGTCCCACACGAGTAGTA +
Preference number: 4 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYQRTIA*CPTRVV
Trigger: TACTACTCGTGTGGGACAGCAAGCTATTGTCCTCTG...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GGGAGGAGGGAGGAGGAGCTGTCCCTGTACTCAAGGTTCAGAGATTTGGCCTGTATTCTCCAAAGGTGCTaGACCAAACACTTTAAAGAC +
Preference number: 4 (lower is better)
Translates to: GRREEELSLYSRFRDLACILQRC*TKHFKD
Trigger: GTCTTTAAAGTGTTTGGTGCAGCACCTTTGGAGAAT...ACAGGCCAAATCTCTGAACCTTGAGTACAGGGACAGCTCCTCCTCCCTCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACGGTCTTCCAGGATCATaGTCTTGTACTTACGCACCA +
Preference number: 4 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYGLPGS*SCTYAP
Trigger: TGGTGCGTAAGTACAAGAGCATGATCCTGGAAGACC...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp TTAACGGTTACCAAGAACACCCAGATAGTCAACACCTCTGAGGAGGCAAGCTGCATCACTCCGGACATTTaGCCAGGGGATATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LTVTKNTQIVNTSEEASCITPDI*PGDIFR
Trigger: CCTGAAGATATCCCCTGGGCAAATGTCCGGAGTGAT...GCAGCTTGCCTCCTCAGAGGTGTTGACTATCTGGGTGTTCTTGGTAACCGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCACTGAGAAGCTGCCACTaGGGCCTCTGCCAACGATGC +
Preference number: 4 (lower is better)
Translates to: HIHTHKYTHTFPQKEVLPLRSCH*GLCQRC
Trigger: GCATCGTTGGCAGAGGCCGCAGTGGCAGCTTCTCAG...TGGCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CACACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCTGAGAAGCTGCCACTaGGGCCTCTGCCAACGATGC +
Preference number: 4 (lower is better)
Translates to: HTYTHISIHTHFRRKKSCLRSCH*GLCQRC
Trigger: GCATCGTTGGCAGAGGCCGCAGTGGCAGCTTCTCAG...GCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGGGTGAATTATTGTTCAAGACATTCATCTaGCTGTGGCAAGGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: GDCVWPRTLPPTKLGELLFKTFI*LWQGQH
Trigger: GTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAA...CAATAATTCACCCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GCTACTGGAGACTCAGGGCTTGCAGCTGAGAAAGACAGAGTTAACGGTTACCAAGATCCACTTGCGACCTaGACGATCTGCCATAAAGAG +
Preference number: 4 (lower is better)
Translates to: ATGDSGLAAEKDRVNGYQDPLAT*TICHKE
Trigger: CTCTTTATGGCAGATCGTGCAGGTCGCAAGTGGATC...TTGGTAACCGTTAACTCTGTCTTTCTCAGCTGCAAGCCCTGAGTCTCCAGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353868.5
CDS-3UTR GCA 90 bp CTTCTTGTTCATTCCAGCGCCTCCTCTGTGAAGCTACAGACAGTAGAGAAAATTCCTGGGCCACGAGGTTaGATCAAGGAACATGGGCCT +
Preference number: 4 (lower is better)
Translates to: LLVHSSASSVKLQTVEKIPGPRG*IKEHGP
Trigger: AGGCCCATGTTCCTTGATGCAACCTCGTGGCCCAGG...AATTTTCTCTACTGTCTGTAGCTTCACAGAGGAGGCGCTGGAATGAACAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGTGAAGGGCATGGTCACCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCTATATTCATCTAACGTaGCTCGAAGTTTCCGAAGCA +
Preference number: 4 (lower is better)
Translates to: GEGHGHLRLSLSVAQRMTYIHLT*LEVSEA
Trigger: TGCTTCGGAAACTTCGAGCCACGTTAGATGAATATA...GGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTGACCATGCCCTTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GCTTCCAAGATCACACAAGATCAGGGGCGTTCAGGGTGCTGTGGCCACAGACCATATATTCATCTAACGTaGCTCGAAGTTTCCGAAGCA +
Preference number: 4 (lower is better)
Translates to: ASKITQDQGRSGCCGHRPYIHLT*LEVSEA
Trigger: TGCTTCGGAAACTTCGAGCCACGTTAGATGAATATA...TGGTCTGTGGCCACAGCACCCTGAACGCCCCTGATCTTGTGTGATCTTGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp TTAACGGTTACCAAGAACACCCAGATAGTCAACACCTCTGAGGAGGCAAGCTGCATAAATGCCCGAAGCTaGGCCTGGGTCATTTTGTCC +
Preference number: 4 (lower is better)
Translates to: LTVTKNTQIVNTSEEASCINARS*AWVILS
Trigger: GGACAAAATGACCCAGGCCCAGCTTCGGGCATTTAT...GCAGCTTGCCTCCTCAGAGGTGTTGACTATCTGGGTGTTCTTGGTAACCGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACGTACTTGAGCATCTCTaGGATAAATGCCCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYVLEHL*DKCPKL
Trigger: CAGCTTCGGGCATTTATCCCAGAGATGCTCAAGTAC...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp TTAACGGTTACCAAGAACACCCAGATAGTCAACACCTCTGAGGAGGCAAGCTGCGAGCTATACTATGTGTaGCTGTGGCCTGTGTTTGCG +
Preference number: 4 (lower is better)
Translates to: LTVTKNTQIVNTSEEASCELYYV*LWPVFA
Trigger: CGCAAACACAGGCCACAGCCACACATAGTATAGCTC...GCAGCTTGCCTCCTCAGAGGTGTTGACTATCTGGGTGTTCTTGGTAACCGTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACCACCTCCCTGTAACGTaGCCCAATTTTGTTCCACCT +
Preference number: 4 (lower is better)
Translates to: PPPEFVSSSTHDPGMNKNHLPVT*PNFVPP
Trigger: AGGTGGAACAAAATTGGGCCACGTTACAGGGAGGTG...GTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTCTTGCGTCGTCTGGATaGTCATCTCACCTCCCTGTA +
Preference number: 4 (lower is better)
Translates to: VSSSTHDPGMNKNWVTVSLASSG*SSHLPV
Trigger: TACAGGGAGGTGAGATGACCATCCAGACGACGCAAG...AGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp ATTGTTTCCACAGCGCACCTTGATTTCATACAGATAATTCCATGCGGGTTTCATATGCCACCGCCTGGGTaGCCTCTGATGCTTGCGTCG +
Preference number: 4 (lower is better)
Translates to: IVSTAHLDFIQIIPCGFHMPPPG*PLMLAS
Trigger: CGACGCAAGCATCAGAGGCCACCCAGGCGGTGGCAT...ATGAAACCCGCATGGAATTATCTGTATGAAATCAAGGTGCGCTGTGGAAACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCAAACGATGCCACCGCCTaGGTGGCCTCTGATGCTTGC +
Preference number: 4 (lower is better)
Translates to: HIHTHKYTHTFPQKEVLPNDATA*VASDAC
Trigger: GCAAGCATCAGAGGCCACCCAGGCGGTGGCATCGTT...TGGCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCAAGGGTGGCGACAGCATaGGCGGCAGCTTCGCTGTTA +
Preference number: 4 (lower is better)
Translates to: HIHTHKYTHTFPQKEVLPRVATA*AAASLL
Trigger: TAACAGCGAAGCTGCCGCCCATGCTGTCGCCACCCT...TGGCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCATGCCCTGGGCGAGGCTaGTCACCACAGTCTGGTACA +
Preference number: 4 (lower is better)
Translates to: HIHTHKYTHTFPQKEVLPCPGRG*SPQSGT
Trigger: TGTACCAGACTGTGGTGACCAGCCTCGCCCAGGGCA...TGGCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACGGTATGAACAAAAACTaGGTGACTGTGTCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYGMNKN*VTVSGH
Trigger: GTGGCCAGACACAGTCACCCAGTTTTTGTTCATACC...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCAAAGCTGCTCCCGGCCTaGGCCACGAGGTTGCATCAA +
Preference number: 4 (lower is better)
Translates to: HIHTHKYTHTFPQKEVLPKLLPA*ATRLHQ
Trigger: TTGATGCAACCTCGTGGCCCAGGCCGGGAGCAGCTT...TGGCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGTGAATTCAGCTACTaGAGACTCAGGGCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: VSSSTHDPGMNKNWVTVSGEFSY*RLRACS
Trigger: GCTGCAAGCCCTGAGTCTCCAGTAGCTGAATTCACC...AGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACGGAGTTGAGTATATCTaGGTCATCGTAAGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYGVEYI*VIVRGV
Trigger: GACACCTCTTACGATGACTCAGATATACTCAACTCC...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CTTCTTGTTCATTCCAGCGCCTCCTCTGTGAAGCTACAGACAGTAGAGAAAATTTCACTTGGGCAACGGTaGCCGTGGTTGGCAATTCTG +
Preference number: 4 (lower is better)
Translates to: LLVHSSASSVKLQTVEKISLGQR*PWLAIL
Trigger: CAGAATTGCCAACCACGGTCACCGTTGCCCAAGTGA...AATTTTCTCTACTGTCTGTAGCTTCACAGAGGAGGCGCTGGAATGAACAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp ATTGTTTCCACAGCGCACCTTGATTTCATACAGATAATTCCATGCGGGTTTCATGCCACATGGACCTGCTaGACTTGCTGGGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: IVSTAHLDFIQIIPCGFHATWTC*TCWATA
Trigger: TGCAGTGGCCCAGCAAGTGCAGCAGGTCCATGTGGC...ATGAAACCCGCATGGAATTATCTGTATGAAATCAAGGTGCGCTGTGGAAACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGGGTGAATTATTGTGTCACCTCATCAGCTaGTGTGGAGTTGAGTATATC +
Preference number: 4 (lower is better)
Translates to: GDCVWPRTLPPTKLGELLCHLIS*CGVEYI
Trigger: GATATACTCAACTCCACAGCAGCTGATGAGGTGACA...CAATAATTCACCCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp TTAACGGTTACCAAGAACACCCAGATAGTCAACACCTCTGAGGAGGCAAGCTGCGGTCTTCCAGGATCATaGTCTTGTACTTACGCACCA +
Preference number: 4 (lower is better)
Translates to: LTVTKNTQIVNTSEEASCGLPGS*SCTYAP
Trigger: TGGTGCGTAAGTACAAGAGCATGATCCTGGAAGACC...GCAGCTTGCCTCCTCAGAGGTGTTGACTATCTGGGTGTTCTTGGTAACCGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACGAAACCCTCTGCTTTTaGTCTTCTGTGCGGACATCA +
Preference number: 4 (lower is better)
Translates to: PPPEFVSSSTHDPGMNKNETLCF*SSVRTS
Trigger: TGATGTCCGCACAGAAGAGCAAAAGCAGAGGGTTTC...GTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp AGAAAATTGCTCCCACGGGTGTATCCTGGTCTAGGACGATTTTTCTTTCCTTCCCAATGTGGCTACTGTTaGCCCCGTACCAACCTGGAT +
Preference number: 4 (lower is better)
Translates to: RKLLPRVYPGLGRFFFPSQCGYC*PRTNLD
Trigger: ATCCAGGTTGGTACGGGGGCAACAGTAGCCACATTG...GGAAGGAAAGAAAAATCGTCCTAGACCAGGATACACCCGTGGGAGCAATTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp ATTGTTTCCACAGCGCACCTTGATTTCATACAGATAATTCCATGCGGGTTTCATTGCTCCGACGGCTGCTaGGGTTTCCCCAGACAAGAC +
Preference number: 4 (lower is better)
Translates to: IVSTAHLDFIQIIPCGFHCSDGC*GFPRQD
Trigger: GTCTTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCA...ATGAAACCCGCATGGAATTATCTGTATGAAATCAAGGTGCGCTGTGGAAACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CACACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCAAGTGCTCCGACGGCTaGTGCGGTTTCCCCAGACAA +
Preference number: 4 (lower is better)
Translates to: HTYTHISIHTHFRRKKSCKCSDG*CGFPRQ
Trigger: TTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCACTT...GCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGATCCACTTGCGACCTaGACGATCTGCCATAAAGAG +
Preference number: 4 (lower is better)
Translates to: VSSSTHDPGMNKNWVTVSDPLAT*TICHKE
Trigger: CTCTTTATGGCAGATCGTGCAGGTCGCAAGTGGATC...AGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311967.6
ENST00000353868.5
CDS-3UTR GCA 90 bp GCTACTGGAGACTCAGGGCTTGCAGCTGAGAAAGACAGAGTTAACGGTTACCAAGACAGTAGAGAAAATTaGTCCCACGGGTGTATCCTG +
Preference number: 4 (lower is better)
Translates to: ATGDSGLAAEKDRVNGYQDSREN*SHGCIL
Trigger: CAGGATACACCCGTGGGAGCAATTTTCTCTACTGTC...TTGGTAACCGTTAACTCTGTCTTTCTCAGCTGCAAGCCCTGAGTCTCCAGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACGACAGTAGAGAAAATTaGTCCCACGGGTGTATCCTG +
Preference number: 4 (lower is better)
Translates to: PPPEFVSSSTHDPGMNKNDSREN*SHGCIL
Trigger: CAGGATACACCCGTGGGAGCAATTTTCTCTACTGTC...GTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GTGAAATTGACAATGCAGTTTCTTCACCAATCCCAGAAAATCAAGAGTGGTGCTCAGGGGCGTTCAGGGTaGTGTGGCCACAGACCAGAT +
Preference number: 4 (lower is better)
Translates to: VKLTMQFLHQSQKIKSGAQGRSG*CGHRPD
Trigger: ATCTGGTCTGTGGCCACAGCACCCTGAACGCCCCTG...AGCACCACTCTTGATTTTCTGGGATTGGTGAAGAAACTGCATTGTCAATTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CACACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCGCCCGAAGCTGGGCCTaGGTCATTTTGTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: HTYTHISIHTHFRRKKSCARSWA*VILSTE
Trigger: CTCTGTGGACAAAATGACCCAGGCCCAGCTTCGGGC...GCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTATAAATGCCCGAAGCTaGGCCTGGGTCATTTTGTCC +
Preference number: 4 (lower is better)
Translates to: VSSSTHDPGMNKNWVTVSINARS*AWVILS
Trigger: GGACAAAATGACCCAGGCCCAGCTTCGGGCATTTAT...AGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACCCAGGGTTACTAAAAGTCTaGACTACAGTCTGTGATGGT +
Preference number: 4 (lower is better)
Translates to: PGMNKNWVTVSGHVPYHPGLLKV*TTVCDG
Trigger: ACCATCACAGACTGTAGTCCAGACTTTTAGTAACCC...TGGGTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACGGGTTACTAAAAGTCTaGACTACAGTCTGTGATGGT +
Preference number: 4 (lower is better)
Translates to: DPGMNKNWVTVSGHVPYHGLLKV*TTVCDG
Trigger: ACCATCACAGACTGTAGTCCAGACTTTTAGTAACCC...GTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp AACTATTTGGAGGTTATTTCACCACAAAGGAACATGGACTTTAAAGTCCCTGGAATGCCACCGCCTGGGTaGCCTCTGATGCTTGCGTCG +
Preference number: 4 (lower is better)
Translates to: NYLEVISPQRNMDFKVPGMPPPG*PLMLAS
Trigger: CGACGCAAGCATCAGAGGCCACCCAGGCGGTGGCAT...TCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTGAAATAACCTCCAAATAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp AAGCACACTTACACGCACGCACTCCTCAAACCCCTAATACTTCGGTTACCTTCAATGCTCACAGGGATCTaGACCAGGCCATTAGCATCT +
Preference number: 4 (lower is better)
Translates to: KHTYTHALLKPLILRLPSMLTGI*TRPLAS
Trigger: AGATGCTAATGGCCTGGTCCAGATCCCTGTGAGCAT...TGAAGGTAACCGAAGTATTAGGGGTTTGAGGAGTGCGTGCGTGTAAGTGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp ATTGTTTCCACAGCGCACCTTGATTTCATACAGATAATTCCATGCGGGTTTCATACCACCTCCACAGCTTaGCCGTCCATGGTGACTGCG +
Preference number: 4 (lower is better)
Translates to: IVSTAHLDFIQIIPCGFHTTSTA*PSMVTA
Trigger: CGCAGTCACCATGGACGGCCAAGCTGTGGAGGTGGT...ATGAAACCCGCATGGAATTATCTGTATGAAATCAAGGTGCGCTGTGGAAACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCAGCGTTCAGGGTGCTGTaGCCACAGACCAGATGTCTC +
Preference number: 4 (lower is better)
Translates to: HIHTHKYTHTFPQKEVLPAFRVL*PQTRCL
Trigger: GAGACATCTGGTCTGTGGCCACAGCACCCTGAACGC...TGGCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp AGAAAATTGCTCCCACGGGTGTATCCTGGTCTAGGACGATTTTTCTTTCCTTCCGGTGAATTCAGCTACTaGAGACTCAGGGCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: RKLLPRVYPGLGRFFFPSGEFSY*RLRACS
Trigger: GCTGCAAGCCCTGAGTCTCCAGTAGCTGAATTCACC...GGAAGGAAAGAAAAATCGTCCTAGACCAGGATACACCCGTGGGAGCAATTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CACACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCGAATTCCGTCGATGGTaGGAGGCGGCAGTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: HTYTHISIHTHFRRKKSCEFRRW*EAAVLS
Trigger: ACTCAGAACTGCCGCCTCTCACCATCGACGGAATTC...GCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCAGAATTCCGTCGATGGTaGGAGGCGGCAGTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: HIHTHKYTHTFPQKEVLPEFRRW*EAAVLS
Trigger: ACTCAGAACTGCCGCCTCTCACCATCGACGGAATTC...TGGCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACTGTGATGGTACAAGATaGGCTATACTATGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYCDGTR*AILCVA
Trigger: AGCCACACATAGTATAGCTCATCTTGTACCATCACA...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp TTAACGGTTACCAAGAACACCCAGATAGTCAACACCTCTGAGGAGGCAAGCTGCCTGGACTACAGTCTGTaGTGGTACAAGATGAGCTAT +
Preference number: 4 (lower is better)
Translates to: LTVTKNTQIVNTSEEASCLDYSL*WYKMSY
Trigger: ATAGCTCATCTTGTACCATCACAGACTGTAGTCCAG...GCAGCTTGCCTCCTCAGAGGTGTTGACTATCTGGGTGTTCTTGGTAACCGTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp AGAAAATTGCTCCCACGGGTGTATCCTGGTCTAGGACGATTTTTCTTTCCTTCCACCAACCTGGATAAGTaGGACAGTGCCATCAGGGTT +
Preference number: 4 (lower is better)
Translates to: RKLLPRVYPGLGRFFFPSTNLDK*DSAIRV
Trigger: AACCCTGATGGCACTGTCTCACTTATCCAGGTTGGT...GGAAGGAAAGAAAAATCGTCCTAGACCAGGATACACCCGTGGGAGCAATTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp GTGAAATTGACAATGCAGTTTCTTCACCAATCCCAGAAAATCAAGAGTGGTGCTGGTGACTGCGCTGTCTaGTATCCTGGTGGTCACAGG +
Preference number: 4 (lower is better)
Translates to: VKLTMQFLHQSQKIKSGAGDCAV*YPGGHR
Trigger: CCTGTGACCACCAGGATATCAGACAGCGCAGTCACC...AGCACCACTCTTGATTTTCTGGGATTGGTGAAGAAACTGCATTGTCAATTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACTTCCACAGCGCACCTTaGTTTCATACAGATAATTCC +
Preference number: 4 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYFHSAP*FHTDNS
Trigger: GGAATTATCTGTATGAAATCAAGGTGCGCTGTGGAA...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp GCTACTGGAGACTCAGGGCTTGCAGCTGAGAAAGACAGAGTTAACGGTTACCAACTCCGTGTTCCTCCATaGAGTTCTACAAGTTTTGTC +
Preference number: 4 (lower is better)
Translates to: ATGDSGLAAEKDRVNGYQLRVPP*SSTSFV
Trigger: GACAAAACTTGTAGAACTTCATGGAGGAACACGGAG...TTGGTAACCGTTAACTCTGTCTTTCTCAGCTGCAAGCCCTGAGTCTCCAGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353868.5
ENST00000393230.6
CDS-3UTR TCA 90 bp ATTGTTTCCACAGCGCACCTTGATTTCATACAGATAATTCCATGCGGGTTTCATGATAGTCAACACCTCTaGGGAGGCAAGCTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: IVSTAHLDFIQIIPCGFHDSQHL*GGKLLP
Trigger: CGGGAGCAGCTTGCCTCCTCAGAGGTGTTGACTATC...ATGAAACCCGCATGGAATTATCTGTATGAAATCAAGGTGCGCTGTGGAAACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CACACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCATTCCCACAGGACCTaGAGCTGCCAGATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: HTYTHISIHTHFRRKKSCHSHRT*SCQMSC
Trigger: ACAGCTCATCTGGCAGCTGCAGGTCCTGTGGGAATG...GCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACAGCAAACGTGTTTGTTaGCTCTTCCGGATAGATGGA +
Preference number: 4 (lower is better)
Translates to: PPPEFVSSSTHDPGMNKNSKRVC*LFRIDG
Trigger: TCCATCTATCCGGAAGAGGCAACAAACACGTTTGCT...GTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CACACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCATCTCTGGGATAAATaGCCGAAGCTGGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: HTYTHISIHTHFRRKKSCHLWDK*PKLGLG
Trigger: ACCCAGGCCCAGCTTCGGGCATTTATCCCAGAGATG...GCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCAACCTGCTGCACTTGCTaGGCCACTGCATGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: HIHTHKYTHTFPQKEVLPTCCTC*ATACAS
Trigger: AGAAGCACATGCAGTGGCCCAGCAAGTGCAGCAGGT...TGGCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACCCTCTTCCGGATAGATaGATTAGACTCAAATACATG +
Preference number: 4 (lower is better)
Translates to: DPGMNKNWVTVSGHVPYHPLPDR*IRLKYM
Trigger: CATGTATTTGAGTCTAATCCATCTATCCGGAAGAGG...GTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACTATATTCATCTAACGTaGCTCGAAGTTTCCGAAGCA +
Preference number: 4 (lower is better)
Translates to: DPGMNKNWVTVSGHVPYHYIHLT*LEVSEA
Trigger: TGCTTCGGAAACTTCGAGCCACGTTAGATGAATATA...GTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp ATTGTTTCCACAGCGCACCTTGATTTCATACAGATAATTCCATGCGGGTTTCATGCCCGAAGCTGGGCCTaGGTCATTTTGTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: IVSTAHLDFIQIIPCGFHARSWA*VILSTE
Trigger: CTCTGTGGACAAAATGACCCAGGCCCAGCTTCGGGC...ATGAAACCCGCATGGAATTATCTGTATGAAATCAAGGTGCGCTGTGGAAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCAGCCCCCGTACCAACCTaGATAAGTGAGACAGTGCCA +
Preference number: 4 (lower is better)
Translates to: HIHTHKYTHTFPQKEVLPAPVPT*ISETVP
Trigger: TGGCACTGTCTCACTTATCCAGGTTGGTACGGGGGC...TGGCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CACACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCGATGCTTGCGTCGTCTaGATGGTCATCTCACCTCCC +
Preference number: 4 (lower is better)
Translates to: HTYTHISIHTHFRRKKSCDACVV*MVISPP
Trigger: GGGAGGTGAGATGACCATCCAGACGACGCAAGCATC...GCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp AACTATTTGGAGGTTATTTCACCACAAAGGAACATGGACTTTAAAGTCCCTGGAAACGATGCCACCGCCTaGGTGGCCTCTGATGCTTGC +
Preference number: 4 (lower is better)
Translates to: NYLEVISPQRNMDFKVPGNDATA*VASDAC
Trigger: GCAAGCATCAGAGGCCACCCAGGCGGTGGCATCGTT...TCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTGAAATAACCTCCAAATAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACAACGATGCCATAATATaGCTGTATGTCACTGTTCCA +
Preference number: 4 (lower is better)
Translates to: DPGMNKNWVTVSGHVPYHNDAII*LYVTVP
Trigger: TGGAACAGTGACATACAGCCATATTATGGCATCGTT...GTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp AACTATTTGGAGGTTATTTCACCACAAAGGAACATGGACTTTAAAGTCCCTGGACTGGGTGACTGTGTCTaGCCACGTACCCTACCACCC +
Preference number: 4 (lower is better)
Translates to: NYLEVISPQRNMDFKVPGLGDCV*PRTLPP
Trigger: GGGTGGTAGGGTACGTGGCCAGACACAGTCACCCAG...TCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTGAAATAACCTCCAAATAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCAGTTCTGTGTGGCCACTaGGAGGCAGCTTTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: HIHTHKYTHTFPQKEVLPVLCGH*EAALVK
Trigger: CTTCACCAAAGCTGCCTCCCAGTGGCCACACAGAAC...TGGCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GCTACTGGAGACTCAGGGCTTGCAGCTGAGAAAGACAGAGTTAACGGTTACCAACACCACAAAGGAACATaGACTTTAAAGTCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: ATGDSGLAAEKDRVNGYQHHKGT*TLKSLD
Trigger: GTCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTG...TTGGTAACCGTTAACTCTGTCTTTCTCAGCTGCAAGCCCTGAGTCTCCAGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACTTAGACTCAAATACATaGGGCCGTTTCCGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYLDSNT*GRFRFF
Trigger: AAAGAAACGGAAACGGCCTCATGTATTTGAGTCTAA...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACTGTGTTTGCGTTTGCTaGTCTTCAAAGGCATACAAA +
Preference number: 4 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYCVCVC*SSKAYK
Trigger: TTTGTATGCCTTTGAAGATCAGCAAACGCAAACACA...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACTGTGATGGTACAAGATaGGCTATACTATGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: PPPEFVSSSTHDPGMNKNCDGTR*AILCVA
Trigger: AGCCACACATAGTATAGCTCATCTTGTACCATCACA...GTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GTGAAATTGACAATGCAGTTTCTTCACCAATCCCAGAAAATCAAGAGTGGTGCTCATTCCCACAGGACCTaGAGCTGCCAGATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: VKLTMQFLHQSQKIKSGAHSHRT*SCQMSC
Trigger: ACAGCTCATCTGGCAGCTGCAGGTCCTGTGGGAATG...AGCACCACTCTTGATTTTCTGGGATTGGTGAAGAAACTGCATTGTCAATTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CACACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCAATGTGGCTACTGTTaGCCCCGTACCAACCTGGAT +
Preference number: 4 (lower is better)
Translates to: HTYTHISIHTHFRRKKSCQCGYC*PRTNLD
Trigger: ATCCAGGTTGGTACGGGGGCAACAGTAGCCACATTG...GCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp ATTGTTTCCACAGCGCACCTTGATTTCATACAGATAATTCCATGCGGGTTTCATGCAGTCCCTGGACCTTaGAAGCACATCTCTGACCCA +
Preference number: 4 (lower is better)
Translates to: IVSTAHLDFIQIIPCGFHAVPGP*KHISDP
Trigger: TGGGTCAGAGATGTGCTTGCAAGGTCCAGGGACTGC...ATGAAACCCGCATGGAATTATCTGTATGAAATCAAGGTGCGCTGTGGAAACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GTGAAATTGACAATGCAGTTTCTTCACCAATCCCAGAAAATCAAGAGTGGTGCTGCCCCCGTACCAACCTaGATAAGTGAGACAGTGCCA +
Preference number: 4 (lower is better)
Translates to: VKLTMQFLHQSQKIKSGAAPVPT*ISETVP
Trigger: TGGCACTGTCTCACTTATCCAGGTTGGTACGGGGGC...AGCACCACTCTTGATTTTCTGGGATTGGTGAAGAAACTGCATTGTCAATTTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CACACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCAAGCATCAGCCAATGTaGCTACTGTTGCCCCCGTAC +
Preference number: 4 (lower is better)
Translates to: HTYTHISIHTHFRRKKSCKHQPM*LLLPPY
Trigger: GTACGGGGGCAACAGTAGCCACATTGGCTGATGCTT...GCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp ATTGTTTCCACAGCGCACCTTGATTTCATACAGATAATTCCATGCGGGTTTCATGATGCTTGCGTCGTCTaGATGGTCATCTCACCTCCC +
Preference number: 4 (lower is better)
Translates to: IVSTAHLDFIQIIPCGFHDACVV*MVISPP
Trigger: GGGAGGTGAGATGACCATCCAGACGACGCAAGCATC...ATGAAACCCGCATGGAATTATCTGTATGAAATCAAGGTGCGCTGTGGAAACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CACCACAAAGGAACATGGACTTTAAAGTCCCTGGACAACTTCACAATGACGATACTGGTCACCACAGTCTaGTACATGCTCACAGGGATC +
Preference number: 4 (lower is better)
Translates to: HHKGTWTLKSLDNFTMTILVTTV*YMLTGI
Trigger: GATCCCTGTGAGCATGTACCAGACTGTGGTGACCAG...TATCGTCATTGTGAAGTTGTCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp ATTGTTTCCACAGCGCACCTTGATTTCATACAGATAATTCCATGCGGGTTTCATTGTCTGATATCCTGGTaGTCACAGGGGCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: IVSTAHLDFIQIIPCGFHCLISW*SQGPWP
Trigger: TGGCCATGGCCCCTGTGACCACCAGGATATCAGACA...ATGAAACCCGCATGGAATTATCTGTATGAAATCAAGGTGCGCTGTGGAAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGGGTGAATTATTGAACGATGCCATAATATaGCTGTATGTCACTGTTCCA +
Preference number: 4 (lower is better)
Translates to: GDCVWPRTLPPTKLGELLNDAII*LYVTVP
Trigger: TGGAACAGTGACATACAGCCATATTATGGCATCGTT...CAATAATTCACCCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp ATTGTTTCCACAGCGCACCTTGATTTCATACAGATAATTCCATGCGGGTTTCATTCTGGACCAGGCCTGTaGCTTTGTCAGTCAGGATCC +
Preference number: 4 (lower is better)
Translates to: IVSTAHLDFIQIIPCGFHSGPGL*LCQSGS
Trigger: GGATCCTGACTGACAAAGCCACAGGCCTGGTCCAGA...ATGAAACCCGCATGGAATTATCTGTATGAAATCAAGGTGCGCTGTGGAAACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311967.6
ENST00000353868.5
CDS-3UTR CCA 90 bp GTGAAATTGACAATGCAGTTTCTTCACCAATCCCAGAAAATCAAGAGTGGTGCTATGCTCACAGGGATCTaGACCAGGCCTGTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: VKLTMQFLHQSQKIKSGAMLTGI*TRPVAL
Trigger: CAAAGCCACAGGCCTGGTCCAGATCCCTGTGAGCAT...AGCACCACTCTTGATTTTCTGGGATTGGTGAAGAAACTGCATTGTCAATTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311967.6
ENST00000353868.5
CDS-3UTR CCA 90 bp CACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCATTGCATCAAGGAACATaGGCCTCCAGGAGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: HIHTHKYTHTFPQKEVLPLHQGT*ASRSPF
Trigger: GAAGGGACTCCTGGAGGCCCATGTTCCTTGATGCAA...TGGCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp AACTATTTGGAGGTTATTTCACCACAAAGGAACATGGACTTTAAAGTCCCTGGAACACCATCACACACATaGGGAGAGCTGGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: NYLEVISPQRNMDFKVPGTPSHT*GELGGG
Trigger: CCCTCCTCCCAGCTCTCCCCATGTGTGTGATGGTGT...TCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTGAAATAACCTCCAAATAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GTGAAATTGACAATGCAGTTTCTTCACCAATCCCAGAAAATCAAGAGTGGTGCTCACTTGCTGGGCCACTaGATGTGCTTCTATGGTAGC +
Preference number: 4 (lower is better)
Translates to: VKLTMQFLHQSQKIKSGAHLLGH*MCFYGS
Trigger: GCTACCATAGAAGCACATGCAGTGGCCCAGCAAGTG...AGCACCACTCTTGATTTTCTGGGATTGGTGAAGAAACTGCATTGTCAATTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CACACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCATCACTCCGGACATTTaGCCAGGGGATATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: HTYTHISIHTHFRRKKSCITPDI*PGDIFR
Trigger: CCTGAAGATATCCCCTGGGCAAATGTCCGGAGTGAT...GCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCAGCTTTTGCTCTTCTGTaGGGACATCACTCCGGACAT +
Preference number: 4 (lower is better)
Translates to: HIHTHKYTHTFPQKEVLPAFALL*GHHSGH
Trigger: ATGTCCGGAGTGATGTCCGCACAGAAGAGCAAAAGC...TGGCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CACACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCGCTTTTGCTCTTCTGTaGGGACATCACTCCGGACAT +
Preference number: 4 (lower is better)
Translates to: HTYTHISIHTHFRRKKSCAFALL*GHHSGH
Trigger: ATGTCCGGAGTGATGTCCGCACAGAAGAGCAAAAGC...GCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp AACTATTTGGAGGTTATTTCACCACAAAGGAACATGGACTTTAAAGTCCCTGGAGTGGCCTCTGATGCTTaGGTCGTCTGGATGGTCATC +
Preference number: 4 (lower is better)
Translates to: NYLEVISPQRNMDFKVPGVASDA*VVWMVI
Trigger: GATGACCATCCAGACGACGCAAGCATCAGAGGCCAC...TCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTGAAATAACCTCCAAATAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GTGAAATTGACAATGCAGTTTCTTCACCAATCCCAGAAAATCAAGAGTGGTGCTGCGACCTGCACGATCTaGCATAAAGAGGCCATTAGC +
Preference number: 4 (lower is better)
Translates to: VKLTMQFLHQSQKIKSGAATCTI*HKEAIS
Trigger: GCTAATGGCCTCTTTATGGCAGATCGTGCAGGTCGC...AGCACCACTCTTGATTTTCTGGGATTGGTGAAGAAACTGCATTGTCAATTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311967.6
ENST00000353868.5
CDS-3UTR GCA 90 bp AACTATTTGGAGGTTATTTCACCACAAAGGAACATGGACTTTAAAGTCCCTGGACAGTCAGGATCCACTTaGGACCTGCACGATCTGCCA +
Preference number: 4 (lower is better)
Translates to: NYLEVISPQRNMDFKVPGQSGST*DLHDLP
Trigger: TGGCAGATCGTGCAGGTCGCAAGTGGATCCTGACTG...TCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTGAAATAACCTCCAAATAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353868.5
CDS-3UTR CCA 90 bp ATTGTTTCCACAGCGCACCTTGATTTCATACAGATAATTCCATGCGGGTTTCATGCCATATGTTCGGTTTaGGTCACTCCGTGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: IVSTAHLDFIQIIPCGFHAICSV*VTPCSS
Trigger: GGAGGAACACGGAGTGACCCAAACCGAACATATGGC...ATGAAACCCGCATGGAATTATCTGTATGAAATCAAGGTGCGCTGTGGAAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp ATTGTTTCCACAGCGCACCTTGATTTCATACAGATAATTCCATGCGGGTTTCATCTTCAGGCCACCAGATaGGCTTGCAGCTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: IVSTAHLDFIQIIPCGFHLQATR*ACSFLS
Trigger: GGAAAGAAAGCTGCAAGCCCATCTGGTGGCCTGAAG...ATGAAACCCGCATGGAATTATCTGTATGAAATCAAGGTGCGCTGTGGAAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCAGAGCTATACTATGTGTaGCTGTGGCCTGTGTTTGCG +
Preference number: 4 (lower is better)
Translates to: HIHTHKYTHTFPQKEVLPELYYV*LWPVFA
Trigger: CGCAAACACAGGCCACAGCCACACATAGTATAGCTC...TGGCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GTGAAATTGACAATGCAGTTTCTTCACCAATCCCAGAAAATCAAGAGTGGTGCTAAGCATCAGCCAATGTaGCTACTGTTGCCCCCGTAC +
Preference number: 4 (lower is better)
Translates to: VKLTMQFLHQSQKIKSGAKHQPM*LLLPPY
Trigger: GTACGGGGGCAACAGTAGCCACATTGGCTGATGCTT...AGCACCACTCTTGATTTTCTGGGATTGGTGAAGAAACTGCATTGTCAATTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp ATTGTTTCCACAGCGCACCTTGATTTCATACAGATAATTCCATGCGGGTTTCATCTTGCGTCGTCTGGATaGTCATCTCACCTCCCTGTA +
Preference number: 4 (lower is better)
Translates to: IVSTAHLDFIQIIPCGFHLASSG*SSHLPV
Trigger: TACAGGGAGGTGAGATGACCATCCAGACGACGCAAG...ATGAAACCCGCATGGAATTATCTGTATGAAATCAAGGTGCGCTGTGGAAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CACACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCATGCTCACAGGGATCTaGACCAGGCCATTAGCATCT +
Preference number: 4 (lower is better)
Translates to: HTYTHISIHTHFRRKKSCMLTGI*TRPLAS
Trigger: AGATGCTAATGGCCTGGTCCAGATCCCTGTGAGCAT...GCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223190.8
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACAACGATGCCATAATATaGCTGTATGTCACTGTTCCA +
Preference number: 4 (lower is better)
Translates to: PPPEFVSSSTHDPGMNKNNDAII*LYVTVP
Trigger: TGGAACAGTGACATACAGCCATATTATGGCATCGTT...GTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp TTAACGGTTACCAAGAACACCCAGATAGTCAACACCTCTGAGGAGGCAAGCTGCAACGATGCCATAATATaGCTGTATGTCACTGTTCCA +
Preference number: 4 (lower is better)
Translates to: LTVTKNTQIVNTSEEASCNDAII*LYVTVP
Trigger: TGGAACAGTGACATACAGCCATATTATGGCATCGTT...GCAGCTTGCCTCCTCAGAGGTGTTGACTATCTGGGTGTTCTTGGTAACCGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp GTGAAATTGACAATGCAGTTTCTTCACCAATCCCAGAAAATCAAGAGTGGTGCTACCAACCTGGATAAGTaGGACAGTGCCATCAGGGTT +
Preference number: 4 (lower is better)
Translates to: VKLTMQFLHQSQKIKSGATNLDK*DSAIRV
Trigger: AACCCTGATGGCACTGTCTCACTTATCCAGGTTGGT...AGCACCACTCTTGATTTTCTGGGATTGGTGAAGAAACTGCATTGTCAATTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp AGAAAATTGCTCCCACGGGTGTATCCTGGTCTAGGACGATTTTTCTTTCCTTCCTTCCACAGCGCACCTTaGTTTCATACAGATAATTCC +
Preference number: 4 (lower is better)
Translates to: RKLLPRVYPGLGRFFFPSFHSAP*FHTDNS
Trigger: GGAATTATCTGTATGAAATCAAGGTGCGCTGTGGAA...GGAAGGAAAGAAAAATCGTCCTAGACCAGGATACACCCGTGGGAGCAATTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp ATTGTTTCCACAGCGCACCTTGATTTCATACAGATAATTCCATGCGGGTTTCATCTGGGCCACTGCATGTaGTTCTATGGTAGCCATATG +
Preference number: 4 (lower is better)
Translates to: IVSTAHLDFIQIIPCGFHLGHCM*FYGSHM
Trigger: CATATGGCTACCATAGAAGCACATGCAGTGGCCCAG...ATGAAACCCGCATGGAATTATCTGTATGAAATCAAGGTGCGCTGTGGAAACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTATTCTCCAAAGGTGCTaGACCAAACACTTTAAAGAC +
Preference number: 4 (lower is better)
Translates to: VSSSTHDPGMNKNWVTVSILQRC*TKHFKD
Trigger: GTCTTTAAAGTGTTTGGTGCAGCACCTTTGGAGAAT...AGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTCCTCTTCCGGATAGATaGATTAGACTCAAATACATG +
Preference number: 4 (lower is better)
Translates to: VSSSTHDPGMNKNWVTVSPLPDR*IRLKYM
Trigger: CATGTATTTGAGTCTAATCCATCTATCCGGAAGAGG...AGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CACACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCTTTGTCCACAGAGACTaGAATTCCGTCGATGGTGAG +
Preference number: 4 (lower is better)
Translates to: HTYTHISIHTHFRRKKSCFVHRD*NSVDGE
Trigger: CTCACCATCGACGGAATTCCAGTCTCTGTGGACAAA...GCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GTGAAATTGACAATGCAGTTTCTTCACCAATCCCAGAAAATCAAGAGTGGTGCTCACCTCCCTGTAACGTaGCCCAATTTTGTTCCACCT +
Preference number: 4 (lower is better)
Translates to: VKLTMQFLHQSQKIKSGAHLPVT*PNFVPP
Trigger: AGGTGGAACAAAATTGGGCCACGTTACAGGGAGGTG...AGCACCACTCTTGATTTTCTGGGATTGGTGAAGAAACTGCATTGTCAATTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CACACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCGGTATGAACAAAAACTaGGTGACTGTGTCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: HTYTHISIHTHFRRKKSCGMNKN*VTVSGH
Trigger: GTGGCCAGACACAGTCACCCAGTTTTTGTTCATACC...GCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CACCACAAAGGAACATGGACTTTAAAGTCCCTGGACAACTTCACAATGACGATACCCACGGGTGTATCCTaGTCTAGGACGATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: HHKGTWTLKSLDNFTMTIPTGVS*SRTIFL
Trigger: AAGAAAAATCGTCCTAGACCAGGATACACCCGTGGG...TATCGTCATTGTGAAGTTGTCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCATGTCACCTCATCAGCTaGTGTGGAGTTGAGTATATC +
Preference number: 4 (lower is better)
Translates to: HIHTHKYTHTFPQKEVLPCHLIS*CGVEYI
Trigger: GATATACTCAACTCCACAGCAGCTGATGAGGTGACA...TGGCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CACCACAAAGGAACATGGACTTTAAAGTCCCTGGACAACTTCACAATGACGATAAGCAAACGTGTTTGTTaGCTCTTCCGGATAGATGGA +
Preference number: 4 (lower is better)
Translates to: HHKGTWTLKSLDNFTMTISKRVC*LFRIDG
Trigger: TCCATCTATCCGGAAGAGGCAACAAACACGTTTGCT...TATCGTCATTGTGAAGTTGTCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp ATTGTTTCCACAGCGCACCTTGATTTCATACAGATAATTCCATGCGGGTTTCATCAGAGGACAATAGCTTaGTGTCCCACACGAGTAGTA +
Preference number: 4 (lower is better)
Translates to: IVSTAHLDFIQIIPCGFHQRTIA*CPTRVV
Trigger: TACTACTCGTGTGGGACAGCAAGCTATTGTCCTCTG...ATGAAACCCGCATGGAATTATCTGTATGAAATCAAGGTGCGCTGTGGAAACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GTGAAATTGACAATGCAGTTTCTTCACCAATCCCAGAAAATCAAGAGTGGTGCTTTTGTCCACAGAGACTaGAATTCCGTCGATGGTGAG +
Preference number: 4 (lower is better)
Translates to: VKLTMQFLHQSQKIKSGAFVHRD*NSVDGE
Trigger: CTCACCATCGACGGAATTCCAGTCTCTGTGGACAAA...AGCACCACTCTTGATTTTCTGGGATTGGTGAAGAAACTGCATTGTCAATTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GTGAAATTGACAATGCAGTTTCTTCACCAATCCCAGAAAATCAAGAGTGGTGCTGTACTTGAGCATCTCTaGGATAAATGCCCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: VKLTMQFLHQSQKIKSGAVLEHL*DKCPKL
Trigger: CAGCTTCGGGCATTTATCCCAGAGATGCTCAAGTAC...AGCACCACTCTTGATTTTCTGGGATTGGTGAAGAAACTGCATTGTCAATTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CTTCTTGTTCATTCCAGCGCCTCCTCTGTGAAGCTACAGACAGTAGAGAAAATTGGGTTACTAAAAGTCTaGACTACAGTCTGTGATGGT +
Preference number: 4 (lower is better)
Translates to: LLVHSSASSVKLQTVEKIGLLKV*TTVCDG
Trigger: ACCATCACAGACTGTAGTCCAGACTTTTAGTAACCC...AATTTTCTCTACTGTCTGTAGCTTCACAGAGGAGGCGCTGGAATGAACAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GTGAAATTGACAATGCAGTTTCTTCACCAATCCCAGAAAATCAAGAGTGGTGCTCCCACGGGTGTATCCTaGTCTAGGACGATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: VKLTMQFLHQSQKIKSGAPTGVS*SRTIFL
Trigger: AAGAAAAATCGTCCTAGACCAGGATACACCCGTGGG...AGCACCACTCTTGATTTTCTGGGATTGGTGAAGAAACTGCATTGTCAATTTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CACCACAAAGGAACATGGACTTTAAAGTCCCTGGACAACTTCACAATGACGATATGTGATGGTACAAGATaGGCTATACTATGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: HHKGTWTLKSLDNFTMTICDGTR*AILCVA
Trigger: AGCCACACATAGTATAGCTCATCTTGTACCATCACA...TATCGTCATTGTGAAGTTGTCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCATTCCACAGCGCACCTTaGTTTCATACAGATAATTCC +
Preference number: 4 (lower is better)
Translates to: HIHTHKYTHTFPQKEVLPFHSAP*FHTDNS
Trigger: GGAATTATCTGTATGAAATCAAGGTGCGCTGTGGAA...TGGCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp ATTGTTTCCACAGCGCACCTTGATTTCATACAGATAATTCCATGCGGGTTTCATACTTCTCTCAAAGGTTaGGCAAGACGTGGAGAATCT +
Preference number: 4 (lower is better)
Translates to: IVSTAHLDFIQIIPCGFHTSLKG*ARRGES
Trigger: AGATTCTCCACGTCTTGCTCAACCTTTGAGAGAAGT...ATGAAACCCGCATGGAATTATCTGTATGAAATCAAGGTGCGCTGTGGAAACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp GTGAAATTGACAATGCAGTTTCTTCACCAATCCCAGAAAATCAAGAGTGGTGCTACTTCTCTCAAAGGTTaGGCAAGACGTGGAGAATCT +
Preference number: 4 (lower is better)
Translates to: VKLTMQFLHQSQKIKSGATSLKG*ARRGES
Trigger: AGATTCTCCACGTCTTGCTCAACCTTTGAGAGAAGT...AGCACCACTCTTGATTTTCTGGGATTGGTGAAGAAACTGCATTGTCAATTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCAACAGAATCCATGCTCTaGTACTGGGGTTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: HIHTHKYTHTFPQKEVLPTESML*YWGFAF
Trigger: AAAAGCAAAACCCCAGTAGCAGAGCATGGATTCTGT...TGGCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp AACTATTTGGAGGTTATTTCACCACAAAGGAACATGGACTTTAAAGTCCCTGGAGTACTTGAGCATCTCTaGGATAAATGCCCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: NYLEVISPQRNMDFKVPGVLEHL*DKCPKL
Trigger: CAGCTTCGGGCATTTATCCCAGAGATGCTCAAGTAC...TCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTGAAATAACCTCCAAATAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp AACTATTTGGAGGTTATTTCACCACAAAGGAACATGGACTTTAAAGTCCCTGGATACTATGTGTGGCTGTaGCCTGTGTTTGCGTTTGCT +
Preference number: 4 (lower is better)
Translates to: NYLEVISPQRNMDFKVPGYYVWL*PVFAFA
Trigger: AGCAAACGCAAACACAGGCCACAGCCACACATAGTA...TCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTGAAATAACCTCCAAATAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CACCACAAAGGAACATGGACTTTAAAGTCCCTGGACAACTTCACAATGACGATAGGGTTACTAAAAGTCTaGACTACAGTCTGTGATGGT +
Preference number: 4 (lower is better)
Translates to: HHKGTWTLKSLDNFTMTIGLLKV*TTVCDG
Trigger: ACCATCACAGACTGTAGTCCAGACTTTTAGTAACCC...TATCGTCATTGTGAAGTTGTCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp AACTATTTGGAGGTTATTTCACCACAAAGGAACATGGACTTTAAAGTCCCTGGAGGTATGAACAAAAACTaGGTGACTGTGTCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: NYLEVISPQRNMDFKVPGGMNKN*VTVSGH
Trigger: GTGGCCAGACACAGTCACCCAGTTTTTGTTCATACC...TCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTGAAATAACCTCCAAATAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp ATTGTTTCCACAGCGCACCTTGATTTCATACAGATAATTCCATGCGGGTTTCATCACCACAAAGGAACATaGACTTTAAAGTCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: IVSTAHLDFIQIIPCGFHHHKGT*TLKSLD
Trigger: GTCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTG...ATGAAACCCGCATGGAATTATCTGTATGAAATCAAGGTGCGCTGTGGAAACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp CACACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCTGTGTTTGCGTTTGCTaGTCTTCAAAGGCATACAAA +
Preference number: 4 (lower is better)
Translates to: HTYTHISIHTHFRRKKSCCVCVC*SSKAYK
Trigger: TTTGTATGCCTTTGAAGATCAGCAAACGCAAACACA...GCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp CACCACAAAGGAACATGGACTTTAAAGTCCCTGGACAACTTCACAATGACGATAATTCTCCAAAGGTGCTaGACCAAACACTTTAAAGAC +
Preference number: 4 (lower is better)
Translates to: HHKGTWTLKSLDNFTMTIILQRC*TKHFKD
Trigger: GTCTTTAAAGTGTTTGGTGCAGCACCTTTGGAGAAT...TATCGTCATTGTGAAGTTGTCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp CACACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCTATATTCATCTAACGTaGCTCGAAGTTTCCGAAGCA +
Preference number: 4 (lower is better)
Translates to: HTYTHISIHTHFRRKKSCYIHLT*LEVSEA
Trigger: TGCTTCGGAAACTTCGAGCCACGTTAGATGAATATA...GCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp ATTGTTTCCACAGCGCACCTTGATTTCATACAGATAATTCCATGCGGGTTTCATTTAGACTCAAATACATaGGGCCGTTTCCGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: IVSTAHLDFIQIIPCGFHLDSNT*GRFRFF
Trigger: AAAGAAACGGAAACGGCCTCATGTATTTGAGTCTAA...ATGAAACCCGCATGGAATTATCTGTATGAAATCAAGGTGCGCTGTGGAAACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp GTGAAATTGACAATGCAGTTTCTTCACCAATCCCAGAAAATCAAGAGTGGTGCTCACATTCTCCAAAGGTaGTGCACCAAACACTTTAAA +
Preference number: 4 (lower is better)
Translates to: VKLTMQFLHQSQKIKSGAHILQR*CTKHFK
Trigger: TTTAAAGTGTTTGGTGCAGCACCTTTGGAGAATGTG...AGCACCACTCTTGATTTTCTGGGATTGGTGAAGAAACTGCATTGTCAATTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CCA 90 bp GTGAAATTGACAATGCAGTTTCTTCACCAATCCCAGAAAATCAAGAGTGGTGCTCCTCTTCCGGATAGATaGATTAGACTCAAATACATG +
Preference number: 4 (lower is better)
Translates to: VKLTMQFLHQSQKIKSGAPLPDR*IRLKYM
Trigger: CATGTATTTGAGTCTAATCCATCTATCCGGAAGAGG...AGCACCACTCTTGATTTTCTGGGATTGGTGAAGAAACTGCATTGTCAATTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR TCA 90 bp AACTATTTGGAGGTTATTTCACCACAAAGGAACATGGACTTTAAAGTCCCTGGAAGACTTAATTCCATTTaGTTGCACCTCTGCAAACGT +
Preference number: 4 (lower is better)
Translates to: NYLEVISPQRNMDFKVPGRLNSI*LHLCKR
Trigger: ACGTTTGCAGAGGTGCAATCAAATGGAATTAAGTCT...TCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTGAAATAACCTCCAAATAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR GCA 90 bp AACTATTTGGAGGTTATTTCACCACAAAGGAACATGGACTTTAAAGTCCCTGGACACATTCTCCAAAGGTaGTGCACCAAACACTTTAAA +
Preference number: 4 (lower is better)
Translates to: NYLEVISPQRNMDFKVPGHILQR*CTKHFK
Trigger: TTTAAAGTGTTTGGTGCAGCACCTTTGGAGAATGTG...TCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTGAAATAACCTCCAAATAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS GCA 90 bp GGAACTCAGAGCGGCTGCGCTACCGTGGGCCTGCGCCGTGGAGACTaGGACCGCGCCGGCTCCTCGCAGCCTCCTGCCACCAGCGGCAAT +
Preference number: 5 (lower is better)
Translates to: GTQSGCATVGLRRGD*DRAGSSQPPATSGN
Trigger: ATTGCCGCTGGTGGCAGGAGGCTGCGAGGAGCCGGCGCGGTCGCAGTCTCCACGGCGCAGGCCCACGGTAGCGCAGCCGCTCTGAGTTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477428.5
CDS GCA 90 bp AGTTCTCAGAGCGGCTGCGCTACCGTGGGCCTGCGCCGTGGAGACTaGGACCGCGCCGGCTCCTCGCAGCCTCCTGCCACCAGCGGCAAT +
Preference number: 5 (lower is better)
Translates to: SSQSGCATVGLRRGD*DRAGSSQPPATSGN
Trigger: ATTGCCGCTGGTGGCAGGAGGCTGCGAGGAGCCGGCGCGGTCGCAGTCTCCACGGCGCAGGCCCACGGTAGCGCAGCCGCTCTGAGAACT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393232.6
CDS CCA 90 bp CACTCCGTGTTCCTCCATGAAGTTCTCAGAGCGGCTGCGCTACCGTaGGCCTGCGCCGTGGAGACTGCGACCGCGCCGGCTCCTCGCAGC +
Preference number: 5 (lower is better)
Translates to: HSVFLHEVLRAAALP*ACAVETATAPAPRS
Trigger: GCTGCGAGGAGCCGGCGCGGTCGCAGTCTCCACGGCGCAGGCCCACGGTAGCGCAGCCGCTCTGAGAACTTCATGGAGGAACACGGAGTG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393232.6
CDS CCA 90 bp TCCGTGTTCCTCCATGAAGTTCTACTCAGAGCGGCTGCGCTACCGTaGGCCTGCGCCGTGGAGACTGCGACCGCGCCGGCTCCTCGCAGC +
Preference number: 5 (lower is better)
Translates to: SVFLHEVLLRAAALP*ACAVETATAPAPRS
Trigger: GCTGCGAGGAGCCGGCGCGGTCGCAGTCTCCACGGCGCAGGCCCACGGTAGCGCAGCCGCTCTGAGTAGAACTTCATGGAGGAACACGGA
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223190.8
ENST00000311967.6
CDS CCA 90 bp CAGGGGCCATGGCCACCTGCACTGGTCCGTTGCCCTGGGCGAGGCTaGTCACCACAGTCTGGTACATGCTCACAGGGATCTGGACCAGGC +
Preference number: 5 (lower is better)
Translates to: QGPWPPALVRCPGRG*SPQSGTCSQGSGPG
Trigger: GCCTGGTCCAGATCCCTGTGAGCATGTACCAGACTGTGGTGACCAGCCTCGCCCAGGGCAACGGACCAGTGCAGGTGGCCATGGCCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp AACACCTCTGAGGAGGCAAGCTGCTCCCGGCCTGGGCCACGAGGTTGCATCAAGACCTGCACTGGTCCGTaGCCCTGGGCGAGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: NTSEEASCSRPGPRGCIKTCTGP*PWARLV
Trigger: GACCAGCCTCGCCCAGGGCAACGGACCAGTGCAGGT...CTTGATGCAACCTCGTGGCCCAGGCCGGGAGCAGCTTGCCTCCTCAGAGGTGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS GCA 90 bp ACTGCGCTGTCTGATATCCTGGTGGTCACAGGGGCCATGGCCACCTaGACTGGTCCGTTGCCCTGGGCGAGGCTGGTCACCACAGTCTGG +
Preference number: 5 (lower is better)
Translates to: TALSDILVVTGAMAT*TGPLPWARLVTTVW
Trigger: CCAGACTGTGGTGACCAGCCTCGCCCAGGGCAACGGACCAGTGCAGGTGGCCATGGCCCCTGTGACCACCAGGATATCAGACAGCGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS GCA 90 bp TTGAACCCGGGATGTGGAAGTTGCAGAGAGCCGAGATCACACCACTaGACTCCAGCCTCAGAGCGGCTGCGCTACCGTGGGCCTGCGCCG +
Preference number: 5 (lower is better)
Translates to: LNPGCGSCREPRSHH*TPASERLRYRGPAP
Trigger: CGGCGCAGGCCCACGGTAGCGCAGCCGCTCTGAGGCTGGAGTGCAGTGGTGTGATCTCGGCTCTCTGCAACTTCCACATCCCGGGTTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454688.5
CDS CCA 90 bp CTGGTGGTCACAGGGGCCATGGCCACCTGCACTGGTCCGTTGCCCTaGGCGAGGCTGGTCACCACAGTCTGGTACATGCTCACAGGGATC +
Preference number: 5 (lower is better)
Translates to: LVVTGAMATCTGPLP*ARLVTTVWYMLTGI
Trigger: GATCCCTGTGAGCATGTACCAGACTGTGGTGACCAGCCTCGCCCAGGGCAACGGACCAGTGCAGGTGGCCATGGCCCCTGTGACCACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS GCA 90 bp GCGGCCTCTGCCAACGATGCCACCGCCTGGGTGGCCTCTGATGCTTaGGTCGTCTGGATGGTCATCTCACCTCCCTGTAACGTGGCCCAA +
Preference number: 5 (lower is better)
Translates to: AASANDATAWVASDA*VVWMVISPPCNVAQ
Trigger: TTGGGCCACGTTACAGGGAGGTGAGATGACCATCCAGACGACGCAAGCATCAGAGGCCACCCAGGCGGTGGCATCGTTGGCAGAGGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS GCA 90 bp AAGCGCCATAGTGACTGTAGCTCCCTGCTGCATCTCCTGAGAAGCTaGCACTGCGGCCTCTGCCAACGATGCCACCGCCTGGGTGGCCTC +
Preference number: 5 (lower is better)
Translates to: KRHSDCSSLLHLLRS*HCGLCQRCHRLGGL
Trigger: GAGGCCACCCAGGCGGTGGCATCGTTGGCAGAGGCCGCAGTGGCAGCTTCTCAGGAGATGCAGCAGGGAGCTACAGTCACTATGGCGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS CCA 90 bp CTGCGGTTTCCCCAGACAAGACGATCTGTCCCCCACCTTGTAAGGTaGCCTCAGCCAGGGTGGCGACAGCATGGGCGGCAGCTTCGCTGT +
Preference number: 5 (lower is better)
Translates to: LRFPQTRRSVPHLVR*PQPGWRQHGRQLRC
Trigger: ACAGCGAAGCTGCCGCCCATGCTGTCGCCACCCTGGCTGAGGCCACCTTACAAGGTGGGGGACAGATCGTCTTGTCTGGGGAAACCGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CCCGAGGAGCATCTCAGCTGGCAGACCACGCAGTCCCTGGACCTTGCAAGCACACACCACCTCCACAGCTaGGCCGTCCATGGTGACTGC +
Preference number: 5 (lower is better)
Translates to: PEEHLSWQTTQSLDLASTHHLHS*AVHGDC
Trigger: GCAGTCACCATGGACGGCCAAGCTGTGGAGGTGGTG...TGTGCTTGCAAGGTCCAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS TCA 90 bp TGTCACCACCTCCACAGCTTGGCCGTCCATGGTGACTGCGCTGTCTaGTATCCTGGTGGTCACAGGGGCCATGGCCACCTGCACTGGTCC +
Preference number: 5 (lower is better)
Translates to: CHHLHSLAVHGDCAV*YPGGHRGHGHLHWS
Trigger: GGACCAGTGCAGGTGGCCATGGCCCCTGTGACCACCAGGATATCAGACAGCGCAGTCACCATGGACGGCCAAGCTGTGGAGGTGGTGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS GCA 90 bp ATATCCTGGTGGTCACAGGGGCCATGGCCACCTGCACTGGTCCGTTaGCCTGGGCGAGGCTGGTCACCACAGTCTGGTACATGCTCACAG +
Preference number: 5 (lower is better)
Translates to: ISWWSQGPWPPALVR*PGRGWSPQSGTCSQ
Trigger: CTGTGAGCATGTACCAGACTGTGGTGACCAGCCTCGCCCAGGGCAACGGACCAGTGCAGGTGGCCATGGCCCCTGTGACCACCAGGATAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS TCA 90 bp TCGCTGTTAAGCGCCATAGTGACTGTAGCTCCCTGCTGCATCTCCTaGGAAGCTGCCACTGCGGCCTCTGCCAACGATGCCACCGCCTGG +
Preference number: 5 (lower is better)
Translates to: SLLSAIVTVAPCCIS*EAATAASANDATAW
Trigger: CCAGGCGGTGGCATCGTTGGCAGAGGCCGCAGTGGCAGCTTCTCAGGAGATGCAGCAGGGAGCTACAGTCACTATGGCGCTTAACAGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS GCA 90 bp CTGGTCCGTTGCCCTGGGCGAGGCTGGTCACCACAGTCTGGTACATaGTCACAGGGATCTGGACCAGGCCTGTGGCTTTGTCAGTCAGGA +
Preference number: 5 (lower is better)
Translates to: LVRCPGRGWSPQSGT*SQGSGPGLWLCQSG
Trigger: TCCTGACTGACAAAGCCACAGGCCTGGTCCAGATCCCTGTGAGCATGTACCAGACTGTGGTGACCAGCCTCGCCCAGGGCAACGGACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311967.6
ENST00000353868.5
CDS CCA 90 bp ACCTGCACTGGTCCGTTGCCCTGGGCGAGGCTGGTCACCACAGTCTaGTACATGCTCACAGGGATCTGGACCAGGCCTGTGGCTTTGTCA +
Preference number: 5 (lower is better)
Translates to: TCTGPLPWARLVTTV*YMLTGIWTRPVALS
Trigger: TGACAAAGCCACAGGCCTGGTCCAGATCCCTGTGAGCATGTACCAGACTGTGGTGACCAGCCTCGCCCAGGGCAACGGACCAGTGCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311967.6
ENST00000353868.5
CDS-3UTR CAA 90 bp GGTGTCCCTTCTTCCCTTCCGCGTACTGACCGGGCCCAACCAAGCTTAGCTTCCGGCCACCAGATGGGCTaGCAGCTTTCTTTCCCCCAG +
Preference number: 5 (lower is better)
Translates to: GVPSSLPRTDRAQPSLASGHQMG*QLSFPQ
Trigger: CTGGGGGAAAGAAAGCTGCAAGCCCATCTGGTGGCC...GGAAGCTAAGCTTGGTTGGGCCCGGTCAGTACGCGGAAGGGAAGAAGGGACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GCCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCGGCCACCAGATGGGCTaGCAGCTTTCTTTCCCCCAG +
Preference number: 5 (lower is better)
Translates to: ARELSRHSSACGKVSTWAGHQMG*QLSFPQ
Trigger: CTGGGGGAAAGAAAGCTGCAAGCCCATCTGGTGGCC...GGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS CCA 90 bp ACCTGCACTGGTCCGTTGCCCTGGGCGAGGCTGGTCACCACAGTCTaGTACATGCTCACAGGGATCTGGACCAGGCCATTAGCATCTTGG +
Preference number: 5 (lower is better)
Translates to: TCTGPLPWARLVTTV*YMLTGIWTRPLASW
Trigger: CCAAGATGCTAATGGCCTGGTCCAGATCCCTGTGAGCATGTACCAGACTGTGGTGACCAGCCTCGCCCAGGGCAACGGACCAGTGCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223190.8
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GTCCCTGGACCTTGCAAGCACATCTCTGACCCACCCCATGCTGGAGCCTCTTTCATGGACCTGCTGCACTaGCTGGGCCACTGCATGTGC +
Preference number: 5 (lower is better)
Translates to: VPGPCKHISDPPHAGASFMDLLH*LGHCMC
Trigger: GCACATGCAGTGGCCCAGCAAGTGCAGCAGGTCCAT...GAAAGAGGCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAAGGTCCAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GCCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCCCAATGTGGCTACTGTaGCCCCCGTACCAACCTGGA +
Preference number: 5 (lower is better)
Translates to: ARELSRHSSACGKVSTWAPMWLL*PPYQPG
Trigger: TCCAGGTTGGTACGGGGGCAACAGTAGCCACATTGG...GGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACCCAACCTGCACTGGTCCGTaGCCCTGGGCGAGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: PGMNKNWVTVSGHVPYHPTCTGP*PWARLV
Trigger: GACCAGCCTCGCCCAGGGCAACGGACCAGTGCAGGT...TGGGTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GGTGAAGGGCATGGTCACCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCCACCACCTCCACAGCTaGGCCGTCCATGGTGACTGC +
Preference number: 5 (lower is better)
Translates to: GEGHGHLRLSLSVAQRMTHHLHS*AVHGDC
Trigger: GCAGTCACCATGGACGGCCAAGCTGTGGAGGTGGTG...GGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTGACCATGCCCTTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCACACTGGGAGGCAGCTTaGGTGAAGGGCATGGTCACC +
Preference number: 5 (lower is better)
Translates to: PGSFQDIHLPVARSAPGPHWEAA*VKGMVT
Trigger: GGTGACCATGCCCTTCACCAAAGCTGCCTCCCAGTG...TGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS TCA 90 bp GTCCACAGAGACTGGAATTCCGTCGATGGTGAGAGGCGGCAGTTCTaGGTTAACCTCCTGTGGCGCAGGGGCGTGTTCTGCCAGAGCAGA +
Preference number: 5 (lower is better)
Translates to: VHRDWNSVDGERRQF*VNLLWRRGVFCQSR
Trigger: TCTGCTCTGGCAGAACACGCCCCTGCGCCACAGGAGGTTAACTCAGAACTGCCGCCTCTCACCATCGACGGAATTCCAGTCTCTGTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
ENST00000454688.5
CDS CCA 90 bp GCCAACGATGCCACCGCCTGGGTGGCCTCTGATGCTTGCGTCGTCTaGATGGTCATCTCACCTCCCTGTAACGTGGCCCAATTTTGTTCC +
Preference number: 5 (lower is better)
Translates to: ANDATAWVASDACVV*MVISPPCNVAQFCS
Trigger: GGAACAAAATTGGGCCACGTTACAGGGAGGTGAGATGACCATCCAGACGACGCAAGCATCAGAGGCCACCCAGGCGGTGGCATCGTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CCCGAGGAGCATCTCAGCTGGCAGACCACGCAGTCCCTGGACCTTGCAAGCACACATCACTCCGGACATTaGCCCAGGGGATATCTTCAG +
Preference number: 5 (lower is better)
Translates to: PEEHLSWQTTQSLDLASTHHSGH*PRGYLQ
Trigger: CTGAAGATATCCCCTGGGCAAATGTCCGGAGTGATG...TGTGCTTGCAAGGTCCAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCCAATGTGGCTACTGTaGCCCCCGTACCAACCTGGA +
Preference number: 5 (lower is better)
Translates to: PGAFKTFICLWQGQHLGQPMWLL*PPYQPG
Trigger: TCCAGGTTGGTACGGGGGCAACAGTAGCCACATTGG...CTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp AACACCTCTGAGGAGGCAAGCTGCTCCCGGCCTGGGCCACGAGGTTGCATCAAGCAGGCCATTAGCATCTaGGACTCCAGTAAGTGCTCC +
Preference number: 5 (lower is better)
Translates to: NTSEEASCSRPGPRGCIKQAISI*DSSKCS
Trigger: GGAGCACTTACTGGAGTCCAAGATGCTAATGGCCTG...CTTGATGCAACCTCGTGGCCCAGGCCGGGAGCAGCTTGCCTCCTCAGAGGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GCTTCCAAGATCACACAAGATCAGGGGCGTTCAGGGTGCTGTGGCCACAGACCACACTGGGAGGCAGCTTaGGTGAAGGGCATGGTCACC +
Preference number: 5 (lower is better)
Translates to: ASKITQDQGRSGCCGHRPHWEAA*VKGMVT
Trigger: GGTGACCATGCCCTTCACCAAAGCTGCCTCCCAGTG...TGGTCTGTGGCCACAGCACCCTGAACGCCCCTGATCTTGTGTGATCTTGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GGTGTCCCTTCTTCCCTTCCGCGTACTGACCGGGCCCAACCAAGCTTAGCTTCCCTGGAGACTCAGGGCTaGCAGCTGAGAAAGACAGAG +
Preference number: 5 (lower is better)
Translates to: GVPSSLPRTDRAQPSLASLETQG*QLRKTE
Trigger: CTCTGTCTTTCTCAGCTGCAAGCCCTGAGTCTCCAG...GGAAGCTAAGCTTGGTTGGGCCCGGTCAGTACGCGGAAGGGAAGAAGGGACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS GCA 90 bp CACAGGGATCTGGACCAGGCCATTAGCATCTTGGACTCCAGTAAGTaGTCCGACGGCTGCTGCGGTTTCCCCAGACAAGACGATCTGTCC +
Preference number: 5 (lower is better)
Translates to: HRDLDQAISILDSSK*SDGCCGFPRQDDLS
Trigger: GGACAGATCGTCTTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAAGATGCTAATGGCCTGGTCCAGATCCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223190.8
ENST00000393230.6
ENST00000393232.6
CDS CCA 90 bp ACGATGCCACCGCCTGGGTGGCCTCTGATGCTTGCGTCGTCTGGATaGTCATCTCACCTCCCTGTAACGTGGCCCAATTTTGTTCCACCT +
Preference number: 5 (lower is better)
Translates to: TMPPPGWPLMLASSG*SSHLPVTWPNFVPP
Trigger: AGGTGGAACAAAATTGGGCCACGTTACAGGGAGGTGAGATGACCATCCAGACGACGCAAGCATCAGAGGCCACCCAGGCGGTGGCATCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CTTTCCTCAGGTGAGTCCAGCAGGGAGAGTTCTGTGTGGCCACTGGGAGGCAGCAGCCATATGTTCGGTTaGGGTCACTCCGTGTTCCTC +
Preference number: 5 (lower is better)
Translates to: LSSGESSRESSVWPLGGSSHMFG*GHSVFL
Trigger: GAGGAACACGGAGTGACCCAAACCGAACATATGGCT...GCTGCCTCCCAGTGGCCACACAGAACTCTCCCTGCTGGACTCACCTGAGGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CCCGAGGAGCATCTCAGCTGGCAGACCACGCAGTCCCTGGACCTTGCAAGCACACCGAAGCAAACGTGTTaGTTGCCTCTTCCGGATAGA +
Preference number: 5 (lower is better)
Translates to: PEEHLSWQTTQSLDLASTPKQTC*LPLPDR
Trigger: TCTATCCGGAAGAGGCAACAAACACGTTTGCTTCGG...TGTGCTTGCAAGGTCCAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CCCGAGGAGCATCTCAGCTGGCAGACCACGCAGTCCCTGGACCTTGCAAGCACATGGGCCTGGGTCATTTaGTCCACAGAGACTGGAATT +
Preference number: 5 (lower is better)
Translates to: PEEHLSWQTTQSLDLASTWAWVI*STETGI
Trigger: AATTCCAGTCTCTGTGGACAAAATGACCCAGGCCCA...TGTGCTTGCAAGGTCCAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GCCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCGGCAGAATAATTCACTaGGGCAACGGTGACCGTGGT +
Preference number: 5 (lower is better)
Translates to: ARELSRHSSACGKVSTWAGRIIH*GNGDRG
Trigger: ACCACGGTCACCGTTGCCCAAGTGAATTATTCTGCC...GGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACACCTGCACTGGTCCGTaGCCCTGGGCGAGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: PPPEFVSSSTHDPGMNKNTCTGP*PWARLV
Trigger: GACCAGCCTCGCCCAGGGCAACGGACCAGTGCAGGT...GTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACCACCACCTCCACAGCTaGGCCGTCCATGGTGACTGC +
Preference number: 5 (lower is better)
Translates to: DPGMNKNWVTVSGHVPYHHHLHS*AVHGDC
Trigger: GCAGTCACCATGGACGGCCAAGCTGTGGAGGTGGTG...GTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCACACCTCCGCCTGAGTTaGTCAGTAGCTCAACGCATG +
Preference number: 5 (lower is better)
Translates to: PGSFQDIHLPVARSAPGPHLRLS*SVAQRM
Trigger: CATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTG...TGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCCACCTCCGCCTGAGTTaGTCAGTAGCTCAACGCATG +
Preference number: 5 (lower is better)
Translates to: RELSRHSSACGKVSTWASHLRLS*SVAQRM
Trigger: CATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTG...GCTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GTCCCTGGACCTTGCAAGCACATCTCTGACCCACCCCATGCTGGAGCCTCTTTCCTGGAGACTCAGGGCTaGCAGCTGAGAAAGACAGAG +
Preference number: 5 (lower is better)
Translates to: VPGPCKHISDPPHAGASFLETQG*QLRKTE
Trigger: CTCTGTCTTTCTCAGCTGCAAGCCCTGAGTCTCCAG...GAAAGAGGCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAAGGTCCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp AACACCTCTGAGGAGGCAAGCTGCTCCCGGCCTGGGCCACGAGGTTGCATCAAGTCAGCTGCTGTGGAGTaGAGTATATCTGAGTCATCG +
Preference number: 5 (lower is better)
Translates to: NTSEEASCSRPGPRGCIKSAAVE*SISESS
Trigger: CGATGACTCAGATATACTCAACTCCACAGCAGCTGA...CTTGATGCAACCTCGTGGCCCAGGCCGGGAGCAGCTTGCCTCCTCAGAGGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CCCGAGGAGCATCTCAGCTGGCAGACCACGCAGTCCCTGGACCTTGCAAGCACAAAGCAAACGTGTTTGTaGCCTCTTCCGGATAGATGG +
Preference number: 5 (lower is better)
Translates to: PEEHLSWQTTQSLDLASTKQTCL*PLPDRW
Trigger: CCATCTATCCGGAAGAGGCAACAAACACGTTTGCTT...TGTGCTTGCAAGGTCCAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CTTTCCTCAGGTGAGTCCAGCAGGGAGAGTTCTGTGTGGCCACTGGGAGGCAGCCCGAAGCAAACGTGTTaGTTGCCTCTTCCGGATAGA +
Preference number: 5 (lower is better)
Translates to: LSSGESSRESSVWPLGGSPKQTC*LPLPDR
Trigger: TCTATCCGGAAGAGGCAACAAACACGTTTGCTTCGG...GCTGCCTCCCAGTGGCCACACAGAACTCTCCCTGCTGGACTCACCTGAGGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CCCGAGGAGCATCTCAGCTGGCAGACCACGCAGTCCCTGGACCTTGCAAGCACATCCAGGATCATGCTCTaGTACTTACGCACCACATTC +
Preference number: 5 (lower is better)
Translates to: PEEHLSWQTTQSLDLASTSRIML*YLRTTF
Trigger: GAATGTGGTGCGTAAGTACAAGAGCATGATCCTGGA...TGTGCTTGCAAGGTCCAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GGTGTCCCTTCTTCCCTTCCGCGTACTGACCGGGCCCAACCAAGCTTAGCTTCCTGGGCCTGGGTCATTTaGTCCACAGAGACTGGAATT +
Preference number: 5 (lower is better)
Translates to: GVPSSLPRTDRAQPSLASWAWVI*STETGI
Trigger: AATTCCAGTCTCTGTGGACAAAATGACCCAGGCCCA...GGAAGCTAAGCTTGGTTGGGCCCGGTCAGTACGCGGAAGGGAAGAAGGGACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACGGCCACCAGATGGGCTaGCAGCTTTCTTTCCCCCAG +
Preference number: 5 (lower is better)
Translates to: DPGMNKNWVTVSGHVPYHGHQMG*QLSFPQ
Trigger: CTGGGGGAAAGAAAGCTGCAAGCCCATCTGGTGGCC...GTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GTCCCTGGACCTTGCAAGCACATCTCTGACCCACCCCATGCTGGAGCCTCTTTCGGCAGAATAATTCACTaGGGCAACGGTGACCGTGGT +
Preference number: 5 (lower is better)
Translates to: VPGPCKHISDPPHAGASFGRIIH*GNGDRG
Trigger: ACCACGGTCACCGTTGCCCAAGTGAATTATTCTGCC...GAAAGAGGCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAAGGTCCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACCCACACTGGGAGGCAGCTTaGGTGAAGGGCATGGTCACC +
Preference number: 5 (lower is better)
Translates to: PGMNKNWVTVSGHVPYHPHWEAA*VKGMVT
Trigger: GGTGACCATGCCCTTCACCAAAGCTGCCTCCCAGTG...TGGGTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GGTGAAGGGCATGGTCACCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCAGCCATATGTTCGGTTaGGGTCACTCCGTGTTCCTC +
Preference number: 5 (lower is better)
Translates to: GEGHGHLRLSLSVAQRMTSHMFG*GHSVFL
Trigger: GAGGAACACGGAGTGACCCAAACCGAACATATGGCT...GGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTGACCATGCCCTTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACATGGACCTGCTGCACTaGCTGGGCCACTGCATGTGC +
Preference number: 5 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYMDLLH*LGHCMC
Trigger: GCACATGCAGTGGCCCAGCAAGTGCAGCAGGTCCAT...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGCCCGAAGCAAACGTGTTaGTTGCCTCTTCCGGATAGA +
Preference number: 5 (lower is better)
Translates to: RELSRHSSACGKVSTWASPKQTC*LPLPDR
Trigger: TCTATCCGGAAGAGGCAACAAACACGTTTGCTTCGG...GCTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CTTTCCTCAGGTGAGTCCAGCAGGGAGAGTTCTGTGTGGCCACTGGGAGGCAGCTCCAGGATCATGCTCTaGTACTTACGCACCACATTC +
Preference number: 5 (lower is better)
Translates to: LSSGESSRESSVWPLGGSSRIML*YLRTTF
Trigger: GAATGTGGTGCGTAAGTACAAGAGCATGATCCTGGA...GCTGCCTCCCAGTGGCCACACAGAACTCTCCCTGCTGGACTCACCTGAGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GTCCCTGGACCTTGCAAGCACATCTCTGACCCACCCCATGCTGGAGCCTCTTTCTGGGCCTGGGTCATTTaGTCCACAGAGACTGGAATT +
Preference number: 5 (lower is better)
Translates to: VPGPCKHISDPPHAGASFWAWVI*STETGI
Trigger: AATTCCAGTCTCTGTGGACAAAATGACCCAGGCCCA...GAAAGAGGCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAAGGTCCAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGGGTGAATTATTGGGCCACCAGATGGGCTaGCAGCTTTCTTTCCCCCAG +
Preference number: 5 (lower is better)
Translates to: GDCVWPRTLPPTKLGELLGHQMG*QLSFPQ
Trigger: CTGGGGGAAAGAAAGCTGCAAGCCCATCTGGTGGCC...CAATAATTCACCCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GGGAGGAGGGAGGAGGAGCTGTCCCTGTACTCAAGGTTCAGAGATTTGGCCTGTCATCACTCCGGACATTaGCCCAGGGGATATCTTCAG +
Preference number: 5 (lower is better)
Translates to: GRREEELSLYSRFRDLACHHSGH*PRGYLQ
Trigger: CTGAAGATATCCCCTGGGCAAATGTCCGGAGTGATG...ACAGGCCAAATCTCTGAACCTTGAGTACAGGGACAGCTCCTCCTCCCTCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GGTGTCCCTTCTTCCCTTCCGCGTACTGACCGGGCCCAACCAAGCTTAGCTTCCGGCCTGTGTTTGCGTTaGCTGATCTTCAAAGGCATA +
Preference number: 5 (lower is better)
Translates to: GVPSSLPRTDRAQPSLASGLCLR*LIFKGI
Trigger: TATGCCTTTGAAGATCAGCAAACGCAAACACAGGCC...GGAAGCTAAGCTTGGTTGGGCCCGGTCAGTACGCGGAAGGGAAGAAGGGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACCCAATGTGGCTACTGTaGCCCCCGTACCAACCTGGA +
Preference number: 5 (lower is better)
Translates to: DPGMNKNWVTVSGHVPYHPMWLL*PPYQPG
Trigger: TCCAGGTTGGTACGGGGGCAACAGTAGCCACATTGG...GTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACCCACCAATGTGGCTACTGTaGCCCCCGTACCAACCTGGA +
Preference number: 5 (lower is better)
Translates to: PGMNKNWVTVSGHVPYHPPMWLL*PPYQPG
Trigger: TCCAGGTTGGTACGGGGGCAACAGTAGCCACATTGG...TGGGTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GGTGAAGGGCATGGTCACCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCGGCAGAATAATTCACTaGGGCAACGGTGACCGTGGT +
Preference number: 5 (lower is better)
Translates to: GEGHGHLRLSLSVAQRMTGRIIH*GNGDRG
Trigger: ACCACGGTCACCGTTGCCCAAGTGAATTATTCTGCC...GGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTGACCATGCCCTTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GGTGAAGGGCATGGTCACCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCCAGGCCATTAGCATCTaGGACTCCAGTAAGTGCTCC +
Preference number: 5 (lower is better)
Translates to: GEGHGHLRLSLSVAQRMTQAISI*DSSKCS
Trigger: GGAGCACTTACTGGAGTCCAAGATGCTAATGGCCTG...GGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTGACCATGCCCTTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223190.8
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACCACCACCTCCACAGCTaGGCCGTCCATGGTGACTGC +
Preference number: 5 (lower is better)
Translates to: PPPEFVSSSTHDPGMNKNHHLHS*AVHGDC
Trigger: GCAGTCACCATGGACGGCCAAGCTGTGGAGGTGGTG...GTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CCCGAGGAGCATCTCAGCTGGCAGACCACGCAGTCCCTGGACCTTGCAAGCACAAAACTGGGTGAATTATaGTTTCCACAGCGCACCTTG +
Preference number: 5 (lower is better)
Translates to: PEEHLSWQTTQSLDLASTKLGEL*FPQRTL
Trigger: CAAGGTGCGCTGTGGAAACAATAATTCACCCAGTTT...TGTGCTTGCAAGGTCCAGGGACTGCGTGGTCTGCCAGCTGAGATGCTCCTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACTGGGAGGCAGCTTaGGTGAAGGGCATGGTCACC +
Preference number: 5 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYHWEAA*VKGMVT
Trigger: GGTGACCATGCCCTTCACCAAAGCTGCCTCCCAGTG...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS TCA 90 bp TGGGAAAAGACTGAGAAGTCAGGAGGGTTGGTCAGCTGCATCCACTaGAGATTCCATGTTGCTGGTGGAAGTCTCCCCCTCCTGCCACTG +
Preference number: 5 (lower is better)
Translates to: WEKTEKSGGLVSCIH*RFHVAGGSLPLLPL
Trigger: CAGTGGCAGGAGGGGGAGACTTCCACCAGCAACATGGAATCTTCAGTGGATGCAGCTGACCAACCCTCCTGACTTCTCAGTCTTTTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477428.5
CDS GCA 90 bp CTCGGTGTAAGTAGCCACATGGACCTGCTGCACTTGCTGGGCCACTaGATGTGCTTCTATGGTAGCCATATGTTCGGTTTGGGTCACTCC +
Preference number: 5 (lower is better)
Translates to: LGVSSHMDLLHLLGH*MCFYGSHMFGLGHS
Trigger: GGAGTGACCCAAACCGAACATATGGCTACCATAGAAGCACATGCAGTGGCCCAGCAAGTGCAGCAGGTCCATGTGGCTACTTACACCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
ENST00000454688.5
CDS GCA 90 bp TGGATTAGACTCAAATACATGAGGCCGTTTCCGTTTCTTTCCTGTTaGCACAGCAGCAGCAGCGGCCATTCCCACAGGACCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: WIRLKYMRPFPFLSC*HSSSSGHSHRTCSC
Trigger: GCAGCTGCAGGTCCTGTGGGAATGGCCGCTGCTGCTGCTGTGGCAACAGGAAAGAAACGGAAACGGCCTCATGTATTTGAGTCTAATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
ENST00000454688.5
CDS GCA 90 bp AACCCTCTGCTTTTGCTCTTCTGTGCGGACATCACTCCGGACATTTaGCCAGGGGATATCTTCAGGCCACCAGATGGGCTTGCAGCTTTC +
Preference number: 5 (lower is better)
Translates to: NPLLLLFCADITPDI*PGDIFRPPDGLAAF
Trigger: GAAAGCTGCAAGCCCATCTGGTGGCCTGAAGATATCCCCTGGGCAAATGTCCGGAGTGATGTCCGCACAGAAGAGCAAAAGCAGAGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS GCA 90 bp ACGATCTGCCATAAAGAGGCCATTAGCATCTTGGACTCCAGTAAGTaGTCCGACGGCTGCTGCGGTTTCCCCAGACAAGACGATCTGTCC +
Preference number: 5 (lower is better)
Translates to: TICHKEAISILDSSK*SDGCCGFPRQDDLS
Trigger: GGACAGATCGTCTTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAAGATGCTAATGGCCTCTTTATGGCAGATCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311967.6
ENST00000353868.5
CDS GCA 90 bp CTGGACCAGGCCTGTGGCTTTGTCAGTCAGGATCCACTTGCGACCTaGACGATCTGCCATAAAGAGGCCATTAGCATCTTGGACTCCAGT +
Preference number: 5 (lower is better)
Translates to: LDQACGFVSQDPLAT*TICHKEAISILDSS
Trigger: ACTGGAGTCCAAGATGCTAATGGCCTCTTTATGGCAGATCGTGCAGGTCGCAAGTGGATCCTGACTGACAAAGCCACAGGCCTGGTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311967.6
ENST00000353868.5
CDS GCA 90 bp GAAGTCAGGAGGGTTGGTCAGCTGCATCCACTGAAGATTCCATGTTaGTGGTGGAAGTCTCCCCCTCCTGCCACTGGTGAGAAAAATGGC +
Preference number: 5 (lower is better)
Translates to: EVRRVGQLHPLKIPC*WWKSPPPATGEKNG
Trigger: GCCATTTTTCTCACCAGTGGCAGGAGGGGGAGACTTCCACCAGCAACATGGAATCTTCAGTGGATGCAGCTGACCAACCCTCCTGACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000477428.5
CDS CCA 90 bp AGGAGGGTTGGTCAGCTGCATCCACTGAAGATTCCATGTTGCTGGTaGAAGTCTCCCCCTCCTGCCACTGGTGAGAAAAATGGCTCAGAC +
Preference number: 5 (lower is better)
Translates to: RRVGQLHPLKIPCCW*KSPPPATGEKNGSD
Trigger: GTCTGAGCCATTTTTCTCACCAGTGGCAGGAGGGGGAGACTTCCACCAGCAACATGGAATCTTCAGTGGATGCAGCTGACCAACCCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000477428.5
CDS-3UTR CAA 90 bp GCTACTGGAGACTCAGGGCTTGCAGCTGAGAAAGACAGAGTTAACGGTTACCAAATGGACCTGCTGCACTaGCTGGGCCACTGCATGTGC +
Preference number: 5 (lower is better)
Translates to: ATGDSGLAAEKDRVNGYQMDLLH*LGHCMC
Trigger: GCACATGCAGTGGCCCAGCAAGTGCAGCAGGTCCAT...TTGGTAACCGTTAACTCTGTCTTTCTCAGCTGCAAGCCCTGAGTCTCCAGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GTCCCTGGACCTTGCAAGCACATCTCTGACCCACCCCATGCTGGAGCCTCTTTCTCAGCTGCTGTGGAGTaGAGTATATCTGAGTCATCG +
Preference number: 5 (lower is better)
Translates to: VPGPCKHISDPPHAGASFSAAVE*SISESS
Trigger: CGATGACTCAGATATACTCAACTCCACAGCAGCTGA...GAAAGAGGCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAAGGTCCAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GTCCCTGGACCTTGCAAGCACATCTCTGACCCACCCCATGCTGGAGCCTCTTTCAAGCAAACGTGTTTGTaGCCTCTTCCGGATAGATGG +
Preference number: 5 (lower is better)
Translates to: VPGPCKHISDPPHAGASFKQTCL*PLPDRW
Trigger: CCATCTATCCGGAAGAGGCAACAAACACGTTTGCTT...GAAAGAGGCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAAGGTCCAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GTCCCTGGACCTTGCAAGCACATCTCTGACCCACCCCATGCTGGAGCCTCTTTCTCCAGGATCATGCTCTaGTACTTACGCACCACATTC +
Preference number: 5 (lower is better)
Translates to: VPGPCKHISDPPHAGASFSRIML*YLRTTF
Trigger: GAATGTGGTGCGTAAGTACAAGAGCATGATCCTGGA...GAAAGAGGCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGCAAGGTCCAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GGTGAAGGGCATGGTCACCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCTGGGCCTGGGTCATTTaGTCCACAGAGACTGGAATT +
Preference number: 5 (lower is better)
Translates to: GEGHGHLRLSLSVAQRMTWAWVI*STETGI
Trigger: AATTCCAGTCTCTGTGGACAAAATGACCCAGGCCCA...GGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTGACCATGCCCTTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCAGGGCCTGTGTTTGCGTTaGCTGATCTTCAAAGGCATA +
Preference number: 5 (lower is better)
Translates to: PGAFKTFICLWQGQHLGQGLCLR*LIFKGI
Trigger: TATGCCTTTGAAGATCAGCAAACGCAAACACAGGCC...CTGGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCCAATGTGGCTACTGTaGCCCCCGTACCAACCTGGA +
Preference number: 5 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYPMWLL*PPYQPG
Trigger: TCCAGGTTGGTACGGGGGCAACAGTAGCCACATTGG...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp AAGCACACTTACACGCACGCACTCCTCAAACCCCTAATACTTCGGTTACCTTCACACCACCTCCACAGCTaGGCCGTCCATGGTGACTGC +
Preference number: 5 (lower is better)
Translates to: KHTYTHALLKPLILRLPSHHLHS*AVHGDC
Trigger: GCAGTCACCATGGACGGCCAAGCTGTGGAGGTGGTG...TGAAGGTAACCGAAGTATTAGGGGTTTGAGGAGTGCGTGCGTGTAAGTGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACCACCTCCGCCTGAGTTaGTCAGTAGCTCAACGCATG +
Preference number: 5 (lower is better)
Translates to: DPGMNKNWVTVSGHVPYHHLRLS*SVAQRM
Trigger: CATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTG...GTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GGGAGGAGGGAGGAGGAGCTGTCCCTGTACTCAAGGTTCAGAGATTTGGCCTGTACCAGATGTCTCTTCTaGTTCATTCCAGCGCCTCCT +
Preference number: 5 (lower is better)
Translates to: GRREEELSLYSRFRDLACTRCLF*FIPAPP
Trigger: AGGAGGCGCTGGAATGAACAAGAAGAGACATCTGGT...ACAGGCCAAATCTCTGAACCTTGAGTACAGGGACAGCTCCTCCTCCCTCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS TCA 90 bp GGCAGAATAATTCACTTGGGCAACGGTGACCGTGGTTGGCAATTCTaGAGCATCAGCCAATGTGGCTACTGTTGCCCCCGTACCAACCTG +
Preference number: 5 (lower is better)
Translates to: GRIIHLGNGDRGWQF*SISQCGYCCPRTNL
Trigger: CAGGTTGGTACGGGGGCAACAGTAGCCACATTGGCTGATGCTTCAGAATTGCCAACCACGGTCACCGTTGCCCAAGTGAATTATTCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS TCA 90 bp CCACCTCTCCATCAGCCACGGCAGAATAATTCACTTGGGCAACGGTaGCCGTGGTTGGCAATTCTGAAGCATCAGCCAATGTGGCTACTG +
Preference number: 5 (lower is better)
Translates to: PPLHQPRQNNSLGQR*PWLAILKHQPMWLL
Trigger: CAGTAGCCACATTGGCTGATGCTTCAGAATTGCCAACCACGGTCACCGTTGCCCAAGTGAATTATTCTGCCGTGGCTGATGGAGAGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACCCAAGCCATATGTTCGGTTaGGGTCACTCCGTGTTCCTC +
Preference number: 5 (lower is better)
Translates to: PGMNKNWVTVSGHVPYHPSHMFG*GHSVFL
Trigger: GAGGAACACGGAGTGACCCAAACCGAACATATGGCT...TGGGTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTATGGACCTGCTGCACTaGCTGGGCCACTGCATGTGC +
Preference number: 5 (lower is better)
Translates to: VSSSTHDPGMNKNWVTVSMDLLH*LGHCMC
Trigger: GCACATGCAGTGGCCCAGCAAGTGCAGCAGGTCCAT...AGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp ACGGTTACCAAGAACACCCAGATAGTCAACACCTCTGAGGAGGCAAGCTGCTCCCATCACTCCGGACATTaGCCCAGGGGATATCTTCAG +
Preference number: 5 (lower is better)
Translates to: TVTKNTQIVNTSEEASCSHHSGH*PRGYLQ
Trigger: CTGAAGATATCCCCTGGGCAAATGTCCGGAGTGATG...GGAGCAGCTTGCCTCCTCAGAGGTGTTGACTATCTGGGTGTTCTTGGTAACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CACACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCACCTGCACTGGTCCGTaGCCCTGGGCGAGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: HTYTHISIHTHFRRKKSCTCTGP*PWARLV
Trigger: GACCAGCCTCGCCCAGGGCAACGGACCAGTGCAGGT...GCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GGTGTCCCTTCTTCCCTTCCGCGTACTGACCGGGCCCAACCAAGCTTAGCTTCCCAGAGATTTGGCCTGTaGAAAAGTCAGGTGAATTCA +
Preference number: 5 (lower is better)
Translates to: GVPSSLPRTDRAQPSLASQRFGL*KSQVNS
Trigger: TGAATTCACCTGACTTTTCAACAGGCCAAATCTCTG...GGAAGCTAAGCTTGGTTGGGCCCGGTCAGTACGCGGAAGGGAAGAAGGGACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS TCA 90 bp CTGCAGCTGCCAGATGAGCTGTCACCTCATCAGCTGCTGTGGAGTTaGGTATATCTGAGTCATCGTAAGAGGTGTCCTCGGGAGAAGAAG +
Preference number: 5 (lower is better)
Translates to: LQLPDELSPHQLLWS*VYLSHRKRCPREKK
Trigger: CTTCTTCTCCCGAGGACACCTCTTACGATGACTCAGATATACTCAACTCCACAGCAGCTGATGAGGTGACAGCTCATCTGGCAGCTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
ENST00000454688.5
CDS CCA 90 bp AATATGGCTGTATGTCACTGTTCCAATGTCACCACCTCCACAGCTTaGCCGTCCATGGTGACTGCGCTGTCTGATATCCTGGTGGTCACA +
Preference number: 5 (lower is better)
Translates to: NMAVCHCSNVTTSTA*PSMVTALSDILVVT
Trigger: TGTGACCACCAGGATATCAGACAGCGCAGTCACCATGGACGGCCAAGCTGTGGAGGTGGTGACATTGGAACAGTGACATACAGCCATATT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACCACTGGGCCTGGGTCATTTaGTCCACAGAGACTGGAATT +
Preference number: 5 (lower is better)
Translates to: DPGMNKNWVTVSGHVPYHWAWVI*STETGI
Trigger: AATTCCAGTCTCTGTGGACAAAATGACCCAGGCCCA...GTGGTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp ATTGTTTCCACAGCGCACCTTGATTTCATACAGATAATTCCATGCGGGTTTCATACCTGCACTGGTCCGTaGCCCTGGGCGAGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: IVSTAHLDFIQIIPCGFHTCTGP*PWARLV
Trigger: GACCAGCCTCGCCCAGGGCAACGGACCAGTGCAGGT...ATGAAACCCGCATGGAATTATCTGTATGAAATCAAGGTGCGCTGTGGAAACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GCCCGGGAGCTTTCAAGACATTCATCTGCCTGTGGCAAGGTCAGCACCTGGGCCTTTGGGACAGTGAAATaGACAATGCAGTTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: ARELSRHSSACGKVSTWAFGTVK*TMQFLH
Trigger: GTGAAGAAACTGCATTGTCAATTTCACTGTCCCAAA...GGCCCAGGTGCTGACCTTGCCACAGGCAGATGAATGTCTTGAAAGCTCCCGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS TCA 90 bp CAGATGAGCTGTCACCTCATCAGCTGCTGTGGAGTTGAGTATATCTaGGTCATCGTAAGAGGTGTCCTCGGGAGAAGAAGGCGAGTCTTC +
Preference number: 5 (lower is better)
Translates to: QMSCHLISCCGVEYI*VIVRGVLGRRRRVF
Trigger: GAAGACTCGCCTTCTTCTCCCGAGGACACCTCTTACGATGACTCAGATATACTCAACTCCACAGCAGCTGATGAGGTGACAGCTCATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
ENST00000454688.5
CDS-3UTR CAA 90 bp ACGGTTACCAAGAACACCCAGATAGTCAACACCTCTGAGGAGGCAAGCTGCTCCTCAGCTGCTGTGGAGTaGAGTATATCTGAGTCATCG +
Preference number: 5 (lower is better)
Translates to: TVTKNTQIVNTSEEASCSSAAVE*SISESS
Trigger: CGATGACTCAGATATACTCAACTCCACAGCAGCTGA...GGAGCAGCTTGCCTCCTCAGAGGTGTTGACTATCTGGGTGTTCTTGGTAACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGGGTGAATTATTGCCGAAGCAAACGTGTTaGTTGCCTCTTCCGGATAGA +
Preference number: 5 (lower is better)
Translates to: GDCVWPRTLPPTKLGELLPKQTC*LPLPDR
Trigger: TCTATCCGGAAGAGGCAACAAACACGTTTGCTTCGG...CAATAATTCACCCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACCATCACTCCGGACATTaGCCCAGGGGATATCTTCAG +
Preference number: 5 (lower is better)
Translates to: PPPEFVSSSTHDPGMNKNHHSGH*PRGYLQ
Trigger: CTGAAGATATCCCCTGGGCAAATGTCCGGAGTGATG...GTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp AGAAAATTGCTCCCACGGGTGTATCCTGGTCTAGGACGATTTTTCTTTCCTTCCTCAGTCAGGATCCACTaGCGACCTGCACGATCTGCC +
Preference number: 5 (lower is better)
Translates to: RKLLPRVYPGLGRFFFPSSVRIH*RPARSA
Trigger: GGCAGATCGTGCAGGTCGCAAGTGGATCCTGACTGA...GGAAGGAAAGAAAAATCGTCCTAGACCAGGATACACCCGTGGGAGCAATTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000353868.5
CDS-3UTR CAA 90 bp CACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCAATGGACCTGCTGCACTaGCTGGGCCACTGCATGTGC +
Preference number: 5 (lower is better)
Translates to: HIHTHKYTHTFPQKEVLPMDLLH*LGHCMC
Trigger: GCACATGCAGTGGCCCAGCAAGTGCAGCAGGTCCAT...TGGCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGGGTGAATTATTGTCAGCTGCTGTGGAGTaGAGTATATCTGAGTCATCG +
Preference number: 5 (lower is better)
Translates to: GDCVWPRTLPPTKLGELLSAAVE*SISESS
Trigger: CGATGACTCAGATATACTCAACTCCACAGCAGCTGA...CAATAATTCACCCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACGGCCTGTGTTTGCGTTaGCTGATCTTCAAAGGCATA +
Preference number: 5 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYGLCLR*LIFKGI
Trigger: TATGCCTTTGAAGATCAGCAAACGCAAACACAGGCC...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCAGAATAATTCACTaGGGCAACGGTGACCGTGGT +
Preference number: 5 (lower is better)
Translates to: VSSSTHDPGMNKNWVTVSGRIIH*GNGDRG
Trigger: ACCACGGTCACCGTTGCCCAAGTGAATTATTCTGCC...AGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTCAGGCCATTAGCATCTaGGACTCCAGTAAGTGCTCC +
Preference number: 5 (lower is better)
Translates to: VSSSTHDPGMNKNWVTVSQAISI*DSSKCS
Trigger: GGAGCACTTACTGGAGTCCAAGATGCTAATGGCCTG...AGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223190.8
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGAGGCCATTAGCATCTaGGACTCCAGTAAGTGCTCC +
Preference number: 5 (lower is better)
Translates to: VSSSTHDPGMNKNWVTVSEAISI*DSSKCS
Trigger: GGAGCACTTACTGGAGTCCAAGATGCTAATGGCCTC...AGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311967.6
ENST00000353868.5
CDS-3UTR CAA 90 bp ACGGTTACCAAGAACACCCAGATAGTCAACACCTCTGAGGAGGCAAGCTGCTCCAACTTCTCTCAAAGGTaGAGCAAGACGTGGAGAATC +
Preference number: 5 (lower is better)
Translates to: TVTKNTQIVNTSEEASCSNFSQR*SKTWRI
Trigger: GATTCTCCACGTCTTGCTCAACCTTTGAGAGAAGTT...GGAGCAGCTTGCCTCCTCAGAGGTGTTGACTATCTGGGTGTTCTTGGTAACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CCTCCGCCTGAGTTTGTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACAAGCAAACGTGTTTGTaGCCTCTTCCGGATAGATGG +
Preference number: 5 (lower is better)
Translates to: PPPEFVSSSTHDPGMNKNKQTCL*PLPDRW
Trigger: CCATCTATCCGGAAGAGGCAACAAACACGTTTGCTT...GTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGACAAACTCAGGCGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp AAGCACACTTACACGCACGCACTCCTCAAACCCCTAATACTTCGGTTACCTTCAACAGAGGACAATAGCTaGCTGTCCCACACGAGTAGT +
Preference number: 5 (lower is better)
Translates to: KHTYTHALLKPLILRLPSTEDNS*LSHTSS
Trigger: ACTACTCGTGTGGGACAGCAAGCTATTGTCCTCTGT...TGAAGGTAACCGAAGTATTAGGGGTTTGAGGAGTGCGTGCGTGTAAGTGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGGGTGAATTATTGAAACTGGGTGAATTATaGTTTCCACAGCGCACCTTG +
Preference number: 5 (lower is better)
Translates to: GDCVWPRTLPPTKLGELLKLGEL*FPQRTL
Trigger: CAAGGTGCGCTGTGGAAACAATAATTCACCCAGTTT...CAATAATTCACCCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp AAGCACACTTACACGCACGCACTCCTCAAACCCCTAATACTTCGGTTACCTTCAACCAGATGTCTCTTCTaGTTCATTCCAGCGCCTCCT +
Preference number: 5 (lower is better)
Translates to: KHTYTHALLKPLILRLPSTRCLF*FIPAPP
Trigger: AGGAGGCGCTGGAATGAACAAGAAGAGACATCTGGT...TGAAGGTAACCGAAGTATTAGGGGTTTGAGGAGTGCGTGCGTGTAAGTGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTACCAGATGTCTCTTCTaGTTCATTCCAGCGCCTCCT +
Preference number: 5 (lower is better)
Translates to: VSSSTHDPGMNKNWVTVSTRCLF*FIPAPP
Trigger: AGGAGGCGCTGGAATGAACAAGAAGAGACATCTGGT...AGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCACGTACCCTACAACTTCTCTCAAAGGTaGAGCAAGACGTGGAGAATC +
Preference number: 5 (lower is better)
Translates to: HDPGMNKNWVTVSGHVPYNFSQR*SKTWRI
Trigger: GATTCTCCACGTCTTGCTCAACCTTTGAGAGAAGTT...GTAGGGTACGTGGCCAGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTAAGCAAACGTGTTTGTaGCCTCTTCCGGATAGATGG +
Preference number: 5 (lower is better)
Translates to: VSSSTHDPGMNKNWVTVSKQTCL*PLPDRW
Trigger: CCATCTATCCGGAAGAGGCAACAAACACGTTTGCTT...AGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp AAGCACACTTACACGCACGCACTCCTCAAACCCCTAATACTTCGGTTACCTTCATCCAGGATCATGCTCTaGTACTTACGCACCACATTC +
Preference number: 5 (lower is better)
Translates to: KHTYTHALLKPLILRLPSSRIML*YLRTTF
Trigger: GAATGTGGTGCGTAAGTACAAGAGCATGATCCTGGA...TGAAGGTAACCGAAGTATTAGGGGTTTGAGGAGTGCGTGCGTGTAAGTGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTGGCCTGTGTTTGCGTTaGCTGATCTTCAAAGGCATA +
Preference number: 5 (lower is better)
Translates to: VSSSTHDPGMNKNWVTVSGLCLR*LIFKGI
Trigger: TATGCCTTTGAAGATCAGCAAACGCAAACACAGGCC...AGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CACACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCACCTCCGCCTGAGTTaGTCAGTAGCTCAACGCATG +
Preference number: 5 (lower is better)
Translates to: HTYTHISIHTHFRRKKSCHLRLS*SVAQRM
Trigger: CATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTG...GCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GTGAAATTGACAATGCAGTTTCTTCACCAATCCCAGAAAATCAAGAGTGGTGCTTCAGTCAGGATCCACTaGCGACCTGCACGATCTGCC +
Preference number: 5 (lower is better)
Translates to: VKLTMQFLHQSQKIKSGASVRIH*RPARSA
Trigger: GGCAGATCGTGCAGGTCGCAAGTGGATCCTGACTGA...AGCACCACTCTTGATTTTCTGGGATTGGTGAAGAAACTGCATTGTCAATTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311967.6
ENST00000353868.5
CDS-3UTR CAA 90 bp CACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCACTGGAGACTCAGGGCTaGCAGCTGAGAAAGACAGAG +
Preference number: 5 (lower is better)
Translates to: HIHTHKYTHTFPQKEVLPLETQG*QLRKTE
Trigger: CTCTGTCTTTCTCAGCTGCAAGCCCTGAGTCTCCAG...TGGCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS GCA 90 bp AAGACAGGGTTAGGTTTGGAGGGTGAGATACAGAGGACAATAGCTTaGTGTCCCACACGAGTAGTATATTCATCTAACGTGGCTCGAAGT +
Preference number: 5 (lower is better)
Translates to: KTGLGLEGEIQRTIA*CPTRVVYSSNVARS
Trigger: ACTTCGAGCCACGTTAGATGAATATACTACTCGTGTGGGACAGCAAGCTATTGTCCTCTGTATCTCACCCTCCAAACCTAACCCTGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
ENST00000454688.5
CDS-3UTR CAA 90 bp CACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCAAGCCATATGTTCGGTTaGGGTCACTCCGTGTTCCTC +
Preference number: 5 (lower is better)
Translates to: HIHTHKYTHTFPQKEVLPSHMFG*GHSVFL
Trigger: GAGGAACACGGAGTGACCCAAACCGAACATATGGCT...TGGCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CTTCTTGTTCATTCCAGCGCCTCCTCTGTGAAGCTACAGACAGTAGAGAAAATTCCGAAGCAAACGTGTTaGTTGCCTCTTCCGGATAGA +
Preference number: 5 (lower is better)
Translates to: LLVHSSASSVKLQTVEKIPKQTC*LPLPDR
Trigger: TCTATCCGGAAGAGGCAACAAACACGTTTGCTTCGG...AATTTTCTCTACTGTCTGTAGCTTCACAGAGGAGGCGCTGGAATGAACAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CACACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCATCACTCCGGACATTaGCCCAGGGGATATCTTCAG +
Preference number: 5 (lower is better)
Translates to: HTYTHISIHTHFRRKKSCHHSGH*PRGYLQ
Trigger: CTGAAGATATCCCCTGGGCAAATGTCCGGAGTGATG...GCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GGTGACTGTGTCTGGCCACGTACCCTACCACCCACTAAACTGGGTGAATTATTGTTTGGGACAGTGAAATaGACAATGCAGTTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: GDCVWPRTLPPTKLGELLFGTVK*TMQFLH
Trigger: GTGAAGAAACTGCATTGTCAATTTCACTGTCCCAAA...CAATAATTCACCCAGTTTAGTGGGTGGTAGGGTACGTGGCCAGACACAGTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTAAACTGGGTGAATTATaGTTTCCACAGCGCACCTTG +
Preference number: 5 (lower is better)
Translates to: VSSSTHDPGMNKNWVTVSKLGEL*FPQRTL
Trigger: CAAGGTGCGCTGTGGAAACAATAATTCACCCAGTTT...AGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GTGAAATTGACAATGCAGTTTCTTCACCAATCCCAGAAAATCAAGAGTGGTGCTCACCTCCGCCTGAGTTaGTCAGTAGCTCAACGCATG +
Preference number: 5 (lower is better)
Translates to: VKLTMQFLHQSQKIKSGAHLRLS*SVAQRM
Trigger: CATGCGTTGAGCTACTGACAAACTCAGGCGGAGGTG...AGCACCACTCTTGATTTTCTGGGATTGGTGAAGAAACTGCATTGTCAATTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS CCA 90 bp TCTGGACTACAGTCTGTGATGGTACAAGATGAGCTATACTATGTGTaGCTGTGGCCTGTGTTTGCGTTTGCTGATCTTCAAAGGCATACA +
Preference number: 5 (lower is better)
Translates to: SGLQSVMVQDELYYV*LWPVFAFADLQRHT
Trigger: TGTATGCCTTTGAAGATCAGCAAACGCAAACACAGGCCACAGCCACACATAGTATAGCTCATCTTGTACCATCACAGACTGTAGTCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCAACAGAGGACAATAGCTaGCTGTCCCACACGAGTAGT +
Preference number: 5 (lower is better)
Translates to: HIHTHKYTHTFPQKEVLPTEDNS*LSHTSS
Trigger: ACTACTCGTGTGGGACAGCAAGCTATTGTCCTCTGT...TGGCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CACCACAAAGGAACATGGACTTTAAAGTCCCTGGACAACTTCACAATGACGATAACAGAGGACAATAGCTaGCTGTCCCACACGAGTAGT +
Preference number: 5 (lower is better)
Translates to: HHKGTWTLKSLDNFTMTITEDNS*LSHTSS
Trigger: ACTACTCGTGTGGGACAGCAAGCTATTGTCCTCTGT...TATCGTCATTGTGAAGTTGTCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CACACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCACAGAGGACAATAGCTaGCTGTCCCACACGAGTAGT +
Preference number: 5 (lower is better)
Translates to: HTYTHISIHTHFRRKKSCTEDNS*LSHTSS
Trigger: ACTACTCGTGTGGGACAGCAAGCTATTGTCCTCTGT...GCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GCTACTGGAGACTCAGGGCTTGCAGCTGAGAAAGACAGAGTTAACGGTTACCAATTTGGGACAGTGAAATaGACAATGCAGTTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: ATGDSGLAAEKDRVNGYQFGTVK*TMQFLH
Trigger: GTGAAGAAACTGCATTGTCAATTTCACTGTCCCAAA...TTGGTAACCGTTAACTCTGTCTTTCTCAGCTGCAAGCCCTGAGTCTCCAGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp AGAAAATTGCTCCCACGGGTGTATCCTGGTCTAGGACGATTTTTCTTTCCTTCCAAACTGGGTGAATTATaGTTTCCACAGCGCACCTTG +
Preference number: 5 (lower is better)
Translates to: RKLLPRVYPGLGRFFFPSKLGEL*FPQRTL
Trigger: CAAGGTGCGCTGTGGAAACAATAATTCACCCAGTTT...GGAAGGAAAGAAAAATCGTCCTAGACCAGGATACACCCGTGGGAGCAATTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GTGAAATTGACAATGCAGTTTCTTCACCAATCCCAGAAAATCAAGAGTGGTGCTGAGGCCATTAGCATCTaGGACTCCAGTAAGTGCTCC +
Preference number: 5 (lower is better)
Translates to: VKLTMQFLHQSQKIKSGAEAISI*DSSKCS
Trigger: GGAGCACTTACTGGAGTCCAAGATGCTAATGGCCTC...AGCACCACTCTTGATTTTCTGGGATTGGTGAAGAAACTGCATTGTCAATTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311967.6
ENST00000353868.5
CDS CCA 90 bp CTACAGTCTGTGATGGTACAAGATGAGCTATACTATGTGTGGCTGTaGCCTGTGTTTGCGTTTGCTGATCTTCAAAGGCATACAAAAGGT +
Preference number: 5 (lower is better)
Translates to: LQSVMVQDELYYVWL*PVFAFADLQRHTKG
Trigger: ACCTTTTGTATGCCTTTGAAGATCAGCAAACGCAAACACAGGCCACAGCCACACATAGTATAGCTCATCTTGTACCATCACAGACTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp AACTATTTGGAGGTTATTTCACCACAAAGGAACATGGACTTTAAAGTCCCTGGAAGCCATATGTTCGGTTaGGGTCACTCCGTGTTCCTC +
Preference number: 5 (lower is better)
Translates to: NYLEVISPQRNMDFKVPGSHMFG*GHSVFL
Trigger: GAGGAACACGGAGTGACCCAAACCGAACATATGGCT...TCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTGAAATAACCTCCAAATAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GTGAAATTGACAATGCAGTTTCTTCACCAATCCCAGAAAATCAAGAGTGGTGCTACAGAGGACAATAGCTaGCTGTCCCACACGAGTAGT +
Preference number: 5 (lower is better)
Translates to: VKLTMQFLHQSQKIKSGATEDNS*LSHTSS
Trigger: ACTACTCGTGTGGGACAGCAAGCTATTGTCCTCTGT...AGCACCACTCTTGATTTTCTGGGATTGGTGAAGAAACTGCATTGTCAATTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp AACTATTTGGAGGTTATTTCACCACAAAGGAACATGGACTTTAAAGTCCCTGGAGGCAGAATAATTCACTaGGGCAACGGTGACCGTGGT +
Preference number: 5 (lower is better)
Translates to: NYLEVISPQRNMDFKVPGGRIIH*GNGDRG
Trigger: ACCACGGTCACCGTTGCCCAAGTGAATTATTCTGCC...TCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTGAAATAACCTCCAAATAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GTCAGTAGCTCAACGCATGACCCTGGTATGAACAAAAACTGGGTGACTGTGTCTTTTGGGACAGTGAAATaGACAATGCAGTTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: VSSSTHDPGMNKNWVTVSFGTVK*TMQFLH
Trigger: GTGAAGAAACTGCATTGTCAATTTCACTGTCCCAAA...AGACACAGTCACCCAGTTTTTGTTCATACCAGGGTCATGCGTTGAGCTACTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp GTGAAATTGACAATGCAGTTTCTTCACCAATCCCAGAAAATCAAGAGTGGTGCTAAGCAAACGTGTTTGTaGCCTCTTCCGGATAGATGG +
Preference number: 5 (lower is better)
Translates to: VKLTMQFLHQSQKIKSGAKQTCL*PLPDRW
Trigger: CCATCTATCCGGAAGAGGCAACAAACACGTTTGCTT...AGCACCACTCTTGATTTTCTGGGATTGGTGAAGAAACTGCATTGTCAATTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CACACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCAAACTGGGTGAATTATaGTTTCCACAGCGCACCTTG +
Preference number: 5 (lower is better)
Translates to: HTYTHISIHTHFRRKKSCKLGEL*FPQRTL
Trigger: CAAGGTGCGCTGTGGAAACAATAATTCACCCAGTTT...GCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp AACTATTTGGAGGTTATTTCACCACAAAGGAACATGGACTTTAAAGTCCCTGGATCCAGGATCATGCTCTaGTACTTACGCACCACATTC +
Preference number: 5 (lower is better)
Translates to: NYLEVISPQRNMDFKVPGSRIML*YLRTTF
Trigger: GAATGTGGTGCGTAAGTACAAGAGCATGATCCTGGA...TCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTGAAATAACCTCCAAATAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CACACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCCAGAGATTTGGCCTGTaGAAAAGTCAGGTGAATTCA +
Preference number: 5 (lower is better)
Translates to: HTYTHISIHTHFRRKKSCQRFGL*KSQVNS
Trigger: TGAATTCACCTGACTTTTCAACAGGCCAAATCTCTG...GCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CACACATACACACACATAAGTATACACACACATTTCCGCAGAAAGAAGTCCTGCTTTGGGACAGTGAAATaGACAATGCAGTTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: HTYTHISIHTHFRRKKSCFGTVK*TMQFLH
Trigger: GTGAAGAAACTGCATTGTCAATTTCACTGTCCCAAA...GCAGGACTTCTTTCTGCGGAAATGTGTGTGTATACTTATGTGTGTGTATGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp AACTATTTGGAGGTTATTTCACCACAAAGGAACATGGACTTTAAAGTCCCTGGAAACTTCTCTCAAAGGTaGAGCAAGACGTGGAGAATC +
Preference number: 5 (lower is better)
Translates to: NYLEVISPQRNMDFKVPGNFSQR*SKTWRI
Trigger: GATTCTCCACGTCTTGCTCAACCTTTGAGAGAAGTT...TCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTGAAATAACCTCCAAATAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS-3UTR CAA 90 bp CACCACAAAGGAACATGGACTTTAAAGTCCCTGGACAACTTCACAATGACGATAGAAGTTCTACAAGTTTaGTCCTGTTTAAATGTCAGC +
Preference number: 5 (lower is better)
Translates to: HHKGTWTLKSLDNFTMTIEVLQV*SCLNVS
Trigger: GCTGACATTTAAACAGGACAAAACTTGTAGAACTTC...TATCGTCATTGTGAAGTTGTCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353868.5
ENST00000393230.6
CDS-3UTR CAA 90 bp AACTATTTGGAGGTTATTTCACCACAAAGGAACATGGACTTTAAAGTCCCTGGAGAAGTTCTACAAGTTTaGTCCTGTTTAAATGTCAGC +
Preference number: 5 (lower is better)
Translates to: NYLEVISPQRNMDFKVPGEVLQV*SCLNVS
Trigger: GCTGACATTTAAACAGGACAAAACTTGTAGAACTTC...TCCAGGGACTTTAAAGTCCATGTTCCTTTGTGGTGAAATAACCTCCAAATAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353868.5
ENST00000393230.6
CDS GCA 72 bp AGCGGCTGCGCTACCGTGGGCCTGCGCCGTGGAGACTaGGACCGCGCCGGCTCCTCGCAGCCTCCTGCCACC +
Preference number: 6 (lower is better)
Translates to: SGCATVGLRRGD*DRAGSSQPPAT
Trigger: GGTGGCAGGAGGCTGCGAGGAGCCGGCGCGGTCGCAGTCTCCACGGCGCAGGCCCACGGTAGCGCAGCCGCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393232.6
ENST00000454688.5
ENST00000477428.5
CDS GCA 72 bp CACTCCAGCCTCAGAGCGGCTGCGCTACCGTGGGCCTaGGCCGTGGAGACTGCGACCGCGCCGGCTCCTCGC +
Preference number: 6 (lower is better)
Translates to: HSSLRAAALPWA*AVETATAPAPR
Trigger: GCGAGGAGCCGGCGCGGTCGCAGTCTCCACGGCGCAGGCCCACGGTAGCGCAGCCGCTCTGAGGCTGGAGTG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454688.5
CDS GCA 72 bp GACCAGGAACTCAGAGCGGCTGCGCTACCGTGGGCCTaGGCCGTGGAGACTGCGACCGCGCCGGCTCCTCGC +
Preference number: 6 (lower is better)
Translates to: DQELRAAALPWA*AVETATAPAPR
Trigger: GCGAGGAGCCGGCGCGGTCGCAGTCTCCACGGCGCAGGCCCACGGTAGCGCAGCCGCTCTGAGTTCCTGGTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477428.5
CDS GCA 72 bp GAAGTTCTACTCAGAGCGGCTGCGCTACCGTGGGCCTaGGCCGTGGAGACTGCGACCGCGCCGGCTCCTCGC +
Preference number: 6 (lower is better)
Translates to: EVLLRAAALPWA*AVETATAPAPR
Trigger: GCGAGGAGCCGGCGCGGTCGCAGTCTCCACGGCGCAGGCCCACGGTAGCGCAGCCGCTCTGAGTAGAACTTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223190.8
ENST00000311967.6
CDS GCA 72 bp CATGAAGTTCTCAGAGCGGCTGCGCTACCGTGGGCCTaGGCCGTGGAGACTGCGACCGCGCCGGCTCCTCGC +
Preference number: 6 (lower is better)
Translates to: HEVLRAAALPWA*AVETATAPAPR
Trigger: GCGAGGAGCCGGCGCGGTCGCAGTCTCCACGGCGCAGGCCCACGGTAGCGCAGCCGCTCTGAGAACTTCATG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393232.6
CDS CCA 72 bp GCTGCCACTGCGGCCTCTGCCAACGATGCCACCGCCTaGGTGGCCTCTGATGCTTGCGTCGTCTGGATGGTC +
Preference number: 6 (lower is better)
Translates to: AATAASANDATA*VASDACVVWMV
Trigger: GACCATCCAGACGACGCAAGCATCAGAGGCCACCCAGGCGGTGGCATCGTTGGCAGAGGCCGCAGTGGCAGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS GCA 72 bp TCTGATATCCTGGTGGTCACAGGGGCCATGGCCACCTaGACTGGTCCGTTGCCCTGGGCGAGGCTGGTCACC +
Preference number: 6 (lower is better)
Translates to: SDILVVTGAMAT*TGPLPWARLVT
Trigger: GGTGACCAGCCTCGCCCAGGGCAACGGACCAGTGCAGGTGGCCATGGCCCCTGTGACCACCAGGATATCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS CCA 72 bp CCCCAGACAAGACGATCTGTCCCCCACCTTGTAAGGTaGCCTCAGCCAGGGTGGCGACAGCATGGGCGGCAG +
Preference number: 6 (lower is better)
Translates to: PQTRRSVPHLVR*PQPGWRQHGRQ
Trigger: CTGCCGCCCATGCTGTCGCCACCCTGGCTGAGGCCACCTTACAAGGTGGGGGACAGATCGTCTTGTCTGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS CCA 72 bp ACAGGGGCCATGGCCACCTGCACTGGTCCGTTGCCCTaGGCGAGGCTGGTCACCACAGTCTGGTACATGCTC +
Preference number: 6 (lower is better)
Translates to: TGAMATCTGPLP*ARLVTTVWYML
Trigger: GAGCATGTACCAGACTGTGGTGACCAGCCTCGCCCAGGGCAACGGACCAGTGCAGGTGGCCATGGCCCCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS CCA 72 bp TATCCTGGTGGTCACAGGGGCCATGGCCACCTGCACTaGTCCGTTGCCCTGGGCGAGGCTGGTCACCACAGT +
Preference number: 6 (lower is better)
Translates to: YPGGHRGHGHLH*SVALGEAGHHS
Trigger: ACTGTGGTGACCAGCCTCGCCCAGGGCAACGGACCAGTGCAGGTGGCCATGGCCCCTGTGACCACCAGGATA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS TCA 72 bp GGCCTCTGCCAACGATGCCACCGCCTGGGTGGCCTCTaGTGCTTGCGTCGTCTGGATGGTCATCTCACCTCC +
Preference number: 6 (lower is better)
Translates to: GLCQRCHRLGGL*CLRRLDGHLTS
Trigger: GGAGGTGAGATGACCATCCAGACGACGCAAGCATCAGAGGCCACCCAGGCGGTGGCATCGTTGGCAGAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS CCA 72 bp CCACTGCGGCCTCTGCCAACGATGCCACCGCCTGGGTaGCCTCTGATGCTTGCGTCGTCTGGATGGTCATCT +
Preference number: 6 (lower is better)
Translates to: PLRPLPTMPPPG*PLMLASSGWSS
Trigger: AGATGACCATCCAGACGACGCAAGCATCAGAGGCCACCCAGGCGGTGGCATCGTTGGCAGAGGCCGCAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS CCA 72 bp GGTCCGTTGCCCTGGGCGAGGCTGGTCACCACAGTCTaGTACATGCTCACAGGGATCTGGACCAGGCCTGTG +
Preference number: 6 (lower is better)
Translates to: GPLPWARLVTTV*YMLTGIWTRPV
Trigger: CACAGGCCTGGTCCAGATCCCTGTGAGCATGTACCAGACTGTGGTGACCAGCCTCGCCCAGGGCAACGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311967.6
ENST00000353868.5
CDS TCA 72 bp CTCCACAGCTTGGCCGTCCATGGTGACTGCGCTGTCTaGTATCCTGGTGGTCACAGGGGCCATGGCCACCTG +
Preference number: 6 (lower is better)
Translates to: LHSLAVHGDCAV*YPGGHRGHGHL
Trigger: CAGGTGGCCATGGCCCCTGTGACCACCAGGATATCAGACAGCGCAGTCACCATGGACGGCCAAGCTGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS GCA 72 bp AGTGACTGTAGCTCCCTGCTGCATCTCCTGAGAAGCTaGCACTGCGGCCTCTGCCAACGATGCCACCGCCTG +
Preference number: 6 (lower is better)
Translates to: SDCSSLLHLLRS*HCGLCQRCHRL
Trigger: CAGGCGGTGGCATCGTTGGCAGAGGCCGCAGTGGCAGCTTCTCAGGAGATGCAGCAGGGAGCTACAGTCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS GCA 72 bp GGATGTGGAAGTTGCAGAGAGCCGAGATCACACCACTaGACTCCAGCCTCAGAGCGGCTGCGCTACCGTGGG +
Preference number: 6 (lower is better)
Translates to: GCGSCREPRSHH*TPASERLRYRG
Trigger: CCCACGGTAGCGCAGCCGCTCTGAGGCTGGAGTGCAGTGGTGTGATCTCGGCTCTCTGCAACTTCCACATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454688.5
CDS CCA 72 bp TGGCCACCTGCACTGGTCCGTTGCCCTGGGCGAGGCTaGTCACCACAGTCTGGTACATGCTCACAGGGATCT +
Preference number: 6 (lower is better)
Translates to: WPPALVRCPGRG*SPQSGTCSQGS
Trigger: AGATCCCTGTGAGCATGTACCAGACTGTGGTGACCAGCCTCGCCCAGGGCAACGGACCAGTGCAGGTGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS TCA 72 bp AGCGCCATAGTGACTGTAGCTCCCTGCTGCATCTCCTaGGAAGCTGCCACTGCGGCCTCTGCCAACGATGCC +
Preference number: 6 (lower is better)
Translates to: SAIVTVAPCCIS*EAATAASANDA
Trigger: GGCATCGTTGGCAGAGGCCGCAGTGGCAGCTTCTCAGGAGATGCAGCAGGGAGCTACAGTCACTATGGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS GCA 72 bp GCCAACGATGCCACCGCCTGGGTGGCCTCTGATGCTTaGGTCGTCTGGATGGTCATCTCACCTCCCTGTAAC +
Preference number: 6 (lower is better)
Translates to: ANDATAWVASDA*VVWMVISPPCN
Trigger: GTTACAGGGAGGTGAGATGACCATCCAGACGACGCAAGCATCAGAGGCCACCCAGGCGGTGGCATCGTTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS GCA 72 bp TGCCCTGGGCGAGGCTGGTCACCACAGTCTGGTACATaGTCACAGGGATCTGGACCAGGCCTGTGGCTTTGT +
Preference number: 6 (lower is better)
Translates to: CPGRGWSPQSGT*SQGSGPGLWLC
Trigger: ACAAAGCCACAGGCCTGGTCCAGATCCCTGTGAGCATGTACCAGACTGTGGTGACCAGCCTCGCCCAGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311967.6
ENST00000353868.5
CDS CCA 72 bp GGTCCGTTGCCCTGGGCGAGGCTGGTCACCACAGTCTaGTACATGCTCACAGGGATCTGGACCAGGCCATTA +
Preference number: 6 (lower is better)
Translates to: GPLPWARLVTTV*YMLTGIWTRPL
Trigger: TAATGGCCTGGTCCAGATCCCTGTGAGCATGTACCAGACTGTGGTGACCAGCCTCGCCCAGGGCAACGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223190.8
ENST00000393230.6
ENST00000393232.6
CDS TCA 72 bp GACTGGAATTCCGTCGATGGTGAGAGGCGGCAGTTCTaGGTTAACCTCCTGTGGCGCAGGGGCGTGTTCTGC +
Preference number: 6 (lower is better)
Translates to: DWNSVDGERRQF*VNLLWRRGVFC
Trigger: GCAGAACACGCCCCTGCGCCACAGGAGGTTAACTCAGAACTGCCGCCTCTCACCATCGACGGAATTCCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
ENST00000454688.5
CDS TCA 72 bp CCAATGTCACCACCTCCACAGCTTGGCCGTCCATGGTaGCTGCGCTGTCTGATATCCTGGTGGTCACAGGGG +
Preference number: 6 (lower is better)
Translates to: PMSPPPQLGRPW*LRCLISWWSQG
Trigger: CCCCTGTGACCACCAGGATATCAGACAGCGCAGTCACCATGGACGGCCAAGCTGTGGAGGTGGTGACATTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS GCA 72 bp AGCATCTTGGACTCCAGTAAGTGCTCCGACGGCTGCTaGGGTTTCCCCAGACAAGACGATCTGTCCCCCACC +
Preference number: 6 (lower is better)
Translates to: SILDSSKCSDGC*GFPRQDDLSPT
Trigger: GGTGGGGGACAGATCGTCTTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAAGATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS GCA 72 bp CTGGACCAGGCCATTAGCATCTTGGACTCCAGTAAGTaGTCCGACGGCTGCTGCGGTTTCCCCAGACAAGAC +
Preference number: 6 (lower is better)
Translates to: LDQAISILDSSK*SDGCCGFPRQD
Trigger: GTCTTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAAGATGCTAATGGCCTGGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223190.8
ENST00000393230.6
ENST00000393232.6
CDS CCA 72 bp CCGCCTGGGTGGCCTCTGATGCTTGCGTCGTCTGGATaGTCATCTCACCTCCCTGTAACGTGGCCCAATTTT +
Preference number: 6 (lower is better)
Translates to: PPGWPLMLASSG*SSHLPVTWPNF
Trigger: AAAATTGGGCCACGTTACAGGGAGGTGAGATGACCATCCAGACGACGCAAGCATCAGAGGCCACCCAGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS GCA 72 bp ATTAGCATCTTGGACTCCAGTAAGTGCTCCGACGGCTaGTGCGGTTTCCCCAGACAAGACGATCTGTCCCCC +
Preference number: 6 (lower is better)
Translates to: ISILDSSKCSDG*CGFPRQDDLSP
Trigger: GGGGGACAGATCGTCTTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAAGATGCTAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS GCA 72 bp AGGGTTGGTCAGCTGCATCCACTGAAGATTCCATGTTaGTGGTGGAAGTCTCCCCCTCCTGCCACTGGTGAG +
Preference number: 6 (lower is better)
Translates to: RVGQLHPLKIPC*WWKSPPPATGE
Trigger: CTCACCAGTGGCAGGAGGGGGAGACTTCCACCAGCAACATGGAATCTTCAGTGGATGCAGCTGACCAACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477428.5
CDS GCA 72 bp CTCAAATACATGAGGCCGTTTCCGTTTCTTTCCTGTTaGCACAGCAGCAGCAGCGGCCATTCCCACAGGACC +
Preference number: 6 (lower is better)
Translates to: LKYMRPFPFLSC*HSSSSGHSHRT
Trigger: GGTCCTGTGGGAATGGCCGCTGCTGCTGCTGTGGCAACAGGAAAGAAACGGAAACGGCCTCATGTATTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
ENST00000454688.5
CDS CAA 72 bp GCTTTTGCTCTTCTGTGCGGACATCACTCCGGACATTaGCCCAGGGGATATCTTCAGGCCACCAGATGGGCT +
Preference number: 6 (lower is better)
Translates to: AFALLCGHHSGH*PRGYLQATRWA
Trigger: AGCCCATCTGGTGGCCTGAAGATATCCCCTGGGCAAATGTCCGGAGTGATGTCCGCACAGAAGAGCAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS CAA 90 bp ACAGGGATCTGGACCAGGCCTGTGGCTTTGTCAGTCAGGATCCACTaGCGACCTGCACGATCTGCCATAAAGAGGCCATTAGCATCTTGG +
Preference number: 6 (lower is better)
Translates to: TGIWTRPVALSVRIH*RPARSAIKRPLASW
Trigger: CCAAGATGCTAATGGCCTCTTTATGGCAGATCGTGCAGGTCGCAAGTGGATCCTGACTGACAAAGCCACAGGCCTGGTCCAGATCCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311967.6
ENST00000353868.5
CDS TCA 72 bp ATTCACTTGGGCAACGGTGACCGTGGTTGGCAATTCTaGAGCATCAGCCAATGTGGCTACTGTTGCCCCCGT +
Preference number: 6 (lower is better)
Translates to: IHLGNGDRGWQF*SISQCGYCCPR
Trigger: ACGGGGGCAACAGTAGCCACATTGGCTGATGCTTCAGAATTGCCAACCACGGTCACCGTTGCCCAAGTGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS TCA 72 bp ACTGAGAAGTCAGGAGGGTTGGTCAGCTGCATCCACTaGAGATTCCATGTTGCTGGTGGAAGTCTCCCCCTC +
Preference number: 6 (lower is better)
Translates to: TEKSGGLVSCIH*RFHVAGGSLPL
Trigger: GAGGGGGAGACTTCCACCAGCAACATGGAATCTTCAGTGGATGCAGCTGACCAACCCTCCTGACTTCTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477428.5
CDS GCA 72 bp CTTTTGCTCTTCTGTGCGGACATCACTCCGGACATTTaGCCAGGGGATATCTTCAGGCCACCAGATGGGCTT +
Preference number: 6 (lower is better)
Translates to: LLLFCADITPDI*PGDIFRPPDGL
Trigger: AAGCCCATCTGGTGGCCTGAAGATATCCCCTGGGCAAATGTCCGGAGTGATGTCCGCACAGAAGAGCAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS GCA 72 bp CCTGGGTCCATGAAACCCTCTGCTTTTGCTCTTCTGTaGGGACATCACTCCGGACATTTGCCCAGGGGATAT +
Preference number: 6 (lower is better)
Translates to: PGSMKPSAFALL*GHHSGHLPRGY
Trigger: ATATCCCCTGGGCAAATGTCCGGAGTGATGTCCGCACAGAAGAGCAAAAGCAGAGGGTTTCATGGACCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS GCA 72 bp CATAAAGAGGCCATTAGCATCTTGGACTCCAGTAAGTaGTCCGACGGCTGCTGCGGTTTCCCCAGACAAGAC +
Preference number: 6 (lower is better)
Translates to: HKEAISILDSSK*SDGCCGFPRQD
Trigger: GTCTTGTCTGGGGAAACCGCAGCAGCCGTCGGAGCACTTACTGGAGTCCAAGATGCTAATGGCCTCTTTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311967.6
ENST00000353868.5
CDS CCA 72 bp GTTGGTCAGCTGCATCCACTGAAGATTCCATGTTGCTaGTGGAAGTCTCCCCCTCCTGCCACTGGTGAGAAA +
Preference number: 6 (lower is better)
Translates to: VGQLHPLKIPCC*WKSPPPATGEK
Trigger: TTTCTCACCAGTGGCAGGAGGGGGAGACTTCCACCAGCAACATGGAATCTTCAGTGGATGCAGCTGACCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477428.5
CDS CAA 72 bp ATGCTCGGTGTAAGTAGCCACATGGACCTGCTGCACTaGCTGGGCCACTGCATGTGCTTCTATGGTAGCCAT +
Preference number: 6 (lower is better)
Translates to: MLGVSSHMDLLH*LGHCMCFYGSH
Trigger: ATGGCTACCATAGAAGCACATGCAGTGGCCCAGCAAGTGCAGCAGGTCCATGTGGCTACTTACACCGAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
ENST00000454688.5
CDS CAA 72 bp TGGACCAGGCCTGTGGCTTTGTCAGTCAGGATCCACTaGCGACCTGCACGATCTGCCATAAAGAGGCCATTA +
Preference number: 6 (lower is better)
Translates to: WTRPVALSVRIH*RPARSAIKRPL
Trigger: TAATGGCCTCTTTATGGCAGATCGTGCAGGTCGCAAGTGGATCCTGACTGACAAAGCCACAGGCCTGGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311967.6
ENST00000353868.5
CDS CAA 90 bp AAACCCTCTGCTTTTGCTCTTCTGTGCGGACATCACTCCGGACATTaGCCCAGGGGATATCTTCAGGCCACCAGATGGGCTTGCAGCTTT +
Preference number: 6 (lower is better)
Translates to: KPSAFALLCGHHSGH*PRGYLQATRWACSF
Trigger: AAAGCTGCAAGCCCATCTGGTGGCCTGAAGATATCCCCTGGGCAAATGTCCGGAGTGATGTCCGCACAGAAGAGCAAAAGCAGAGGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS GCA 72 bp AGTAGCCACATGGACCTGCTGCACTTGCTGGGCCACTaGATGTGCTTCTATGGTAGCCATATGTTCGGTTTG +
Preference number: 6 (lower is better)
Translates to: SSHMDLLHLLGH*MCFYGSHMFGL
Trigger: CAAACCGAACATATGGCTACCATAGAAGCACATGCAGTGGCCCAGCAAGTGCAGCAGGTCCATGTGGCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
ENST00000454688.5
CDS GCA 72 bp CCGACCTGTAGAGTACTTGAGCATCTCTGGGATAAATaGCCGAAGCTGGGCCTGGGTCATTTTGTCCACAGA +
Preference number: 6 (lower is better)
Translates to: PTCRVLEHLWDK*PKLGLGHFVHR
Trigger: TCTGTGGACAAAATGACCCAGGCCCAGCTTCGGGCATTTATCCCAGAGATGCTCAAGTACTCTACAGGTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS GCA 72 bp GCCTGTGGCTTTGTCAGTCAGGATCCACTTGCGACCTaGACGATCTGCCATAAAGAGGCCATTAGCATCTTG +
Preference number: 6 (lower is better)
Translates to: ACGFVSQDPLAT*TICHKEAISIL
Trigger: CAAGATGCTAATGGCCTCTTTATGGCAGATCGTGCAGGTCGCAAGTGGATCCTGACTGACAAAGCCACAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311967.6
ENST00000353868.5
CDS CAA 72 bp GCCAGAGCAGACTCCAGGTCTTCCAGGATCATGCTCTaGTACTTACGCACCACATTCTCCAAAGGTGCTGCA +
Preference number: 6 (lower is better)
Translates to: ARADSRSSRIML*YLRTTFSKGAA
Trigger: TGCAGCACCTTTGGAGAATGTGGTGCGTAAGTACAAGAGCATGATCCTGGAAGACCTGGAGTCTGCTCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
ENST00000454688.5
CDS TCA 72 bp CCAGATGAGCTGTCACCTCATCAGCTGCTGTGGAGTTaGGTATATCTGAGTCATCGTAAGAGGTGTCCTCGG +
Preference number: 6 (lower is better)
Translates to: PDELSPHQLLWS*VYLSHRKRCPR
Trigger: CCGAGGACACCTCTTACGATGACTCAGATATACTCAACTCCACAGCAGCTGATGAGGTGACAGCTCATCTGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
ENST00000454688.5
CDS TCA 72 bp CATCAGCCACGGCAGAATAATTCACTTGGGCAACGGTaGCCGTGGTTGGCAATTCTGAAGCATCAGCCAATG +
Preference number: 6 (lower is better)
Translates to: HQPRQNNSLGQR*PWLAILKHQPM
Trigger: CATTGGCTGATGCTTCAGAATTGCCAACCACGGTCACCGTTGCCCAAGTGAATTATTCTGCCGTGGCTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS GCA 72 bp GTTCTGCCAGAGCAGACTCCAGGTCTTCCAGGATCATaGTCTTGTACTTACGCACCACATTCTCCAAAGGTG +
Preference number: 6 (lower is better)
Translates to: VLPEQTPGLPGS*SCTYAPHSPKV
Trigger: CACCTTTGGAGAATGTGGTGCGTAAGTACAAGAGCATGATCCTGGAAGACCTGGAGTCTGCTCTGGCAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
ENST00000454688.5
CDS CCA 72 bp TGGTTTTCCCCGACCTGTAGAGTACTTGAGCATCTCTaGGATAAATGCCCGAAGCTGGGCCTGGGTCATTTT +
Preference number: 6 (lower is better)
Translates to: WFSPTCRVLEHL*DKCPKLGLGHF
Trigger: AAAATGACCCAGGCCCAGCTTCGGGCATTTATCCCAGAGATGCTCAAGTACTCTACAGGTCGGGGAAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS TCA 72 bp TGTCACCTCATCAGCTGCTGTGGAGTTGAGTATATCTaGGTCATCGTAAGAGGTGTCCTCGGGAGAAGAAGG +
Preference number: 6 (lower is better)
Translates to: CHLISCCGVEYI*VIVRGVLGRRR
Trigger: CCTTCTTCTCCCGAGGACACCTCTTACGATGACTCAGATATACTCAACTCCACAGCAGCTGATGAGGTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
ENST00000454688.5
CDS TCA 72 bp ATGTTGCTGGTGGAAGTCTCCCCCTCCTGCCACTGGTaGGAAAAATGGCTCAGACTGTTGCTTCTTCACTTT +
Preference number: 6 (lower is better)
Translates to: MLLVEVSPSCHW*EKWLRLLLLHF
Trigger: AAAGTGAAGAAGCAACAGTCTGAGCCATTTTTCTCACCAGTGGCAGGAGGGGGAGACTTCCACCAGCAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000477428.5
CDS GCA 72 bp TTTGTCAGTCAGGATCCACTTGCGACCTGCACGATCTaGCATAAAGAGGCCATTAGCATCTTGGACTCCAGT +
Preference number: 6 (lower is better)
Translates to: FVSQDPLATCTI*HKEAISILDSS
Trigger: ACTGGAGTCCAAGATGCTAATGGCCTCTTTATGGCAGATCGTGCAGGTCGCAAGTGGATCCTGACTGACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311967.6
ENST00000353868.5
CDS TCA 72 bp ATACTATGTGTGGCTGTGGCCTGTGTTTGCGTTTGCTaGTCTTCAAAGGCATACAAAAGGTCTTCCCGCCCA +
Preference number: 6 (lower is better)
Translates to: ILCVAVACVCVC*SSKAYKRSSRP
Trigger: TGGGCGGGAAGACCTTTTGTATGCCTTTGAAGATCAGCAAACGCAAACACAGGCCACAGCCACACATAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS CAA 90 bp TTCTCCAAAGGTGCTGCACCAAACACTTTAAAGACAGGGTTAGGTTaGGAGGGTGAGATACAGAGGACAATAGCTTGCTGTCCCACACGA +
Preference number: 6 (lower is better)
Translates to: FSKGAAPNTLKTGLG*EGEIQRTIACCPTR
Trigger: TCGTGTGGGACAGCAAGCTATTGTCCTCTGTATCTCACCCTCCAAACCTAACCCTGTCTTTAAAGTGTTTGGTGCAGCACCTTTGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
ENST00000454688.5
CDS CAA 90 bp TACAAGATGAGCTATACTATGTGTGGCTGTGGCCTGTGTTTGCGTTaGCTGATCTTCAAAGGCATACAAAAGGTCTTCCCGCCCATGCTG +
Preference number: 6 (lower is better)
Translates to: YKMSYTMCGCGLCLR*LIFKGIQKVFPPML
Trigger: CAGCATGGGCGGGAAGACCTTTTGTATGCCTTTGAAGATCAGCAAACGCAAACACAGGCCACAGCCACACATAGTATAGCTCATCTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS CAA 90 bp AGCTCTTGTTTGCCAACAGTAGCCTATGGTGGCACTTGTCTTAAATaGTGTATCATGCTTTTCCTGCTCCCTCCCTGCAGTGGCATAGCA +
Preference number: 6 (lower is better)
Translates to: SSCLPTVAYGGTCLK*CIMLFLLPPCSGIA
Trigger: TGCTATGCCACTGCAGGGAGGGAGCAGGAAAAGCATGATACACAATTTAAGACAAGTGCCACCATAGGCTACTGTTGGCAAACAAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477428.5
CDS TCA 72 bp TGCCTCTTCCGGATAGATGGATTAGACTCAAATACATaGGGCCGTTTCCGTTTCTTTCCTGTTGCCACAGCA +
Preference number: 6 (lower is better)
Translates to: CLFRIDGLDSNT*GRFRFFPVATA
Trigger: TGCTGTGGCAACAGGAAAGAAACGGAAACGGCCTCATGTATTTGAGTCTAATCCATCTATCCGGAAGAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
ENST00000454688.5
CDS TCA 72 bp ACCAAACACTTTAAAGACAGGGTTAGGTTTGGAGGGTaGGATACAGAGGACAATAGCTTGCTGTCCCACACG +
Preference number: 6 (lower is better)
Translates to: TKHFKDRVRFGG*DTEDNSLLSHT
Trigger: CGTGTGGGACAGCAAGCTATTGTCCTCTGTATCTCACCCTCCAAACCTAACCCTGTCTTTAAAGTGTTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
ENST00000454688.5
CDS CAA 72 bp AGCTATACTATGTGTGGCTGTGGCCTGTGTTTGCGTTaGCTGATCTTCAAAGGCATACAAAAGGTCTTCCCG +
Preference number: 6 (lower is better)
Translates to: SYTMCGCGLCLR*LIFKGIQKVFP
Trigger: CGGGAAGACCTTTTGTATGCCTTTGAAGATCAGCAAACGCAAACACAGGCCACAGCCACACATAGTATAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS TCA 72 bp CTAAAAGTCTGGACTACAGTCTGTGATGGTACAAGATaGGCTATACTATGTGTGGCTGTGGCCTGTGTTTGC +
Preference number: 6 (lower is better)
Translates to: LKVWTTVCDGTR*AILCVAVACVC
Trigger: GCAAACACAGGCCACAGCCACACATAGTATAGCTCATCTTGTACCATCACAGACTGTAGTCCAGACTTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS GCA 72 bp GCTCTTGTACTTACGCACCACATTCTCCAAAGGTGCTaGACCAAACACTTTAAAGACAGGGTTAGGTTTGGA +
Preference number: 6 (lower is better)
Translates to: ALVLTHHILQRC*TKHFKDRVRFG
Trigger: TCCAAACCTAACCCTGTCTTTAAAGTGTTTGGTGCAGCACCTTTGGAGAATGTGGTGCGTAAGTACAAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
ENST00000454688.5
CDS CCA 72 bp GTGATGGTACAAGATGAGCTATACTATGTGTGGCTGTaGCCTGTGTTTGCGTTTGCTGATCTTCAAAGGCAT +
Preference number: 6 (lower is better)
Translates to: VMVQDELYYVWL*PVFAFADLQRH
Trigger: ATGCCTTTGAAGATCAGCAAACGCAAACACAGGCCACAGCCACACATAGTATAGCTCATCTTGTACCATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS CAA 90 bp GGTGAGAAAAATGGCTCAGACTGTTGCTTCTTCACTTTAAAAAGTTaGGTGGAGCTCTTGTTTGCCAACAGTAGCCTATGGTGGCACTTG +
Preference number: 6 (lower is better)
Translates to: GEKNGSDCCFFTLKS*VELLFANSSLWWHL
Trigger: CAAGTGCCACCATAGGCTACTGTTGGCAAACAAGAGCTCCACCAAACTTTTTAAAGTGAAGAAGCAACAGTCTGAGCCATTTTTCTCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000477428.5
CDS TCA 72 bp GCCATCAGGGTTACTAAAAGTCTGGACTACAGTCTGTaGTGGTACAAGATGAGCTATACTATGTGTGGCTGT +
Preference number: 6 (lower is better)
Translates to: AIRVTKSLDYSL*WYKMSYTMCGC
Trigger: ACAGCCACACATAGTATAGCTCATCTTGTACCATCACAGACTGTAGTCCAGACTTTTAGTAACCCTGATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
CDS GCA 72 bp AACGTGGCTCGAAGTTTCCGAAGCAAACGTGTTTGTTaGCTCTTCCGGATAGATGGATTAGACTCAAATACA +
Preference number: 6 (lower is better)
Translates to: NVARSFRSKRVC*LFRIDGLDSNT
Trigger: TGTATTTGAGTCTAATCCATCTATCCGGAAGAGGCAACAAACACGTTTGCTTCGGAAACTTCGAGCCACGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223190.8
ENST00000311967.6
ENST00000353868.5
ENST00000393230.6
ENST00000393232.6
ENST00000454688.5