RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NRCAM (Homo sapiens)

Ensembl gene IDs: ENSG00000091129

Ensembl transcript IDs: ENST00000351718.8, ENST00000379022.8, ENST00000379024.8, ENST00000379028.8, ENST00000413765.6, ENST00000417701.5, ENST00000418239.1, ENST00000419936.5, ENST00000442580.5, ENST00000445634.2, ENST00000456431.5, ENST00000465585.1, ENST00000489800.1, ENST00000522550.2, ENST00000613830.4

Found 894 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTAGACAATGACAGTAATCTAGGACCCAGAATGGACTGGACCAGCTaGTACAGAATGCACGATGTTGTGGAATGCTTAATATCTGAAGGC +
Preference number: 1 (lower is better)
Translates to: LDNDSNLGPRMDWTS*YRMHDVVECLISEG
Trigger: GCCTTCAGATATTAAGCATTCCACAACATCGTGCATTCTGTATCAGCTGGTCCAGTCCATTCTGGGTCCTAGATTACTGTCATTGTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
3UTR GCA 90 bp GCTTTACCTACATATATCAAACATGCCAGGTTACTAGGCCTACTGTaGCCCATAGGCAAAGCTCTGAAGATTTCATCGAAAAATCTGCTG +
Preference number: 1 (lower is better)
Translates to: ALPTYIKHARLLGLL*PIGKALKISSKNLL
Trigger: CAGCAGATTTTTCGATGAAATCTTCAGAGCTTTGCCTATGGGGCACAGTAGGCCTAGTAACCTGGCATGTTTGATATATGTAGGTAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
3UTR CCA 90 bp GGAAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTaGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAG +
Preference number: 1 (lower is better)
Translates to: GNPVTFACTITYTIT*TFTLNWEHKLQKRE
Trigger: CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR TCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTATGGACTGGACCAGCTaGTACAGAATGCACGATGTT +
Preference number: 2 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPMDWTS*YRMHDV
Trigger: AACATCGTGCATTCTGTATCAGCTGGTCCAGTCCAT...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR CCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTTGCTGCTGTAATGCCTaGAAGATTAAGAAGCCTACG +
Preference number: 2 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPCCCNA*KIKKPT
Trigger: CGTAGGCTTCTTAATCTTCCAGGCATTACAGCAGCA...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR TCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACATGGACTGGACCAGCTaGTACAGAATGCACGATGTT +
Preference number: 2 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHMDWTS*YRMHDV
Trigger: AACATCGTGCATTCTGTATCAGCTGGTCCAGTCCAT...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR GCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATCACGATGTTGTGGAATaGTTAATATCTGAAGGCACT +
Preference number: 2 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDHDVVE*LISEGT
Trigger: AGTGCCTTCAGATATTAAGCATTCCACAACATCGTG...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR CCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCTGCTGCTGTAATGCCTaGAAGATTAAGAAGCCTACG +
Preference number: 2 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTCCCNA*KIKKPT
Trigger: CGTAGGCTTCTTAATCTTCCAGGCATTACAGCAGCA...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR TCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGGAATGCTTAATATCTaGAGGCACTGTATGTGTCTT +
Preference number: 2 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPGMLNI*RHCMCL
Trigger: AAGACACATACAGTGCCTTCAGATATTAAGCATTCC...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR TCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACAATCTTTGTGCTCTCTaGTGCCAAGGCAAACCTGTT +
Preference number: 2 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHNLCAL*CQGKPV
Trigger: AACAGGTTTGCCTTGGCATCAGAGAGCACAAAGATT...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR GCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTCACGATGTTGTGGAATaGTTAATATCTGAAGGCACT +
Preference number: 2 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPHDVVE*LISEGT
Trigger: AGTGCCTTCAGATATTAAGCATTCCACAACATCGTG...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR GCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACTTACTAGGCCTACTGTaGCCCATAGGCAAAGCTCTG +
Preference number: 2 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYLLGLL*PIGKAL
Trigger: CAGAGCTTTGCCTATGGGGCACAGTAGGCCTAGTAA...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR TCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTTGTCCACAAAGACATTaGAGTTCTAGAGAATACTAC +
Preference number: 2 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPCPQRH*SSREYY
Trigger: GTAGTATTCTCTAGAACTTCAATGTCTTTGTGGACA...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR TCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACATGGACTGGACCAGCTaGTACAGAATGCACGATGTT +
Preference number: 2 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYMDWTS*YRMHDV
Trigger: AACATCGTGCATTCTGTATCAGCTGGTCCAGTCCAT...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR GCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACTCAGTATGGCACAAATaGCGAAATGCACTGCAATAC +
Preference number: 2 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHSVWHK*RNALQY
Trigger: GTATTGCAGTGCATTTCGGCATTTGTGCCATACTGA...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR GCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTCACAAAATCATCATGTaGTTCAGTTGGCAACAAAGA +
Preference number: 2 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPHKIIM*FSWQQR
Trigger: TCTTTGTTGCCAACTGAAGCACATGATGATTTTGTG...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR CCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGGCAGATGTAATCCCTTaGACCGTTGGCCTTTTAAGC +
Preference number: 2 (lower is better)
Translates to: TITWTFTLNWEHKLQKREADVIP*TVGLLS
Trigger: GCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGC...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR TCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACTTTCATGCATCATATTaGACTGTATCCTGCAGAGGA +
Preference number: 2 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHFHASY*TVSCRG
Trigger: TCCTCTGCAGGATACAGTTCAATATGATGCATGAAA...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR TCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGAATCTTTGTGCTCTCTaGTGCCAAGGCAAACCTGTT +
Preference number: 2 (lower is better)
Translates to: TITWTFTLNWEHKLQKRENLCAL*CQGKPV
Trigger: AACAGGTTTGCCTTGGCATCAGAGAGCACAAAGATT...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR GCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCAAAAGTAGAACACTGTaGTGCTGTAATGCCTGGAAG +
Preference number: 2 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTKSRTL*CCNAWK
Trigger: CTTCCAGGCATTACAGCAGCACAGTGTTCTACTTTT...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR GCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACCACGATGTTGTGGAATaGTTAATATCTGAAGGCACT +
Preference number: 2 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHHDVVE*LISEGT
Trigger: AGTGCCTTCAGATATTAAGCATTCCACAACATCGTG...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR GCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACTTCTTTTCCCAGCATTaGAGTTTTCATGAACTCTGC +
Preference number: 2 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHFFSQH*SFHELC
Trigger: GCAGAGTTCATGAAAACTGCAATGCTGGGAAAAGAA...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR CCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGTGCTGCTGTAATGCCTaGAAGATTAAGAAGCCTACG +
Preference number: 2 (lower is better)
Translates to: TITWTFTLNWEHKLQKRECCCNA*KIKKPT
Trigger: CGTAGGCTTCTTAATCTTCCAGGCATTACAGCAGCA...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR CCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACTGCTGCTGTAATGCCTaGAAGATTAAGAAGCCTACG +
Preference number: 2 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYCCCNA*KIKKPT
Trigger: CGTAGGCTTCTTAATCTTCCAGGCATTACAGCAGCA...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
3UTR CAA 90 bp GTCCACAAAGACATTGAAGTTCTAGAGAATACTACAGTAACATTCTaGACAATGAAAACGGAATTCATATATAGGGGTTCAGCTGAGGGT +
Preference number: 2 (lower is better)
Translates to: VHKDIEVLENTTVTF*TMKTEFIYRGSAEG
Trigger: ACCCTCAGCTGAACCCCTATATATGAATTCCGTTTTCATTGTCAAGAATGTTACTGTAGTATTCTCTAGAACTTCAATGTCTTTGTGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR TCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACATTTCATGCATCATATTaGACTGTATCCTGCAGAGGA +
Preference number: 2 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTFHASY*TVSCRG
Trigger: TCCTCTGCAGGATACAGTTCAATATGATGCATGAAA...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR GCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCGTGGAGCATTTTTCATaGATCATATTGAACTGTATC +
Preference number: 2 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTVEHFS*IILNCI
Trigger: GATACAGTTCAATATGATGCATGAAAAATGCTCCAC...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR GCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGTAGAACACTGTaGTGCTGTAATGCCTGGAAG +
Preference number: 2 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYKSRTL*CCNAWK
Trigger: CTTCCAGGCATTACAGCAGCACAGTGTTCTACTTTT...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR GCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGAAAAGTAGAACACTGTaGTGCTGTAATGCCTGGAAG +
Preference number: 2 (lower is better)
Translates to: TITWTFTLNWEHKLQKREKSRTL*CCNAWK
Trigger: CTTCCAGGCATTACAGCAGCACAGTGTTCTACTTTT...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR TCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACTTTCATGCATCATATTaGACTGTATCCTGCAGAGGA +
Preference number: 2 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYFHASY*TVSCRG
Trigger: TCCTCTGCAGGATACAGTTCAATATGATGCATGAAA...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR TCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGGGAATGCTTAATATCTaGAGGCACTGTATGTGTCTT +
Preference number: 2 (lower is better)
Translates to: TITWTFTLNWEHKLQKREGMLNI*RHCMCL
Trigger: AAGACACATACAGTGCCTTCAGATATTAAGCATTCC...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR GCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGGCACAAATGCCGAAATaGACTGCAATACACATTGTT +
Preference number: 2 (lower is better)
Translates to: TITWTFTLNWEHKLQKREAQMPK*TAIHIV
Trigger: AACAATGTGTATTGCAGTGCATTTCGGCATTTGTGC...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR GCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGCACGATGTTGTGGAATaGTTAATATCTGAAGGCACT +
Preference number: 2 (lower is better)
Translates to: TITWTFTLNWEHKLQKREHDVVE*LISEGT
Trigger: AGTGCCTTCAGATATTAAGCATTCCACAACATCGTG...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR GCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGTTCTTTTCCCAGCATTaGAGTTTTCATGAACTCTGC +
Preference number: 2 (lower is better)
Translates to: TITWTFTLNWEHKLQKREFFSQH*SFHELC
Trigger: GCAGAGTTCATGAAAACTGCAATGCTGGGAAAAGAA...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR GCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACATATTACTGTTGGCATaGTGTTGTATGCTTTTAGTG +
Preference number: 2 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHILLLA*CCMLLV
Trigger: CACTAAAAGCATACAACAGCATGCCAACAGTAATAT...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR TCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACTGTCCACAAAGACATTaGAGTTCTAGAGAATACTAC +
Preference number: 2 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDCPQRH*SSREYY
Trigger: GTAGTATTCTCTAGAACTTCAATGTCTTTGTGGACA...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR GCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAATGCCGAAATGCACTaGAATACACATTGTTTATGC +
Preference number: 2 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYNAEMH*NTHCLC
Trigger: GCATAAACAATGTGTATTGCAGTGCATTTCGGCATT...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR GCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACGTGGAGCATTTTTCATaGATCATATTGAACTGTATC +
Preference number: 2 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDVEHFS*IILNCI
Trigger: GATACAGTTCAATATGATGCATGAAAAATGCTCCAC...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
3UTR TCA 72 bp GACAGTAATCTAGGACCCAGAATGGACTGGACCAGCTaGTACAGAATGCACGATGTTGTGGAATGCTTAATA +
Preference number: 3 (lower is better)
Translates to: DSNLGPRMDWTS*YRMHDVVECLI
Trigger: TATTAAGCATTCCACAACATCGTGCATTCTGTATCAGCTGGTCCAGTCCATTCTGGGTCCTAGATTACTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
3UTR GCA 72 bp ACATATATCAAACATGCCAGGTTACTAGGCCTACTGTaGCCCATAGGCAAAGCTCTGAAGATTTCATCGAAA +
Preference number: 3 (lower is better)
Translates to: TYIKHARLLGLL*PIGKALKISSK
Trigger: TTTCGATGAAATCTTCAGAGCTTTGCCTATGGGGCACAGTAGGCCTAGTAACCTGGCATGTTTGATATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR CAA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCTGCAGATGTAATCCCTaGGACCGTTGGCCTTTTAAG +
Preference number: 3 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTCRCNP*DRWPFK
Trigger: CTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCA...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR CAA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCTTTTCATGCATCATATaGAACTGTATCCTGCAGAGG +
Preference number: 3 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTFSCII*NCILQR
Trigger: CCTCTGCAGGATACAGTTCAATATGATGCATGAAAA...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR CAA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTCAATTTGCATACACGTaGTTTAATGCTGCAGAGTTT +
Preference number: 3 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPQFAYT*FNAAEF
Trigger: AAACTCTGCAGCATTAAACAACGTGTATGCAAATTG...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR CAA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCACTGTTGGCATGCTGTaGTATGCTTTTAGTGTTGGA +
Preference number: 3 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTTVGML*YAFSVG
Trigger: TCCAACACTAAAAGCATACAACAGCATGCCAACAGT...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
3UTR GCA 72 bp CAAATCTGTTGCACTATTACAGAAGTGACCCTTTCATaGACAGATAAATTTCGCATCTACCAGTATGGAAGA +
Preference number: 3 (lower is better)
Translates to: QICCTITEVTLS*TDKFRIYQYGR
Trigger: TCTTCCATACTGGTAGATGCGAAATTTATCTGTGCATGAAAGGGTCACTTCTGTAATAGTGCAACAGATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
3UTR CCA 72 bp TACTTTTTAAACTGCAGATGTAATCCCTTGGACCGTTaGCCTTTTAAGCACTTGCCTGATTTCTTAGATTCT +
Preference number: 3 (lower is better)
Translates to: YFLNCRCNPLDR*PFKHLPDFLDS
Trigger: AGAATCTAAGAAATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR CAA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACATTTTCATGCATCATATaGAACTGTATCCTGCAGAGG +
Preference number: 3 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTFSCII*NCILQR
Trigger: CCTCTGCAGGATACAGTTCAATATGATGCATGAAAA...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR CAA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACACTGTTGGCATGCTGTaGTATGCTTTTAGTGTTGGA +
Preference number: 3 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYTVGML*YAFSVG
Trigger: TCCAACACTAAAAGCATACAACAGCATGCCAACAGT...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR CAA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACCAATTTGCATACACGTaGTTTAATGCTGCAGAGTTT +
Preference number: 3 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHQFAYT*FNAAEF
Trigger: AAACTCTGCAGCATTAAACAACGTGTATGCAAATTG...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR CAA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCTGGCCTTTTAAGCACTaGCCTGATTTCTTAGATTCT +
Preference number: 3 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTWPFKH*PDFLDS
Trigger: AGAATCTAAGAAATCAGGCAAGTGCTTAAAAGGCCA...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR CAA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACTTTTCATGCATCATATaGAACTGTATCCTGCAGAGG +
Preference number: 3 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYFSCII*NCILQR
Trigger: CCTCTGCAGGATACAGTTCAATATGATGCATGAAAA...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR CAA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCCATCATGTGCTTCAGTaGGCAACAAAGATTTTCTTT +
Preference number: 3 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTHHVLQ*ATKIFF
Trigger: AAAGAAAATCTTTGTTGCCAACTGAAGCACATGATG...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR CAA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACTGGCCTTTTAAGCACTaGCCTGATTTCTTAGATTCT +
Preference number: 3 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYWPFKH*PDFLDS
Trigger: AGAATCTAAGAAATCAGGCAAGTGCTTAAAAGGCCA...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
3UTR-3UTR CAA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGGCACTGCAATACACATaGTTTATGCCTAAAAACAAC +
Preference number: 3 (lower is better)
Translates to: TITWTFTLNWEHKLQKREALQYT*FMPKNN
Trigger: GTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGC...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
3UTR CCA 72 bp GTCACATTTGCCTGTACCATTACATACACCATTACTTaGACATTCACACTCAATTGGGAACATAAATTACAA +
Preference number: 3 (lower is better)
Translates to: VTFACTITYTIT*TFTLNWEHKLQ
Trigger: TTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
3UTR TCA 72 bp ATTTTTAATACCAAATCTGTTGCACTATTACAGAAGTaGCCCTTTCATGCACAGATAAATTTCGCATCTACC +
Preference number: 3 (lower is better)
Translates to: IFNTKSVALLQK*PFHAQINFAST
Trigger: GGTAGATGCGAAATTTATCTGTGCATGAAAGGGTCACTTCTGTAATAGTGCAACAGATTTGGTATTAAAAAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATGACTGCCCAGGACCCTaGACCGCCGGTGTCCTCCGT +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDDCPGP*TAGVLR
Trigger: ACGGAGGACACCGGCGGTCCAGGGTCCTGGGCAGTC...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACCGTGCTCGCACGATTCAAGGTTTTGAGTTTCAGTAACTCATTCCTGATTCAGGACTGCCCAGGACCCTaGACCGCCGGTGTCCTCCGT +
Preference number: 4 (lower is better)
Translates to: TVLARFKVLSFSNSFLIQDCPGP*TAGVLR
Trigger: ACGGAGGACACCGGCGGTCCAGGGTCCTGGGCAGTC...CTGAATCAGGAATGAGTTACTGAAACTCAAAACCTTGAATCGTGCGAGCACGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR GCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCCAGCTCTGGCGCGACTaGCCAGGACCCTGGACCGCC +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTQLWRD*PGPWTA
Trigger: GGCGGTCCAGGGTCCTGGGCAGTCGCGCCAGAGCTG...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACCAGCTCTGGCGCGACTaGCCAGGACCCTGGACCGCC +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHQLWRD*PGPWTA
Trigger: GGCGGTCCAGGGTCCTGGGCAGTCGCGCCAGAGCTG...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCGACTGCCCAGGACCCTaGACCGCCGGTGTCCTCCGT +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTDCPGP*TAGVLR
Trigger: ACGGAGGACACCGGCGGTCCAGGGTCCTGGGCAGTC...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACCCCTCCGCTCAGCTCTaGCGCGACTGCCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHPSAQL*RDCPGP
Trigger: GGGTCCTGGGCAGTCGCGCCAGAGCTGAGCGGAGGG...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCCAGCTCTGGCGCGACTaGCCAGGACCCTGGACCGCC +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTQLWRD*PGPWTA
Trigger: GGCGGTCCAGGGTCCTGGGCAGTCGCGCCAGAGCTG...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp ACATTAGTACAAACCTGTGACAGGCACCCATTTAGTTATTCTCTTCCTTTTTCTCAGCTCTGGCGCGACTaGCCAGGACCCTGGACCGCC +
Preference number: 4 (lower is better)
Translates to: TLVQTCDRHPFSYSLPFSQLWRD*PGPWTA
Trigger: GGCGGTCCAGGGTCCTGGGCAGTCGCGCCAGAGCTG...AGAAAAAGGAAGAGAATAACTAAATGGGTGCCTGTCACAGGTTTGTACTAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACGACTGCCCAGGACCCTaGACCGCCGGTGTCCTCCGT +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHDCPGP*TAGVLR
Trigger: ACGGAGGACACCGGCGGTCCAGGGTCCTGGGCAGTC...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATGCTCAGACGCCTCGCTaGGCAAGCTCTTCCCAATGC +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDAQTPR*ASSSQC
Trigger: GCATTGGGAAGAGCTTGCCCAGCGAGGCGTCTGAGC...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATTCTGTCAGGGCTGGCTaGGCCCTCCCCTTTCCCATT +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDSVRAG*ALPFPI
Trigger: AATGGGAAAGGGGAGGGCCCAGCCAGCCCTGACAGA...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTAGACTCTGTCAGGGCTaGCTGGGCCCTCCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPRLCQG*LGPPLS
Trigger: GGAAAGGGGAGGGCCCAGCCAGCCCTGACAGAGTCT...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCCGAAGCTATCCCCTCTaGCTGCTCCAGCCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTRSYPL*LLQPGG
Trigger: GCCGCCTGGCTGGAGCAGCCAGAGGGGATAGCTTCG...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATTCCCATGACTACAGCTaGCTCGGGGGCAAACCCCAT +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDSHDYS*LGGKPH
Trigger: ATGGGGTTTGCCCCCGAGCCAGCTGTAGTCATGGGA...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATGCTTTTCAGAGGTACTaGGTCCCAGTGCACCTCGGC +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDAFQRY*VPVHLG
Trigger: GCCGAGGTGCACTGGGACCCAGTACCTCTGAAAAGC...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACCGAAGCTATCCCCTCTaGCTGCTCCAGCCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHRSYPL*LLQPGG
Trigger: GCCGCCTGGCTGGAGCAGCCAGAGGGGATAGCTTCG...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATGTGTGTTTGCAGGTGTaGGGATTCGTGGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDVCLQV*GFVVAQ
Trigger: CTGAGCCACCACGAATCCTCACACCTGCAAACACAC...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp ACCGTGCTCGCACGATTCAAGGTTTTGAGTTTCAGTAACTCATTCCTGATTCAGGTGTGTTTGCAGGTGTaGGGATTCGTGGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: TVLARFKVLSFSNSFLIQVCLQV*GFVVAQ
Trigger: CTGAGCCACCACGAATCCTCACACCTGCAAACACAC...CTGAATCAGGAATGAGTTACTGAAACTCAAAACCTTGAATCGTGCGAGCACGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR GCA 90 bp ACCGTGCTCGCACGATTCAAGGTTTTGAGTTTCAGTAACTCATTCCTGATTCAGGAATCAGGGGCACTCTaGCCGCAGATAAGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: TVLARFKVLSFSNSFLIQESGAL*PQISAS
Trigger: AGAAGCGCTTATCTGCGGGCAGAGTGCCCCTGATTC...CTGAATCAGGAATGAGTTACTGAAACTCAAAACCTTGAATCGTGCGAGCACGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR GCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATACTTCAGTTTGGTGGTaGCACAGCCCTGGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDTSVWW*HSPGLC
Trigger: GCACAAGCCAGGGCTGTGGCACCACCAAACTGAAGT...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATGCTTTCGTCAAATACTaGTCAGACGCCTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDAFVKY*SDASLG
Trigger: GCCCAGCGAGGCGTCTGAGCAGTATTTGACGAAAGC...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGGTACTGGGTCCCAGTaGACCTCGGCTAAGGTACTG +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPGTGSQ*TSAKVL
Trigger: CAGTACCTTAGCCGAGGTGCACTGGGACCCAGTACC...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATGAACCAGCCCTGAGTTaGAATATCCACCTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDEPALS*NIHLPA
Trigger: AGCCGGCAGGTGGATATTGCAACTCAGGGCTGGTTC...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCATCCACCTGCCGGCTTaGCATCGCTTTGCCTGCACC +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTIHLPA*HRFACT
Trigger: GGTGCAGGCAAAGCGATGGCAAGCCGGCAGGTGGAT...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379024.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATCCAGAAACTTCAGTTTaGTGGTGCCACAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDPETSV*WCHSPG
Trigger: GCCAGGGCTGTGGCACCACCAAACTGAAGTTTCTGG...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCGCTCAGACGCCTCGCTaGGCAAGCTCTTCCCAATGC +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTAQTPR*ASSSQC
Trigger: GCATTGGGAAGAGCTTGCCCAGCGAGGCGTCTGAGC...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCTCTGTCAGGGCTGGCTaGGCCCTCCCCTTTCCCATT +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTSVRAG*ALPFPI
Trigger: AATGGGAAAGGGGAGGGCCCAGCCAGCCCTGACAGA...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACAGACTCTGTCAGGGCTaGCTGGGCCCTCCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHRLCQG*LGPPLS
Trigger: GGAAAGGGGAGGGCCCAGCCAGCCCTGACAGAGTCT...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACATTAGTACAAACCTGTGACAGGCACCCATTTAGTTATTCTCTTCCTTTTTCTCGAAGCTATCCCCTCTaGCTGCTCCAGCCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: TLVQTCDRHPFSYSLPFSRSYPL*LLQPGG
Trigger: GCCGCCTGGCTGGAGCAGCCAGAGGGGATAGCTTCG...AGAAAAAGGAAGAGAATAACTAAATGGGTGCCTGTCACAGGTTTGTACTAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR TCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATTGCCAGGCTTCATGGTaGCCAGAGGGTCTTTATCGA +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDCQASW*PEGLYR
Trigger: TCGATAAAGACCCTCTGGTCACCATGAAGCCTGGCA...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATATCGCCTGGGGTCCATaGCAGCTGAACACTTTTGTC +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDIAWGP*QLNTFV
Trigger: GACAAAAGTGTTCAGCTGTCATGGACCCCAGGCGAT...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTCCTCCCCTTTCCCATTaGCCACTCGGACATTCAGTG +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPPPLSH*PLGHSV
Trigger: CACTGAATGTCCGAGTGGTCAATGGGAAAGGGGAGG...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATAGGAGAAGGTGCCTCTaGGCTTTCGTTTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDRRRCL*AFVSFS
Trigger: GCTGAAGGAAACGAAAGCTCAGAGGCACCTTCTCCT...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTACTTCAGTTTGGTGGTaGCACAGCCCTGGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPTSVWW*HSPGLC
Trigger: GCACAAGCCAGGGCTGTGGCACCACCAAACTGAAGT...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCGGTACTGGGTCCCAGTaGACCTCGGCTAAGGTACTG +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTGTGSQ*TSAKVL
Trigger: CAGTACCTTAGCCGAGGTGCACTGGGACCCAGTACC...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGAACCAGCCCTGAGTTaGAATATCCACCTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPEPALS*NIHLPA
Trigger: AGCCGGCAGGTGGATATTGCAACTCAGGGCTGGTTC...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCGGTCCAGGAAAAGCTTaGGGGCGGTTTCCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTGPGKA*GRFPFG
Trigger: GCCAAAGGGAAACCGCCCCCAAGCTTTTCCTGGACC...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATAGGTGTGAGGATTCGTaGTGGCTCAGCCAGCACATT +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDRCEDS*WLSQHI
Trigger: AATGTGCTGGCTGAGCCACCACGAATCCTCACACCT...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGTGGTGCCACAGCCCTaGCTTGTGCATTGCATCTTC +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPVVPQP*LVHCIF
Trigger: GAAGATGCAATGCACAAGCCAGGGCTGTGGCACCAC...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTCCAGAAACTTCAGTTTaGTGGTGCCACAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPPETSV*WCHSPG
Trigger: GCCAGGGCTGTGGCACCACCAAACTGAAGTTTCTGG...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCGCTTTTCAGAGGTACTaGGTCCCAGTGCACCTCGGC +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTAFQRY*VPVHLG
Trigger: GCCGAGGTGCACTGGGACCCAGTACCTCTGAAAAGC...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAAGACTCTGTCAGGGCTaGCTGGGCCCTCCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITRLCQG*LGPPLS
Trigger: GGAAAGGGGAGGGCCCAGCCAGCCCTGACAGAGTCT...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCAGACTCTGTCAGGGCTaGCTGGGCCCTCCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTRLCQG*LGPPLS
Trigger: GGAAAGGGGAGGGCCCAGCCAGCCCTGACAGAGTCT...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATAAAATGCCATTCGGGTaGCTCGGTGGATCCCATTCC +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDKMPFG*LGGSHS
Trigger: GGAATGGGATCCACCGAGCCACCCGAATGGCATTTT...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATTTTGAGGGGCTGTaGTCCAGTATGGAGCCGCTT +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPDFEGL*SSMEPL
Trigger: AAGCGGCTCCATACTGGATCACAGCCCCTCAAAATC...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCGTGTGTTTGCAGGTGTaGGGATTCGTGGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTVCLQV*GFVVAQ
Trigger: CTGAGCCACCACGAATCCTCACACCTGCAAACACAC...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATCGCTGTCATCGTCACTaGCATCAGCTACCACTAGAT +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDRCHRH*HQLPLD
Trigger: ATCTAGTGGTAGCTGATGTCAGTGACGATGACAGCG...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp ACCGTGCTCGCACGATTCAAGGTTTTGAGTTTCAGTAACTCATTCCTGATTCAGCGCTGTCATCGTCACTaGCATCAGCTACCACTAGAT +
Preference number: 4 (lower is better)
Translates to: TVLARFKVLSFSNSFLIQRCHRH*HQLPLD
Trigger: ATCTAGTGGTAGCTGATGTCAGTGACGATGACAGCG...CTGAATCAGGAATGAGTTACTGAAACTCAAAACCTTGAATCGTGCGAGCACGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR TCA 90 bp ACCGTGCTCGCACGATTCAAGGTTTTGAGTTTCAGTAACTCATTCCTGATTCAGCAAATTATCAGGCTCTaGTCCCAGTCCTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: TVLARFKVLSFSNSFLIQQIIRL*SQSFHS
Trigger: GCTGTGGAAGGACTGGGATCAGAGCCTGATAATTTG...CTGAATCAGGAATGAGTTACTGAAACTCAAAACCTTGAATCGTGCGAGCACGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR TCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATCACACATCAGACCAATaGACCAGCCCTGAGTTGCAA +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDHTSDQ*TSPELQ
Trigger: TTGCAACTCAGGGCTGGTTCATTGGTCTGATGTGTG...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCGAATCAGGGGCACTCTaGCCGCAGATAAGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTESGAL*PQISAS
Trigger: AGAAGCGCTTATCTGCGGGCAGAGTGCCCCTGATTC...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATCTGGTAGAGTGTGTTTaGAGGTGTGAGGATTCGTGG +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDLVECV*RCEDSW
Trigger: CCACGAATCCTCACACCTGCAAACACACTCTACCAG...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATACCATGCTCCCTCTTTaGACAACTGCATATTCGGGC +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDTMLPL*TTAYSG
Trigger: GCCCGAATATGCAGTTGTGCAAAGAGGGAGCATGGT...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp ACCGTGCTCGCACGATTCAAGGTTTTGAGTTTCAGTAACTCATTCCTGATTCAGACCATGCTCCCTCTTTaGACAACTGCATATTCGGGC +
Preference number: 4 (lower is better)
Translates to: TVLARFKVLSFSNSFLIQTMLPL*TTAYSG
Trigger: GCCCGAATATGCAGTTGTGCAAAGAGGGAGCATGGT...CTGAATCAGGAATGAGTTACTGAAACTCAAAACCTTGAATCGTGCGAGCACGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR GCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCGCTTTCGTCAAATACTaGTCAGACGCCTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTAFVKY*SDASLG
Trigger: GCCCAGCGAGGCGTCTGAGCAGTATTTGACGAAAGC...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATGTAGGTGTCCTCGGATaGTTTTCAGAGGTACTGGGT +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDVGVLG*FSEVLG
Trigger: ACCCAGTACCTCTGAAAAGCATCCGAGGACACCTAC...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACATCCACCTGCCGGCTTaGCATCGCTGGGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDIHLPA*HRWACL
Trigger: GAGACAGGCCCAGCGATGGCAAGCCGGCAGGTGGAT...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379028.8
CDS-3UTR CCA 90 bp TCAACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGGGTCCAGGAAAAGCTTaGGGGCGGTTTCCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: STCIKLTFHRARTIQGFEGPGKA*GRFPFG
Trigger: GCCAAAGGGAAACCGCCCCCAAGCTTTTCCTGGACC...CTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGGTCCCATCCTCTCCTaGGGACAGCACAAGATTTTG +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPGPILS*GQHKIL
Trigger: CAAAATCTTGTGCTGTCCCCAGGAGAGGATGGGACC...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTAGGTGTGAGGATTCGTaGTGGCTCAGCCAGCACATT +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPRCEDS*WLSQHI
Trigger: AATGTGCTGGCTGAGCCACCACGAATCCTCACACCT...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCTGTCCAGAGTGGTGTTaGCCACACACGTGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTCPEWC*PHTCRS
Trigger: GGACCTACACGTGTGTGGCCAACACCACTCTGGACA...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCGTGGTGCCACAGCCCTaGCTTGTGCATTGCATCTTC +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTVVPQP*LVHCIF
Trigger: GAAGATGCAATGCACAAGCCAGGGCTGTGGCACCAC...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGAAACTTCAGTTTGGTaGTGCCACAGCCCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPETSVW*CHSPGL
Trigger: CAAGCCAGGGCTGTGGCACCACCAAACTGAAGTTTC...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCGCTCAGACGCCTCGCTaGGCAAGCTCTTCCCAATGC +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTAQTPR*ASSSQC
Trigger: GCATTGGGAAGAGCTTGCCCAGCGAGGCGTCTGAGC...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGTTTGCTCAGACGCCTCGCTaGGCAAGCTCTTCCCAATGC +
Preference number: 4 (lower is better)
Translates to: TCIKLTFHRARTIQGFEFAQTPR*ASSSQC
Trigger: GCATTGGGAAGAGCTTGCCCAGCGAGGCGTCTGAGC...AAACTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTAAGACGAGGGAGCACTaGGGACTCCTTCTGGAGTAT +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPKTREH*GLLLEY
Trigger: ATACTCCAGAAGGAGTCCCCAGTGCTCCCTCGTCTT...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTAAAATGCCATTCGGGTaGCTCGGTGGATCCCATTCC +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPKMPFG*LGGSHS
Trigger: GGAATGGGATCCACCGAGCCACCCGAATGGCATTTT...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATATCGTAAACGGGAGCTaGAGTTGGAGTAGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDIVNGS*SWSRSN
Trigger: GTTGCTCCTACTCCAACTCCAGCTCCCGTTTACGAT...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCTTGGAGACTGTTGGGTaGTGGTTGGAGGCTGTACCA +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTLETVG*WLEAVP
Trigger: TGGTACAGCCTCCAACCATCACCCAACAGTCTCCAA...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCTGCCAGGCTTCATGGTaGCCAGAGGGTCTTTATCGA +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTCQASW*PEGLYR
Trigger: TCGATAAAGACCCTCTGGTCACCATGAAGCCTGGCA...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTTCAGCCACAGGACAGTaGGGGATAAGGTGTGATCAT +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPSATGQ*GIRCDH
Trigger: ATGATCACACCTTATCCCTCACTGTCCTGTGGCTGA...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACACCCGGCAACATGCCATaGGTCTTGCTGCCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITPGNMP*VLLPWK
Trigger: CTTCCAAGGCAGCAAGACTCATGGCATGTTGCCGGG...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCAGGAATTCATGGCGTTaGCAGGAGAAGGTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTRNSWR*QEKVPL
Trigger: CAGAGGCACCTTCTCCTGTCAACGCCATGAATTCCT...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACGAATCAGGGGCACTCTaGCCGCAGATAAGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHESGAL*PQISAS
Trigger: AGAAGCGCTTATCTGCGGGCAGAGTGCCCCTGATTC...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATGCAGTCCTTCTGCAATaGACTCCAGTGAAAGCACAT +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDAVLLQ*TPVKAH
Trigger: ATGTGCTTTCACTGGAGTGCATTGCAGAAGGACTGC...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTCTGGTAGAGTGTGTTTaGAGGTGTGAGGATTCGTGG +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPLVECV*RCEDSW
Trigger: CCACGAATCCTCACACCTGCAAACACACTCTACCAG...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTACCATGCTCCCTCTTTaGACAACTGCATATTCGGGC +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPTMLPL*TTAYSG
Trigger: GCCCGAATATGCAGTTGTGCAAAGAGGGAGCATGGT...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCGCAAGCTCTTCCCAATaGTGTTCACTGCCATCACGC +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTASSSQ*CSLPSR
Trigger: GCGTGATGGCAGTGAACAGCATTGGGAAGAGCTTGC...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACGCTTTCGTCAAATACTaGTCAGACGCCTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHAFVKY*SDASLG
Trigger: GCCCAGCGAGGCGTCTGAGCAGTATTTGACGAAAGC...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTTGTACTCTGTCAAAATaGCATTCGGGTGGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPCTLSK*HSGGSV
Trigger: CACCGAGCCACCCGAATGGCATTTTGACAGAGTACA...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAGTTGCAATATCCACCTaGCGGCTTGCCATCGCTGGG +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTVAIST*RLAIAG
Trigger: CCCAGCGATGGCAAGCCGGCAGGTGGATATTGCAAC...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379028.8
CDS-3UTR GCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACATCCACCTGCCGGCTTaGCATCGCTTTGCCTGCACC +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDIHLPA*HRFACT
Trigger: GGTGCAGGCAAAGCGATGGCAAGCCGGCAGGTGGAT...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379024.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATTCTTTTGGAGACTGTTaGGTGATGGTTGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDSFGDC*VMVGGC
Trigger: ACAGCCTCCAACCATCACCCAACAGTCTCCAAAAGA...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACCGTGCTCGCACGATTCAAGGTTTTGAGTTTCAGTAACTCATTCCTGATTCAGTCTTTTGGAGACTGTTaGGTGATGGTTGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: TVLARFKVLSFSNSFLIQSFGDC*VMVGGC
Trigger: ACAGCCTCCAACCATCACCCAACAGTCTCCAAAAGA...CTGAATCAGGAATGAGTTACTGAAACTCAAAACCTTGAATCGTGCGAGCACGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCGGTCCAGGAAAAGCTTaGGGGCGGTTTCCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTGPGKA*GRFPFG
Trigger: GCCAAAGGGAAACCGCCCCCAAGCTTTTCCTGGACC...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACCGTGCTCGCACGATTCAAGGTTTTGAGTTTCAGTAACTCATTCCTGATTCAGTTCGCGGGTGTCCTCTaGGAGGACATTGGAAAAATA +
Preference number: 4 (lower is better)
Translates to: TVLARFKVLSFSNSFLIQFAGVL*EDIGKI
Trigger: TATTTTTCCAATGTCCTCCCAGAGGACACCCGCGAA...CTGAATCAGGAATGAGTTACTGAAACTCAAAACCTTGAATCGTGCGAGCACGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATGGCTGTGATCCAGTATaGAGCCGCTTTAACTCTAAC +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDGCDPV*SRFNSN
Trigger: GTTAGAGTTAAAGCGGCTCCATACTGGATCACAGCC...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCGGTCCCATCCTCTCCTaGGGACAGCACAAGATTTTG +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTGPILS*GQHKIL
Trigger: CAAAATCTTGTGCTGTCCCCAGGAGAGGATGGGACC...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTTGTGAGGATTCGTGGTaGCTCAGCCAGCACATTTAC +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPCEDSW*LSQHIY
Trigger: GTAAATGTGCTGGCTGAGCCACCACGAATCCTCACA...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCAGGTGTGAGGATTCGTaGTGGCTCAGCCAGCACATT +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTRCEDS*WLSQHI
Trigger: AATGTGCTGGCTGAGCCACCACGAATCCTCACACCT...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATAAACCACTCGATGGTTaGGAGAGGAGACCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDKPLDG*ERRPKE
Trigger: TTCTTTGGGTCTCCTCTCCCAACCATCGAGTGGTTT...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACAGACGCTGTCCAGAGTaGTGTTGGCCACACACGTGT +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHRRCPE*CWPHTC
Trigger: ACACGTGTGTGGCCAACACCACTCTGGACAGCGTCT...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACGTGGTGCCACAGCCCTaGCTTGTGCATTGCATCTTC +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHVVPQP*LVHCIF
Trigger: GAAGATGCAATGCACAAGCCAGGGCTGTGGCACCAC...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TCAACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGGTGGTGCCACAGCCCTaGCTTGTGCATTGCATCTTC +
Preference number: 4 (lower is better)
Translates to: STCIKLTFHRARTIQGFEVVPQP*LVHCIF
Trigger: GAAGATGCAATGCACAAGCCAGGGCTGTGGCACCAC...CTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACGCTCAGACGCCTCGCTaGGCAAGCTCTTCCCAATGC +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDAQTPR*ASSSQC
Trigger: GCATTGGGAAGAGCTTGCCCAGCGAGGCGTCTGAGC...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACCGTGCTCGCACGATTCAAGGTTTTGAGTTTCAGTAACTCATTCCTGATTCAGGTCCTTCCACAGCTGTaGGGTTTTTATCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: TVLARFKVLSFSNSFLIQVLPQL*GFYLVL
Trigger: CAGAACCAGATAAAAACCCCACAGCTGTGGAAGGAC...CTGAATCAGGAATGAGTTACTGAAACTCAAAACCTTGAATCGTGCGAGCACGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCTCCCATGACTACAGCTaGCTCGGGGGCAAACCCCAT +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTSHDYS*LGGKPH
Trigger: ATGGGGTTTGCCCCCGAGCCAGCTGTAGTCATGGGA...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACATCCCATGACTACAGCTaGCTCGGGGGCAAACCCCAT +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITSHDYS*LGGKPH
Trigger: ATGGGGTTTGCCCCCGAGCCAGCTGTAGTCATGGGA...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACTCTGTCAGGGCTGGCTaGGCCCTCCCCTTTCCCATT +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDSVRAG*ALPFPI
Trigger: AATGGGAAAGGGGAGGGCCCAGCCAGCCCTGACAGA...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCAAGACGAGGGAGCACTaGGGACTCCTTCTGGAGTAT +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTKTREH*GLLLEY
Trigger: ATACTCCAGAAGGAGTCCCCAGTGCTCCCTCGTCTT...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCATTCGGGTGGCTCGGTaGATCCCATTCCAAAGTGAG +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTIRVAR*IPFQSE
Trigger: CTCACTTTGGAATGGGATCCACCGAGCCACCCGAAT...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATCCATCCTCATTGAACTaGCCATTAACCCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDPSSLN*PLTPSP
Trigger: TGGAGAAGGGGTTAATGGCCAGTTCAATGAGGATGG...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATAATCCCTTGGACCGTTaGCCTTTTAAGCACTTGCCT +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDNPLDR*PFKHLP
Trigger: AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATT...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGTCAAAGGGAGGATTTaGGACATCGTAAACGGGAGC +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPVKGRI*DIVNGS
Trigger: GCTCCCGTTTACGATGTCCCAAATCCTCCCTTTGAC...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCCCGGCTTGCCATCGCTaGGCCTGTCTCAAACACATC +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTPACHR*ACLKHI
Trigger: GATGTGTTTGAGACAGGCCCAGCGATGGCAAGCCGG...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379028.8
CDS-3UTR TCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATTTATCGATGTCAAAATaGGTCCCATTACGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDLSMSK*VPLRVQ
Trigger: CTGGACCCGTAATGGGACTCATTTTGACATCGATAA...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACTGCCAGGCTTCATGGTaGCCAGAGGGTCTTTATCGA +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHCQASW*PEGLYR
Trigger: TCGATAAAGACCCTCTGGTCACCATGAAGCCTGGCA...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCCAGGCCTGTTTGCAATaGCCTGGTAGAGTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTQACLQ*PGRVCL
Trigger: CAAACACACTCTACCAGGTCATTGCAAACAGGCCTG...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp ACCGTGCTCGCACGATTCAAGGTTTTGAGTTTCAGTAACTCATTCCTGATTCAGTCAGCTACCACTAGATaGTCCTTGTCAACAGTGAAC +
Preference number: 4 (lower is better)
Translates to: TVLARFKVLSFSNSFLIQSATTR*SLSTVN
Trigger: GTTCACTGTTGACAAGGATCATCTAGTGGTAGCTGA...CTGAATCAGGAATGAGTTACTGAAACTCAAAACCTTGAATCGTGCGAGCACGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR TCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACATCGCCTGGGGTCCATaGCAGCTGAACACTTTTGTC +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHIAWGP*QLNTFV
Trigger: GACAAAAGTGTTCAGCTGTCATGGACCCCAGGCGAT...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCCAAATTATCAGGCTCTaGTCCCAGTCCTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTQIIRL*SQSFHS
Trigger: GCTGTGGAAGGACTGGGATCAGAGCCTGATAATTTG...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTTCAGGGCCTGAACTTTaGTCAGGTATGGAACAAAGG +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPSGPEL*SGMEQR
Trigger: CCTTTGTTCCATACCTGATCAAAGTTCAGGCCCTGA...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACCCCGGCAACATGCCATaGGTCTTGCTGCCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDPGNMP*VLLPWK
Trigger: CTTCCAAGGCAGCAAGACTCATGGCATGTTGCCGGG...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACACCTCCCCTTTCCCATTaGCCACTCGGACATTCAGTG +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTPPLSH*PLGHSV
Trigger: CACTGAATGTCCGAGTGGTCAATGGGAAAGGGGAGG...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATCCCATTCCAAAGTaGGAGAGTCCAGTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPDPIPK*ESPVLD
Trigger: ATCCAACACTGGACTCTCTCACTTTGGAATGGGATC...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATGCTTCCTCTGTAATTTaGCTTCCTGATCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDASSVI*LPDPAD
Trigger: ATCAGCAGGATCAGGAAGTCAAATTACAGAGGAAGC...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACAGGAGAAGGTGCCTCTaGGCTTTCGTTTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHRRRCL*AFVSFS
Trigger: GCTGAAGGAAACGAAAGCTCAGAGGCACCTTCTCCT...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATCTTTTCTCAGGAGAATaGCAACAGCTAAGACCAGCT +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDLFSGE*QQLRPA
Trigger: AGCTGGTCTTAGCTGTTGGCATTCTCCTGAGAAAAG...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCTCCGCGTTCGTTCCTTaGTGTACACTGATAGACTCC +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTSAFVP*CTLIDS
Trigger: GGAGTCTATCAGTGTACAGCAAGGAACGAACGCGGA...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp ACCGTGCTCGCACGATTCAAGGTTTTGAGTTTCAGTAACTCATTCCTGATTCAGATCCAATTGGGGGTCTaGAGGGAAGTACTAAAGACT +
Preference number: 4 (lower is better)
Translates to: TVLARFKVLSFSNSFLIQIQLGV*REVLKT
Trigger: AGTCTTTAGTACTTCCCTGCAGACCCCCAATTGGAT...CTGAATCAGGAATGAGTTACTGAAACTCAAAACCTTGAATCGTGCGAGCACGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR GCA 90 bp ACCGTGCTCGCACGATTCAAGGTTTTGAGTTTCAGTAACTCATTCCTGATTCAGCCCTCTTTGCACAACTaGATATTCGGGCTGTTTAAC +
Preference number: 4 (lower is better)
Translates to: TVLARFKVLSFSNSFLIQPSLHN*IFGLFN
Trigger: GTTAAACAGCCCGAATATGCAGTTGTGCAAAGAGGG...CTGAATCAGGAATGAGTTACTGAAACTCAAAACCTTGAATCGTGCGAGCACGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR GCA 90 bp ACCGTGCTCGCACGATTCAAGGTTTTGAGTTTCAGTAACTCATTCCTGATTCAGATTCAAAGGACACCATaGTCCCTCTTTGCACAACTG +
Preference number: 4 (lower is better)
Translates to: TVLARFKVLSFSNSFLIQIQRTP*SLFAQL
Trigger: CAGTTGTGCAAAGAGGGAGCATGGTGTCCTTTGAAT...CTGAATCAGGAATGAGTTACTGAAACTCAAAACCTTGAATCGTGCGAGCACGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR GCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTCACAGCCCTGGCTTGTaGATTGCATCTTCATATTCG +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPHSPGL*IASSYS
Trigger: CGAATATGAAGATGCAATGCACAAGCCAGGGCTGTG...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACTTCAGTTTGGTGGTaGCACAGCCCTGGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTTSVWW*HSPGLC
Trigger: GCACAAGCCAGGGCTGTGGCACCACCAAACTGAAGT...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp ACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGTTTACTTCAGTTTGGTGGTaGCACAGCCCTGGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: TCIKLTFHRARTIQGFEFTSVWW*HSPGLC
Trigger: GCACAAGCCAGGGCTGTGGCACCACCAAACTGAAGT...AAACTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR GCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCGCTTTCGTCAAATACTaGTCAGACGCCTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTAFVKY*SDASLG
Trigger: GCCCAGCGAGGCGTCTGAGCAGTATTTGACGAAAGC...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp ACATTAGTACAAACCTGTGACAGGCACCCATTTAGTTATTCTCTTCCTTTTTCTGCTTTCGTCAAATACTaGTCAGACGCCTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TLVQTCDRHPFSYSLPFSAFVKY*SDASLG
Trigger: GCCCAGCGAGGCGTCTGAGCAGTATTTGACGAAAGC...AGAAAAAGGAAGAGAATAACTAAATGGGTGCCTGTCACAGGTTTGTACTAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR GCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACGGTACTGGGTCCCAGTaGACCTCGGCTAAGGTACTG +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDGTGSQ*TSAKVL
Trigger: CAGTACCTTAGCCGAGGTGCACTGGGACCCAGTACC...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCTGTACTCTGTCAAAATaGCATTCGGGTGGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTCTLSK*HSGGSV
Trigger: CACCGAGCCACCCGAATGGCATTTTGACAGAGTACA...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAATCCACCTGCCGGCTTaGCATCGCTTCATCCACAGT +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITIHLPA*HRFIHS
Trigger: ACTGTGGATGAAGCGATGGCAAGCCGGCAGGTGGAT...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000351718.8
CDS-3UTR GCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAGAACCAGCCCTGAGTTaGAATATCCACCTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTEPALS*NIHLPA
Trigger: AGCCGGCAGGTGGATATTGCAACTCAGGGCTGGTTC...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCTTACTAGGCCTACTGTaGCCCATAGGCAAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTLLGLL*PIGKAL
Trigger: CAGAGCTTTGCCTATGGGGCACAGTAGGCCTAGTAA...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACTGCCATCGCTTTGCCTaGACCTACATCAGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHCHRFA*TYIRWK
Trigger: CTTCCACCTGATGTAGGTGCAGGCAAAGCGATGGCA...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413765.6
CDS-3UTR CCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGGGTCCAGGAAAAGCTTaGGGGCGGTTTCCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKREGPGKA*GRFPFG
Trigger: GCCAAAGGGAAACCGCCCCCAAGCTTTTCCTGGACC...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATCTAACAGAAATGGTATaGTGGATGGCTCCTAATGCG +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDLTEMV*WMAPNA
Trigger: CGCATTAGGAGCCATCCACCATACCATTTCTGTTAG...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TCAACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGGGTCCCATCCTCTCCTaGGGACAGCACAAGATTTTG +
Preference number: 4 (lower is better)
Translates to: STCIKLTFHRARTIQGFEGPILS*GQHKIL
Trigger: CAAAATCTTGTGCTGTCCCCAGGAGAGGATGGGACC...CTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCTGTGAGGATTCGTGGTaGCTCAGCCAGCACATTTAC +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTCEDSW*LSQHIY
Trigger: GTAAATGTGCTGGCTGAGCCACCACGAATCCTCACA...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACCGTGCTCGCACGATTCAAGGTTTTGAGTTTCAGTAACTCATTCCTGATTCAGCCTGTACTGTCCTTTTaGGCCACAGGAATTTCCAAA +
Preference number: 4 (lower is better)
Translates to: TVLARFKVLSFSNSFLIQPVLSF*ATGISK
Trigger: TTTGGAAATTCCTGTGGCCCAAAAGGACAGTACAGG...CTGAATCAGGAATGAGTTACTGAAACTCAAAACCTTGAATCGTGCGAGCACGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp ACCATCCTCTCAAAACACATAATGACTTTGCCTTTAGATGGACTCAAACCTAATTGTCCAGAGTGGTGTTaGCCACACACGTGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: TILSKHIMTLPLDGLKPNCPEWC*PHTCRS
Trigger: GGACCTACACGTGTGTGGCCAACACCACTCTGGACA...ATTAGGTTTGAGTCCATCTAAAGGCAAAGTCATTATGTGTTTTGAGAGGATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAAGACGCTGTCCAGAGTaGTGTTGGCCACACACGTGT +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTRRCPE*CWPHTC
Trigger: ACACGTGTGTGGCCAACACCACTCTGGACAGCGTCT...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAAGACGCTGTCCAGAGTaGTGTTGGCCACACACGTGT +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITRRCPE*CWPHTC
Trigger: ACACGTGTGTGGCCAACACCACTCTGGACAGCGTCT...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGTTTAGACGCTGTCCAGAGTaGTGTTGGCCACACACGTGT +
Preference number: 4 (lower is better)
Translates to: TCIKLTFHRARTIQGFEFRRCPE*CWPHTC
Trigger: ACACGTGTGTGGCCAACACCACTCTGGACAGCGTCT...AAACTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACACCAGAAACTTCAGTTTaGTGGTGCCACAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITPETSV*WCHSPG
Trigger: GCCAGGGCTGTGGCACCACCAAACTGAAGTTTCTGG...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGTTTCCAGAAACTTCAGTTTaGTGGTGCCACAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: TCIKLTFHRARTIQGFEFPETSV*WCHSPG
Trigger: GCCAGGGCTGTGGCACCACCAAACTGAAGTTTCTGG...AAACTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGTCCTTCCACAGCTGTaGGGTTTTTATCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPVLPQL*GFYLVL
Trigger: CAGAACCAGATAAAAACCCCACAGCTGTGGAAGGAC...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATTTTGTACTGAAGGCCTaGCCCATTAGATTCGAAACC +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDFVLKA*PIRFET
Trigger: GGTTTCGAATCTAATGGGCCAGGCCTTCAGTACAAA...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACTCCCATGACTACAGCTaGCTCGGGGGCAAACCCCAT +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYSHDYS*LGGKPH
Trigger: ATGGGGTTTGCCCCCGAGCCAGCTGTAGTCATGGGA...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGGCTTTTCAGAGGTACTaGGTCCCAGTGCACCTCGGC +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKREAFQRY*VPVHLG
Trigger: GCCGAGGTGCACTGGGACCCAGTACCTCTGAAAAGC...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATACTGGGGACTCCTTCTaGAGTATTAAAGACTCTGTC +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDTGDSF*SIKDSV
Trigger: GACAGAGTCTTTAATACTCCAGAAGGAGTCCCCAGT...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTTCTTCCTTCATAGGCTaGATTTCAGGGTCAGCATGG +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPSSFIG*ISGSAW
Trigger: CCATGCTGACCCTGAAATCCAGCCTATGAAGGAAGA...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCCTGTTGGGTGATGGTTaGAGGCTGTACCAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTLLGDG*RLYQVF
Trigger: GAAGACTTGGTACAGCCTCCAACCATCACCCAACAG...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCATCGTAAACGGGAGCTaGAGTTGGAGTAGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTIVNGS*SWSRSN
Trigger: GTTGCTCCTACTCCAACTCCAGCTCCCGTTTACGAT...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp ACATTAGTACAAACCTGTGACAGGCACCCATTTAGTTATTCTCTTCCTTTTTCTTTGGAGACTGTTGGGTaGTGGTTGGAGGCTGTACCA +
Preference number: 4 (lower is better)
Translates to: TLVQTCDRHPFSYSLPFSLETVG*WLEAVP
Trigger: TGGTACAGCCTCCAACCATCACCCAACAGTCTCCAA...AGAAAAAGGAAGAGAATAACTAAATGGGTGCCTGTCACAGGTTTGTACTAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR TCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACATGCCAGGCTTCATGGTaGCCAGAGGGTCTTTATCGA +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITCQASW*PEGLYR
Trigger: TCGATAAAGACCCTCTGGTCACCATGAAGCCTGGCA...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp ACCATCCTCTCAAAACACATAATGACTTTGCCTTTAGATGGACTCAAACCTAATTGCCAGGCTTCATGGTaGCCAGAGGGTCTTTATCGA +
Preference number: 4 (lower is better)
Translates to: TILSKHIMTLPLDGLKPNCQASW*PEGLYR
Trigger: TCGATAAAGACCCTCTGGTCACCATGAAGCCTGGCA...ATTAGGTTTGAGTCCATCTAAAGGCAAAGTCATTATGTGTTTTGAGAGGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR TCA 90 bp ACCGTGCTCGCACGATTCAAGGTTTTGAGTTTCAGTAACTCATTCCTGATTCAGTCCCCATTCAAACCTTaGGAAACTCTCTCACTTTGT +
Preference number: 4 (lower is better)
Translates to: TVLARFKVLSFSNSFLIQSPFKP*ETLSLC
Trigger: ACAAAGTGAGAGAGTTTCTCAAGGTTTGAATGGGGA...CTGAATCAGGAATGAGTTACTGAAACTCAAAACCTTGAATCGTGCGAGCACGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR TCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCGATTTTGAGGGGCTGTaGTCCAGTATGGAGCCGCTT +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTDFEGL*SSMEPL
Trigger: AAGCGGCTCCATACTGGATCACAGCCCCTCAAAATC...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAGATTTTGAGGGGCTGTaGTCCAGTATGGAGCCGCTT +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTDFEGL*SSMEPL
Trigger: AAGCGGCTCCATACTGGATCACAGCCCCTCAAAATC...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp ACATTAGTACAAACCTGTGACAGGCACCCATTTAGTTATTCTCTTCCTTTTTCTGATTTTGAGGGGCTGTaGTCCAGTATGGAGCCGCTT +
Preference number: 4 (lower is better)
Translates to: TLVQTCDRHPFSYSLPFSDFEGL*SSMEPL
Trigger: AAGCGGCTCCATACTGGATCACAGCCCCTCAAAATC...AGAAAAAGGAAGAGAATAACTAAATGGGTGCCTGTCACAGGTTTGTACTAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR TCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGGTGTGTTTGCAGGTGTaGGGATTCGTGGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKREVCLQV*GFVVAQ
Trigger: CTGAGCCACCACGAATCCTCACACCTGCAAACACAC...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATGTGAGGGATAAGGTGTaGTCATGTTTCACTTTGCAT +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDVRDKV*SCFTLH
Trigger: ATGCAAAGTGAAACATGATCACACCTTATCCCTCAC...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCGATCCTTGTCAACAGTaGACCTTTCATCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTDPCQQ*TFHHWA
Trigger: TGCCCAGTGATGAAAGGTTCACTGTTGACAAGGATC...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACCGCTGTCATCGTCACTaGCATCAGCTACCACTAGAT +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHRCHRH*HQLPLD
Trigger: ATCTAGTGGTAGCTGATGTCAGTGACGATGACAGCG...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCATCGCCTGGGGTCCATaGCAGCTGAACACTTTTGTC +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTIAWGP*QLNTFV
Trigger: GACAAAAGTGTTCAGCTGTCATGGACCCCAGGCGAT...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp ACATTAGTACAAACCTGTGACAGGCACCCATTTAGTTATTCTCTTCCTTTTTCTATCGCCTGGGGTCCATaGCAGCTGAACACTTTTGTC +
Preference number: 4 (lower is better)
Translates to: TLVQTCDRHPFSYSLPFSIAWGP*QLNTFV
Trigger: GACAAAAGTGTTCAGCTGTCATGGACCCCAGGCGAT...AGAAAAAGGAAGAGAATAACTAAATGGGTGCCTGTCACAGGTTTGTACTAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR TCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACCAAATTATCAGGCTCTaGTCCCAGTCCTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHQIIRL*SQSFHS
Trigger: GCTGTGGAAGGACTGGGATCAGAGCCTGATAATTTG...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCTCAGGGCCTGAACTTTaGTCAGGTATGGAACAAAGG +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTSGPEL*SGMEQR
Trigger: CCTTTGTTCCATACCTGATCAAAGTTCAGGCCCTGA...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTTGCTGCCTTGGAAGGTaGGGATCTTTTTCTCAATGT +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPCCLGR*GSFSQC
Trigger: ACATTGAGAAAAAGATCCTCACCTTCCAAGGCAGCA...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACCCTCCCCTTTCCCATTaGCCACTCGGACATTCAGTG +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYPPLSH*PLGHSV
Trigger: CACTGAATGTCCGAGTGGTCAATGGGAAAGGGGAGG...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCGATCCCATTCCAAAGTaGGAGAGTCCAGTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTDPIPK*ESPVLD
Trigger: ATCCAACACTGGACTCTCTCACTTTGGAATGGGATC...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGCTTCCTCTGTAATTTaGCTTCCTGATCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPASSVI*LPDPAD
Trigger: ATCAGCAGGATCAGGAAGTCAAATTACAGAGGAAGC...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCAGGAGAAGGTGCCTCTaGGCTTTCGTTTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTRRRCL*AFVSFS
Trigger: GCTGAAGGAAACGAAAGCTCAGAGGCACCTTCTCCT...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAAGGAATTCATGGCGTTaGCAGGAGAAGGTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITRNSWR*QEKVPL
Trigger: CAGAGGCACCTTCTCCTGTCAACGCCATGAATTCCT...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCATGGACTGGACCAGCTaGTACAGAATGCACGATGTT +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTMDWTS*YRMHDV
Trigger: AACATCGTGCATTCTGTATCAGCTGGTCCAGTCCAT...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACGAATCAGGGGCACTCTaGCCGCAGATAAGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDESGAL*PQISAS
Trigger: AGAAGCGCTTATCTGCGGGCAGAGTGCCCCTGATTC...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTAAGAGGTACTTCCAGTaGACTAATCATCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPKRYFQ*TNHLAQ
Trigger: CTGTGCCAGATGATTAGTGCACTGGAAGTACCTCTT...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTATCCAATTGGGGGTCTaGAGGGAAGTACTAAAGACT +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPIQLGV*REVLKT
Trigger: AGTCTTTAGTACTTCCCTGCAGACCCCCAATTGGAT...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTCCCTCTTTGCACAACTaGATATTCGGGCTGTTTAAC +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPPSLHN*IFGLFN
Trigger: GTTAAACAGCCCGAATATGCAGTTGTGCAAAGAGGG...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTATTCAAAGGACACCATaGTCCCTCTTTGCACAACTG +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPIQRTP*SLFAQL
Trigger: CAGTTGTGCAAAGAGGGAGCATGGTGTCCTTTGAAT...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACACTTCAGTTTGGTGGTaGCACAGCCCTGGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDTSVWW*HSPGLC
Trigger: GCACAAGCCAGGGCTGTGGCACCACCAAACTGAAGT...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAGCAAGCTCTTCCCAATaGTGTTCACTGCCATCACGC +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITASSSQ*CSLPSR
Trigger: GCGTGATGGCAGTGAACAGCATTGGGAAGAGCTTGC...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp ACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGTTTGCAAGCTCTTCCCAATaGTGTTCACTGCCATCACGC +
Preference number: 4 (lower is better)
Translates to: TCIKLTFHRARTIQGFEFASSSQ*CSLPSR
Trigger: GCGTGATGGCAGTGAACAGCATTGGGAAGAGCTTGC...AAACTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR GCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAGTTGCAATATCCACCTaGCGGCTTGCCATCGCTTCA +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITVAIST*RLAIAS
Trigger: TGAAGCGATGGCAAGCCGGCAGGTGGATATTGCAAC...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000351718.8
CDS-3UTR GCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTCCAGCTGATACAGAATaGACGATGTTGTGGAATGCT +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPPADTE*TMLWNA
Trigger: AGCATTCCACAACATCGTGCATTCTGTATCAGCTGG...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACATGCCATCGCTTTGCCTaGACCTACATCAGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTCHRFA*TYIRWK
Trigger: CTTCCACCTGATGTAGGTGCAGGCAAAGCGATGGCA...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379024.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACGGCTTGCCATCGCTTTaGCTGCACCTACATCAGGTG +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDGLPSL*LHLHQV
Trigger: CACCTGATGTAGGTGCAGGCAAAGCGATGGCAAGCC...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379024.8
ENST00000413765.6
CDS-3UTR GCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACGGCTTGCCATCGCTTTaGCTGCACCTACATCAGGTG +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYGLPSL*LHLHQV
Trigger: CACCTGATGTAGGTGCAGGCAAAGCGATGGCAAGCC...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413765.6
CDS-3UTR GCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAGTTGCAATATCCACCTaGCGGCTTGCCATCGCTTTG +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITVAIST*RLAIAL
Trigger: CAAAGCGATGGCAAGCCGGCAGGTGGATATTGCAAC...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379024.8
ENST00000413765.6
CDS-3UTR GCA 90 bp ACCGTGCTCGCACGATTCAAGGTTTTGAGTTTCAGTAACTCATTCCTGATTCAGATTGACATTTCACCGTaGTCGCACGATTCAAGGTTT +
Preference number: 4 (lower is better)
Translates to: TVLARFKVLSFSNSFLIQIDISP*SHDSRF
Trigger: AAACCTTGAATCGTGCGAGCACGGTGAAATGTCAAT...CTGAATCAGGAATGAGTTACTGAAACTCAAAACCTTGAATCGTGCGAGCACGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACCTTCAGAAGGTCCACTaGGCTAGACACCTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHLQKVH*ARHLPN
Trigger: ATTTGGGAGGTGTCTAGCCCAGTGGACCTTCTGAAG...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACCTGTTGGGTGATGGTTaGAGGCTGTACCAGATCAAG +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHLLGDG*RLYQIK
Trigger: CTTGATCTGGTACAGCCTCCAACCATCACCCAACAG...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351718.8
CDS-3UTR CCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACGGGGCGGTTTCCCTTTaGCTTCACACTGGATTACAA +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHGAVSL*LHTGLQ
Trigger: TTGTAATCCAGTGTGAAGCCAAAGGGAAACCGCCCC...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TCAACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGGGGGCGGTTTCCCTTTaGCTTCACACTGGATTACAA +
Preference number: 4 (lower is better)
Translates to: STCIKLTFHRARTIQGFEGAVSL*LHTGLQ
Trigger: TTGTAATCCAGTGTGAAGCCAAAGGGAAACCGCCCC...CTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCGGTCCCATCCTCTCCTaGGGACAGCACAAGATTTTG +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTGPILS*GQHKIL
Trigger: CAAAATCTTGTGCTGTCCCCAGGAGAGGATGGGACC...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAGGTCCCATCCTCTCCTaGGGACAGCACAAGATTTTG +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITGPILS*GQHKIL
Trigger: CAAAATCTTGTGCTGTCCCCAGGAGAGGATGGGACC...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGTTTAGGTGTGAGGATTCGTaGTGGCTCAGCCAGCACATT +
Preference number: 4 (lower is better)
Translates to: TCIKLTFHRARTIQGFEFRCEDS*WLSQHI
Trigger: AATGTGCTGGCTGAGCCACCACGAATCCTCACACCT...AAACTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCAAACCACTCGATGGTTaGGAGAGGAGACCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTKPLDG*ERRPKE
Trigger: TTCTTTGGGTCTCCTCTCCCAACCATCGAGTGGTTT...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTCCTGTACTGTCCTTTTaGGCCACAGGAATTTCCAAA +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPPVLSF*ATGISK
Trigger: TTTGGAAATTCCTGTGGCCCAAAAGGACAGTACAGG...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGTGTCCAGAGTGGTGTTaGCCACACACGTGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKRECPEWC*PHTCRS
Trigger: GGACCTACACGTGTGTGGCCAACACCACTCTGGACA...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACTGTCCAGAGTGGTGTTaGCCACACACGTGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYCPEWC*PHTCRS
Trigger: GGACCTACACGTGTGTGGCCAACACCACTCTGGACA...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACAGACGCTGTCCAGAGTaGTGTTGGCCACACACGTGT +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDRRCPE*CWPHTC
Trigger: ACACGTGTGTGGCCAACACCACTCTGGACAGCGTCT...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGGTGGTGCCACAGCCCTaGCTTGTGCATTGCATCTTC +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKREVVPQP*LVHCIF
Trigger: GAAGATGCAATGCACAAGCCAGGGCTGTGGCACCAC...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAGAAACTTCAGTTTGGTaGTGCCACAGCCCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITETSVW*CHSPGL
Trigger: CAAGCCAGGGCTGTGGCACCACCAAACTGAAGTTTC...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACCATCCTCTCAAAACACATAATGACTTTGCCTTTAGATGGACTCAAACCTAATGAAACTTCAGTTTGGTaGTGCCACAGCCCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: TILSKHIMTLPLDGLKPNETSVW*CHSPGL
Trigger: CAAGCCAGGGCTGTGGCACCACCAAACTGAAGTTTC...ATTAGGTTTGAGTCCATCTAAAGGCAAAGTCATTATGTGTTTTGAGAGGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCGTCCTTCCACAGCTGTaGGGTTTTTATCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTVLPQL*GFYLVL
Trigger: CAGAACCAGATAAAAACCCCACAGCTGTGGAAGGAC...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTAACTTTGATCAGGTATaGAACAAAGGTTGGCGTGCC +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPNFDQV*NKGWRA
Trigger: GGCACGCCAACCTTTGTTCCATACCTGATCAAAGTT...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTACTGGGGACTCCTTCTaGAGTATTAAAGACTCTGTC +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPTGDSF*SIKDSV
Trigger: GACAGAGTCTTTAATACTCCAGAAGGAGTCCCCAGT...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAAAGACGAGGGAGCACTaGGGACTCCTTCTGGAGTAT +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITKTREH*GLLLEY
Trigger: ATACTCCAGAAGGAGTCCCCAGTGCTCCCTCGTCTT...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCAAGACGAGGGAGCACTaGGGACTCCTTCTGGAGTAT +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTKTREH*GLLLEY
Trigger: ATACTCCAGAAGGAGTCCCCAGTGCTCCCTCGTCTT...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAATTCGGGTGGCTCGGTaGATCCCATTCCAAAGTGAG +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTIRVAR*IPFQSE
Trigger: CTCACTTTGGAATGGGATCCACCGAGCCACCCGAAT...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAAAAATGCCATTCGGGTaGCTCGGTGGATCCCATTCC +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITKMPFG*LGGSHS
Trigger: GGAATGGGATCCACCGAGCCACCCGAATGGCATTTT...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAAAAATGCCATTCGGGTaGCTCGGTGGATCCCATTCC +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTKMPFG*LGGSHS
Trigger: GGAATGGGATCCACCGAGCCACCCGAATGGCATTTT...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCCCATCCTCATTGAACTaGCCATTAACCCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTPSSLN*PLTPSP
Trigger: TGGAGAAGGGGTTAATGGCCAGTTCAATGAGGATGG...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCAACGGGAGCTGGAGTTaGAGTAGGAGCAACAACGCT +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTNGSWS*SRSNNA
Trigger: AGCGTTGTTGCTCCTACTCCAACTCCAGCTCCCGTT...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAAACGGGAGCTGGAGTTaGAGTAGGAGCAACAACGCT +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTNGSWS*SRSNNA
Trigger: AGCGTTGTTGCTCCTACTCCAACTCCAGCTCCCGTT...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTTGCACCTACATCAGGTaGAAGAATACCAGCTTCATC +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPCTYIR*KNTSFI
Trigger: GATGAAGCTGGTATTCTTCCACCTGATGTAGGTGCA...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGGGGATAAAGAATGCTaGGAGAGAATGTCACAAAGA +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPGDKEC*ERMSQR
Trigger: TCTTTGTGACATTCTCTCTCAGCATTCTTTATCCCC...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATCTGAGACTCACACACTaGATTTCCTTTTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDLRLTH*ISFSSF
Trigger: GAAAGAAGAAAAGGAAATTCAGTGTGTGAGTCTCAG...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp ACCGTGCTCGCACGATTCAAGGTTTTGAGTTTCAGTAACTCATTCCTGATTCAGCTGAGACTCACACACTaGATTTCCTTTTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: TVLARFKVLSFSNSFLIQLRLTH*ISFSSF
Trigger: GAAAGAAGAAAAGGAAATTCAGTGTGTGAGTCTCAG...CTGAATCAGGAATGAGTTACTGAAACTCAAAACCTTGAATCGTGCGAGCACGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR TCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGTTGGAGACTGTTGGGTaGTGGTTGGAGGCTGTACCA +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKRELETVG*WLEAVP
Trigger: TGGTACAGCCTCCAACCATCACCCAACAGTCTCCAA...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACTTGGAGACTGTTGGGTaGTGGTTGGAGGCTGTACCA +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDLETVG*WLEAVP
Trigger: TGGTACAGCCTCCAACCATCACCCAACAGTCTCCAA...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTTCCAGAGTCTGCTTCTaGAACATGAATGATCTGCAA +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPSRVCF*NMNDLQ
Trigger: TTGCAGATCATTCATGTTTCAGAAGCAGACTCTGGA...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACGATTTTGAGGGGCTGTaGTCCAGTATGGAGCCGCTT +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYDFEGL*SSMEPL
Trigger: AAGCGGCTCCATACTGGATCACAGCCCCTCAAAATC...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp ACATTAGTACAAACCTGTGACAGGCACCCATTTAGTTATTCTCTTCCTTTTTCTCAGGCCTGTTTGCAATaGCCTGGTAGAGTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: TLVQTCDRHPFSYSLPFSQACLQ*PGRVCL
Trigger: CAAACACACTCTACCAGGTCATTGCAAACAGGCCTG...AGAAAAAGGAAGAGAATAACTAAATGGGTGCCTGTCACAGGTTTGTACTAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR TCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACATCAGCCACAGGACAGTaGGGGATAAGGTGTGATCAT +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITSATGQ*GIRCDH
Trigger: ATGATCACACCTTATCCCTCACTGTCCTGTGGCTGA...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp ACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGTTTTCAGCCACAGGACAGTaGGGGATAAGGTGTGATCAT +
Preference number: 4 (lower is better)
Translates to: TCIKLTFHRARTIQGFEFSATGQ*GIRCDH
Trigger: ATGATCACACCTTATCCCTCACTGTCCTGTGGCTGA...AAACTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR TCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCTCAGCTACCACTAGATaGTCCTTGTCAACAGTGAAC +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTSATTR*SLSTVN
Trigger: GTTCACTGTTGACAAGGATCATCTAGTGGTAGCTGA...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTAAAGGTTGGCGTGCCTaGGACAATATATTTGGATAC +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPKGWRA*DNIFGY
Trigger: GTATCCAAATATATTGTCTCAGGCACGCCAACCTTT...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCATGTCATTCAGGGCCTaGACTTTGATCAGGTATGGA +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTMSFRA*TLIRYG
Trigger: TCCATACCTGATCAAAGTTCAGGCCCTGAATGACAT...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACACACACATCAGACCAATaGACCAGCCCTGAGTTGCAA +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTHTSDQ*TSPELQ
Trigger: TTGCAACTCAGGGCTGGTTCATTGGTCTGATGTGTG...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGAGGAATTCATGGCGTTaGCAGGAGAAGGTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKRERNSWR*QEKVPL
Trigger: CAGAGGCACCTTCTCCTGTCAACGCCATGAATTCCT...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAGGAATTCATGGCGTTaGCAGGAGAAGGTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYRNSWR*QEKVPL
Trigger: CAGAGGCACCTTCTCCTGTCAACGCCATGAATTCCT...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATTTTCATGCATCATATTaGACTGTATCCTGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDFHASY*TVSCRG
Trigger: TCCTCTGCAGGATACAGTTCAATATGATGCATGAAA...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCAATCTTTGTGCTCTCTaGTGCCAAGGCAAACCTGTT +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTNLCAL*CQGKPV
Trigger: AACAGGTTTGCCTTGGCATCAGAGAGCACAAAGATT...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCTCCGCGTTCGTTCCTTaGTGTACACTGATAGACTCC +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTSAFVP*CTLIDS
Trigger: GGAGTCTATCAGTGTACAGCAAGGAACGAACGCGGA...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACATCCGCGTTCGTTCCTTaGTGTACACTGATAGACTCC +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTSAFVP*CTLIDS
Trigger: GGAGTCTATCAGTGTACAGCAAGGAACGAACGCGGA...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp ACCATCCTCTCAAAACACATAATGACTTTGCCTTTAGATGGACTCAAACCTAATTCCGCGTTCGTTCCTTaGTGTACACTGATAGACTCC +
Preference number: 4 (lower is better)
Translates to: TILSKHIMTLPLDGLKPNSAFVP*CTLIDS
Trigger: GGAGTCTATCAGTGTACAGCAAGGAACGAACGCGGA...ATTAGGTTTGAGTCCATCTAAAGGCAAAGTCATTATGTGTTTTGAGAGGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR GCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACACTGGTAGAGTGTGTTTaGAGGTGTGAGGATTCGTGG +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITLVECV*RCEDSW
Trigger: CCACGAATCCTCACACCTGCAAACACACTCTACCAG...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp ACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGTTTCTGGTAGAGTGTGTTTaGAGGTGTGAGGATTCGTGG +
Preference number: 4 (lower is better)
Translates to: TCIKLTFHRARTIQGFEFLVECV*RCEDSW
Trigger: CCACGAATCCTCACACCTGCAAACACACTCTACCAG...AAACTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR GCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCACCATGCTCCCTCTTTaGACAACTGCATATTCGGGC +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTTMLPL*TTAYSG
Trigger: GCCCGAATATGCAGTTGTGCAAAGAGGGAGCATGGT...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCATGCTCCCTCTTTaGACAACTGCATATTCGGGC +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTTMLPL*TTAYSG
Trigger: GCCCGAATATGCAGTTGTGCAAAGAGGGAGCATGGT...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGGCAAGCTCTTCCCAATaGTGTTCACTGCCATCACGC +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKREASSSQ*CSLPSR
Trigger: GCGTGATGGCAGTGAACAGCATTGGGAAGAGCTTGC...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACGCAAGCTCTTCCCAATaGTGTTCACTGCCATCACGC +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYASSSQ*CSLPSR
Trigger: GCGTGATGGCAGTGAACAGCATTGGGAAGAGCTTGC...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGAACAAAGGTTGGCGTaGCTGAGACAATATATTTGG +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPEQRLA*LRQYIW
Trigger: CCAAATATATTGTCTCAGGCACGCCAACCTTTGTTC...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCGTAGGTGTCCTCGGATaGTTTTCAGAGGTACTGGGT +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTVGVLG*FSEVLG
Trigger: ACCCAGTACCTCTGAAAAGCATCCGAGGACACCTAC...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCTGTACTCTGTCAAAATaGCATTCGGGTGGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTCTLSK*HSGGSV
Trigger: CACCGAGCCACCCGAATGGCATTTTGACAGAGTACA...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACATGTACTCTGTCAAAATaGCATTCGGGTGGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTCTLSK*HSGGSV
Trigger: CACCGAGCCACCCGAATGGCATTTTGACAGAGTACA...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTAGGCTTGTGGTCTTCTaGATCACTGTATTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPRLVVF*ITVFSK
Trigger: TTTGGAGAATACAGTGATGCAGAAGACCACAAGCCT...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATGCACAAATGCCGAAATaGACTGCAATACACATTGTT +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDAQMPK*TAIHIV
Trigger: AACAATGTGTATTGCAGTGCATTTCGGCATTTGTGC...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTTCAGTATGGCACAAATaGCGAAATGCACTGCAATAC +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPSVWHK*RNALQY
Trigger: GTATTGCAGTGCATTTCGGCATTTGTGCCATACTGA...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACATTACTAGGCCTACTGTaGCCCATAGGCAAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITLLGLL*PIGKAL
Trigger: CAGAGCTTTGCCTATGGGGCACAGTAGGCCTAGTAA...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACATTACTAGGCCTACTGTaGCCCATAGGCAAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTLLGLL*PIGKAL
Trigger: CAGAGCTTTGCCTATGGGGCACAGTAGGCCTAGTAA...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACTGCTTGAACTTTGCCTaGACCTACATCAGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHCLNFA*TYIRWK
Trigger: CTTCCACCTGATGTAGGTGCAGGCAAAGTTCAAGCA...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379028.8
CDS-3UTR GCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATTTCTCCATTCTTCTTTaGTGCCTGCTACACCATATT +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDFSILL*CLLHHI
Trigger: AATATGGTGTAGCAGGCAGCAAAGAAGAATGGAGAA...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379028.8
CDS-3UTR GCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGGTTGCAATATCCACCTaGCGGCTTGCCATCGCTTTG +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKREVAIST*RLAIAL
Trigger: CAAAGCGATGGCAAGCCGGCAGGTGGATATTGCAAC...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413765.6
CDS-3UTR CCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACACTTCAGAAGGTCCACTaGGCTAGACACCTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITLQKVH*ARHLPN
Trigger: ATTTGGGAGGTGTCTAGCCCAGTGGACCTTCTGAAG...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGTTTCTTCAGAAGGTCCACTaGGCTAGACACCTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: TCIKLTFHRARTIQGFEFLQKVH*ARHLPN
Trigger: ATTTGGGAGGTGTCTAGCCCAGTGGACCTTCTGAAG...AAACTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp ACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGTTTCTGTTGGGTGATGGTTaGAGGCTGTACCAGATCAAG +
Preference number: 4 (lower is better)
Translates to: TCIKLTFHRARTIQGFEFLLGDG*RLYQIK
Trigger: CTTGATCTGGTACAGCCTCCAACCATCACCCAACAG...AAACTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTCCTTTGGCTTCACACTaGATTACAATATTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPPLASH*ITIFSR
Trigger: TCGGGAGAATATTGTAATCCAGTGTGAAGCCAAAGG...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCGGGGCGGTTTCCCTTTaGCTTCACACTGGATTACAA +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTGAVSL*LHTGLQ
Trigger: TTGTAATCCAGTGTGAAGCCAAAGGGAAACCGCCCC...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACTCCACAATGGTGATCTaGATGGGCGGACAACAATGT +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHSTMVI*MGGQQC
Trigger: ACATTGTTGTCCGCCCATCCAGATCACCATTGTGGA...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TCAACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGTCCACAATGGTGATCTaGATGGGCGGACAACAATGT +
Preference number: 4 (lower is better)
Translates to: STCIKLTFHRARTIQGFESTMVI*MGGQQC
Trigger: ACATTGTTGTCCGCCCATCCAGATCACCATTGTGGA...CTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATGTTCAAGTTTTTCTTTaGTCCACAATGGTGATCTGG +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDVQVFL*STMVIW
Trigger: CCAGATCACCATTGTGGACCAAAGAAAAACTTGAAC...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATAAACTGTCCTGTTTTTaGGTAGCATTCCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDKLSCF*VAFHLP
Trigger: AGGAAGATGGAATGCTACCCAAAAACAGGACAGTTT...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACCGTGCTCGCACGATTCAAGGTTTTGAGTTTCAGTAACTCATTCCTGATTCAGAAACTGTCCTGTTTTTaGGTAGCATTCCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: TVLARFKVLSFSNSFLIQKLSCF*VAFHLP
Trigger: AGGAAGATGGAATGCTACCCAAAAACAGGACAGTTT...CTGAATCAGGAATGAGTTACTGAAACTCAAAACCTTGAATCGTGCGAGCACGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACATGTGAGGATTCGTGGTaGCTCAGCCAGCACATTTAC +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITCEDSW*LSQHIY
Trigger: GTAAATGTGCTGGCTGAGCCACCACGAATCCTCACA...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACCATCCTCTCAAAACACATAATGACTTTGCCTTTAGATGGACTCAAACCTAATTGTGAGGATTCGTGGTaGCTCAGCCAGCACATTTAC +
Preference number: 4 (lower is better)
Translates to: TILSKHIMTLPLDGLKPNCEDSW*LSQHIY
Trigger: GTAAATGTGCTGGCTGAGCCACCACGAATCCTCACA...ATTAGGTTTGAGTCCATCTAAAGGCAAAGTCATTATGTGTTTTGAGAGGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACAGGTGTGAGGATTCGTaGTGGCTCAGCCAGCACATT +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDRCEDS*WLSQHI
Trigger: AATGTGCTGGCTGAGCCACCACGAATCCTCACACCT...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACAAACCACTCGATGGTTaGGAGAGGAGACCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHKPLDG*ERRPKE
Trigger: TTCTTTGGGTCTCCTCTCCCAACCATCGAGTGGTTT...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCGTCAAAGGGAGGATTTaGGACATCAACAACGCTAAG +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTVKGRI*DINNAK
Trigger: CTTAGCGTTGTTGATGTCCCAAATCCTCCCTTTGAC...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000351718.8
CDS-3UTR CCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACGAAACTTCAGTTTGGTaGTGCCACAGCCCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYETSVW*CHSPGL
Trigger: CAAGCCAGGGCTGTGGCACCACCAAACTGAAGTTTC...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGGAAACTTCAGTTTGGTaGTGCCACAGCCCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKREETSVW*CHSPGL
Trigger: CAAGCCAGGGCTGTGGCACCACCAAACTGAAGTTTC...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAGCTTCAGCTGGGCTGTaGTCTGTGTTCCAGAAACTT +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTASAGL*SVFQKL
Trigger: AAGTTTCTGGAACACAGACCACAGCCCAGCTGAAGC...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACCATCCTCTCAAAACACATAATGACTTTGCCTTTAGATGGACTCAAACCTAATGCTTCAGCTGGGCTGTaGTCTGTGTTCCAGAAACTT +
Preference number: 4 (lower is better)
Translates to: TILSKHIMTLPLDGLKPNASAGL*SVFQKL
Trigger: AAGTTTCTGGAACACAGACCACAGCCCAGCTGAAGC...ATTAGGTTTGAGTCCATCTAAAGGCAAAGTCATTATGTGTTTTGAGAGGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCTTTGTACTGAAGGCCTaGCCCATTAGATTCGAAACC +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTFVLKA*PIRFET
Trigger: GGTTTCGAATCTAATGGGCCAGGCCTTCAGTACAAA...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACATTCGGGTGGCTCGGTaGATCCCATTCCAAAGTGAG +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYIRVAR*IPFQSE
Trigger: CTCACTTTGGAATGGGATCCACCGAGCCACCCGAAT...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATATTTCAGGGTCAGCATaGGCATCTTCCTTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDISGSA*ASSFSL
Trigger: TAAAGAAAAGGAAGATGCCCATGCTGACCCTGAAAT...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACTCTTCCTTCATAGGCTaGATTTCAGGGTCAGCATGG +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHSSFIG*ISGSAW
Trigger: CCATGCTGACCCTGAAATCCAGCCTATGAAGGAAGA...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACAATCCCTTGGACCGTTaGCCTTTTAAGCACTTGCCT +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHNPLDR*PFKHLP
Trigger: AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATT...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACGCAGATGTAATCCCTTaGACCGTTGGCCTTTTAAGC +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHADVIP*TVGLLS
Trigger: GCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGC...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCCTGTTGGGTGATGGTTaGAGGCTGTACCAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTLLGDG*RLYQVF
Trigger: GAAGACTTGGTACAGCCTCCAACCATCACCCAACAG...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAATCGTAAACGGGAGCTaGAGTTGGAGTAGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITIVNGS*SWSRSN
Trigger: GTTGCTCCTACTCCAACTCCAGCTCCCGTTTACGAT...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCGGGGATAAAGAATGCTaGGAGAGAATGTCACAAAGA +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTGDKEC*ERMSQR
Trigger: TCTTTGTGACATTCTCTCTCAGCATTCTTTATCCCC...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTCTGAGACTCACACACTaGATTTCCTTTTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPLRLTH*ISFSSF
Trigger: GAAAGAAGAAAAGGAAATTCAGTGTGTGAGTCTCAG...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATGACCACTTTGAAGTGTaGTTGGTTCAAGTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDDHFEV*LVQVFL
Trigger: AAGAAAAACTTGAACCAATCACACTTCAAAGTGGTC...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCTCCCCATTCAAACCTTaGGAAACTCTCTCACTTTGT +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTSPFKP*ETLSLC
Trigger: ACAAAGTGAGAGAGTTTCTCAAGGTTTGAATGGGGA...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCTGGCCTCTCTCTACTTaGTTTAGCACCATAAAACTC +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTWPLST*FSTIKL
Trigger: GAGTTTTATGGTGCTAAATCAAGTAGAGAGAGGCCA...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATCTTCTGAAACATGAATaGTCTGCAAGGTTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDLLKHE*SARFSQ
Trigger: TTGAGAAAACCTTGCAGATCATTCATGTTTCAGAAG...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACCAGGCCTGTTTGCAATaGCCTGGTAGAGTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDQACLQ*PGRVCL
Trigger: CAAACACACTCTACCAGGTCATTGCAAACAGGCCTG...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACCAGGCCTGTTTGCAATaGCCTGGTAGAGTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYQACLQ*PGRVCL
Trigger: CAAACACACTCTACCAGGTCATTGCAAACAGGCCTG...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATTCTTTGATTTCTAAGTaGACTTCATTCTTCGCCATC +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDSLISK*TSFFAI
Trigger: GATGGCGAAGAATGAAGTTCACTTAGAAATCAAAGA...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACTCAGCCACAGGACAGTaGGGGATAAGGTGTGATCAT +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYSATGQ*GIRCDH
Trigger: ATGATCACACCTTATCCCTCACTGTCCTGTGGCTGA...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAGATCCTTGTCAACAGTaGACCTTTCATCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTDPCQQ*TFHHWA
Trigger: TGCCCAGTGATGAAAGGTTCACTGTTGACAAGGATC...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCGATCCTTGTCAACAGTaGACCTTTCATCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTDPCQQ*TFHHWA
Trigger: TGCCCAGTGATGAAAGGTTCACTGTTGACAAGGATC...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp ACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGTTTGATCCTTGTCAACAGTaGACCTTTCATCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: TCIKLTFHRARTIQGFEFDPCQQ*TFHHWA
Trigger: TGCCCAGTGATGAAAGGTTCACTGTTGACAAGGATC...AAACTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR TCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACCGCTGTCATCGTCACTaGCATCAGCTACCACTAGAT +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDRCHRH*HQLPLD
Trigger: ATCTAGTGGTAGCTGATGTCAGTGACGATGACAGCG...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACCAAATTATCAGGCTCTaGTCCCAGTCCTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYQIIRL*SQSFHS
Trigger: GCTGTGGAAGGACTGGGATCAGAGCCTGATAATTTG...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACCAAATTATCAGGCTCTaGTCCCAGTCCTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDQIIRL*SQSFHS
Trigger: GCTGTGGAAGGACTGGGATCAGAGCCTGATAATTTG...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACACAGCTAACTTTGTACTaGAGGCCTGGCCCATTAGAT +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITQLTLY*RPGPLD
Trigger: ATCTAATGGGCCAGGCCTTCAGTACAAAGTTAGCTG...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACACAGCTAACTTTGTACTaGAGGCCTGGCCCATTAGAT +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTQLTLY*RPGPLD
Trigger: ATCTAATGGGCCAGGCCTTCAGTACAAAGTTAGCTG...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCAAAGGTTGGCGTGCCTaGGACAATATATTTGGATAC +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTKGWRA*DNIFGY
Trigger: GTATCCAAATATATTGTCTCAGGCACGCCAACCTTT...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCTCAGGGCCTGAACTTTaGTCAGGTATGGAACAAAGG +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTSGPEL*SGMEQR
Trigger: CCTTTGTTCCATACCTGATCAAAGTTCAGGCCCTGA...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATTCTGTTTCTTTTAGATaGACTCTGGGTCTTCCAATA +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDSVSFR*TLGLPI
Trigger: TATTGGAAGACCCAGAGTTCATCTAAAAGAAACAGA...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCGATCCCATTCCAAAGTaGGAGAGTCCAGTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTDPIPK*ESPVLD
Trigger: ATCCAACACTGGACTCTCTCACTTTGGAATGGGATC...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACCACACATCAGACCAATaGACCAGCCCTGAGTTGCAA +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDHTSDQ*TSPELQ
Trigger: TTGCAACTCAGGGCTGGTTCATTGGTCTGATGTGTG...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTTTTCATGCATCATATTaGACTGTATCCTGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPFHASY*TVSCRG
Trigger: TCCTCTGCAGGATACAGTTCAATATGATGCATGAAA...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAATGGACTGGACCAGCTaGTACAGAATGCACGATGTT +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTMDWTS*YRMHDV
Trigger: AACATCGTGCATTCTGTATCAGCTGGTCCAGTCCAT...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATGGCATTATTTTAAGCTaGATTAGCTTAACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDGIILS*ISLTPA
Trigger: AGCAGGAGTTAAGCTAATGCAGCTTAAAATAATGCC...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACAAGAGGTACTTCCAGTaGACTAATCATCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHKRYFQ*TNHLAQ
Trigger: CTGTGCCAGATGATTAGTGCACTGGAAGTACCTCTT...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCAATGTTATTAGAAACTaGAGCTCCGCGTTCGTTCCT +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTNVIRN*SSAFVP
Trigger: AGGAACGAACGCGGAGCTGCAGTTTCTAATAACATT...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCGCAGTCCTTCTGCAATaGACTCCAGTGAAAGCACAT +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTAVLLQ*TPVKAH
Trigger: ATGTGCTTTCACTGGAGTGCATTGCAGAAGGACTGC...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp ACATTAGTACAAACCTGTGACAGGCACCCATTTAGTTATTCTCTTCCTTTTTCTGCAGTCCTTCTGCAATaGACTCCAGTGAAAGCACAT +
Preference number: 4 (lower is better)
Translates to: TLVQTCDRHPFSYSLPFSAVLLQ*TPVKAH
Trigger: ATGTGCTTTCACTGGAGTGCATTGCAGAAGGACTGC...AGAAAAAGGAAGAGAATAACTAAATGGGTGCCTGTCACAGGTTTGTACTAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR GCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGCTGGTAGAGTGTGTTTaGAGGTGTGAGGATTCGTGG +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKRELVECV*RCEDSW
Trigger: CCACGAATCCTCACACCTGCAAACACACTCTACCAG...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACATTCAAAGGACACCATaGTCCCTCTTTGCACAACTG +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHIQRTP*SLFAQL
Trigger: CAGTTGTGCAAAGAGGGAGCATGGTGTCCTTTGAAT...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACACACAGCCCTGGCTTGTaGATTGCATCTTCATATTCG +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITHSPGL*IASSYS
Trigger: CGAATATGAAGATGCAATGCACAAGCCAGGGCTGTG...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp ACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGTTTCACAGCCCTGGCTTGTaGATTGCATCTTCATATTCG +
Preference number: 4 (lower is better)
Translates to: TCIKLTFHRARTIQGFEFHSPGL*IASSYS
Trigger: CGAATATGAAGATGCAATGCACAAGCCAGGGCTGTG...AAACTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR GCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATATATTTGGATACATTTaGCACAACCACAGATGTCCA +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDIFGYI*HNHRCP
Trigger: TGGACATCTGTGGTTGTGGCAAATGTATCCAAATAT...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGGTAGGTGTCCTCGGATaGTTTTCAGAGGTACTGGGT +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKREVGVLG*FSEVLG
Trigger: ACCCAGTACCTCTGAAAAGCATCCGAGGACACCTAC...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACGTAGGTGTCCTCGGATaGTTTTCAGAGGTACTGGGT +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYVGVLG*FSEVLG
Trigger: ACCCAGTACCTCTGAAAAGCATCCGAGGACACCTAC...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATAATGCCGAAATGCACTaGAATACACATTGTTTATGC +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDNAEMH*NTHCLC
Trigger: GCATAAACAATGTGTATTGCAGTGCATTTCGGCATT...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCTCAGTATGGCACAAATaGCGAAATGCACTGCAATAC +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTSVWHK*RNALQY
Trigger: GTATTGCAGTGCATTTCGGCATTTGTGCCATACTGA...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAGATCCTGGGATTTACTaGTTGAACTTTGCCTGCACC +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITDPGIY*LNFACT
Trigger: GGTGCAGGCAAAGTTCAAGCAGTAAATCCCAGGATC...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379028.8
CDS-3UTR CCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACCTTCAGAAGGTCCACTaGGCTAGACACCTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDLQKVH*ARHLPN
Trigger: ATTTGGGAGGTGTCTAGCCCAGTGGACCTTCTGAAG...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACATCTTTTGGAGACTGTTaGGTGATGGTTGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTSFGDC*VMVGGC
Trigger: ACAGCCTCCAACCATCACCCAACAGTCTCCAAAAGA...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACATCTTTTGGAGACTGTTaGGTGATGGTTGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITSFGDC*VMVGGC
Trigger: ACAGCCTCCAACCATCACCCAACAGTCTCCAAAAGA...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCTCCACAATGGTGATCTaGATGGGCGGACAACAATGT +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTSTMVI*MGGQQC
Trigger: ACATTGTTGTCCGCCCATCCAGATCACCATTGTGGA...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCTTCGCGGGTGTCCTCTaGGAGGACATTGGAAAAATA +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTFAGVL*EDIGKI
Trigger: TATTTTTCCAATGTCCTCCCAGAGGACACCCGCGAA...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACATGCCCAGTAAATAATTaGGGTAGGCAGTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTCPVNN*GRQSFC
Trigger: GCAGAAGGACTGCCTACCCCAATTATTTACTGGGCA...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCTGCCCAGTAAATAATTaGGGTAGGCAGTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTCPVNN*GRQSFC
Trigger: GCAGAAGGACTGCCTACCCCAATTATTTACTGGGCA...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACATTAGTACAAACCTGTGACAGGCACCCATTTAGTTATTCTCTTCCTTTTTCTTGCCCAGTAAATAATTaGGGTAGGCAGTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: TLVQTCDRHPFSYSLPFSCPVNN*GRQSFC
Trigger: GCAGAAGGACTGCCTACCCCAATTATTTACTGGGCA...AGAAAAAGGAAGAGAATAACTAAATGGGTGCCTGTCACAGGTTTGTACTAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTAAACTGTCCTGTTTTTaGGTAGCATTCCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPKLSCF*VAFHLP
Trigger: AGGAAGATGGAATGCTACCCAAAAACAGGACAGTTT...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAGGCTGTGATCCAGTATaGAGCCGCTTTAACTCTAAC +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITGCDPV*SRFNSN
Trigger: GTTAGAGTTAAAGCGGCTCCATACTGGATCACAGCC...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAGGCTGTGATCCAGTATaGAGCCGCTTTAACTCTAAC +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTGCDPV*SRFNSN
Trigger: GTTAGAGTTAAAGCGGCTCCATACTGGATCACAGCC...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACATTAGTACAAACCTGTGACAGGCACCCATTTAGTTATTCTCTTCCTTTTTCTGGCTGTGATCCAGTATaGAGCCGCTTTAACTCTAAC +
Preference number: 4 (lower is better)
Translates to: TLVQTCDRHPFSYSLPFSGCDPV*SRFNSN
Trigger: GTTAGAGTTAAAGCGGCTCCATACTGGATCACAGCC...AGAAAAAGGAAGAGAATAACTAAATGGGTGCCTGTCACAGGTTTGTACTAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCCATCTATTTTTCTGCTaGGGTCATCAGGGGCAATTT +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTHLFFC*GHQGQF
Trigger: AAATTGCCCCTGATGACCCCAGCAGAAAAATAGATG...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACTGTGAGGATTCGTGGTaGCTCAGCCAGCACATTTAC +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDCEDSW*LSQHIY
Trigger: GTAAATGTGCTGGCTGAGCCACCACGAATCCTCACA...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGTTTAAACCACTCGATGGTTaGGAGAGGAGACCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: TCIKLTFHRARTIQGFEFKPLDG*ERRPKE
Trigger: TTCTTTGGGTCTCCTCTCCCAACCATCGAGTGGTTT...AAACTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGGCTTCAGCTGGGCTGTaGTCTGTGTTCCAGAAACTT +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKREASAGL*SVFQKL
Trigger: AAGTTTCTGGAACACAGACCACAGCCCAGCTGAAGC...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACGCTTCAGCTGGGCTGTaGTCTGTGTTCCAGAAACTT +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYASAGL*SVFQKL
Trigger: AAGTTTCTGGAACACAGACCACAGCCCAGCTGAAGC...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACGCTTCAGCTGGGCTGTaGTCTGTGTTCCAGAAACTT +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDASAGL*SVFQKL
Trigger: AAGTTTCTGGAACACAGACCACAGCCCAGCTGAAGC...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACTTTGTACTGAAGGCCTaGCCCATTAGATTCGAAACC +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHFVLKA*PIRFET
Trigger: GGTTTCGAATCTAATGGGCCAGGCCTTCAGTACAAA...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACACTGGGGACTCCTTCTaGAGTATTAAAGACTCTGTC +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHTGDSF*SIKDSV
Trigger: GACAGAGTCTTTAATACTCCAGAAGGAGTCCCCAGT...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACATCTTCCTTCATAGGCTaGATTTCAGGGTCAGCATGG +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITSSFIG*ISGSAW
Trigger: CCATGCTGACCCTGAAATCCAGCCTATGAAGGAAGA...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCTCTTCCTTCATAGGCTaGATTTCAGGGTCAGCATGG +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTSSFIG*ISGSAW
Trigger: CCATGCTGACCCTGAAATCCAGCCTATGAAGGAAGA...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATTTTTTCAAAGGCTTGTaGTCTTCTGCATCACTGTAT +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDFFKGL*SSASLY
Trigger: ATACAGTGATGCAGAAGACCACAAGCCTTTGAAAAA...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACACCATCCTCATTGAACTaGCCATTAACCCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTPSSLN*PLTPSP
Trigger: TGGAGAAGGGGTTAATGGCCAGTTCAATGAGGATGG...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAAATCCCTTGGACCGTTaGCCTTTTAAGCACTTGCCT +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTNPLDR*PFKHLP
Trigger: AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATT...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAGCAGATGTAATCCCTTaGACCGTTGGCCTTTTAAGC +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTADVIP*TVGLLS
Trigger: GCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGC...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCGCAGATGTAATCCCTTaGACCGTTGGCCTTTTAAGC +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTADVIP*TVGLLS
Trigger: GCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGC...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACCTGTTGGGTGATGGTTaGAGGCTGTACCAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDLLGDG*RLYQVF
Trigger: GAAGACTTGGTACAGCCTCCAACCATCACCCAACAG...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGGTCAAAGGGAGGATTTaGGACATCGTAAACGGGAGC +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKREVKGRI*DIVNGS
Trigger: GCTCCCGTTTACGATGTCCCAAATCCTCCCTTTGAC...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACGTCAAAGGGAGGATTTaGGACATCGTAAACGGGAGC +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYVKGRI*DIVNGS
Trigger: GCTCCCGTTTACGATGTCCCAAATCCTCCCTTTGAC...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACCATCCTCTCAAAACACATAATGACTTTGCCTTTAGATGGACTCAAACCTAATACTTGTCTGAAGGCCTaGCCCATTAGATTCGAAACC +
Preference number: 4 (lower is better)
Translates to: TILSKHIMTLPLDGLKPNTCLKA*PIRFET
Trigger: GGTTTCGAATCTAATGGGCCAGGCCTTCAGACAAGT...ATTAGGTTTGAGTCCATCTAAAGGCAAAGTCATTATGTGTTTTGAGAGGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR TCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACATTATCGATGTCAAAATaGGTCCCATTACGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITLSMSK*VPLRVQ
Trigger: CTGGACCCGTAATGGGACTCATTTTGACATCGATAA...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCTTATCGATGTCAAAATaGGTCCCATTACGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTLSMSK*VPLRVQ
Trigger: CTGGACCCGTAATGGGACTCATTTTGACATCGATAA...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp ACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGTTTTTATCGATGTCAAAATaGGTCCCATTACGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: TCIKLTFHRARTIQGFEFLSMSK*VPLRVQ
Trigger: CTGGACCCGTAATGGGACTCATTTTGACATCGATAA...AAACTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR TCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACTCCCCATTCAAACCTTaGGAAACTCTCTCACTTTGT +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHSPFKP*ETLSLC
Trigger: ACAAAGTGAGAGAGTTTCTCAAGGTTTGAATGGGGA...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACTGGCCTCTCTCTACTTaGTTTAGCACCATAAAACTC +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHWPLST*FSTIKL
Trigger: GAGTTTTATGGTGCTAAATCAAGTAGAGAGAGGCCA...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACTCCAGAGTCTGCTTCTaGAACATGAATGATCTGCAA +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHSRVCF*NMNDLQ
Trigger: TTGCAGATCATTCATGTTTCAGAAGCAGACTCTGGA...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTTCTTTGATTTCTAAGTaGACTTCATTCTTCGCCATC +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPSLISK*TSFFAI
Trigger: GATGGCGAAGAATGAAGTTCACTTAGAAATCAAAGA...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACATCAGCTACCACTAGATaGTCCTTGTCAACAGTGAAC +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTSATTR*SLSTVN
Trigger: GTTCACTGTTGACAAGGATCATCTAGTGGTAGCTGA...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACATCAGCTACCACTAGATaGTCCTTGTCAACAGTGAAC +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITSATTR*SLSTVN
Trigger: GTTCACTGTTGACAAGGATCATCTAGTGGTAGCTGA...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTACACTTTTGTCAAGTTaGTCTGTCAGTTCTAAGTCA +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPTLLSS*SVSSKS
Trigger: TGACTTAGAACTGACAGATCAACTTGACAAAAGTGT...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACCAGCTAACTTTGTACTaGAGGCCTGGCCCATTAGAT +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDQLTLY*RPGPLD
Trigger: ATCTAATGGGCCAGGCCTTCAGTACAAAGTTAGCTG...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACAAAGGTTGGCGTGCCTaGGACAATATATTTGGATAC +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHKGWRA*DNIFGY
Trigger: GTATCCAAATATATTGTCTCAGGCACGCCAACCTTT...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACTCAGGGCCTGAACTTTaGTCAGGTATGGAACAAAGG +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYSGPEL*SGMEQR
Trigger: CCTTTGTTCCATACCTGATCAAAGTTCAGGCCCTGA...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAATGTCATTCAGGGCCTaGACTTTGATCAGGTATGGA +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTMSFRA*TLIRYG
Trigger: TCCATACCTGATCAAAGTTCAGGCCCTGAATGACAT...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTTCTGTTTCTTTTAGATaGACTCTGGGTCTTCCAATA +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPSVSFR*TLGLPI
Trigger: TATTGGAAGACCCAGAGTTCATCTAAAAGAAACAGA...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACATGCTGCCTTGGAAGGTaGGGATCTTTTTCTCAATGT +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTCCLGR*GSFSQC
Trigger: ACATTGAGAAAAAGATCCTCACCTTCCAAGGCAGCA...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACATGCTGCCTTGGAAGGTaGGGATCTTTTTCTCAATGT +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITCCLGR*GSFSQC
Trigger: ACATTGAGAAAAAGATCCTCACCTTCCAAGGCAGCA...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCGCTTCCTCTGTAATTTaGCTTCCTGATCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTASSVI*LPDPAD
Trigger: ATCAGCAGGATCAGGAAGTCAAATTACAGAGGAAGC...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCGGAATGCTTAATATCTaGAGGCACTGTATGTGTCTT +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTGMLNI*RHCMCL
Trigger: AAGACACATACAGTGCCTTCAGATATTAAGCATTCC...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACATGGACTGGACCAGCTaGTACAGAATGCACGATGTT +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDMDWTS*YRMHDV
Trigger: AACATCGTGCATTCTGTATCAGCTGGTCCAGTCCAT...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGATGGACTGGACCAGCTaGTACAGAATGCACGATGTT +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKREMDWTS*YRMHDV
Trigger: AACATCGTGCATTCTGTATCAGCTGGTCCAGTCCAT...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCCTCAAACACATCCTCTaGACTCACAAAACCAGAGTC +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTLKHIL*THKTRV
Trigger: GACTCTGGTTTTGTGAGTTCAGAGGATGTGTTTGAG...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379028.8
CDS-3UTR GCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAAAGAGGTACTTCCAGTaGACTAATCATCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITKRYFQ*TNHLAQ
Trigger: CTGTGCCAGATGATTAGTGCACTGGAAGTACCTCTT...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp ACCATCCTCTCAAAACACATAATGACTTTGCCTTTAGATGGACTCAAACCTAATAAGAGGTACTTCCAGTaGACTAATCATCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: TILSKHIMTLPLDGLKPNKRYFQ*TNHLAQ
Trigger: CTGTGCCAGATGATTAGTGCACTGGAAGTACCTCTT...ATTAGGTTTGAGTCCATCTAAAGGCAAAGTCATTATGTGTTTTGAGAGGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR GCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAATCCAATTGGGGGTCTaGAGGGAAGTACTAAAGACT +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITIQLGV*REVLKT
Trigger: AGTCTTTAGTACTTCCCTGCAGACCCCCAATTGGAT...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCATCCAATTGGGGGTCTaGAGGGAAGTACTAAAGACT +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTIQLGV*REVLKT
Trigger: AGTCTTTAGTACTTCCCTGCAGACCCCCAATTGGAT...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATCTTTGTTACTTGCATTaGCTTCTGGAGTTAAAAATG +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDLCYLH*LLELKM
Trigger: CATTTTTAACTCCAGAAGGCAATGCAAGTAACAAAG...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACGCAGTCCTTCTGCAATaGACTCCAGTGAAAGCACAT +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYAVLLQ*TPVKAH
Trigger: ATGTGCTTTCACTGGAGTGCATTGCAGAAGGACTGC...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCCCCTCTTTGCACAACTaGATATTCGGGCTGTTTAAC +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTPSLHN*IFGLFN
Trigger: GTTAAACAGCCCGAATATGCAGTTGTGCAAAGAGGG...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCATTCAAAGGACACCATaGTCCCTCTTTGCACAACTG +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTIQRTP*SLFAQL
Trigger: CAGTTGTGCAAAGAGGGAGCATGGTGTCCTTTGAAT...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACCACAGCCCTGGCTTGTaGATTGCATCTTCATATTCG +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDHSPGL*IASSYS
Trigger: CGAATATGAAGATGCAATGCACAAGCCAGGGCTGTG...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTATCCACAGTTGTTACTaGTTCCTCTGTAATTTGACT +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPIHSCY*FLCNLT
Trigger: AGTCAAATTACAGAGGAAGCAGTAACAACTGTGGAT...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACACCAGCTGATACAGAATaGACGATGTTGTGGAATGCT +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTPADTE*TMLWNA
Trigger: AGCATTCCACAACATCGTGCATTCTGTATCAGCTGG...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCTTCTTTTCCCAGCATTaGAGTTTTCATGAACTCTGC +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTFFSQH*SFHELC
Trigger: GCAGAGTTCATGAAAACTGCAATGCTGGGAAAAGAA...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATATATTACTGTTGGCATaGTGTTGTATGCTTTTAGTG +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDILLLA*CCMLLV
Trigger: CACTAAAAGCATACAACAGCATGCCAACAGTAATAT...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACATTACTGCTTGAACTTTaGCTGCACCTACATCAGGTG +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITLLLEL*LHLHQV
Trigger: CACCTGATGTAGGTGCAGGCAAAGTTCAAGCAGTAA...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379028.8
CDS-3UTR CCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAAGTGCACTAATCATCTaGCACAGGAAGAGAATCAGG +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTSALII*HRKRIR
Trigger: CCTGATTCTCTTCCTGTGCCAGATGATTAGTGCACT...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAAGTGCACTAATCATCTaGCACAGGAAGAGAATCAGG +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITSALII*HRKRIR
Trigger: CCTGATTCTCTTCCTGTGCCAGATGATTAGTGCACT...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACATTAGTACAAACCTGTGACAGGCACCCATTTAGTTATTCTCTTCCTTTTTCTAGTGCACTAATCATCTaGCACAGGAAGAGAATCAGG +
Preference number: 4 (lower is better)
Translates to: TLVQTCDRHPFSYSLPFSSALII*HRKRIR
Trigger: CCTGATTCTCTTCCTGTGCCAGATGATTAGTGCACT...AGAAAAAGGAAGAGAATAACTAAATGGGTGCCTGTCACAGGTTTGTACTAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACTCTTTTGGAGACTGTTaGGTGATGGTTGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYSFGDC*VMVGGC
Trigger: ACAGCCTCCAACCATCACCCAACAGTCTCCAAAAGA...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACCGTGCTCGCACGATTCAAGGTTTTGAGTTTCAGTAACTCATTCCTGATTCAGAATAATGTAATCTTTTaGAGACTGTTGGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: TVLARFKVLSFSNSFLIQNNVIF*RLLGDG
Trigger: ACCATCACCCAACAGTCTCCAAAAGATTACATTATT...CTGAATCAGGAATGAGTTACTGAAACTCAAAACCTTGAATCGTGCGAGCACGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGTCCACAATGGTGATCTaGATGGGCGGACAACAATGT +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKRESTMVI*MGGQQC
Trigger: ACATTGTTGTCCGCCCATCCAGATCACCATTGTGGA...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACTCCACAATGGTGATCTaGATGGGCGGACAACAATGT +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDSTMVI*MGGQQC
Trigger: ACATTGTTGTCCGCCCATCCAGATCACCATTGTGGA...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACTTCGCGGGTGTCCTCTaGGAGGACATTGGAAAAATA +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDFAGVL*EDIGKI
Trigger: TATTTTTCCAATGTCCTCCCAGAGGACACCCGCGAA...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACTTCGCGGGTGTCCTCTaGGAGGACATTGGAAAAATA +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYFAGVL*EDIGKI
Trigger: TATTTTTCCAATGTCCTCCCAGAGGACACCCGCGAA...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACACTAACAGAAATGGTATaGTGGATGGCTCCTAATGCG +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTLTEMV*WMAPNA
Trigger: CGCATTAGGAGCCATCCACCATACCATTTCTGTTAG...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCCTAACAGAAATGGTATaGTGGATGGCTCCTAATGCG +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTLTEMV*WMAPNA
Trigger: CGCATTAGGAGCCATCCACCATACCATTTCTGTTAG...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGTTTCTAACAGAAATGGTATaGTGGATGGCTCCTAATGCG +
Preference number: 4 (lower is better)
Translates to: TCIKLTFHRARTIQGFEFLTEMV*WMAPNA
Trigger: CGCATTAGGAGCCATCCACCATACCATTTCTGTTAG...AAACTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACGGCTGTGATCCAGTATaGAGCCGCTTTAACTCTAAC +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDGCDPV*SRFNSN
Trigger: GTTAGAGTTAAAGCGGCTCCATACTGGATCACAGCC...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACAAACCACTCGATGGTTaGGAGAGGAGACCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDKPLDG*ERRPKE
Trigger: TTCTTTGGGTCTCCTCTCCCAACCATCGAGTGGTTT...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCCCTGTACTGTCCTTTTaGGCCACAGGAATTTCCAAA +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTPVLSF*ATGISK
Trigger: TTTGGAAATTCCTGTGGCCCAAAAGGACAGTACAGG...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACCATCCTCTCAAAACACATAATGACTTTGCCTTTAGATGGACTCAAACCTAATGTCAAAGGGAGGATTTaGGACATCAACAACGCTAAG +
Preference number: 4 (lower is better)
Translates to: TILSKHIMTLPLDGLKPNVKGRI*DINNAK
Trigger: CTTAGCGTTGTTGATGTCCCAAATCCTCCCTTTGAC...ATTAGGTTTGAGTCCATCTAAAGGCAAAGTCATTATGTGTTTTGAGAGGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACGTCCTTCCACAGCTGTaGGGTTTTTATCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYVLPQL*GFYLVL
Trigger: CAGAACCAGATAAAAACCCCACAGCTGTGGAAGGAC...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATCTGAGACAATATATTTaGATACATTTGCCACAACCA +
Preference number: 4 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDLRQYI*IHLPQP
Trigger: TGGTTGTGGCAAATGTATCCAAATATATTGTCTCAG...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGCCATCCTCATTGAACTaGCCATTAACCCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKREPSSLN*PLTPSP
Trigger: TGGAGAAGGGGTTAATGGCCAGTTCAATGAGGATGG...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCTGCTGCTGTAATGCCTaGAAGATTAAGAAGCCTACG +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTCCCNA*KIKKPT
Trigger: CGTAGGCTTCTTAATCTTCCAGGCATTACAGCAGCA...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAATCCCTTGGACCGTTaGCCTTTTAAGCACTTGCCT +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYNPLDR*PFKHLP
Trigger: AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATT...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCGTCTTCAAGAAGTTTTaGATCAAGAGGTACTTCCAG +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTVFKKF*IKRYFQ
Trigger: CTGGAAGTACCTCTTGATCCAAAACTTCTTGAAGAC...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCTGCACCTACATCAGGTaGAAGAATACCAGCTTCATC +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTCTYIR*KNTSFI
Trigger: GATGAAGCTGGTATTCTTCCACCTGATGTAGGTGCA...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACATGCACCTACATCAGGTaGAAGAATACCAGCTTCATC +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITCTYIR*KNTSFI
Trigger: GATGAAGCTGGTATTCTTCCACCTGATGTAGGTGCA...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCGGGGATAAAGAATGCTaGGAGAGAATGTCACAAAGA +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTGDKEC*ERMSQR
Trigger: TCTTTGTGACATTCTCTCTCAGCATTCTTTATCCCC...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp ACCATCCTCTCAAAACACATAATGACTTTGCCTTTAGATGGACTCAAACCTAATGGGGATAAAGAATGCTaGGAGAGAATGTCACAAAGA +
Preference number: 4 (lower is better)
Translates to: TILSKHIMTLPLDGLKPNGDKEC*ERMSQR
Trigger: TCTTTGTGACATTCTCTCTCAGCATTCTTTATCCCC...ATTAGGTTTGAGTCCATCTAAAGGCAAAGTCATTATGTGTTTTGAGAGGATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR TCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACCTGAGACTCACACACTaGATTTCCTTTTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHLRLTH*ISFSSF
Trigger: GAAAGAAGAAAAGGAAATTCAGTGTGTGAGTCTCAG...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGTTATCGATGTCAAAATaGGTCCCATTACGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKRELSMSK*VPLRVQ
Trigger: CTGGACCCGTAATGGGACTCATTTTGACATCGATAA...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACATCCCCATTCAAACCTTaGGAAACTCTCTCACTTTGT +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTSPFKP*ETLSLC
Trigger: ACAAAGTGAGAGAGTTTCTCAAGGTTTGAATGGGGA...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp ACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGTTTTGGCCTCTCTCTACTTaGTTTAGCACCATAAAACTC +
Preference number: 4 (lower is better)
Translates to: TCIKLTFHRARTIQGFEFWPLST*FSTIKL
Trigger: GAGTTTTATGGTGCTAAATCAAGTAGAGAGAGGCCA...AAACTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR TCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCTCCAGAGTCTGCTTCTaGAACATGAATGATCTGCAA +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTSRVCF*NMNDLQ
Trigger: TTGCAGATCATTCATGTTTCAGAAGCAGACTCTGGA...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp ACCATCCTCTCAAAACACATAATGACTTTGCCTTTAGATGGACTCAAACCTAATTCCAGAGTCTGCTTCTaGAACATGAATGATCTGCAA +
Preference number: 4 (lower is better)
Translates to: TILSKHIMTLPLDGLKPNSRVCF*NMNDLQ
Trigger: TTGCAGATCATTCATGTTTCAGAAGCAGACTCTGGA...ATTAGGTTTGAGTCCATCTAAAGGCAAAGTCATTATGTGTTTTGAGAGGATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR TCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCGTGAGGGATAAGGTGTaGTCATGTTTCACTTTGCAT +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTVRDKV*SCFTLH
Trigger: ATGCAAAGTGAAACATGATCACACCTTATCCCTCAC...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp ACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGTTTGTGAGGGATAAGGTGTaGTCATGTTTCACTTTGCAT +
Preference number: 4 (lower is better)
Translates to: TCIKLTFHRARTIQGFEFVRDKV*SCFTLH
Trigger: ATGCAAAGTGAAACATGATCACACCTTATCCCTCAC...AAACTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR TCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCACACTTTTGTCAAGTTaGTCTGTCAGTTCTAAGTCA +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTTLLSS*SVSSKS
Trigger: TGACTTAGAACTGACAGATCAACTTGACAAAAGTGT...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACATGTCATTCAGGGCCTaGACTTTGATCAGGTATGGA +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYMSFRA*TLIRYG
Trigger: TCCATACCTGATCAAAGTTCAGGCCCTGAATGACAT...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACGCTTCCTCTGTAATTTaGCTTCCTGATCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYASSVI*LPDPAD
Trigger: ATCAGCAGGATCAGGAAGTCAAATTACAGAGGAAGC...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAGCACTATTACAGAAGTaGCCCTTTCATGCACAGATA +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTALLQK*PFHAQI
Trigger: TATCTGTGCATGAAAGGGTCACTTCTGTAATAGTGC...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCGCACTATTACAGAAGTaGCCCTTTCATGCACAGATA +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTALLQK*PFHAQI
Trigger: TATCTGTGCATGAAAGGGTCACTTCTGTAATAGTGC...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACCCTCATATTCCCAACTaGTATTGGCATAGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDPHIPN*YWHRSQ
Trigger: CTGAGACCTATGCCAATATCAGTTGGGAATATGAGG...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379028.8
CDS-3UTR GCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCAATGTTATTAGAAACTaGAGCTCCGCGTTCGTTCCT +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTNVIRN*SSAFVP
Trigger: AGGAACGAACGCGGAGCTGCAGTTTCTAATAACATT...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp ACATTAGTACAAACCTGTGACAGGCACCCATTTAGTTATTCTCTTCCTTTTTCTAATGTTATTAGAAACTaGAGCTCCGCGTTCGTTCCT +
Preference number: 4 (lower is better)
Translates to: TLVQTCDRHPFSYSLPFSNVIRN*SSAFVP
Trigger: AGGAACGAACGCGGAGCTGCAGTTTCTAATAACATT...AGAAAAAGGAAGAGAATAACTAAATGGGTGCCTGTCACAGGTTTGTACTAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR GCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGATCCAATTGGGGGTCTaGAGGGAAGTACTAAAGACT +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKREIQLGV*REVLKT
Trigger: AGTCTTTAGTACTTCCCTGCAGACCCCCAATTGGAT...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTCTTTGTTACTTGCATTaGCTTCTGGAGTTAAAAATG +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPLCYLH*LLELKM
Trigger: CATTTTTAACTCCAGAAGGCAATGCAAGTAACAAAG...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACCCCTCTTTGCACAACTaGATATTCGGGCTGTTTAAC +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDPSLHN*IFGLFN
Trigger: GTTAAACAGCCCGAATATGCAGTTGTGCAAAGAGGG...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGCCCTCTTTGCACAACTaGATATTCGGGCTGTTTAAC +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKREPSLHN*IFGLFN
Trigger: GTTAAACAGCCCGAATATGCAGTTGTGCAAAGAGGG...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCCCCTGGCTTGTGCATTaGATCTTCATATTCGATGAT +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTPWLVH*IFIFDD
Trigger: ATCATCGAATATGAAGATGCAATGCACAAGCCAGGG...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp ACATTAGTACAAACCTGTGACAGGCACCCATTTAGTTATTCTCTTCCTTTTTCTCCCTGGCTTGTGCATTaGATCTTCATATTCGATGAT +
Preference number: 4 (lower is better)
Translates to: TLVQTCDRHPFSYSLPFSPWLVH*IFIFDD
Trigger: ATCATCGAATATGAAGATGCAATGCACAAGCCAGGG...AGAAAAAGGAAGAGAATAACTAAATGGGTGCCTGTCACAGGTTTGTACTAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR GCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCATATTTGGATACATTTaGCACAACCACAGATGTCCA +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTIFGYI*HNHRCP
Trigger: TGGACATCTGTGGTTGTGGCAAATGTATCCAAATAT...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCGAACAAAGGTTGGCGTaGCTGAGACAATATATTTGG +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTEQRLA*LRQYIW
Trigger: CCAAATATATTGTCTCAGGCACGCCAACCTTTGTTC...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAGAACAAAGGTTGGCGTaGCTGAGACAATATATTTGG +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITEQRLA*LRQYIW
Trigger: CCAAATATATTGTCTCAGGCACGCCAACCTTTGTTC...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAAGGCTTGTGGTCTTCTaGATCACTGTATTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITRLVVF*ITVFSK
Trigger: TTTGGAGAATACAGTGATGCAGAAGACCACAAGCCT...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGTGGAGCATTTTTCATaGATCATATTGAACTGTATC +
Preference number: 4 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPVEHFS*IILNCI
Trigger: GATACAGTTCAATATGATGCATGAAAAATGCTCCAC...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAAAAAGTAGAACACTGTaGTGCTGTAATGCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTKSRTL*CCNAWK
Trigger: CTTCCAGGCATTACAGCAGCACAGTGTTCTACTTTT...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAAAAAGTAGAACACTGTaGTGCTGTAATGCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITKSRTL*CCNAWK
Trigger: CTTCCAGGCATTACAGCAGCACAGTGTTCTACTTTT...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACATCAGTATGGCACAAATaGCGAAATGCACTGCAATAC +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITSVWHK*RNALQY
Trigger: GTATTGCAGTGCATTTCGGCATTTGTGCCATACTGA...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACATCAGTATGGCACAAATaGCGAAATGCACTGCAATAC +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTSVWHK*RNALQY
Trigger: GTATTGCAGTGCATTTCGGCATTTGTGCCATACTGA...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACCCAGCTGATACAGAATaGACGATGTTGTGGAATGCT +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDPADTE*TMLWNA
Trigger: AGCATTCCACAACATCGTGCATTCTGTATCAGCTGG...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGCCAGCTGATACAGAATaGACGATGTTGTGGAATGCT +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKREPADTE*TMLWNA
Trigger: AGCATTCCACAACATCGTGCATTCTGTATCAGCTGG...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACATAGGTCTCAGCAGCTaGAGCAGTAAGATTGCTGAT +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDIGLSS*SSKIAD
Trigger: ATCAGCAATCTTACTGCTGCAGCTGCTGAGACCTAT...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379028.8
CDS-3UTR CCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACAGTGCACTAATCATCTaGCACAGGAAGAGAATCAGG +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDSALII*HRKRIR
Trigger: CCTGATTCTCTTCCTGTGCCAGATGATTAGTGCACT...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAGTGCACTAATCATCTaGCACAGGAAGAGAATCAGG +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYSALII*HRKRIR
Trigger: CCTGATTCTCTTCCTGTGCCAGATGATTAGTGCACT...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACACCTTTGGCTTCACACTaGATTACAATATTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITPLASH*ITIFSR
Trigger: TCGGGAGAATATTGTAATCCAGTGTGAAGCCAAAGG...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACACCTTTGGCTTCACACTaGATTACAATATTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTPLASH*ITIFSR
Trigger: TCGGGAGAATATTGTAATCCAGTGTGAAGCCAAAGG...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACATTAGTACAAACCTGTGACAGGCACCCATTTAGTTATTCTCTTCCTTTTTCTCCTTTGGCTTCACACTaGATTACAATATTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: TLVQTCDRHPFSYSLPFSPLASH*ITIFSR
Trigger: TCGGGAGAATATTGTAATCCAGTGTGAAGCCAAAGG...AGAAAAAGGAAGAGAATAACTAAATGGGTGCCTGTCACAGGTTTGTACTAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACCTAACAGAAATGGTATaGTGGATGGCTCCTAATGCG +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYLTEMV*WMAPNA
Trigger: CGCATTAGGAGCCATCCACCATACCATTTCTGTTAG...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACACATCTATTTTTCTGCTaGGGTCATCAGGGGCAATTT +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITHLFFC*GHQGQF
Trigger: AAATTGCCCCTGATGACCCCAGCAGAAAAATAGATG...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCCATCTATTTTTCTGCTaGGGTCATCAGGGGCAATTT +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTHLFFC*GHQGQF
Trigger: AAATTGCCCCTGATGACCCCAGCAGAAAAATAGATG...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGTTTCATCTATTTTTCTGCTaGGGTCATCAGGGGCAATTT +
Preference number: 4 (lower is better)
Translates to: TCIKLTFHRARTIQGFEFHLFFC*GHQGQF
Trigger: AAATTGCCCCTGATGACCCCAGCAGAAAAATAGATG...AAACTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACCCTGTACTGTCCTTTTaGGCCACAGGAATTTCCAAA +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYPVLSF*ATGISK
Trigger: TTTGGAAATTCCTGTGGCCCAAAAGGACAGTACAGG...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACTTTGTACTGAAGGCCTaGCCCATTAGATTCGAAACC +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYFVLKA*PIRFET
Trigger: GGTTTCGAATCTAATGGGCCAGGCCTTCAGTACAAA...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACAACTTTGATCAGGTATaGAACAAAGGTTGGCGTGCC +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDNFDQV*NKGWRA
Trigger: GGCACGCCAACCTTTGTTCCATACCTGATCAAAGTT...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGAACTTTGATCAGGTATaGAACAAAGGTTGGCGTGCC +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKRENFDQV*NKGWRA
Trigger: GGCACGCCAACCTTTGTTCCATACCTGATCAAAGTT...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACACTGGGGACTCCTTCTaGAGTATTAAAGACTCTGTC +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDTGDSF*SIKDSV
Trigger: GACAGAGTCTTTAATACTCCAGAAGGAGTCCCCAGT...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACATTTCAGGGTCAGCATaGGCATCTTCCTTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHISGSA*ASSFSL
Trigger: TAAAGAAAAGGAAGATGCCCATGCTGACCCTGAAAT...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCTTTTTCAAAGGCTTGTaGTCTTCTGCATCACTGTAT +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTFFKGL*SSASLY
Trigger: ATACAGTGATGCAGAAGACCACAAGCCTTTGAAAAA...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACTGCTGCTGTAATGCCTaGAAGATTAAGAAGCCTACG +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDCCCNA*KIKKPT
Trigger: CGTAGGCTTCTTAATCTTCCAGGCATTACAGCAGCA...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAAAAGTTCACATGCTCTaGTCCCTCATATTCCCAACT +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTKVHML*SLIFPT
Trigger: AGTTGGGAATATGAGGGACCAGAGCATGTGAACTTT...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379028.8
CDS-3UTR TCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACGGGGATAAAGAATGCTaGGAGAGAATGTCACAAAGA +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYGDKEC*ERMSQR
Trigger: TCTTTGTGACATTCTCTCTCAGCATTCTTTATCCCC...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACTCCCCATTCAAACCTTaGGAAACTCTCTCACTTTGT +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDSPFKP*ETLSLC
Trigger: ACAAAGTGAGAGAGTTTCTCAAGGTTTGAATGGGGA...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TCAACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGCTTCTGAAACATGAATaGTCTGCAAGGTTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: STCIKLTFHRARTIQGFELLKHE*SARFSQ
Trigger: TTGAGAAAACCTTGCAGATCATTCATGTTTCAGAAG...CTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR TCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACTCCAGAGTCTGCTTCTaGAACATGAATGATCTGCAA +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDSRVCF*NMNDLQ
Trigger: TTGCAGATCATTCATGTTTCAGAAGCAGACTCTGGA...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCGTTTTTATCTGGTTCTaGGGCTTTCGTCAAATACTG +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTVFIWF*GFRQIL
Trigger: CAGTATTTGACGAAAGCCTCAGAACCAGATAAAAAC...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp ACCATCCTCTCAAAACACATAATGACTTTGCCTTTAGATGGACTCAAACCTAATGTTTTTATCTGGTTCTaGGGCTTTCGTCAAATACTG +
Preference number: 4 (lower is better)
Translates to: TILSKHIMTLPLDGLKPNVFIWF*GFRQIL
Trigger: CAGTATTTGACGAAAGCCTCAGAACCAGATAAAAAC...ATTAGGTTTGAGTCCATCTAAAGGCAAAGTCATTATGTGTTTTGAGAGGATGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR TCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAGGTTGGCGTGCCTaGGACAATATATTTGGATAC +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYKGWRA*DNIFGY
Trigger: GTATCCAAATATATTGTCTCAGGCACGCCAACCTTT...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAGGAATGCTTAATATCTaGAGGCACTGTATGTGTCTT +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITGMLNI*RHCMCL
Trigger: AAGACACATACAGTGCCTTCAGATATTAAGCATTCC...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAGGAATGCTTAATATCTaGAGGCACTGTATGTGTCTT +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTGMLNI*RHCMCL
Trigger: AAGACACATACAGTGCCTTCAGATATTAAGCATTCC...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGGCACTATTACAGAAGTaGCCCTTTCATGCACAGATA +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKREALLQK*PFHAQI
Trigger: TATCTGTGCATGAAAGGGTCACTTCTGTAATAGTGC...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGAATGTTATTAGAAACTaGAGCTCCGCGTTCGTTCCT +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKRENVIRN*SSAFVP
Trigger: AGGAACGAACGCGGAGCTGCAGTTTCTAATAACATT...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAATGTTATTAGAAACTaGAGCTCCGCGTTCGTTCCT +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYNVIRN*SSAFVP
Trigger: AGGAACGAACGCGGAGCTGCAGTTTCTAATAACATT...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGCCCTGGCTTGTGCATTaGATCTTCATATTCGATGAT +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKREPWLVH*IFIFDD
Trigger: ATCATCGAATATGAAGATGCAATGCACAAGCCAGGG...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACCCCTGGCTTGTGCATTaGATCTTCATATTCGATGAT +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYPWLVH*IFIFDD
Trigger: ATCATCGAATATGAAGATGCAATGCACAAGCCAGGG...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACAGGCTTGTGGTCTTCTaGATCACTGTATTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDRLVVF*ITVFSK
Trigger: TTTGGAGAATACAGTGATGCAGAAGACCACAAGCCT...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAGGCTTGTGGTCTTCTaGATCACTGTATTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYRLVVF*ITVFSK
Trigger: TTTGGAGAATACAGTGATGCAGAAGACCACAAGCCT...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACAAAAGTAGAACACTGTaGTGCTGTAATGCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDKSRTL*CCNAWK
Trigger: CTTCCAGGCATTACAGCAGCACAGTGTTCTACTTTT...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCGCACAAATGCCGAAATaGACTGCAATACACATTGTT +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTAQMPK*TAIHIV
Trigger: AACAATGTGTATTGCAGTGCATTTCGGCATTTGTGC...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAGCACAAATGCCGAAATaGACTGCAATACACATTGTT +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITAQMPK*TAIHIV
Trigger: AACAATGTGTATTGCAGTGCATTTCGGCATTTGTGC...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACACACGATGTTGTGGAATaGTTAATATCTGAAGGCACT +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITHDVVE*LISEGT
Trigger: AGTGCCTTCAGATATTAAGCATTCCACAACATCGTG...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCCACGATGTTGTGGAATaGTTAATATCTGAAGGCACT +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTHDVVE*LISEGT
Trigger: AGTGCCTTCAGATATTAAGCATTCCACAACATCGTG...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCTTCTTTTCCCAGCATTaGAGTTTTCATGAACTCTGC +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTFFSQH*SFHELC
Trigger: GCAGAGTTCATGAAAACTGCAATGCTGGGAAAAGAA...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCATATTACTGTTGGCATaGTGTTGTATGCTTTTAGTG +
Preference number: 4 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTILLLA*CCMLLV
Trigger: CACTAAAAGCATACAACAGCATGCCAACAGTAATAT...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCGAAGTGACCCTTTCATaGACAGATAAATTTCGCATC +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTEVTLS*TDKFRI
Trigger: GATGCGAAATTTATCTGTGCATGAAAGGGTCACTTC...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAGTTCAAGTTTTTCTTTaGTCCACAATGGTGATCTGG +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTVQVFL*STMVIW
Trigger: CCAGATCACCATTGTGGACCAAAGAAAAACTTGAAC...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACCATCCTCTCAAAACACATAATGACTTTGCCTTTAGATGGACTCAAACCTAATGTTCAAGTTTTTCTTTaGTCCACAATGGTGATCTGG +
Preference number: 4 (lower is better)
Translates to: TILSKHIMTLPLDGLKPNVQVFL*STMVIW
Trigger: CCAGATCACCATTGTGGACCAAAGAAAAACTTGAAC...ATTAGGTTTGAGTCCATCTAAAGGCAAAGTCATTATGTGTTTTGAGAGGATGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCAAACTGTCCTGTTTTTaGGTAGCATTCCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTKLSCF*VAFHLP
Trigger: AGGAAGATGGAATGCTACCCAAAAACAGGACAGTTT...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACCATCTATTTTTCTGCTaGGGTCATCAGGGGCAATTT +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDHLFFC*GHQGQF
Trigger: AAATTGCCCCTGATGACCCCAGCAGAAAAATAGATG...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACATCCACCGTGTCTTGTTaGCAGGAATTTTCAAATCTA +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTSTVSC*QEFSNL
Trigger: TAGATTTGAAAATTCCTGCCAACAAGACACGGTGGA...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAATTTCAGGGTCAGCATaGGCATCTTCCTTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITISGSA*ASSFSL
Trigger: TAAAGAAAAGGAAGATGCCCATGCTGACCCTGAAAT...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACTTTTTCAAAGGCTTGTaGTCTTCTGCATCACTGTAT +
Preference number: 4 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHFFKGL*SSASLY
Trigger: ATACAGTGATGCAGAAGACCACAAGCCTTTGAAAAA...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCGTCTTCAAGAAGTTTTaGATCAAGAGGTACTTCCAG +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTVFKKF*IKRYFQ
Trigger: CTGGAAGTACCTCTTGATCCAAAACTTCTTGAAGAC...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACATCACAAAAGATTTTGTaGAACGTTGTGTGCAACGTT +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITSQKIL*NVVCNV
Trigger: AACGTTGCACACAACGTTTCACAAAATCTTTTGTGA...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCTCACAAAAGATTTTGTaGAACGTTGTGTGCAACGTT +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTSQKIL*NVVCNV
Trigger: AACGTTGCACACAACGTTTCACAAAATCTTTTGTGA...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp ACCATCCTCTCAAAACACATAATGACTTTGCCTTTAGATGGACTCAAACCTAATTCACAAAAGATTTTGTaGAACGTTGTGTGCAACGTT +
Preference number: 4 (lower is better)
Translates to: TILSKHIMTLPLDGLKPNSQKIL*NVVCNV
Trigger: AACGTTGCACACAACGTTTCACAAAATCTTTTGTGA...ATTAGGTTTGAGTCCATCTAAAGGCAAAGTCATTATGTGTTTTGAGAGGATGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR TCA 90 bp ACCATCCTCTCAAAACACATAATGACTTTGCCTTTAGATGGACTCAAACCTAATGACCACTTTGAAGTGTaGTTGGTTCAAGTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: TILSKHIMTLPLDGLKPNDHFEV*LVQVFL
Trigger: AAGAAAAACTTGAACCAATCACACTTCAAAGTGGTC...ATTAGGTTTGAGTCCATCTAAAGGCAAAGTCATTATGTGTTTTGAGAGGATGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR TCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACACTTTGTGGAAGTCTTTaGAAGGAATTATCCATCCAA +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTLCGSL*KELSIQ
Trigger: TTGGATGGATAATTCCTTTCAAAGACTTCCACAAAG...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACACTTTGTGGAAGTCTTTaGAAGGAATTATCCATCCAA +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITLCGSL*KELSIQ
Trigger: TTGGATGGATAATTCCTTTCAAAGACTTCCACAAAG...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCCTTTGTGGAAGTCTTTaGAAGGAATTATCCATCCAA +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTLCGSL*KELSIQ
Trigger: TTGGATGGATAATTCCTTTCAAAGACTTCCACAAAG...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp ACATTAGTACAAACCTGTGACAGGCACCCATTTAGTTATTCTCTTCCTTTTTCTCTTTGTGGAAGTCTTTaGAAGGAATTATCCATCCAA +
Preference number: 4 (lower is better)
Translates to: TLVQTCDRHPFSYSLPFSLCGSL*KELSIQ
Trigger: TTGGATGGATAATTCCTTTCAAAGACTTCCACAAAG...AGAAAAAGGAAGAGAATAACTAAATGGGTGCCTGTCACAGGTTTGTACTAATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR TCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCCTTCTGAAACATGAATaGTCTGCAAGGTTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTLLKHE*SARFSQ
Trigger: TTGAGAAAACCTTGCAGATCATTCATGTTTCAGAAG...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACACTTCTGAAACATGAATaGTCTGCAAGGTTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITLLKHE*SARFSQ
Trigger: TTGAGAAAACCTTGCAGATCATTCATGTTTCAGAAG...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACATCTTTGATTTCTAAGTaGACTTCATTCTTCGCCATC +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTSLISK*TSFFAI
Trigger: GATGGCGAAGAATGAAGTTCACTTAGAAATCAAAGA...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp ACATTAGTACAAACCTGTGACAGGCACCCATTTAGTTATTCTCTTCCTTTTTCTTCTTTGATTTCTAAGTaGACTTCATTCTTCGCCATC +
Preference number: 4 (lower is better)
Translates to: TLVQTCDRHPFSYSLPFSSLISK*TSFFAI
Trigger: GATGGCGAAGAATGAAGTTCACTTAGAAATCAAAGA...AGAAAAAGGAAGAGAATAACTAAATGGGTGCCTGTCACAGGTTTGTACTAATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR TCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCACACTTTTGTCAAGTTaGTCTGTCAGTTCTAAGTCA +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTTLLSS*SVSSKS
Trigger: TGACTTAGAACTGACAGATCAACTTGACAAAAGTGT...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp ACATTAGTACAAACCTGTGACAGGCACCCATTTAGTTATTCTCTTCCTTTTTCTACACTTTTGTCAAGTTaGTCTGTCAGTTCTAAGTCA +
Preference number: 4 (lower is better)
Translates to: TLVQTCDRHPFSYSLPFSTLLSS*SVSSKS
Trigger: TGACTTAGAACTGACAGATCAACTTGACAAAAGTGT...AGAAAAAGGAAGAGAATAACTAAATGGGTGCCTGTCACAGGTTTGTACTAATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR TCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGGTTTTTATCTGGTTCTaGGGCTTTCGTCAAATACTG +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKREVFIWF*GFRQIL
Trigger: CAGTATTTGACGAAAGCCTCAGAACCAGATAAAAAC...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACATGTCCACAAAGACATTaGAGTTCTAGAGAATACTAC +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITCPQRH*SSREYY
Trigger: GTAGTATTCTCTAGAACTTCAATGTCTTTGTGGACA...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCTGTCCACAAAGACATTaGAGTTCTAGAGAATACTAC +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTCPQRH*SSREYY
Trigger: GTAGTATTCTCTAGAACTTCAATGTCTTTGTGGACA...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACGGAATGCTTAATATCTaGAGGCACTGTATGTGTCTT +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDGMLNI*RHCMCL
Trigger: AAGACACATACAGTGCCTTCAGATATTAAGCATTCC...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCGGCATTATTTTAAGCTaGATTAGCTTAACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTGIILS*ISLTPA
Trigger: AGCAGGAGTTAAGCTAATGCAGCTTAAAATAATGCC...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAGGCATTATTTTAAGCTaGATTAGCTTAACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITGIILS*ISLTPA
Trigger: AGCAGGAGTTAAGCTAATGCAGCTTAAAATAATGCC...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp ACCATCCTCTCAAAACACATAATGACTTTGCCTTTAGATGGACTCAAACCTAATGGCATTATTTTAAGCTaGATTAGCTTAACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: TILSKHIMTLPLDGLKPNGIILS*ISLTPA
Trigger: AGCAGGAGTTAAGCTAATGCAGCTTAAAATAATGCC...ATTAGGTTTGAGTCCATCTAAAGGCAAAGTCATTATGTGTTTTGAGAGGATGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR GCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAATATTTGGATACATTTaGCACAACCACAGATGTCCA +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITIFGYI*HNHRCP
Trigger: TGGACATCTGTGGTTGTGGCAAATGTATCCAAATAT...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAATATTTGGATACATTTaGCACAACCACAGATGTCCA +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTIFGYI*HNHRCP
Trigger: TGGACATCTGTGGTTGTGGCAAATGTATCCAAATAT...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCATCCACAGTTGTTACTaGTTCCTCTGTAATTTGACT +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTIHSCY*FLCNLT
Trigger: AGTCAAATTACAGAGGAAGCAGTAACAACTGTGGAT...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCAATGCCGAAATGCACTaGAATACACATTGTTTATGC +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTNAEMH*NTHCLC
Trigger: GCATAAACAATGTGTATTGCAGTGCATTTCGGCATT...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAAATGCCGAAATGCACTaGAATACACATTGTTTATGC +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITNAEMH*NTHCLC
Trigger: GCATAAACAATGTGTATTGCAGTGCATTTCGGCATT...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACCACGATGTTGTGGAATaGTTAATATCTGAAGGCACT +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYHDVVE*LISEGT
Trigger: AGTGCCTTCAGATATTAAGCATTCCACAACATCGTG...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCCACAAAATCATCATGTaGTTCAGTTGGCAACAAAGA +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTHKIIM*FSWQQR
Trigger: TCTTTGTTGCCAACTGAAGCACATGATGATTTTGTG...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACACACAAAATCATCATGTaGTTCAGTTGGCAACAAAGA +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITHKIIM*FSWQQR
Trigger: TCTTTGTTGCCAACTGAAGCACATGATGATTTTGTG...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGGAAGTGACCCTTTCATaGACAGATAAATTTCGCATC +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKREEVTLS*TDKFRI
Trigger: GATGCGAAATTTATCTGTGCATGAAAGGGTCACTTC...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACGAAGTGACCCTTTCATaGACAGATAAATTTCGCATC +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYEVTLS*TDKFRI
Trigger: GATGCGAAATTTATCTGTGCATGAAAGGGTCACTTC...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCTTCTTCTTTGCTGCCTaGTACACCATATTCAACATA +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTFFFAA*YTIFNI
Trigger: TATGTTGAATATGGTGTAGCAGGCAGCAAAGAAGAA...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379028.8
CDS-3UTR CCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACTCCACCGTGTCTTGTTaGCAGGAATTTTCAAATCTA +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYSTVSC*QEFSNL
Trigger: TAGATTTGAAAATTCCTGCCAACAAGACACGGTGGA...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACTCCACCGTGTCTTGTTaGCAGGAATTTTCAAATCTA +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDSTVSC*QEFSNL
Trigger: TAGATTTGAAAATTCCTGCCAACAAGACACGGTGGA...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGTCACAAAAGATTTTGTaGAACGTTGTGTGCAACGTT +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKRESQKIL*NVVCNV
Trigger: AACGTTGCACACAACGTTTCACAAAATCTTTTGTGA...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACGACCACTTTGAAGTGTaGTTGGTTCAAGTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDDHFEV*LVQVFL
Trigger: AAGAAAAACTTGAACCAATCACACTTCAAAGTGGTC...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACGACCACTTTGAAGTGTaGTTGGTTCAAGTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYDHFEV*LVQVFL
Trigger: AAGAAAAACTTGAACCAATCACACTTCAAAGTGGTC...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACCTTCTGAAACATGAATaGTCTGCAAGGTTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYLLKHE*SARFSQ
Trigger: TTGAGAAAACCTTGCAGATCATTCATGTTTCAGAAG...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGTCTTTGATTTCTAAGTaGACTTCATTCTTCGCCATC +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKRESLISK*TSFFAI
Trigger: GATGGCGAAGAATGAAGTTCACTTAGAAATCAAAGA...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACACACTTTTGTCAAGTTaGTCTGTCAGTTCTAAGTCA +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYTLLSS*SVSSKS
Trigger: TGACTTAGAACTGACAGATCAACTTGACAAAAGTGT...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGTCTGTTTCTTTTAGATaGACTCTGGGTCTTCCAATA +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKRESVSFR*TLGLPI
Trigger: TATTGGAAGACCCAGAGTTCATCTAAAAGAAACAGA...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR TCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACTGTCCACAAAGACATTaGAGTTCTAGAGAATACTAC +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYCPQRH*SSREYY
Trigger: GTAGTATTCTCTAGAACTTCAATGTCTTTGTGGACA...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp ACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGTTTCTTTGTTACTTGCATTaGCTTCTGGAGTTAAAAATG +
Preference number: 4 (lower is better)
Translates to: TCIKLTFHRARTIQGFEFLCYLH*LLELKM
Trigger: CATTTTTAACTCCAGAAGGCAATGCAAGTAACAAAG...AAACTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR GCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCGTGGAGCATTTTTCATaGATCATATTGAACTGTATC +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTVEHFS*IILNCI
Trigger: GATACAGTTCAATATGATGCATGAAAAATGCTCCAC...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACCACAAAATCATCATGTaGTTCAGTTGGCAACAAAGA +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYHKIIM*FSWQQR
Trigger: TCTTTGTTGCCAACTGAAGCACATGATGATTTTGTG...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCATATTACTGTTGGCATaGTGTTGTATGCTTTTAGTG +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTILLLA*CCMLLV
Trigger: CACTAAAAGCATACAACAGCATGCCAACAGTAATAT...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCAATAATGTAATCTTTTaGAGACTGTTGGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTNNVIF*RLLGDG
Trigger: ACCATCACCCAACAGTCTCCAAAAGATTACATTATT...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAAATAATGTAATCTTTTaGAGACTGTTGGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITNNVIF*RLLGDG
Trigger: ACCATCACCCAACAGTCTCCAAAAGATTACATTATT...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAAACTCTCTCACTTTGTaGAAGTCTTTGAAAGGAATT +
Preference number: 4 (lower is better)
Translates to: CGAFFMHHIELYPAEEITNSLTL*KSLKGI
Trigger: AATTCCTTTCAAAGACTTCCACAAAGTGAGAGAGTT...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCAACTCTCTCACTTTGTaGAAGTCTTTGAAAGGAATT +
Preference number: 4 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTNSLTL*KSLKGI
Trigger: AATTCCTTTCAAAGACTTCCACAAAGTGAGAGAGTT...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACATTAGTACAAACCTGTGACAGGCACCCATTTAGTTATTCTCTTCCTTTTTCTAACTCTCTCACTTTGTaGAAGTCTTTGAAAGGAATT +
Preference number: 4 (lower is better)
Translates to: TLVQTCDRHPFSYSLPFSNSLTL*KSLKGI
Trigger: AATTCCTTTCAAAGACTTCCACAAAGTGAGAGAGTT...AGAAAAAGGAAGAGAATAACTAAATGGGTGCCTGTCACAGGTTTGTACTAATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CCA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACACTGAGACAATATATTTaGATACATTTGCCACAACCA +
Preference number: 4 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTLRQYI*IHLPQP
Trigger: TGGTTGTGGCAAATGTATCCAAATATATTGTCTCAG...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACTTTTTCAAAGGCTTGTaGTCTTCTGCATCACTGTAT +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDFFKGL*SSASLY
Trigger: ATACAGTGATGCAGAAGACCACAAGCCTTTGAAAAA...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
3UTR CAA 72 bp TGCTGCAGAGTTTTGAACACTTACATAGGTAAAGTCTaGGAGAATAATATATTACTGTTGGCATGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: CCRVLNTYIGKV*ENNILLLACCC
Trigger: ACAACAGCATGCCAACAGTAATATATTATTCTCCAAGACTTTACCTATGTAAGTGTTCAAAACTCTGCAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGCTTTGTTACTTGCATTaGCTTCTGGAGTTAAAAATG +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKRELCYLH*LLELKM
Trigger: CATTTTTAACTCCAGAAGGCAATGCAAGTAACAAAG...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGGTGGAGCATTTTTCATaGATCATATTGAACTGTATC +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKREVEHFS*IILNCI
Trigger: GATACAGTTCAATATGATGCATGAAAAATGCTCCAC...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR GCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGATATTACTGTTGGCATaGTGTTGTATGCTTTTAGTG +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKREILLLA*CCMLLV
Trigger: CACTAAAAGCATACAACAGCATGCCAACAGTAATAT...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAATAATGTAATCTTTTaGAGACTGTTGGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYNNVIF*RLLGDG
Trigger: ACCATCACCCAACAGTCTCCAAAAGATTACATTATT...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACAACTCTCTCACTTTGTaGAAGTCTTTGAAAGGAATT +
Preference number: 4 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDNSLTL*KSLKGI
Trigger: AATTCCTTTCAAAGACTTCCACAAAGTGAGAGAGTT...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACCTGAGACAATATATTTaGATACATTTGCCACAACCA +
Preference number: 4 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYLRQYI*IHLPQP
Trigger: TGGTTGTGGCAAATGTATCCAAATATATTGTCTCAG...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CCA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGCTGAGACAATATATTTaGATACATTTGCCACAACCA +
Preference number: 4 (lower is better)
Translates to: TITWTFTLNWEHKLQKRELRQYI*IHLPQP
Trigger: TGGTTGTGGCAAATGTATCCAAATATATTGTCTCAG...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS GCA 90 bp AAGATTCGTTCTCGCGCCGCGCCCTCCGCTCAGCTCTGGCGCGACTaGCCAGGACCCTGGACCGCCGGTGTCCTCCGTTCTCGACGAAGC +
Preference number: 5 (lower is better)
Translates to: KIRSRAAPSAQLWRD*PGPWTAGVLRSRRS
Trigger: GCTTCGTCGAGAACGGAGGACACCGGCGGTCCAGGGTCCTGGGCAGTCGCGCCAGAGCTGAGCGGAGGGCGCGGCGCGAGAACGAATCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
ENST00000613830.4
CDS CCA 90 bp AATGTCACAAAGATTCGTTCTCGCGCCGCGCCCTCCGCTCAGCTCTaGCGCGACTGCCCAGGACCCTGGACCGCCGGTGTCCTCCGTTCT +
Preference number: 5 (lower is better)
Translates to: NVTKIRSRAAPSAQL*RDCPGPWTAGVLRS
Trigger: AGAACGGAGGACACCGGCGGTCCAGGGTCCTGGGCAGTCGCGCCAGAGCTGAGCGGAGGGCGCGGCGCGAGAACGAATCTTTGTGACATT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000613830.4
CDS TCA 90 bp CGTTCCCAGGAGCCACCATTGGGAGGTCTTCTCCAGAATGTCCCATaGCTACAGCTGGCTCGGGGGCAAACCCCATGTCATTCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: RSQEPPLGGLLQNVP*LQLARGQTPCHSGP
Trigger: AGGCCCTGAATGACATGGGGTTTGCCCCCGAGCCAGCTGTAGTCATGGGACATTCTGGAGAAGACCTCCCAATGGTGGCTCCTGGGAACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS TCA 90 bp TGCTGTGGCTGGCCCATGTGCAGTAAAATGTTAAAGTCCTGCTCCTaGCAGCCAATCCAAAGCTGCTCAGACCTCCCAGGCCTCCCAGGG +
Preference number: 5 (lower is better)
Translates to: CCGWPMCSKMLKSCS*QPIQSCSDLPGLPG
Trigger: CCCTGGGAGGCCTGGGAGGTCTGAGCAGCTTTGGATTGGCTGTCAGGAGCAGGACTTTAACATTTTACTGCACATGGGCCAGCCACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456431.5
CDS TCA 90 bp CACCTGCCGGCTTGCCATCGCTGGGCCTGTCTCAAACACATCCTCTaGACTCACAAAACCAGAGTCCCCCACAGCACCAACTCGAACTTT +
Preference number: 5 (lower is better)
Translates to: HLPACHRWACLKHIL*THKTRVPHSTNSNF
Trigger: AAAGTTCGAGTTGGTGCTGTGGGGGACTCTGGTTTTGTGAGTTCAGAGGATGTGTTTGAGACAGGCCCAGCGATGGCAAGCCGGCAGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379022.8
ENST00000379028.8
CDS CCA 90 bp CGCGGAAGGAGTAGTTCACGTAAGGAGACAGCTTCAGCTGGGCTGTaGTCTGTGTTCCAGAAACTTCAGTTTGGTGGTGCCACAGCCCTG +
Preference number: 5 (lower is better)
Translates to: RGRSSSRKETASAGL*SVFQKLQFGGATAL
Trigger: CAGGGCTGTGGCACCACCAAACTGAAGTTTCTGGAACACAGACCACAGCCCAGCTGAAGCTGTCTCCTTACGTGAACTACTCCTTCCGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000613830.4
CDS GCA 90 bp CCTTGTAGGTGTCCTCGGATGCTTTTCAGAGGTACTGGGTCCCAGTaGACCTCGGCTAAGGTACTGTTCACCACATTCACACGCACGTTC +
Preference number: 5 (lower is better)
Translates to: PCRCPRMLFRGTGSQ*TSAKVLFTTFTRTF
Trigger: GAACGTGCGTGTGAATGTGGTGAACAGTACCTTAGCCGAGGTGCACTGGGACCCAGTACCTCTGAAAAGCATCCGAGGACACCTACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS CCA 90 bp GGAGGCTGTACCAGATCAAGAGGTACTTCCAGTGCACTAATCATCTaGCACAGGAAGAGAATCAGGGGCACTCTGCCCGCAGATAAGCGC +
Preference number: 5 (lower is better)
Translates to: GGCTRSRGTSSALII*HRKRIRGTLPADKR
Trigger: GCGCTTATCTGCGGGCAGAGTGCCCCTGATTCTCTTCCTGTGCCAGATGATTAGTGCACTGGAAGTACCTCTTGATCTGGTACAGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000417701.5
ENST00000419936.5
ENST00000456431.5
ENST00000613830.4
CDS CCA 90 bp AGCCACCATTGGGAGGTCTTCTCCAGAATGTCCCATGACTACAGCTaGCTCGGGGGCAAACCCCATGTCATTCAGGGCCTGAACTTTGAT +
Preference number: 5 (lower is better)
Translates to: SHHWEVFSRMSHDYS*LGGKPHVIQGLNFD
Trigger: ATCAAAGTTCAGGCCCTGAATGACATGGGGTTTGCCCCCGAGCCAGCTGTAGTCATGGGACATTCTGGAGAAGACCTCCCAATGGTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS CCA 90 bp CGGGTGGCTCGGTGGATCCCATTCCAAAGTGAGAGAGTCCAGTGTTaGATTCACAATCTTCAAAGACGAGGGAGCACTGGGGACTCCTTC +
Preference number: 5 (lower is better)
Translates to: RVARWIPFQSERVQC*IHNLQRRGSTGDSF
Trigger: GAAGGAGTCCCCAGTGCTCCCTCGTCTTTGAAGATTGTGAATCCAACACTGGACTCTCTCACTTTGGAATGGGATCCACCGAGCCACCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS CCA 90 bp AACGTCTTCTTAGCATTGCTCTGGGCTGTGACAAAGGCAGAGCAGTaGACAGCTCCCAAGTTCTGCAGTCTCCAACTCTCCTCTCGTCAG +
Preference number: 5 (lower is better)
Translates to: NVFLALLWAVTKAEQ*TAPKFCSLQLSSRQ
Trigger: CTGACGAGAGGAGAGTTGGAGACTGCAGAACTTGGGAGCTGTCCACTGCTCTGCCTTTGTCACAGCCCAGAGCAATGCTAAGAAGACGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419936.5
CDS GCA 90 bp GGGTCTTCCAATAGTAAATCCGATAGCCTTGTAGGTGTCCTCGGATaGTTTTCAGAGGTACTGGGTCCCAGTGCACCTCGGCTAAGGTAC +
Preference number: 5 (lower is better)
Translates to: GSSNSKSDSLVGVLG*FSEVLGPSAPRLRY
Trigger: GTACCTTAGCCGAGGTGCACTGGGACCCAGTACCTCTGAAAAGCATCCGAGGACACCTACAAGGCTATCGGATTTACTATTGGAAGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS TCA 90 bp ACCAGCTTTTGTCGAAGTCTTCAGCAAACAGGGGATAAAGAATGCTaGGAGAGAATGTCACAAAGATTCGTTCTCGCGCCGCGCCCTCCG +
Preference number: 5 (lower is better)
Translates to: TSFCRSLQQTGDKEC*ERMSQRFVLAPRPP
Trigger: CGGAGGGCGCGGCGCGAGAACGAATCTTTGTGACATTCTCTCTCAGCATTCTTTATCCCCTGTTTGCTGAAGACTTCGACAAAAGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000613830.4
CDS TCA 90 bp CAGCTGGCTCGGGGGCAAACCCCATGTCATTCAGGGCCTGAACTTTaGTCAGGTATGGAACAAAGGTTGGCGTGCCTGAGACAATATATT +
Preference number: 5 (lower is better)
Translates to: QLARGQTPCHSGPEL*SGMEQRLACLRQYI
Trigger: AATATATTGTCTCAGGCACGCCAACCTTTGTTCCATACCTGATCAAAGTTCAGGCCCTGAATGACATGGGGTTTGCCCCCGAGCCAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS CCA 90 bp AGCTTCAGCTGGGCTGTGGTCTGTGTTCCAGAAACTTCAGTTTGGTaGTGCCACAGCCCTGGCTTGTGCATTGCATCTTCATATTCGATG +
Preference number: 5 (lower is better)
Translates to: SFSWAVVCVPETSVW*CHSPGLCIASSYSM
Trigger: CATCGAATATGAAGATGCAATGCACAAGCCAGGGCTGTGGCACCACCAAACTGAAGTTTCTGGAACACAGACCACAGCCCAGCTGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000613830.4
CDS-3UTR CAA 90 bp ACCGTGCTCGCACGATTCAAGGTTTTGAGTTTCAGTAACTCATTCCTGATTCAGGGGTCCAGGAAAAGCTaGGGGGCGGTTTCCCTTTGG +
Preference number: 5 (lower is better)
Translates to: TVLARFKVLSFSNSFLIQGSRKS*GAVSLW
Trigger: CCAAAGGGAAACCGCCCCCAAGCTTTTCCTGGACCC...CTGAATCAGGAATGAGTTACTGAAACTCAAAACCTTGAATCGTGCGAGCACGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS TCA 90 bp CTGTCAAAATGCCATTCGGGTGGCTCGGTGGATCCCATTCCAAAGTaGGAGAGTCCAGTGTTGGATTCACAATCTTCAAAGACGAGGGAG +
Preference number: 5 (lower is better)
Translates to: LSKCHSGGSVDPIPK*ESPVLDSQSSKTRE
Trigger: CTCCCTCGTCTTTGAAGATTGTGAATCCAACACTGGACTCTCTCACTTTGGAATGGGATCCACCGAGCCACCCGAATGGCATTTTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000465585.1
CDS GCA 90 bp TTCAGCTGGGCTGTGGTCTGTGTTCCAGAAACTTCAGTTTGGTGGTaGCACAGCCCTGGCTTGTGCATTGCATCTTCATATTCGATGATG +
Preference number: 5 (lower is better)
Translates to: FSWAVVCVPETSVWW*HSPGLCIASSYSMM
Trigger: CATCATCGAATATGAAGATGCAATGCACAAGCCAGGGCTGTGGCACCACCAAACTGAAGTTTCTGGAACACAGACCACAGCCCAGCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000613830.4
CDS CCA 90 bp TCAAGAAGTTTTGGATCAAGAGGTACTTCCAGTGCACTAATCATCTaGCACAGGAAGAGAATCAGGGGCACTCTGCCCGCAGATAAGCGC +
Preference number: 5 (lower is better)
Translates to: SRSFGSRGTSSALII*HRKRIRGTLPADKR
Trigger: GCGCTTATCTGCGGGCAGAGTGCCCCTGATTCTCTTCCTGTGCCAGATGATTAGTGCACTGGAAGTACCTCTTGATCCAAAACTTCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000418239.1
ENST00000442580.5
CDS-3UTR CAA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGGGTCCAGGAAAAGCTaGGGGGCGGTTTCCCTTTGG +
Preference number: 5 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPGSRKS*GAVSLW
Trigger: CCAAAGGGAAACCGCCCCCAAGCTTTTCCTGGACCC...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATCTGGGCAGTTCCCTGTaGTCCTTCAGCCACAGGACA +
Preference number: 5 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDLGSSL*SFSHRT
Trigger: TGTCCTGTGGCTGAAGGACAACAGGGAACTGCCCAG...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS GCA 90 bp CATCCCAGCACATTTCTGCAGATAAAAGCACTGGCAATTGAACCCTaGTGTGGCTGGCCCATGTGCAGTAAAATGTTAAAGTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: HPSTFLQIKALAIEP*CGWPMCSKMLKSCS
Trigger: GGAGCAGGACTTTAACATTTTACTGCACATGGGCCAGCCACAGCAGGGTTCAATTGCCAGTGCTTTTATCTGCAGAAATGTGCTGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456431.5
CDS GCA 90 bp AAAGAAACAAACAAAGAAAGCTGCAGGCTTCCAACAGAGGGTAACTaGTTGGGGGTGGGTGTCAGAGTAGGGGCACAGGGTTATAGCATA +
Preference number: 5 (lower is better)
Translates to: KETNKESCRLPTEGN*LGVGVRVGAQGYSI
Trigger: TATGCTATAACCCTGTGCCCCTACTCTGACACCCACCCCCAAGCAGTTACCCTCTGTTGGAAGCCTGCAGCTTTCTTTGTTTGTTTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522550.2
CDS-3UTR CAA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATGGGGGCGGTTTCCCTTaGGCTTCACACTGGATTACA +
Preference number: 5 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDGGGFP*ASHWIT
Trigger: TGTAATCCAGTGTGAAGCCAAAGGGAAACCGCCCCC...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTCTGGGCAGTTCCCTGTaGTCCTTCAGCCACAGGACA +
Preference number: 5 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPLGSSL*SFSHRT
Trigger: TGTCCTGTGGCTGAAGGACAACAGGGAACTGCCCAG...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATTCCAGAAACTTCAGTTaGGTGGTGCCACAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDSRNFS*VVPQPW
Trigger: CCAGGGCTGTGGCACCACCAAACTGAAGTTTCTGGA...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATCCCTCCCCTTTCCCATaGACCACTCGGACATTCAGT +
Preference number: 5 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDPSPFP*TTRTFS
Trigger: ACTGAATGTCCGAGTGGTCAATGGGAAAGGGGAGGG...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS GCA 90 bp GCGGACAACAATGTTATTAGAAACTGCAGCTCCGCGTTCGTTCCTTaGTGTACACTGATAGACTCCTTCATAGGTCTCAGCTTTCCCTTC +
Preference number: 5 (lower is better)
Translates to: ADNNVIRNCSSAFVP*CTLIDSFIGLSFPF
Trigger: GAAGGGAAAGCTGAGACCTATGAAGGAGTCTATCAGTGTACAGCAAGGAACGAACGCGGAGCTGCAGTTTCTAATAACATTGTTGTCCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000417701.5
ENST00000613830.4
CDS GCA 90 bp CTGTACCAAGTCTTCAAGAAGTTTTGGATCAAGAGGTACTTCCAGTaGACTAATCATCTGGCACAGGAAGAGAATCAGGGGCACTCTGCC +
Preference number: 5 (lower is better)
Translates to: LYQVFKKFWIKRYFQ*TNHLAQEENQGHSA
Trigger: GGCAGAGTGCCCCTGATTCTCTTCCTGTGCCAGATGATTAGTGCACTGGAAGTACCTCTTGATCCAAAACTTCTTGAAGACTTGGTACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000418239.1
ENST00000442580.5
CDS-3UTR CAA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACGGGTCCAGGAAAAGCTaGGGGGCGGTTTCCCTTTGG +
Preference number: 5 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHGSRKS*GAVSLW
Trigger: CCAAAGGGAAACCGCCCCCAAGCTTTTCCTGGACCC...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATGTGGTGGTAATCCAATaGGGGGTCTGCAGGGAAGTA +
Preference number: 5 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDVVVIQ*GVCREV
Trigger: TACTTCCCTGCAGACCCCCAATTGGATTACCACCAC...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATGTAATGGGGCTATTGTaGTCATCGCCTGGGGTCCAT +
Preference number: 5 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDVMGLL*SSPGVH
Trigger: ATGGACCCCAGGCGATGACAACAATAGCCCCATTAC...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTTCCAGAAACTTCAGTTaGGTGGTGCCACAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPSRNFS*VVPQPW
Trigger: CCAGGGCTGTGGCACCACCAAACTGAAGTTTCTGGA...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACATATCCACCTGCCGGCTaGCCATCGCTGGGCCTGTCT +
Preference number: 5 (lower is better)
Translates to: CGAFFMHHIELYPAEEITYPPAG*PSLGLS
Trigger: AGACAGGCCCAGCGATGGCAAGCCGGCAGGTGGATA...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379028.8
CDS TCA 90 bp TTTCATCACTGGGCAGTTCCCTGTTGTCCTTCAGCCACAGGACAGTaGGGGATAAGGTGTGATCATGTTTCACTTTGCATTCAAAGGACA +
Preference number: 5 (lower is better)
Translates to: FHHWAVPCCPSATGQ*GIRCDHVSLCIQRT
Trigger: TGTCCTTTGAATGCAAAGTGAAACATGATCACACCTTATCCCTCACTGTCCTGTGGCTGAAGGACAACAGGGAACTGCCCAGTGATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000613830.4
CDS-3UTR CAA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATATCTTTTGGAGACTGTaGGGTGATGGTTGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDIFWRL*GDGWRL
Trigger: CAGCCTCCAACCATCACCCAACAGTCTCCAAAAGAT...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCGGGGGCGGTTTCCCTTaGGCTTCACACTGGATTACA +
Preference number: 5 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTGGGFP*ASHWIT
Trigger: TGTAATCCAGTGTGAAGCCAAAGGGAAACCGCCCCC...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAGGGTCCAGGAAAAGCTaGGGGGCGGTTTCCCTTTGG +
Preference number: 5 (lower is better)
Translates to: CGAFFMHHIELYPAEEITGSRKS*GAVSLW
Trigger: CCAAAGGGAAACCGCCCCCAAGCTTTTCCTGGACCC...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATGGACAGCACAAGATTTaGAGGGGCTGTGATCCAGTA +
Preference number: 5 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDGQHKI*RGCDPV
Trigger: TACTGGATCACAGCCCCTCAAAATCTTGTGCTGTCC...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATCAGCTAATTCTGGGTTaGGGGTTGCCATTAGCTCTG +
Preference number: 5 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDQLILG*GLPLAL
Trigger: CAGAGCTAATGGCAACCCCAAACCCAGAATTAGCTG...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATTTTGTAATGGGGCTATaGTTGTCATCGCCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDFVMGL*LSSPGV
Trigger: GACCCCAGGCGATGACAACAATAGCCCCATTACAAA...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATAAGGAATTCATGGCGTaGACAGGAGAAGGTGCCTCT +
Preference number: 5 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDKEFMA*TGEGAS
Trigger: AGAGGCACCTTCTCCTGTCAACGCCATGAATTCCTT...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATAGTCAAAGGGAGGATTaGGGACATCGTAAACGGGAG +
Preference number: 5 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDSQRED*GHRKRE
Trigger: CTCCCGTTTACGATGTCCCAAATCCTCCCTTTGACT...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACATATCCACCTGCCGGCTaGCCATCGCTTTGCCTGCAC +
Preference number: 5 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTYPPAG*PSLCLH
Trigger: GTGCAGGCAAAGCGATGGCAAGCCGGCAGGTGGATA...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379024.8
ENST00000413765.6
CDS GCA 90 bp TGGTCCCTCATATTCCCAACTGATATTGGCATAGGTCTCAGCAGCTaGAGCAGTAAGATTGCTGATCCTGGGATTTACTGCTTGAACTTT +
Preference number: 5 (lower is better)
Translates to: WSLIFPTDIGIGLSS*SSKIADPGIYCLNF
Trigger: AAAGTTCAAGCAGTAAATCCCAGGATCAGCAATCTTACTGCTGCAGCTGCTGAGACCTATGCCAATATCAGTTGGGAATATGAGGGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379022.8
ENST00000379028.8
ENST00000445634.2
CDS CCA 90 bp CATCGTGCCTGCTACACCATATTCAACATAAAAGTTCACATGCTCTaGTCCCTCATATTCCCAACTGATATTGGCATAGGTCTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: HRACYTIFNIKVHML*SLIFPTDIGIGLSS
Trigger: GCTGCTGAGACCTATGCCAATATCAGTTGGGAATATGAGGGACCAGAGCATGTGAACTTTTATGTTGAATATGGTGTAGCAGGCACGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445634.2
CDS-3UTR CAA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACGGGTCCAGGAAAAGCTaGGGGGCGGTTTCCCTTTGG +
Preference number: 5 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDGSRKS*GAVSLW
Trigger: CCAAAGGGAAACCGCCCCCAAGCTTTTCCTGGACCC...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCCTCCGCGTTCGTTCCTaGCTGTACACTGATAGACTC +
Preference number: 5 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTLRVRS*LYTDRL
Trigger: GAGTCTATCAGTGTACAGCAAGGAACGAACGCGGAG...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTATTCTGGGTTTGGGGTaGCCATTAGCTCTGCAGATC +
Preference number: 5 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPILGLG*PLALQI
Trigger: GATCTGCAGAGCTAATGGCAACCCCAAACCCAGAAT...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTCAGCTAATTCTGGGTTaGGGGTTGCCATTAGCTCTG +
Preference number: 5 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPQLILG*GLPLAL
Trigger: CAGAGCTAATGGCAACCCCAAACCCAGAATTAGCTG...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATTCCTGTACTGTCCTTTaGGGCCACAGGAATTTCCAA +
Preference number: 5 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDSCTVL*GHRNFQ
Trigger: TTGGAAATTCCTGTGGCCCAAAAGGACAGTACAGGA...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCCTGGGCAGTTCCCTGTaGTCCTTCAGCCACAGGACA +
Preference number: 5 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTLGSSL*SFSHRT
Trigger: TGTCCTGTGGCTGAAGGACAACAGGGAACTGCCCAG...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp ACCATCCTCTCAAAACACATAATGACTTTGCCTTTAGATGGACTCAAACCTAATCTGGGCAGTTCCCTGTaGTCCTTCAGCCACAGGACA +
Preference number: 5 (lower is better)
Translates to: TILSKHIMTLPLDGLKPNLGSSL*SFSHRT
Trigger: TGTCCTGTGGCTGAAGGACAACAGGGAACTGCCCAG...ATTAGGTTTGAGTCCATCTAAAGGCAAAGTCATTATGTGTTTTGAGAGGATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CAA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCGTAATGGGGCTATTGTaGTCATCGCCTGGGGTCCAT +
Preference number: 5 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTVMGLL*SSPGVH
Trigger: ATGGACCCCAGGCGATGACAACAATAGCCCCATTAC...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTTTTGTAATGGGGCTATaGTTGTCATCGCCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPFVMGL*LSSPGV
Trigger: GACCCCAGGCGATGACAACAATAGCCCCATTACAAA...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACCCCTCCCCTTTCCCATaGACCACTCGGACATTCAGT +
Preference number: 5 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHPSPFP*TTRTFS
Trigger: ACTGAATGTCCGAGTGGTCAATGGGAAAGGGGAGGG...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCTATCCACCTGCCGGCTaGCCATCGCTTCATCCACAG +
Preference number: 5 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTYPPAG*PSLHPQ
Trigger: CTGTGGATGAAGCGATGGCAAGCCGGCAGGTGGATA...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351718.8
CDS-3UTR CAA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCCGGCTTGCCATCGCTTaGCCTGCACCTACATCAGGT +
Preference number: 5 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTRLAIA*PAPTSG
Trigger: ACCTGATGTAGGTGCAGGCAAAGCGATGGCAAGCCG...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379024.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACACGGCTTGCCATCGCTTaGCCTGCACCTACATCAGGT +
Preference number: 5 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTRLAIA*PAPTSG
Trigger: ACCTGATGTAGGTGCAGGCAAAGCGATGGCAAGCCG...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379024.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACTATCCACCTGCCGGCTaGCCATCGCTTTGCCTGCAC +
Preference number: 5 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDYPPAG*PSLCLH
Trigger: GTGCAGGCAAAGCGATGGCAAGCCGGCAGGTGGATA...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379024.8
ENST00000413765.6
CDS TCA 90 bp TTGGGGGTCTGCAGGGAAGTACTAAAGACTGACCACTTTGAAGTGTaGTTGGTTCAAGTTTTTCTTTGGTCCACAATGGTGATCTGGATG +
Preference number: 5 (lower is better)
Translates to: LGVCREVLKTDHFEV*LVQVFLWSTMVIWM
Trigger: CATCCAGATCACCATTGTGGACCAAAGAAAAACTTGAACCAATCACACTTCAAAGTGGTCAGTCTTTAGTACTTCCCTGCAGACCCCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000417701.5
ENST00000613830.4
CDS TCA 90 bp AAATTAAACAAAGGAATTCATGGCGTTGACAGGAGAAGGTGCCTCTaGGCTTTCGTTTCCTTCAGCCGGCTCTTTCTCTTTCTTACCACT +
Preference number: 5 (lower is better)
Translates to: KLNKGIHGVDRRRCL*AFVSFSRLFLFLTT
Trigger: AGTGGTAAGAAAGAGAAAGAGCCGGCTGAAGGAAACGAAAGCTCAGAGGCACCTTCTCCTGTCAACGCCATGAATTCCTTTGTTTAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000522550.2
CDS CCA 90 bp CCGAGGGTCAATAATGTAATCTTTTGGAGACTGTTGGGTGATGGTTaGAGGCTGTACCAAGTCTTCAAGAAGTTTTGGATCAAGAGGTAC +
Preference number: 5 (lower is better)
Translates to: PRVNNVIFWRLLGDG*RLYQVFKKFWIKRY
Trigger: GTACCTCTTGATCCAAAACTTCTTGAAGACTTGGTACAGCCTCCAACCATCACCCAACAGTCTCCAAAAGATTACATTATTGACCCTCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000418239.1
ENST00000442580.5
CDS CCA 90 bp TTTGCTGCCTGCTACACCATATTCAACATAAAAGTTCACATGCTCTaGTCCCTCATATTCCCAACTGATATTGGCATAGGTCTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: FAACYTIFNIKVHML*SLIFPTDIGIGLSS
Trigger: GCTGCTGAGACCTATGCCAATATCAGTTGGGAATATGAGGGACCAGAGCATGTGAACTTTTATGTTGAATATGGTGTAGCAGGCAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379022.8
ENST00000379028.8
CDS-3UTR CAA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCATCTTTTGGAGACTGTaGGGTGATGGTTGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTIFWRL*GDGWRL
Trigger: CAGCCTCCAACCATCACCCAACAGTCTCCAAAAGAT...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp ACATTAGTACAAACCTGTGACAGGCACCCATTTAGTTATTCTCTTCCTTTTTCTGGGGGCGGTTTCCCTTaGGCTTCACACTGGATTACA +
Preference number: 5 (lower is better)
Translates to: TLVQTCDRHPFSYSLPFSGGGFP*ASHWIT
Trigger: TGTAATCCAGTGTGAAGCCAAAGGGAAACCGCCCCC...AGAAAAAGGAAGAGAATAACTAAATGGGTGCCTGTCACAGGTTTGTACTAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CAA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATGTCCCCATTCAAACCTaGAGAAACTCTCTCACTTTG +
Preference number: 5 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDVPIQT*RNSLTL
Trigger: CAAAGTGAGAGAGTTTCTCAAGGTTTGAATGGGGAC...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCGGACAGCACAAGATTTaGAGGGGCTGTGATCCAGTA +
Preference number: 5 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTGQHKI*RGCDPV
Trigger: TACTGGATCACAGCCCCTCAAAATCTTGTGCTGTCC...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACCACCATGCTCCCTCTTaGCACAACTGCATATTCGGG +
Preference number: 5 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHHHAPS*HNCIFG
Trigger: CCCGAATATGCAGTTGTGCAAAGAGGGAGCATGGTG...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACCTGGGCAGTTCCCTGTaGTCCTTCAGCCACAGGACA +
Preference number: 5 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDLGSSL*SFSHRT
Trigger: TGTCCTGTGGCTGAAGGACAACAGGGAACTGCCCAG...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp ACATTAGTACAAACCTGTGACAGGCACCCATTTAGTTATTCTCTTCCTTTTTCTTCCAGAAACTTCAGTTaGGTGGTGCCACAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: TLVQTCDRHPFSYSLPFSSRNFS*VVPQPW
Trigger: CCAGGGCTGTGGCACCACCAAACTGAAGTTTCTGGA...AGAAAAAGGAAGAGAATAACTAAATGGGTGCCTGTCACAGGTTTGTACTAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CAA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCCCCTCCCCTTTCCCATaGACCACTCGGACATTCAGT +
Preference number: 5 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTPSPFP*TTRTFS
Trigger: ACTGAATGTCCGAGTGGTCAATGGGAAAGGGGAGGG...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACACCCTCCCCTTTCCCATaGACCACTCGGACATTCAGT +
Preference number: 5 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTPSPFP*TTRTFS
Trigger: ACTGAATGTCCGAGTGGTCAATGGGAAAGGGGAGGG...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCAAGGAATTCATGGCGTaGACAGGAGAAGGTGCCTCT +
Preference number: 5 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTKEFMA*TGEGAS
Trigger: AGAGGCACCTTCTCCTGTCAACGCCATGAATTCCTT...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTTGCAGATGTAATCCCTaGGACCGTTGGCCTTTTAAG +
Preference number: 5 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPCRCNP*DRWPFK
Trigger: CTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCA...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCAGTCAAAGGGAGGATTaGGGACATCGTAAACGGGAG +
Preference number: 5 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTSQRED*GHRKRE
Trigger: CTCCCGTTTACGATGTCCCAAATCCTCCCTTTGACT...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS TCA 90 bp ATATTGGCAAAGAGCTTAAAAATTAAACAAAGGAATTCATGGCGTTaGCAGGAGAAGGTGCCTCTGAGCTTTCGTTTCCTTCAGCCGGCT +
Preference number: 5 (lower is better)
Translates to: ILAKSLKIKQRNSWR*QEKVPLSFRFLQPA
Trigger: AGCCGGCTGAAGGAAACGAAAGCTCAGAGGCACCTTCTCCTGTCAACGCCATGAATTCCTTTGTTTAATTTTTAAGCTCTTTGCCAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000522550.2
CDS GCA 90 bp ACTCTGCCCGCAGATAAGCGCTTCTTTTTCGGCATTATTTTAAGCTaGATTAGCTTAACTCCTGCTGAGACTCACACACTGAATTTCCTT +
Preference number: 5 (lower is better)
Translates to: TLPADKRFFFGIILS*ISLTPAETHTLNFL
Trigger: AAGGAAATTCAGTGTGTGAGTCTCAGCAGGAGTTAAGCTAATGCAGCTTAAAATAATGCCGAAAAAGAAGCGCTTATCTGCGGGCAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000417701.5
ENST00000418239.1
ENST00000419936.5
ENST00000442580.5
ENST00000456431.5
ENST00000613830.4
CDS GCA 90 bp TCCAGAAACTTCAGTTTGGTGGTGCCACAGCCCTGGCTTGTGCATTaGATCTTCATATTCGATGATGAATTTTGTAATGGGGCTATTGTT +
Preference number: 5 (lower is better)
Translates to: SRNFSLVVPQPWLVH*IFIFDDEFCNGAIV
Trigger: AACAATAGCCCCATTACAAAATTCATCATCGAATATGAAGATGCAATGCACAAGCCAGGGCTGTGGCACCACCAAACTGAAGTTTCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000613830.4
CDS GCA 90 bp TCCAGAAACTTCAGTTTGGTGGTGCCACAGCCCTGGCTTGTGCATTaGATCTTCATATTCATGATGAATTCTTGTAATGGGGCTATTGTT +
Preference number: 5 (lower is better)
Translates to: SRNFSLVVPQPWLVH*IFIFMMNSCNGAIV
Trigger: AACAATAGCCCCATTACAAGAATTCATCATGAATATGAAGATGCAATGCACAAGCCAGGGCTGTGGCACCACCAAACTGAAGTTTCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379022.8
CDS CCA 90 bp TGTGGTCTGTGTTCCAGAAACTTCAGTTTGGTGGTGCCACAGCCCTaGCTTGTGCATTGCATCTTCATATTCGATGATGAATTTTGTAAT +
Preference number: 5 (lower is better)
Translates to: CGLCSRNFSLVVPQP*LVHCIFIFDDEFCN
Trigger: ATTACAAAATTCATCATCGAATATGAAGATGCAATGCACAAGCCAGGGCTGTGGCACCACCAAACTGAAGTTTCTGGAACACAGACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000613830.4
CDS CCA 90 bp TGTGGTCTGTGTTCCAGAAACTTCAGTTTGGTGGTGCCACAGCCCTaGCTTGTGCATTGCATCTTCATATTCATGATGAATTCTTGTAAT +
Preference number: 5 (lower is better)
Translates to: CGLCSRNFSLVVPQP*LVHCIFIFMMNSCN
Trigger: ATTACAAGAATTCATCATGAATATGAAGATGCAATGCACAAGCCAGGGCTGTGGCACCACCAAACTGAAGTTTCTGGAACACAGACCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379022.8
CDS-3UTR CAA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACATCTTTTGGAGACTGTaGGGTGATGGTTGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHIFWRL*GDGWRL
Trigger: CAGCCTCCAACCATCACCCAACAGTCTCCAAAAGAT...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACGGGGGCGGTTTCCCTTaGGCTTCACACTGGATTACA +
Preference number: 5 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYGGGFP*ASHWIT
Trigger: TGTAATCCAGTGTGAAGCCAAAGGGAAACCGCCCCC...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCCTCCGCGTTCGTTCCTaGCTGTACACTGATAGACTC +
Preference number: 5 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTLRVRS*LYTDRL
Trigger: GAGTCTATCAGTGTACAGCAAGGAACGAACGCGGAG...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACACTCCGCGTTCGTTCCTaGCTGTACACTGATAGACTC +
Preference number: 5 (lower is better)
Translates to: CGAFFMHHIELYPAEEITLRVRS*LYTDRL
Trigger: GAGTCTATCAGTGTACAGCAAGGAACGAACGCGGAG...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp ACATTAGTACAAACCTGTGACAGGCACCCATTTAGTTATTCTCTTCCTTTTTCTCTCCGCGTTCGTTCCTaGCTGTACACTGATAGACTC +
Preference number: 5 (lower is better)
Translates to: TLVQTCDRHPFSYSLPFSLRVRS*LYTDRL
Trigger: GAGTCTATCAGTGTACAGCAAGGAACGAACGCGGAG...AGAAAAAGGAAGAGAATAACTAAATGGGTGCCTGTCACAGGTTTGTACTAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CAA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATGGTTCAAGTTTTTCTTaGGTCCACAATGGTGATCTG +
Preference number: 5 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDGSSFS*VHNGDL
Trigger: CAGATCACCATTGTGGACCAAAGAAAAACTTGAACC...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAGTGGTGGTAATCCAATaGGGGGTCTGCAGGGAAGTA +
Preference number: 5 (lower is better)
Translates to: CGAFFMHHIELYPAEEITVVVIQ*GVCREV
Trigger: TACTTCCCTGCAGACCCCCAATTGGATTACCACCAC...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCGTGGTGGTAATCCAATaGGGGGTCTGCAGGGAAGTA +
Preference number: 5 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTVVVIQ*GVCREV
Trigger: TACTTCCCTGCAGACCCCCAATTGGATTACCACCAC...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp ACATTAGTACAAACCTGTGACAGGCACCCATTTAGTTATTCTCTTCCTTTTTCTGTGGTGGTAATCCAATaGGGGGTCTGCAGGGAAGTA +
Preference number: 5 (lower is better)
Translates to: TLVQTCDRHPFSYSLPFSVVVIQ*GVCREV
Trigger: TACTTCCCTGCAGACCCCCAATTGGATTACCACCAC...AGAAAAAGGAAGAGAATAACTAAATGGGTGCCTGTCACAGGTTTGTACTAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CAA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATCTTCACAGAAATAGGTaGCTTCTGCTGTATGGTTTG +
Preference number: 5 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDLHRNR*LLLYGL
Trigger: CAAACCATACAGCAGAAGCAACCTATTTCTGTGAAG...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TCAACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGGGACAGCACAAGATTTaGAGGGGCTGTGATCCAGTA +
Preference number: 5 (lower is better)
Translates to: STCIKLTFHRARTIQGFEGQHKI*RGCDPV
Trigger: TACTGGATCACAGCCCCTCAAAATCTTGTGCTGTCC...CTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CAA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCCACCATGCTCCCTCTTaGCACAACTGCATATTCGGG +
Preference number: 5 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTHHAPS*HNCIFG
Trigger: CCCGAATATGCAGTTGTGCAAAGAGGGAGCATGGTG...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACACACCATGCTCCCTCTTaGCACAACTGCATATTCGGG +
Preference number: 5 (lower is better)
Translates to: CGAFFMHHIELYPAEEITHHAPS*HNCIFG
Trigger: CCCGAATATGCAGTTGTGCAAAGAGGGAGCATGGTG...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp ACCATCCTCTCAAAACACATAATGACTTTGCCTTTAGATGGACTCAAACCTAATCACCATGCTCCCTCTTaGCACAACTGCATATTCGGG +
Preference number: 5 (lower is better)
Translates to: TILSKHIMTLPLDGLKPNHHAPS*HNCIFG
Trigger: CCCGAATATGCAGTTGTGCAAAGAGGGAGCATGGTG...ATTAGGTTTGAGTCCATCTAAAGGCAAAGTCATTATGTGTTTTGAGAGGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CAA 90 bp ACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGTTTGTAATGGGGCTATTGTaGTCATCGCCTGGGGTCCAT +
Preference number: 5 (lower is better)
Translates to: TCIKLTFHRARTIQGFEFVMGLL*SSPGVH
Trigger: ATGGACCCCAGGCGATGACAACAATAGCCCCATTAC...AAACTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CAA 90 bp TCAACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGTGCCACAGCCCTGGCTaGTGCATTGCATCTTCATAT +
Preference number: 5 (lower is better)
Translates to: STCIKLTFHRARTIQGFECHSPG*CIASSY
Trigger: ATATGAAGATGCAATGCACAAGCCAGGGCTGTGGCA...CTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CAA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGTCCAGAAACTTCAGTTaGGTGGTGCCACAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: TITWTFTLNWEHKLQKRESRNFS*VVPQPW
Trigger: CCAGGGCTGTGGCACCACCAAACTGAAGTTTCTGGA...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAATCTTTTGGAGACTGTaGGGTGATGGTTGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTIFWRL*GDGWRL
Trigger: CAGCCTCCAACCATCACCCAACAGTCTCCAAAAGAT...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp ACATTAGTACAAACCTGTGACAGGCACCCATTTAGTTATTCTCTTCCTTTTTCTATCTTTTGGAGACTGTaGGGTGATGGTTGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: TLVQTCDRHPFSYSLPFSIFWRL*GDGWRL
Trigger: CAGCCTCCAACCATCACCCAACAGTCTCCAAAAGAT...AGAAAAAGGAAGAGAATAACTAAATGGGTGCCTGTCACAGGTTTGTACTAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CAA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGCTCCGCGTTCGTTCCTaGCTGTACACTGATAGACTC +
Preference number: 5 (lower is better)
Translates to: TITWTFTLNWEHKLQKRELRVRS*LYTDRL
Trigger: GAGTCTATCAGTGTACAGCAAGGAACGAACGCGGAG...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACGTGGTGGTAATCCAATaGGGGGTCTGCAGGGAAGTA +
Preference number: 5 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYVVVIQ*GVCREV
Trigger: TACTTCCCTGCAGACCCCCAATTGGATTACCACCAC...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTCTTCACAGAAATAGGTaGCTTCTGCTGTATGGTTTG +
Preference number: 5 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPLHRNR*LLLYGL
Trigger: CAAACCATACAGCAGAAGCAACCTATTTCTGTGAAG...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATATTCCTCTTTGTTACTaGCATTGCCTTCTGGAGTTA +
Preference number: 5 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDIPLCY*HCLLEL
Trigger: TAACTCCAGAAGGCAATGCAAGTAACAAAGAGGAAT...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp ACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGTTTATTCTGGGTTTGGGGTaGCCATTAGCTCTGCAGATC +
Preference number: 5 (lower is better)
Translates to: TCIKLTFHRARTIQGFEFILGLG*PLALQI
Trigger: GATCTGCAGAGCTAATGGCAACCCCAAACCCAGAAT...AAACTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CAA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACACAGCTAATTCTGGGTTaGGGGTTGCCATTAGCTCTG +
Preference number: 5 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTQLILG*GLPLAL
Trigger: CAGAGCTAATGGCAACCCCAAACCCAGAATTAGCTG...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp ACATTAGTACAAACCTGTGACAGGCACCCATTTAGTTATTCTCTTCCTTTTTCTCAGCTAATTCTGGGTTaGGGGTTGCCATTAGCTCTG +
Preference number: 5 (lower is better)
Translates to: TLVQTCDRHPFSYSLPFSQLILG*GLPLAL
Trigger: CAGAGCTAATGGCAACCCCAAACCCAGAATTAGCTG...AGAAAAAGGAAGAGAATAACTAAATGGGTGCCTGTCACAGGTTTGTACTAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CAA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCCAGGGGCAATTTCTATaGGGACTCCATTTGTTAACC +
Preference number: 5 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTQGQFL*GLHLLT
Trigger: GGTTAACAAATGGAGTCCCAATAGAAATTGCCCCTG...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACCACCATGCTCCCTCTTaGCACAACTGCATATTCGGG +
Preference number: 5 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDHHAPS*HNCIFG
Trigger: CCCGAATATGCAGTTGTGCAAAGAGGGAGCATGGTG...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACGTAATGGGGCTATTGTaGTCATCGCCTGGGGTCCAT +
Preference number: 5 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDVMGLL*SSPGVH
Trigger: ATGGACCCCAGGCGATGACAACAATAGCCCCATTAC...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGGTAATGGGGCTATTGTaGTCATCGCCTGGGGTCCAT +
Preference number: 5 (lower is better)
Translates to: TITWTFTLNWEHKLQKREVMGLL*SSPGVH
Trigger: ATGGACCCCAGGCGATGACAACAATAGCCCCATTAC...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACATTTGTAATGGGGCTATaGTTGTCATCGCCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTFVMGL*LSSPGV
Trigger: GACCCCAGGCGATGACAACAATAGCCCCATTACAAA...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp ACATTAGTACAAACCTGTGACAGGCACCCATTTAGTTATTCTCTTCCTTTTTCTTTTGTAATGGGGCTATaGTTGTCATCGCCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: TLVQTCDRHPFSYSLPFSFVMGL*LSSPGV
Trigger: GACCCCAGGCGATGACAACAATAGCCCCATTACAAA...AGAAAAAGGAAGAGAATAACTAAATGGGTGCCTGTCACAGGTTTGTACTAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CAA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCGTCCACCGTGTCTTGTaGGCAGGAATTTTCAAATCT +
Preference number: 5 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTVHRVL*AGIFKS
Trigger: AGATTTGAAAATTCCTGCCAACAAGACACGGTGGAC...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATGGATATTTACCACCCTaGTTTCTTCTGATGAAGCAA +
Preference number: 5 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDGYLPP*FLLMKQ
Trigger: TTGCTTCATCAGAAGAAACAAGGGTGGTAAATATCC...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATTTTTCATGCATCATATaGAACTGTATCCTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDFSCII*NCILQR
Trigger: CCTCTGCAGGATACAGTTCAATATGATGCATGAAAA...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTACTGTTGGCATGCTGTaGTATGCTTTTAGTGTTGGA +
Preference number: 5 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPTVGML*YAFSVG
Trigger: TCCAACACTAAAAGCATACAACAGCATGCCAACAGT...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATTGGCCTTTTAAGCACTaGCCTGATTTCTTAGATTCT +
Preference number: 5 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDWPFKH*PDFLDS
Trigger: AGAATCTAAGAAATCAGGCAAGTGCTTAAAAGGCCA...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACTGCAGATGTAATCCCTaGGACCGTTGGCCTTTTAAG +
Preference number: 5 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHCRCNP*DRWPFK
Trigger: CTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCA...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACACCTGGGATTTACTGCTaGAACTTTGCCTGCACCTAC +
Preference number: 5 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTPGIYC*NFACTY
Trigger: GTAGGTGCAGGCAAAGTTCAAGCAGTAAATCCCAGG...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379028.8
CDS-3UTR CAA 90 bp ACATTAGTACAAACCTGTGACAGGCACCCATTTAGTTATTCTCTTCCTTTTTCTAAAAAGAGGCAGTACTaGTCTGAAGGCCTGGCCCAT +
Preference number: 5 (lower is better)
Translates to: TLVQTCDRHPFSYSLPFSKKRQY*SEGLAH
Trigger: ATGGGCCAGGCCTTCAGACAAGTACTGCCTCTTTTT...AGAAAAAGGAAGAGAATAACTAAATGGGTGCCTGTCACAGGTTTGTACTAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS CCA 90 bp ATGATTAAATCTAGCATAACAGATATAGTCTTCGCGGGTGTCCTCTaGGAGGACATTGGAAAAATAAAGGTCCCCATTCAAACCTTGAGA +
Preference number: 5 (lower is better)
Translates to: MIKSSITDIVFAGVL*EDIGKIKVPIQTLR
Trigger: TCTCAAGGTTTGAATGGGGACCTTTATTTTTCCAATGTCCTCCCAGAGGACACCCGCGAAGACTATATCTGTTATGCTAGATTTAATCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000417701.5
ENST00000613830.4
CDS-3UTR CAA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACAACGTCTTCTTAGCATaGCTCTTCAGAAGGTCCACT +
Preference number: 5 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHNVFLA*LFRRST
Trigger: AGTGGACCTTCTGAAGAGCAATGCTAAGAAGACGTT...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTAGAAACTCTCTCACTTaGTGGAAGTCTTTGAAAGGA +
Preference number: 5 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPRNSLT*WKSLKG
Trigger: TCCTTTCAAAGACTTCCACAAAGTGAGAGAGTTTCT...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATCTTCTGCTGTATGGTTaGAGTATGATTAAATCTAGC +
Preference number: 5 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDLLLYG*SMIKSS
Trigger: GCTAGATTTAATCATACTCAAACCATACAGCAGAAG...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp ACCGTGCTCGCACGATTCAAGGTTTTGAGTTTCAGTAACTCATTCCTGATTCAGCTTCTGCTGTATGGTTaGAGTATGATTAAATCTAGC +
Preference number: 5 (lower is better)
Translates to: TVLARFKVLSFSNSFLIQLLLYG*SMIKSS
Trigger: GCTAGATTTAATCATACTCAAACCATACAGCAGAAG...CTGAATCAGGAATGAGTTACTGAAACTCAAAACCTTGAATCGTGCGAGCACGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CAA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTATTCCTCTTTGTTACTaGCATTGCCTTCTGGAGTTA +
Preference number: 5 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPIPLCY*HCLLEL
Trigger: TAACTCCAGAAGGCAATGCAAGTAACAAAGAGGAAT...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACGGACAGCACAAGATTTaGAGGGGCTGTGATCCAGTA +
Preference number: 5 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYGQHKI*RGCDPV
Trigger: TACTGGATCACAGCCCCTCAAAATCTTGTGCTGTCC...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACATTCTGGGTTTGGGGTaGCCATTAGCTCTGCAGATC +
Preference number: 5 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDILGLG*PLALQI
Trigger: GATCTGCAGAGCTAATGGCAACCCCAAACCCAGAAT...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACATCCTGTACTGTCCTTTaGGGCCACAGGAATTTCCAA +
Preference number: 5 (lower is better)
Translates to: CGAFFMHHIELYPAEEITSCTVL*GHRNFQ
Trigger: TTGGAAATTCCTGTGGCCCAAAAGGACAGTACAGGA...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp ACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGTTTTCCTGTACTGTCCTTTaGGGCCACAGGAATTTCCAA +
Preference number: 5 (lower is better)
Translates to: TCIKLTFHRARTIQGFEFSCTVL*GHRNFQ
Trigger: TTGGAAATTCCTGTGGCCCAAAAGGACAGTACAGGA...AAACTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CAA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATTCCCTAATTTATTCCTaGCAACACACGTATAAGTTC +
Preference number: 5 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDSLIYS*QHTYKF
Trigger: GAACTTATACGTGTGTTGCAAGGAATAAATTAGGGA...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp ACCGTGCTCGCACGATTCAAGGTTTTGAGTTTCAGTAACTCATTCCTGATTCAGTCCCTAATTTATTCCTaGCAACACACGTATAAGTTC +
Preference number: 5 (lower is better)
Translates to: TVLARFKVLSFSNSFLIQSLIYS*QHTYKF
Trigger: GAACTTATACGTGTGTTGCAAGGAATAAATTAGGGA...CTGAATCAGGAATGAGTTACTGAAACTCAAAACCTTGAATCGTGCGAGCACGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CAA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACTTTGTAATGGGGCTATaGTTGTCATCGCCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDFVMGL*LSSPGV
Trigger: GACCCCAGGCGATGACAACAATAGCCCCATTACAAA...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACTGCCACAGCCCTGGCTaGTGCATTGCATCTTCATAT +
Preference number: 5 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDCHSPG*CIASSY
Trigger: ATATGAAGATGCAATGCACAAGCCAGGGCTGTGGCA...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGTGCCACAGCCCTGGCTaGTGCATTGCATCTTCATAT +
Preference number: 5 (lower is better)
Translates to: TITWTFTLNWEHKLQKRECHSPG*CIASSY
Trigger: ATATGAAGATGCAATGCACAAGCCAGGGCTGTGGCA...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAGGTATGGAACAAAGGTaGGCGTGCCTGAGACAATAT +
Preference number: 5 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTGMEQR*ACLRQY
Trigger: ATATTGTCTCAGGCACGCCAACCTTTGTTCCATACC...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAGGTATGGAACAAAGGTaGGCGTGCCTGAGACAATAT +
Preference number: 5 (lower is better)
Translates to: CGAFFMHHIELYPAEEITGMEQR*ACLRQY
Trigger: ATATTGTCTCAGGCACGCCAACCTTTGTTCCATACC...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACGTCCACCGTGTCTTGTaGGCAGGAATTTTCAAATCT +
Preference number: 5 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHVHRVL*AGIFKS
Trigger: AGATTTGAAAATTCCTGCCAACAAGACACGGTGGAC...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCAAAGTCCACCGTGTCTaGTTGGCAGGAATTTTCAAA +
Preference number: 5 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTKVHRV*LAGIFK
Trigger: TTTGAAAATTCCTGCCAACAAGACACGGTGGACTTT...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTTTTCTTACCACTGTATaGTCCAATAAAGGAGCCATC +
Preference number: 5 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPFLTTV*SNKGAI
Trigger: GATGGCTCCTTTATTGGACAATACAGTGGTAAGAAA...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACAAGGAATTCATGGCGTaGACAGGAGAAGGTGCCTCT +
Preference number: 5 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDKEFMA*TGEGAS
Trigger: AGAGGCACCTTCTCCTGTCAACGCCATGAATTCCTT...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTTTTTCATGCATCATATaGAACTGTATCCTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPFSCII*NCILQR
Trigger: CCTCTGCAGGATACAGTTCAATATGATGCATGAAAA...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGATGCACTGCAATACACATaGTTTATGCCTAAAAACAAC +
Preference number: 5 (lower is better)
Translates to: LNCRCNPLDRWPFKHLPDALQYT*FMPKNN
Trigger: GTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGC...ATCAGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTTGGCCTTTTAAGCACTaGCCTGATTTCTTAGATTCT +
Preference number: 5 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPWPFKH*PDFLDS
Trigger: AGAATCTAAGAAATCAGGCAAGTGCTTAAAAGGCCA...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACAGTCAAAGGGAGGATTaGGGACATCGTAAACGGGAG +
Preference number: 5 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDSQRED*GHRKRE
Trigger: CTCCCGTTTACGATGTCCCAAATCCTCCCTTTGACT...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAGCTGCAGCAGTAAGATaGCTGATCCTGGGATTTACT +
Preference number: 5 (lower is better)
Translates to: CGAFFMHHIELYPAEEITAAAVR*LILGFT
Trigger: AGTAAATCCCAGGATCAGCAATCTTACTGCTGCAGC...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379028.8
CDS GCA 90 bp CCAGTGAAAGCACATTTCCTCTTAATTCCTCTTTGTTACTTGCATTaGCTTCTGGAGTTAAAAATGTTGGTGGCCTCTCTCTACTTGATT +
Preference number: 5 (lower is better)
Translates to: PVKAHFLLIPLCYLH*LLELKMLVASLYLI
Trigger: AATCAAGTAGAGAGAGGCCACCAACATTTTTAACTCCAGAAGGCAATGCAAGTAACAAAGAGGAATTAAGAGGAAATGTGCTTTCACTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000417701.5
ENST00000613830.4
CDS-3UTR CAA 90 bp ACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGTTTAACGTCTTCTTAGCATaGCTCTTCAGAAGGTCCACT +
Preference number: 5 (lower is better)
Translates to: TCIKLTFHRARTIQGFEFNVFLA*LFRRST
Trigger: AGTGGACCTTCTGAAGAGCAATGCTAAGAAGACGTT...AAACTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CAA 90 bp TCAACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGGGTTCAAGTTTTTCTTaGGTCCACAATGGTGATCTG +
Preference number: 5 (lower is better)
Translates to: STCIKLTFHRARTIQGFEGSSFS*VHNGDL
Trigger: CAGATCACCATTGTGGACCAAAGAAAAACTTGAACC...CTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CAA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCGTCCCCATTCAAACCTaGAGAAACTCTCTCACTTTG +
Preference number: 5 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTVPIQT*RNSLTL
Trigger: CAAAGTGAGAGAGTTTCTCAAGGTTTGAATGGGGAC...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAGTCCCCATTCAAACCTaGAGAAACTCTCTCACTTTG +
Preference number: 5 (lower is better)
Translates to: CGAFFMHHIELYPAEEITVPIQT*RNSLTL
Trigger: CAAAGTGAGAGAGTTTCTCAAGGTTTGAATGGGGAC...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp ACATTAGTACAAACCTGTGACAGGCACCCATTTAGTTATTCTCTTCCTTTTTCTGTCCCCATTCAAACCTaGAGAAACTCTCTCACTTTG +
Preference number: 5 (lower is better)
Translates to: TLVQTCDRHPFSYSLPFSVPIQT*RNSLTL
Trigger: CAAAGTGAGAGAGTTTCTCAAGGTTTGAATGGGGAC...AGAAAAAGGAAGAGAATAACTAAATGGGTGCCTGTCACAGGTTTGTACTAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CAA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCATTCCTCTTTGTTACTaGCATTGCCTTCTGGAGTTA +
Preference number: 5 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTIPLCY*HCLLEL
Trigger: TAACTCCAGAAGGCAATGCAAGTAACAAAGAGGAAT...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACACAGGGGCAATTTCTATaGGGACTCCATTTGTTAACC +
Preference number: 5 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTQGQFL*GLHLLT
Trigger: GGTTAACAAATGGAGTCCCAATAGAAATTGCCCCTG...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCCAGGGGCAATTTCTATaGGGACTCCATTTGTTAACC +
Preference number: 5 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTQGQFL*GLHLLT
Trigger: GGTTAACAAATGGAGTCCCAATAGAAATTGCCCCTG...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp ACATTAGTACAAACCTGTGACAGGCACCCATTTAGTTATTCTCTTCCTTTTTCTCAGGGGCAATTTCTATaGGGACTCCATTTGTTAACC +
Preference number: 5 (lower is better)
Translates to: TLVQTCDRHPFSYSLPFSQGQFL*GLHLLT
Trigger: GGTTAACAAATGGAGTCCCAATAGAAATTGCCCCTG...AGAAAAAGGAAGAGAATAACTAAATGGGTGCCTGTCACAGGTTTGTACTAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CAA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACTCCTGTACTGTCCTTTaGGGCCACAGGAATTTCCAA +
Preference number: 5 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDSCTVL*GHRNFQ
Trigger: TTGGAAATTCCTGTGGCCCAAAAGGACAGTACAGGA...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTTCCCTAATTTATTCCTaGCAACACACGTATAAGTTC +
Preference number: 5 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPSLIYS*QHTYKF
Trigger: GAACTTATACGTGTGTTGCAAGGAATAAATTAGGGA...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCGTCCACCGTGTCTTGTaGGCAGGAATTTTCAAATCT +
Preference number: 5 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTVHRVL*AGIFKS
Trigger: AGATTTGAAAATTCCTGCCAACAAGACACGGTGGAC...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAGTCCACCGTGTCTTGTaGGCAGGAATTTTCAAATCT +
Preference number: 5 (lower is better)
Translates to: CGAFFMHHIELYPAEEITVHRVL*AGIFKS
Trigger: AGATTTGAAAATTCCTGCCAACAAGACACGGTGGAC...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCTTTCTTACCACTGTATaGTCCAATAAAGGAGCCATC +
Preference number: 5 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTFLTTV*SNKGAI
Trigger: GATGGCTCCTTTATTGGACAATACAGTGGTAAGAAA...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TTTTTAAACTGCAGATGTAATCCCTTGGACCGTTGGCCTTTTAAGCACTTGCCTGCACTGCAATACACATaGTTTATGCCTAAAAACAAC +
Preference number: 5 (lower is better)
Translates to: FLNCRCNPLDRWPFKHLPALQYT*FMPKNN
Trigger: GTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGC...AGGCAAGTGCTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCAGTTTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCTGGCCTTTTAAGCACTaGCCTGATTTCTTAGATTCT +
Preference number: 5 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTWPFKH*PDFLDS
Trigger: AGAATCTAAGAAATCAGGCAAGTGCTTAAAAGGCCA...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGTGCAGATGTAATCCCTaGGACCGTTGGCCTTTTAAG +
Preference number: 5 (lower is better)
Translates to: TITWTFTLNWEHKLQKRECRCNP*DRWPFK
Trigger: CTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCA...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACTGCAGATGTAATCCCTaGGACCGTTGGCCTTTTAAG +
Preference number: 5 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDCRCNP*DRWPFK
Trigger: CTTAAAAGGCCAACGGTCCAAGGGATTACATCTGCA...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCAGTCTTCAAGAAGTTTaGGATCAAGAGGTACTTCCA +
Preference number: 5 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTSLQEV*DQEVLP
Trigger: TGGAAGTACCTCTTGATCCAAAACTTCTTGAAGACT...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGGCACCAACTCGAACTTaGTATGCTGTTCCTGGCATT +
Preference number: 5 (lower is better)
Translates to: TITWTFTLNWEHKLQKREAPTRT*YAVPGI
Trigger: AATGCCAGGAACAGCATACAAAGTTCGAGTTGGTGC...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379028.8
CDS GCA 90 bp CCCTGTCATTCTTCCCATTATCCATGTAAAAAGCAGACGAAATATTaGCAAGTACCAGTCATCACATGCCATTATGTTAACAGCATAAAC +
Preference number: 5 (lower is better)
Translates to: PCHSSHYPCKKQTKY*QVPVITCHYVNSIN
Trigger: GTTTATGCTGTTAACATAATGGCATGTGATGACTGGTACTTGGCAATATTTCGTCTGCTTTTTACATGGATAATGGGAAGAATGACAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489800.1
CDS-3UTR CAA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACAACGTCTTCTTAGCATaGCTCTTCAGAAGGTCCACT +
Preference number: 5 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDNVFLA*LFRRST
Trigger: AGTGGACCTTCTGAAGAGCAATGCTAAGAAGACGTT...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAACGTCTTCTTAGCATaGCTCTTCAGAAGGTCCACT +
Preference number: 5 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYNVFLA*LFRRST
Trigger: AGTGGACCTTCTGAAGAGCAATGCTAAGAAGACGTT...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TCAACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGAGAAACTCTCTCACTTaGTGGAAGTCTTTGAAAGGA +
Preference number: 5 (lower is better)
Translates to: STCIKLTFHRARTIQGFERNSLT*WKSLKG
Trigger: TCCTTTCAAAGACTTCCACAAAGTGAGAGAGTTTCT...CTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CAA 90 bp ACCATCCTCTCAAAACACATAATGACTTTGCCTTTAGATGGACTCAAACCTAATCTTCACAGAAATAGGTaGCTTCTGCTGTATGGTTTG +
Preference number: 5 (lower is better)
Translates to: TILSKHIMTLPLDGLKPNLHRNR*LLLYGL
Trigger: CAAACCATACAGCAGAAGCAACCTATTTCTGTGAAG...ATTAGGTTTGAGTCCATCTAAAGGCAAAGTCATTATGTGTTTTGAGAGGATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CAA 90 bp TCAACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGATTCCTCTTTGTTACTaGCATTGCCTTCTGGAGTTA +
Preference number: 5 (lower is better)
Translates to: STCIKLTFHRARTIQGFEIPLCY*HCLLEL
Trigger: TAACTCCAGAAGGCAATGCAAGTAACAAAGAGGAAT...CTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CAA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACCAGGGGCAATTTCTATaGGGACTCCATTTGTTAACC +
Preference number: 5 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDQGQFL*GLHLLT
Trigger: GGTTAACAAATGGAGTCCCAATAGAAATTGCCCCTG...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACTATATTTGGATACATTaGCCACAACCACAGATGTCC +
Preference number: 5 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHYIWIH*PQPQMS
Trigger: GGACATCTGTGGTTGTGGCAAATGTATCCAAATATA...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAAAAGTCCACCGTGTCTaGTTGGCAGGAATTTTCAAA +
Preference number: 5 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTKVHRV*LAGIFK
Trigger: TTTGAAAATTCCTGCCAACAAGACACGGTGGACTTT...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCAAAGTCCACCGTGTCTaGTTGGCAGGAATTTTCAAA +
Preference number: 5 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTKVHRV*LAGIFK
Trigger: TTTGAAAATTCCTGCCAACAAGACACGGTGGACTTT...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACTTTTCATGCATCATATaGAACTGTATCCTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHFSCII*NCILQR
Trigger: CCTCTGCAGGATACAGTTCAATATGATGCATGAAAA...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACTGTTGGCATGCTGTaGTATGCTTTTAGTGTTGGA +
Preference number: 5 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTTVGML*YAFSVG
Trigger: TCCAACACTAAAAGCATACAACAGCATGCCAACAGT...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAACTGTTGGCATGCTGTaGTATGCTTTTAGTGTTGGA +
Preference number: 5 (lower is better)
Translates to: CGAFFMHHIELYPAEEITTVGML*YAFSVG
Trigger: TCCAACACTAAAAGCATACAACAGCATGCCAACAGT...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp GGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACAACCCAATTTGCATACACGTaGTTTAATGCTGCAGAGTTT +
Preference number: 5 (lower is better)
Translates to: GTNAEMHCNTHCLCLKTTQFAYT*FNAAEF
Trigger: AAACTCTGCAGCATTAAACAACGTGTATGCAAATTG...GGTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACAGTCTTCAAGAAGTTTaGGATCAAGAGGTACTTCCA +
Preference number: 5 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHSLQEV*DQEVLP
Trigger: TGGAAGTACCTCTTGATCCAAAACTTCTTGAAGACT...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TCAACATGTATTAAATTGACATTTCACCGTGCTCGCACGATTCAAGGTTTTGAGTCAACATGTATTAAATaGACATTTCACCGTGCTCGC +
Preference number: 5 (lower is better)
Translates to: STCIKLTFHRARTIQGFESTCIK*TFHRAR
Trigger: GCGAGCACGGTGAAATGTCAATTTAATACATGTTGA...CTCAAAACCTTGAATCGTGCGAGCACGGTGAAATGTCAATTTAATACATGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613830.4
CDS-3UTR CAA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGGGTTCAAGTTTTTCTTaGGTCCACAATGGTGATCTG +
Preference number: 5 (lower is better)
Translates to: TITWTFTLNWEHKLQKREGSSFS*VHNGDL
Trigger: CAGATCACCATTGTGGACCAAAGAAAAACTTGAACC...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAAGAAACTCTCTCACTTaGTGGAAGTCTTTGAAAGGA +
Preference number: 5 (lower is better)
Translates to: CGAFFMHHIELYPAEEITRNSLT*WKSLKG
Trigger: TCCTTTCAAAGACTTCCACAAAGTGAGAGAGTTTCT...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGCTTCACAGAAATAGGTaGCTTCTGCTGTATGGTTTG +
Preference number: 5 (lower is better)
Translates to: TITWTFTLNWEHKLQKRELHRNR*LLLYGL
Trigger: CAAACCATACAGCAGAAGCAACCTATTTCTGTGAAG...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACCTTCACAGAAATAGGTaGCTTCTGCTGTATGGTTTG +
Preference number: 5 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYLHRNR*LLLYGL
Trigger: CAAACCATACAGCAGAAGCAACCTATTTCTGTGAAG...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCTATATTTGGATACATTaGCCACAACCACAGATGTCC +
Preference number: 5 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTYIWIH*PQPQMS
Trigger: GGACATCTGTGGTTGTGGCAAATGTATCCAAATATA...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACATATATTTGGATACATTaGCCACAACCACAGATGTCC +
Preference number: 5 (lower is better)
Translates to: CGAFFMHHIELYPAEEITYIWIH*PQPQMS
Trigger: GGACATCTGTGGTTGTGGCAAATGTATCCAAATATA...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGAAAGTCCACCGTGTCTaGTTGGCAGGAATTTTCAAA +
Preference number: 5 (lower is better)
Translates to: TITWTFTLNWEHKLQKREKVHRV*LAGIFK
Trigger: TTTGAAAATTCCTGCCAACAAGACACGGTGGACTTT...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACAGGATATTTACCACCCTaGTTTCTTCTGATGAAGCAA +
Preference number: 5 (lower is better)
Translates to: CGAFFMHHIELYPAEEITGYLPP*FLLMKQ
Trigger: TTGCTTCATCAGAAGAAACAAGGGTGGTAAATATCC...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACATTTCTTACCACTGTATaGTCCAATAAAGGAGCCATC +
Preference number: 5 (lower is better)
Translates to: CGAFFMHHIELYPAEEITFLTTV*SNKGAI
Trigger: GATGGCTCCTTTATTGGACAATACAGTGGTAAGAAA...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACGCACTGCAATACACATaGTTTATGCCTAAAAACAAC +
Preference number: 5 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHALQYT*FMPKNN
Trigger: GTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGC...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp AAATCCAGTCACATTTGCCTGTACCATTACATACACCATTACTTGGACATTCACTACATACACCATTACTaGGACATTCACACTCAATTG +
Preference number: 5 (lower is better)
Translates to: KSSHICLYHYIHHYLDIHYIHHY*DIHTQL
Trigger: CAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTA...GTGAATGTCCAAGTAATGGTGTATGTAATGGTACAGGCAAATGTGACTGGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGTTTCTCCATTCTTCTTaGCTGCCTGCTACACCATAT +
Preference number: 5 (lower is better)
Translates to: TITWTFTLNWEHKLQKREFLHSS*LPATPY
Trigger: ATATGGTGTAGCAGGCAGCAAAGAAGAATGGAGAAA...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379028.8
CDS-3UTR CAA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACTTCATGCGGGAAACTTaGAAGAAGCTCTTAAGTTGT +
Preference number: 5 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYFMRET*KKLLSC
Trigger: ACAACTTAAGAGCTTCTTCAAAGTTTCCCGCATGAA...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACAGAAACTCTCTCACTTaGTGGAAGTCTTTGAAAGGA +
Preference number: 5 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDRNSLT*WKSLKG
Trigger: TCCTTTCAAAGACTTCCACAAAGTGAGAGAGTTTCT...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp CTGAGCATTCCTTCAACCATAGGTTGTTATAGATTTTCATATTTGGAGGTAACCCTTCTGCTGTATGGTTaGAGTATGATTAAATCTAGC +
Preference number: 5 (lower is better)
Translates to: LSIPSTIGCYRFSYLEVTLLLYG*SMIKSS
Trigger: GCTAGATTTAATCATACTCAAACCATACAGCAGAAG...GGTTACCTCCAAATATGAAAATCTATAACAACCTATGGTTGAAGGAATGCTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TGTGGAGCATTTTTCATGCATCATATTGAACTGTATCCTGCAGAGGAAATAACATCCCTAATTTATTCCTaGCAACACACGTATAAGTTC +
Preference number: 5 (lower is better)
Translates to: CGAFFMHHIELYPAEEITSLIYS*QHTYKF
Trigger: GAACTTATACGTGTGTTGCAAGGAATAAATTAGGGA...TGTTATTTCCTCTGCAGGATACAGTTCAATATGATGCATGAAAAATGCTCCACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGTATATTTGGATACATTaGCCACAACCACAGATGTCC +
Preference number: 5 (lower is better)
Translates to: TITWTFTLNWEHKLQKREYIWIH*PQPQMS
Trigger: GGACATCTGTGGTTGTGGCAAATGTATCCAAATATA...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACGGATATTTACCACCCTaGTTTCTTCTGATGAAGCAA +
Preference number: 5 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDGYLPP*FLLMKQ
Trigger: TTGCTTCATCAGAAGAAACAAGGGTGGTAAATATCC...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACTTTCTTACCACTGTATaGTCCAATAAAGGAGCCATC +
Preference number: 5 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDFLTTV*SNKGAI
Trigger: GATGGCTCCTTTATTGGACAATACAGTGGTAAGAAA...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TATGGCACAAATGCCGAAATGCACTGCAATACACATTGTTTATGCCTAAAAACACAATTTGCATACACGTaGTTTAATGCTGCAGAGTTT +
Preference number: 5 (lower is better)
Translates to: YGTNAEMHCNTHCLCLKTQFAYT*FNAAEF
Trigger: AAACTCTGCAGCATTAAACAACGTGTATGCAAATTG...TGTTTTTAGGCATAAACAATGTGTATTGCAGTGCATTTCGGCATTTGTGCCATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGAGTCTTCAAGAAGTTTaGGATCAAGAGGTACTTCCA +
Preference number: 5 (lower is better)
Translates to: TITWTFTLNWEHKLQKRESLQEV*DQEVLP
Trigger: TGGAAGTACCTCTTGATCCAAAACTTCTTGAAGACT...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp ACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACAAAAGAGAGAGCTTCTGCTGTATGGTTaGAGTATGATTAAATCTAGC +
Preference number: 5 (lower is better)
Translates to: TITWTFTLNWEHKLQKRELLLYG*SMIKSS
Trigger: GCTAGATTTAATCATACTCAAACCATACAGCAGAAG...CTCTCTCTTTTGTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACGCACTGCAATACACATaGTTTATGCCTAAAAACAAC +
Preference number: 5 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDALQYT*FMPKNN
Trigger: GTTGTTTTTAGGCATAAACAATGTGTATTGCAGTGC...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACCATCATGTGCTTCAGTaGGCAACAAAGATTTTCTTT +
Preference number: 5 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDHHVLQ*ATKIFF
Trigger: AAAGAAAATCTTTGTTGCCAACTGAAGCACATGATG...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp CCATTACATACACCATTACTTGGACATTCACACTCAATTGGGAACATAAATTACCATCATGTGCTTCAGTaGGCAACAAAGATTTTCTTT +
Preference number: 5 (lower is better)
Translates to: PLHTPLLGHSHSIGNINYHHVLQ*ATKIFF
Trigger: AAAGAAAATCTTTGTTGCCAACTGAAGCACATGATG...GTAATTTATGTTCCCAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTAATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS-3UTR CAA 90 bp TCATTTAGCAAGTATATACTGTACAAACTGTTCCTAACAGTCTCCCAAAAAGACTACATACACCATTACTaGGACATTCACACTCAATTG +
Preference number: 5 (lower is better)
Translates to: SFSKYILYKLFLTVSQKDYIHHY*DIHTQL
Trigger: CAATTGAGTGTGAATGTCCAAGTAATGGTGTATGTA...GTCTTTTTGGGAGACTGTTAGGAACAGTTTGTACAGTATATACTTGCTAAATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351718.8
ENST00000379028.8
ENST00000413765.6
CDS GCA 72 bp TCTCGCGCCGCGCCCTCCGCTCAGCTCTGGCGCGACTaGCCAGGACCCTGGACCGCCGGTGTCCTCCGTTCT +
Preference number: 6 (lower is better)
Translates to: SRAAPSAQLWRD*PGPWTAGVLRS
Trigger: AGAACGGAGGACACCGGCGGTCCAGGGTCCTGGGCAGTCGCGCCAGAGCTGAGCGGAGGGCGCGGCGCGAGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000613830.4
CDS CCA 72 bp AAGATTCGTTCTCGCGCCGCGCCCTCCGCTCAGCTCTaGCGCGACTGCCCAGGACCCTGGACCGCCGGTGTC +
Preference number: 6 (lower is better)
Translates to: KIRSRAAPSAQL*RDCPGPWTAGV
Trigger: GACACCGGCGGTCCAGGGTCCTGGGCAGTCGCGCCAGAGCTGAGCGGAGGGCGCGGCGCGAGAACGAATCTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000613830.4
CDS CCA 72 bp GCACAGCGCTGGCGGAGACGCTGTCCAGAGTGGTGTTaGCCACACACGTGTAGGTCCCGCTGTCATCGTCAC +
Preference number: 6 (lower is better)
Translates to: AQRWRRRCPEWC*PHTCRSRCHRH
Trigger: GTGACGATGACAGCGGGACCTACACGTGTGTGGCCAACACCACTCTGGACAGCGTCTCCGCCAGCGCTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000613830.4
CDS CCA 72 bp TGGGAGGTCTTCTCCAGAATGTCCCATGACTACAGCTaGCTCGGGGGCAAACCCCATGTCATTCAGGGCCTG +
Preference number: 6 (lower is better)
Translates to: WEVFSRMSHDYS*LGGKPHVIQGL
Trigger: CAGGCCCTGAATGACATGGGGTTTGCCCCCGAGCCAGCTGTAGTCATGGGACATTCTGGAGAAGACCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS TCA 72 bp GCTTGCCATCGCTGGGCCTGTCTCAAACACATCCTCTaGACTCACAAAACCAGAGTCCCCCACAGCACCAAC +
Preference number: 6 (lower is better)
Translates to: ACHRWACLKHIL*THKTRVPHSTN
Trigger: GTTGGTGCTGTGGGGGACTCTGGTTTTGTGAGTTCAGAGGATGTGTTTGAGACAGGCCCAGCGATGGCAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379022.8
ENST00000379028.8
CDS GCA 72 bp AGCAGGCCTGTTTGCAATGACCTGGTAGAGTGTGTTTaGAGGTGTGAGGATTCGTGGTGGCTCAGCCAGCAC +
Preference number: 6 (lower is better)
Translates to: SRPVCNDLVECV*RCEDSWWLSQH
Trigger: GTGCTGGCTGAGCCACCACGAATCCTCACACCTGCAAACACACTCTACCAGGTCATTGCAAACAGGCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000613830.4
CDS CAA 72 bp CAGCTGGGCTGTGGTCTGTGTTCCAGAAACTTCAGTTaGGTGGTGCCACAGCCCTGGCTTGTGCATTGCATC +
Preference number: 6 (lower is better)
Translates to: QLGCGLCSRNFS*VVPQPWLVHCI
Trigger: GATGCAATGCACAAGCCAGGGCTGTGGCACCACCAAACTGAAGTTTCTGGAACACAGACCACAGCCCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000613830.4
CDS TCA 72 bp CGGGGGCAAACCCCATGTCATTCAGGGCCTGAACTTTaGTCAGGTATGGAACAAAGGTTGGCGTGCCTGAGA +
Preference number: 6 (lower is better)
Translates to: RGQTPCHSGPEL*SGMEQRLACLR
Trigger: TCTCAGGCACGCCAACCTTTGTTCCATACCTGATCAAAGTTCAGGCCCTGAATGACATGGGGTTTGCCCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS CCA 72 bp GCCATTAGCTCTGCAGATCAAGGTCCCATCCTCTCCTaGGGACAGCACAAGATTTTGAGGGGCTGTGATCCA +
Preference number: 6 (lower is better)
Translates to: AISSADQGPILS*GQHKILRGCDP
Trigger: TGGATCACAGCCCCTCAAAATCTTGTGCTGTCCCCAGGAGAGGATGGGACCTTGATCTGCAGAGCTAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000417701.5
ENST00000489800.1
ENST00000613830.4
CDS CCA 72 bp AGCTGGGCTGTGGTCTGTGTTCCAGAAACTTCAGTTTaGTGGTGCCACAGCCCTGGCTTGTGCATTGCATCT +
Preference number: 6 (lower is better)
Translates to: SWAVVCVPETSV*WCHSPGLCIAS
Trigger: AGATGCAATGCACAAGCCAGGGCTGTGGCACCACCAAACTGAAGTTTCTGGAACACAGACCACAGCCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000613830.4
CDS CCA 72 bp CTGAGGCTTTCGTCAAATACTGCTCAGACGCCTCGCTaGGCAAGCTCTTCCCAATGCTGTTCACTGCCATCA +
Preference number: 6 (lower is better)
Translates to: LRLSSNTAQTPR*ASSSQCCSLPS
Trigger: TGATGGCAGTGAACAGCATTGGGAAGAGCTTGCCCAGCGAGGCGTCTGAGCAGTATTTGACGAAAGCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000613830.4
CDS CCA 72 bp TCCTTCTGGAGTATTAAAGACTCTGTCAGGGCTGGCTaGGCCCTCCCCTTTCCCATTGACCACTCGGACATT +
Preference number: 6 (lower is better)
Translates to: SFWSIKDSVRAG*ALPFPIDHSDI
Trigger: AATGTCCGAGTGGTCAATGGGAAAGGGGAGGGCCCAGCCAGCCCTGACAGAGTCTTTAATACTCCAGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS TCA 72 bp TGGCCCATGTGCAGTAAAATGTTAAAGTCCTGCTCCTaGCAGCCAATCCAAAGCTGCTCAGACCTCCCAGGC +
Preference number: 6 (lower is better)
Translates to: WPMCSKMLKSCS*QPIQSCSDLPG
Trigger: GCCTGGGAGGTCTGAGCAGCTTTGGATTGGCTGTCAGGAGCAGGACTTTAACATTTTACTGCACATGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456431.5
CDS GCA 72 bp TGTCCTCGGATGCTTTTCAGAGGTACTGGGTCCCAGTaGACCTCGGCTAAGGTACTGTTCACCACATTCACA +
Preference number: 6 (lower is better)
Translates to: CPRMLFRGTGSQ*TSAKVLFTTFT
Trigger: TGTGAATGTGGTGAACAGTACCTTAGCCGAGGTGCACTGGGACCCAGTACCTCTGAAAAGCATCCGAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS CCA 72 bp ACCAGATCAAGAGGTACTTCCAGTGCACTAATCATCTaGCACAGGAAGAGAATCAGGGGCACTCTGCCCGCA +
Preference number: 6 (lower is better)
Translates to: TRSRGTSSALII*HRKRIRGTLPA
Trigger: TGCGGGCAGAGTGCCCCTGATTCTCTTCCTGTGCCAGATGATTAGTGCACTGGAAGTACCTCTTGATCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000417701.5
ENST00000419936.5
ENST00000456431.5
ENST00000613830.4
CDS CCA 72 bp TACGGGTCCAGGAAAAGCTTGGGGGCGGTTTCCCTTTaGCTTCACACTGGATTACAATATTCTCCCGAGGGT +
Preference number: 6 (lower is better)
Translates to: YGSRKSLGAVSL*LHTGLQYSPEG
Trigger: ACCCTCGGGAGAATATTGTAATCCAGTGTGAAGCCAAAGGGAAACCGCCCCCAAGCTTTTCCTGGACCCGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000417701.5
ENST00000419936.5
ENST00000442580.5
ENST00000456431.5
ENST00000613830.4
CDS CCA 72 bp GGTGTACTCTGTCAAAATGCCATTCGGGTGGCTCGGTaGATCCCATTCCAAAGTGAGAGAGTCCAGTGTTGG +
Preference number: 6 (lower is better)
Translates to: GVLCQNAIRVAR*IPFQSERVQCW
Trigger: CCAACACTGGACTCTCTCACTTTGGAATGGGATCCACCGAGCCACCCGAATGGCATTTTGACAGAGTACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000465585.1
CDS CCA 72 bp GTCAAAGGGAGGATTTGGGACATCGTAAACGGGAGCTaGAGTTGGAGTAGGAGCAACAACGCTAAGCACAGC +
Preference number: 6 (lower is better)
Translates to: VKGRIWDIVNGS*SWSRSNNAKHS
Trigger: GCTGTGCTTAGCGTTGTTGCTCCTACTCCAACTCCAGCTCCCGTTTACGATGTCCCAAATCCTCCCTTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS CCA 72 bp CCGGCTTGCCATCGCTTTGCCTGCACCTACATCAGGTaGAAGAATACCAGCTTCATCCACAGTTGTTACTGC +
Preference number: 6 (lower is better)
Translates to: PACHRFACTYIR*KNTSFIHSCYC
Trigger: GCAGTAACAACTGTGGATGAAGCTGGTATTCTTCCACCTGATGTAGGTGCAGGCAAAGCGATGGCAAGCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379024.8
ENST00000413765.6
CDS CAA 72 bp TTACGGGTCCAGGAAAAGCTTGGGGGCGGTTTCCCTTaGGCTTCACACTGGATTACAATATTCTCCCGAGGG +
Preference number: 6 (lower is better)
Translates to: LRVQEKLGGGFP*ASHWITIFSRG
Trigger: CCCTCGGGAGAATATTGTAATCCAGTGTGAAGCCAAAGGGAAACCGCCCCCAAGCTTTTCCTGGACCCGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000417701.5
ENST00000419936.5
ENST00000442580.5
ENST00000456431.5
ENST00000613830.4
CDS GCA 72 bp AATAGTAAATCCGATAGCCTTGTAGGTGTCCTCGGATaGTTTTCAGAGGTACTGGGTCCCAGTGCACCTCGG +
Preference number: 6 (lower is better)
Translates to: NSKSDSLVGVLG*FSEVLGPSAPR
Trigger: CCGAGGTGCACTGGGACCCAGTACCTCTGAAAAGCATCCGAGGACACCTACAAGGCTATCGGATTTACTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS CCA 72 bp CGGTGGATCCCATTCCAAAGTGAGAGAGTCCAGTGTTaGATTCACAATCTTCAAAGACGAGGGAGCACTGGG +
Preference number: 6 (lower is better)
Translates to: RWIPFQSERVQC*IHNLQRRGSTG
Trigger: CCCAGTGCTCCCTCGTCTTTGAAGATTGTGAATCCAACACTGGACTCTCTCACTTTGGAATGGGATCCACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000465585.1
CDS CCA 72 bp TTTGGATCAAGAGGTACTTCCAGTGCACTAATCATCTaGCACAGGAAGAGAATCAGGGGCACTCTGCCCGCA +
Preference number: 6 (lower is better)
Translates to: FGSRGTSSALII*HRKRIRGTLPA
Trigger: TGCGGGCAGAGTGCCCCTGATTCTCTTCCTGTGCCAGATGATTAGTGCACTGGAAGTACCTCTTGATCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000418239.1
ENST00000442580.5
CDS CAA 72 bp TCAACAGTGAACCTTTCATCACTGGGCAGTTCCCTGTaGTCCTTCAGCCACAGGACAGTGAGGGATAAGGTG +
Preference number: 6 (lower is better)
Translates to: STVNLSSLGSSL*SFSHRTVRDKV
Trigger: CACCTTATCCCTCACTGTCCTGTGGCTGAAGGACAACAGGGAACTGCCCAGTGATGAAAGGTTCACTGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000613830.4
CDS TCA 72 bp CCGCTGTCATCGTCACTGACATCAGCTACCACTAGATaGTCCTTGTCAACAGTGAACCTTTCATCACTGGGC +
Preference number: 6 (lower is better)
Translates to: PLSSSLTSATTR*SLSTVNLSSLG
Trigger: GCCCAGTGATGAAAGGTTCACTGTTGACAAGGATCATCTAGTGGTAGCTGATGTCAGTGACGATGACAGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000613830.4
CDS TCA 72 bp TGCCATTCGGGTGGCTCGGTGGATCCCATTCCAAAGTaGGAGAGTCCAGTGTTGGATTCACAATCTTCAAAG +
Preference number: 6 (lower is better)
Translates to: CHSGGSVDPIPK*ESPVLDSQSSK
Trigger: CTTTGAAGATTGTGAATCCAACACTGGACTCTCTCACTTTGGAATGGGATCCACCGAGCCACCCGAATGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000465585.1
CDS TCA 72 bp CAAGGGCTTCCACGTAATCACCAAATTATCAGGCTCTaGTCCCAGTCCTTCCACAGCTGTGGGGTTTTTATC +
Preference number: 6 (lower is better)
Translates to: QGLPRNHQIIRL*SQSFHSCGVFI
Trigger: GATAAAAACCCCACAGCTGTGGAAGGACTGGGATCAGAGCCTGATAATTTGGTGATTACGTGGAAGCCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000613830.4
CDS TCA 72 bp TGTCGAAGTCTTCAGCAAACAGGGGATAAAGAATGCTaGGAGAGAATGTCACAAAGATTCCTGAGCGGCCGC +
Preference number: 6 (lower is better)
Translates to: CRSLQQTGDKEC*ERMSQRFLSGR
Trigger: GCGGCCGCTCAGGAATCTTTGTGACATTCTCTCTCAGCATTCTTTATCCCCTGTTTGCTGAAGACTTCGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418239.1
CDS CCA 72 bp ATCTTTCTGGCGCCAGCTAACTTTGTACTGAAGGCCTaGCCCATTAGATTCGAAACCATTCAAGGGCTTCCA +
Preference number: 6 (lower is better)
Translates to: IFLAPANFVLKA*PIRFETIQGLP
Trigger: TGGAAGCCCTTGAATGGTTTCGAATCTAATGGGCCAGGCCTTCAGTACAAAGTTAGCTGGCGCCAGAAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS CCA 72 bp TACTTTAAGGTGTACTCTGTCAAAATGCCATTCGGGTaGCTCGGTGGATCCCATTCCAAAGTGAGAGAGTCC +
Preference number: 6 (lower is better)
Translates to: YFKVYSVKMPFG*LGGSHSKVRES
Trigger: GGACTCTCTCACTTTGGAATGGGATCCACCGAGCCACCCGAATGGCATTTTGACAGAGTACACCTTAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000465585.1
CDS CCA 72 bp CAGATAAAAGCACTGGCAATTGAACCCTGCTGTGGCTaGCCCATGTGCAGTAAAATGTTAAAGTCCTGCTCC +
Preference number: 6 (lower is better)
Translates to: QIKALAIEPCCG*PMCSKMLKSCS
Trigger: GGAGCAGGACTTTAACATTTTACTGCACATGGGCCAGCCACAGCAGGGTTCAATTGCCAGTGCTTTTATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456431.5
CDS CAA 72 bp ACAAAACCAGAGTCCCCCACAGCACCAACTCGAACTTaGTATGCTGTTCCTGGCATTAGACCCTTTAACCCA +
Preference number: 6 (lower is better)
Translates to: TKPESPTAPTRT*YAVPGIRPFNP
Trigger: TGGGTTAAAGGGTCTAATGCCAGGAACAGCATACAAAGTTCGAGTTGGTGCTGTGGGGGACTCTGGTTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379022.8
ENST00000379028.8
CDS CAA 90 bp TCTGAACTCACAAAACCAGAGTCCCCCACAGCACCAACTCGAACTTaGTATGCTGTTCCTGGCATTAGACCCTTTAACCCAAAGAAGCTC +
Preference number: 6 (lower is better)
Translates to: SELTKPESPTAPTRT*YAVPGIRPFNPKKL
Trigger: GAGCTTCTTTGGGTTAAAGGGTCTAATGCCAGGAACAGCATACAAAGTTCGAGTTGGTGCTGTGGGGGACTCTGGTTTTGTGAGTTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379022.8
ENST00000379028.8
CDS CAA 90 bp GCAATTTCTATTGGGACTCCATTTGTTAACCAGCTAATTCTGGGTTaGGGGTTGCCATTAGCTCTGCAGATCAAGGTCCCATCCTCTCCT +
Preference number: 6 (lower is better)
Translates to: AISIGTPFVNQLILG*GLPLALQIKVPSSP
Trigger: AGGAGAGGATGGGACCTTGATCTGCAGAGCTAATGGCAACCCCAAACCCAGAATTAGCTGGTTAACAAATGGAGTCCCAATAGAAATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000417701.5
ENST00000613830.4
CDS TCA 72 bp TGTCGAAGTCTTCAGCAAACAGGGGATAAAGAATGCTaGGAGAGAATGTCACAAAGATTCGTTCTCGCGCCG +
Preference number: 6 (lower is better)
Translates to: CRSLQQTGDKEC*ERMSQRFVLAP
Trigger: CGGCGCGAGAACGAATCTTTGTGACATTCTCTCTCAGCATTCTTTATCCCCTGTTTGCTGAAGACTTCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000613830.4
CDS TCA 72 bp CCGGCAACATGCCATGAGTCTTGCTGCCTTGGAAGGTaGGGATCTTTTTCTCAATGTGACGTCTGTTTCTTT +
Preference number: 6 (lower is better)
Translates to: PATCHESCCLGR*GSFSQCDVCFF
Trigger: AAAGAAACAGACGTCACATTGAGAAAAAGATCCTCACCTTCCAAGGCAGCAAGACTCATGGCATGTTGCCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS GCA 72 bp GCATTCAAAGGACACCATGCTCCCTCTTTGCACAACTaGATATTCGGGCTGTTTAACGATCCATGTAGGATC +
Preference number: 6 (lower is better)
Translates to: AFKGHHAPSLHN*IFGLFNDPCRI
Trigger: GATCCTACATGGATCGTTAAACAGCCCGAATATGCAGTTGTGCAAAGAGGGAGCATGGTGTCCTTTGAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000613830.4
CDS CAA 72 bp ATTGGGACTCCATTTGTTAACCAGCTAATTCTGGGTTaGGGGTTGCCATTAGCTCTGCAGATCAAGGTCCCA +
Preference number: 6 (lower is better)
Translates to: IGTPFVNQLILG*GLPLALQIKVP
Trigger: TGGGACCTTGATCTGCAGAGCTAATGGCAACCCCAAACCCAGAATTAGCTGGTTAACAAATGGAGTCCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000417701.5
ENST00000489800.1
ENST00000613830.4
CDS CAA 90 bp GTCTGTGTTCCAGAAACTTCAGTTTGGTGGTGCCACAGCCCTGGCTaGTGCATTGCATCTTCATATTCGATGATGAATTTTGTAATGGGG +
Preference number: 6 (lower is better)
Translates to: VCVPETSVWWCHSPG*CIASSYSMMNFVMG
Trigger: CCCCATTACAAAATTCATCATCGAATATGAAGATGCAATGCACAAGCCAGGGCTGTGGCACCACCAAACTGAAGTTTCTGGAACACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000613830.4
CDS CAA 90 bp TTACTTTCTATTGGGACTCCATTTGTTAACCAGCTAATTCTGGGTTaGGGGTTGCCATTAGCTCTGCAGATCAAGGTCCCATCCTCTCCT +
Preference number: 6 (lower is better)
Translates to: LLSIGTPFVNQLILG*GLPLALQIKVPSSP
Trigger: AGGAGAGGATGGGACCTTGATCTGCAGAGCTAATGGCAACCCCAAACCCAGAATTAGCTGGTTAACAAATGGAGTCCCAATAGAAAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489800.1
CDS TCA 72 bp TTGGCCACCAGTGAGGTTCTATCCCTCTTTGCACTATaGAATATCATCTGGCTTAGAGCCAGCCATGTAGAA +
Preference number: 6 (lower is better)
Translates to: LATSEVLSLFAL*NIIWLRASHVE
Trigger: TTCTACATGGCTGGCTCTAAGCCAGATGATATTTCATAGTGCAAAGAGGGATAGAACCTCACTGGTGGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522550.2
CDS GCA 72 bp AATGTTATTAGAAACTGCAGCTCCGCGTTCGTTCCTTaGTGTACACTGATAGACTCCTTCATAGGTCTCAGC +
Preference number: 6 (lower is better)
Translates to: NVIRNCSSAFVP*CTLIDSFIGLS
Trigger: GCTGAGACCTATGAAGGAGTCTATCAGTGTACAGCAAGGAACGAACGCGGAGCTGCAGTTTCTAATAACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000417701.5
ENST00000613830.4
CDS GCA 72 bp ATATTCCCAACTGATATTGGCATAGGTCTCAGCAGCTaGAGCAGTAAGATTGCTGATCCTGGGATTTACTGC +
Preference number: 6 (lower is better)
Translates to: IFPTDIGIGLSS*SSKIADPGIYC
Trigger: GCAGTAAATCCCAGGATCAGCAATCTTACTGCTGCAGCTGCTGAGACCTATGCCAATATCAGTTGGGAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379022.8
ENST00000379028.8
ENST00000445634.2
CDS CCA 72 bp TGTTCCAGAAACTTCAGTTTGGTGGTGCCACAGCCCTaGCTTGTGCATTGCATCTTCATATTCGATGATGAA +
Preference number: 6 (lower is better)
Translates to: CSRNFSLVVPQP*LVHCIFIFDDE
Trigger: TTCATCATCGAATATGAAGATGCAATGCACAAGCCAGGGCTGTGGCACCACCAAACTGAAGTTTCTGGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000613830.4
CDS TCA 72 bp CATGAGTTAATAAATCCTCATACTGCTGGGAGGTCATaGACTACGATAACTGAAGATGGGGGTTCTCCTCAG +
Preference number: 6 (lower is better)
Translates to: HELINPHTAGRS*TTITEDGGSPQ
Trigger: CTGAGGAGAACCCCCATCTTCAGTTATCGTAGTTCATGACCTCCCAGCAGTATGAGGATTTATTAACTCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417701.5
CDS GCA 72 bp TTCAGTTTGGTGGTGCCACAGCCCTGGCTTGTGCATTaGATCTTCATATTCGATGATGAATTTTGTAATGGG +
Preference number: 6 (lower is better)
Translates to: FSLVVPQPWLVH*IFIFDDEFCNG
Trigger: CCCATTACAAAATTCATCATCGAATATGAAGATGCAATGCACAAGCCAGGGCTGTGGCACCACCAAACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000613830.4
CDS GCA 72 bp TTCAGTTTGGTGGTGCCACAGCCCTGGCTTGTGCATTaGATCTTCATATTCATGATGAATTCTTGTAATGGG +
Preference number: 6 (lower is better)
Translates to: FSLVVPQPWLVH*IFIFMMNSCNG
Trigger: CCCATTACAAGAATTCATCATGAATATGAAGATGCAATGCACAAGCCAGGGCTGTGGCACCACCAAACTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379022.8
CDS GCA 72 bp ACATTTCTGCAGATAAAAGCACTGGCAATTGAACCCTaGTGTGGCTGGCCCATGTGCAGTAAAATGTTAAAG +
Preference number: 6 (lower is better)
Translates to: TFLQIKALAIEP*CGWPMCSKMLK
Trigger: CTTTAACATTTTACTGCACATGGGCCAGCCACAGCAGGGTTCAATTGCCAGTGCTTTTATCTGCAGAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456431.5
CDS CCA 72 bp AATAATGTAATCTTTTGGAGACTGTTGGGTGATGGTTaGAGGCTGTACCAGATCAAGAGGTACTTCCAGTGC +
Preference number: 6 (lower is better)
Translates to: NNVIFWRLLGDG*RLYQIKRYFQC
Trigger: GCACTGGAAGTACCTCTTGATCTGGTACAGCCTCCAACCATCACCCAACAGTCTCCAAAAGATTACATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000417701.5
ENST00000419936.5
ENST00000456431.5
ENST00000613830.4
CDS CCA 72 bp TCTAGCATAACAGATATAGTCTTCGCGGGTGTCCTCTaGGAGGACATTGGAAAAATAAAGGTCCCCATTCAA +
Preference number: 6 (lower is better)
Translates to: SSITDIVFAGVL*EDIGKIKVPIQ
Trigger: TTGAATGGGGACCTTTATTTTTCCAATGTCCTCCCAGAGGACACCCGCGAAGACTATATCTGTTATGCTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000417701.5
ENST00000613830.4
CDS CCA 72 bp GATGGTTGGAGGCTGTACCAAGTCTTCAAGAAGTTTTaGATCAAGAGGTACTTCCAGTGCACTAATCATCTG +
Preference number: 6 (lower is better)
Translates to: DGWRLYQVFKKF*IKRYFQCTNHL
Trigger: CAGATGATTAGTGCACTGGAAGTACCTCTTGATCCAAAACTTCTTGAAGACTTGGTACAGCCTCCAACCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000418239.1
ENST00000442580.5
CDS CCA 72 bp ATTTACTGCTTGAACTTTGCCTGCACCTACATCAGGTaGAAGAATACCAGCTTCATCCACAGTTGTTACTGC +
Preference number: 6 (lower is better)
Translates to: IYCLNFACTYIR*KNTSFIHSCYC
Trigger: GCAGTAACAACTGTGGATGAAGCTGGTATTCTTCCACCTGATGTAGGTGCAGGCAAAGTTCAAGCAGTAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379022.8
ENST00000379028.8
CDS CCA 72 bp TGTTCCAGAAACTTCAGTTTGGTGGTGCCACAGCCCTaGCTTGTGCATTGCATCTTCATATTCATGATGAAT +
Preference number: 6 (lower is better)
Translates to: CSRNFSLVVPQP*LVHCIFIFMMN
Trigger: ATTCATCATGAATATGAAGATGCAATGCACAAGCCAGGGCTGTGGCACCACCAAACTGAAGTTTCTGGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379022.8
CDS CAA 72 bp CCAGAAACTTCAGTTTGGTGGTGCCACAGCCCTGGCTaGTGCATTGCATCTTCATATTCGATGATGAATTTT +
Preference number: 6 (lower is better)
Translates to: PETSVWWCHSPG*CIASSYSMMNF
Trigger: AAAATTCATCATCGAATATGAAGATGCAATGCACAAGCCAGGGCTGTGGCACCACCAAACTGAAGTTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000613830.4
CDS TCA 72 bp TTGCTGCCTTGGAAGGTGAGGATCTTTTTCTCAATGTaGCGTCTGTTTCTTTTAGATGAACTCTGGGTCTTC +
Preference number: 6 (lower is better)
Translates to: LLPWKVRIFFSM*RLFLLDELWVF
Trigger: GAAGACCCAGAGTTCATCTAAAAGAAACAGACGTCACATTGAGAAAAAGATCCTCACCTTCCAAGGCAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS GCA 72 bp GCAGATAAGCGCTTCTTTTTCGGCATTATTTTAAGCTaGATTAGCTTAACTCCTGCTGAGACTCACACACTG +
Preference number: 6 (lower is better)
Translates to: ADKRFFFGIILS*ISLTPAETHTL
Trigger: CAGTGTGTGAGTCTCAGCAGGAGTTAAGCTAATGCAGCTTAAAATAATGCCGAAAAAGAAGCGCTTATCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000417701.5
ENST00000418239.1
ENST00000419936.5
ENST00000442580.5
ENST00000456431.5
ENST00000613830.4
CDS CCA 72 bp AAACGTCTTCTTAGCATTGCTCTTCAGAAGGTCCACTaGGCTAGACACCTCCCAAATGTTTTTCTGATTTCT +
Preference number: 6 (lower is better)
Translates to: KRLLSIALQKVH*ARHLPNVFLIS
Trigger: AGAAATCAGAAAAACATTTGGGAGGTGTCTAGCCCAGTGGACCTTCTGAAGAGCAATGCTAAGAAGACGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351718.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000418239.1
ENST00000613830.4
CDS CAA 90 bp TCTGCAATGCACTCCAGTGAAAGCACATTTCCTCTTAATTCCTCTTaGTTACTTGCATTGCCTTCTGGAGTTAAAAATGTTGGTGGCCTC +
Preference number: 6 (lower is better)
Translates to: SAMHSSESTFPLNSS*LLALPSGVKNVGGL
Trigger: GAGGCCACCAACATTTTTAACTCCAGAAGGCAATGCAAGTAACAAAGAGGAATTAAGAGGAAATGTGCTTTCACTGGAGTGCATTGCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000417701.5
ENST00000613830.4
CDS CAA 90 bp TTGATCAGGTATGGAACAAAGGTTGGCGTGCCTGAGACAATATATTaGGATACATTTGCCACAACCACAGATGTCCATTCATCATCACCA +
Preference number: 6 (lower is better)
Translates to: LIRYGTKVGVPETIY*DTFATTTDVHSSSP
Trigger: TGGTGATGATGAATGGACATCTGTGGTTGTGGCAAATGTATCCAAATATATTGTCTCAGGCACGCCAACCTTTGTTCCATACCTGATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS CCA 72 bp ATGGAACAAAGGTTGGCGTGCCTGAGACAATATATTTaGATACATTTGCCACAACCACAGATGTCCATTCAT +
Preference number: 6 (lower is better)
Translates to: MEQRLACLRQYI*IHLPQPQMSIH
Trigger: ATGAATGGACATCTGTGGTTGTGGCAAATGTATCCAAATATATTGTCTCAGGCACGCCAACCTTTGTTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS CAA 90 bp GTCCTCTGGGAGGACATTGGAAAAATAAAGGTCCCCATTCAAACCTaGAGAAACTCTCTCACTTTGTGGAAGTCTTTGAAAGGAATTATC +
Preference number: 6 (lower is better)
Translates to: VLWEDIGKIKVPIQT*RNSLTLWKSLKGII
Trigger: GATAATTCCTTTCAAAGACTTCCACAAAGTGAGAGAGTTTCTCAAGGTTTGAATGGGGACCTTTATTTTTCCAATGTCCTCCCAGAGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000417701.5
ENST00000613830.4
CDS CAA 90 bp TCCAGTGAAAGCACATTTCCTCTTAATTCCTCTTTGTTACTTGCATaGCCTTCTGGAGTTAAAAATGTTGGTGGCCTCTCTCTACTTGAT +
Preference number: 6 (lower is better)
Translates to: SSESTFPLNSSLLLA*PSGVKNVGGLSLLD
Trigger: ATCAAGTAGAGAGAGGCCACCAACATTTTTAACTCCAGAAGGCAATGCAAGTAACAAAGAGGAATTAAGAGGAAATGTGCTTTCACTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000417701.5
ENST00000613830.4
CDS CCA 72 bp AATAATGTAATCTTTTGGAGACTGTTGGGTGATGGTTaGAGGCTGTACCAAGTCTTCAAGAAGTTTTGGATC +
Preference number: 6 (lower is better)
Translates to: NNVIFWRLLGDG*RLYQVFKKFWI
Trigger: GATCCAAAACTTCTTGAAGACTTGGTACAGCCTCCAACCATCACCCAACAGTCTCCAAAAGATTACATTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000418239.1
ENST00000442580.5
CDS TCA 72 bp GATCTTTTTCTCAATGTGACGTCTGTTTCTTTTAGATaGACTCTGGGTCTTCCAATAGTAAATCCGATAGCC +
Preference number: 6 (lower is better)
Translates to: DLFLNVTSVSFR*TLGLPIVNPIA
Trigger: GGCTATCGGATTTACTATTGGAAGACCCAGAGTTCATCTAAAAGAAACAGACGTCACATTGAGAAAAAGATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
CDS TCA 72 bp TCACCATTTATTCACTGTCGGGATGTATATATGCTCTaGAAATATACTGCAATTAGAACCACTCAAGGCAAC +
Preference number: 6 (lower is better)
Translates to: SPFIHCRDVYML*KYTAIRTTQGN
Trigger: GTTGCCTTGAGTGGTTCTAATTGCAGTATATTTTCAGAGCATATATACATCCCGACAGTGAATAAATGGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489800.1
CDS GCA 72 bp TCTTCCCATTATCCATGTAAAAAGCAGACGAAATATTaGCAAGTACCAGTCATCACATGCCATTATGTTAAC +
Preference number: 6 (lower is better)
Translates to: SSHYPCKKQTKY*QVPVITCHYVN
Trigger: GTTAACATAATGGCATGTGATGACTGGTACTTGGCAATATTTCGTCTGCTTTTTACATGGATAATGGGAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489800.1
CDS TCA 72 bp TGTTTAACGATCCATGTAGGATCTTTGATTTCTAAGTaGACTTCATTCTTCGCCATCCCTAATTTATTCCTT +
Preference number: 6 (lower is better)
Translates to: CLTIHVGSLISK*TSFFAIPNLFL
Trigger: AAGGAATAAATTAGGGATGGCGAAGAATGAAGTTCACTTAGAAATCAAAGATCCTACATGGATCGTTAAACA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351718.8
ENST00000379022.8
ENST00000379024.8
ENST00000379028.8
ENST00000413765.6
ENST00000613830.4