Pregenerated sensors for NRAS (Homo sapiens)
Ensembl gene IDs: ENSG00000213281Ensembl transcript IDs: ENST00000369535.5
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAAGAATTTCTTTCTCTGTGATGCTAACTGGATTGTTCAAGTTTTaGAACTGTGACCCTGGTCCATTAGCACCATGCTTTACTCAACTG | + |
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Preference number: 1 (lower is better) Translates to: RRISFSVMLTGLFKF*NCDPGPLAPCFTQL Trigger: CAGTTGAGTAAAGCATGGTGCTAATGGACCAGGGTCACAGTTTCAAAACTTGAACAATCCAGTTAGCATCACAGAGAAAGAAATTCTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| 3UTR TCA 90 bp | TTCTTTCTCTGTGATGCTAACTGGATTGTTCAAGTTTTGAAACTGTaGCCCTGGTCCATTAGCACCATGCTTTACTCAACTGAAATAATC | + |
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Preference number: 1 (lower is better) Translates to: FFLCDANWIVQVLKL*PWSISTMLYSTEII Trigger: GATTATTTCAGTTGAGTAAAGCATGGTGCTAATGGACCAGGGTCACAGTTTCAAAACTTGAACAATCCAGTTAGCATCACAGAGAAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| 3UTR GCA 90 bp | TACCTAGCAAAATTACTAGCTGGAGTTACTGGTGCAATGAGCAAATaGAGAAGAATTTCTTTCTCTGTGATGCTAACTGGATTGTTCAAG | + |
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Preference number: 1 (lower is better) Translates to: YLAKLLAGVTGAMSK*RRISFSVMLTGLFK Trigger: CTTGAACAATCCAGTTAGCATCACAGAGAAAGAAATTCTTCTGCATTTGCTCATTGCACCAGTAACTCCAGCTAGTAATTTTGCTAGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| 3UTR-3UTR CCA 90 bp | GAATTTCCATTTACAAATGATGACAGTACTGTGAAAGCTCCCAGAATTAGCAGTGGAAGCTGTAGAGGGTaGGGTGAGAAGGGGATTGAA | + |
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Preference number: 2 (lower is better) Translates to: EFPFTNDDSTVKAPRISSGSCRG*GEKGIE Trigger: TTCAATCCCCTTCTCACCCCACCCTCTACAGCTTCC...ACTGCTAATTCTGGGAGCTTTCACAGTACTGTCATCATTTGTAAATGGAAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| 3UTR-3UTR GCA 90 bp | GAATTACCAGGGTATTATCTGCAAATTAAAATGCCAAGCCTCCAAATCCTCATAGACCTCTTCTTTCCTTaGAGGGCTAACTGCAGCTAC | + |
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Preference number: 2 (lower is better) Translates to: ELPGYYLQIKMPSLQILIDLFFP*RANCSY Trigger: GTAGCTGCAGTTAGCCCTGCAAGGAAAGAAGAGGTC...TATGAGGATTTGGAGGCTTGGCATTTTAATTTGCAGATAATACCCTGGTAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| 3UTR-3UTR CCA 90 bp | GAATTACCAGGGTATTATCTGCAAATTAAAATGCCAAGCCTCCAAATCCTCATAAAGAGGTGCATTCTCTaGTCAGACAGCCAAGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: ELPGYYLQIKMPSLQILIKRCIL*SDSQVR Trigger: CCTCACTTGGCTGTCTGACCAGAGAATGCACCTCTT...TATGAGGATTTGGAGGCTTGGCATTTTAATTTGCAGATAATACCCTGGTAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| 3UTR-3UTR CCA 90 bp | GAATTTCCATTTACAAATGATGACAGTACTGTGAAAGCTCCCAGAATTAGCAGTGGTGTGTTTGTGCTGTaGAAGAACCCAGGGCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: EFPFTNDDSTVKAPRISSGVFVL*KNPGQK Trigger: TTTCTGCCCTGGGTTCTTCCACAGCACAAACACACC...ACTGCTAATTCTGGGAGCTTTCACAGTACTGTCATCATTTGTAAATGGAAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| 3UTR-3UTR TCA 90 bp | GAATTTCCATTTACAAATGATGACAGTACTGTGAAAGCTCCCAGAATTAGCAGTCAAGTTTTGAAACTGTaGCCCTGGTCCATTAGCACC | + |
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Preference number: 2 (lower is better) Translates to: EFPFTNDDSTVKAPRISSQVLKL*PWSIST Trigger: GGTGCTAATGGACCAGGGTCACAGTTTCAAAACTTG...ACTGCTAATTCTGGGAGCTTTCACAGTACTGTCATCATTTGTAAATGGAAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| 3UTR-3UTR TCA 90 bp | GAATTACCAGGGTATTATCTGCAAATTAAAATGCCAAGCCTCCAAATCCTCATAAGGGTTTGTGCTAACTaGCCTCTTCTTTCCTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: ELPGYYLQIKMPSLQILIRVCAN*PLLSLQ Trigger: CTGCAAGGAAAGAAGAGGTCAGTTAGCACAAACCCT...TATGAGGATTTGGAGGCTTGGCATTTTAATTTGCAGATAATACCCTGGTAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| 3UTR-3UTR GCA 90 bp | GAATTTCCATTTACAAATGATGACAGTACTGTGAAAGCTCCCAGAATTAGCAGTAGCTGGAGTTACTGGTaGAATGAGCAAATGCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: EFPFTNDDSTVKAPRISSSWSYW*NEQMQK Trigger: CTTCTGCATTTGCTCATTGCACCAGTAACTCCAGCT...ACTGCTAATTCTGGGAGCTTTCACAGTACTGTCATCATTTGTAAATGGAAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| 3UTR-3UTR GCA 90 bp | GAATTTCCATTTACAAATGATGACAGTACTGTGAAAGCTCCCAGAATTAGCAGTCCTTGCAGGGCTAACTaGAGCTACCTAGCAAAATTA | + |
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Preference number: 2 (lower is better) Translates to: EFPFTNDDSTVKAPRISSPCRAN*SYLAKL Trigger: TAATTTTGCTAGGTAGCTGCAGTTAGCCCTGCAAGG...ACTGCTAATTCTGGGAGCTTTCACAGTACTGTCATCATTTGTAAATGGAAATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| 3UTR-3UTR CCA 90 bp | GAATTTCCATTTACAAATGATGACAGTACTGTGAAAGCTCCCAGAATTAGCAGTTTCACGTTTGCGGTTTaGTTCTCTGTTTCAGACATG | + |
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Preference number: 2 (lower is better) Translates to: EFPFTNDDSTVKAPRISSFTFAV*FSVSDM Trigger: CATGTCTGAAACAGAGAACCAAACCGCAAACGTGAA...ACTGCTAATTCTGGGAGCTTTCACAGTACTGTCATCATTTGTAAATGGAAATTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| 3UTR-3UTR TCA 90 bp | GAATTACCAGGGTATTATCTGCAAATTAAAATGCCAAGCCTCCAAATCCTCATAGAGTTACTGGTGCAATaGGCAAATGCAGAAGAATTT | + |
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Preference number: 2 (lower is better) Translates to: ELPGYYLQIKMPSLQILIELLVQ*ANAEEF Trigger: AAATTCTTCTGCATTTGCTCATTGCACCAGTAACTC...TATGAGGATTTGGAGGCTTGGCATTTTAATTTGCAGATAATACCCTGGTAATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| 3UTR-3UTR TCA 90 bp | GAATTTCCATTTACAAATGATGACAGTACTGTGAAAGCTCCCAGAATTAGCAGTAAAACGTTTCTCAGCTaGGACATCCTCATTCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: EFPFTNDDSTVKAPRISSKTFLS*DILILK Trigger: TTTGAGAATGAGGATGTCTCAGCTGAGAAACGTTTT...ACTGCTAATTCTGGGAGCTTTCACAGTACTGTCATCATTTGTAAATGGAAATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| 3UTR-3UTR GCA 90 bp | GAATTACCAGGGTATTATCTGCAAATTAAAATGCCAAGCCTCCAAATCCTCATAAAAATCACCAGCAGTTaGTACTTTAGAGCTCAAGAC | + |
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Preference number: 2 (lower is better) Translates to: ELPGYYLQIKMPSLQILIKITSS*YFRAQD Trigger: GTCTTGAGCTCTAAAGTAGCAACTGCTGGTGATTTT...TATGAGGATTTGGAGGCTTGGCATTTTAATTTGCAGATAATACCCTGGTAATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| 3UTR-3UTR GCA 90 bp | GAATTACCAGGGTATTATCTGCAAATTAAAATGCCAAGCCTCCAAATCCTCATAATAGAATTTCACGTTTaGGGTTTGGTTCTCTGTTTC | + |
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Preference number: 2 (lower is better) Translates to: ELPGYYLQIKMPSLQILIIEFHV*GLVLCF Trigger: GAAACAGAGAACCAAACCGCAAACGTGAAATTCTAT...TATGAGGATTTGGAGGCTTGGCATTTTAATTTGCAGATAATACCCTGGTAATTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| 3UTR-3UTR GCA 90 bp | GAATTTCCATTTACAAATGATGACAGTACTGTGAAAGCTCCCAGAATTAGCAGTTACCAGGGTATTATCTaGAAATTAAAATGCCAAGCC | + |
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Preference number: 2 (lower is better) Translates to: EFPFTNDDSTVKAPRISSYQGII*KLKCQA Trigger: GGCTTGGCATTTTAATTTGCAGATAATACCCTGGTA...ACTGCTAATTCTGGGAGCTTTCACAGTACTGTCATCATTTGTAAATGGAAATTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| 3UTR-3UTR GCA 90 bp | GAATTTCCATTTACAAATGATGACAGTACTGTGAAAGCTCCCAGAATTAGCAGTGTACAAAATGGCATCTaGTCTCAAATAGATATAGCT | + |
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Preference number: 2 (lower is better) Translates to: EFPFTNDDSTVKAPRISSVQNGI*SQIDIA Trigger: AGCTATATCTATTTGAGAGCAGATGCCATTTTGTAC...ACTGCTAATTCTGGGAGCTTTCACAGTACTGTCATCATTTGTAAATGGAAATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| 3UTR-3UTR GCA 90 bp | GAATTTCCATTTACAAATGATGACAGTACTGTGAAAGCTCCCAGAATTAGCAGTCAATATTTGAACATCTaGAAATGTAGAGCTTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: EFPFTNDDSTVKAPRISSQYLNI*KCRAFW Trigger: CCAGAAAGCTCTACATTTGCAGATGTTCAAATATTG...ACTGCTAATTCTGGGAGCTTTCACAGTACTGTCATCATTTGTAAATGGAAATTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| 3UTR-3UTR CAA 90 bp | GAATTTCCATTTACAAATGATGACAGTACTGTGAAAGCTCCCAGAATTAGCAGTGTGGCAGAGGTGTGTTaGTGCTGTGGAAGAACCCAG | + |
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Preference number: 3 (lower is better) Translates to: EFPFTNDDSTVKAPRISSVAEVC*CCGRTQ Trigger: CTGGGTTCTTCCACAGCACAAACACACCTCTGCCAC...ACTGCTAATTCTGGGAGCTTTCACAGTACTGTCATCATTTGTAAATGGAAATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| 3UTR TCA 72 bp | GTAACAAGAGGTGCATTCTCTGGTCAGACAGCCAAGTaGGGAGGTAGTTATTCTGAGAACTTCTCAAATAGA | + |
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Preference number: 3 (lower is better) Translates to: VTRGAFSGQTAK*GGSYSENFSNR Trigger: TCTATTTGAGAAGTTCTCAGAATAACTACCTCCTCACTTGGCTGTCTGACCAGAGAATGCACCTCTTGTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| 3UTR TCA 72 bp | TCTTTCTCTGTGATGCTAACTGGATTGTTCAAGTTTTaGAACTGTGACCCTGGTCCATTAGCACCATGCTTT | + |
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Preference number: 3 (lower is better) Translates to: SFSVMLTGLFKF*NCDPGPLAPCF Trigger: AAAGCATGGTGCTAATGGACCAGGGTCACAGTTTCAAAACTTGAACAATCCAGTTAGCATCACAGAGAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| 3UTR GCA 72 bp | CAGCTACCTAGCAAAATTACTAGCTGGAGTTACTGGTaGAATGAGCAAATGCAGAAGAATTTCTTTCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: QLPSKITSWSYW*NEQMQKNFFLC Trigger: ACAGAGAAAGAAATTCTTCTGCATTTGCTCATTGCACCAGTAACTCCAGCTAGTAATTTTGCTAGGTAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| 3UTR-3UTR CAA 90 bp | GAATTTCCATTTACAAATGATGACAGTACTGTGAAAGCTCCCAGAATTAGCAGTTTTCACGTTTGCGGTTaGGTTCTCTGTTTCAGACAT | + |
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Preference number: 3 (lower is better) Translates to: EFPFTNDDSTVKAPRISSFHVCG*VLCFRH Trigger: ATGTCTGAAACAGAGAACCAAACCGCAAACGTGAAA...ACTGCTAATTCTGGGAGCTTTCACAGTACTGTCATCATTTGTAAATGGAAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| 3UTR-3UTR CAA 90 bp | GAATTACCAGGGTATTATCTGCAAATTAAAATGCCAAGCCTCCAAATCCTCATAAATAGAATTTCACGTTaGCGGTTTGGTTCTCTGTTT | + |
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Preference number: 3 (lower is better) Translates to: ELPGYYLQIKMPSLQILINRISR*RFGSLF Trigger: AAACAGAGAACCAAACCGCAAACGTGAAATTCTATT...TATGAGGATTTGGAGGCTTGGCATTTTAATTTGCAGATAATACCCTGGTAATTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR CCA 90 bp | GAATACTTCTCCTCCAGGGAAGTCAGGACCAGGGTGTCAGTGCAGCTTGAAAGTGGAAGCTGTAGAGGGTaGGGTGAGAAGGGGATTGAA | + |
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Preference number: 4 (lower is better) Translates to: EYFSSREVRTRVSVQLESGSCRG*GEKGIE Trigger: TTCAATCCCCTTCTCACCCCACCCTCTACAGCTTCC...ACTTTCAAGCTGCACTGACACCCTGGTCCTGACTTCCCTGGAGGAGAAGTATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR TCA 90 bp | GAATACTTCTCCTCCAGGGAAGTCAGGACCAGGGTGTCAGTGCAGCTTGAAAGTAATCCCATACAACCCTaGGTCCCATCATCACTGCTG | + |
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Preference number: 4 (lower is better) Translates to: EYFSSREVRTRVSVQLESNPIQP*VPSSLL Trigger: CAGCAGTGATGATGGGACTCAGGGTTGTATGGGATT...ACTTTCAAGCTGCACTGACACCCTGGTCCTGACTTCCCTGGAGGAGAAGTATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR TCA 90 bp | GAATACTTCTCCTCCAGGGAAGTCAGGACCAGGGTGTCAGTGCAGCTTGAAAGTGGTCAGACAGCCAAGTaGGGAGGTAGTTATTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: EYFSSREVRTRVSVQLESGQTAK*GGSYSE Trigger: CTCAGAATAACTACCTCCTCACTTGGCTGTCTGACC...ACTTTCAAGCTGCACTGACACCCTGGTCCTGACTTCCCTGGAGGAGAAGTATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR GCA 90 bp | GAATACTTCTCCTCCAGGGAAGTCAGGACCAGGGTGTCAGTGCAGCTTGAAAGTTTTCCCAACACCACCTaGTCCAACCACCACCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: EYFSSREVRTRVSVQLESFPNTT*SNHHQF Trigger: AAACTGGTGGTGGTTGGAGCAGGTGGTGTTGGGAAA...ACTTTCAAGCTGCACTGACACCCTGGTCCTGACTTCCCTGGAGGAGAAGTATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR GCA 90 bp | GAATACTTCTCCTCCAGGGAAGTCAGGACCAGGGTGTCAGTGCAGCTTGAAAGTGACCTCTTCTTTCCTTaGAGGGCTAACTGCAGCTAC | + |
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Preference number: 4 (lower is better) Translates to: EYFSSREVRTRVSVQLESDLFFP*RANCSY Trigger: GTAGCTGCAGTTAGCCCTGCAAGGAAAGAAGAGGTC...ACTTTCAAGCTGCACTGACACCCTGGTCCTGACTTCCCTGGAGGAGAAGTATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR CCA 90 bp | GAATACTTCTCCTCCAGGGAAGTCAGGACCAGGGTGTCAGTGCAGCTTGAAAGTCCACTGCCTCTGCTTTaGACAGATTTAGGACCACAG | + |
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Preference number: 4 (lower is better) Translates to: EYFSSREVRTRVSVQLESPLPLL*TDLGPQ Trigger: CTGTGGTCCTAAATCTGTCCAAAGCAGAGGCAGTGG...ACTTTCAAGCTGCACTGACACCCTGGTCCTGACTTCCCTGGAGGAGAAGTATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR TCA 90 bp | GAATTACCAGGGTATTATCTGCAAATTAAAATGCCAAGCCTCCAAATCCTCATAACCCCGGAACCGCCATaGACAGCCCCCACCAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: ELPGYYLQIKMPSLQILITPEPP*TAPTKE Trigger: CTCCTTGGTGGGGGCTGTTCATGGCGGTTCCGGGGT...TATGAGGATTTGGAGGCTTGGCATTTTAATTTGCAGATAATACCCTGGTAATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR CCA 90 bp | GAATACTTCTCCTCCAGGGAAGTCAGGACCAGGGTGTCAGTGCAGCTTGAAAGTTTACATCACCACACATaGCAATCCCATACAACCCTG | + |
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Preference number: 4 (lower is better) Translates to: EYFSSREVRTRVSVQLESLHHHT*QSHTTL Trigger: CAGGGTTGTATGGGATTGCCATGTGTGGTGATGTAA...ACTTTCAAGCTGCACTGACACCCTGGTCCTGACTTCCCTGGAGGAGAAGTATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR TCA 90 bp | GAATACTTCTCCTCCAGGGAAGTCAGGACCAGGGTGTCAGTGCAGCTTGAAAGTGTTAATATCCGCAAATaGCTTGCTATTATTGATGGC | + |
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Preference number: 4 (lower is better) Translates to: EYFSSREVRTRVSVQLESVNIRK*LAIIDG Trigger: GCCATCAATAATAGCAAGTCATTTGCGGATATTAAC...ACTTTCAAGCTGCACTGACACCCTGGTCCTGACTTCCCTGGAGGAGAAGTATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR CCA 90 bp | GAATACTTCTCCTCCAGGGAAGTCAGGACCAGGGTGTCAGTGCAGCTTGAAAGTTTTTTCATTCGGTACTaGCGTATTTCTCTTACCAGT | + |
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Preference number: 4 (lower is better) Translates to: EYFSSREVRTRVSVQLESFFIRY*RISLTS Trigger: ACTGGTAAGAGAAATACGCCAGTACCGAATGAAAAA...ACTTTCAAGCTGCACTGACACCCTGGTCCTGACTTCCCTGGAGGAGAAGTATTC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR GCA 90 bp | GAATTACCAGGGTATTATCTGCAAATTAAAATGCCAAGCCTCCAAATCCTCATAGCAGAGGTGTGTTTGTaGTGTGGAAGAACCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: ELPGYYLQIKMPSLQILIAEVCL*CGRTQG Trigger: GCCCTGGGTTCTTCCACAGCACAAACACACCTCTGC...TATGAGGATTTGGAGGCTTGGCATTTTAATTTGCAGATAATACCCTGGTAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR CCA 90 bp | GAATTACCAGGGTATTATCTGCAAATTAAAATGCCAAGCCTCCAAATCCTCATAAGCCGGGAAAAATGTTaGAGACCCCGGAACCGCCAT | + |
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Preference number: 4 (lower is better) Translates to: ELPGYYLQIKMPSLQILISREKC*RPRNRH Trigger: ATGGCGGTTCCGGGGTCTCCAACATTTTTCCCGGCT...TATGAGGATTTGGAGGCTTGGCATTTTAATTTGCAGATAATACCCTGGTAATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR CCA 90 bp | GAATACTTCTCCTCCAGGGAAGTCAGGACCAGGGTGTCAGTGCAGCTTGAAAGTCTCTGTGATGCTAACTaGATTGTTCAAGTTTTGAAA | + |
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Preference number: 4 (lower is better) Translates to: EYFSSREVRTRVSVQLESLCDAN*IVQVLK Trigger: TTTCAAAACTTGAACAATCCAGTTAGCATCACAGAG...ACTTTCAAGCTGCACTGACACCCTGGTCCTGACTTCCCTGGAGGAGAAGTATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR TCA 90 bp | GAATTTCCATTTACAAATGATGACAGTACTGTGAAAGCTCCCAGAATTAGCAGTGGTGTCAGTGCAGCTTaGAAGTGGCTCTTTTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: EFPFTNDDSTVKAPRISSGVSAA*KWLFSD Trigger: GTCAGAAAAGAGCCACTTTCAAGCTGCACTGACACC...ACTGCTAATTCTGGGAGCTTTCACAGTACTGTCATCATTTGTAAATGGAAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR CCA 90 bp | GAATTACCAGGGTATTATCTGCAAATTAAAATGCCAAGCCTCCAAATCCTCATAGAATCCCGTAACTCTTaGCCAGTTCGTGGGCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: ELPGYYLQIKMPSLQILIESRNS*PVRGLV Trigger: AACAAGCCCACGAACTGGCCAAGAGTTACGGGATTC...TATGAGGATTTGGAGGCTTGGCATTTTAATTTGCAGATAATACCCTGGTAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR CCA 90 bp | GAATTACCAGGGTATTATCTGCAAATTAAAATGCCAAGCCTCCAAATCCTCATAGTAACCTCCACCTCCTaGGTTGAAGTGATTCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: ELPGYYLQIKMPSLQILIVTSTS*VEVILL Trigger: CAGGAGAATCACTTCAACCCAGGAGGTGGAGGTTAC...TATGAGGATTTGGAGGCTTGGCATTTTAATTTGCAGATAATACCCTGGTAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR TCA 90 bp | GAATTACCAGGGTATTATCTGCAAATTAAAATGCCAAGCCTCCAAATCCTCATACAAGTTTTGAAACTGTaGCCCTGGTCCATTAGCACC | + |
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Preference number: 4 (lower is better) Translates to: ELPGYYLQIKMPSLQILIQVLKL*PWSIST Trigger: GGTGCTAATGGACCAGGGTCACAGTTTCAAAACTTG...TATGAGGATTTGGAGGCTTGGCATTTTAATTTGCAGATAATACCCTGGTAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR GCA 90 bp | GAATTACCAGGGTATTATCTGCAAATTAAAATGCCAAGCCTCCAAATCCTCATAAACCTCAAGCTCCACTaGCTCTGCTTTGGACAGATT | + |
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Preference number: 4 (lower is better) Translates to: ELPGYYLQIKMPSLQILINLKLH*LCFGQI Trigger: AATCTGTCCAAAGCAGAGGCAGTGGAGCTTGAGGTT...TATGAGGATTTGGAGGCTTGGCATTTTAATTTGCAGATAATACCCTGGTAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR CCA 90 bp | GAATTACCAGGGTATTATCTGCAAATTAAAATGCCAAGCCTCCAAATCCTCATACTTCAACACCCTGTCTaGTCTTGGCTGAGGTTTCAA | + |
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Preference number: 4 (lower is better) Translates to: ELPGYYLQIKMPSLQILILQHPV*SWLRFQ Trigger: TTGAAACCTCAGCCAAGACCAGACAGGGTGTTGAAG...TATGAGGATTTGGAGGCTTGGCATTTTAATTTGCAGATAATACCCTGGTAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR TCA 90 bp | GAATTTCCATTTACAAATGATGACAGTACTGTGAAAGCTCCCAGAATTAGCAGTTGGCTGAGGTTTCAATaGATGGAATCCCGTAACTCT | + |
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Preference number: 4 (lower is better) Translates to: EFPFTNDDSTVKAPRISSWLRFQ*MESRNS Trigger: AGAGTTACGGGATTCCATTCATTGAAACCTCAGCCA...ACTGCTAATTCTGGGAGCTTTCACAGTACTGTCATCATTTGTAAATGGAAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR TCA 90 bp | GAATTTCCATTTACAAATGATGACAGTACTGTGAAAGCTCCCAGAATTAGCAGTGGATTGTTCAAGTTTTaGAACTGTGACCCTGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: EFPFTNDDSTVKAPRISSGLFKF*NCDPGP Trigger: TGGACCAGGGTCACAGTTTCAAAACTTGAACAATCC...ACTGCTAATTCTGGGAGCTTTCACAGTACTGTCATCATTTGTAAATGGAAATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR TCA 90 bp | GAATTTCCATTTACAAATGATGACAGTACTGTGAAAGCTCCCAGAATTAGCAGTCACAAGAGCCCAAGATaGGTAACTATCTTTCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: EFPFTNDDSTVKAPRISSHKSPR*VTIFLP Trigger: AGGGAGAAAGATAGTTACTCATCTTGGGCTCTTGTG...ACTGCTAATTCTGGGAGCTTTCACAGTACTGTCATCATTTGTAAATGGAAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR GCA 90 bp | GAATTACCAGGGTATTATCTGCAAATTAAAATGCCAAGCCTCCAAATCCTCATAAGCTGGAGTTACTGGTaGAATGAGCAAATGCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: ELPGYYLQIKMPSLQILISWSYW*NEQMQK Trigger: CTTCTGCATTTGCTCATTGCACCAGTAACTCCAGCT...TATGAGGATTTGGAGGCTTGGCATTTTAATTTGCAGATAATACCCTGGTAATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR CCA 90 bp | GAATTACCAGGGTATTATCTGCAAATTAAAATGCCAAGCCTCCAAATCCTCATACTCTTGGCCAGTTCGTaGGCTTGTTTTGTATCAACT | + |
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Preference number: 4 (lower is better) Translates to: ELPGYYLQIKMPSLQILILLASS*ACFVST Trigger: AGTTGATACAAAACAAGCCCACGAACTGGCCAAGAG...TATGAGGATTTGGAGGCTTGGCATTTTAATTTGCAGATAATACCCTGGTAATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR TCA 90 bp | GAATTACCAGGGTATTATCTGCAAATTAAAATGCCAAGCCTCCAAATCCTCATAATGATGACAGTACTGTaGAAGCTCCCAGAATTAGCA | + |
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Preference number: 4 (lower is better) Translates to: ELPGYYLQIKMPSLQILIMMTVL*KLPELA Trigger: TGCTAATTCTGGGAGCTTTCACAGTACTGTCATCAT...TATGAGGATTTGGAGGCTTGGCATTTTAATTTGCAGATAATACCCTGGTAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| 3UTR CAA 72 bp | ACTTGGAAAACTCTAAGTACATACATACAAGGGCTATaGGCACAAGAGCCCAAGATGAGTAACTATCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: TWKTLSTYIQGL*AQEPKMSNYLS Trigger: AGAAAGATAGTTACTCATCTTGGGCTCTTGTGCCAATAGCCCTTGTATGTATGTACTTAGAGTTTTCCAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR TCA 90 bp | GAATTTCCATTTACAAATGATGACAGTACTGTGAAAGCTCCCAGAATTAGCAGTGAGTTACTGGTGCAATaGGCAAATGCAGAAGAATTT | + |
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Preference number: 4 (lower is better) Translates to: EFPFTNDDSTVKAPRISSELLVQ*ANAEEF Trigger: AAATTCTTCTGCATTTGCTCATTGCACCAGTAACTC...ACTGCTAATTCTGGGAGCTTTCACAGTACTGTCATCATTTGTAAATGGAAATTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR TCA 90 bp | GAATTTCCATTTACAAATGATGACAGTACTGTGAAAGCTCCCAGAATTAGCAGTGAACATACTCAAGTCTaGATTTTGGCCCCATTTAGA | + |
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Preference number: 4 (lower is better) Translates to: EFPFTNDDSTVKAPRISSEHTQV*ILAPFR Trigger: TCTAAATGGGGCCAAAATTCAGACTTGAGTATGTTC...ACTGCTAATTCTGGGAGCTTTCACAGTACTGTCATCATTTGTAAATGGAAATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR GCA 90 bp | GAATTTCCATTTACAAATGATGACAGTACTGTGAAAGCTCCCAGAATTAGCAGTAAAATCACCAGCAGTTaGTACTTTAGAGCTCAAGAC | + |
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Preference number: 4 (lower is better) Translates to: EFPFTNDDSTVKAPRISSKITSS*YFRAQD Trigger: GTCTTGAGCTCTAAAGTAGCAACTGCTGGTGATTTT...ACTGCTAATTCTGGGAGCTTTCACAGTACTGTCATCATTTGTAAATGGAAATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR CCA 90 bp | GAATTTCCATTTACAAATGATGACAGTACTGTGAAAGCTCCCAGAATTAGCAGTTCTACAAAGTGGTTCTaGATTAGCTGGATTGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EFPFTNDDSTVKAPRISSSTKWF*ISWIVS Trigger: ACTGACAATCCAGCTAATCCAGAACCACTTTGTAGA...ACTGCTAATTCTGGGAGCTTTCACAGTACTGTCATCATTTGTAAATGGAAATTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| 3UTR CAA 72 bp | AAGACACTGTTTTCAATAGAATTTCACGTTTGCGGTTaGGTTCTCTGTTTCAGACATGAACTGCTTTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: KTLFSIEFHVCG*VLCFRHELLFR Trigger: TCTGAAAAGCAGTTCATGTCTGAAACAGAGAACCAAACCGCAAACGTGAAATTCTATTGAAAACAGTGTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| 3UTR CAA 72 bp | TGGCCCCATTTAGAAACTTCTGTGCTTAGAACATACTaGGAAAACTCTAAGTACATACATACAAGGGCTATT | + |
|
Preference number: 4 (lower is better) Translates to: WPHLETSVLRTY*ENSKYIHTRAI Trigger: AATAGCCCTTGTATGTATGTACTTAGAGTTTTCCAAGTATGTTCTAAGCACAGAAGTTTCTAAATGGGGCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR GCA 90 bp | GAATTTCCATTTACAAATGATGACAGTACTGTGAAAGCTCCCAGAATTAGCAGTATCTGCAAATTAAAATaGCAAGCCTCCAAATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EFPFTNDDSTVKAPRISSICKLK*QASKSS Trigger: TGAGGATTTGGAGGCTTGGCATTTTAATTTGCAGAT...ACTGCTAATTCTGGGAGCTTTCACAGTACTGTCATCATTTGTAAATGGAAATTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR GCA 90 bp | GAATTACCAGGGTATTATCTGCAAATTAAAATGCCAAGCCTCCAAATCCTCATAGTACAAAATGGCATCTaGTCTCAAATAGATATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ELPGYYLQIKMPSLQILIVQNGI*SQIDIA Trigger: AGCTATATCTATTTGAGAGCAGATGCCATTTTGTAC...TATGAGGATTTGGAGGCTTGGCATTTTAATTTGCAGATAATACCCTGGTAATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR CCA 90 bp | GAATTTCCATTTACAAATGATGACAGTACTGTGAAAGCTCCCAGAATTAGCAGTTATTCATCTACAAAGTaGTTCTGGATTAGCTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: EFPFTNDDSTVKAPRISSYSSTK*FWISWI Trigger: AATCCAGCTAATCCAGAACCACTTTGTAGATGAATA...ACTGCTAATTCTGGGAGCTTTCACAGTACTGTCATCATTTGTAAATGGAAATTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR CAA 90 bp | GAATACTTCTCCTCCAGGGAAGTCAGGACCAGGGTGTCAGTGCAGCTTGAAAGTGTGGCAGAGGTGTGTTaGTGCTGTGGAAGAACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EYFSSREVRTRVSVQLESVAEVC*CCGRTQ Trigger: CTGGGTTCTTCCACAGCACAAACACACCTCTGCCAC...ACTTTCAAGCTGCACTGACACCCTGGTCCTGACTTCCCTGGAGGAGAAGTATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR CAA 90 bp | GAATACTTCTCCTCCAGGGAAGTCAGGACCAGGGTGTCAGTGCAGCTTGAAAGTGGCCAGTTCGTGGGCTaGTTTTGTATCAACTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: EYFSSREVRTRVSVQLESGQFVG*FCINCP Trigger: AGGACAGTTGATACAAAACAAGCCCACGAACTGGCC...ACTTTCAAGCTGCACTGACACCCTGGTCCTGACTTCCCTGGAGGAGAAGTATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR CAA 90 bp | GAATTACCAGGGTATTATCTGCAAATTAAAATGCCAAGCCTCCAAATCCTCATACAGCCGGGAAAAATGTaGGAGACCCCGGAACCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ELPGYYLQIKMPSLQILIQPGKM*ETPEPP Trigger: TGGCGGTTCCGGGGTCTCCAACATTTTTCCCGGCTG...TATGAGGATTTGGAGGCTTGGCATTTTAATTTGCAGATAATACCCTGGTAATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR CAA 90 bp | GAATACTTCTCCTCCAGGGAAGTCAGGACCAGGGTGTCAGTGCAGCTTGAAAGTACCATCTATAACCACTaGTTTTCTGTAAGAATCCTC | + |
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Preference number: 5 (lower is better) Translates to: EYFSSREVRTRVSVQLESTIYNH*FSVRIL Trigger: GAGGATTCTTACAGAAAACAAGTGGTTATAGATGGT...ACTTTCAAGCTGCACTGACACCCTGGTCCTGACTTCCCTGGAGGAGAAGTATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR CAA 90 bp | GAATACTTCTCCTCCAGGGAAGTCAGGACCAGGGTGTCAGTGCAGCTTGAAAGTAATAGAATTTCACGTTaGCGGTTTGGTTCTCTGTTT | + |
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Preference number: 5 (lower is better) Translates to: EYFSSREVRTRVSVQLESNRISR*RFGSLF Trigger: AAACAGAGAACCAAACCGCAAACGTGAAATTCTATT...ACTTTCAAGCTGCACTGACACCCTGGTCCTGACTTCCCTGGAGGAGAAGTATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR CAA 90 bp | GAATTACCAGGGTATTATCTGCAAATTAAAATGCCAAGCCTCCAAATCCTCATATCCACTGCCTCTGCTTaGGACAGATTTAGGACCACA | + |
|
Preference number: 5 (lower is better) Translates to: ELPGYYLQIKMPSLQILISTASA*DRFRTT Trigger: TGTGGTCCTAAATCTGTCCAAAGCAGAGGCAGTGGA...TATGAGGATTTGGAGGCTTGGCATTTTAATTTGCAGATAATACCCTGGTAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR CAA 90 bp | GAATTTCCATTTACAAATGATGACAGTACTGTGAAAGCTCCCAGAATTAGCAGTCCAACCACCACCAGTTaGTACTCAGTCATTTCACAC | + |
|
Preference number: 5 (lower is better) Translates to: EFPFTNDDSTVKAPRISSPTTTS*YSVISH Trigger: GTGTGAAATGACTGAGTACAAACTGGTGGTGGTTGG...ACTGCTAATTCTGGGAGCTTTCACAGTACTGTCATCATTTGTAAATGGAAATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR CAA 90 bp | GAATTTCCATTTACAAATGATGACAGTACTGTGAAAGCTCCCAGAATTAGCAGTTCTGGATTAGCTGGATaGTCAGTGCGCTTTTCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: EFPFTNDDSTVKAPRISSSGLAG*SVRFSQ Trigger: TTGGGAAAAGCGCACTGACAATCCAGCTAATCCAGA...ACTGCTAATTCTGGGAGCTTTCACAGTACTGTCATCATTTGTAAATGGAAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR CAA 90 bp | GAATTACCAGGGTATTATCTGCAAATTAAAATGCCAAGCCTCCAAATCCTCATAGGCACTGTACTCTTCTaGTCCAGCTGTATCCAGTAT | + |
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Preference number: 5 (lower is better) Translates to: ELPGYYLQIKMPSLQILIGTVLF*SSCIQY Trigger: ATACTGGATACAGCTGGACAAGAAGAGTACAGTGCC...TATGAGGATTTGGAGGCTTGGCATTTTAATTTGCAGATAATACCCTGGTAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR CAA 90 bp | GAATTTCCATTTACAAATGATGACAGTACTGTGAAAGCTCCCAGAATTAGCAGTTACATACAAGGGCTATaGGCACAAGAGCCCAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: EFPFTNDDSTVKAPRISSYIQGL*AQEPKM Trigger: CATCTTGGGCTCTTGTGCCAATAGCCCTTGTATGTA...ACTGCTAATTCTGGGAGCTTTCACAGTACTGTCATCATTTGTAAATGGAAATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR CAA 90 bp | GAATTACCAGGGTATTATCTGCAAATTAAAATGCCAAGCCTCCAAATCCTCATAGTTCGTGGGCTTGTTTaGTATCAACTGTCCTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: ELPGYYLQIKMPSLQILIVRGLV*YQLSLL Trigger: CAACAAGGACAGTTGATACAAAACAAGCCCACGAAC...TATGAGGATTTGGAGGCTTGGCATTTTAATTTGCAGATAATACCCTGGTAATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS-3UTR CAA 90 bp | GAATTACCAGGGTATTATCTGCAAATTAAAATGCCAAGCCTCCAAATCCTCATATTTCACGTTTGCGGTTaGGTTCTCTGTTTCAGACAT | + |
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Preference number: 5 (lower is better) Translates to: ELPGYYLQIKMPSLQILIFHVCG*VLCFRH Trigger: ATGTCTGAAACAGAGAACCAAACCGCAAACGTGAAA...TATGAGGATTTGGAGGCTTGGCATTTTAATTTGCAGATAATACCCTGGTAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS TCA 72 bp | CTTCAACACCCTGTCTGGTCTTGGCTGAGGTTTCAATaGATGGAATCCCGTAACTCTTGGCCAGTTCGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LQHPVWSWLRFQ*MESRNSWPVRG Trigger: CCCACGAACTGGCCAAGAGTTACGGGATTCCATTCATTGAAACCTCAGCCAAGACCAGACAGGGTGTTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS CAA 72 bp | ACACCAGCAAGAACCTCAAGCTCCACTGCCTCTGCTTaGGACAGATTTAGGACCACAGCCGGGAAAAATGTT | + |
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Preference number: 6 (lower is better) Translates to: TPARTSSSTASA*DRFRTTAGKNV Trigger: AACATTTTTCCCGGCTGTGGTCCTAAATCTGTCCAAAGCAGAGGCAGTGGAGCTTGAGGTTCTTGCTGGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS CCA 72 bp | CAAAACTTTAAAAGTATCTTGTTACATCACCACACATaGCAATCCCATACAACCCTGAGTCCCATCATCACT | + |
|
Preference number: 6 (lower is better) Translates to: QNFKSILLHHHT*QSHTTLSPIIT Trigger: AGTGATGATGGGACTCAGGGTTGTATGGGATTGCCATGTGTGGTGATGTAACAAGATACTTTTAAAGTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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| CDS CAA 72 bp | TATGTCCAACAAACAGGTTTCACCATCTATAACCACTaGTTTTCTGTAAGAATCCTCTATGGTGGGATCATA | + |
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Preference number: 6 (lower is better) Translates to: YVQQTGFTIYNH*FSVRILYGGII Trigger: TATGATCCCACCATAGAGGATTCTTACAGAAAACAAGTGGTTATAGATGGTGAAACCTGTTTGTTGGACATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369535.5 |
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