RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NR5A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000116833

Ensembl transcript IDs: ENST00000236914.7, ENST00000367357.3, ENST00000367362.8, ENST00000447034.1, ENST00000474307.1, ENST00000544748.5

Found 520 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGTCCTCCGGTTCCCAGCCCTCTGCGGTGGGACCGATTCCAGAGCTaGAGGTGTTCTCTGTTTACGCTCAGAGTGTACCGCCTCGGTCCC +
Preference number: 1 (lower is better)
Translates to: SPPVPSPLRWDRFQS*RCSLFTLRVYRLGP
Trigger: GGGACCGAGGCGGTACACTCTGAGCGTAAACAGAGAACACCTGCAGCTCTGGAATCGGTCCCACCGCAGAGGGCTGGGAACCGGAGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR GCA 90 bp AGCCCCTTATGGGCTGGACCGACAGTCCTCCGGTTCCCAGCCCTCTaGGGTGGGACCGATTCCAGAGCTGCAGGTGTTCTCTGTTTACGC +
Preference number: 1 (lower is better)
Translates to: SPLWAGPTVLRFPAL*GGTDSRAAGVLCLR
Trigger: GCGTAAACAGAGAACACCTGCAGCTCTGGAATCGGTCCCACCGCAGAGGGCTGGGAACCGGAGGACTGTCGGTCCAGCCCATAAGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR CCA 90 bp TCCCGGAATCCGGCGCCCGGAAGTGCCTGCACAGGTTTAGGATGTTaGGGTAGTCTCGCTGAGGCCAGGGGAGAGCCTTCTTCGGTACTT +
Preference number: 1 (lower is better)
Translates to: SRNPAPGSACTGLGC*GSLAEARGEPSSVL
Trigger: AAGTACCGAAGAAGGCTCTCCCCTGGCCTCAGCGAGACTACCCCAACATCCTAAACCTGTGCAGGCACTTCCGGGCGCCGGATTCCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR CCA 90 bp CTTATGGGCTGGACCGACAGTCCTCCGGTTCCCAGCCCTCTGCGGTaGGACCGATTCCAGAGCTGCAGGTGTTCTCTGTTTACGCTCAGA +
Preference number: 1 (lower is better)
Translates to: LMGWTDSPPVPSPLR*DRFQSCRCSLFTLR
Trigger: TCTGAGCGTAAACAGAGAACACCTGCAGCTCTGGAATCGGTCCCACCGCAGAGGGCTGGGAACCGGAGGACTGTCGGTCCAGCCCATAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR TCA 90 bp CTACCACTGGGTGTGGCTGAACACAGGTCCTTAGTACAGATTCGGTaGCCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGAAGAGGGAGG +
Preference number: 1 (lower is better)
Translates to: LPLGVAEHRSLVQIR*PQGRGAGAFKGRGR
Trigger: CCTCCCTCTTCCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGACCTGTGTTCAGCCACACCCAGTGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR GCA 90 bp GCAGGTGTTCTCTGTTTACGCTCAGAGTGTACCGCCTCGGTCCCTTaGGATGTGAGTTGCGCGTGCGGTAGCTGGAAACACAGTTCTTCC +
Preference number: 1 (lower is better)
Translates to: AGVLCLRSECTASVP*DVSCACGSWKHSSS
Trigger: GGAAGAACTGTGTTTCCAGCTACCGCACGCGCAACTCACATCGCAAGGGACCGAGGCGGTACACTCTGAGCGTAAACAGAGAACACCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR TCA 90 bp TTCTCTGTTTACGCTCAGAGTGTACCGCCTCGGTCCCTTGCGATGTaGGTTGCGCGTGCGGTAGCTGGAAACACAGTTCTTCCAGGGTTG +
Preference number: 1 (lower is better)
Translates to: FSVYAQSVPPRSLAM*VARAVAGNTVLPGL
Trigger: CAACCCTGGAAGAACTGTGTTTCCAGCTACCGCACGCGCAACTCACATCGCAAGGGACCGAGGCGGTACACTCTGAGCGTAAACAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR CCA 90 bp ACAGACGCTGGCTGTGACGCTTTCTTGCTTATCAGCTCCTGTCGTTaGTGTGATCAGCAGTGTGGATGTAACCCGCTGTGTTGCCCGTCT +
Preference number: 1 (lower is better)
Translates to: TDAGCDAFLLISSCR*CDQQCGCNPLCCPS
Trigger: AGACGGGCAACACAGCGGGTTACATCCACACTGCTGATCACACCAACGACAGGAGCTGATAAGCAAGAAAGCGTCACAGCCAGCGTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR GCA 90 bp CACTTGTCAACCTTGGGTGAACAGACGCTGGCTGTGACGCTTTCTTaGTTATCAGCTCCTGTCGTTGGTGTGATCAGCAGTGTGGATGTA +
Preference number: 1 (lower is better)
Translates to: HLSTLGEQTLAVTLS*LSAPVVGVISSVDV
Trigger: TACATCCACACTGCTGATCACACCAACGACAGGAGCTGATAAGCAAGAAAGCGTCACAGCCAGCGTCTGTTCACCCAAGGTTGACAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR TCA 90 bp CTGGGGAGGGCAATGATGCTGCTGTTCTCTGTAATGCTTTGGGTATaGGCTCTGATCGGCGATTTTGCATTGTCCTTTGAGCCACGAAGA +
Preference number: 1 (lower is better)
Translates to: LGRAMMLLFSVMLWV*ALIGDFALSFEPRR
Trigger: TCTTCGTGGCTCAAAGGACAATGCAAAATCGCCGATCAGAGCTCATACCCAAAGCATTACAGAGAACAGCAGCATCATTGCCCTCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR TCA 90 bp AATGCTTTGGGTATGAGCTCTGATCGGCGATTTTGCATTGTCCTTTaGGCCACGAAGATAACACGGGTGACTGAGACTGCGCATGAGTCA +
Preference number: 1 (lower is better)
Translates to: NALGMSSDRRFCIVL*ATKITRVTETAHES
Trigger: TGACTCATGCGCAGTCTCAGTCACCCGTGTTATCTTCGTGGCTCAAAGGACAATGCAAAATCGCCGATCAGAGCTCATACCCAAAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR TCA 90 bp CGGCTAACAATCAACATTAGAGAAACTTCACTTGTCAACCTTGGGTaGACAGACGCTGGCTGTGACGCTTTCTTGCTTATCAGCTCCTGT +
Preference number: 1 (lower is better)
Translates to: RLTINIRETSLVNLG*TDAGCDAFLLISSC
Trigger: ACAGGAGCTGATAAGCAAGAAAGCGTCACAGCCAGCGTCTGTTCACCCAAGGTTGACAAGTGAAGTTTCTCTAATGTTGATTGTTAGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR TCA 90 bp GATTCTTTGTCCTCCCATATTTGTTCTACAGCAGACTTTGGTCTATaGCTTAAAAAGGTCAGTATCACTCTCTTCCTTTCCCCTTTGGGG +
Preference number: 1 (lower is better)
Translates to: DSLSSHICSTADFGL*LKKVSITLFLSPLG
Trigger: CCCCAAAGGGGAAAGGAAGAGAGTGATACTGACCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAACAAATATGGGAGGACAAAGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR TCA 90 bp AACCGTTCTGTCCGTTTTTCTTCTGACCGTGTTGGTATCCATCTGTaGGTTCAATCCACTCCATTACAATGTCTTTTATATGGAATCCTC +
Preference number: 1 (lower is better)
Translates to: NRSVRFSSDRVGIHL*VQSTPLQCLLYGIL
Trigger: GAGGATTCCATATAAAAGACATTGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAGAAAAACGGACAGAACGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR TCA 90 bp ACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGCAAGAATaGACCTTGAGTCAATACATCACCTCATCCTTTCCTTTCTCTTTG +
Preference number: 1 (lower is better)
Translates to: TISIPTLEDVQLQQE*TLSQYITSSFPFSL
Trigger: CAAAGAGAAAGGAAAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR TCA 90 bp GAGATCAGTTTAAATATACAAGAACCGTTCTGTCCGTTTTTCTTCTaGCCGTGTTGGTATCCATCTGTGAGTTCAATCCACTCCATTACA +
Preference number: 1 (lower is better)
Translates to: EISLNIQEPFCPFFF*PCWYPSVSSIHSIT
Trigger: TGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAGAAAAACGGACAGAACGGTTCTTGTATATTTAAACTGATCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR TCA 90 bp CTTGGAAAGGAAAACCAGGTAAGACTCCACCTTGTTGAGTTTACTTaGAAACCAGAGGAAGCTACAAGTCACATAATTTACAATAGATAT +
Preference number: 1 (lower is better)
Translates to: LGKENQVRLHLVEFT*KPEEATSHIIYNRY
Trigger: ATATCTATTGTAAATTATGTGACTTGTAGCTTCCTCTGGTTTTCAAGTAAACTCAACAAGGTGGAGTCTTACCTGGTTTTCCTTTCCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR TCA 90 bp ATTTACAATGCTTGGAAAGGAAAACCAGGTAAGACTCCACCTTGTTaGGTTTACTTGAAAACCAGAGGAAGCTACAAGTCACATAATTTA +
Preference number: 1 (lower is better)
Translates to: IYNAWKGKPGKTPPC*VYLKTRGSYKSHNL
Trigger: TAAATTATGTGACTTGTAGCTTCCTCTGGTTTTCAAGTAAACTCAACAAGGTGGAGTCTTACCTGGTTTTCCTTTCCAAGCATTGTAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR GCA 90 bp CAGTCCTCCGGTTCCCAGCCCTCTGCGGTGGGACCGATTCCAGAGCTGCAGGTGACCGCCTCGGTCCCTTaGGATGTGAGTTGCGCGTGC +
Preference number: 2 (lower is better)
Translates to: QSSGSQPSAVGPIPELQVTASVP*DVSCAC
Trigger: GCACGCGCAACTCACATCGCAAGGGACCGAGGCGGT...CACCTGCAGCTCTGGAATCGGTCCCACCGCAGAGGGCTGGGAACCGGAGGACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR-3UTR TCA 90 bp GCCTGCACAGGTTTAGGATGTTGGGGTAGTCTCGCTGAGGCCAGGGGAGAGCCTGTGTGGGGGAGACTGTaGGGGATCGGCGTGCGTGGT +
Preference number: 2 (lower is better)
Translates to: ACTGLGCWGSLAEARGEPVWGRL*GIGVRG
Trigger: ACCACGCACGCCGATCCCTCACAGTCTCCCCCACAC...AGGCTCTCCCCTGGCCTCAGCGAGACTACCCCAACATCCTAAACCTGTGCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR-3UTR GCA 90 bp AGCCCTCTGCGGTGGGACCGATTCCAGAGCTGCAGGTGTTCTCTGTTTACGCTCTGTGAGGGATCGGCGTaGGTGGTCTCCCGACCCAGC +
Preference number: 2 (lower is better)
Translates to: SPLRWDRFQSCRCSLFTLCEGSA*VVSRPS
Trigger: GCTGGGTCGGGAGACCACGCACGCCGATCCCTCACA...GAGCGTAAACAGAGAACACCTGCAGCTCTGGAATCGGTCCCACCGCAGAGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR-3UTR TCA 90 bp AGCCCTCTGCGGTGGGACCGATTCCAGAGCTGCAGGTGTTCTCTGTTTACGCTCCGGTCCCTTGCGATGTaGGTTGCGCGTGCGGTAGCT +
Preference number: 2 (lower is better)
Translates to: SPLRWDRFQSCRCSLFTLRSLAM*VARAVA
Trigger: AGCTACCGCACGCGCAACTCACATCGCAAGGGACCG...GAGCGTAAACAGAGAACACCTGCAGCTCTGGAATCGGTCCCACCGCAGAGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR-3UTR GCA 90 bp GTTATCCCGGAATCCGGCGCCCGGAAGTGCCTGCACAGGTTTAGGATGTTGGGGCCTTGCGATGTGAGTTaGGCGTGCGGTAGCTGGAAA +
Preference number: 2 (lower is better)
Translates to: VIPESGARKCLHRFRMLGPCDVS*ACGSWK
Trigger: TTTCCAGCTACCGCACGCGCAACTCACATCGCAAGG...CCCCAACATCCTAAACCTGTGCAGGCACTTCCGGGCGCCGGATTCCGGGATAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR-3UTR CCA 90 bp CCCTCTGCGGTGGGACCGATTCCAGAGCTGCAGGTGTTCTCTGTTTACGCTCAGTGCGCGTGCGGTAGCTaGAAACACAGTTCTTCCAGG +
Preference number: 2 (lower is better)
Translates to: PSAVGPIPELQVFSVYAQCACGS*KHSSSR
Trigger: CCTGGAAGAACTGTGTTTCCAGCTACCGCACGCGCA...CTGAGCGTAAACAGAGAACACCTGCAGCTCTGGAATCGGTCCCACCGCAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR-3UTR TCA 90 bp GTTATCCCGGAATCCGGCGCCCGGAAGTGCCTGCACAGGTTTAGGATGTTGGGGCTTCGGTACTTTTCTTaGGGTTTAGTCCCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: VIPESGARKCLHRFRMLGLRYFS*GLVPSS
Trigger: GCTGCTGGGGACTAAACCTCAAGAAAAGTACCGAAG...CCCCAACATCCTAAACCTGTGCAGGCACTTCCGGGCGCCGGATTCCGGGATAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR-3UTR GCA 90 bp AGCCCTCTGCGGTGGGACCGATTCCAGAGCTGCAGGTGTTCTCTGTTTACGCTCGATGTGAGTTGCGCGTaGGGTAGCTGGAAACACAGT +
Preference number: 2 (lower is better)
Translates to: SPLRWDRFQSCRCSLFTLDVSCA*GSWKHS
Trigger: ACTGTGTTTCCAGCTACCGCACGCGCAACTCACATC...GAGCGTAAACAGAGAACACCTGCAGCTCTGGAATCGGTCCCACCGCAGAGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR-3UTR CCA 90 bp AGTCTCGCTGAGGCCAGGGGAGAGCCTTCTTCGGTACTTTTCTTGAGGTTTAGTCCCAGCAGCCCCTTATaGGCTGGACCGACAGTCCTC +
Preference number: 2 (lower is better)
Translates to: SLAEARGEPSSVLFLRFSPSSPL*AGPTVL
Trigger: GAGGACTGTCGGTCCAGCCCATAAGGGGCTGCTGGG...ACTAAACCTCAAGAAAAGTACCGAAGAAGGCTCTCCCCTGGCCTCAGCGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR-3UTR GCA 90 bp CCCATAATGGTACCCAGACACTTTATCTCCACACACGGGACAAAGCTCTTCCAGGCGCCCGGAAGTGCCTaGACAGGTTTAGGATGTTGG +
Preference number: 2 (lower is better)
Translates to: PIMVPRHFISTHGTKLFQAPGSA*TGLGCW
Trigger: CCAACATCCTAAACCTGTGCAGGCACTTCCGGGCGC...CTGGAAGAGCTTTGTCCCGTGTGTGGAGATAAAGTGTCTGGGTACCATTATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR-3UTR TCA 90 bp TTGCTTATCAGCTCCTGTCGTTGGTGTGATCAGCAGTGTGGATGTAACCCGCTGTTAGTACAGATTCGGTaGCCACAGGGCAGAGGTGCT +
Preference number: 2 (lower is better)
Translates to: LLISSCRWCDQQCGCNPLLVQIR*PQGRGA
Trigger: AGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAA...CAGCGGGTTACATCCACACTGCTGATCACACCAACGACAGGAGCTGATAAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR TCA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGGTTGGTATCCATCTGTaGGTTCAATCCACTCCATTA +
Preference number: 2 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRVGIHL*VQSTPL
Trigger: TAATGGAGTGGATTGAACTCACAGATGGATACCAAC...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR GCA 90 bp AGTCTCGCTGAGGCCAGGGGAGAGCCTTCTTCGGTACTTTTCTTGAGGTTTAGTGGTTGCAGAGAAAAGTaGAACAGCGTCTCTTTCCCC +
Preference number: 2 (lower is better)
Translates to: SLAEARGEPSSVLFLRFSGCREK*NSVSFP
Trigger: GGGGAAAGAGACGCTGTTGCACTTTTCTCTGCAACC...ACTAAACCTCAAGAAAAGTACCGAAGAAGGCTCTCCCCTGGCCTCAGCGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR-3UTR GCA 90 bp TTTAAATTGAGACACGGCAAATTGACTGGAATTTTGTTATCCCGGAATCCGGCGCGGTTCCCAGCCCTCTaGGGTGGGACCGATTCCAGA +
Preference number: 2 (lower is better)
Translates to: FKLRHGKLTGILLSRNPARFPAL*GGTDSR
Trigger: TCTGGAATCGGTCCCACCGCAGAGGGCTGGGAACCG...CGCCGGATTCCGGGATAACAAAATTCCAGTCAATTTGCCGTGTCTCAATTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR-3UTR CCA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGTTATATGGAATCCTCTaGGGCTGTGAAGCCTTTGAT +
Preference number: 2 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRLYGIL*GCEAFD
Trigger: ATCAAAGGCTTCACAGCCCCAGAGGATTCCATATAA...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR CCA 90 bp TTGCTTATCAGCTCCTGTCGTTGGTGTGATCAGCAGTGTGGATGTAACCCGCTGAGGCTGTTCATGATTTaGTGGAGCTACCACTGGGTG +
Preference number: 2 (lower is better)
Translates to: LLISSCRWCDQQCGCNPLRLFMI*WSYHWV
Trigger: CACCCAGTGGTAGCTCCACCAAATCATGAACAGCCT...CAGCGGGTTACATCCACACTGCTGATCACACCAACGACAGGAGCTGATAAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR TCA 90 bp TTGCTTATCAGCTCCTGTCGTTGGTGTGATCAGCAGTGTGGATGTAACCCGCTGCGTTTCATTAACTGTTaGCCACACCATTCCTCTCCA +
Preference number: 2 (lower is better)
Translates to: LLISSCRWCDQQCGCNPLRFINC*PHHSSP
Trigger: TGGAGAGGAATGGTGTGGTCAACAGTTAATGAAACG...CAGCGGGTTACATCCACACTGCTGATCACACCAACGACAGGAGCTGATAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR CCA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGCTGTTCATGATTTGGTaGAGCTACCACTGGGTGTGG +
Preference number: 2 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMLFMIW*SYHWVW
Trigger: CCACACCCAGTGGTAGCTCCACCAAATCATGAACAG...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR CCA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGAGGCTGTTCATGATTTaGTGGAGCTACCACTGGGTG +
Preference number: 2 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMRLFMI*WSYHWV
Trigger: CACCCAGTGGTAGCTCCACCAAATCATGAACAGCCT...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR GCA 90 bp ACACATGTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGACCACAGGGCAGAGGTaGTGGGGCCTTCAAAGGAAG +
Preference number: 2 (lower is better)
Translates to: THVKITISIPTLEDVQLQTTGQR*WGLQRK
Trigger: CTTCCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGT...CTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTACATGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR TCA 90 bp AAGATAACACGGGTGACTGAGACTGCGCATGAGTCAACGCCCAGCTTACCTAATAACACTTACATAAGATaGGGGATACTGCCTGCATTT +
Preference number: 2 (lower is better)
Translates to: KITRVTETAHESTPSLPNNTYIR*GILPAF
Trigger: AAATGCAGGCAGTATCCCTCATCTTATGTAAGTGTT...ATTAGGTAAGCTGGGCGTTGACTCATGCGCAGTCTCAGTCACCCGTGTTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR TCA 90 bp AAGATAACACGGGTGACTGAGACTGCGCATGAGTCAACGCCCAGCTTACCTAATCTTGTTGAGTTTACTTaGAAACCAGAGGAAGCTACA +
Preference number: 2 (lower is better)
Translates to: KITRVTETAHESTPSLPNLVEFT*KPEEAT
Trigger: TGTAGCTTCCTCTGGTTTTCAAGTAAACTCAACAAG...ATTAGGTAAGCTGGGCGTTGACTCATGCGCAGTCTCAGTCACCCGTGTTATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR CCA 90 bp GTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGCAAGAATGGTGGAGCTACCACTaGGTGTGGCTGAACACAGGT +
Preference number: 2 (lower is better)
Translates to: VKITISIPTLEDVQLQQEWWSYH*VWLNTG
Trigger: ACCTGTGTTCAGCCACACCCAGTGGTAGCTCCACCA...TTCTTGCTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR CCA 90 bp CCCATAATGGTACCCAGACACTTTATCTCCACACACGGGACAAAGCTCTTCCAGACACGGCAAATTGACTaGAATTTTGTTATCCCGGAA +
Preference number: 2 (lower is better)
Translates to: PIMVPRHFISTHGTKLFQTRQID*NFVIPE
Trigger: TTCCGGGATAACAAAATTCCAGTCAATTTGCCGTGT...CTGGAAGAGCTTTGTCCCGTGTGTGGAGATAAAGTGTCTGGGTACCATTATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR-3UTR TCA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGCAGCTGATGCATTCTTaGGAATTGTTTCAGTTCAGC +
Preference number: 2 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMQLMHS*ELFQFS
Trigger: GCTGAACTGAAACAATTCTCAAGAATGCATCAGCTG...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR TCA 90 bp GTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGCAAGAAACCACTGGGTGTGGCTaGACACAGGTCCTTAGTACA +
Preference number: 2 (lower is better)
Translates to: VKITISIPTLEDVQLQQETTGCG*TQVLST
Trigger: TGTACTAAGGACCTGTGTTCAGCCACACCCAGTGGT...TTCTTGCTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR TCA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGAAATTAGGCTGTTCATaGTTTGGTGGAGCTACCACT +
Preference number: 2 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMKLGCS*FGGATT
Trigger: AGTGGTAGCTCCACCAAATCATGAACAGCCTAATTT...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR CCA 90 bp AAATGCCAGGTTACAAATCGGCTAACAATCAACATTAGAGAAACTTCACTTGTCTGGTGGAGCTACCACTaGGTGTGGCTGAACACAGGT +
Preference number: 2 (lower is better)
Translates to: KCQVTNRLTINIRETSLVWWSYH*VWLNTG
Trigger: ACCTGTGTTCAGCCACACCCAGTGGTAGCTCCACCA...GACAAGTGAAGTTTCTCTAATGTTGATTGTTAGCCGATTTGTAACCTGGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR CCA 90 bp GGATGTTCAATTGCAGCAAGAATGAACCTTGAGTCAATACATCACCTCATCCTTAGGCTGTTCATGATTTaGTGGAGCTACCACTGGGTG +
Preference number: 2 (lower is better)
Translates to: GCSIAARMNLESIHHLILRLFMI*WSYHWV
Trigger: CACCCAGTGGTAGCTCCACCAAATCATGAACAGCCT...AAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR TCA 90 bp TTTGTTCTACAGCAGACTTTGGTCTATGACTTAAAAAGGTCAGTATCACTCTCTACCACTGGGTGTGGCTaGACACAGGTCCTTAGTACA +
Preference number: 2 (lower is better)
Translates to: FVLQQTLVYDLKRSVSLSTTGCG*TQVLST
Trigger: TGTACTAAGGACCTGTGTTCAGCCACACCCAGTGGT...AGAGAGTGATACTGACCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR TCA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGAAGACTCCACCTTGTTaGGTTTACTTGAAAACCAGA +
Preference number: 2 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMKTPPC*VYLKTR
Trigger: TCTGGTTTTCAAGTAAACTCAACAAGGTGGAGTCTT...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR CCA 90 bp CTTCTGACCGTGTTGGTATCCATCTGTGAGTTCAATCCACTCCATTACAATGTCTTATATGGAATCCTCTaGGGCTGTGAAGCCTTTGAT +
Preference number: 2 (lower is better)
Translates to: LLTVLVSICEFNPLHYNVLYGIL*GCEAFD
Trigger: ATCAAAGGCTTCACAGCCCCAGAGGATTCCATATAA...GACATTGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR CCA 90 bp TTGTCTCCATCCACATTACACATGCATGATAGAACCGTTTCATTAACTGTTGACCTGTTCATGATTTGGTaGAGCTACCACTGGGTGTGG +
Preference number: 2 (lower is better)
Translates to: LSPSTLHMHDRTVSLTVDLFMIW*SYHWVW
Trigger: CCACACCCAGTGGTAGCTCCACCAAATCATGAACAG...GTCAACAGTTAATGAAACGGTTCTATCATGCATGTGTAATGTGGATGGAGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR TCA 90 bp CATGATAGAACCGTTTCATTAACTGTTGACCACACCATTCCTCTCCATGTATCTTGTCCGTTTTTCTTCTaGCCGTGTTGGTATCCATCT +
Preference number: 2 (lower is better)
Translates to: HDRTVSLTVDHTIPLHVSCPFFF*PCWYPS
Trigger: AGATGGATACCAACACGGTCAGAAGAAAAACGGACA...AGATACATGGAGAGGAATGGTGTGGTCAACAGTTAATGAAACGGTTCTATCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR TCA 90 bp TCCTTTCCTTTCTCTTTGCATAGATTAACATGCGTCAATTTTGTTTCCAACTACTTAGTACAGATTCGGTaGCCACAGGGCAGAGGTGCT +
Preference number: 2 (lower is better)
Translates to: SFPFSLHRLTCVNFVSNYLVQIR*PQGRGA
Trigger: AGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAA...GTAGTTGGAAACAAAATTGACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR TCA 90 bp AAACCTTTATATTTGAGTCTGCTTTTACCGGCAAATCCTGTAATTGATAAGGCAACCACTGGGTGTGGCTaGACACAGGTCCTTAGTACA +
Preference number: 2 (lower is better)
Translates to: KPLYLSLLLPANPVIDKATTGCG*TQVLST
Trigger: TGTACTAAGGACCTGTGTTCAGCCACACCCAGTGGT...TGCCTTATCAATTACAGGATTTGCCGGTAAAAGCAGACTCAAATATAAAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR TCA 90 bp AAATGCCAGGTTACAAATCGGCTAACAATCAACATTAGAGAAACTTCACTTGTCAACAGACGCTGGCTGTaGCGCTTTCTTGCTTATCAG +
Preference number: 2 (lower is better)
Translates to: KCQVTNRLTINIRETSLVNRRWL*RFLAYQ
Trigger: CTGATAAGCAAGAAAGCGTCACAGCCAGCGTCTGTT...GACAAGTGAAGTTTCTCTAATGTTGATTGTTAGCCGATTTGTAACCTGGCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR TCA 90 bp CATGATAGAACCGTTTCATTAACTGTTGACCACACCATTCCTCTCCATGTATCTCAGCTGATGCATTCTTaGGAATTGTTTCAGTTCAGC +
Preference number: 2 (lower is better)
Translates to: HDRTVSLTVDHTIPLHVSQLMHS*ELFQFS
Trigger: GCTGAACTGAAACAATTCTCAAGAATGCATCAGCTG...AGATACATGGAGAGGAATGGTGTGGTCAACAGTTAATGAAACGGTTCTATCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR TCA 90 bp GGATGTTCAATTGCAGCAAGAATGAACCTTGAGTCAATACATCACCTCATCCTTAAATTAGGCTGTTCATaGTTTGGTGGAGCTACCACT +
Preference number: 2 (lower is better)
Translates to: GCSIAARMNLESIHHLILKLGCS*FGGATT
Trigger: AGTGGTAGCTCCACCAAATCATGAACAGCCTAATTT...AAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR CAA 90 bp GAATTTGCGATTCTTTGTCCTCCCATATTTGTTCTACAGCAGACTTaGGTCTATGACTTAAAAAGGTCAGTATCACTCTCTTCCTTTCCC +
Preference number: 2 (lower is better)
Translates to: EFAILCPPIFVLQQT*VYDLKRSVSLSSFP
Trigger: GGGAAAGGAAGAGAGTGATACTGACCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAACAAATATGGGAGGACAAAGAATCGCAAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR GCA 90 bp AAACCTTTATATTTGAGTCTGCTTTTACCGGCAAATCCTGTAATTGATAAGGCAGCTGTGACGCTTTCTTaGTTATCAGCTCCTGTCGTT +
Preference number: 2 (lower is better)
Translates to: KPLYLSLLLPANPVIDKAAVTLS*LSAPVV
Trigger: AACGACAGGAGCTGATAAGCAAGAAAGCGTCACAGC...TGCCTTATCAATTACAGGATTTGCCGGTAAAAGCAGACTCAAATATAAAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR TCA 90 bp AAATGCCAGGTTACAAATCGGCTAACAATCAACATTAGAGAAACTTCACTTGTCGTTGGTATCCATCTGTaGGTTCAATCCACTCCATTA +
Preference number: 2 (lower is better)
Translates to: KCQVTNRLTINIRETSLVVGIHL*VQSTPL
Trigger: TAATGGAGTGGATTGAACTCACAGATGGATACCAAC...GACAAGTGAAGTTTCTCTAATGTTGATTGTTAGCCGATTTGTAACCTGGCATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR TCA 90 bp TCCTTTCCTTTCTCTTTGCATAGATTAACATGCGTCAATTTTGTTTCCAACTACTGTCCGTTTTTCTTCTaGCCGTGTTGGTATCCATCT +
Preference number: 2 (lower is better)
Translates to: SFPFSLHRLTCVNFVSNYCPFFF*PCWYPS
Trigger: AGATGGATACCAACACGGTCAGAAGAAAAACGGACA...GTAGTTGGAAACAAAATTGACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR TCA 90 bp ACACATGTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGAACACTTACATAAGATaGGGGATACTGCCTGCATTT +
Preference number: 2 (lower is better)
Translates to: THVKITISIPTLEDVQLQNTYIR*GILPAF
Trigger: AAATGCAGGCAGTATCCCTCATCTTATGTAAGTGTT...CTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTACATGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR TCA 90 bp TTGTCTCCATCCACATTACACATGCATGATAGAACCGTTTCATTAACTGTTGACGCAGACTTTGGTCTATaGCTTAAAAAGGTCAGTATC +
Preference number: 2 (lower is better)
Translates to: LSPSTLHMHDRTVSLTVDADFGL*LKKVSI
Trigger: GATACTGACCTTTTTAAGTCATAGACCAAAGTCTGC...GTCAACAGTTAATGAAACGGTTCTATCATGCATGTGTAATGTGGATGGAGACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR TCA 90 bp AAACCTTTATATTTGAGTCTGCTTTTACCGGCAAATCCTGTAATTGATAAGGCAGTAATGCTTTGGGTATaGGCTCTGATCGGCGATTTT +
Preference number: 2 (lower is better)
Translates to: KPLYLSLLLPANPVIDKAVMLWV*ALIGDF
Trigger: AAAATCGCCGATCAGAGCTCATACCCAAAGCATTAC...TGCCTTATCAATTACAGGATTTGCCGGTAAAAGCAGACTCAAATATAAAGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR GCA 90 bp GTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGCAAGAATTCCTATTAGCTGTTTaGAGGTCTAAGACACAGACA +
Preference number: 2 (lower is better)
Translates to: VKITISIPTLEDVQLQQEFLLAV*RSKTQT
Trigger: TGTCTGTGTCTTAGACCTGCAAACAGCTAATAGGAA...TTCTTGCTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR GCA 90 bp ACACATGTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGTTCCTATTAGCTGTTTaGAGGTCTAAGACACAGACA +
Preference number: 2 (lower is better)
Translates to: THVKITISIPTLEDVQLQFLLAV*RSKTQT
Trigger: TGTCTGTGTCTTAGACCTGCAAACAGCTAATAGGAA...CTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTACATGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR CCA 90 bp CATGATAGAACCGTTTCATTAACTGTTGACCACACCATTCCTCTCCATGTATCTTCTTCCTTTCCCCTTTaGGGAAGATTTGAATTACTT +
Preference number: 2 (lower is better)
Translates to: HDRTVSLTVDHTIPLHVSSSFPL*GRFELL
Trigger: AAGTAATTCAAATCTTCCCCAAAGGGGAAAGGAAGA...AGATACATGGAGAGGAATGGTGTGGTCAACAGTTAATGAAACGGTTCTATCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR CAA 90 bp TTTAAATATACAAGAACCGTTCTGTCCGTTTTTCTTCTGACCGTGTaGGTATCCATCTGTGAGTTCAATCCACTCCATTACAATGTCTTT +
Preference number: 2 (lower is better)
Translates to: FKYTRTVLSVFLLTV*VSICEFNPLHYNVF
Trigger: AAAGACATTGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAGAAAAACGGACAGAACGGTTCTTGTATATTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR TCA 90 bp TCCTTTCCTTTCTCTTTGCATAGATTAACATGCGTCAATTTTGTTTCCAACTACGTTGGTATCCATCTGTaGGTTCAATCCACTCCATTA +
Preference number: 2 (lower is better)
Translates to: SFPFSLHRLTCVNFVSNYVGIHL*VQSTPL
Trigger: TAATGGAGTGGATTGAACTCACAGATGGATACCAAC...GTAGTTGGAAACAAAATTGACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR TCA 90 bp TTGTCTCCATCCACATTACACATGCATGATAGAACCGTTTCATTAACTGTTGACTATTGTAGGTACAGCTaGTGCATTCTTGAGAATTGT +
Preference number: 2 (lower is better)
Translates to: LSPSTLHMHDRTVSLTVDYCRYS*CILENC
Trigger: ACAATTCTCAAGAATGCATCAGCTGTACCTACAATA...GTCAACAGTTAATGAAACGGTTCTATCATGCATGTGTAATGTGGATGGAGACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR TCA 90 bp TCCTTTCCTTTCTCTTTGCATAGATTAACATGCGTCAATTTTGTTTCCAACTACAAATTAGGCTGTTCATaGTTTGGTGGAGCTACCACT +
Preference number: 2 (lower is better)
Translates to: SFPFSLHRLTCVNFVSNYKLGCS*FGGATT
Trigger: AGTGGTAGCTCCACCAAATCATGAACAGCCTAATTT...GTAGTTGGAAACAAAATTGACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR GCA 90 bp ACACATGTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGTATGAAATCCAACAATaGCAAAGCCACATTTCAGCA +
Preference number: 2 (lower is better)
Translates to: THVKITISIPTLEDVQLQYEIQQ*QSHISA
Trigger: TGCTGAAATGTGGCTTTGGCATTGTTGGATTTCATA...CTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTACATGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR GCA 90 bp CATGATAGAACCGTTTCATTAACTGTTGACCACACCATTCCTCTCCATGTATCTGTATACAATTTACAATaGTTGGAAAGGAAAACCAGG +
Preference number: 2 (lower is better)
Translates to: HDRTVSLTVDHTIPLHVSVYNLQ*LERKTR
Trigger: CCTGGTTTTCCTTTCCAAGCATTGTAAATTGTATAC...AGATACATGGAGAGGAATGGTGTGGTCAACAGTTAATGAAACGGTTCTATCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR CCA 90 bp AAACCTTTATATTTGAGTCTGCTTTTACCGGCAAATCCTGTAATTGATAAGGCATTATATGGAATCCTCTaGGGCTGTGAAGCCTTTGAT +
Preference number: 2 (lower is better)
Translates to: KPLYLSLLLPANPVIDKALYGIL*GCEAFD
Trigger: ATCAAAGGCTTCACAGCCCCAGAGGATTCCATATAA...TGCCTTATCAATTACAGGATTTGCCGGTAAAAGCAGACTCAAATATAAAGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR TCA 90 bp AAATGCCAGGTTACAAATCGGCTAACAATCAACATTAGAGAAACTTCACTTGTCTATTGTAGGTACAGCTaGTGCATTCTTGAGAATTGT +
Preference number: 2 (lower is better)
Translates to: KCQVTNRLTINIRETSLVYCRYS*CILENC
Trigger: ACAATTCTCAAGAATGCATCAGCTGTACCTACAATA...GACAAGTGAAGTTTCTCTAATGTTGATTGTTAGCCGATTTGTAACCTGGCATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR TCA 90 bp AAATGCCAGGTTACAAATCGGCTAACAATCAACATTAGAGAAACTTCACTTGTCAGAACTGTGACTATTTaGCATCCTAGCAAAATGTGT +
Preference number: 2 (lower is better)
Translates to: KCQVTNRLTINIRETSLVRTVTI*HPSKMC
Trigger: ACACATTTTGCTAGGATGTCAAATAGTCACAGTTCT...GACAAGTGAAGTTTCTCTAATGTTGATTGTTAGCCGATTTGTAACCTGGCATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR TCA 90 bp TTTGTTCTACAGCAGACTTTGGTCTATGACTTAAAAAGGTCAGTATCACTCTCTAACTACTTAGAACTGTaGCTATTTGACATCCTAGCA +
Preference number: 2 (lower is better)
Translates to: FVLQQTLVYDLKRSVSLSNYLEL*LFDILA
Trigger: TGCTAGGATGTCAAATAGTCACAGTTCTAAGTAGTT...AGAGAGTGATACTGACCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR GCA 90 bp TCCTTTCCTTTCTCTTTGCATAGATTAACATGCGTCAATTTTGTTTCCAACTACTTCCTATTAGCTGTTTaGAGGTCTAAGACACAGACA +
Preference number: 2 (lower is better)
Translates to: SFPFSLHRLTCVNFVSNYFLLAV*RSKTQT
Trigger: TGTCTGTGTCTTAGACCTGCAAACAGCTAATAGGAA...GTAGTTGGAAACAAAATTGACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR CCA 90 bp TTGTCTCCATCCACATTACACATGCATGATAGAACCGTTTCATTAACTGTTGACTTAATTAGCGTTACTTaGAGCAGTTCAGAGTACTTT +
Preference number: 2 (lower is better)
Translates to: LSPSTLHMHDRTVSLTVDLISVT*SSSEYF
Trigger: AAAGTACTCTGAACTGCTCCAAGTAACGCTAATTAA...GTCAACAGTTAATGAAACGGTTCTATCATGCATGTGTAATGTGGATGGAGACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR CAA 90 bp TTCATACCTGTGGCATCGCATGTTAATAATACTGATAATAGTCATTaGAAGAATTTGCGATTCTTTGTCCTCCCATATTTGTTCTACAGC +
Preference number: 2 (lower is better)
Translates to: FIPVASHVNNTDNSH*KNLRFFVLPYLFYS
Trigger: GCTGTAGAACAAATATGGGAGGACAAAGAATCGCAAATTCTTCAAATGACTATTATCAGTATTATTAACATGCGATGCCACAGGTATGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR GCA 90 bp AAACCTTTATATTTGAGTCTGCTTTTACCGGCAAATCCTGTAATTGATAAGGCACATCCACATTACACATaGATGATAGAACCGTTTCAT +
Preference number: 2 (lower is better)
Translates to: KPLYLSLLLPANPVIDKAHPHYT*MIEPFH
Trigger: ATGAAACGGTTCTATCATGCATGTGTAATGTGGATG...TGCCTTATCAATTACAGGATTTGCCGGTAAAAGCAGACTCAAATATAAAGGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR CCA 90 bp TTTGTTCTACAGCAGACTTTGGTCTATGACTTAAAAAGGTCAGTATCACTCTCTTTAATTAGCGTTACTTaGAGCAGTTCAGAGTACTTT +
Preference number: 2 (lower is better)
Translates to: FVLQQTLVYDLKRSVSLSLISVT*SSSEYF
Trigger: AAAGTACTCTGAACTGCTCCAAGTAACGCTAATTAA...AGAGAGTGATACTGACCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAACAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR GCA 72 bp TGGGCTGGACCGACAGTCCTCCGGTTCCCAGCCCTCTaGGGTGGGACCGATTCCAGAGCTGCAGGTGTTCTC +
Preference number: 3 (lower is better)
Translates to: WAGPTVLRFPAL*GGTDSRAAGVL
Trigger: GAGAACACCTGCAGCTCTGGAATCGGTCCCACCGCAGAGGGCTGGGAACCGGAGGACTGTCGGTCCAGCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR-3UTR CAA 90 bp CCTCCGGTTCCCAGCCCTCTGCGGTGGGACCGATTCCAGAGCTGCAGGTGTTCTTACCGCCTCGGTCCCTaGCGATGTGAGTTGCGCGTG +
Preference number: 3 (lower is better)
Translates to: PPVPSPLRWDRFQSCRCSYRLGP*RCELRV
Trigger: CACGCGCAACTCACATCGCAAGGGACCGAGGCGGTA...AGAACACCTGCAGCTCTGGAATCGGTCCCACCGCAGAGGGCTGGGAACCGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR CCA 72 bp CCGGCGCCCGGAAGTGCCTGCACAGGTTTAGGATGTTaGGGTAGTCTCGCTGAGGCCAGGGGAGAGCCTTCT +
Preference number: 3 (lower is better)
Translates to: PAPGSACTGLGC*GSLAEARGEPS
Trigger: AGAAGGCTCTCCCCTGGCCTCAGCGAGACTACCCCAACATCCTAAACCTGTGCAGGCACTTCCGGGCGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR CCA 72 bp TTCTTGAGGTTTAGTCCCCAGCAGCCCCTTATGGGCTaGACCGACAGTCCTCCGGTTCCCAGCCCTCTGCGG +
Preference number: 3 (lower is better)
Translates to: FLRFSPQQPLMG*TDSPPVPSPLR
Trigger: CCGCAGAGGGCTGGGAACCGGAGGACTGTCGGTCCAGCCCATAAGGGGCTGCTGGGGACTAAACCTCAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR CCA 72 bp TGGACCGACAGTCCTCCGGTTCCCAGCCCTCTGCGGTaGGACCGATTCCAGAGCTGCAGGTGTTCTCTGTTT +
Preference number: 3 (lower is better)
Translates to: WTDSPPVPSPLR*DRFQSCRCSLF
Trigger: AAACAGAGAACACCTGCAGCTCTGGAATCGGTCCCACCGCAGAGGGCTGGGAACCGGAGGACTGTCGGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR GCA 72 bp GTTCCCAGCCCTCTGCGGTGGGACCGATTCCAGAGCTaGAGGTGTTCTCTGTTTACGCTCAGAGTGTACCGC +
Preference number: 3 (lower is better)
Translates to: VPSPLRWDRFQS*RCSLFTLRVYR
Trigger: GCGGTACACTCTGAGCGTAAACAGAGAACACCTGCAGCTCTGGAATCGGTCCCACCGCAGAGGGCTGGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR GCA 72 bp TGTACCGCCTCGGTCCCTTGCGATGTGAGTTGCGCGTaGGGTAGCTGGAAACACAGTTCTTCCAGGGTTGCA +
Preference number: 3 (lower is better)
Translates to: CTASVPCDVSCA*GSWKHSSSRVA
Trigger: TGCAACCCTGGAAGAACTGTGTTTCCAGCTACCGCACGCGCAACTCACATCGCAAGGGACCGAGGCGGTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR GCA 72 bp TCAGAGTGTACCGCCTCGGTCCCTTGCGATGTGAGTTaGGCGTGCGGTAGCTGGAAACACAGTTCTTCCAGG +
Preference number: 3 (lower is better)
Translates to: SECTASVPCDVS*ACGSWKHSSSR
Trigger: CCTGGAAGAACTGTGTTTCCAGCTACCGCACGCGCAACTCACATCGCAAGGGACCGAGGCGGTACACTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR GCA 72 bp CTCTGTTTACGCTCAGAGTGTACCGCCTCGGTCCCTTaGGATGTGAGTTGCGCGTGCGGTAGCTGGAAACAC +
Preference number: 3 (lower is better)
Translates to: LCLRSECTASVP*DVSCACGSWKH
Trigger: GTGTTTCCAGCTACCGCACGCGCAACTCACATCGCAAGGGACCGAGGCGGTACACTCTGAGCGTAAACAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR TCA 72 bp GGTGTGGCTGAACACAGGTCCTTAGTACAGATTCGGTaGCCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGA +
Preference number: 3 (lower is better)
Translates to: GVAEHRSLVQIR*PQGRGAGAFKG
Trigger: TCCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGACCTGTGTTCAGCCACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR TCA 72 bp TACGCTCAGAGTGTACCGCCTCGGTCCCTTGCGATGTaGGTTGCGCGTGCGGTAGCTGGAAACACAGTTCTT +
Preference number: 3 (lower is better)
Translates to: YAQSVPPRSLAM*VARAVAGNTVL
Trigger: AAGAACTGTGTTTCCAGCTACCGCACGCGCAACTCACATCGCAAGGGACCGAGGCGGTACACTCTGAGCGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR-3UTR CAA 90 bp GTTATCCCGGAATCCGGCGCCCGGAAGTGCCTGCACAGGTTTAGGATGTTGGGGACAGTTCTTCCAGGGTaGCAGAGAAAAGTGCAACAG +
Preference number: 3 (lower is better)
Translates to: VIPESGARKCLHRFRMLGTVLPG*QRKVQQ
Trigger: CTGTTGCACTTTTCTCTGCAACCCTGGAAGAACTGT...CCCCAACATCCTAAACCTGTGCAGGCACTTCCGGGCGCCGGATTCCGGGATAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR GCA 72 bp ATTTTGTTATCCCGGAATCCGGCGCCCGGAAGTGCCTaGACAGGTTTAGGATGTTGGGGTAGTCTCGCTGAG +
Preference number: 3 (lower is better)
Translates to: ILLSRNPAPGSA*TGLGCWGSLAE
Trigger: CTCAGCGAGACTACCCCAACATCCTAAACCTGTGCAGGCACTTCCGGGCGCCGGATTCCGGGATAACAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR GCA 72 bp ACCTTGGGTGAACAGACGCTGGCTGTGACGCTTTCTTaGTTATCAGCTCCTGTCGTTGGTGTGATCAGCAGT +
Preference number: 3 (lower is better)
Translates to: TLGEQTLAVTLS*LSAPVVGVISS
Trigger: ACTGCTGATCACACCAACGACAGGAGCTGATAAGCAAGAAAGCGTCACAGCCAGCGTCTGTTCACCCAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR CCA 72 bp GGCTGTGACGCTTTCTTGCTTATCAGCTCCTGTCGTTaGTGTGATCAGCAGTGTGGATGTAACCCGCTGTGT +
Preference number: 3 (lower is better)
Translates to: GCDAFLLISSCR*CDQQCGCNPLC
Trigger: ACACAGCGGGTTACATCCACACTGCTGATCACACCAACGACAGGAGCTGATAAGCAAGAAAGCGTCACAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR TCA 72 bp GGTATGAGCTCTGATCGGCGATTTTGCATTGTCCTTTaGGCCACGAAGATAACACGGGTGACTGAGACTGCG +
Preference number: 3 (lower is better)
Translates to: GMSSDRRFCIVL*ATKITRVTETA
Trigger: CGCAGTCTCAGTCACCCGTGTTATCTTCGTGGCTCAAAGGACAATGCAAAATCGCCGATCAGAGCTCATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR CAA 90 bp TTGCTTATCAGCTCCTGTCGTTGGTGTGATCAGCAGTGTGGATGTAACCCGCTGATTTTGCATTGTCCTTaGAGCCACGAAGATAACACG +
Preference number: 3 (lower is better)
Translates to: LLISSCRWCDQQCGCNPLILHCP*SHEDNT
Trigger: CGTGTTATCTTCGTGGCTCAAAGGACAATGCAAAAT...CAGCGGGTTACATCCACACTGCTGATCACACCAACGACAGGAGCTGATAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR CAA 90 bp TTGCTTATCAGCTCCTGTCGTTGGTGTGATCAGCAGTGTGGATGTAACCCGCTGTCCTTTCCTTTCTCTTaGCATAGATTAACATGCGTC +
Preference number: 3 (lower is better)
Translates to: LLISSCRWCDQQCGCNPLSFPFS*HRLTCV
Trigger: GACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA...CAGCGGGTTACATCCACACTGCTGATCACACCAACGACAGGAGCTGATAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR CAA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGATCGGCGATTTTGCATaGTCCTTTGAGCCACGAAGA +
Preference number: 3 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMIGDFA*SFEPRR
Trigger: TCTTCGTGGCTCAAAGGACAATGCAAAATCGCCGAT...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR CAA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGTTTCTTCTGACCGTGTaGGTATCCATCTGTGAGTTC +
Preference number: 3 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMFLLTV*VSICEF
Trigger: GAACTCACAGATGGATACCAACACGGTCAGAAGAAA...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR TCA 72 bp GCAATGATGCTGCTGTTCTCTGTAATGCTTTGGGTATaGGCTCTGATCGGCGATTTTGCATTGTCCTTTGAG +
Preference number: 3 (lower is better)
Translates to: AMMLLFSVMLWV*ALIGDFALSFE
Trigger: CTCAAAGGACAATGCAAAATCGCCGATCAGAGCTCATACCCAAAGCATTACAGAGAACAGCAGCATCATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR TCA 72 bp TGGTGTTGGACATTATATTTTTCAGGTAGCAATGTGTaGGCAAACCTTGCAGCTTTCACAGGTGAGGAGCCC +
Preference number: 3 (lower is better)
Translates to: WCWTLYFSGSNV*ANLAAFTGEEP
Trigger: GGGCTCCTCACCTGTGAAAGCTGCAAGGTTTGCTCACACATTGCTACCTGAAAAATATAATGTCCAACACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474307.1
3UTR-3UTR CAA 90 bp AAGATAACACGGGTGACTGAGACTGCGCATGAGTCAACGCCCAGCTTACCTAATAGAATTTGCGATTCTTaGTCCTCCCATATTTGTTCT +
Preference number: 3 (lower is better)
Translates to: KITRVTETAHESTPSLPNRICDS*SSHICS
Trigger: AGAACAAATATGGGAGGACAAAGAATCGCAAATTCT...ATTAGGTAAGCTGGGCGTTGACTCATGCGCAGTCTCAGTCACCCGTGTTATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR TCA 72 bp ATCAACATTAGAGAAACTTCACTTGTCAACCTTGGGTaGACAGACGCTGGCTGTGACGCTTTCTTGCTTATC +
Preference number: 3 (lower is better)
Translates to: INIRETSLVNLG*TDAGCDAFLLI
Trigger: GATAAGCAAGAAAGCGTCACAGCCAGCGTCTGTTCACCCAAGGTTGACAAGTGAAGTTTCTCTAATGTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR CAA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGTCCTTTCCTTTCTCTTaGCATAGATTAACATGCGTC +
Preference number: 3 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMSFPFS*HRLTCV
Trigger: GACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR TCA 72 bp GCTTGGAAAGGAAAACCAGGTAAGACTCCACCTTGTTaGGTTTACTTGAAAACCAGAGGAAGCTACAAGTCA +
Preference number: 3 (lower is better)
Translates to: AWKGKPGKTPPC*VYLKTRGSYKS
Trigger: TGACTTGTAGCTTCCTCTGGTTTTCAAGTAAACTCAACAAGGTGGAGTCTTACCTGGTTTTCCTTTCCAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR CCA 72 bp TGCATTCTTGAGAATTGTTTCAGTTCAGCTTTACCATaGAGGAATCCTGTAAGCTCAAATCCCCCGCTGTAT +
Preference number: 3 (lower is better)
Translates to: CILENCFSSALP*RNPVSSNPPLY
Trigger: ATACAGCGGGGGATTTGAGCTTACAGGATTCCTCCATGGTAAAGCTGAACTGAAACAATTCTCAAGAATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR CAA 90 bp TTGTCTCCATCCACATTACACATGCATGATAGAACCGTTTCATTAACTGTTGACATCGGCGATTTTGCATaGTCCTTTGAGCCACGAAGA +
Preference number: 3 (lower is better)
Translates to: LSPSTLHMHDRTVSLTVDIGDFA*SFEPRR
Trigger: TCTTCGTGGCTCAAAGGACAATGCAAAATCGCCGAT...GTCAACAGTTAATGAAACGGTTCTATCATGCATGTGTAATGTGGATGGAGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR TCA 72 bp ATCCCAACTCTTGAGGATGTTCAATTGCAGCAAGAATaGACCTTGAGTCAATACATCACCTCATCCTTTCCT +
Preference number: 3 (lower is better)
Translates to: IPTLEDVQLQQE*TLSQYITSSFP
Trigger: AGGAAAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCCTCAAGAGTTGGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR CAA 90 bp TTTGTTCTACAGCAGACTTTGGTCTATGACTTAAAAAGGTCAGTATCACTCTCTGGGGCTGTGAAGCCTTaGATTCACAGTTTGCAATAC +
Preference number: 3 (lower is better)
Translates to: FVLQQTLVYDLKRSVSLSGAVKP*IHSLQY
Trigger: GTATTGCAAACTGTGAATCAAAGGCTTCACAGCCCC...AGAGAGTGATACTGACCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR CAA 90 bp AAATGCCAGGTTACAAATCGGCTAACAATCAACATTAGAGAAACTTCACTTGTCGGGGCTGTGAAGCCTTaGATTCACAGTTTGCAATAC +
Preference number: 3 (lower is better)
Translates to: KCQVTNRLTINIRETSLVGAVKP*IHSLQY
Trigger: GTATTGCAAACTGTGAATCAAAGGCTTCACAGCCCC...GACAAGTGAAGTTTCTCTAATGTTGATTGTTAGCCGATTTGTAACCTGGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR CAA 90 bp GTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGCAAGAATTTCTTCTGACCGTGTaGGTATCCATCTGTGAGTTC +
Preference number: 3 (lower is better)
Translates to: VKITISIPTLEDVQLQQEFLLTV*VSICEF
Trigger: GAACTCACAGATGGATACCAACACGGTCAGAAGAAA...TTCTTGCTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR CAA 90 bp TCCTTTCCTTTCTCTTTGCATAGATTAACATGCGTCAATTTTGTTTCCAACTACGGGGCTGTGAAGCCTTaGATTCACAGTTTGCAATAC +
Preference number: 3 (lower is better)
Translates to: SFPFSLHRLTCVNFVSNYGAVKP*IHSLQY
Trigger: GTATTGCAAACTGTGAATCAAAGGCTTCACAGCCCC...GTAGTTGGAAACAAAATTGACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR CAA 90 bp TTGTCTCCATCCACATTACACATGCATGATAGAACCGTTTCATTAACTGTTGACACCGCTTTTGCTATTTaGTTATATCACAGATCCCCC +
Preference number: 3 (lower is better)
Translates to: LSPSTLHMHDRTVSLTVDTAFAI*LYHRSP
Trigger: GGGGGATCTGTGATATAACAAAATAGCAAAAGCGGT...GTCAACAGTTAATGAAACGGTTCTATCATGCATGTGTAATGTGGATGGAGACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR TCA 72 bp TTAAATATACAAGAACCGTTCTGTCCGTTTTTCTTCTaGCCGTGTTGGTATCCATCTGTGAGTTCAATCCAC +
Preference number: 3 (lower is better)
Translates to: LNIQEPFCPFFF*PCWYPSVSSIH
Trigger: GTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAGAAAAACGGACAGAACGGTTCTTGTATATTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR TCA 72 bp TCCTCCCATATTTGTTCTACAGCAGACTTTGGTCTATaGCTTAAAAAGGTCAGTATCACTCTCTTCCTTTCC +
Preference number: 3 (lower is better)
Translates to: SSHICSTADFGL*LKKVSITLFLS
Trigger: GGAAAGGAAGAGAGTGATACTGACCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAACAAATATGGGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR CCA 72 bp TCCACTCCATTACAATGTCTTTTATATGGAATCCTCTaGGGCTGTGAAGCCTTTGATTCACAGTTTGCAATA +
Preference number: 3 (lower is better)
Translates to: STPLQCLLYGIL*GCEAFDSQFAI
Trigger: TATTGCAAACTGTGAATCAAAGGCTTCACAGCCCCAGAGGATTCCATATAAAAGACATTGTAATGGAGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR CAA 90 bp TTGTCTCCATCCACATTACACATGCATGATAGAACCGTTTCATTAACTGTTGACACAGCTGATGCATTCTaGAGAATTGTTTCAGTTCAG +
Preference number: 3 (lower is better)
Translates to: LSPSTLHMHDRTVSLTVDTADAF*RIVSVQ
Trigger: CTGAACTGAAACAATTCTCAAGAATGCATCAGCTGT...GTCAACAGTTAATGAAACGGTTCTATCATGCATGTGTAATGTGGATGGAGACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR TCA 72 bp GTCCGTTTTTCTTCTGACCGTGTTGGTATCCATCTGTaGGTTCAATCCACTCCATTACAATGTCTTTTATAT +
Preference number: 3 (lower is better)
Translates to: VRFSSDRVGIHL*VQSTPLQCLLY
Trigger: ATATAAAAGACATTGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAGAAAAACGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR TCA 72 bp AAGATGAGGGATACTGCCTGCATTTTCTTAACATCATaGACACGAGACAAAACAACCCTCAGAACATATTTA +
Preference number: 3 (lower is better)
Translates to: KMRDTACIFLTS*TRDKTTLRTYL
Trigger: TAAATATGTTCTGAGGGTTGTTTTGTCTCGTGTTCATGATGTTAAGAAAATGCAGGCAGTATCCCTCATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR-3UTR CAA 90 bp AAACCTTTATATTTGAGTCTGCTTTTACCGGCAAATCCTGTAATTGATAAGGCAATGAGATTCCCGTTTTaGATTTTAGTGTCTCACGAC +
Preference number: 3 (lower is better)
Translates to: KPLYLSLLLPANPVIDKAMRFPF*ILVSHD
Trigger: GTCGTGAGACACTAAAATCAAAAACGGGAATCTCAT...TGCCTTATCAATTACAGGATTTGCCGGTAAAAGCAGACTCAAATATAAAGGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp CTCCGGTTCCCAGCCCTCTGCGGTGGGACCGATTCCAGAGCTGCAGGTGTTCTCCGAGCGCGCTCTAGCTaGGGCCCCGGACGCGGAACC +
Preference number: 4 (lower is better)
Translates to: LRFPALCGGTDSRAAGVLRARSS*GPGRGT
Trigger: GGTTCCGCGTCCGGGGCCGCAGCTAGAGCGCGCTCG...GAGAACACCTGCAGCTCTGGAATCGGTCCCACCGCAGAGGGCTGGGAACCGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR GCA 90 bp CTCCGGTTCCCAGCCCTCTGCGGTGGGACCGATTCCAGAGCTGCAGGTGTTCTCCCGGGAAGGACTCCTTaGCTGCGCACCGCGGCGGTT +
Preference number: 4 (lower is better)
Translates to: LRFPALCGGTDSRAAGVLPGRTP*LRTAAV
Trigger: AACCGCCGCGGTGCGCAGGCAAGGAGTCCTTCCCGG...GAGAACACCTGCAGCTCTGGAATCGGTCCCACCGCAGAGGGCTGGGAACCGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR GCA 90 bp CAGTCCTCCGGTTCCCAGCCCTCTGCGGTGGGACCGATTCCAGAGCTGCAGGTGTGTGAGGGATCGGCGTaGGTGGTCTCCCGACCCAGC +
Preference number: 4 (lower is better)
Translates to: QSSGSQPSAVGPIPELQVCEGSA*VVSRPS
Trigger: GCTGGGTCGGGAGACCACGCACGCCGATCCCTCACA...CACCTGCAGCTCTGGAATCGGTCCCACCGCAGAGGGCTGGGAACCGGAGGACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR GCA 90 bp CCTCCGGTTCCCAGCCCTCTGCGGTGGGACCGATTCCAGAGCTGCAGGTGTTCTGAAGGACTCCTTGCCTaGGCACCGCGGCGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: PPVPSPLRWDRFQSCRCSEGLLA*APRRFC
Trigger: GCAGAACCGCCGCGGTGCGCAGGCAAGGAGTCCTTC...AGAACACCTGCAGCTCTGGAATCGGTCCCACCGCAGAGGGCTGGGAACCGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR CCA 90 bp CTCCGGTTCCCAGCCCTCTGCGGTGGGACCGATTCCAGAGCTGCAGGTGTTCTCCCCAGCCCTCTGCGGTaGGACCGATTCCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LRFPALCGGTDSRAAGVLPSPLR*DRFQSC
Trigger: GCAGCTCTGGAATCGGTCCCACCGCAGAGGGCTGGG...GAGAACACCTGCAGCTCTGGAATCGGTCCCACCGCAGAGGGCTGGGAACCGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR GCA 90 bp GCTGCAGGTGTTCTCTGTTTACGCTCAGAGTGTACCGCCTCGGTCCCTTGCGATGCGGCCAGCTGGGGCTaGGCGCAGCAGGAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: AAGVLCLRSECTASVPCDAASWG*AQQEPK
Trigger: CTTGGGCTCCTGCTGCGCGCAGCCCCAGCTGGCCGC...ATCGCAAGGGACCGAGGCGGTACACTCTGAGCGTAAACAGAGAACACCTGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR GCA 90 bp CCTCCGGTTCCCAGCCCTCTGCGGTGGGACCGATTCCAGAGCTGCAGGTGTTCTACCGCCTCGGTCCCTTaGGATGTGAGTTGCGCGTGC +
Preference number: 4 (lower is better)
Translates to: PPVPSPLRWDRFQSCRCSTASVP*DVSCAC
Trigger: GCACGCGCAACTCACATCGCAAGGGACCGAGGCGGT...AGAACACCTGCAGCTCTGGAATCGGTCCCACCGCAGAGGGCTGGGAACCGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR CCA 90 bp CCTCCGGTTCCCAGCCCTCTGCGGTGGGACCGATTCCAGAGCTGCAGGTGTTCTAGGGATCGGCGTGCGTaGTCTCCCGACCCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: PPVPSPLRWDRFQSCRCSRDRRA*SPDPAQ
Trigger: TTGAGCTGGGTCGGGAGACCACGCACGCCGATCCCT...AGAACACCTGCAGCTCTGGAATCGGTCCCACCGCAGAGGGCTGGGAACCGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR GCA 90 bp CCCTCTGCGGTGGGACCGATTCCAGAGCTGCAGGTGTTCTCTGTTTACGCTCAGGGAGCTGCGCGGAGCTaGCGGGAAGGACTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: PSAVGPIPELQVFSVYAQGAARS*REGLLA
Trigger: GGCAAGGAGTCCTTCCCGGCAGCTCCGCGCAGCTCC...CTGAGCGTAAACAGAGAACACCTGCAGCTCTGGAATCGGTCCCACCGCAGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR GCA 90 bp GCTGCAGGTGTTCTCTGTTTACGCTCAGAGTGTACCGCCTCGGTCCCTTGCGATACGCGGAACCGGAGCTaGGCGGAGCTGCCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: AAGVLCLRSECTASVPCDTRNRS*AELPGR
Trigger: CCTTCCCGGCAGCTCCGCGCAGCTCCGGTTCCGCGT...ATCGCAAGGGACCGAGGCGGTACACTCTGAGCGTAAACAGAGAACACCTGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR GCA 90 bp AGCAGCCCCTTATGGGCTGGACCGACAGTCCTCCGGTTCCCAGCCCTCTGCGGTGCGCCCGGAAGTGCCTaGACAGGTTTAGGATGTTGG +
Preference number: 4 (lower is better)
Translates to: SSPLWAGPTVLRFPALCGAPGSA*TGLGCW
Trigger: CCAACATCCTAAACCTGTGCAGGCACTTCCGGGCGC...ACCGCAGAGGGCTGGGAACCGGAGGACTGTCGGTCCAGCCCATAAGGGGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR CCA 90 bp GCTGCAGGTGTTCTCTGTTTACGCTCAGAGTGTACCGCCTCGGTCCCTTGCGATTTGGCAGCGGCCAGCTaGGGCTGCGCGCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: AAGVLCLRSECTASVPCDLAAAS*GCAQQE
Trigger: CTCCTGCTGCGCGCAGCCCCAGCTGGCCGCTGCCAA...ATCGCAAGGGACCGAGGCGGTACACTCTGAGCGTAAACAGAGAACACCTGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR CCA 90 bp CTCCGGTTCCCAGCCCTCTGCGGTGGGACCGATTCCAGAGCTGCAGGTGTTCTCCAGCCCCTTATGGGCTaGACCGACAGTCCTCCGGTT +
Preference number: 4 (lower is better)
Translates to: LRFPALCGGTDSRAAGVLQPLMG*TDSPPV
Trigger: AACCGGAGGACTGTCGGTCCAGCCCATAAGGGGCTG...GAGAACACCTGCAGCTCTGGAATCGGTCCCACCGCAGAGGGCTGGGAACCGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR TCA 90 bp GCTGCAGGTGTTCTCTGTTTACGCTCAGAGTGTACCGCCTCGGTCCCTTGCGATCGGTCCCTTGCGATGTaGGTTGCGCGTGCGGTAGCT +
Preference number: 4 (lower is better)
Translates to: AAGVLCLRSECTASVPCDRSLAM*VARAVA
Trigger: AGCTACCGCACGCGCAACTCACATCGCAAGGGACCG...ATCGCAAGGGACCGAGGCGGTACACTCTGAGCGTAAACAGAGAACACCTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR GCA 90 bp AGCCCTCTGCGGTGGGACCGATTCCAGAGCTGCAGGTGTTCTCTGTTTACGCTCGCACCGCGGCGGTTCTaGCCGACGAAAAAGATGCGA +
Preference number: 4 (lower is better)
Translates to: SPLRWDRFQSCRCSLFTLAPRRF*PTKKMR
Trigger: TCGCATCTTTTTCGTCGGGCAGAACCGCCGCGGTGC...GAGCGTAAACAGAGAACACCTGCAGCTCTGGAATCGGTCCCACCGCAGAGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR GCA 90 bp CCAGAGCTGCAGGTGTTCTCTGTTTACGCTCAGAGTGTACCGCCTCGGTCCCTTCGGTTCCCAGCCCTCTaGGGTGGGACCGATTCCAGA +
Preference number: 4 (lower is better)
Translates to: PELQVFSVYAQSVPPRSLRFPAL*GGTDSR
Trigger: TCTGGAATCGGTCCCACCGCAGAGGGCTGGGAACCG...AAGGGACCGAGGCGGTACACTCTGAGCGTAAACAGAGAACACCTGCAGCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR GCA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGGGTAACCTTGCAGGCTaGCGTGAGGGGGCATTGTCA +
Preference number: 4 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRGNLAG*REGALS
Trigger: TGACAATGCCCCCTCACGGCAGCCTGCAAGGTTACC...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp GCCTGCACAGGTTTAGGATGTTGGGGTAGTCTCGCTGAGGCCAGGGGAGAGCCTGATGTGAGTTGCGCGTaGGGTAGCTGGAAACACAGT +
Preference number: 4 (lower is better)
Translates to: ACTGLGCWGSLAEARGEPDVSCA*GSWKHS
Trigger: ACTGTGTTTCCAGCTACCGCACGCGCAACTCACATC...AGGCTCTCCCCTGGCCTCAGCGAGACTACCCCAACATCCTAAACCTGTGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR CCA 90 bp CCCTCTGCGGTGGGACCGATTCCAGAGCTGCAGGTGTTCTCTGTTTACGCTCAGAGCTCAACTCTATTTTaGCAGCGGCCAGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: PSAVGPIPELQVFSVYAQSSTLF*QRPAGA
Trigger: AGCCCCAGCTGGCCGCTGCCAAAATAGAGTTGAGCT...CTGAGCGTAAACAGAGAACACCTGCAGCTCTGGAATCGGTCCCACCGCAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR TCA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGCATTATGGACTCGGGTaGGCTGGTATAGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRHYGLG*AGIGVW
Trigger: CCAGACCCCTATACCAGCTCACCCGAGTCCATAATG...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGCTTCAGCCTGCATACTaGTGGCCCGGATTTCGGGTA +
Preference number: 4 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRLQPAY*WPGFRV
Trigger: TACCCGAAATCCGGGCCATCAGTATGCAGGCTGAAG...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGCTTGTCAACCTTGGGTaGACAGACGCTGGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRLVNLG*TDAGCD
Trigger: GTCACAGCCAGCGTCTGTTCACCCAAGGTTGACAAG...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp CCCATAATGGTACCCAGACACTTTATCTCCACACACGGGACAAAGCTCTTCCAGGTGTGGGGGAGACTGTaGGGGATCGGCGTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: PIMVPRHFISTHGTKLFQVWGRL*GIGVRG
Trigger: ACCACGCACGCCGATCCCTCACAGTCTCCCCCACAC...CTGGAAGAGCTTTGTCCCGTGTGTGGAGATAAAGTGTCTGGGTACCATTATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR GCA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGCCAGGTATGCTGGCATaGACCCCTAGTCCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRPGMLA*TPSPSY
Trigger: ATAGCTGGGACTAGGGGTGCATGCCAGCATACCTGG...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp GAGTGTACCGCCTCGGTCCCTTGCGATGTGAGTTGCGCGTGCGGTAGCTGGAAAGACCGATTCCAGAGCTaGAGGTGTTCTCTGTTTACG +
Preference number: 4 (lower is better)
Translates to: ECTASVPCDVSCACGSWKDRFQS*RCSLFT
Trigger: CGTAAACAGAGAACACCTGCAGCTCTGGAATCGGTC...TTTCCAGCTACCGCACGCGCAACTCACATCGCAAGGGACCGAGGCGGTACACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR CCA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGGGAGGCAAGGCAGCATaGTTCAGAGGTAGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRGGKAA*FRGRPL
Trigger: CAAAGGCCTACCTCTGAACCATGCTGCCTTGCCTCC...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp CTTCTGACCGTGTTGGTATCCATCTGTGAGTTCAATCCACTCCATTACAATGTCGACCGCGGGCGGGGATaGGGGATCCGTGTCGGTCCG +
Preference number: 4 (lower is better)
Translates to: LLTVLVSICEFNPLHYNVDRGRG*GIRVGP
Trigger: CGGACCGACACGGATCCCCCATCCCCGCCCGCGGTC...GACATTGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367362.8
CDS-3UTR CCA 90 bp AGCAGCCCCTTATGGGCTGGACCGACAGTCCTCCGGTTCCCAGCCCTCTGCGGTGAAAAAGATGCGAAATaGTTGTGTGCTGCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: SSPLWAGPTVLRFPALCGEKDAK*LCAALS
Trigger: TGAGAGAGCAGCACACAACCATTTCGCATCTTTTTC...ACCGCAGAGGGCTGGGAACCGGAGGACTGTCGGTCCAGCCCATAAGGGGCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR CCA 90 bp TTCACAGGTGAGGAGCCCATAATGGTACCCAGACACTTTATCTCCACACACGGGCCCAGCAGCCCCTTATaGGCTGGACCGACAGTCCTC +
Preference number: 4 (lower is better)
Translates to: FTGEEPIMVPRHFISTHGPSSPL*AGPTVL
Trigger: GAGGACTGTCGGTCCAGCCCATAAGGGGCTGCTGGG...CCCGTGTGTGGAGATAAAGTGTCTGGGTACCATTATGGGCTCCTCACCTGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR CCA 90 bp CTCTTTAATTCACCCATGGGGTGTGGGGGAGACTGTGAGGGATCGGCGTGCGTGACAGGTTTAGGATGTTaGGGTAGTCTCGCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: LFNSPMGCGGDCEGSACVTGLGC*GSLAEA
Trigger: GGCCTCAGCGAGACTACCCCAACATCCTAAACCTGT...CACGCACGCCGATCCCTCACAGTCTCCCCCACACCCCATGGGTGAATTAAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR TCA 90 bp GCTGCAGGTGTTCTCTGTTTACGCTCAGAGTGTACCGCCTCGGTCCCTTGCGATTGCAGCTTTCACAGGTaGGGAGCCCATAATGGTACC +
Preference number: 4 (lower is better)
Translates to: AAGVLCLRSECTASVPCDCSFHR*GAHNGT
Trigger: GGTACCATTATGGGCTCCTCACCTGTGAAAGCTGCA...ATCGCAAGGGACCGAGGCGGTACACTCTGAGCGTAAACAGAGAACACCTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR TCA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGTTAGTACAGATTCGGTaGCCACAGGGCAGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRLVQIR*PQGRGA
Trigger: AGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAA...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGACCACTGGGTGTGGCTaGACACAGGTCCTTAGTACA +
Preference number: 4 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRTTGCG*TQVLST
Trigger: TGTACTAAGGACCTGTGTTCAGCCACACCCAGTGGT...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp GCCTGCACAGGTTTAGGATGTTGGGGTAGTCTCGCTGAGGCCAGGGGAGAGCCTTCAGGTAGCAATGTGTaGGCAAACCTTGCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: ACTGLGCWGSLAEARGEPSGSNV*ANLAAF
Trigger: GAAAGCTGCAAGGTTTGCTCACACATTGCTACCTGA...AGGCTCTCCCCTGGCCTCAGCGAGACTACCCCAACATCCTAAACCTGTGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR GCA 90 bp AGTCTCGCTGAGGCCAGGGGAGAGCCTTCTTCGGTACTTTTCTTGAGGTTTAGTTCCGGCGCCCGGAAGTaGCTGCACAGGTTTAGGATG +
Preference number: 4 (lower is better)
Translates to: SLAEARGEPSSVLFLRFSSGARK*LHRFRM
Trigger: CATCCTAAACCTGTGCAGGCACTTCCGGGCGCCGGA...ACTAAACCTCAAGAAAAGTACCGAAGAAGGCTCTCCCCTGGCCTCAGCGAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR TCA 90 bp CCAGAGCTGCAGGTGTTCTCTGTTTACGCTCAGAGTGTACCGCCTCGGTCCCTTCTTCGGTACTTTTCTTaGGGTTTAGTCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PELQVFSVYAQSVPPRSLLRYFS*GLVPSS
Trigger: GCTGCTGGGGACTAAACCTCAAGAAAAGTACCGAAG...AAGGGACCGAGGCGGTACACTCTGAGCGTAAACAGAGAACACCTGCAGCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR GCA 90 bp GGCTGGACCGACAGTCCTCCGGTTCCCAGCCCTCTGCGGTGGGACCGATTCCAGCTCTCATCTTTCTTGTaGCTGTATTTTCTGTGTTAT +
Preference number: 4 (lower is better)
Translates to: GWTDSPPVPSPLRWDRFQLSSFL*LYFLCY
Trigger: ATAACACAGAAAATACAGGCACAAGAAAGATGAGAG...CTGGAATCGGTCCCACCGCAGAGGGCTGGGAACCGGAGGACTGTCGGTCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR GCA 90 bp GCTGCAGGTGTTCTCTGTTTACGCTCAGAGTGTACCGCCTCGGTCCCTTGCGATGGTTGCAGAGAAAAGTaGAACAGCGTCTCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: AAGVLCLRSECTASVPCDGCREK*NSVSFP
Trigger: GGGGAAAGAGACGCTGTTGCACTTTTCTCTGCAACC...ATCGCAAGGGACCGAGGCGGTACACTCTGAGCGTAAACAGAGAACACCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR GCA 90 bp CATGATAGAACCGTTTCATTAACTGTTGACCACACCATTCCTCTCCATGTATCTCGCGGCGCGGCTCACTaGCGGGATCGGGTAACCGCC +
Preference number: 4 (lower is better)
Translates to: HDRTVSLTVDHTIPLHVSRGAAH*RDRVTA
Trigger: GGCGGTTACCCGATCCCGGCAGTGAGCCGCGCCGCG...AGATACATGGAGAGGAATGGTGTGGTCAACAGTTAATGAAACGGTTCTATCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544748.5
CDS-3UTR CCA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGATGTGGGATGCTTGCTaGAGAGCTCGTCTGGTAACT +
Preference number: 4 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRMWDAC*RARLVT
Trigger: AGTTACCAGACGAGCTCTCCAGCAAGCATCCCACAT...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGAGGTATTCTTCAGCCTaGATACTGATGGCCCGGATT +
Preference number: 4 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRRYSSA*ILMARI
Trigger: AATCCGGGCCATCAGTATGCAGGCTGAAGAATACCT...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp TTGCTTATCAGCTCCTGTCGTTGGTGTGATCAGCAGTGTGGATGTAACCCGCTGCAACGTAGCCAGGTATaGTGGCATGCACCCCTAGTC +
Preference number: 4 (lower is better)
Translates to: LLISSCRWCDQQCGCNPLQRSQV*WHAPLV
Trigger: GACTAGGGGTGCATGCCAGCATACCTGGCTACGTTG...CAGCGGGTTACATCCACACTGCTGATCACACCAACGACAGGAGCTGATAAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGGCTGTGACGCTTTCTTaGTTATCAGCTCCTGTCGTT +
Preference number: 4 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRAVTLS*LSAPVV
Trigger: AACGACAGGAGCTGATAAGCAAGAAAGCGTCACAGC...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp GTTATCCCGGAATCCGGCGCCCGGAAGTGCCTGCACAGGTTTAGGATGTTGGGGTGCGAAATGGTTGTGTaGTGCTCTCTCATCTTTCTT +
Preference number: 4 (lower is better)
Translates to: VIPESGARKCLHRFRMLGCEMVV*CSLIFL
Trigger: AAGAAAGATGAGAGAGCAGCACACAACCATTTCGCA...CCCCAACATCCTAAACCTGTGCAGGCACTTCCGGGCGCCGGATTCCGGGATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR GCA 90 bp TTCACAGGTGAGGAGCCCATAATGGTACCCAGACACTTTATCTCCACACACGGGCCTTGCGATGTGAGTTaGGCGTGCGGTAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: FTGEEPIMVPRHFISTHGPCDVS*ACGSWK
Trigger: TTTCCAGCTACCGCACGCGCAACTCACATCGCAAGG...CCCGTGTGTGGAGATAAAGTGTCTGGGTACCATTATGGGCTCCTCACCTGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR CCA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGTTCCAGTATCAGATGTaGGATGCTTGCTGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRFQYQM*DACWRA
Trigger: AGCTCTCCAGCAAGCATCCCACATCTGATACTGGAA...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp TTGCTTATCAGCTCCTGTCGTTGGTGTGATCAGCAGTGTGGATGTAACCCGCTGTGGTGGAGCTACCACTaGGTGTGGCTGAACACAGGT +
Preference number: 4 (lower is better)
Translates to: LLISSCRWCDQQCGCNPLWWSYH*VWLNTG
Trigger: ACCTGTGTTCAGCCACACCCAGTGGTAGCTCCACCA...CAGCGGGTTACATCCACACTGCTGATCACACCAACGACAGGAGCTGATAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp TTCACAGGTGAGGAGCCCATAATGGTACCCAGACACTTTATCTCCACACACGGGTGCGCGTGCGGTAGCTaGAAACACAGTTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: FTGEEPIMVPRHFISTHGCACGS*KHSSSR
Trigger: CCTGGAAGAACTGTGTTTCCAGCTACCGCACGCGCA...CCCGTGTGTGGAGATAAAGTGTCTGGGTACCATTATGGGCTCCTCACCTGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR TCA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGCATACGAACTCTCGTTaGTCAAACTGGAGAGAACGA +
Preference number: 4 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRHTNSR*SNWRER
Trigger: TCGTTCTCTCCAGTTTGATCAACGAGAGTTCGTATG...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGTGTCCGTTTTTCTTCTaGCCGTGTTGGTATCCATCT +
Preference number: 4 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRCPFFF*PCWYPS
Trigger: AGATGGATACCAACACGGTCAGAAGAAAAACGGACA...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp TTGCTTATCAGCTCCTGTCGTTGGTGTGATCAGCAGTGTGGATGTAACCCGCTGACCACTGGGTGTGGCTaGACACAGGTCCTTAGTACA +
Preference number: 4 (lower is better)
Translates to: LLISSCRWCDQQCGCNPLTTGCG*TQVLST
Trigger: TGTACTAAGGACCTGTGTTCAGCCACACCCAGTGGT...CAGCGGGTTACATCCACACTGCTGATCACACCAACGACAGGAGCTGATAAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGGTAATGCTTTGGGTATaGGCTCTGATCGGCGATTTT +
Preference number: 4 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRVMLWV*ALIGDF
Trigger: AAAATCGCCGATCAGAGCTCATACCCAAAGCATTAC...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp ATTCACCCATGGGGTGTGGGGGAGACTGTGAGGGATCGGCGTGCGTGGTCTCCCATAGGTGTAAGTCCGTaGTTTAAAGACTCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: IHPWGVGETVRDRRAWSPIGVSP*FKDSCK
Trigger: TTTACAAGAGTCTTTAAAGCACGGACTTACACCTAT...GGGAGACCACGCACGCCGATCCCTCACAGTCTCCCCCACACCCCATGGGTGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR GCA 90 bp AGCCCTCTGCGGTGGGACCGATTCCAGAGCTGCAGGTGTTCTCTGTTTACGCTCGAAATGGTTGTGTGCTaGTCTCTCATCTTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: SPLRWDRFQSCRCSLFTLEMVVC*SLIFLV
Trigger: CACAAGAAAGATGAGAGAGCAGCACACAACCATTTC...GAGCGTAAACAGAGAACACCTGCAGCTCTGGAATCGGTCCCACCGCAGAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR CCA 90 bp CCAGAGCTGCAGGTGTTCTCTGTTTACGCTCAGAGTGTACCGCCTCGGTCCCTTCAAATTTCGTGGCCTTaGGAAGGACACATCAGACTA +
Preference number: 4 (lower is better)
Translates to: PELQVFSVYAQSVPPRSLQISWP*EGHIRL
Trigger: TAGTCTGATGTGTCCTTCCCAAGGCCACGAAATTTG...AAGGGACCGAGGCGGTACACTCTGAGCGTAAACAGAGAACACCTGCAGCTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR CCA 90 bp AAGATAACACGGGTGACTGAGACTGCGCATGAGTCAACGCCCAGCTTACCTAATTGGACTCGGGTGAGCTaGTATAGGGGTCTGGGTACT +
Preference number: 4 (lower is better)
Translates to: KITRVTETAHESTPSLPNWTRVS*YRGLGT
Trigger: AGTACCCAGACCCCTATACCAGCTCACCCGAGTCCA...ATTAGGTAAGCTGGGCGTTGACTCATGCGCAGTCTCAGTCACCCGTGTTATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp CCTCCGGTTCCCAGCCCTCTGCGGTGGGACCGATTCCAGAGCTGCAGGTGTTCTAAAGAAGTAATCCACTaGTTTATTTTGGTGTTGGAC +
Preference number: 4 (lower is better)
Translates to: PPVPSPLRWDRFQSCRCSKEVIH*FILVLD
Trigger: GTCCAACACCAAAATAAACCAGTGGATTACTTCTTT...AGAACACCTGCAGCTCTGGAATCGGTCCCACCGCAGAGGGCTGGGAACCGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR TCA 90 bp AAGATAACACGGGTGACTGAGACTGCGCATGAGTCAACGCCCAGCTTACCTAATTTAGTACAGATTCGGTaGCCACAGGGCAGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: KITRVTETAHESTPSLPNLVQIR*PQGRGA
Trigger: AGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAA...ATTAGGTAAGCTGGGCGTTGACTCATGCGCAGTCTCAGTCACCCGTGTTATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp TTGCTTATCAGCTCCTGTCGTTGGTGTGATCAGCAGTGTGGATGTAACCCGCTGAACAGACGCTGGCTGTaGCGCTTTCTTGCTTATCAG +
Preference number: 4 (lower is better)
Translates to: LLISSCRWCDQQCGCNPLNRRWL*RFLAYQ
Trigger: CTGATAAGCAAGAAAGCGTCACAGCCAGCGTCTGTT...CAGCGGGTTACATCCACACTGCTGATCACACCAACGACAGGAGCTGATAAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGGGTAACCTTGCAGGCTaGCGTGAGGGGGCATTGTCA +
Preference number: 4 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMGNLAG*REGALS
Trigger: TGACAATGCCCCCTCACGGCAGCCTGCAAGGTTACC...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp AAGATAACACGGGTGACTGAGACTGCGCATGAGTCAACGCCCAGCTTACCTAATCAGATGTGGGATGCTTaGTGGAGAGCTCGTCTGGTA +
Preference number: 4 (lower is better)
Translates to: KITRVTETAHESTPSLPNQMWDA*WRARLV
Trigger: TACCAGACGAGCTCTCCAGCAAGCATCCCACATCTG...ATTAGGTAAGCTGGGCGTTGACTCATGCGCAGTCTCAGTCACCCGTGTTATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp ACAAGAACCGTTCTGTCCGTTTTTCTTCTGACCGTGTTGGTATCCATCTGTGAGACCACAGGGCAGAGGTaGTGGGGCCTTCAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: TRTVLSVFLLTVLVSICETTGQR*WGLQRK
Trigger: CTTCCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGT...CTCACAGATGGATACCAACACGGTCAGAAGAAAAACGGACAGAACGGTTCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp AGTCTCGCTGAGGCCAGGGGAGAGCCTTCTTCGGTACTTTTCTTGAGGTTTAGTGCCCGACGAAAAAGATaGGAAATGGTTGTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SLAEARGEPSSVLFLRFSARRKR*EMVVCC
Trigger: GCAGCACACAACCATTTCGCATCTTTTTCGTCGGGC...ACTAAACCTCAAGAAAAGTACCGAAGAAGGCTCTCCCCTGGCCTCAGCGAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR CCA 90 bp TCTTTAATTCACCCATGGGGTGTGGGGGAGACTGTGAGGGATCGGCGTGCGTGGACACGGCAAATTGACTaGAATTTTGTTATCCCGGAA +
Preference number: 4 (lower is better)
Translates to: SLIHPWGVGETVRDRRAWTRQID*NFVIPE
Trigger: TTCCGGGATAACAAAATTCCAGTCAATTTGCCGTGT...CCACGCACGCCGATCCCTCACAGTCTCCCCCACACCCCATGGGTGAATTAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR TCA 90 bp AAGATAACACGGGTGACTGAGACTGCGCATGAGTCAACGCCCAGCTTACCTAATATTTTAGCCTGGACTTaGGGCTCATCTGGCTCACAC +
Preference number: 4 (lower is better)
Translates to: KITRVTETAHESTPSLPNILAWT*GSSGSH
Trigger: GTGTGAGCCAGATGAGCCTCAAGTCCAGGCTAAAAT...ATTAGGTAAGCTGGGCGTTGACTCATGCGCAGTCTCAGTCACCCGTGTTATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGCTTCAGCCTGCATACTaGTGGCCCGGATTTCGGGTA +
Preference number: 4 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMLQPAY*WPGFRV
Trigger: TACCCGAAATCCGGGCCATCAGTATGCAGGCTGAAG...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGGCAGACTTTGGTCTATaGCTTAAAAAGGTCAGTATC +
Preference number: 4 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRADFGL*LKKVSI
Trigger: GATACTGACCTTTTTAAGTCATAGACCAAAGTCTGC...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp TTGCTTATCAGCTCCTGTCGTTGGTGTGATCAGCAGTGTGGATGTAACCCGCTGAGGTATTCTTCAGCCTaGATACTGATGGCCCGGATT +
Preference number: 4 (lower is better)
Translates to: LLISSCRWCDQQCGCNPLRYSSA*ILMARI
Trigger: AATCCGGGCCATCAGTATGCAGGCTGAAGAATACCT...CAGCGGGTTACATCCACACTGCTGATCACACCAACGACAGGAGCTGATAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp TTGCTTATCAGCTCCTGTCGTTGGTGTGATCAGCAGTGTGGATGTAACCCGCTGGCTGTGACGCTTTCTTaGTTATCAGCTCCTGTCGTT +
Preference number: 4 (lower is better)
Translates to: LLISSCRWCDQQCGCNPLAVTLS*LSAPVV
Trigger: AACGACAGGAGCTGATAAGCAAGAAAGCGTCACAGC...CAGCGGGTTACATCCACACTGCTGATCACACCAACGACAGGAGCTGATAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp ACAAGAACCGTTCTGTCCGTTTTTCTTCTGACCGTGTTGGTATCCATCTGTGAGTGGACTCGGGTGAGCTaGTATAGGGGTCTGGGTACT +
Preference number: 4 (lower is better)
Translates to: TRTVLSVFLLTVLVSICEWTRVS*YRGLGT
Trigger: AGTACCCAGACCCCTATACCAGCTCACCCGAGTCCA...CTCACAGATGGATACCAACACGGTCAGAAGAAAAACGGACAGAACGGTTCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp ACAAGAACCGTTCTGTCCGTTTTTCTTCTGACCGTGTTGGTATCCATCTGTGAGTGGTGGAGCTACCACTaGGTGTGGCTGAACACAGGT +
Preference number: 4 (lower is better)
Translates to: TRTVLSVFLLTVLVSICEWWSYH*VWLNTG
Trigger: ACCTGTGTTCAGCCACACCCAGTGGTAGCTCCACCA...CTCACAGATGGATACCAACACGGTCAGAAGAAAAACGGACAGAACGGTTCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp AAGATAACACGGGTGACTGAGACTGCGCATGAGTCAACGCCCAGCTTACCTAATCTGTTCATGATTTGGTaGAGCTACCACTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: KITRVTETAHESTPSLPNLFMIW*SYHWVW
Trigger: CCACACCCAGTGGTAGCTCCACCAAATCATGAACAG...ATTAGGTAAGCTGGGCGTTGACTCATGCGCAGTCTCAGTCACCCGTGTTATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR CAA 72 bp GGGGAGGGCAATGATGCTGCTGTTCTCTGTAATGCTTaGGGTATGAGCTCTGATCGGCGATTTTGCATTGTC +
Preference number: 4 (lower is better)
Translates to: GEGNDAAVLCNA*GMSSDRRFCIV
Trigger: GACAATGCAAAATCGCCGATCAGAGCTCATACCCAAAGCATTACAGAGAACAGCAGCATCATTGCCCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp CTTCTGACCGTGTTGGTATCCATCTGTGAGTTCAATCCACTCCATTACAATGTCCATTATGGACTCGGGTaGGCTGGTATAGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LLTVLVSICEFNPLHYNVHYGLG*AGIGVW
Trigger: CCAGACCCCTATACCAGCTCACCCGAGTCCATAATG...GACATTGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp CTTCTGACCGTGTTGGTATCCATCTGTGAGTTCAATCCACTCCATTACAATGTCCTTCAGCCTGCATACTaGTGGCCCGGATTTCGGGTA +
Preference number: 4 (lower is better)
Translates to: LLTVLVSICEFNPLHYNVLQPAY*WPGFRV
Trigger: TACCCGAAATCCGGGCCATCAGTATGCAGGCTGAAG...GACATTGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp TCCTTTCCTTTCTCTTTGCATAGATTAACATGCGTCAATTTTGTTTCCAACTACCCACTTTGGGCAGCATaGCAAGGCGACCGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: SFPFSLHRLTCVNFVSNYPLWAA*QGDRGR
Trigger: CCGCCCGCGGTCGCCTTGTCATGCTGCCCAAAGTGG...GTAGTTGGAAACAAAATTGACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367362.8
CDS-3UTR GCA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGTATGCTCTTTTGGCATaGAACATTTCAATGAGAAGG +
Preference number: 4 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRYALLA*NISMRR
Trigger: CCTTCTCATTGAAATGTTGCATGCCAAAAGAGCATA...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGCATCCACATTACACATaGATGATAGAACCGTTTCAT +
Preference number: 4 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRHPHYT*MIEPFH
Trigger: ATGAAACGGTTCTATCATGCATGTGTAATGTGGATG...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp AAGATAACACGGGTGACTGAGACTGCGCATGAGTCAACGCCCAGCTTACCTAATAGAAGATACTACTCCTaGCCCACTCGACAATGGAGA +
Preference number: 4 (lower is better)
Translates to: KITRVTETAHESTPSLPNRRYYS*PTRQWR
Trigger: TCTCCATTGTCGAGTGGGCCAGGAGTAGTATCTTCT...ATTAGGTAAGCTGGGCGTTGACTCATGCGCAGTCTCAGTCACCCGTGTTATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp CTTCTGACCGTGTTGGTATCCATCTGTGAGTTCAATCCACTCCATTACAATGTCTGGTGGAGCTACCACTaGGTGTGGCTGAACACAGGT +
Preference number: 4 (lower is better)
Translates to: LLTVLVSICEFNPLHYNVWWSYH*VWLNTG
Trigger: ACCTGTGTTCAGCCACACCCAGTGGTAGCTCCACCA...GACATTGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGATGTTTTCCGGCATCTaGCCCTGTTCCCCATGCGAT +
Preference number: 4 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMMFSGI*PCSPCD
Trigger: ATCGCATGGGGAACAGGGCCAGATGCCGGAAAACAT...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000367362.8
3UTR CAA 72 bp CATTTTAAATTGAGACACGGCAAATTGACTGGAATTTaGTTATCCCGGAATCCGGCGCCCGGAAGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: HFKLRHGKLTGI*LSRNPAPGSAC
Trigger: GCAGGCACTTCCGGGCGCCGGATTCCGGGATAACAAAATTCCAGTCAATTTGCCGTGTCTCAATTTAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR TCA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGGGTGGCTCCGGCTTGTaGTGCTATTATGGAATAGTC +
Preference number: 4 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMGGSGL*CYYGIV
Trigger: GACTATTCCATAATAGCATCACAAGCCGGAGCCACC...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp CATGATAGAACCGTTTCATTAACTGTTGACCACACCATTCCTCTCCATGTATCTCCAGCAGGGCGGCATTaGCTTGTTCCTGGACACCTT +
Preference number: 4 (lower is better)
Translates to: HDRTVSLTVDHTIPLHVSPAGRH*LVPGHL
Trigger: AAGGTGTCCAGGAACAAGTCAATGCCGCCCTGCTGG...AGATACATGGAGAGGAATGGTGTGGTCAACAGTTAATGAAACGGTTCTATCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp TTGCTTATCAGCTCCTGTCGTTGGTGTGATCAGCAGTGTGGATGTAACCCGCTGCAGCTGATGCATTCTTaGGAATTGTTTCAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: LLISSCRWCDQQCGCNPLQLMHS*ELFQFS
Trigger: GCTGAACTGAAACAATTCTCAAGAATGCATCAGCTG...CAGCGGGTTACATCCACACTGCTGATCACACCAACGACAGGAGCTGATAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp CTTCTGACCGTGTTGGTATCCATCTGTGAGTTCAATCCACTCCATTACAATGTCTTAGTACAGATTCGGTaGCCACAGGGCAGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: LLTVLVSICEFNPLHYNVLVQIR*PQGRGA
Trigger: AGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAA...GACATTGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp GGATGTTCAATTGCAGCAAGAATGAACCTTGAGTCAATACATCACCTCATCCTTGGTAACCTTGCAGGCTaGCGTGAGGGGGCATTGTCA +
Preference number: 4 (lower is better)
Translates to: GCSIAARMNLESIHHLILGNLAG*REGALS
Trigger: TGACAATGCCCCCTCACGGCAGCCTGCAAGGTTACC...AAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGGTATCAGATGTGGGATaGTTGCTGGAGAGCTCGTCT +
Preference number: 4 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMVSDVG*LLESSS
Trigger: AGACGAGCTCTCCAGCAAGCATCCCACATCTGATAC...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp GGATGTTCAATTGCAGCAAGAATGAACCTTGAGTCAATACATCACCTCATCCTTACCACAGGGCAGAGGTaGTGGGGCCTTCAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: GCSIAARMNLESIHHLILTTGQR*WGLQRK
Trigger: CTTCCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGT...AAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp TTTGTTCTACAGCAGACTTTGGTCTATGACTTAAAAAGGTCAGTATCACTCTCTTGGCCCTGTTCCCCATaGGATCGAGCCAGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: FVLQQTLVYDLKRSVSLSWPCSP*DRASPR
Trigger: CCTGGGACTGGCTCGATCGCATGGGGAACAGGGCCA...AGAGAGTGATACTGACCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367362.8
CDS-3UTR CCA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGAGACTTTCATACCTGTaGCATCGCATGTTAATAATA +
Preference number: 4 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRRLSYL*HRMLII
Trigger: TATTATTAACATGCGATGCCACAGGTATGAAAGTCT...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGTTCACTTGTCAACCTTaGGTGAACAGACGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMFTCQP*VNRRWL
Trigger: CAGCCAGCGTCTGTTCACCCAAGGTTGACAAGTGAA...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp CTTCTGACCGTGTTGGTATCCATCTGTGAGTTCAATCCACTCCATTACAATGTCGTATCAGATGTGGGATaGTTGCTGGAGAGCTCGTCT +
Preference number: 4 (lower is better)
Translates to: LLTVLVSICEFNPLHYNVVSDVG*LLESSS
Trigger: AGACGAGCTCTCCAGCAAGCATCCCACATCTGATAC...GACATTGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGAGGTATTCTTCAGCCTaGATACTGATGGCCCGGATT +
Preference number: 4 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMRYSSA*ILMARI
Trigger: AATCCGGGCCATCAGTATGCAGGCTGAAGAATACCT...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp TTGCTTATCAGCTCCTGTCGTTGGTGTGATCAGCAGTGTGGATGTAACCCGCTGTTCCTATTAGCTGTTTaGAGGTCTAAGACACAGACA +
Preference number: 4 (lower is better)
Translates to: LLISSCRWCDQQCGCNPLFLLAV*RSKTQT
Trigger: TGTCTGTGTCTTAGACCTGCAAACAGCTAATAGGAA...CAGCGGGTTACATCCACACTGCTGATCACACCAACGACAGGAGCTGATAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp ACAAGAACCGTTCTGTCCGTTTTTCTTCTGACCGTGTTGGTATCCATCTGTGAGTCAGAGGTAGGCCTTTaGAGGCAGAGTGGATGTTTT +
Preference number: 4 (lower is better)
Translates to: TRTVLSVFLLTVLVSICESEVGL*RQSGCF
Trigger: AAAACATCCACTCTGCCTCCAAAGGCCTACCTCTGA...CTCACAGATGGATACCAACACGGTCAGAAGAAAAACGGACAGAACGGTTCTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp CATGATAGAACCGTTTCATTAACTGTTGACCACACCATTCCTCTCCATGTATCTGGAGGCAAGGCAGCATaGTTCAGAGGTAGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: HDRTVSLTVDHTIPLHVSGGKAA*FRGRPL
Trigger: CAAAGGCCTACCTCTGAACCATGCTGCCTTGCCTCC...AGATACATGGAGAGGAATGGTGTGGTCAACAGTTAATGAAACGGTTCTATCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGTGGCCCACTCGACAATaGAGAAGAGAGTTTGATCTG +
Preference number: 4 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMWPTRQ*RREFDL
Trigger: CAGATCAAACTCTCTTCTCCATTGTCGAGTGGGCCA...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp CTTCTGACCGTGTTGGTATCCATCTGTGAGTTCAATCCACTCCATTACAATGTCGCATTGACTTGTTCCTaGACACCTTCTACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LLTVLVSICEFNPLHYNVALTCS*TPSTSW
Trigger: CCAGCTGGTAGAAGGTGTCCAGGAACAAGTCAATGC...GACATTGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp CTTCTGACCGTGTTGGTATCCATCTGTGAGTTCAATCCACTCCATTACAATGTCAGGCTGTTCATGATTTaGTGGAGCTACCACTGGGTG +
Preference number: 4 (lower is better)
Translates to: LLTVLVSICEFNPLHYNVRLFMI*WSYHWV
Trigger: CACCCAGTGGTAGCTCCACCAAATCATGAACAGCCT...GACATTGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp GGATGTTCAATTGCAGCAAGAATGAACCTTGAGTCAATACATCACCTCATCCTTTGCAGCTTTCACAGGTaGGGAGCCCATAATGGTACC +
Preference number: 4 (lower is better)
Translates to: GCSIAARMNLESIHHLILCSFHR*GAHNGT
Trigger: GGTACCATTATGGGCTCCTCACCTGTGAAAGCTGCA...AAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp ACACATGTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGCATTATGGACTCGGGTaGGCTGGTATAGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: THVKITISIPTLEDVQLQHYGLG*AGIGVW
Trigger: CCAGACCCCTATACCAGCTCACCCGAGTCCATAATG...CTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTACATGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp TTTGTTCTACAGCAGACTTTGGTCTATGACTTAAAAAGGTCAGTATCACTCTCTCCAGCAGGGCGGCATTaGCTTGTTCCTGGACACCTT +
Preference number: 4 (lower is better)
Translates to: FVLQQTLVYDLKRSVSLSPAGRH*LVPGHL
Trigger: AAGGTGTCCAGGAACAAGTCAATGCCGCCCTGCTGG...AGAGAGTGATACTGACCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp ACACATGTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGCTTGTCAACCTTGGGTaGACAGACGCTGGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: THVKITISIPTLEDVQLQLVNLG*TDAGCD
Trigger: GTCACAGCCAGCGTCTGTTCACCCAAGGTTGACAAG...CTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTACATGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp AAATGCCAGGTTACAAATCGGCTAACAATCAACATTAGAGAAACTTCACTTGTCACCACAGGGCAGAGGTaGTGGGGCCTTCAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: KCQVTNRLTINIRETSLVTTGQR*WGLQRK
Trigger: CTTCCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGT...GACAAGTGAAGTTTCTCTAATGTTGATTGTTAGCCGATTTGTAACCTGGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp TTGTCTCCATCCACATTACACATGCATGATAGAACCGTTTCATTAACTGTTGACCCAGGTATGCTGGCATaGACCCCTAGTCCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: LSPSTLHMHDRTVSLTVDPGMLA*TPSPSY
Trigger: ATAGCTGGGACTAGGGGTGCATGCCAGCATACCTGG...GTCAACAGTTAATGAAACGGTTCTATCATGCATGTGTAATGTGGATGGAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp ACAAGAACCGTTCTGTCCGTTTTTCTTCTGACCGTGTTGGTATCCATCTGTGAGCAAATTTCGTGGCCTTaGGAAGGACACATCAGACTA +
Preference number: 4 (lower is better)
Translates to: TRTVLSVFLLTVLVSICEQISWP*EGHIRL
Trigger: TAGTCTGATGTGTCCTTCCCAAGGCCACGAAATTTG...CTCACAGATGGATACCAACACGGTCAGAAGAAAAACGGACAGAACGGTTCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236914.7
ENST00000367362.8
CDS-3UTR CCA 90 bp GTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGCAAGAATGGACTCGGGTGAGCTaGTATAGGGGTCTGGGTACT +
Preference number: 4 (lower is better)
Translates to: VKITISIPTLEDVQLQQEWTRVS*YRGLGT
Trigger: AGTACCCAGACCCCTATACCAGCTCACCCGAGTCCA...TTCTTGCTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp CTTCTGACCGTGTTGGTATCCATCTGTGAGTTCAATCCACTCCATTACAATGTCTGGCCCACTCGACAATaGAGAAGAGAGTTTGATCTG +
Preference number: 4 (lower is better)
Translates to: LLTVLVSICEFNPLHYNVWPTRQ*RREFDL
Trigger: CAGATCAAACTCTCTTCTCCATTGTCGAGTGGGCCA...GACATTGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR CAA 72 bp GAGGGAGGGGCTATTGTAGGTACAGCTGATGCATTCTaGAGAATTGTTTCAGTTCAGCTTTACCATGGAGGA +
Preference number: 4 (lower is better)
Translates to: EGGAIVGTADAF*RIVSVQLYHGG
Trigger: TCCTCCATGGTAAAGCTGAACTGAAACAATTCTCAAGAATGCATCAGCTGTACCTACAATAGCCCCTCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp GTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGCAAGAATGCAGCTTTCACAGGTaGGGAGCCCATAATGGTACC +
Preference number: 4 (lower is better)
Translates to: VKITISIPTLEDVQLQQECSFHR*GAHNGT
Trigger: GGTACCATTATGGGCTCCTCACCTGTGAAAGCTGCA...TTCTTGCTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp ACACATGTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGTGCAGCTTTCACAGGTaGGGAGCCCATAATGGTACC +
Preference number: 4 (lower is better)
Translates to: THVKITISIPTLEDVQLQCSFHR*GAHNGT
Trigger: GGTACCATTATGGGCTCCTCACCTGTGAAAGCTGCA...CTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTACATGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp GGATGTTCAATTGCAGCAAGAATGAACCTTGAGTCAATACATCACCTCATCCTTATTTTAGCCTGGACTTaGGGCTCATCTGGCTCACAC +
Preference number: 4 (lower is better)
Translates to: GCSIAARMNLESIHHLILILAWT*GSSGSH
Trigger: GTGTGAGCCAGATGAGCCTCAAGTCCAGGCTAAAAT...AAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp ACAAGAACCGTTCTGTCCGTTTTTCTTCTGACCGTGTTGGTATCCATCTGTGAGTTCACCATTTTAAATTaGGACACTCGAGATCGCCCT +
Preference number: 4 (lower is better)
Translates to: TRTVLSVFLLTVLVSICEFTILN*DTRDRP
Trigger: AGGGCGATCTCGAGTGTCTCAATTTAAAATGGTGAA...CTCACAGATGGATACCAACACGGTCAGAAGAAAAACGGACAGAACGGTTCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544748.5
CDS-3UTR GCA 90 bp GTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGCAAGAACAGATGTGGGATGCTTaGTGGAGAGCTCGTCTGGTA +
Preference number: 4 (lower is better)
Translates to: VKITISIPTLEDVQLQQEQMWDA*WRARLV
Trigger: TACCAGACGAGCTCTCCAGCAAGCATCCCACATCTG...TTCTTGCTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp GTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGCAAGAAGTGCTCAGCTTTTCGTaGTTGCTTCGGTTAGCCTGC +
Preference number: 4 (lower is better)
Translates to: VKITISIPTLEDVQLQQEVLSFS*LLRLAC
Trigger: GCAGGCTAACCGAAGCAAGCACGAAAAGCTGAGCAC...TTCTTGCTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGGAAGAGAGTTTGATCTaGCATTTTGCACATAAGCCC +
Preference number: 4 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMEESLI*HFAHKP
Trigger: GGGCTTATGTGCAAAATGGCAGATCAAACTCTCTTC...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp ACAAGAACCGTTCTGTCCGTTTTTCTTCTGACCGTGTTGGTATCCATCTGTGAGGAAGAGAGTTTGATCTaGCATTTTGCACATAAGCCC +
Preference number: 4 (lower is better)
Translates to: TRTVLSVFLLTVLVSICEEESLI*HFAHKP
Trigger: GGGCTTATGTGCAAAATGGCAGATCAAACTCTCTTC...CTCACAGATGGATACCAACACGGTCAGAAGAAAAACGGACAGAACGGTTCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp TTTGTTCTACAGCAGACTTTGGTCTATGACTTAAAAAGGTCAGTATCACTCTCTGGAGGCAAGGCAGCATaGTTCAGAGGTAGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: FVLQQTLVYDLKRSVSLSGGKAA*FRGRPL
Trigger: CAAAGGCCTACCTCTGAACCATGCTGCCTTGCCTCC...AGAGAGTGATACTGACCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp GGATGTTCAATTGCAGCAAGAATGAACCTTGAGTCAATACATCACCTCATCCTTGCATTGACTTGTTCCTaGACACCTTCTACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GCSIAARMNLESIHHLILALTCS*TPSTSW
Trigger: CCAGCTGGTAGAAGGTGTCCAGGAACAAGTCAATGC...AAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGTTATATGGAATCCTCTaGGGCTGTGAAGCCTTTGAT +
Preference number: 4 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMLYGIL*GCEAFD
Trigger: ATCAAAGGCTTCACAGCCCCAGAGGATTCCATATAA...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp ACAAGAACCGTTCTGTCCGTTTTTCTTCTGACCGTGTTGGTATCCATCTGTGAGTTATATGGAATCCTCTaGGGCTGTGAAGCCTTTGAT +
Preference number: 4 (lower is better)
Translates to: TRTVLSVFLLTVLVSICELYGIL*GCEAFD
Trigger: ATCAAAGGCTTCACAGCCCCAGAGGATTCCATATAA...CTCACAGATGGATACCAACACGGTCAGAAGAAAAACGGACAGAACGGTTCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp GGATGTTCAATTGCAGCAAGAATGAACCTTGAGTCAATACATCACCTCATCCTTATCAGCTCCTGTCGTTaGTGTGATCAGCAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: GCSIAARMNLESIHHLILISSCR*CDQQCG
Trigger: TCCACACTGCTGATCACACCAACGACAGGAGCTGAT...AAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp CATGATAGAACCGTTTCATTAACTGTTGACCACACCATTCCTCTCCATGTATCTTTCACTTGTCAACCTTaGGTGAACAGACGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: HDRTVSLTVDHTIPLHVSFTCQP*VNRRWL
Trigger: CAGCCAGCGTCTGTTCACCCAAGGTTGACAAGTGAA...AGATACATGGAGAGGAATGGTGTGGTCAACAGTTAATGAAACGGTTCTATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR CAA 72 bp ACAAGAACCGTTCTGTCCGTTTTTCTTCTGACCGTGTaGGTATCCATCTGTGAGTTCAATCCACTCCATTAC +
Preference number: 4 (lower is better)
Translates to: TRTVLSVFLLTV*VSICEFNPLHY
Trigger: GTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAGAAAAACGGACAGAACGGTTCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp ACACATGTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGATTTTAGCCTGGACTTaGGGCTCATCTGGCTCACAC +
Preference number: 4 (lower is better)
Translates to: THVKITISIPTLEDVQLQILAWT*GSSGSH
Trigger: GTGTGAGCCAGATGAGCCTCAAGTCCAGGCTAAAAT...CTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTACATGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp CTTCTGACCGTGTTGGTATCCATCTGTGAGTTCAATCCACTCCATTACAATGTCCAGCTGATGCATTCTTaGGAATTGTTTCAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: LLTVLVSICEFNPLHYNVQLMHS*ELFQFS
Trigger: GCTGAACTGAAACAATTCTCAAGAATGCATCAGCTG...GACATTGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp CTTCTGACCGTGTTGGTATCCATCTGTGAGTTCAATCCACTCCATTACAATGTCAAATTAGGCTGTTCATaGTTTGGTGGAGCTACCACT +
Preference number: 4 (lower is better)
Translates to: LLTVLVSICEFNPLHYNVKLGCS*FGGATT
Trigger: AGTGGTAGCTCCACCAAATCATGAACAGCCTAATTT...GACATTGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGCAATTGCAGCAAGAATaGACCTTGAGTCAATACATC +
Preference number: 4 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMQLQQE*TLSQYI
Trigger: GATGTATTGACTCAAGGTTCATTCTTGCTGCAATTG...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp GTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGCAAGAAAACAGACGCTGGCTGTaGCGCTTTCTTGCTTATCAG +
Preference number: 4 (lower is better)
Translates to: VKITISIPTLEDVQLQQENRRWL*RFLAYQ
Trigger: CTGATAAGCAAGAAAGCGTCACAGCCAGCGTCTGTT...TTCTTGCTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp CTTCTGACCGTGTTGGTATCCATCTGTGAGTTCAATCCACTCCATTACAATGTCGTGGATGTTTTGAATTaGAGAGGAAATGGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: LLTVLVSICEFNPLHYNVVDVLN*RGNGQV
Trigger: GACCTGACCATTTCCTCTGCAATTCAAAACATCCAC...GACATTGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp TTTGTTCTACAGCAGACTTTGGTCTATGACTTAAAAAGGTCAGTATCACTCTCTCAGATGTGGGATGCTTaGTGGAGAGCTCGTCTGGTA +
Preference number: 4 (lower is better)
Translates to: FVLQQTLVYDLKRSVSLSQMWDA*WRARLV
Trigger: TACCAGACGAGCTCTCCAGCAAGCATCCCACATCTG...AGAGAGTGATACTGACCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp TTGTCTCCATCCACATTACACATGCATGATAGAACCGTTTCATTAACTGTTGACGTATCAGATGTGGGATaGTTGCTGGAGAGCTCGTCT +
Preference number: 4 (lower is better)
Translates to: LSPSTLHMHDRTVSLTVDVSDVG*LLESSS
Trigger: AGACGAGCTCTCCAGCAAGCATCCCACATCTGATAC...GTCAACAGTTAATGAAACGGTTCTATCATGCATGTGTAATGTGGATGGAGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp AAATGCCAGGTTACAAATCGGCTAACAATCAACATTAGAGAAACTTCACTTGTCGTGCTCAGCTTTTCGTaGTTGCTTCGGTTAGCCTGC +
Preference number: 4 (lower is better)
Translates to: KCQVTNRLTINIRETSLVVLSFS*LLRLAC
Trigger: GCAGGCTAACCGAAGCAAGCACGAAAAGCTGAGCAC...GACAAGTGAAGTTTCTCTAATGTTGATTGTTAGCCGATTTGTAACCTGGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp CTTCTGACCGTGTTGGTATCCATCTGTGAGTTCAATCCACTCCATTACAATGTCGAAGAGAGTTTGATCTaGCATTTTGCACATAAGCCC +
Preference number: 4 (lower is better)
Translates to: LLTVLVSICEFNPLHYNVEESLI*HFAHKP
Trigger: GGGCTTATGTGCAAAATGGCAGATCAAACTCTCTTC...GACATTGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp ACAAGAACCGTTCTGTCCGTTTTTCTTCTGACCGTGTTGGTATCCATCTGTGAGTTCCTATTAGCTGTTTaGAGGTCTAAGACACAGACA +
Preference number: 4 (lower is better)
Translates to: TRTVLSVFLLTVLVSICEFLLAV*RSKTQT
Trigger: TGTCTGTGTCTTAGACCTGCAAACAGCTAATAGGAA...CTCACAGATGGATACCAACACGGTCAGAAGAAAAACGGACAGAACGGTTCTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp AAGATAACACGGGTGACTGAGACTGCGCATGAGTCAACGCCCAGCTTACCTAATGTATACAATTTACAATaGTTGGAAAGGAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: KITRVTETAHESTPSLPNVYNLQ*LERKTR
Trigger: CCTGGTTTTCCTTTCCAAGCATTGTAAATTGTATAC...ATTAGGTAAGCTGGGCGTTGACTCATGCGCAGTCTCAGTCACCCGTGTTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp AAACCTTTATATTTGAGTCTGCTTTTACCGGCAAATCCTGTAATTGATAAGGCACAACGTAGCCAGGTATaGTGGCATGCACCCCTAGTC +
Preference number: 4 (lower is better)
Translates to: KPLYLSLLLPANPVIDKAQRSQV*WHAPLV
Trigger: GACTAGGGGTGCATGCCAGCATACCTGGCTACGTTG...TGCCTTATCAATTACAGGATTTGCCGGTAAAAGCAGACTCAAATATAAAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp ACAAGAACCGTTCTGTCCGTTTTTCTTCTGACCGTGTTGGTATCCATCTGTGAGTCACACTCTAAACATTaGATGGATTCAAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: TRTVLSVFLLTVLVSICESHSKH*MDSSPR
Trigger: CCTTGGACTTGAATCCATGCAATGTTTAGAGTGTGA...CTCACAGATGGATACCAACACGGTCAGAAGAAAAACGGACAGAACGGTTCTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp GGATGTTCAATTGCAGCAAGAATGAACCTTGAGTCAATACATCACCTCATCCTTGCTTGTCAAATTTCGTaGCCTTGGGAAGGACACATC +
Preference number: 4 (lower is better)
Translates to: GCSIAARMNLESIHHLILACQIS*PWEGHI
Trigger: GATGTGTCCTTCCCAAGGCCACGAAATTTGACAAGC...AAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236914.7
ENST00000367362.8
CDS-3UTR CCA 90 bp AAGATAACACGGGTGACTGAGACTGCGCATGAGTCAACGCCCAGCTTACCTAATTCAATTTGGCAGTTCTaGTTTTCTATACATGTGTAC +
Preference number: 4 (lower is better)
Translates to: KITRVTETAHESTPSLPNSIWQF*FSIHVY
Trigger: GTACACATGTATAGAAAACCAGAACTGCCAAATTGA...ATTAGGTAAGCTGGGCGTTGACTCATGCGCAGTCTCAGTCACCCGTGTTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp GGATGTTCAATTGCAGCAAGAATGAACCTTGAGTCAATACATCACCTCATCCTTTCAGAGGTAGGCCTTTaGAGGCAGAGTGGATGTTTT +
Preference number: 4 (lower is better)
Translates to: GCSIAARMNLESIHHLILSEVGL*RQSGCF
Trigger: AAAACATCCACTCTGCCTCCAAAGGCCTACCTCTGA...AAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp CATGATAGAACCGTTTCATTAACTGTTGACCACACCATTCCTCTCCATGTATCTTCAGAGGTAGGCCTTTaGAGGCAGAGTGGATGTTTT +
Preference number: 4 (lower is better)
Translates to: HDRTVSLTVDHTIPLHVSSEVGL*RQSGCF
Trigger: AAAACATCCACTCTGCCTCCAAAGGCCTACCTCTGA...AGATACATGGAGAGGAATGGTGTGGTCAACAGTTAATGAAACGGTTCTATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp TTGTCTCCATCCACATTACACATGCATGATAGAACCGTTTCATTAACTGTTGACATGTGGGATGCTTGCTaGAGAGCTCGTCTGGTAACT +
Preference number: 4 (lower is better)
Translates to: LSPSTLHMHDRTVSLTVDMWDAC*RARLVT
Trigger: AGTTACCAGACGAGCTCTCCAGCAAGCATCCCACAT...GTCAACAGTTAATGAAACGGTTCTATCATGCATGTGTAATGTGGATGGAGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp GGATGTTCAATTGCAGCAAGAATGAACCTTGAGTCAATACATCACCTCATCCTTTTCCAGTATCAGATGTaGGATGCTTGCTGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: GCSIAARMNLESIHHLILFQYQM*DACWRA
Trigger: AGCTCTCCAGCAAGCATCCCACATCTGATACTGGAA...AAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp TTGTCTCCATCCACATTACACATGCATGATAGAACCGTTTCATTAACTGTTGACGCATTGACTTGTTCCTaGACACCTTCTACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LSPSTLHMHDRTVSLTVDALTCS*TPSTSW
Trigger: CCAGCTGGTAGAAGGTGTCCAGGAACAAGTCAATGC...GTCAACAGTTAATGAAACGGTTCTATCATGCATGTGTAATGTGGATGGAGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp GTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGCAAGAAAGGCTGTTCATGATTTaGTGGAGCTACCACTGGGTG +
Preference number: 4 (lower is better)
Translates to: VKITISIPTLEDVQLQQERLFMI*WSYHWV
Trigger: CACCCAGTGGTAGCTCCACCAAATCATGAACAGCCT...TTCTTGCTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGTGTGTACCCTTCATGTaGATGAGTATTAGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMCVPFM*MSIRGD
Trigger: ATCACCTCTAATACTCATCCACATGAAGGGTACACA...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp GGATGTTCAATTGCAGCAAGAATGAACCTTGAGTCAATACATCACCTCATCCTTATAGCTTGGATCACCTaGGACATGGCTTCTAGCTTA +
Preference number: 4 (lower is better)
Translates to: GCSIAARMNLESIHHLILIAWIT*DMASSL
Trigger: TAAGCTAGAAGCCATGTCTCAGGTGATCCAAGCTAT...AAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp AAATGCCAGGTTACAAATCGGCTAACAATCAACATTAGAGAAACTTCACTTGTCGGTGGCTCCGGCTTGTaGTGCTATTATGGAATAGTC +
Preference number: 4 (lower is better)
Translates to: KCQVTNRLTINIRETSLVGGSGL*CYYGIV
Trigger: GACTATTCCATAATAGCATCACAAGCCGGAGCCACC...GACAAGTGAAGTTTCTCTAATGTTGATTGTTAGCCGATTTGTAACCTGGCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp GGATGTTCAATTGCAGCAAGAATGAACCTTGAGTCAATACATCACCTCATCCTTCATACGAACTCTCGTTaGTCAAACTGGAGAGAACGA +
Preference number: 4 (lower is better)
Translates to: GCSIAARMNLESIHHLILHTNSR*SNWRER
Trigger: TCGTTCTCTCCAGTTTGATCAACGAGAGTTCGTATG...AAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGCATGCAACATTTCAATaGGAAGGTTATTATAGGGCA +
Preference number: 4 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMHATFQ*EGYYRA
Trigger: TGCCCTATAATAACCTTCTCATTGAAATGTTGCATG...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp TCCTTTCCTTTCTCTTTGCATAGATTAACATGCGTCAATTTTGTTTCCAACTACACCACTGGGTGTGGCTaGACACAGGTCCTTAGTACA +
Preference number: 4 (lower is better)
Translates to: SFPFSLHRLTCVNFVSNYTTGCG*TQVLST
Trigger: TGTACTAAGGACCTGTGTTCAGCCACACCCAGTGGT...GTAGTTGGAAACAAAATTGACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp CATGATAGAACCGTTTCATTAACTGTTGACCACACCATTCCTCTCCATGTATCTTTTTGCATTGTCCTTTaGGCCACGAAGATAACACGG +
Preference number: 4 (lower is better)
Translates to: HDRTVSLTVDHTIPLHVSFCIVL*ATKITR
Trigger: CCGTGTTATCTTCGTGGCTCAAAGGACAATGCAAAA...AGATACATGGAGAGGAATGGTGTGGTCAACAGTTAATGAAACGGTTCTATCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp GGATGTTCAATTGCAGCAAGAATGAACCTTGAGTCAATACATCACCTCATCCTTTTTGGGTATGAGCTCTaGTCGGCGATTTTGCATTGT +
Preference number: 4 (lower is better)
Translates to: GCSIAARMNLESIHHLILFGYEL*SAILHC
Trigger: ACAATGCAAAATCGCCGATCAGAGCTCATACCCAAA...AAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp CATGATAGAACCGTTTCATTAACTGTTGACCACACCATTCCTCTCCATGTATCTCGTTTCATTAACTGTTaGCCACACCATTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: HDRTVSLTVDHTIPLHVSRFINC*PHHSSP
Trigger: TGGAGAGGAATGGTGTGGTCAACAGTTAATGAAACG...AGATACATGGAGAGGAATGGTGTGGTCAACAGTTAATGAAACGGTTCTATCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp AAACCTTTATATTTGAGTCTGCTTTTACCGGCAAATCCTGTAATTGATAAGGCAGTGCTCAGCTTTTCGTaGTTGCTTCGGTTAGCCTGC +
Preference number: 4 (lower is better)
Translates to: KPLYLSLLLPANPVIDKAVLSFS*LLRLAC
Trigger: GCAGGCTAACCGAAGCAAGCACGAAAAGCTGAGCAC...TGCCTTATCAATTACAGGATTTGCCGGTAAAAGCAGACTCAAATATAAAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGTATGCTCTTTTGGCATaGAACATTTCAATGAGAAGG +
Preference number: 4 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMYALLA*NISMRR
Trigger: CCTTCTCATTGAAATGTTGCATGCCAAAAGAGCATA...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGTATGAAATCCAACAATaGCAAAGCCACATTTCAGCA +
Preference number: 4 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMYEIQQ*QSHISA
Trigger: TGCTGAAATGTGGCTTTGGCATTGTTGGATTTCATA...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGCATCCACATTACACATaGATGATAGAACCGTTTCAT +
Preference number: 4 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMHPHYT*MIEPFH
Trigger: ATGAAACGGTTCTATCATGCATGTGTAATGTGGATG...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp CATGATAGAACCGTTTCATTAACTGTTGACCACACCATTCCTCTCCATGTATCTGACTTGAGGCTCATCTaGCTCACACTTCAAAAGTTC +
Preference number: 4 (lower is better)
Translates to: HDRTVSLTVDHTIPLHVSDLRLI*LTLQKF
Trigger: GAACTTTTGAAGTGTGAGCCAGATGAGCCTCAAGTC...AGATACATGGAGAGGAATGGTGTGGTCAACAGTTAATGAAACGGTTCTATCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp GGATGTTCAATTGCAGCAAGAATGAACCTTGAGTCAATACATCACCTCATCCTTGACTTGAGGCTCATCTaGCTCACACTTCAAAAGTTC +
Preference number: 4 (lower is better)
Translates to: GCSIAARMNLESIHHLILDLRLI*LTLQKF
Trigger: GAACTTTTGAAGTGTGAGCCAGATGAGCCTCAAGTC...AAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp TTTGTTCTACAGCAGACTTTGGTCTATGACTTAAAAAGGTCAGTATCACTCTCTCTGTTCATGATTTGGTaGAGCTACCACTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: FVLQQTLVYDLKRSVSLSLFMIW*SYHWVW
Trigger: CCACACCCAGTGGTAGCTCCACCAAATCATGAACAG...AGAGAGTGATACTGACCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp TTTGTTCTACAGCAGACTTTGGTCTATGACTTAAAAAGGTCAGTATCACTCTCTATCAGCTCCTGTCGTTaGTGTGATCAGCAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: FVLQQTLVYDLKRSVSLSISSCR*CDQQCG
Trigger: TCCACACTGCTGATCACACCAACGACAGGAGCTGAT...AGAGAGTGATACTGACCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp TCCTTTCCTTTCTCTTTGCATAGATTAACATGCGTCAATTTTGTTTCCAACTACGGTGGCTCCGGCTTGTaGTGCTATTATGGAATAGTC +
Preference number: 4 (lower is better)
Translates to: SFPFSLHRLTCVNFVSNYGGSGL*CYYGIV
Trigger: GACTATTCCATAATAGCATCACAAGCCGGAGCCACC...GTAGTTGGAAACAAAATTGACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp GGATGTTCAATTGCAGCAAGAATGAACCTTGAGTCAATACATCACCTCATCCTTGTTGGTATCCATCTGTaGGTTCAATCCACTCCATTA +
Preference number: 4 (lower is better)
Translates to: GCSIAARMNLESIHHLILVGIHL*VQSTPL
Trigger: TAATGGAGTGGATTGAACTCACAGATGGATACCAAC...AAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp TTGTCTCCATCCACATTACACATGCATGATAGAACCGTTTCATTAACTGTTGACTGTCCGTTTTTCTTCTaGCCGTGTTGGTATCCATCT +
Preference number: 4 (lower is better)
Translates to: LSPSTLHMHDRTVSLTVDCPFFF*PCWYPS
Trigger: AGATGGATACCAACACGGTCAGAAGAAAAACGGACA...GTCAACAGTTAATGAAACGGTTCTATCATGCATGTGTAATGTGGATGGAGACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp CTTCTGACCGTGTTGGTATCCATCTGTGAGTTCAATCCACTCCATTACAATGTCTATTGTAGGTACAGCTaGTGCATTCTTGAGAATTGT +
Preference number: 4 (lower is better)
Translates to: LLTVLVSICEFNPLHYNVYCRYS*CILENC
Trigger: ACAATTCTCAAGAATGCATCAGCTGTACCTACAATA...GACATTGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp CTTCTGACCGTGTTGGTATCCATCTGTGAGTTCAATCCACTCCATTACAATGTCAGAACTGTGACTATTTaGCATCCTAGCAAAATGTGT +
Preference number: 4 (lower is better)
Translates to: LLTVLVSICEFNPLHYNVRTVTI*HPSKMC
Trigger: ACACATTTTGCTAGGATGTCAAATAGTCACAGTTCT...GACATTGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp TTGTCTCCATCCACATTACACATGCATGATAGAACCGTTTCATTAACTGTTGACTTTTGCATTGTCCTTTaGGCCACGAAGATAACACGG +
Preference number: 4 (lower is better)
Translates to: LSPSTLHMHDRTVSLTVDFCIVL*ATKITR
Trigger: CCGTGTTATCTTCGTGGCTCAAAGGACAATGCAAAA...GTCAACAGTTAATGAAACGGTTCTATCATGCATGTGTAATGTGGATGGAGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp ACACATGTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGTTTGGGTATGAGCTCTaGTCGGCGATTTTGCATTGT +
Preference number: 4 (lower is better)
Translates to: THVKITISIPTLEDVQLQFGYEL*SAILHC
Trigger: ACAATGCAAAATCGCCGATCAGAGCTCATACCCAAA...CTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTACATGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp GTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGCAAGAAGTAATGCTTTGGGTATaGGCTCTGATCGGCGATTTT +
Preference number: 4 (lower is better)
Translates to: VKITISIPTLEDVQLQQEVMLWV*ALIGDF
Trigger: AAAATCGCCGATCAGAGCTCATACCCAAAGCATTAC...TTCTTGCTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp CTTCTGACCGTGTTGGTATCCATCTGTGAGTTCAATCCACTCCATTACAATGTCTATGAAATCCAACAATaGCAAAGCCACATTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LLTVLVSICEFNPLHYNVYEIQQ*QSHISA
Trigger: TGCTGAAATGTGGCTTTGGCATTGTTGGATTTCATA...GACATTGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp GTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGCAAGAACAAATTTCGTGGCCTTaGGAAGGACACATCAGACTA +
Preference number: 4 (lower is better)
Translates to: VKITISIPTLEDVQLQQEQISWP*EGHIRL
Trigger: TAGTCTGATGTGTCCTTCCCAAGGCCACGAAATTTG...TTCTTGCTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236914.7
ENST00000367362.8
CDS-3UTR CCA 90 bp GGATGTTCAATTGCAGCAAGAATGAACCTTGAGTCAATACATCACCTCATCCTTGTCTCTCTTGTACATTaGCCCAAACTTATTCCTTCC +
Preference number: 4 (lower is better)
Translates to: GCSIAARMNLESIHHLILVSLVH*PKLIPS
Trigger: GGAAGGAATAAGTTTGGGCCAATGTACAAGAGAGAC...AAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp TTTGTTCTACAGCAGACTTTGGTCTATGACTTAAAAAGGTCAGTATCACTCTCTTGGCCCACTCGACAATaGAGAAGAGAGTTTGATCTG +
Preference number: 4 (lower is better)
Translates to: FVLQQTLVYDLKRSVSLSWPTRQ*RREFDL
Trigger: CAGATCAAACTCTCTTCTCCATTGTCGAGTGGGCCA...AGAGAGTGATACTGACCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp AAATGCCAGGTTACAAATCGGCTAACAATCAACATTAGAGAAACTTCACTTGTCAGAAGATACTACTCCTaGCCCACTCGACAATGGAGA +
Preference number: 4 (lower is better)
Translates to: KCQVTNRLTINIRETSLVRRYYS*PTRQWR
Trigger: TCTCCATTGTCGAGTGGGCCAGGAGTAGTATCTTCT...GACAAGTGAAGTTTCTCTAATGTTGATTGTTAGCCGATTTGTAACCTGGCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGTTAATTAGCGTTACTTaGAGCAGTTCAGAGTACTTT +
Preference number: 4 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMLISVT*SSSEYF
Trigger: AAAGTACTCTGAACTGCTCCAAGTAACGCTAATTAA...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp TCCTTTCCTTTCTCTTTGCATAGATTAACATGCGTCAATTTTGTTTCCAACTACCTGTTCATGATTTGGTaGAGCTACCACTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SFPFSLHRLTCVNFVSNYLFMIW*SYHWVW
Trigger: CCACACCCAGTGGTAGCTCCACCAAATCATGAACAG...GTAGTTGGAAACAAAATTGACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp TCCTTTCCTTTCTCTTTGCATAGATTAACATGCGTCAATTTTGTTTCCAACTACAGGCTGTTCATGATTTaGTGGAGCTACCACTGGGTG +
Preference number: 4 (lower is better)
Translates to: SFPFSLHRLTCVNFVSNYRLFMI*WSYHWV
Trigger: CACCCAGTGGTAGCTCCACCAAATCATGAACAGCCT...GTAGTTGGAAACAAAATTGACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp ACACATGTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGGTTGGTATCCATCTGTaGGTTCAATCCACTCCATTA +
Preference number: 4 (lower is better)
Translates to: THVKITISIPTLEDVQLQVGIHL*VQSTPL
Trigger: TAATGGAGTGGATTGAACTCACAGATGGATACCAAC...CTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTACATGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp GGATGTTCAATTGCAGCAAGAATGAACCTTGAGTCAATACATCACCTCATCCTTAACACTTACATAAGATaGGGGATACTGCCTGCATTT +
Preference number: 4 (lower is better)
Translates to: GCSIAARMNLESIHHLILNTYIR*GILPAF
Trigger: AAATGCAGGCAGTATCCCTCATCTTATGTAAGTGTT...AAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp GGATGTTCAATTGCAGCAAGAATGAACCTTGAGTCAATACATCACCTCATCCTTCAATTGCAGCAAGAATaGACCTTGAGTCAATACATC +
Preference number: 4 (lower is better)
Translates to: GCSIAARMNLESIHHLILQLQQE*TLSQYI
Trigger: GATGTATTGACTCAAGGTTCATTCTTGCTGCAATTG...AAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp GGATGTTCAATTGCAGCAAGAATGAACCTTGAGTCAATACATCACCTCATCCTTGCAGACTTTGGTCTATaGCTTAAAAAGGTCAGTATC +
Preference number: 4 (lower is better)
Translates to: GCSIAARMNLESIHHLILADFGL*LKKVSI
Trigger: GATACTGACCTTTTTAAGTCATAGACCAAAGTCTGC...AAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp GGATGTTCAATTGCAGCAAGAATGAACCTTGAGTCAATACATCACCTCATCCTTAAGACTCCACCTTGTTaGGTTTACTTGAAAACCAGA +
Preference number: 4 (lower is better)
Translates to: GCSIAARMNLESIHHLILKTPPC*VYLKTR
Trigger: TCTGGTTTTCAAGTAAACTCAACAAGGTGGAGTCTT...AAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp TTTGTTCTACAGCAGACTTTGGTCTATGACTTAAAAAGGTCAGTATCACTCTCTCGTTTCATTAACTGTTaGCCACACCATTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: FVLQQTLVYDLKRSVSLSRFINC*PHHSSP
Trigger: TGGAGAGGAATGGTGTGGTCAACAGTTAATGAAACG...AGAGAGTGATACTGACCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp ACACATGTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGGTCTCTCTTGTACATTaGCCCAAACTTATTCCTTCC +
Preference number: 4 (lower is better)
Translates to: THVKITISIPTLEDVQLQVSLVH*PKLIPS
Trigger: GGAAGGAATAAGTTTGGGCCAATGTACAAGAGAGAC...CTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTACATGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp TTTGTTCTACAGCAGACTTTGGTCTATGACTTAAAAAGGTCAGTATCACTCTCTGACTTGAGGCTCATCTaGCTCACACTTCAAAAGTTC +
Preference number: 4 (lower is better)
Translates to: FVLQQTLVYDLKRSVSLSDLRLI*LTLQKF
Trigger: GAACTTTTGAAGTGTGAGCCAGATGAGCCTCAAGTC...AGAGAGTGATACTGACCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp TCCTTTCCTTTCTCTTTGCATAGATTAACATGCGTCAATTTTGTTTCCAACTACAGAAGATACTACTCCTaGCCCACTCGACAATGGAGA +
Preference number: 4 (lower is better)
Translates to: SFPFSLHRLTCVNFVSNYRRYYS*PTRQWR
Trigger: TCTCCATTGTCGAGTGGGCCAGGAGTAGTATCTTCT...GTAGTTGGAAACAAAATTGACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp GGATGTTCAATTGCAGCAAGAATGAACCTTGAGTCAATACATCACCTCATCCTTCTTGTGATGCTATTATaGAATAGTCCACTTGTTGCC +
Preference number: 4 (lower is better)
Translates to: GCSIAARMNLESIHHLILLVMLL*NSPLVA
Trigger: GGCAACAAGTGGACTATTCCATAATAGCATCACAAG...AAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp CTTCTGACCGTGTTGGTATCCATCTGTGAGTTCAATCCACTCCATTACAATGTCAGACTTTCATACCTGTaGCATCGCATGTTAATAATA +
Preference number: 4 (lower is better)
Translates to: LLTVLVSICEFNPLHYNVRLSYL*HRMLII
Trigger: TATTATTAACATGCGATGCCACAGGTATGAAAGTCT...GACATTGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp GGATGTTCAATTGCAGCAAGAATGAACCTTGAGTCAATACATCACCTCATCCTTTGTGTACCCTTCATGTaGATGAGTATTAGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: GCSIAARMNLESIHHLILCVPFM*MSIRGD
Trigger: ATCACCTCTAATACTCATCCACATGAAGGGTACACA...AAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp TCCTTTCCTTTCTCTTTGCATAGATTAACATGCGTCAATTTTGTTTCCAACTACCATACGAACTCTCGTTaGTCAAACTGGAGAGAACGA +
Preference number: 4 (lower is better)
Translates to: SFPFSLHRLTCVNFVSNYHTNSR*SNWRER
Trigger: TCGTTCTCTCCAGTTTGATCAACGAGAGTTCGTATG...GTAGTTGGAAACAAAATTGACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp TTTGTTCTACAGCAGACTTTGGTCTATGACTTAAAAAGGTCAGTATCACTCTCTGTTGGTATCCATCTGTaGGTTCAATCCACTCCATTA +
Preference number: 4 (lower is better)
Translates to: FVLQQTLVYDLKRSVSLSVGIHL*VQSTPL
Trigger: TAATGGAGTGGATTGAACTCACAGATGGATACCAAC...AGAGAGTGATACTGACCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp ACACATGTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGCAATTGCAGCAAGAATaGACCTTGAGTCAATACATC +
Preference number: 4 (lower is better)
Translates to: THVKITISIPTLEDVQLQQLQQE*TLSQYI
Trigger: GATGTATTGACTCAAGGTTCATTCTTGCTGCAATTG...CTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTACATGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp GTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGCAAGAACTTGTTGAGTTTACTTaGAAACCAGAGGAAGCTACA +
Preference number: 4 (lower is better)
Translates to: VKITISIPTLEDVQLQQELVEFT*KPEEAT
Trigger: TGTAGCTTCCTCTGGTTTTCAAGTAAACTCAACAAG...TTCTTGCTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp TTTGTTCTACAGCAGACTTTGGTCTATGACTTAAAAAGGTCAGTATCACTCTCTGTGGATGTTTTGAATTaGAGAGGAAATGGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: FVLQQTLVYDLKRSVSLSVDVLN*RGNGQV
Trigger: GACCTGACCATTTCCTCTGCAATTCAAAACATCCAC...AGAGAGTGATACTGACCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp GTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGCAAGAAAAGCAAGTCTTTCCCTaGACTCTGTACTTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: VKITISIPTLEDVQLQQEKQVFP*TLYFFQ
Trigger: TTGGAAAAAGTACAGAGTCCAGGGAAAGACTTGCTT...TTCTTGCTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000236914.7
CDS-3UTR CCA 90 bp TTTGTTCTACAGCAGACTTTGGTCTATGACTTAAAAAGGTCAGTATCACTCTCTGTCTCTCTTGTACATTaGCCCAAACTTATTCCTTCC +
Preference number: 4 (lower is better)
Translates to: FVLQQTLVYDLKRSVSLSVSLVH*PKLIPS
Trigger: GGAAGGAATAAGTTTGGGCCAATGTACAAGAGAGAC...AGAGAGTGATACTGACCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp TTGTCTCCATCCACATTACACATGCATGATAGAACCGTTTCATTAACTGTTGACCATGCAACATTTCAATaGGAAGGTTATTATAGGGCA +
Preference number: 4 (lower is better)
Translates to: LSPSTLHMHDRTVSLTVDHATFQ*EGYYRA
Trigger: TGCCCTATAATAACCTTCTCATTGAAATGTTGCATG...GTCAACAGTTAATGAAACGGTTCTATCATGCATGTGTAATGTGGATGGAGACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp AAACCTTTATATTTGAGTCTGCTTTTACCGGCAAATCCTGTAATTGATAAGGCAAAATTAGGCTGTTCATaGTTTGGTGGAGCTACCACT +
Preference number: 4 (lower is better)
Translates to: KPLYLSLLLPANPVIDKAKLGCS*FGGATT
Trigger: AGTGGTAGCTCCACCAAATCATGAACAGCCTAATTT...TGCCTTATCAATTACAGGATTTGCCGGTAAAAGCAGACTCAAATATAAAGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp GTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGCAAGAAAGAACTGTGACTATTTaGCATCCTAGCAAAATGTGT +
Preference number: 4 (lower is better)
Translates to: VKITISIPTLEDVQLQQERTVTI*HPSKMC
Trigger: ACACATTTTGCTAGGATGTCAAATAGTCACAGTTCT...TTCTTGCTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp ACACATGTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGAACTACTTAGAACTGTaGCTATTTGACATCCTAGCA +
Preference number: 4 (lower is better)
Translates to: THVKITISIPTLEDVQLQNYLEL*LFDILA
Trigger: TGCTAGGATGTCAAATAGTCACAGTTCTAAGTAGTT...CTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTACATGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp AAATGCCAGGTTACAAATCGGCTAACAATCAACATTAGAGAAACTTCACTTGTCGCAGACTTTGGTCTATaGCTTAAAAAGGTCAGTATC +
Preference number: 4 (lower is better)
Translates to: KCQVTNRLTINIRETSLVADFGL*LKKVSI
Trigger: GATACTGACCTTTTTAAGTCATAGACCAAAGTCTGC...GACAAGTGAAGTTTCTCTAATGTTGATTGTTAGCCGATTTGTAACCTGGCATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp AAATGCCAGGTTACAAATCGGCTAACAATCAACATTAGAGAAACTTCACTTGTCGTTCCTGGCAAGAACTaGCATGACAATATGTATTTC +
Preference number: 4 (lower is better)
Translates to: KCQVTNRLTINIRETSLVVPGKN*HDNMYF
Trigger: GAAATACATATTGTCATGTCAGTTCTTGCCAGGAAC...GACAAGTGAAGTTTCTCTAATGTTGATTGTTAGCCGATTTGTAACCTGGCATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp CATGATAGAACCGTTTCATTAACTGTTGACCACACCATTCCTCTCCATGTATCTATAGGTGTAAGTCCGTaGTTTAAAGACTCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: HDRTVSLTVDHTIPLHVSIGVSP*FKDSCK
Trigger: TTTACAAGAGTCTTTAAAGCACGGACTTACACCTAT...AGATACATGGAGAGGAATGGTGTGGTCAACAGTTAATGAAACGGTTCTATCATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367362.8
CDS-3UTR GCA 90 bp ACACATGTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGTATGCTCTTTTGGCATaGAACATTTCAATGAGAAGG +
Preference number: 4 (lower is better)
Translates to: THVKITISIPTLEDVQLQYALLA*NISMRR
Trigger: CCTTCTCATTGAAATGTTGCATGCCAAAAGAGCATA...CTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTACATGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp TTTGTTCTACAGCAGACTTTGGTCTATGACTTAAAAAGGTCAGTATCACTCTCTTTCCTATTAGCTGTTTaGAGGTCTAAGACACAGACA +
Preference number: 4 (lower is better)
Translates to: FVLQQTLVYDLKRSVSLSFLLAV*RSKTQT
Trigger: TGTCTGTGTCTTAGACCTGCAAACAGCTAATAGGAA...AGAGAGTGATACTGACCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp GTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGCAAGAATATGAAATCCAACAATaGCAAAGCCACATTTCAGCA +
Preference number: 4 (lower is better)
Translates to: VKITISIPTLEDVQLQQEYEIQQ*QSHISA
Trigger: TGCTGAAATGTGGCTTTGGCATTGTTGGATTTCATA...TTCTTGCTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp GGATGTTCAATTGCAGCAAGAATGAACCTTGAGTCAATACATCACCTCATCCTTGTATACAATTTACAATaGTTGGAAAGGAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: GCSIAARMNLESIHHLILVYNLQ*LERKTR
Trigger: CCTGGTTTTCCTTTCCAAGCATTGTAAATTGTATAC...AAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp CATGATAGAACCGTTTCATTAACTGTTGACCACACCATTCCTCTCCATGTATCTTCAATTTGGCAGTTCTaGTTTTCTATACATGTGTAC +
Preference number: 4 (lower is better)
Translates to: HDRTVSLTVDHTIPLHVSSIWQF*FSIHVY
Trigger: GTACACATGTATAGAAAACCAGAACTGCCAAATTGA...AGATACATGGAGAGGAATGGTGTGGTCAACAGTTAATGAAACGGTTCTATCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp AAATGCCAGGTTACAAATCGGCTAACAATCAACATTAGAGAAACTTCACTTGTCCTTGTGATGCTATTATaGAATAGTCCACTTGTTGCC +
Preference number: 4 (lower is better)
Translates to: KCQVTNRLTINIRETSLVLVMLL*NSPLVA
Trigger: GGCAACAAGTGGACTATTCCATAATAGCATCACAAG...GACAAGTGAAGTTTCTCTAATGTTGATTGTTAGCCGATTTGTAACCTGGCATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp CATGATAGAACCGTTTCATTAACTGTTGACCACACCATTCCTCTCCATGTATCTTTAATTAGCGTTACTTaGAGCAGTTCAGAGTACTTT +
Preference number: 4 (lower is better)
Translates to: HDRTVSLTVDHTIPLHVSLISVT*SSSEYF
Trigger: AAAGTACTCTGAACTGCTCCAAGTAACGCTAATTAA...AGATACATGGAGAGGAATGGTGTGGTCAACAGTTAATGAAACGGTTCTATCATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp TCCTTTCCTTTCTCTTTGCATAGATTAACATGCGTCAATTTTGTTTCCAACTACTTATATGGAATCCTCTaGGGCTGTGAAGCCTTTGAT +
Preference number: 4 (lower is better)
Translates to: SFPFSLHRLTCVNFVSNYLYGIL*GCEAFD
Trigger: ATCAAAGGCTTCACAGCCCCAGAGGATTCCATATAA...GTAGTTGGAAACAAAATTGACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
3UTR CAA 72 bp ATTCTTTGTCCTCCCATATTTGTTCTACAGCAGACTTaGGTCTATGACTTAAAAAGGTCAGTATCACTCTCT +
Preference number: 4 (lower is better)
Translates to: ILCPPIFVLQQT*VYDLKRSVSLS
Trigger: AGAGAGTGATACTGACCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAACAAATATGGGAGGACAAAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp TTTGTTCTACAGCAGACTTTGGTCTATGACTTAAAAAGGTCAGTATCACTCTCTCATGCAACATTTCAATaGGAAGGTTATTATAGGGCA +
Preference number: 4 (lower is better)
Translates to: FVLQQTLVYDLKRSVSLSHATFQ*EGYYRA
Trigger: TGCCCTATAATAACCTTCTCATTGAAATGTTGCATG...AGAGAGTGATACTGACCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp TCCTTTCCTTTCTCTTTGCATAGATTAACATGCGTCAATTTTGTTTCCAACTACAACACTTACATAAGATaGGGGATACTGCCTGCATTT +
Preference number: 4 (lower is better)
Translates to: SFPFSLHRLTCVNFVSNYNTYIR*GILPAF
Trigger: AAATGCAGGCAGTATCCCTCATCTTATGTAAGTGTT...GTAGTTGGAAACAAAATTGACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp AAACCTTTATATTTGAGTCTGCTTTTACCGGCAAATCCTGTAATTGATAAGGCAAACACTTACATAAGATaGGGGATACTGCCTGCATTT +
Preference number: 4 (lower is better)
Translates to: KPLYLSLLLPANPVIDKANTYIR*GILPAF
Trigger: AAATGCAGGCAGTATCCCTCATCTTATGTAAGTGTT...TGCCTTATCAATTACAGGATTTGCCGGTAAAAGCAGACTCAAATATAAAGGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp AAACCTTTATATTTGAGTCTGCTTTTACCGGCAAATCCTGTAATTGATAAGGCACTTGTTGAGTTTACTTaGAAACCAGAGGAAGCTACA +
Preference number: 4 (lower is better)
Translates to: KPLYLSLLLPANPVIDKALVEFT*KPEEAT
Trigger: TGTAGCTTCCTCTGGTTTTCAAGTAAACTCAACAAG...TGCCTTATCAATTACAGGATTTGCCGGTAAAAGCAGACTCAAATATAAAGGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp TCCTTTCCTTTCTCTTTGCATAGATTAACATGCGTCAATTTTGTTTCCAACTACGTTCCTGGCAAGAACTaGCATGACAATATGTATTTC +
Preference number: 4 (lower is better)
Translates to: SFPFSLHRLTCVNFVSNYVPGKN*HDNMYF
Trigger: GAAATACATATTGTCATGTCAGTTCTTGCCAGGAAC...GTAGTTGGAAACAAAATTGACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp AAACCTTTATATTTGAGTCTGCTTTTACCGGCAAATCCTGTAATTGATAAGGCATCACACTCTAAACATTaGATGGATTCAAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: KPLYLSLLLPANPVIDKASHSKH*MDSSPR
Trigger: CCTTGGACTTGAATCCATGCAATGTTTAGAGTGTGA...TGCCTTATCAATTACAGGATTTGCCGGTAAAAGCAGACTCAAATATAAAGGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp TCCTTTCCTTTCTCTTTGCATAGATTAACATGCGTCAATTTTGTTTCCAACTACCTTGTGATGCTATTATaGAATAGTCCACTTGTTGCC +
Preference number: 4 (lower is better)
Translates to: SFPFSLHRLTCVNFVSNYLVMLL*NSPLVA
Trigger: GGCAACAAGTGGACTATTCCATAATAGCATCACAAG...GTAGTTGGAAACAAAATTGACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp TTTGTTCTACAGCAGACTTTGGTCTATGACTTAAAAAGGTCAGTATCACTCTCTTCTTCCTTTCCCCTTTaGGGAAGATTTGAATTACTT +
Preference number: 4 (lower is better)
Translates to: FVLQQTLVYDLKRSVSLSSSFPL*GRFELL
Trigger: AAGTAATTCAAATCTTCCCCAAAGGGGAAAGGAAGA...AGAGAGTGATACTGACCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR TCA 90 bp TCCTTTCCTTTCTCTTTGCATAGATTAACATGCGTCAATTTTGTTTCCAACTACTATTGTAGGTACAGCTaGTGCATTCTTGAGAATTGT +
Preference number: 4 (lower is better)
Translates to: SFPFSLHRLTCVNFVSNYYCRYS*CILENC
Trigger: ACAATTCTCAAGAATGCATCAGCTGTACCTACAATA...GTAGTTGGAAACAAAATTGACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp AAACCTTTATATTTGAGTCTGCTTTTACCGGCAAATCCTGTAATTGATAAGGCATCTTCCTTTCCCCTTTaGGGAAGATTTGAATTACTT +
Preference number: 4 (lower is better)
Translates to: KPLYLSLLLPANPVIDKASSFPL*GRFELL
Trigger: AAGTAATTCAAATCTTCCCCAAAGGGGAAAGGAAGA...TGCCTTATCAATTACAGGATTTGCCGGTAAAAGCAGACTCAAATATAAAGGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
3UTR CAA 72 bp TTGAGTCAATACATCACCTCATCCTTTCCTTTCTCTTaGCATAGATTAACATGCGTCAATTTTGTTTCCAAC +
Preference number: 4 (lower is better)
Translates to: LSQYITSSFPFS*HRLTCVNFVSN
Trigger: GTTGGAAACAAAATTGACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGATGAGGTGATGTATTGACTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR GCA 90 bp TCCTTTCCTTTCTCTTTGCATAGATTAACATGCGTCAATTTTGTTTCCAACTACATAGGTGTAAGTCCGTaGTTTAAAGACTCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: SFPFSLHRLTCVNFVSNYIGVSP*FKDSCK
Trigger: TTTACAAGAGTCTTTAAAGCACGGACTTACACCTAT...GTAGTTGGAAACAAAATTGACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236914.7
ENST00000367362.8
CDS-3UTR CCA 90 bp TCCTTTCCTTTCTCTTTGCATAGATTAACATGCGTCAATTTTGTTTCCAACTACTCAATTTGGCAGTTCTaGTTTTCTATACATGTGTAC +
Preference number: 4 (lower is better)
Translates to: SFPFSLHRLTCVNFVSNYSIWQF*FSIHVY
Trigger: GTACACATGTATAGAAAACCAGAACTGCCAAATTGA...GTAGTTGGAAACAAAATTGACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CCA 90 bp TCCTTTCCTTTCTCTTTGCATAGATTAACATGCGTCAATTTTGTTTCCAACTACTTAATTAGCGTTACTTaGAGCAGTTCAGAGTACTTT +
Preference number: 4 (lower is better)
Translates to: SFPFSLHRLTCVNFVSNYLISVT*SSSEYF
Trigger: AAAGTACTCTGAACTGCTCCAAGTAACGCTAATTAA...GTAGTTGGAAACAAAATTGACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS GCA 90 bp CCCGTGCGCGCGCAGTCCGCGTCTCCGGCCCGAGCGCGCTCTAGCTaGGGCCCCGGACGCGGAACCGGAGCTGCGCGGAGCTGCCGGGAA +
Preference number: 5 (lower is better)
Translates to: PVRAQSASPARARSS*GPGRGTGAARSCRE
Trigger: TTCCCGGCAGCTCCGCGCAGCTCCGGTTCCGCGTCCGGGGCCGCAGCTAGAGCGCGCTCGGGCCGGAGACGCGGACTGCGCGCGCACGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS GCA 90 bp CGCTCTAGCTGCGGCCCCGGACGCGGAACCGGAGCTGCGCGGAGCTaGCGGGAAGGACTCCTTGCCTGCGCACCGCGGCGGTTCTGCCCG +
Preference number: 5 (lower is better)
Translates to: RSSCGPGRGTGAARS*REGLLACAPRRFCP
Trigger: CGGGCAGAACCGCCGCGGTGCGCAGGCAAGGAGTCCTTCCCGGCAGCTCCGCGCAGCTCCGGTTCCGCGTCCGGGGCCGCAGCTAGAGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS GCA 90 bp CTCCCGACCCAGCTCAACTCTATTTTGGCAGCGGCCAGCTGGGGCTaGGCGCAGCAGGAGCCCAAGACCGCCCGCGCGGGCGCGAGCCCC +
Preference number: 5 (lower is better)
Translates to: LPTQLNSILAAASWG*AQQEPKTARAGASP
Trigger: GGGGCTCGCGCCCGCGCGGGCGGTCTTGGGCTCCTGCTGCGCGCAGCCCCAGCTGGCCGCTGCCAAAATAGAGTTGAGCTGGGTCGGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS CCA 90 bp CGTGGTCTCCCGACCCAGCTCAACTCTATTTTGGCAGCGGCCAGCTaGGGCTGCGCGCAGCAGGAGCCCAAGACCGCCCGCGCGGGCGCG +
Preference number: 5 (lower is better)
Translates to: RGLPTQLNSILAAAS*GCAQQEPKTARAGA
Trigger: CGCGCCCGCGCGGGCGGTCTTGGGCTCCTGCTGCGCGCAGCCCCAGCTGGCCGCTGCCAAAATAGAGTTGAGCTGGGTCGGGAGACCACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS TCA 90 bp GCGATCGAGCCAGTCCCAGGGCTTCCGTCTCCACTTTGGGCAGCATaGCAAGGCGACCGCGGGCGGGGATGGGGGATCCGTGTCGGTCCG +
Preference number: 5 (lower is better)
Translates to: AIEPVPGLPSPLWAA*QGDRGRGWGIRVGP
Trigger: CGGACCGACACGGATCCCCCATCCCCGCCCGCGGTCGCCTTGTCATGCTGCCCAAAGTGGAGACGGAAGCCCTGGGACTGGCTCGATCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000447034.1
CDS GCA 90 bp CGGACGCGGAACCGGAGCTGCGCGGAGCTGCCGGGAAGGACTCCTTaGCTGCGCACCGCGGCGGTTCTGCCCGACGAAAAAGATGCGAAA +
Preference number: 5 (lower is better)
Translates to: RTRNRSCAELPGRTP*LRTAAVLPDEKDAK
Trigger: TTTCGCATCTTTTTCGTCGGGCAGAACCGCCGCGGTGCGCAGGCAAGGAGTCCTTCCCGGCAGCTCCGCGCAGCTCCGGTTCCGCGTCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS CCA 90 bp GAGGGATCGGCGTGCGTGGTCTCCCGACCCAGCTCAACTCTATTTTaGCAGCGGCCAGCTGGGGCTGCGCGCAGCAGGAGCCCAAGACCG +
Preference number: 5 (lower is better)
Translates to: EGSACVVSRPSSTLF*QRPAGAARSRSPRP
Trigger: CGGTCTTGGGCTCCTGCTGCGCGCAGCCCCAGCTGGCCGCTGCCAAAATAGAGTTGAGCTGGGTCGGGAGACCACGCACGCCGATCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS GCA 90 bp CGCGGAACCGGAGCTGCGCGGAGCTGCCGGGAAGGACTCCTTGCCTaGGCACCGCGGCGGTTCTGCCCGACGAAAAAGATGCGAAATGGT +
Preference number: 5 (lower is better)
Translates to: RGTGAARSCREGLLA*APRRFCPTKKMRNG
Trigger: ACCATTTCGCATCTTTTTCGTCGGGCAGAACCGCCGCGGTGCGCAGGCAAGGAGTCCTTCCCGGCAGCTCCGCGCAGCTCCGGTTCCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS GCA 90 bp AAGTTAAACAGAAATCAGGCCGCCACGACGCGCGGCGCGGCTCACTaGCGGGATCGGGTAACCGCCTTGCTCCGGACGCAGACCCACGAA +
Preference number: 5 (lower is better)
Translates to: KLNRNQAATTRGAAH*RDRVTALLRTQTHE
Trigger: TTCGTGGGTCTGCGTCCGGAGCAAGGCGGTTACCCGATCCCGGCAGTGAGCCGCGCCGCGCGTCGTGGCGGCCTGATTTCTGTTTAACTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544748.5
CDS-3UTR CAA 90 bp ATTCACCCATGGGGTGTGGGGGAGACTGTGAGGGATCGGCGTGCGTGGTCTCCCTACCGCCTCGGTCCCTaGCGATGTGAGTTGCGCGTG +
Preference number: 5 (lower is better)
Translates to: IHPWGVGETVRDRRAWSPYRLGP*RCELRV
Trigger: CACGCGCAACTCACATCGCAAGGGACCGAGGCGGTA...GGGAGACCACGCACGCCGATCCCTCACAGTCTCCCCCACACCCCATGGGTGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS GCA 90 bp CGGAGCTGCCGGGAAGGACTCCTTGCCTGCGCACCGCGGCGGTTCTaGCCGACGAAAAAGATGCGAAATGGTTGTGTGCTGCTCTCTCAT +
Preference number: 5 (lower is better)
Translates to: RSCREGLLACAPRRF*PTKKMRNGCVLLSH
Trigger: ATGAGAGAGCAGCACACAACCATTTCGCATCTTTTTCGTCGGGCAGAACCGCCGCGGTGCGCAGGCAAGGAGTCCTTCCCGGCAGCTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR CAA 90 bp AGTCTCGCTGAGGCCAGGGGAGAGCCTTCTTCGGTACTTTTCTTGAGGTTTAGTGCCGGGAAGGACTCCTaGCCTGCGCACCGCGGCGGT +
Preference number: 5 (lower is better)
Translates to: SLAEARGEPSSVLFLRFSAGKDS*PAHRGG
Trigger: ACCGCCGCGGTGCGCAGGCAAGGAGTCCTTCCCGGC...ACTAAACCTCAAGAAAAGTACCGAAGAAGGCTCTCCCCTGGCCTCAGCGAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR CAA 90 bp AGCCCTCTGCGGTGGGACCGATTCCAGAGCTGCAGGTGTTCTCTGTTTACGCTCCAGCTCAACTCTATTTaGGCAGCGGCCAGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: SPLRWDRFQSCRCSLFTLQLNSI*AAASWG
Trigger: GCCCCAGCTGGCCGCTGCCAAAATAGAGTTGAGCTG...GAGCGTAAACAGAGAACACCTGCAGCTCTGGAATCGGTCCCACCGCAGAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR CAA 90 bp AGCAGCCCCTTATGGGCTGGACCGACAGTCCTCCGGTTCCCAGCCCTCTGCGGTAAATTGACTGGAATTTaGTTATCCCGGAATCCGGCG +
Preference number: 5 (lower is better)
Translates to: SSPLWAGPTVLRFPALCGKLTGI*LSRNPA
Trigger: CGCCGGATTCCGGGATAACAAAATTCCAGTCAATTT...ACCGCAGAGGGCTGGGAACCGGAGGACTGTCGGTCCAGCCCATAAGGGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS GCA 90 bp GACTCCTTGCCTGCGCACCGCGGCGGTTCTGCCCGACGAAAAAGATaGGAAATGGTTGTGTGCTGCTCTCTCATCTTTCTTGTGCCTGTA +
Preference number: 5 (lower is better)
Translates to: DSLPAHRGGSARRKR*EMVVCCSLIFLVPV
Trigger: TACAGGCACAAGAAAGATGAGAGAGCAGCACACAACCATTTCGCATCTTTTTCGTCGGGCAGAACCGCCGCGGTGCGCAGGCAAGGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR CAA 90 bp CTCCGGTTCCCAGCCCTCTGCGGTGGGACCGATTCCAGAGCTGCAGGTGTTCTCGCTCTCTCATCTTTCTaGTGCCTGTATTTTCTGTGT +
Preference number: 5 (lower is better)
Translates to: LRFPALCGGTDSRAAGVLALSSF*CLYFLC
Trigger: ACACAGAAAATACAGGCACAAGAAAGATGAGAGAGC...GAGAACACCTGCAGCTCTGGAATCGGTCCCACCGCAGAGGGCTGGGAACCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR CAA 90 bp GAGTGTACCGCCTCGGTCCCTTGCGATGTGAGTTGCGCGTGCGGTAGCTGGAAATCTTCGGTACTTTTCTaGAGGTTTAGTCCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: ECTASVPCDVSCACGSWKSSVLF*RFSPQQ
Trigger: CTGCTGGGGACTAAACCTCAAGAAAAGTACCGAAGA...TTTCCAGCTACCGCACGCGCAACTCACATCGCAAGGGACCGAGGCGGTACACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR CAA 90 bp CCCTCTGCGGTGGGACCGATTCCAGAGCTGCAGGTGTTCTCTGTTTACGCTCAGTCAAATTTCGTGGCCTaGGGAAGGACACATCAGACT +
Preference number: 5 (lower is better)
Translates to: PSAVGPIPELQVFSVYAQSNFVA*GRTHQT
Trigger: AGTCTGATGTGTCCTTCCCAAGGCCACGAAATTTGA...CTGAGCGTAAACAGAGAACACCTGCAGCTCTGGAATCGGTCCCACCGCAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR CAA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGTTCAGAGGTAGGCCTTaGGAGGCAGAGTGGATGTTT +
Preference number: 5 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRFRGRP*EAEWMF
Trigger: AAACATCCACTCTGCCTCCAAAGGCCTACCTCTGAA...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGAAAGTGGCCATATGTTaGGTAACCTTGCAGGCTGCC +
Preference number: 5 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRKVAIC*VTLQAA
Trigger: GGCAGCCTGCAAGGTTACCAAACATATGGCCACTTT...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGTCGGTTAGCCTGCTCTaGCTGCAAATAGGCCATGAT +
Preference number: 5 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRSVSLL*LQIGHD
Trigger: ATCATGGCCTATTTGCAGCAAGAGCAGGCTAACCGA...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp GAGTGTACCGCCTCGGTCCCTTGCGATGTGAGTTGCGCGTGCGGTAGCTGGAAAAAAGATGCGAAATGGTaGTGTGCTGCTCTCTCATCT +
Preference number: 5 (lower is better)
Translates to: ECTASVPCDVSCACGSWKKDAKW*CAALSS
Trigger: AGATGAGAGAGCAGCACACAACCATTTCGCATCTTT...TTTCCAGCTACCGCACGCGCAACTCACATCGCAAGGGACCGAGGCGGTACACTC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS CCA 90 bp TGCCTGCGCACCGCGGCGGTTCTGCCCGACGAAAAAGATGCGAAATaGTTGTGTGCTGCTCTCTCATCTTTCTTGTGCCTGTATTTTCTG +
Preference number: 5 (lower is better)
Translates to: CLRTAAVLPDEKDAK*LCAALSSFLCLYFL
Trigger: CAGAAAATACAGGCACAAGAAAGATGAGAGAGCAGCACACAACCATTTCGCATCTTTTTCGTCGGGCAGAACCGCCGCGGTGCGCAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR CAA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGGGAATAGTCCACTTGTaGCCCAGTAACCAGGAAGAT +
Preference number: 5 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRGIVHL*PSNQED
Trigger: ATCTTCCTGGTTACTGGGCAACAAGTGGACTATTCC...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGGGAGAGAACGAAGTTTaGCCACTAACTCCTGTGCAT +
Preference number: 5 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRGENEV*PLTPVH
Trigger: ATGCACAGGAGTTAGTGGCAAAACTTCGTTCTCTCC...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp AAGATAACACGGGTGACTGAGACTGCGCATGAGTCAACGCCCAGCTTACCTAATGCGGGTAGTTACACATaGTGTAGTCCAGCAGGGCGG +
Preference number: 5 (lower is better)
Translates to: KITRVTETAHESTPSLPNAGSYT*CSPAGR
Trigger: CCGCCCTGCTGGACTACACAATGTGTAACTACCCGC...ATTAGGTAAGCTGGGCGTTGACTCATGCGCAGTCTCAGTCACCCGTGTTATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGGGGGCTGTGAAGCCTTaGATTCACAGTTTGCAATAC +
Preference number: 5 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRGAVKP*IHSLQY
Trigger: GTATTGCAAACTGTGAATCAAAGGCTTCACAGCCCC...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGATCGGCGATTTTGCATaGTCCTTTGAGCCACGAAGA +
Preference number: 5 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRIGDFA*SFEPRR
Trigger: TCTTCGTGGCTCAAAGGACAATGCAAAATCGCCGAT...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS TCA 90 bp ATTGCAGAGGAAATGGTCAGGTCAGAGGGCATAGCTTGGATCACCTaGGACATGGCTTCTAGCTTAAGTCCATTGGCTCGGATGAGGGCT +
Preference number: 5 (lower is better)
Translates to: IAEEMVRSEGIAWIT*DMASSLSPLARMRA
Trigger: AGCCCTCATCCGAGCCAATGGACTTAAGCTAGAAGCCATGTCTCAGGTGATCCAAGCTATGCCCTCTGACCTGACCATTTCCTCTGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236914.7
ENST00000367357.3
ENST00000367362.8
ENST00000544748.5
CDS TCA 90 bp GCAGCATGGTTCAGAGGTAGGCCTTTGGAGGCAGAGTGGATGTTTTaGATTGCAGAGGAAATGGTCAGGTCAGAGGGCATAGCTTGGATC +
Preference number: 5 (lower is better)
Translates to: AAWFRGRPLEAEWMF*IAEEMVRSEGIAWI
Trigger: GATCCAAGCTATGCCCTCTGACCTGACCATTTCCTCTGCAATTCAAAACATCCACTCTGCCTCCAAAGGCCTACCTCTGAACCATGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236914.7
ENST00000367357.3
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGAGTGGATGTTTTGAATaGCAGAGGAAATGGTCAGGT +
Preference number: 5 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRSGCFE*QRKWSG
Trigger: ACCTGACCATTTCCTCTGCAATTCAAAACATCCACT...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp TTGCTTATCAGCTCCTGTCGTTGGTGTGATCAGCAGTGTGGATGTAACCCGCTGTTCAGAGGTAGGCCTTaGGAGGCAGAGTGGATGTTT +
Preference number: 5 (lower is better)
Translates to: LLISSCRWCDQQCGCNPLFRGRP*EAEWMF
Trigger: AAACATCCACTCTGCCTCCAAAGGCCTACCTCTGAA...CAGCGGGTTACATCCACACTGCTGATCACACCAACGACAGGAGCTGATAAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp TTGCTTATCAGCTCCTGTCGTTGGTGTGATCAGCAGTGTGGATGTAACCCGCTGTCGGTTAGCCTGCTCTaGCTGCAAATAGGCCATGAT +
Preference number: 5 (lower is better)
Translates to: LLISSCRWCDQQCGCNPLSVSLL*LQIGHD
Trigger: ATCATGGCCTATTTGCAGCAAGAGCAGGCTAACCGA...CAGCGGGTTACATCCACACTGCTGATCACACCAACGACAGGAGCTGATAAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGACCGCTTTTGCTATTTaGTTATATCACAGATCCCCC +
Preference number: 5 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRTAFAI*LYHRSP
Trigger: GGGGGATCTGTGATATAACAAAATAGCAAAAGCGGT...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp AGTCTCGCTGAGGCCAGGGGAGAGCCTTCTTCGGTACTTTTCTTGAGGTTTAGTATGTGTGAGCAAACCTaGCAGCTTTCACAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: SLAEARGEPSSVLFLRFSMCEQT*QLSQVR
Trigger: CCTCACCTGTGAAAGCTGCAAGGTTTGCTCACACAT...ACTAAACCTCAAGAAAAGTACCGAAGAAGGCTCTCCCCTGGCCTCAGCGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR CAA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGATTCACCATTTTAAATaGAGACACTCGAGATCGCCC +
Preference number: 5 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRIHHFK*RHSRSP
Trigger: GGGCGATCTCGAGTGTCTCAATTTAAAATGGTGAAT...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544748.5
CDS TCA 90 bp CTCCTGTGCATGACTCATGAGGTTGTTGAGGGTGGCTCCGGCTTGTaGTGCTATTATGGAATAGTCCACTTGTTGCCCAGTAACCAGGAA +
Preference number: 5 (lower is better)
Translates to: LLCMTHEVVEGGSGL*CYYGIVHLLPSNQE
Trigger: TTCCTGGTTACTGGGCAACAAGTGGACTATTCCATAATAGCATCACAAGCCGGAGCCACCCTCAACAACCTCATGAGTCATGCACAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp ACAAGAACCGTTCTGTCCGTTTTTCTTCTGACCGTGTTGGTATCCATCTGTGAGGTCAGAGGGCATAGCTaGGATCACCTGAGACATGGC +
Preference number: 5 (lower is better)
Translates to: TRTVLSVFLLTVLVSICEVRGHS*DHLRHG
Trigger: GCCATGTCTCAGGTGATCCAAGCTATGCCCTCTGAC...CTCACAGATGGATACCAACACGGTCAGAAGAAAAACGGACAGAACGGTTCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGGTCAGAGGGCATAGCTaGGATCACCTGAGACATGGC +
Preference number: 5 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMVRGHS*DHLRHG
Trigger: GCCATGTCTCAGGTGATCCAAGCTATGCCCTCTGAC...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp ACAAGAACCGTTCTGTCCGTTTTTCTTCTGACCGTGTTGGTATCCATCTGTGAGATATGTTTGGTAACCTaGCAGGCTGCCGTGAGGGGG +
Preference number: 5 (lower is better)
Translates to: TRTVLSVFLLTVLVSICEICLVT*QAAVRG
Trigger: CCCCCTCACGGCAGCCTGCAAGGTTACCAAACATAT...CTCACAGATGGATACCAACACGGTCAGAAGAAAAACGGACAGAACGGTTCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGTCAGATGTGGGATGCTaGCTGGAGAGCTCGTCTGGT +
Preference number: 5 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMSDVGC*LESSSG
Trigger: ACCAGACGAGCTCTCCAGCAAGCATCCCACATCTGA...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp TTGCTTATCAGCTCCTGTCGTTGGTGTGATCAGCAGTGTGGATGTAACCCGCTGCTTTCCATGTACCACTaGTCGGTAAATGTGGTCGAG +
Preference number: 5 (lower is better)
Translates to: LLISSCRWCDQQCGCNPLLSMYH*SVNVVE
Trigger: CTCGACCACATTTACCGACAAGTGGTACATGGAAAG...CAGCGGGTTACATCCACACTGCTGATCACACCAACGACAGGAGCTGATAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp GTCCTTAGTACAGATTCGGTGACCACAGGGCAGAGGTGCTGGGGCCTTCAAAGGATGAGATTCCCGTTTTaGATTTTAGTGTCTCACGAC +
Preference number: 5 (lower is better)
Translates to: VLSTDSVTTGQRCWGLQRMRFPF*ILVSHD
Trigger: GTCGTGAGACACTAAAATCAAAAACGGGAATCTCAT...CCTTTGAAGGCCCCAGCACCTCTGCCCTGTGGTCACCGAATCTGTACTAAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp CCAGAGCTGCAGGTGTTCTCTGTTTACGCTCAGAGTGTACCGCCTCGGTCCCTTTTGAGACACGGCAAATaGACTGGAATTTTGTTATCC +
Preference number: 5 (lower is better)
Translates to: PELQVFSVYAQSVPPRSLLRHGK*TGILLS
Trigger: GGATAACAAAATTCCAGTCAATTTGCCGTGTCTCAA...AAGGGACCGAGGCGGTACACTCTGAGCGTAAACAGAGAACACCTGCAGCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR CAA 90 bp TTGTCTCCATCCACATTACACATGCATGATAGAACCGTTTCATTAACTGTTGACGATCGGGTAACCGCCTaGCTCCGGACGCAGACCCAC +
Preference number: 5 (lower is better)
Translates to: LSPSTLHMHDRTVSLTVDDRVTA*LRTQTH
Trigger: GTGGGTCTGCGTCCGGAGCAAGGCGGTTACCCGATC...GTCAACAGTTAATGAAACGGTTCTATCATGCATGTGTAATGTGGATGGAGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544748.5
CDS GCA 90 bp CACCGCGGCGGTTCTGCCCGACGAAAAAGATGCGAAATGGTTGTGTaGTGCTCTCTCATCTTTCTTGTGCCTGTATTTTCTGTGTTATCA +
Preference number: 5 (lower is better)
Translates to: HRGGSARRKRCEMVV*CSLIFLVPVFSVLS
Trigger: TGATAACACAGAAAATACAGGCACAAGAAAGATGAGAGAGCAGCACACAACCATTTCGCATCTTTTTCGTCGGGCAGAACCGCCGCGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR CAA 90 bp AAGATAACACGGGTGACTGAGACTGCGCATGAGTCAACGCCCAGCTTACCTAATGGGGCTGTGAAGCCTTaGATTCACAGTTTGCAATAC +
Preference number: 5 (lower is better)
Translates to: KITRVTETAHESTPSLPNGAVKP*IHSLQY
Trigger: GTATTGCAAACTGTGAATCAAAGGCTTCACAGCCCC...ATTAGGTAAGCTGGGCGTTGACTCATGCGCAGTCTCAGTCACCCGTGTTATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp AGTCTCGCTGAGGCCAGGGGAGAGCCTTCTTCGGTACTTTTCTTGAGGTTTAGTAAAGAAAAGTGCAGCTaGTCAAATTTCGTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: SLAEARGEPSSVLFLRFSKEKCS*SNFVAL
Trigger: CAAGGCCACGAAATTTGACAAGCTGCACTTTTCTTT...ACTAAACCTCAAGAAAAGTACCGAAGAAGGCTCTCCCCTGGCCTCAGCGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR CAA 90 bp AAGATAACACGGGTGACTGAGACTGCGCATGAGTCAACGCCCAGCTTACCTAATCGCTTTCTCTGTGTTTaGTCAATTTGGCAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: KITRVTETAHESTPSLPNRFLCV*SIWQFW
Trigger: CCAGAACTGCCAAATTGACAAAACACAGAGAAAGCG...ATTAGGTAAGCTGGGCGTTGACTCATGCGCAGTCTCAGTCACCCGTGTTATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp TTGCTTATCAGCTCCTGTCGTTGGTGTGATCAGCAGTGTGGATGTAACCCGCTGAGTGGATGTTTTGAATaGCAGAGGAAATGGTCAGGT +
Preference number: 5 (lower is better)
Translates to: LLISSCRWCDQQCGCNPLSGCFE*QRKWSG
Trigger: ACCTGACCATTTCCTCTGCAATTCAAAACATCCACT...CAGCGGGTTACATCCACACTGCTGATCACACCAACGACAGGAGCTGATAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp ACAAGAACCGTTCTGTCCGTTTTTCTTCTGACCGTGTTGGTATCCATCTGTGAGAAAGTGGCCATATGTTaGGTAACCTTGCAGGCTGCC +
Preference number: 5 (lower is better)
Translates to: TRTVLSVFLLTVLVSICEKVAIC*VTLQAA
Trigger: GGCAGCCTGCAAGGTTACCAAACATATGGCCACTTT...CTCACAGATGGATACCAACACGGTCAGAAGAAAAACGGACAGAACGGTTCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp ACAAGAACCGTTCTGTCCGTTTTTCTTCTGACCGTGTTGGTATCCATCTGTGAGGATTTTAGCCTGGACTaGAGGCTCATCTGGCTCACA +
Preference number: 5 (lower is better)
Translates to: TRTVLSVFLLTVLVSICEDFSLD*RLIWLT
Trigger: TGTGAGCCAGATGAGCCTCAAGTCCAGGCTAAAATC...CTCACAGATGGATACCAACACGGTCAGAAGAAAAACGGACAGAACGGTTCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGGATTTTAGCCTGGACTaGAGGCTCATCTGGCTCACA +
Preference number: 5 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMDFSLD*RLIWLT
Trigger: TGTGAGCCAGATGAGCCTCAAGTCCAGGCTAAAATC...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp CTTCTGACCGTGTTGGTATCCATCTGTGAGTTCAATCCACTCCATTACAATGTCCTCAGCTTTTCGTGCTaGCTTCGGTTAGCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: LLTVLVSICEFNPLHYNVLSFSC*LRLACS
Trigger: AGAGCAGGCTAACCGAAGCAAGCACGAAAAGCTGAG...GACATTGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp GGATGTTCAATTGCAGCAAGAATGAACCTTGAGTCAATACATCACCTCATCCTTGCGGGTAGTTACACATaGTGTAGTCCAGCAGGGCGG +
Preference number: 5 (lower is better)
Translates to: GCSIAARMNLESIHHLILAGSYT*CSPAGR
Trigger: CCGCCCTGCTGGACTACACAATGTGTAACTACCCGC...AAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp TTGCTTATCAGCTCCTGTCGTTGGTGTGATCAGCAGTGTGGATGTAACCCGCTGACCGCTTTTGCTATTTaGTTATATCACAGATCCCCC +
Preference number: 5 (lower is better)
Translates to: LLISSCRWCDQQCGCNPLTAFAI*LYHRSP
Trigger: GGGGGATCTGTGATATAACAAAATAGCAAAAGCGGT...CAGCGGGTTACATCCACACTGCTGATCACACCAACGACAGGAGCTGATAAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp CTTCTGACCGTGTTGGTATCCATCTGTGAGTTCAATCCACTCCATTACAATGTCGGCTGTGACGCTTTCTaGCTTATCAGCTCCTGTCGT +
Preference number: 5 (lower is better)
Translates to: LLTVLVSICEFNPLHYNVGCDAF*LISSCR
Trigger: ACGACAGGAGCTGATAAGCAAGAAAGCGTCACAGCC...GACATTGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp CTTCTGACCGTGTTGGTATCCATCTGTGAGTTCAATCCACTCCATTACAATGTCCTTCACTTGTCAACCTaGGGTGAACAGACGCTGGCT +
Preference number: 5 (lower is better)
Translates to: LLTVLVSICEFNPLHYNVLHLST*GEQTLA
Trigger: AGCCAGCGTCTGTTCACCCAAGGTTGACAAGTGAAG...GACATTGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS CCA 90 bp TTGCTGCAAATAGGCCATGATTTTAGCCTGGACTTGAGGCTCATCTaGCTCACACTTCAAAAGTTCCAGTATCAGATGTGGGATGCTTGC +
Preference number: 5 (lower is better)
Translates to: LLQIGHDFSLDLRLI*LTLQKFQYQMWDAC
Trigger: GCAAGCATCCCACATCTGATACTGGAACTTTTGAAGTGTGAGCCAGATGAGCCTCAAGTCCAGGCTAAAATCATGGCCTATTTGCAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236914.7
ENST00000367357.3
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp GGATGTTCAATTGCAGCAAGAATGAACCTTGAGTCAATACATCACCTCATCCTTATATGTTTGGTAACCTaGCAGGCTGCCGTGAGGGGG +
Preference number: 5 (lower is better)
Translates to: GCSIAARMNLESIHHLILICLVT*QAAVRG
Trigger: CCCCCTCACGGCAGCCTGCAAGGTTACCAAACATAT...AAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGGGAGAGAACGAAGTTTaGCCACTAACTCCTGTGCAT +
Preference number: 5 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMGENEV*PLTPVH
Trigger: ATGCACAGGAGTTAGTGGCAAAACTTCGTTCTCTCC...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp AAGATAACACGGGTGACTGAGACTGCGCATGAGTCAACGCCCAGCTTACCTAATATTTTGCATTGTCCTTaGAGCCACGAAGATAACACG +
Preference number: 5 (lower is better)
Translates to: KITRVTETAHESTPSLPNILHCP*SHEDNT
Trigger: CGTGTTATCTTCGTGGCTCAAAGGACAATGCAAAAT...ATTAGGTAAGCTGGGCGTTGACTCATGCGCAGTCTCAGTCACCCGTGTTATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS GCA 90 bp GCTCATCTGGCTCACACTTCAAAAGTTCCAGTATCAGATGTGGGATaGTTGCTGGAGAGCTCGTCTGGTAACTATCCATATATGAATAGC +
Preference number: 5 (lower is better)
Translates to: AHLAHTSKVPVSDVG*LLESSSGNYPYMNS
Trigger: GCTATTCATATATGGATAGTTACCAGACGAGCTCTCCAGCAAGCATCCCACATCTGATACTGGAACTTTTGAAGTGTGAGCCAGATGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236914.7
ENST00000367357.3
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp CTTCTGACCGTGTTGGTATCCATCTGTGAGTTCAATCCACTCCATTACAATGTCTCAAATTTCGTGGCCTaGGGAAGGACACATCAGACT +
Preference number: 5 (lower is better)
Translates to: LLTVLVSICEFNPLHYNVSNFVA*GRTHQT
Trigger: AGTCTGATGTGTCCTTCCCAAGGCCACGAAATTTGA...GACATTGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236914.7
ENST00000367362.8
CDS-3UTR CAA 90 bp GTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGCAAGAAATATGTTTGGTAACCTaGCAGGCTGCCGTGAGGGGG +
Preference number: 5 (lower is better)
Translates to: VKITISIPTLEDVQLQQEICLVT*QAAVRG
Trigger: CCCCCTCACGGCAGCCTGCAAGGTTACCAAACATAT...TTCTTGCTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp ACACATGTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGTCAGATGTGGGATGCTaGCTGGAGAGCTCGTCTGGT +
Preference number: 5 (lower is better)
Translates to: THVKITISIPTLEDVQLQSDVGC*LESSSG
Trigger: ACCAGACGAGCTCTCCAGCAAGCATCCCACATCTGA...CTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTACATGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp CTTCTGACCGTGTTGGTATCCATCTGTGAGTTCAATCCACTCCATTACAATGTCGGAATAGTCCACTTGTaGCCCAGTAACCAGGAAGAT +
Preference number: 5 (lower is better)
Translates to: LLTVLVSICEFNPLHYNVGIVHL*PSNQED
Trigger: ATCTTCCTGGTTACTGGGCAACAAGTGGACTATTCC...GACATTGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp ACACATGTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGCAGGGCGGCATTGACTaGTTCCTGGACACCTTCTAC +
Preference number: 5 (lower is better)
Translates to: THVKITISIPTLEDVQLQQGGID*FLDTFY
Trigger: GTAGAAGGTGTCCAGGAACAAGTCAATGCCGCCCTG...CTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTACATGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp GGATGTTCAATTGCAGCAAGAATGAACCTTGAGTCAATACATCACCTCATCCTTTTCAGAGGTAGGCCTTaGGAGGCAGAGTGGATGTTT +
Preference number: 5 (lower is better)
Translates to: GCSIAARMNLESIHHLILFRGRP*EAEWMF
Trigger: AAACATCCACTCTGCCTCCAAAGGCCTACCTCTGAA...AAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp AAATGCCAGGTTACAAATCGGCTAACAATCAACATTAGAGAAACTTCACTTGTCTCAGATGTGGGATGCTaGCTGGAGAGCTCGTCTGGT +
Preference number: 5 (lower is better)
Translates to: KCQVTNRLTINIRETSLVSDVGC*LESSSG
Trigger: ACCAGACGAGCTCTCCAGCAAGCATCCCACATCTGA...GACAAGTGAAGTTTCTCTAATGTTGATTGTTAGCCGATTTGTAACCTGGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp ACAAGAACCGTTCTGTCCGTTTTTCTTCTGACCGTGTTGGTATCCATCTGTGAGCTGAAGCAGCTTCATTaGGTCATCAACCTTAAGTTC +
Preference number: 5 (lower is better)
Translates to: TRTVLSVFLLTVLVSICELKQLH*VINLKF
Trigger: GAACTTAAGGTTGATGACCAAATGAAGCTGCTTCAG...CTCACAGATGGATACCAACACGGTCAGAAGAAAAACGGACAGAACGGTTCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGCTGAAGCAGCTTCATTaGGTCATCAACCTTAAGTTC +
Preference number: 5 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMLKQLH*VINLKF
Trigger: GAACTTAAGGTTGATGACCAAATGAAGCTGCTTCAG...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp TTTGTTCTACAGCAGACTTTGGTCTATGACTTAAAAAGGTCAGTATCACTCTCTCAGGGCGGCATTGACTaGTTCCTGGACACCTTCTAC +
Preference number: 5 (lower is better)
Translates to: FVLQQTLVYDLKRSVSLSQGGID*FLDTFY
Trigger: GTAGAAGGTGTCCAGGAACAAGTCAATGCCGCCCTG...AGAGAGTGATACTGACCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp AAACCTTTATATTTGAGTCTGCTTTTACCGGCAAATCCTGTAATTGATAAGGCAGCGGGTAGTTACACATaGTGTAGTCCAGCAGGGCGG +
Preference number: 5 (lower is better)
Translates to: KPLYLSLLLPANPVIDKAAGSYT*CSPAGR
Trigger: CCGCCCTGCTGGACTACACAATGTGTAACTACCCGC...TGCCTTATCAATTACAGGATTTGCCGGTAAAAGCAGACTCAAATATAAAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp CTTCTGACCGTGTTGGTATCCATCTGTGAGTTCAATCCACTCCATTACAATGTCTTTCTTCTGACCGTGTaGGTATCCATCTGTGAGTTC +
Preference number: 5 (lower is better)
Translates to: LLTVLVSICEFNPLHYNVFLLTV*VSICEF
Trigger: GAACTCACAGATGGATACCAACACGGTCAGAAGAAA...GACATTGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp GTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGCAAGAAGGCTGTGACGCTTTCTaGCTTATCAGCTCCTGTCGT +
Preference number: 5 (lower is better)
Translates to: VKITISIPTLEDVQLQQEGCDAF*LISSCR
Trigger: ACGACAGGAGCTGATAAGCAAGAAAGCGTCACAGCC...TTCTTGCTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp TTGTCTCCATCCACATTACACATGCATGATAGAACCGTTTCATTAACTGTTGACCTTCACTTGTCAACCTaGGGTGAACAGACGCTGGCT +
Preference number: 5 (lower is better)
Translates to: LSPSTLHMHDRTVSLTVDLHLST*GEQTLA
Trigger: AGCCAGCGTCTGTTCACCCAAGGTTGACAAGTGAAG...GTCAACAGTTAATGAAACGGTTCTATCATGCATGTGTAATGTGGATGGAGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp TTTAAATTGAGACACGGCAAATTGACTGGAATTTTGTTATCCCGGAATCCGGCGACAGTTCTTCCAGGGTaGCAGAGAAAAGTGCAACAG +
Preference number: 5 (lower is better)
Translates to: FKLRHGKLTGILLSRNPATVLPG*QRKVQQ
Trigger: CTGTTGCACTTTTCTCTGCAACCCTGGAAGAACTGT...CGCCGGATTCCGGGATAACAAAATTCCAGTCAATTTGCCGTGTCTCAATTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS-3UTR CAA 90 bp CTTCTGACCGTGTTGGTATCCATCTGTGAGTTCAATCCACTCCATTACAATGTCAAAGAAAAGTGCAGCTaGTCAAATTTCGTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: LLTVLVSICEFNPLHYNVKEKCS*SNFVAL
Trigger: CAAGGCCACGAAATTTGACAAGCTGCACTTTTCTTT...GACATTGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236914.7
ENST00000367362.8
CDS-3UTR CAA 90 bp AAACCTTTATATTTGAGTCTGCTTTTACCGGCAAATCCTGTAATTGATAAGGCAGTCAGAGGGCATAGCTaGGATCACCTGAGACATGGC +
Preference number: 5 (lower is better)
Translates to: KPLYLSLLLPANPVIDKAVRGHS*DHLRHG
Trigger: GCCATGTCTCAGGTGATCCAAGCTATGCCCTCTGAC...TGCCTTATCAATTACAGGATTTGCCGGTAAAAGCAGACTCAAATATAAAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp ACACATGTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGAAAGTGGCCATATGTTaGGTAACCTTGCAGGCTGCC +
Preference number: 5 (lower is better)
Translates to: THVKITISIPTLEDVQLQKVAIC*VTLQAA
Trigger: GGCAGCCTGCAAGGTTACCAAACATATGGCCACTTT...CTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTACATGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp ACACATGTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGTCGGTTAGCCTGCTCTaGCTGCAAATAGGCCATGAT +
Preference number: 5 (lower is better)
Translates to: THVKITISIPTLEDVQLQSVSLL*LQIGHD
Trigger: ATCATGGCCTATTTGCAGCAAGAGCAGGCTAACCGA...CTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTACATGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp GGATGTTCAATTGCAGCAAGAATGAACCTTGAGTCAATACATCACCTCATCCTTGGAGAGAACGAAGTTTaGCCACTAACTCCTGTGCAT +
Preference number: 5 (lower is better)
Translates to: GCSIAARMNLESIHHLILGENEV*PLTPVH
Trigger: ATGCACAGGAGTTAGTGGCAAAACTTCGTTCTCTCC...AAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp TCCTTTCCTTTCTCTTTGCATAGATTAACATGCGTCAATTTTGTTTCCAACTACCAGGGCGGCATTGACTaGTTCCTGGACACCTTCTAC +
Preference number: 5 (lower is better)
Translates to: SFPFSLHRLTCVNFVSNYQGGID*FLDTFY
Trigger: GTAGAAGGTGTCCAGGAACAAGTCAATGCCGCCCTG...GTAGTTGGAAACAAAATTGACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp GGATGTTCAATTGCAGCAAGAATGAACCTTGAGTCAATACATCACCTCATCCTTGGGGCTGTGAAGCCTTaGATTCACAGTTTGCAATAC +
Preference number: 5 (lower is better)
Translates to: GCSIAARMNLESIHHLILGAVKP*IHSLQY
Trigger: GTATTGCAAACTGTGAATCAAAGGCTTCACAGCCCC...AAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGACAGCTGATGCATTCTaGAGAATTGTTTCAGTTCAG +
Preference number: 5 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMTADAF*RIVSVQ
Trigger: CTGAACTGAAACAATTCTCAAGAATGCATCAGCTGT...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp ACAAGAACCGTTCTGTCCGTTTTTCTTCTGACCGTGTTGGTATCCATCTGTGAGTCCTTTCCTTTCTCTTaGCATAGATTAACATGCGTC +
Preference number: 5 (lower is better)
Translates to: TRTVLSVFLLTVLVSICESFPFS*HRLTCV
Trigger: GACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA...CTCACAGATGGATACCAACACGGTCAGAAGAAAAACGGACAGAACGGTTCTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp ATTCCTCTCCATGTATCTTCTAGCCAACTTGTTTTTCAGCTGGGGAGGGCAATGTTTAAATTGAGACACTaGCATGTTTTCCGGCATCTG +
Preference number: 5 (lower is better)
Translates to: IPLHVSSSQLVFQLGRAMFKLRH*HVFRHL
Trigger: CAGATGCCGGAAAACATGCAAGTGTCTCAATTTAAA...CATTGCCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATACATGGAGAGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367362.8
CDS-3UTR CAA 90 bp ACAAGAACCGTTCTGTCCGTTTTTCTTCTGACCGTGTTGGTATCCATCTGTGAGATGAGATTCCCGTTTTaGATTTTAGTGTCTCACGAC +
Preference number: 5 (lower is better)
Translates to: TRTVLSVFLLTVLVSICEMRFPF*ILVSHD
Trigger: GTCGTGAGACACTAAAATCAAAAACGGGAATCTCAT...CTCACAGATGGATACCAACACGGTCAGAAGAAAAACGGACAGAACGGTTCTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp CTTCTGACCGTGTTGGTATCCATCTGTGAGTTCAATCCACTCCATTACAATGTCTTAGAGAAACTTCACTaGTCAACCTTGGGTGAACAG +
Preference number: 5 (lower is better)
Translates to: LLTVLVSICEFNPLHYNVLEKLH*STLGEQ
Trigger: CTGTTCACCCAAGGTTGACAAGTGAAGTTTCTCTAA...GACATTGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp CATGATAGAACCGTTTCATTAACTGTTGACCACACCATTCCTCTCCATGTATCTCGCTTTCTCTGTGTTTaGTCAATTTGGCAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: HDRTVSLTVDHTIPLHVSRFLCV*SIWQFW
Trigger: CCAGAACTGCCAAATTGACAAAACACAGAGAAAGCG...AGATACATGGAGAGGAATGGTGTGGTCAACAGTTAATGAAACGGTTCTATCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp GTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGCAAGAATCTAGCTTAAGTCCATaGGCTCGGATGAGGGCTTTT +
Preference number: 5 (lower is better)
Translates to: VKITISIPTLEDVQLQQESSLSP*ARMRAF
Trigger: AAAAGCCCTCATCCGAGCCAATGGACTTAAGCTAGA...TTCTTGCTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp TTGTCTCCATCCACATTACACATGCATGATAGAACCGTTTCATTAACTGTTGACTCTAGCTTAAGTCCATaGGCTCGGATGAGGGCTTTT +
Preference number: 5 (lower is better)
Translates to: LSPSTLHMHDRTVSLTVDSSLSP*ARMRAF
Trigger: AAAAGCCCTCATCCGAGCCAATGGACTTAAGCTAGA...GTCAACAGTTAATGAAACGGTTCTATCATGCATGTGTAATGTGGATGGAGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp TCCTTTCCTTTCTCTTTGCATAGATTAACATGCGTCAATTTTGTTTCCAACTACCTCAGCTTTTCGTGCTaGCTTCGGTTAGCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: SFPFSLHRLTCVNFVSNYLSFSC*LRLACS
Trigger: AGAGCAGGCTAACCGAAGCAAGCACGAAAAGCTGAG...GTAGTTGGAAACAAAATTGACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp AAACCTTTATATTTGAGTCTGCTTTTACCGGCAAATCCTGTAATTGATAAGGCACTCAGCTTTTCGTGCTaGCTTCGGTTAGCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: KPLYLSLLLPANPVIDKALSFSC*LRLACS
Trigger: AGAGCAGGCTAACCGAAGCAAGCACGAAAAGCTGAG...TGCCTTATCAATTACAGGATTTGCCGGTAAAAGCAGACTCAAATATAAAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp CTTCTGACCGTGTTGGTATCCATCTGTGAGTTCAATCCACTCCATTACAATGTCACAGCTGATGCATTCTaGAGAATTGTTTCAGTTCAG +
Preference number: 5 (lower is better)
Translates to: LLTVLVSICEFNPLHYNVTADAF*RIVSVQ
Trigger: CTGAACTGAAACAATTCTCAAGAATGCATCAGCTGT...GACATTGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp CTTCTGACCGTGTTGGTATCCATCTGTGAGTTCAATCCACTCCATTACAATGTCTCCTTTCCTTTCTCTTaGCATAGATTAACATGCGTC +
Preference number: 5 (lower is better)
Translates to: LLTVLVSICEFNPLHYNVSFPFS*HRLTCV
Trigger: GACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA...GACATTGTAATGGAGTGGATTGAACTCACAGATGGATACCAACACGGTCAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp ACAAGAACCGTTCTGTCCGTTTTTCTTCTGACCGTGTTGGTATCCATCTGTGAGCAAAAACCTTTATATTaGAGTCTGCTTTTACCGGCA +
Preference number: 5 (lower is better)
Translates to: TRTVLSVFLLTVLVSICEQKPLY*SLLLPA
Trigger: TGCCGGTAAAAGCAGACTCAAATATAAAGGTTTTTG...CTCACAGATGGATACCAACACGGTCAGAAGAAAAACGGACAGAACGGTTCTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS TCA 90 bp TCTAAACTAAAGAGCACCAAGAATTTCAGACATACGAACTCTCGTTaGTCAAACTGGAGAGAACGAAGTTTTGCCACTAACTCCTGTGCA +
Preference number: 5 (lower is better)
Translates to: SKLKSTKNFRHTNSR*SNWRERSFATNSCA
Trigger: TGCACAGGAGTTAGTGGCAAAACTTCGTTCTCTCCAGTTTGATCAACGAGAGTTCGTATGTCTGAAATTCTTGGTGCTCTTTAGTTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp AAACCTTTATATTTGAGTCTGCTTTTACCGGCAAATCCTGTAATTGATAAGGCAGATTTTAGCCTGGACTaGAGGCTCATCTGGCTCACA +
Preference number: 5 (lower is better)
Translates to: KPLYLSLLLPANPVIDKADFSLD*RLIWLT
Trigger: TGTGAGCCAGATGAGCCTCAAGTCCAGGCTAAAATC...TGCCTTATCAATTACAGGATTTGCCGGTAAAAGCAGACTCAAATATAAAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp AAATGCCAGGTTACAAATCGGCTAACAATCAACATTAGAGAAACTTCACTTGTCCTTTCCATGTACCACTaGTCGGTAAATGTGGTCGAG +
Preference number: 5 (lower is better)
Translates to: KCQVTNRLTINIRETSLVLSMYH*SVNVVE
Trigger: CTCGACCACATTTACCGACAAGTGGTACATGGAAAG...GACAAGTGAAGTTTCTCTAATGTTGATTGTTAGCCGATTTGTAACCTGGCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp GTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGCAAGAATATGGAATAGTCCACTaGTTGCCCAGTAACCAGGAA +
Preference number: 5 (lower is better)
Translates to: VKITISIPTLEDVQLQQEYGIVH*LPSNQE
Trigger: TTCCTGGTTACTGGGCAACAAGTGGACTATTCCATA...TTCTTGCTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp TTGTCTCCATCCACATTACACATGCATGATAGAACCGTTTCATTAACTGTTGACTATGGAATAGTCCACTaGTTGCCCAGTAACCAGGAA +
Preference number: 5 (lower is better)
Translates to: LSPSTLHMHDRTVSLTVDYGIVH*LPSNQE
Trigger: TTCCTGGTTACTGGGCAACAAGTGGACTATTCCATA...GTCAACAGTTAATGAAACGGTTCTATCATGCATGTGTAATGTGGATGGAGACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp ACACATGTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGACATACGAACTCTCGTaGATCAAACTGGAGAGAACG +
Preference number: 5 (lower is better)
Translates to: THVKITISIPTLEDVQLQTYELS*IKLERT
Trigger: CGTTCTCTCCAGTTTGATCAACGAGAGTTCGTATGT...CTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTACATGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp TTGTCTCCATCCACATTACACATGCATGATAGAACCGTTTCATTAACTGTTGACTTTCTTCTGACCGTGTaGGTATCCATCTGTGAGTTC +
Preference number: 5 (lower is better)
Translates to: LSPSTLHMHDRTVSLTVDFLLTV*VSICEF
Trigger: GAACTCACAGATGGATACCAACACGGTCAGAAGAAA...GTCAACAGTTAATGAAACGGTTCTATCATGCATGTGTAATGTGGATGGAGACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp ACACATGTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGTTTCTTCTGACCGTGTaGGTATCCATCTGTGAGTTC +
Preference number: 5 (lower is better)
Translates to: THVKITISIPTLEDVQLQFLLTV*VSICEF
Trigger: GAACTCACAGATGGATACCAACACGGTCAGAAGAAA...CTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTACATGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp GGATGTTCAATTGCAGCAAGAATGAACCTTGAGTCAATACATCACCTCATCCTTTTTGTCCTCCCATATTaGTTCTACAGCAGACTTTGG +
Preference number: 5 (lower is better)
Translates to: GCSIAARMNLESIHHLILFVLPY*FYSRLW
Trigger: CCAAAGTCTGCTGTAGAACAAATATGGGAGGACAAA...AAGGATGAGGTGATGTATTGACTCAAGGTTCATTCTTGCTGCAATTGAACATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp TTTGTTCTACAGCAGACTTTGGTCTATGACTTAAAAAGGTCAGTATCACTCTCTATCGGCGATTTTGCATaGTCCTTTGAGCCACGAAGA +
Preference number: 5 (lower is better)
Translates to: FVLQQTLVYDLKRSVSLSIGDFA*SFEPRR
Trigger: TCTTCGTGGCTCAAAGGACAATGCAAAATCGCCGAT...AGAGAGTGATACTGACCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp AAATGCCAGGTTACAAATCGGCTAACAATCAACATTAGAGAAACTTCACTTGTCGTTCTCTGTAATGCTTaGGGTATGAGCTCTGATCGG +
Preference number: 5 (lower is better)
Translates to: KCQVTNRLTINIRETSLVVLCNA*GMSSDR
Trigger: CCGATCAGAGCTCATACCCAAAGCATTACAGAGAAC...GACAAGTGAAGTTTCTCTAATGTTGATTGTTAGCCGATTTGTAACCTGGCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp AAATGCCAGGTTACAAATCGGCTAACAATCAACATTAGAGAAACTTCACTTGTCTATCTTCTAGCCAACTaGTTTTTCAGCTGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: KCQVTNRLTINIRETSLVYLLAN*FFSWGG
Trigger: CCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATA...GACAAGTGAAGTTTCTCTAATGTTGATTGTTAGCCGATTTGTAACCTGGCATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp GTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGCAAGAAAAAGAAAAGTGCAGCTaGTCAAATTTCGTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: VKITISIPTLEDVQLQQEKEKCS*SNFVAL
Trigger: CAAGGCCACGAAATTTGACAAGCTGCACTTTTCTTT...TTCTTGCTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000236914.7
ENST00000367362.8
CDS-3UTR CAA 90 bp TTTGTTCTACAGCAGACTTTGGTCTATGACTTAAAAAGGTCAGTATCACTCTCTCGCTTTCTCTGTGTTTaGTCAATTTGGCAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: FVLQQTLVYDLKRSVSLSRFLCV*SIWQFW
Trigger: CCAGAACTGCCAAATTGACAAAACACAGAGAAAGCG...AGAGAGTGATACTGACCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp ACACATGTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGCTGAAGCAGCTTCATTaGGTCATCAACCTTAAGTTC +
Preference number: 5 (lower is better)
Translates to: THVKITISIPTLEDVQLQLKQLH*VINLKF
Trigger: GAACTTAAGGTTGATGACCAAATGAAGCTGCTTCAG...CTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTACATGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp TCCTTTCCTTTCTCTTTGCATAGATTAACATGCGTCAATTTTGTTTCCAACTACCTTTCCATGTACCACTaGTCGGTAAATGTGGTCGAG +
Preference number: 5 (lower is better)
Translates to: SFPFSLHRLTCVNFVSNYLSMYH*SVNVVE
Trigger: CTCGACCACATTTACCGACAAGTGGTACATGGAAAG...GTAGTTGGAAACAAAATTGACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp TCCTTTCCTTTCTCTTTGCATAGATTAACATGCGTCAATTTTGTTTCCAACTACGGAATAGTCCACTTGTaGCCCAGTAACCAGGAAGAT +
Preference number: 5 (lower is better)
Translates to: SFPFSLHRLTCVNFVSNYGIVHL*PSNQED
Trigger: ATCTTCCTGGTTACTGGGCAACAAGTGGACTATTCC...GTAGTTGGAAACAAAATTGACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp TTTGTTCTACAGCAGACTTTGGTCTATGACTTAAAAAGGTCAGTATCACTCTCTACATACGAACTCTCGTaGATCAAACTGGAGAGAACG +
Preference number: 5 (lower is better)
Translates to: FVLQQTLVYDLKRSVSLSTYELS*IKLERT
Trigger: CGTTCTCTCCAGTTTGATCAACGAGAGTTCGTATGT...AGAGAGTGATACTGACCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp AAACCTTTATATTTGAGTCTGCTTTTACCGGCAAATCCTGTAATTGATAAGGCAGTTCTCTGTAATGCTTaGGGTATGAGCTCTGATCGG +
Preference number: 5 (lower is better)
Translates to: KPLYLSLLLPANPVIDKAVLCNA*GMSSDR
Trigger: CCGATCAGAGCTCATACCCAAAGCATTACAGAGAAC...TGCCTTATCAATTACAGGATTTGCCGGTAAAAGCAGACTCAAATATAAAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp AAACCTTTATATTTGAGTCTGCTTTTACCGGCAAATCCTGTAATTGATAAGGCATATCTTCTAGCCAACTaGTTTTTCAGCTGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: KPLYLSLLLPANPVIDKAYLLAN*FFSWGG
Trigger: CCCTCCCCAGCTGAAAAACAAGTTGGCTAGAAGATA...TGCCTTATCAATTACAGGATTTGCCGGTAAAAGCAGACTCAAATATAAAGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp ACACATGTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGTTAGAGAAACTTCACTaGTCAACCTTGGGTGAACAG +
Preference number: 5 (lower is better)
Translates to: THVKITISIPTLEDVQLQLEKLH*STLGEQ
Trigger: CTGTTCACCCAAGGTTGACAAGTGAAGTTTCTCTAA...CTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTACATGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp TTTGTTCTACAGCAGACTTTGGTCTATGACTTAAAAAGGTCAGTATCACTCTCTAGTGGATGTTTTGAATaGCAGAGGAAATGGTCAGGT +
Preference number: 5 (lower is better)
Translates to: FVLQQTLVYDLKRSVSLSSGCFE*QRKWSG
Trigger: ACCTGACCATTTCCTCTGCAATTCAAAACATCCACT...AGAGAGTGATACTGACCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp TCCTTTCCTTTCTCTTTGCATAGATTAACATGCGTCAATTTTGTTTCCAACTACACATACGAACTCTCGTaGATCAAACTGGAGAGAACG +
Preference number: 5 (lower is better)
Translates to: SFPFSLHRLTCVNFVSNYTYELS*IKLERT
Trigger: CGTTCTCTCCAGTTTGATCAACGAGAGTTCGTATGT...GTAGTTGGAAACAAAATTGACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp ACACATGTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGACAGCTGATGCATTCTaGAGAATTGTTTCAGTTCAG +
Preference number: 5 (lower is better)
Translates to: THVKITISIPTLEDVQLQTADAF*RIVSVQ
Trigger: CTGAACTGAAACAATTCTCAAGAATGCATCAGCTGT...CTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTACATGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp GTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGCAAGAAGTTCTACAGCAGACTTaGGTCTATGACTTAAAAAGG +
Preference number: 5 (lower is better)
Translates to: VKITISIPTLEDVQLQQEVLQQT*VYDLKR
Trigger: CCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAAC...TTCTTGCTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp TTTGTTCTACAGCAGACTTTGGTCTATGACTTAAAAAGGTCAGTATCACTCTCTATTTTGCATTGTCCTTaGAGCCACGAAGATAACACG +
Preference number: 5 (lower is better)
Translates to: FVLQQTLVYDLKRSVSLSILHCP*SHEDNT
Trigger: CGTGTTATCTTCGTGGCTCAAAGGACAATGCAAAAT...AGAGAGTGATACTGACCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp CATGATAGAACCGTTTCATTAACTGTTGACCACACCATTCCTCTCCATGTATCTCAAAAACCTTTATATTaGAGTCTGCTTTTACCGGCA +
Preference number: 5 (lower is better)
Translates to: HDRTVSLTVDHTIPLHVSQKPLY*SLLLPA
Trigger: TGCCGGTAAAAGCAGACTCAAATATAAAGGTTTTTG...AGATACATGGAGAGGAATGGTGTGGTCAACAGTTAATGAAACGGTTCTATCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp TCCTTTCCTTTCTCTTTGCATAGATTAACATGCGTCAATTTTGTTTCCAACTACTTTGTCCTCCCATATTaGTTCTACAGCAGACTTTGG +
Preference number: 5 (lower is better)
Translates to: SFPFSLHRLTCVNFVSNYFVLPY*FYSRLW
Trigger: CCAAAGTCTGCTGTAGAACAAATATGGGAGGACAAA...GTAGTTGGAAACAAAATTGACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp GTAAAAATCACCATTTCCATCCCAACTCTTGAGGATGTTCAATTGCAGCAAGAAAGAATTTGCGATTCTTaGTCCTCCCATATTTGTTCT +
Preference number: 5 (lower is better)
Translates to: VKITISIPTLEDVQLQQERICDS*SSHICS
Trigger: AGAACAAATATGGGAGGACAAAGAATCGCAAATTCT...TTCTTGCTGCAATTGAACATCCTCAAGAGTTGGGATGGAAATGGTGATTTTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp AAATGCCAGGTTACAAATCGGCTAACAATCAACATTAGAGAAACTTCACTTGTCGTAACTTATGCTCTTTaGGCATGCAACATTTCAATG +
Preference number: 5 (lower is better)
Translates to: KCQVTNRLTINIRETSLVVTYAL*ACNISM
Trigger: CATTGAAATGTTGCATGCCAAAAGAGCATAAGTTAC...GACAAGTGAAGTTTCTCTAATGTTGATTGTTAGCCGATTTGTAACCTGGCATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp TCCTTTCCTTTCTCTTTGCATAGATTAACATGCGTCAATTTTGTTTCCAACTACTCCTTTCCTTTCTCTTaGCATAGATTAACATGCGTC +
Preference number: 5 (lower is better)
Translates to: SFPFSLHRLTCVNFVSNYSFPFS*HRLTCV
Trigger: GACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA...GTAGTTGGAAACAAAATTGACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp AAACCTTTATATTTGAGTCTGCTTTTACCGGCAAATCCTGTAATTGATAAGGCAGTTCTACAGCAGACTTaGGTCTATGACTTAAAAAGG +
Preference number: 5 (lower is better)
Translates to: KPLYLSLLLPANPVIDKAVLQQT*VYDLKR
Trigger: CCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAAC...TGCCTTATCAATTACAGGATTTGCCGGTAAAAGCAGACTCAAATATAAAGGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp TCCTTTCCTTTCTCTTTGCATAGATTAACATGCGTCAATTTTGTTTCCAACTACGTTCTACAGCAGACTTaGGTCTATGACTTAAAAAGG +
Preference number: 5 (lower is better)
Translates to: SFPFSLHRLTCVNFVSNYVLQQT*VYDLKR
Trigger: CCTTTTTAAGTCATAGACCAAAGTCTGCTGTAGAAC...GTAGTTGGAAACAAAATTGACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS-3UTR CAA 90 bp TCCTTTCCTTTCTCTTTGCATAGATTAACATGCGTCAATTTTGTTTCCAACTACGTAACTTATGCTCTTTaGGCATGCAACATTTCAATG +
Preference number: 5 (lower is better)
Translates to: SFPFSLHRLTCVNFVSNYVTYAL*ACNISM
Trigger: CATTGAAATGTTGCATGCCAAAAGAGCATAAGTTAC...GTAGTTGGAAACAAAATTGACGCATGTTAATCTATGCAAAGAGAAAGGAAAGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS GCA 72 bp GCGCAGTCCGCGTCTCCGGCCCGAGCGCGCTCTAGCTaGGGCCCCGGACGCGGAACCGGAGCTGCGCGGAGC +
Preference number: 6 (lower is better)
Translates to: AQSASPARARSS*GPGRGTGAARS
Trigger: GCTCCGCGCAGCTCCGGTTCCGCGTCCGGGGCCGCAGCTAGAGCGCGCTCGGGCCGGAGACGCGGACTGCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS GCA 72 bp TGCGGCCCCGGACGCGGAACCGGAGCTGCGCGGAGCTaGCGGGAAGGACTCCTTGCCTGCGCACCGCGGCGG +
Preference number: 6 (lower is better)
Translates to: CGPGRGTGAARS*REGLLACAPRR
Trigger: CCGCCGCGGTGCGCAGGCAAGGAGTCCTTCCCGGCAGCTCCGCGCAGCTCCGGTTCCGCGTCCGGGGCCGCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS GCA 72 bp CAGCTCAACTCTATTTTGGCAGCGGCCAGCTGGGGCTaGGCGCAGCAGGAGCCCAAGACCGCCCGCGCGGGC +
Preference number: 6 (lower is better)
Translates to: QLNSILAAASWG*AQQEPKTARAG
Trigger: GCCCGCGCGGGCGGTCTTGGGCTCCTGCTGCGCGCAGCCCCAGCTGGCCGCTGCCAAAATAGAGTTGAGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS GCA 72 bp AGAAATCAGGCCGCCACGACGCGCGGCGCGGCTCACTaGCGGGATCGGGTAACCGCCTTGCTCCGGACGCAG +
Preference number: 6 (lower is better)
Translates to: RNQAATTRGAAH*RDRVTALLRTQ
Trigger: CTGCGTCCGGAGCAAGGCGGTTACCCGATCCCGGCAGTGAGCCGCGCCGCGCGTCGTGGCGGCCTGATTTCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544748.5
CDS CAA 72 bp CGCGGCGCGGCTCACTGCCGGGATCGGGTAACCGCCTaGCTCCGGACGCAGACCCACGAAGGCGTCTTCGCA +
Preference number: 6 (lower is better)
Translates to: RGAAHCRDRVTA*LRTQTHEGVFA
Trigger: TGCGAAGACGCCTTCGTGGGTCTGCGTCCGGAGCAAGGCGGTTACCCGATCCCGGCAGTGAGCCGCGCCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544748.5
CDS CAA 90 bp CCGGACGCGGAACCGGAGCTGCGCGGAGCTGCCGGGAAGGACTCCTaGCCTGCGCACCGCGGCGGTTCTGCCCGACGAAAAAGATGCGAA +
Preference number: 6 (lower is better)
Translates to: PDAEPELRGAAGKDS*PAHRGGSARRKRCE
Trigger: TTCGCATCTTTTTCGTCGGGCAGAACCGCCGCGGTGCGCAGGCAAGGAGTCCTTCCCGGCAGCTCCGCGCAGCTCCGGTTCCGCGTCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS CCA 72 bp CCGACCCAGCTCAACTCTATTTTGGCAGCGGCCAGCTaGGGCTGCGCGCAGCAGGAGCCCAAGACCGCCCGC +
Preference number: 6 (lower is better)
Translates to: PTQLNSILAAAS*GCAQQEPKTAR
Trigger: GCGGGCGGTCTTGGGCTCCTGCTGCGCGCAGCCCCAGCTGGCCGCTGCCAAAATAGAGTTGAGCTGGGTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS CAA 90 bp GCCACGACGCGCGGCGCGGCTCACTGCCGGGATCGGGTAACCGCCTaGCTCCGGACGCAGACCCACGAAGGCGTCTTCGCAGCTAAAAAG +
Preference number: 6 (lower is better)
Translates to: ATTRGAAHCRDRVTA*LRTQTHEGVFAAKK
Trigger: CTTTTTAGCTGCGAAGACGCCTTCGTGGGTCTGCGTCCGGAGCAAGGCGGTTACCCGATCCCGGCAGTGAGCCGCGCCGCGCGTCGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544748.5
CDS TCA 72 bp CCAGTCCCAGGGCTTCCGTCTCCACTTTGGGCAGCATaGCAAGGCGACCGCGGGCGGGGATGGGGGATCCGT +
Preference number: 6 (lower is better)
Translates to: PVPGLPSPLWAA*QGDRGRGWGIR
Trigger: ACGGATCCCCCATCCCCGCCCGCGGTCGCCTTGTCATGCTGCCCAAAGTGGAGACGGAAGCCCTGGGACTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000447034.1
CDS GCA 72 bp GGAGCTGCGCGGAGCTGCCGGGAAGGACTCCTTGCCTaGGCACCGCGGCGGTTCTGCCCGACGAAAAAGATG +
Preference number: 6 (lower is better)
Translates to: GAARSCREGLLA*APRRFCPTKKM
Trigger: CATCTTTTTCGTCGGGCAGAACCGCCGCGGTGCGCAGGCAAGGAGTCCTTCCCGGCAGCTCCGCGCAGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS CCA 72 bp GCGTGCGTGGTCTCCCGACCCAGCTCAACTCTATTTTaGCAGCGGCCAGCTGGGGCTGCGCGCAGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: ACVVSRPSSTLF*QRPAGAARSRS
Trigger: GCTCCTGCTGCGCGCAGCCCCAGCTGGCCGCTGCCAAAATAGAGTTGAGCTGGGTCGGGAGACCACGCACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS CAA 72 bp GGCGTGCGTGGTCTCCCGACCCAGCTCAACTCTATTTaGGCAGCGGCCAGCTGGGGCTGCGCGCAGCAGGAG +
Preference number: 6 (lower is better)
Translates to: GVRGLPTQLNSI*AAASWGCAQQE
Trigger: CTCCTGCTGCGCGCAGCCCCAGCTGGCCGCTGCCAAAATAGAGTTGAGCTGGGTCGGGAGACCACGCACGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS CAA 72 bp TGCGATCGAGCCAGTCCCAGGGCTTCCGTCTCCACTTaGGGCAGCATGACAAGGCGACCGCGGGCGGGGATG +
Preference number: 6 (lower is better)
Translates to: CDRASPRASVST*GSMTRRPRAGM
Trigger: CATCCCCGCCCGCGGTCGCCTTGTCATGCTGCCCAAAGTGGAGACGGAAGCCCTGGGACTGGCTCGATCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367362.8
ENST00000447034.1
CDS GCA 72 bp CGGGAAGGACTCCTTGCCTGCGCACCGCGGCGGTTCTaGCCGACGAAAAAGATGCGAAATGGTTGTGTGCTG +
Preference number: 6 (lower is better)
Translates to: REGLLACAPRRF*PTKKMRNGCVL
Trigger: CAGCACACAACCATTTCGCATCTTTTTCGTCGGGCAGAACCGCCGCGGTGCGCAGGCAAGGAGTCCTTCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS GCA 72 bp ACTTGCATGTTTTCCGGCATCTGGCCCTGTTCCCCATaGGATCGAGCCAGTCCCAGGGCTTCCGTCTCCACT +
Preference number: 6 (lower is better)
Translates to: TCMFSGIWPCSP*DRASPRASVST
Trigger: AGTGGAGACGGAAGCCCTGGGACTGGCTCGATCGCATGGGGAACAGGGCCAGATGCCGGAAAACATGCAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367362.8
CDS GCA 72 bp CCTGCGCACCGCGGCGGTTCTGCCCGACGAAAAAGATaGGAAATGGTTGTGTGCTGCTCTCTCATCTTTCTT +
Preference number: 6 (lower is better)
Translates to: PAHRGGSARRKR*EMVVCCSLIFL
Trigger: AAGAAAGATGAGAGAGCAGCACACAACCATTTCGCATCTTTTTCGTCGGGCAGAACCGCCGCGGTGCGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS CAA 72 bp AGACTTGATGGCCCGGCTAGGAAAGTGGCCATATGTTaGGTAACCTTGCAGGCTGCCGTGAGGGGGCATTGT +
Preference number: 6 (lower is better)
Translates to: RLDGPARKVAIC*VTLQAAVRGHC
Trigger: ACAATGCCCCCTCACGGCAGCCTGCAAGGTTACCAAACATATGGCCACTTTCCTAGCCGGGCCATCAAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236914.7
ENST00000367357.3
ENST00000367362.8
ENST00000544748.5
CDS CAA 90 bp AGACTTGATGGCCCGGCTAGGAAAGTGGCCATATGTTTGGTAACCTaGCAGGCTGCCGTGAGGGGGCATTGTCATGCTAATGGGGGATGT +
Preference number: 6 (lower is better)
Translates to: RLDGPARKVAICLVT*QAAVRGHCHANGGC
Trigger: ACATCCCCCATTAGCATGACAATGCCCCCTCACGGCAGCCTGCAAGGTTACCAAACATATGGCCACTTTCCTAGCCGGGCCATCAAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000236914.7
ENST00000367357.3
ENST00000367362.8
ENST00000544748.5
CDS CCA 72 bp ACCGCGGCGGTTCTGCCCGACGAAAAAGATGCGAAATaGTTGTGTGCTGCTCTCTCATCTTTCTTGTGCCTG +
Preference number: 6 (lower is better)
Translates to: TAAVLPDEKDAK*LCAALSSFLCL
Trigger: CAGGCACAAGAAAGATGAGAGAGCAGCACACAACCATTTCGCATCTTTTTCGTCGGGCAGAACCGCCGCGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS CAA 90 bp CCCAAAGGTGCTCAGCTTTTCGTGCTTGCTTCGGTTAGCCTGCTCTaGCTGCAAATAGGCCATGATTTTAGCCTGGACTTGAGGCTCATC +
Preference number: 6 (lower is better)
Translates to: PKGAQLFVLASVSLL*LQIGHDFSLDLRLI
Trigger: GATGAGCCTCAAGTCCAGGCTAAAATCATGGCCTATTTGCAGCAAGAGCAGGCTAACCGAAGCAAGCACGAAAAGCTGAGCACCTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236914.7
ENST00000367357.3
ENST00000367362.8
ENST00000544748.5
CDS TCA 72 bp GAAATGGTCAGGTCAGAGGGCATAGCTTGGATCACCTaGGACATGGCTTCTAGCTTAAGTCCATTGGCTCGG +
Preference number: 6 (lower is better)
Translates to: EMVRSEGIAWIT*DMASSLSPLAR
Trigger: CCGAGCCAATGGACTTAAGCTAGAAGCCATGTCTCAGGTGATCCAAGCTATGCCCTCTGACCTGACCATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236914.7
ENST00000367357.3
ENST00000367362.8
ENST00000544748.5
CDS CAA 72 bp GCGGCGGTTCTGCCCGACGAAAAAGATGCGAAATGGTaGTGTGCTGCTCTCTCATCTTTCTTGTGCCTGTAT +
Preference number: 6 (lower is better)
Translates to: AAVLPDEKDAKW*CAALSSFLCLY
Trigger: ATACAGGCACAAGAAAGATGAGAGAGCAGCACACAACCATTTCGCATCTTTTTCGTCGGGCAGAACCGCCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS TCA 72 bp GGTGCTTGTAGTAGAGGTATTCTTCAGCCTGCATACTaGTGGCCCGGATTTCGGGTAGTCGAAGAAGTAGCT +
Preference number: 6 (lower is better)
Translates to: GACSRGILQPAY*WPGFRVVEEVA
Trigger: AGCTACTTCTTCGACTACCCGAAATCCGGGCCATCAGTATGCAGGCTGAAGAATACCTCTACTACAAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236914.7
ENST00000367362.8
ENST00000544748.5
CDS CAA 72 bp GCTCAGCTTTTCGTGCTTGCTTCGGTTAGCCTGCTCTaGCTGCAAATAGGCCATGATTTTAGCCTGGACTTG +
Preference number: 6 (lower is better)
Translates to: AQLFVLASVSLL*LQIGHDFSLDL
Trigger: CAAGTCCAGGCTAAAATCATGGCCTATTTGCAGCAAGAGCAGGCTAACCGAAGCAAGCACGAAAAGCTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236914.7
ENST00000367357.3
ENST00000367362.8
ENST00000544748.5
CDS TCA 72 bp TTCAGAGGTAGGCCTTTGGAGGCAGAGTGGATGTTTTaGATTGCAGAGGAAATGGTCAGGTCAGAGGGCATA +
Preference number: 6 (lower is better)
Translates to: FRGRPLEAEWMF*IAEEMVRSEGI
Trigger: TATGCCCTCTGACCTGACCATTTCCTCTGCAATTCAAAACATCCACTCTGCCTCCAAAGGCCTACCTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236914.7
ENST00000367357.3
ENST00000367362.8
ENST00000544748.5
CDS GCA 72 bp CGGTCCGGAAGCCCAGCACCAATAGGTGTAAGTCCGTaGTTTAAAGACTCTTGTAAATCCCCAGTATCTGAA +
Preference number: 6 (lower is better)
Translates to: RSGSPAPIGVSP*FKDSCKSPVSE
Trigger: TTCAGATACTGGGGATTTACAAGAGTCTTTAAAGCACGGACTTACACCTATTGGTGCTGGGCTTCCGGACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367362.8
CDS CAA 72 bp ACTACTCCTGGCCCACTCGACAATGGAGAAGAGAGTTaGATCTGCCATTTTGCACATAAGCCCAAAGGTGCT +
Preference number: 6 (lower is better)
Translates to: TTPGPLDNGEES*ICHFAHKPKGA
Trigger: AGCACCTTTGGGCTTATGTGCAAAATGGCAGATCAAACTCTCTTCTCCATTGTCGAGTGGGCCAGGAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236914.7
ENST00000367357.3
ENST00000367362.8
ENST00000544748.5
CDS CAA 90 bp GTTAGCCTGCTCTTGCTGCAAATAGGCCATGATTTTAGCCTGGACTaGAGGCTCATCTGGCTCACACTTCAAAAGTTCCAGTATCAGATG +
Preference number: 6 (lower is better)
Translates to: VSLLLLQIGHDFSLD*RLIWLTLQKFQYQM
Trigger: CATCTGATACTGGAACTTTTGAAGTGTGAGCCAGATGAGCCTCAAGTCCAGGCTAAAATCATGGCCTATTTGCAGCAAGAGCAGGCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236914.7
ENST00000367357.3
ENST00000367362.8
ENST00000544748.5
CDS CCA 72 bp TCGTCTGGTAACTATCCATATATGAATAGCCCATTATaGACTCGGGTGAGCTGGTATAGGGGTCTGGGTACT +
Preference number: 6 (lower is better)
Translates to: SSGNYPYMNSPL*TRVSWYRGLGT
Trigger: AGTACCCAGACCCCTATACCAGCTCACCCGAGTCCATAATGGGCTATTCATATATGGATAGTTACCAGACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236914.7
ENST00000367357.3
ENST00000367362.8
ENST00000544748.5
CDS CCA 72 bp ATCTGGCTCACACTTCAAAAGTTCCAGTATCAGATGTaGGATGCTTGCTGGAGAGCTCGTCTGGTAACTATC +
Preference number: 6 (lower is better)
Translates to: IWLTLQKFQYQM*DACWRARLVTI
Trigger: GATAGTTACCAGACGAGCTCTCCAGCAAGCATCCCACATCTGATACTGGAACTTTTGAAGTGTGAGCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236914.7
ENST00000367357.3
ENST00000367362.8
ENST00000544748.5
CDS CAA 72 bp CTCTTGCTGCAAATAGGCCATGATTTTAGCCTGGACTaGAGGCTCATCTGGCTCACACTTCAAAAGTTCCAG +
Preference number: 6 (lower is better)
Translates to: LLLQIGHDFSLD*RLIWLTLQKFQ
Trigger: CTGGAACTTTTGAAGTGTGAGCCAGATGAGCCTCAAGTCCAGGCTAAAATCATGGCCTATTTGCAGCAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236914.7
ENST00000367357.3
ENST00000367362.8
ENST00000544748.5
CDS CAA 90 bp CATCTGGCTCACACTTCAAAAGTTCCAGTATCAGATGTGGGATGCTaGCTGGAGAGCTCGTCTGGTAACTATCCATATATGAATAGCCCA +
Preference number: 6 (lower is better)
Translates to: HLAHTSKVPVSDVGC*LESSSGNYPYMNSP
Trigger: TGGGCTATTCATATATGGATAGTTACCAGACGAGCTCTCCAGCAAGCATCCCACATCTGATACTGGAACTTTTGAAGTGTGAGCCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236914.7
ENST00000367357.3
ENST00000367362.8
ENST00000544748.5
CDS GCA 72 bp GCTCACACTTCAAAAGTTCCAGTATCAGATGTGGGATaGTTGCTGGAGAGCTCGTCTGGTAACTATCCATAT +
Preference number: 6 (lower is better)
Translates to: AHTSKVPVSDVG*LLESSSGNYPY
Trigger: ATATGGATAGTTACCAGACGAGCTCTCCAGCAAGCATCCCACATCTGATACTGGAACTTTTGAAGTGTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236914.7
ENST00000367357.3
ENST00000367362.8
ENST00000544748.5
CDS GCA 72 bp GGTTCTGCCCGACGAAAAAGATGCGAAATGGTTGTGTaGTGCTCTCTCATCTTTCTTGTGCCTGTATTTTCT +
Preference number: 6 (lower is better)
Translates to: GSARRKRCEMVV*CSLIFLVPVFS
Trigger: AGAAAATACAGGCACAAGAAAGATGAGAGAGCAGCACACAACCATTTCGCATCTTTTTCGTCGGGCAGAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474307.1
CDS CCA 72 bp ATAGGCCATGATTTTAGCCTGGACTTGAGGCTCATCTaGCTCACACTTCAAAAGTTCCAGTATCAGATGTGG +
Preference number: 6 (lower is better)
Translates to: IGHDFSLDLRLI*LTLQKFQYQMW
Trigger: CCACATCTGATACTGGAACTTTTGAAGTGTGAGCCAGATGAGCCTCAAGTCCAGGCTAAAATCATGGCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236914.7
ENST00000367357.3
ENST00000367362.8
ENST00000544748.5
CDS GCA 72 bp CCTGTATTTTCTGTGTTATCAATAGGTGTAAGTCCGTaGTTTAAAGACTCTTGTAAATCCCCAGTATCTGAA +
Preference number: 6 (lower is better)
Translates to: PVFSVLSIGVSP*FKDSCKSPVSE
Trigger: TTCAGATACTGGGGATTTACAAGAGTCTTTAAAGCACGGACTTACACCTATTGATAACACAGAAAATACAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474307.1