RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NR5A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000136931

Ensembl transcript IDs: ENST00000373587.3, ENST00000373588.9, ENST00000455734.1, ENST00000620110.4

Found 346 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGCAGGCACCCCGCCGGGGACAGGAGACAGCCGAGGCCTCTCCCTaGTGCTTCACCCTGCAGAGTGTCCTTCATGACCTAGGACAGGGG +
Preference number: 1 (lower is better)
Translates to: QQAPRRGQETAEASP*CFTLQSVLHDLGQG
Trigger: CCCCTGTCCTAGGTCATGAAGGACACTCTGCAGGGTGAAGCACCAGGGAGAGGCCTCGGCTGTCTCCTGTCCCCGGCGGGGTGCCTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR GCA 90 bp GCAGGGGTGCCCAGTCTCCTCCAACTGGGCAGGCTCAGCACAAGCTaGAACAGTAACATGAAAGCGGGACGGACAGCAGGCACCCCGCCG +
Preference number: 1 (lower is better)
Translates to: AGVPSLLQLGRLSTS*NSNMKAGRTAGTPP
Trigger: CGGCGGGGTGCCTGCTGTCCGTCCCGCTTTCATGTTACTGTTGCAGCTTGTGCTGAGCCTGCCCAGTTGGAGGAGACTGGGCACCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR TCA 90 bp AGCCGAGGCCTCTCCCTGGTGCTTCACCCTGCAGAGTGTCCTTCATaGCCTAGGACAGGGGGTCAGGGAGCTGAGGGCCAGCTTCATGGG +
Preference number: 1 (lower is better)
Translates to: SRGLSLVLHPAECPS*PRTGGQGAEGQLHG
Trigger: CCCATGAAGCTGGCCCTCAGCTCCCTGACCCCCTGTCCTAGGTCATGAAGGACACTCTGCAGGGTGAAGCACCAGGGAGAGGCCTCGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR GCA 90 bp TTGCATTCCCACCCACAGAGACCTGAAGCCCCCAACAGGGCATCCTaGTGTTCACCTAGTGGGTGGAGGGCGGGCAACAGCGCTTCTCTG +
Preference number: 1 (lower is better)
Translates to: LHSHPQRPEAPNRAS*CSPSGWRAGNSASL
Trigger: CAGAGAAGCGCTGTTGCCCGCCCTCCACCCACTAGGTGAACAGCAGGATGCCCTGTTGGGGGCTTCAGGTCTCTGTGGGTGGGAATGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR CCA 90 bp TGTTCACCTAGTGGGTGGAGGGCGGGCAACAGCGCTTCTCTGGATTaGGGCTGGGGCTCAGAAGTAATGACCCAGCACCACCCCAAGGGT +
Preference number: 1 (lower is better)
Translates to: CSPSGWRAGNSASLD*GWGSEVMTQHHPKG
Trigger: ACCCTTGGGGTGGTGCTGGGTCATTACTTCTGAGCCCCAGCCCCAATCCAGAGAAGCGCTGTTGCCCGCCCTCCACCCACTAGGTGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR TCA 90 bp CCCAACGGGTTGGAGCCACAGAGAGGGGATCAACAGCGCTATCCCTaGTCTACAGGCCCGTGCCCCCTCCCAAGTTCACTTGCATTCCCA +
Preference number: 1 (lower is better)
Translates to: PNGLEPQRGDQQRYP*STGPCPLPSSLAFP
Trigger: TGGGAATGCAAGTGAACTTGGGAGGGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTGATCCCCTCTCTGTGGCTCCAACCCGTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR CCA 90 bp GCTGAGGGCCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTaGAGCCACAGAGAGGGGATCAACAGCGCTATCCCTGATCTACAG +
Preference number: 1 (lower is better)
Translates to: AEGQLHGFAARDPTG*SHREGINSAIPDLQ
Trigger: CTGTAGATCAGGGATAGCGCTGTTGATCCCCTCTCTGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGGCCCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR TCA 90 bp TGGAAACTAATTGCGAAATTTATTCCAGGGCTGTGGGGGCTGGGGTaGTCCTTAAGGGCACTTCTCGTTTCAGGGCTGTGGGTCTCCGGC +
Preference number: 1 (lower is better)
Translates to: WKLIAKFIPGLWGLG*SLRALLVSGLWVSG
Trigger: GCCGGAGACCCACAGCCCTGAAACGAGAAGTGCCCTTAAGGATCACCCCAGCCCCCACAGCCCTGGAATAAATTTCGCAATTAGTTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR GCA 90 bp CGGGACGGACAGCAGGCACCCCGCCGGGGACAGGAGACAGCCGAGGCCTCTCCCCCTCCTCCCCGGACCTaGAGGCTTCAGACTCCAGGA +
Preference number: 2 (lower is better)
Translates to: RDGQQAPRRGQETAEASPPPPRT*RLQTPG
Trigger: TCCTGGAGTCTGAAGCCTGCAGGTCCGGGGAGGAGG...GGGAGAGGCCTCGGCTGTCTCCTGTCCCCGGCGGGGTGCCTGCTGTCCGTCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR CCA 90 bp AACAGCCACCTCCTTGGGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCCCTCTGGGACGGGGCTaGGGCTCCTCGGTGGGCATC +
Preference number: 2 (lower is better)
Translates to: NSHLLGALQAAGKCQWPLPLGRG*GSSVGI
Trigger: GATGCCCACCGAGGAGCCCCAGCCCCGTCCCAGAGG...GAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCCCAAGGAGGTGGCTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR CCA 90 bp TGGTGCTTCACCCTGCAGAGTGTCCTTCATGACCTAGGACAGGGGGTCAGGGAGCCTCTGGGACGGGGCTaGGGCTCCTCGGTGGGCATC +
Preference number: 2 (lower is better)
Translates to: WCFTLQSVLHDLGQGVREPLGRG*GSSVGI
Trigger: GATGCCCACCGAGGAGCCCCAGCCCCGTCCCAGAGG...CTCCCTGACCCCCTGTCCTAGGTCATGAAGGACACTCTGCAGGGTGAAGCACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR CAA 90 bp GACCTAGGACAGGGGGTCAGGGAGCTGAGGGCCAGCTTCATGGGTTaGCAGCAAGGGACCCAACGGGTTGGAGCCACAGAGAGGGGATCA +
Preference number: 2 (lower is better)
Translates to: DLGQGVRELRASFMG*QQGTQRVGATERGS
Trigger: TGATCCCCTCTCTGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGGCCCTCAGCTCCCTGACCCCCTGTCCTAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR TCA 90 bp CCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACAGAGAGGGCAACAGCGCTATCCCTaGTCTACAGGCCCGTGCCCC +
Preference number: 2 (lower is better)
Translates to: PASWVCSKGPNGLEPQRGQQRYP*STGPCP
Trigger: GGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTG...CCCTCTCTGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR TCA 90 bp CTGAGGGCCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACACAACAGCGCTATCCCTaGTCTACAGGCCCGTGCCCC +
Preference number: 2 (lower is better)
Translates to: LRASFMGLQQGTQRVGATQQRYP*STGPCP
Trigger: GGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTG...TGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGGCCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR CCA 90 bp TGGTGCTTCACCCTGCAGAGTGTCCTTCATGACCTAGGACAGGGGGTCAGGGAGGCAGGCAAGTGCCAGTaGCCACTCCACCTCCGCCAG +
Preference number: 2 (lower is better)
Translates to: WCFTLQSVLHDLGQGVREAGKCQ*PLHLRQ
Trigger: CTGGCGGAGGTGGAGTGGCCACTGGCACTTGCCTGC...CTCCCTGACCCCCTGTCCTAGGTCATGAAGGACACTCTGCAGGGTGAAGCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR TCA 90 bp AACAGCCACCTCCTTGGGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCGTGGGCATCAGAAAATaGACCATGCGGAGCCAGCGG +
Preference number: 2 (lower is better)
Translates to: NSHLLGALQAAGKCQWPLVGIRK*TMRSQR
Trigger: CCGCTGGCTCCGCATGGTTCATTTTCTGATGCCCAC...GAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCCCAAGGAGGTGGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR GCA 90 bp AATACCAGCCTGGGAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTACCACCTCCTCCCCGGACCTaGAGGCTTCAGACTCCAGGA +
Preference number: 2 (lower is better)
Translates to: NTSLGGPPLGGARMSIVPPPPRT*RLQTPG
Trigger: TCCTGGAGTCTGAAGCCTGCAGGTCCGGGGAGGAGG...TGGTACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTCCCAGGCTGGTATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR GCA 90 bp GCCACAGAGAGGGGATCAACAGCGCTATCCCTGATCTACAGGCCCGTGCCCCCTCCCAACAGGGCATCCTaGTGTTCACCTAGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: ATERGSTALSLIYRPVPPPNRAS*CSPSGW
Trigger: CCACCCACTAGGTGAACAGCAGGATGCCCTGTTGGG...AGGGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTGATCCCCTCTCTGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR CCA 90 bp CTGAGGGCCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACAGCAACAGCGCTTCTCTaGATTGGGGCTGGGGCTCAG +
Preference number: 2 (lower is better)
Translates to: LRASFMGLQQGTQRVGATATALL*IGAGAQ
Trigger: CTGAGCCCCAGCCCCAATCCAGAGAAGCGCTGTTGC...TGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGGCCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR CCA 90 bp GAGAGGGGATCAACAGCGCTATCCCTGATCTACAGGCCCGTGCCCCCTCCCAAGAGCGCTTCTCTGGATTaGGGCTGGGGCTCAGAAGTA +
Preference number: 2 (lower is better)
Translates to: ERGSTALSLIYRPVPPPKSASLD*GWGSEV
Trigger: TACTTCTGAGCCCCAGCCCCAATCCAGAGAAGCGCT...CTTGGGAGGGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTGATCCCCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR CCA 90 bp TGGTGCTTCACCCTGCAGAGTGTCCTTCATGACCTAGGACAGGGGGTCAGGGAGTGTTCACCTAGTGGGTaGAGGGCGGGCAACAGCGCT +
Preference number: 2 (lower is better)
Translates to: WCFTLQSVLHDLGQGVRECSPSG*RAGNSA
Trigger: AGCGCTGTTGCCCGCCCTCCACCCACTAGGTGAACA...CTCCCTGACCCCCTGTCCTAGGTCATGAAGGACACTCTGCAGGGTGAAGCACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR TCA 90 bp GAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTACCAAACGTTCTCCTTGGGAAGGGATGACCTCTaGTCCAAGGGACGTCGAGGC +
Preference number: 2 (lower is better)
Translates to: EGHLWVGLGCRLYQTFSLGRDDL*SKGRRG
Trigger: GCCTCGACGTCCCTTGGATCAGAGGTCATCCCTTCC...CAAGGAGAACGTTTGGTACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR GCA 90 bp GAGAGGGGATCAACAGCGCTATCCCTGATCTACAGGCCCGTGCCCCCTCCCAAGTCAGAAAATGAACCATaGGGAGCCAGCGGTGTGGCT +
Preference number: 2 (lower is better)
Translates to: ERGSTALSLIYRPVPPPKSENEP*GASGVA
Trigger: AGCCACACCGCTGGCTCCGCATGGTTCATTTTCTGA...CTTGGGAGGGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTGATCCCCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR CCA 90 bp GACCTAGGACAGGGGGTCAGGGAGCTGAGGGCCAGCTTCATGGGTTTGCAGCAAGCTGGGGCTCCTCGGTaGGCATCAGAAAATGAACCA +
Preference number: 2 (lower is better)
Translates to: DLGQGVRELRASFMGLQQAGAPR*ASENEP
Trigger: TGGTTCATTTTCTGATGCCCACCGAGGAGCCCCAGC...TTGCTGCAAACCCATGAAGCTGGCCCTCAGCTCCCTGACCCCCTGTCCTAGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR CCA 90 bp GAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTACCAAACGTTCTCCTTGCCCTCCTGGTCTCTATaGGGGGAACACTGGAGACCC +
Preference number: 2 (lower is better)
Translates to: EGHLWVGLGCRLYQTFSLPSWSL*GEHWRP
Trigger: GGGTCTCCAGTGTTCCCCCCATAGAGACCAGGAGGG...CAAGGAGAACGTTTGGTACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR TCA 90 bp ATTTATTCCAGGGCTGTGGGGGCTGGGGTGATCCTTAAGGGCACTTCTCGTTTCAGGGGGTCAGGGAGCTaGGGGCCAGCTTCATGGGTT +
Preference number: 2 (lower is better)
Translates to: IYSRAVGAGVILKGTSRFRGSGS*GPASWV
Trigger: AACCCATGAAGCTGGCCCTCAGCTCCCTGACCCCCT...GAAACGAGAAGTGCCCTTAAGGATCACCCCAGCCCCCACAGCCCTGGAATAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR GCA 90 bp GGGCCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACAGAGACCTCCCAAGTTCACTTaGATTCCCACCCACAGAGAC +
Preference number: 2 (lower is better)
Translates to: GPASWVCSKGPNGLEPQRPPKFT*IPTHRD
Trigger: GTCTCTGTGGGTGGGAATGCAAGTGAACTTGGGAGG...TCTCTGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR CCA 90 bp GCCACAGAGAGGGGATCAACAGCGCTATCCCTGATCTACAGGCCCGTGCCCCCTACCAAACGTTCTCCTTaGGTGGGAGAGGGAATCAGT +
Preference number: 2 (lower is better)
Translates to: ATERGSTALSLIYRPVPPTKRSP*VGEGIS
Trigger: ACTGATTCCCTCTCCCACCCAAGGAGAACGTTTGGT...AGGGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTGATCCCCTCTCTGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR TCA 90 bp ATTTATTCCAGGGCTGTGGGGGCTGGGGTGATCCTTAAGGGCACTTCTCGTTTCGGAAGGGATGACCTCTaGTCCAAGGGACGTCGAGGC +
Preference number: 2 (lower is better)
Translates to: IYSRAVGAGVILKGTSRFGRDDL*SKGRRG
Trigger: GCCTCGACGTCCCTTGGATCAGAGGTCATCCCTTCC...GAAACGAGAAGTGCCCTTAAGGATCACCCCAGCCCCCACAGCCCTGGAATAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR TCA 90 bp CTTAGTAGGCGAGTGTCCGGGGAGAAACCGTCAGCTGTACTTAGTGGCAATCCCGAGAGGAGGAAGGGATaGCCTCTGATCCAAGGGACG +
Preference number: 2 (lower is better)
Translates to: LSRRVSGEKPSAVLSGNPERRKG*PLIQGT
Trigger: CGTCCCTTGGATCAGAGGTCATCCCTTCCTCCTCTC...GGGATTGCCACTAAGTACAGCTGACGGTTTCTCCCCGGACACTCGCCTACTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR TCA 90 bp GACCTAGGACAGGGGGTCAGGGAGCTGAGGGCCAGCTTCATGGGTTTGCAGCAAGGGAGAGGGAATCAGTaGTGCCTGGAGCAAAGTTTT +
Preference number: 2 (lower is better)
Translates to: DLGQGVRELRASFMGLQQGRGNQ*CLEQSF
Trigger: AAAACTTTGCTCCAGGCATCACTGATTCCCTCTCCC...TTGCTGCAAACCCATGAAGCTGGCCCTCAGCTCCCTGACCCCCTGTCCTAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR GCA 90 bp TGGTGCTTCACCCTGCAGAGTGTCCTTCATGACCTAGGACAGGGGGTCAGGGAGTCAGAAAATGAACCATaGGGAGCCAGCGGTGTGGCT +
Preference number: 2 (lower is better)
Translates to: WCFTLQSVLHDLGQGVRESENEP*GASGVA
Trigger: AGCCACACCGCTGGCTCCGCATGGTTCATTTTCTGA...CTCCCTGACCCCCTGTCCTAGGTCATGAAGGACACTCTGCAGGGTGAAGCACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR CCA 90 bp CTTAGTAGGCGAGTGTCCGGGGAGAAACCGTCAGCTGTACTTAGTGGCAATCCCCTTGCAGAGGTCAGGTaGGGTAGAAGGGCTAGGGAG +
Preference number: 2 (lower is better)
Translates to: LSRRVSGEKPSAVLSGNPLAEVR*GRRARE
Trigger: CTCCCTAGCCCTTCTACCCCACCTGACCTCTGCAAG...GGGATTGCCACTAAGTACAGCTGACGGTTTCTCCCCGGACACTCGCCTACTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR TCA 90 bp AGAAACCGTCAGCTGTACTTAGTGGCAATCCCCAAGCCCCAGCTTCAGTCCTCAGTGGGCATCAGAAAATaGACCATGCGGAGCCAGCGG +
Preference number: 2 (lower is better)
Translates to: RNRQLYLVAIPKPQLQSSVGIRK*TMRSQR
Trigger: CCGCTGGCTCCGCATGGTTCATTTTCTGATGCCCAC...TGAGGACTGAAGCTGGGGCTTGGGGATTGCCACTAAGTACAGCTGACGGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR GCA 90 bp TGGTGCTTCACCCTGCAGAGTGTCCTTCATGACCTAGGACAGGGGGTCAGGGAGCCCCTAGTTGATACCTaGTCAACTTCTCCCTGTCTG +
Preference number: 2 (lower is better)
Translates to: WCFTLQSVLHDLGQGVREPLVDT*STSPCL
Trigger: CAGACAGGGAGAAGTTGAGCAGGTATCAACTAGGGG...CTCCCTGACCCCCTGTCCTAGGTCATGAAGGACACTCTGCAGGGTGAAGCACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR CCA 90 bp AGAAACCGTCAGCTGTACTTAGTGGCAATCCCCAAGCCCCAGCTTCAGTCCTCACTTGCAGAGGTCAGGTaGGGTAGAAGGGCTAGGGAG +
Preference number: 2 (lower is better)
Translates to: RNRQLYLVAIPKPQLQSSLAEVR*GRRARE
Trigger: CTCCCTAGCCCTTCTACCCCACCTGACCTCTGCAAG...TGAGGACTGAAGCTGGGGCTTGGGGATTGCCACTAAGTACAGCTGACGGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR TCA 90 bp CTTAGTAGGCGAGTGTCCGGGGAGAAACCGTCAGCTGTACTTAGTGGCAATCCCCTCTCCTCCCCTAGTTaGTACCTGCTCAACTTCTCC +
Preference number: 2 (lower is better)
Translates to: LSRRVSGEKPSAVLSGNPLSSPS*YLLNFS
Trigger: GGAGAAGTTGAGCAGGTATCAACTAGGGGAGGAGAG...GGGATTGCCACTAAGTACAGCTGACGGTTTCTCCCCGGACACTCGCCTACTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR CCA 90 bp ATTTATTCCAGGGCTGTGGGGGCTGGGGTGATCCTTAAGGGCACTTCTCGTTTCGCTGGGGCTCCTCGGTaGGCATCAGAAAATGAACCA +
Preference number: 2 (lower is better)
Translates to: IYSRAVGAGVILKGTSRFAGAPR*ASENEP
Trigger: TGGTTCATTTTCTGATGCCCACCGAGGAGCCCCAGC...GAAACGAGAAGTGCCCTTAAGGATCACCCCAGCCCCCACAGCCCTGGAATAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR TCA 90 bp ATAAATACCAGCCTGGGAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTAGGGAGAGGGAATCAGTaGTGCCTGGAGCAAAGTTTT +
Preference number: 2 (lower is better)
Translates to: INTSLGGPPLGGARMSIVGRGNQ*CLEQSF
Trigger: AAAACTTTGCTCCAGGCATCACTGATTCCCTCTCCC...TACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTCCCAGGCTGGTATTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR CCA 90 bp ATTTATTCCAGGGCTGTGGGGGCTGGGGTGATCCTTAAGGGCACTTCTCGTTTCTCTCTGGATTGGGGCTaGGGCTCAGAAGTAATGACC +
Preference number: 2 (lower is better)
Translates to: IYSRAVGAGVILKGTSRFSLDWG*GSEVMT
Trigger: GGTCATTACTTCTGAGCCCCAGCCCCAATCCAGAGA...GAAACGAGAAGTGCCCTTAAGGATCACCCCAGCCCCCACAGCCCTGGAATAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR CCA 90 bp ATTTATTCCAGGGCTGTGGGGGCTGGGGTGATCCTTAAGGGCACTTCTCGTTTCAACGTTCTCCTTGGGTaGGAGAGGGAATCAGTGATG +
Preference number: 2 (lower is better)
Translates to: IYSRAVGAGVILKGTSRFNVLLG*ERESVM
Trigger: CATCACTGATTCCCTCTCCCACCCAAGGAGAACGTT...GAAACGAGAAGTGCCCTTAAGGATCACCCCAGCCCCCACAGCCCTGGAATAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR CCA 90 bp AGAAACCGTCAGCTGTACTTAGTGGCAATCCCCAAGCCCCAGCTTCAGTCCTCAAACGTTCTCCTTGGGTaGGAGAGGGAATCAGTGATG +
Preference number: 2 (lower is better)
Translates to: RNRQLYLVAIPKPQLQSSNVLLG*ERESVM
Trigger: CATCACTGATTCCCTCTCCCACCCAAGGAGAACGTT...TGAGGACTGAAGCTGGGGCTTGGGGATTGCCACTAAGTACAGCTGACGGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR CAA 90 bp CGGGACGGACAGCAGGCACCCCGCCGGGGACAGGAGACAGCCGAGGCCTCTCCCAAGGGACCCAACGGGTaGGAGCCACAGAGAGGGGAT +
Preference number: 3 (lower is better)
Translates to: RDGQQAPRRGQETAEASPKGPNG*EPQRGD
Trigger: ATCCCCTCTCTGTGGCTCCAACCCGTTGGGTCCCTT...GGGAGAGGCCTCGGCTGTCTCCTGTCCCCGGCGGGGTGCCTGCTGTCCGTCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR GCA 72 bp AGCCACCTCCTTGGGGCACTCCAAGCAGCAGGCAAGTaGCAGTGGCCACTCCACCTCCGCCAGGCCCTGCCC +
Preference number: 3 (lower is better)
Translates to: SHLLGALQAAGK*QWPLHLRQALP
Trigger: GGGCAGGGCCTGGCGGAGGTGGAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCCCAAGGAGGTGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR CCA 72 bp GCCCCCAACAGGGCATCCTGCTGTTCACCTAGTGGGTaGAGGGCGGGCAACAGCGCTTCTCTGGATTGGGGC +
Preference number: 3 (lower is better)
Translates to: APNRASCCSPSG*RAGNSASLDWG
Trigger: GCCCCAATCCAGAGAAGCGCTGTTGCCCGCCCTCCACCCACTAGGTGAACAGCAGGATGCCCTGTTGGGGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR CCA 72 bp CCCCGCCGGGGACAGGAGACAGCCGAGGCCTCTCCCTaGTGCTTCACCCTGCAGAGTGTCCTTCATGACCTA +
Preference number: 3 (lower is better)
Translates to: PRRGQETAEASP*CFTLQSVLHDL
Trigger: TAGGTCATGAAGGACACTCTGCAGGGTGAAGCACCAGGGAGAGGCCTCGGCTGTCTCCTGTCCCCGGCGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR GCA 72 bp CACCCACAGAGACCTGAAGCCCCCAACAGGGCATCCTaGTGTTCACCTAGTGGGTGGAGGGCGGGCAACAGC +
Preference number: 3 (lower is better)
Translates to: HPQRPEAPNRAS*CSPSGWRAGNS
Trigger: GCTGTTGCCCGCCCTCCACCCACTAGGTGAACAGCAGGATGCCCTGTTGGGGGCTTCAGGTCTCTGTGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR GCA 72 bp CGCCGGGGACAGGAGACAGCCGAGGCCTCTCCCTGGTaGTTCACCCTGCAGAGTGTCCTTCATGACCTAGGA +
Preference number: 3 (lower is better)
Translates to: RRGQETAEASPW*FTLQSVLHDLG
Trigger: TCCTAGGTCATGAAGGACACTCTGCAGGGTGAAGCACCAGGGAGAGGCCTCGGCTGTCTCCTGTCCCCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR TCA 72 bp CTCTCCCTGGTGCTTCACCCTGCAGAGTGTCCTTCATaGCCTAGGACAGGGGGTCAGGGAGCTGAGGGCCAG +
Preference number: 3 (lower is better)
Translates to: LSLVLHPAECPS*PRTGGQGAEGQ
Trigger: CTGGCCCTCAGCTCCCTGACCCCCTGTCCTAGGTCATGAAGGACACTCTGCAGGGTGAAGCACCAGGGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR CCA 72 bp TGGAGGGCGGGCAACAGCGCTTCTCTGGATTGGGGCTaGGGCTCAGAAGTAATGACCCAGCACCACCCCAAG +
Preference number: 3 (lower is better)
Translates to: WRAGNSASLDWG*GSEVMTQHHPK
Trigger: CTTGGGGTGGTGCTGGGTCATTACTTCTGAGCCCCAGCCCCAATCCAGAGAAGCGCTGTTGCCCGCCCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR TCA 72 bp CTGTCTGTTTCCAGGAGAGGAGGAAGGGATGACCTCTaGTCCAAGGGACGTCGAGGCCCACCAGGGAATCCC +
Preference number: 3 (lower is better)
Translates to: LSVSRRGGRDDL*SKGRRGPPGNP
Trigger: GGGATTCCCTGGTGGGCCTCGACGTCCCTTGGATCAGAGGTCATCCCTTCCTCCTCTCCTGGAAACAGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR GCA 72 bp CCCAGTCTCCTCCAACTGGGCAGGCTCAGCACAAGCTaGAACAGTAACATGAAAGCGGGACGGACAGCAGGC +
Preference number: 3 (lower is better)
Translates to: PSLLQLGRLSTS*NSNMKAGRTAG
Trigger: GCCTGCTGTCCGTCCCGCTTTCATGTTACTGTTGCAGCTTGTGCTGAGCCTGCCCAGTTGGAGGAGACTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR CCA 72 bp CAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTaGAGCCACAGAGAGGGGATCAACAGCGCTATCCCT +
Preference number: 3 (lower is better)
Translates to: QLHGFAARDPTG*SHREGINSAIP
Trigger: AGGGATAGCGCTGTTGATCCCCTCTCTGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR CAA 90 bp CTTAGTAGGCGAGTGTCCGGGGAGAAACCGTCAGCTGTACTTAGTGGCAATCCCTTAACAGCCACCTCCTaGGGGCACTCCAAGCAGCAG +
Preference number: 3 (lower is better)
Translates to: LSRRVSGEKPSAVLSGNPLTATS*GHSKQQ
Trigger: CTGCTGCTTGGAGTGCCCCAAGGAGGTGGCTGTTAA...GGGATTGCCACTAAGTACAGCTGACGGTTTCTCCCCGGACACTCGCCTACTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR CAA 90 bp ATAAATACCAGCCTGGGAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTATTAACAGCCACCTCCTaGGGGCACTCCAAGCAGCAG +
Preference number: 3 (lower is better)
Translates to: INTSLGGPPLGGARMSIVLTATS*GHSKQQ
Trigger: CTGCTGCTTGGAGTGCCCCAAGGAGGTGGCTGTTAA...TACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTCCCAGGCTGGTATTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR CAA 90 bp GAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTACCAAACGTTCTCCTTGTATCAATGCCCCCTCTaGCAGAGGTCAGGTGGGGTA +
Preference number: 3 (lower is better)
Translates to: EGHLWVGLGCRLYQTFSLYQCPL*QRSGGV
Trigger: TACCCCACCTGACCTCTGCAAGAGGGGGCATTGATA...CAAGGAGAACGTTTGGTACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR CAA 90 bp TGGTGCTTCACCCTGCAGAGTGTCCTTCATGACCTAGGACAGGGGGTCAGGGAGGGGCTAGGATGTCGATaGTACCAAACGTTCTCCTTG +
Preference number: 3 (lower is better)
Translates to: WCFTLQSVLHDLGQGVREGLGCR*YQTFSL
Trigger: CAAGGAGAACGTTTGGTACAATCGACATCCTAGCCC...CTCCCTGACCCCCTGTCCTAGGTCATGAAGGACACTCTGCAGGGTGAAGCACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR TCA 72 bp ATTGCGAAATTTATTCCAGGGCTGTGGGGGCTGGGGTaGTCCTTAAGGGCACTTCTCGTTTCAGGGCTGTGG +
Preference number: 3 (lower is better)
Translates to: IAKFIPGLWGLG*SLRALLVSGLW
Trigger: CCACAGCCCTGAAACGAGAAGTGCCCTTAAGGATCACCCCAGCCCCCACAGCCCTGGAATAAATTTCGCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR-3UTR CAA 90 bp AGAAACCGTCAGCTGTACTTAGTGGCAATCCCCAAGCCCCAGCTTCAGTCCTCATACCAAACGTTCTCCTaGGGTGGGAGAGGGAATCAG +
Preference number: 3 (lower is better)
Translates to: RNRQLYLVAIPKPQLQSSYQTFS*GGRGNQ
Trigger: CTGATTCCCTCTCCCACCCAAGGAGAACGTTTGGTA...TGAGGACTGAAGCTGGGGCTTGGGGATTGCCACTAAGTACAGCTGACGGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR CCA 72 bp GCTAGGATGTCGATTGTACCAAACGTTCTCCTTGGGTaGGAGAGGGAATCAGTGATGCCTGGAGCAAAGTTT +
Preference number: 3 (lower is better)
Translates to: ARMSIVPNVLLG*ERESVMPGAKF
Trigger: AAACTTTGCTCCAGGCATCACTGATTCCCTCTCCCACCCAAGGAGAACGTTTGGTACAATCGACATCCTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp CGGGACGGACAGCAGGCACCCCGCCGGGGACAGGAGACAGCCGAGGCCTCTCCCAGCAGCGAGCCCGCCTaGGTGGCCACTGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: RDGQQAPRRGQETAEASPSSEPA*VATVVS
Trigger: GCTGACCACAGTGGCCACCCAGGCGGGCTCGCTGCT...GGGAGAGGCCTCGGCTGTCTCCTGTCCCCGGCGGGGTGCCTGCTGTCCGTCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp CGGGACGGACAGCAGGCACCCCGCCGGGGACAGGAGACAGCCGAGGCCTCTCCCGGTGGCGACTGTGGGTaGGCAGAAACCCCCTCACAC +
Preference number: 4 (lower is better)
Translates to: RDGQQAPRRGQETAEASPGGDCG*AETPSH
Trigger: GTGTGAGGGGGTTTCTGCGCACCCACAGTCGCCACC...GGGAGAGGCCTCGGCTGTCTCCTGTCCCCGGCGGGGTGCCTGCTGTCCGTCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp CCAAGGGACGTCGAGGCCCACCAGGGAATCCCGAACCTCCTCCCCGGACCTGCACGGCGGCCAGGCCCTTaGGCTCAGGCCCATGCAGGC +
Preference number: 4 (lower is better)
Translates to: PRDVEAHQGIPNLLPGPARRPGP*AQAHAG
Trigger: GCCTGCATGGGCCTGAGCCCAAGGGCCTGGCCGCCG...TGCAGGTCCGGGGAGGAGGTTCGGGATTCCCTGGTGGGCCTCGACGTCCCTTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp CGGGACGGACAGCAGGCACCCCGCCGGGGACAGGAGACAGCCGAGGCCTCTCCCCTGTGGGGGCTGGGGTaGTCCTTAAGGGCACTTCTC +
Preference number: 4 (lower is better)
Translates to: RDGQQAPRRGQETAEASPLWGLG*SLRALL
Trigger: GAGAAGTGCCCTTAAGGATCACCCCAGCCCCCACAG...GGGAGAGGCCTCGGCTGTCTCCTGTCCCCGGCGGGGTGCCTGCTGTCCGTCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp CGGGACGGACAGCAGGCACCCCGCCGGGGACAGGAGACAGCCGAGGCCTCTCCCTCCAGCTGCAGCAGCTaGAGGATGAGCTCAGGCACG +
Preference number: 4 (lower is better)
Translates to: RDGQQAPRRGQETAEASPSSCSS*RMSSGT
Trigger: CGTGCCTGAGCTCATCCTGCAGCTGCTGCAGCTGGA...GGGAGAGGCCTCGGCTGTCTCCTGTCCCCGGCGGGGTGCCTGCTGTCCGTCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp CGGGACGGACAGCAGGCACCCCGCCGGGGACAGGAGACAGCCGAGGCCTCTCCCTCATCCGGCTCCAGCTaGAGCAGCTGCAGGATGAGC +
Preference number: 4 (lower is better)
Translates to: RDGQQAPRRGQETAEASPSSGSS*SSCRMS
Trigger: GCTCATCCTGCAGCTGCTGCAGCTGGAGCCGGATGA...GGGAGAGGCCTCGGCTGTCTCCTGTCCCCGGCGGGGTGCCTGCTGTCCGTCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp CGGGACGGACAGCAGGCACCCCGCCGGGGACAGGAGACAGCCGAGGCCTCTCCCGAGGCCTCTCCCTGGTaGTTCACCCTGCAGAGTGTC +
Preference number: 4 (lower is better)
Translates to: RDGQQAPRRGQETAEASPEASPW*FTLQSV
Trigger: GACACTCTGCAGGGTGAAGCACCAGGGAGAGGCCTC...GGGAGAGGCCTCGGCTGTCTCCTGTCCCCGGCGGGGTGCCTGCTGTCCGTCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp GGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCCACCTCCGCCAGGCCCCGGGGCGGCTTTTGGTaGGCTCCTGCAGGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GHSKQQASASGHSTSARPRGGFW*APAGSP
Trigger: TGGGCTGCCTGCAGGAGCCCACCAAAAGCCGCCCCG...GGGCCTGGCGGAGGTGGAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp GGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCCACCTCCGCCAGGCCCTGCAGCGCAAGCAGCTaGAGCACCAGCTCCTGCGCC +
Preference number: 4 (lower is better)
Translates to: GHSKQQASASGHSTSARPCSASS*STSSCA
Trigger: GGCGCAGGAGCTGGTGCTGCAGCTGCTTGCGCTGCA...GGGCCTGGCGGAGGTGGAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp GCCACCTCCTTGGGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCCACCCCTCTGGGACGGGGCTaGGGCTCCTCGGTGGGCATC +
Preference number: 4 (lower is better)
Translates to: ATSLGHSKQQASASGHSTPLGRG*GSSVGI
Trigger: GATGCCCACCGAGGAGCCCCAGCCCCGTCCCAGAGG...GGTGGAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCCCAAGGAGGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp AACAGCCACCTCCTTGGGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCCGGCGGCCAGGCCCTTaGGCTCAGGCCCATGCAGGC +
Preference number: 4 (lower is better)
Translates to: NSHLLGALQAAGKCQWPLRRPGP*AQAHAG
Trigger: GCCTGCATGGGCCTGAGCCCAAGGGCCTGGCCGCCG...GAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCCCAAGGAGGTGGCTGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp CCAAGGGACGTCGAGGCCCACCAGGGAATCCCGAACCTCCTCCCCGGACCTGCACGTACGAATAGTCCATaGCCGCGGCGTCCGCGAAGC +
Preference number: 4 (lower is better)
Translates to: PRDVEAHQGIPNLLPGPARTNSP*PRRPRS
Trigger: GCTTCGCGGACGCCGCGGGCATGGACTATTCGTACG...TGCAGGTCCGGGGAGGAGGTTCGGGATTCCCTGGTGGGCCTCGACGTCCCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp CCAGGGAATCCCGAACCTCCTCCCCGGACCTGCAGGCTTCAGACTCCAGGAGAGCGCTCTCACACCGGATaGGGGTGGCAGTGGGCACCA +
Preference number: 4 (lower is better)
Translates to: PGNPEPPPRTCRLQTPGERSHTG*GWQWAP
Trigger: TGGTGCCCACTGCCACCCTCATCCGGTGTGAGAGCG...CTCTCCTGGAGTCTGAAGCCTGCAGGTCCGGGGAGGAGGTTCGGGATTCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp GAGAGGGGATCAACAGCGCTATCCCTGATCTACAGGCCCGTGCCCCCTCCCAAGGCAGGCAGCCCAAGATaGGGGCCCGCACCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: ERGSTALSLIYRPVPPPKAGSPR*GPAPGP
Trigger: AGGACCAGGTGCGGGCCCGCATCTTGGGCTGCCTGC...CTTGGGAGGGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTGATCCCCTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp AACAGCCACCTCCTTGGGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCCACGGCCATGGGCAGTaGTGGGGCCCCAAAGTCGCC +
Preference number: 4 (lower is better)
Translates to: NSHLLGALQAAGKCQWPLHGHGQ*WGPKVA
Trigger: GGCGACTTTGGGGCCCCAGCACTGCCCATGGCCGTG...GAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCCCAAGGAGGTGGCTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp CGGGACGGACAGCAGGCACCCCGCCGGGGACAGGAGACAGCCGAGGCCTCTCCCCCCCTAGTTGATACCTaGTCAACTTCTCCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: RDGQQAPRRGQETAEASPPLVDT*STSPCL
Trigger: CAGACAGGGAGAAGTTGAGCAGGTATCAACTAGGGG...GGGAGAGGCCTCGGCTGTCTCCTGTCCCCGGCGGGGTGCCTGCTGTCCGTCCCG
66% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp CCAGGGAATCCCGAACCTCCTCCCCGGACCTGCAGGCTTCAGACTCCAGGAGAGGGCAGGAGGCAGGGGTaGCCAGTCTCCTCCAACTGG +
Preference number: 4 (lower is better)
Translates to: PGNPEPPPRTCRLQTPGEGRRQG*PVSSNW
Trigger: CCAGTTGGAGGAGACTGGGCACCCCTGCCTCCTGCC...CTCTCCTGGAGTCTGAAGCCTGCAGGTCCGGGGAGGAGGTTCGGGATTCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp GCCACAGAGAGGGGATCAACAGCGCTATCCCTGATCTACAGGCCCGTGCCCCCTGGTCGGGGCGGCTTTTaGTGGGCTCCTGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: ATERGSTALSLIYRPVPPGRGGF*WAPAGS
Trigger: GCTGCCTGCAGGAGCCCACCAAAAGCCGCCCCGACC...AGGGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTGATCCCCTCTCTGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp GCCACCTCCTTGGGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCCACCTGCAGCAGCGTCATCTaGTCGGCCACCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ATSLGHSKQQASASGHSTCSSVI*SATSSS
Trigger: GGAGCTGGAGGTGGCCGACCAGATGACGCTGCTGCA...GGTGGAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCCCAAGGAGGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373588.9
CDS-3UTR CCA 90 bp GACCTAGGACAGGGGGTCAGGGAGCTGAGGGCCAGCTTCATGGGTTTGCAGCAACTCCGGCAGCCCAGGTaGGACGGTGGCGACTGTGGG +
Preference number: 4 (lower is better)
Translates to: DLGQGVRELRASFMGLQQLRQPR*DGGDCG
Trigger: CCCACAGTCGCCACCGTCCCACCTGGGCTGCCGGAG...TTGCTGCAAACCCATGAAGCTGGCCCTCAGCTCCCTGACCCCCTGTCCTAGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp CCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACAGAGAGGGCTCCGGCAGCCCAGGTaGGACGGTGGCGACTGTGGG +
Preference number: 4 (lower is better)
Translates to: PASWVCSKGPNGLEPQRGLRQPR*DGGDCG
Trigger: CCCACAGTCGCCACCGTCCCACCTGGGCTGCCGGAG...CCCTCTCTGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp CCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACAGAGAGGGCAGTGGCCCAGCAGGTaGACCGGCGGCCAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: PASWVCSKGPNGLEPQRGQWPSR*TGGQAL
Trigger: AAGGGCCTGGCCGCCGGTCCACCTGCTGGGCCACTG...CCCTCTCTGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp GGGATGACCTCTGATCCAAGGGACGTCGAGGCCCACCAGGGAATCCCGAACCTCCCCAAAGTCGCCCAGTaGCCCAGCAGGTGGACCGGC +
Preference number: 4 (lower is better)
Translates to: GMTSDPRDVEAHQGIPNLPKVAQ*PSRWTG
Trigger: GCCGGTCCACCTGCTGGGCCACTGGGCGACTTTGGG...GAGGTTCGGGATTCCCTGGTGGGCCTCGACGTCCCTTGGATCAGAGGTCATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp GCCACAGAGAGGGGATCAACAGCGCTATCCCTGATCTACAGGCCCGTGCCCCCTCGGCAGCCCAGGCTGTaGGGGGCTGGCATAAGGCTC +
Preference number: 4 (lower is better)
Translates to: ATERGSTALSLIYRPVPPRQPRL*GAGIRL
Trigger: GAGCCTTATGCCAGCCCCCCACAGCCTGGGCTGCCG...AGGGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTGATCCCCTCTCTGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp GCCACCTCCTTGGGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCCACCCCACCTCCAGCTCCTTaGAGACCATGCACCTGCGTG +
Preference number: 4 (lower is better)
Translates to: ATSLGHSKQQASASGHSTPPPAP*RPCTCV
Trigger: CACGCAGGTGCATGGTCTTCAAGGAGCTGGAGGTGG...GGTGGAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCCCAAGGAGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp GCCACCTCCTTGGGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCCACCGGAAGGGATGACCTCTaGTCCAAGGGACGTCGAGGC +
Preference number: 4 (lower is better)
Translates to: ATSLGHSKQQASASGHSTGRDDL*SKGRRG
Trigger: GCCTCGACGTCCCTTGGATCAGAGGTCATCCCTTCC...GGTGGAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCCCAAGGAGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp GCCACCTCCTTGGGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCCACCAGGCAGACAAACTCCTaGCGGTCCAGCTGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: ATSLGHSKQQASASGHSTRQTNS*RSSCSA
Trigger: TGCGCTGCAGCTGGACCGGCAGGAGTTTGTCTGCCT...GGTGGAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCCCAAGGAGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp CCAGGGAATCCCGAACCTCCTCCCCGGACCTGCAGGCTTCAGACTCCAGGAGAGACTCCTTGGCCTGCATaGTCAGGGCCCGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: PGNPEPPPRTCRLQTPGETPWPA*SGPAPP
Trigger: TGGAGGTGCGGGCCCTGAGCATGCAGGCCAAGGAGT...CTCTCCTGGAGTCTGAAGCCTGCAGGTCCGGGGAGGAGGTTCGGGATTCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp GGGCCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACAGAGACACGGCCATGGGCAGTaGTGGGGCCCCAAAGTCGCC +
Preference number: 4 (lower is better)
Translates to: GPASWVCSKGPNGLEPQRHGHGQ*WGPKVA
Trigger: GGCGACTTTGGGGCCCCAGCACTGCCCATGGCCGTG...TCTCTGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp GGGCCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACAGAGAATGCGGGCCCGCACCTaGTCCTCATCCGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GPASWVCSKGPNGLEPQRMRART*SSSGSS
Trigger: GCTGGAGCCGGATGAGGACCAGGTGCGGGCCCGCAT...TCTCTGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp TGGTGCTTCACCCTGCAGAGTGTCCTTCATGACCTAGGACAGGGGGTCAGGGAGCCGAAGGCCGCCGGCTaGTCGGGGCGGCTTTTGGTG +
Preference number: 4 (lower is better)
Translates to: WCFTLQSVLHDLGQGVREPKAAG*SGRLLV
Trigger: CACCAAAAGCCGCCCCGACCAGCCGGCGGCCTTCGG...CTCCCTGACCCCCTGTCCTAGGTCATGAAGGACACTCTGCAGGGTGAAGCACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp GCCACAGAGAGGGGATCAACAGCGCTATCCCTGATCTACAGGCCCGTGCCCCCTCCTGGGTGGCCACTGTaGTCAGCTCCACCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: ATERGSTALSLIYRPVPPPGWPL*SAPPPA
Trigger: GGCAGGAGGTGGAGCTGACCACAGTGGCCACCCAGG...AGGGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTGATCCCCTCTCTGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373588.9
CDS-3UTR CCA 90 bp GCCACCTCCTTGGGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCCACCCAAGCAGGGCGGCGTTaGCCTTCTCCTGAGCGTCTT +
Preference number: 4 (lower is better)
Translates to: ATSLGHSKQQASASGHSTQAGRR*PSPERL
Trigger: AAGACGCTCAGGAGAAGGCCAACGCCGCCCTGCTTG...GGTGGAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCCCAAGGAGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp CCAAGGGACGTCGAGGCCCACCAGGGAATCCCGAACCTCCTCCCCGGACCTGCACACAGCAGCAGCTGCTaGAATTTGTCCCCGCAGTGC +
Preference number: 4 (lower is better)
Translates to: PRDVEAHQGIPNLLPGPAHSSSC*NLSPQC
Trigger: GCACTGCGGGGACAAATTCCAGCAGCTGCTGCTGTG...TGCAGGTCCGGGGAGGAGGTTCGGGATTCCCTGGTGGGCCTCGACGTCCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp GACCTAGGACAGGGGGTCAGGGAGCTGAGGGCCAGCTTCATGGGTTTGCAGCAAGCCCAGGTGGGACGGTaGCGACTGTGGGTGCGCAGA +
Preference number: 4 (lower is better)
Translates to: DLGQGVRELRASFMGLQQAQVGR*RLWVRR
Trigger: TCTGCGCACCCACAGTCGCCACCGTCCCACCTGGGC...TTGCTGCAAACCCATGAAGCTGGCCCTCAGCTCCCTGACCCCCTGTCCTAGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp GGCGAGTGTCCGGGGAGAAACCGTCAGCTGTACTTAGTGGCAATCCCCAAGCCCCCCAAAGTCGCCCAGTaGCCCAGCAGGTGGACCGGC +
Preference number: 4 (lower is better)
Translates to: GECPGRNRQLYLVAIPKPPKVAQ*PSRWTG
Trigger: GCCGGTCCACCTGCTGGGCCACTGGGCGACTTTGGG...GGGCTTGGGGATTGCCACTAAGTACAGCTGACGGTTTCTCCCCGGACACTCGCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp CTGAGGGCCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACAGGCCATGGGCAGTGCTaGGGCCCCAAAGTCGCCCAG +
Preference number: 4 (lower is better)
Translates to: LRASFMGLQQGTQRVGATGHGQC*GPKVAQ
Trigger: CTGGGCGACTTTGGGGCCCCAGCACTGCCCATGGCC...TGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGGCCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp TGGTGCTTCACCCTGCAGAGTGTCCTTCATGACCTAGGACAGGGGGTCAGGGAGCACCGGGCACGGCCATaGGCAGTGCTGGGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: WCFTLQSVLHDLGQGVREHRARP*AVLGPQ
Trigger: TTGGGGCCCCAGCACTGCCCATGGCCGTGCCCGGTG...CTCCCTGACCCCCTGTCCTAGGTCATGAAGGACACTCTGCAGGGTGAAGCACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp GGGCCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACAGAGACGGCAGCCCAGGCTGTaGGGGGCTGGCATAAGGCTC +
Preference number: 4 (lower is better)
Translates to: GPASWVCSKGPNGLEPQRRQPRL*GAGIRL
Trigger: GAGCCTTATGCCAGCCCCCCACAGCCTGGGCTGCCG...TCTCTGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp AATACCAGCCTGGGAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTACCACCTCTGGGACGGGGCTaGGGCTCCTCGGTGGGCATC +
Preference number: 4 (lower is better)
Translates to: NTSLGGPPLGGARMSIVPPLGRG*GSSVGI
Trigger: GATGCCCACCGAGGAGCCCCAGCCCCGTCCCAGAGG...TGGTACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTCCCAGGCTGGTATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp GCCACCTCCTTGGGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCCACCAGGGACCCAACGGGTTaGAGCCACAGAGAGGGGATC +
Preference number: 4 (lower is better)
Translates to: ATSLGHSKQQASASGHSTRDPTG*SHREGI
Trigger: GATCCCCTCTCTGTGGCTCCAACCCGTTGGGTCCCT...GGTGGAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCCCAAGGAGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
3UTR CAA 72 bp CAGGGGGTCAGGGAGCTGAGGGCCAGCTTCATGGGTTaGCAGCAAGGGACCCAACGGGTTGGAGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: QGVRELRASFMG*QQGTQRVGATE
Trigger: CTCTGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGGCCCTCAGCTCCCTGACCCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp GCCACCTCCTTGGGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCCACCTGCAGCTCTCACACGTaGGCAGTCCGTAGTGGTAGC +
Preference number: 4 (lower is better)
Translates to: ATSLGHSKQQASASGHSTCSSHT*AVRSGS
Trigger: GCTACCACTACGGACTGCTCACGTGTGAGAGCTGCA...GGTGGAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCCCAAGGAGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp GCCACCTCCTTGGGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCCACCGCCCTGTCTCCAGCTTaGAGCCATTGGCCCGAATCT +
Preference number: 4 (lower is better)
Translates to: ATSLGHSKQQASASGHSTALSPA*SHWPES
Trigger: AGATTCGGGCCAATGGCTTCAAGCTGGAGACAGGGC...GGTGGAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCCCAAGGAGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp GAGAGGGGATCAACAGCGCTATCCCTGATCTACAGGCCCGTGCCCCCTCCCAAGCAACAGCGCTATCCCTaGTCTACAGGCCCGTGCCCC +
Preference number: 4 (lower is better)
Translates to: ERGSTALSLIYRPVPPPKQQRYP*STGPCP
Trigger: GGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTG...CTTGGGAGGGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTGATCCCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp GCCACAGAGAGGGGATCAACAGCGCTATCCCTGATCTACAGGCCCGTGCCCCCTAGGGGGTCAGGGAGCTaGGGGCCAGCTTCATGGGTT +
Preference number: 4 (lower is better)
Translates to: ATERGSTALSLIYRPVPPRGSGS*GPASWV
Trigger: AACCCATGAAGCTGGCCCTCAGCTCCCTGACCCCCT...AGGGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTGATCCCCTCTCTGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp GCCACCTCCTTGGGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCCACCGCAGAGTGTCCTTCATaGCCTAGGACAGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: ATSLGHSKQQASASGHSTAECPS*PRTGGQ
Trigger: CTGACCCCCTGTCCTAGGTCATGAAGGACACTCTGC...GGTGGAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCCCAAGGAGGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp CCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACAGAGAGGGTGCAGCACCAGCTCCTaGGCCCGCAACACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PASWVCSKGPNGLEPQRGCSTSS*ARNTRL
Trigger: CAGCCTGGTGTTGCGGGCGCAGGAGCTGGTGCTGCA...CCCTCTCTGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp GACCTAGGACAGGGGGTCAGGGAGCTGAGGGCCAGCTTCATGGGTTTGCAGCAATGCAGCACCAGCTCCTaGGCCCGCAACACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: DLGQGVRELRASFMGLQQCSTSS*ARNTRL
Trigger: CAGCCTGGTGTTGCGGGCGCAGGAGCTGGTGCTGCA...TTGCTGCAAACCCATGAAGCTGGCCCTCAGCTCCCTGACCCCCTGTCCTAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp CTGAGGGCCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACATGCAGCGCAAGCAGCTaGAGCACCAGCTCCTGCGCC +
Preference number: 4 (lower is better)
Translates to: LRASFMGLQQGTQRVGATCSASS*STSSCA
Trigger: GGCGCAGGAGCTGGTGCTGCAGCTGCTTGCGCTGCA...TGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGGCCCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp GCCACAGAGAGGGGATCAACAGCGCTATCCCTGATCTACAGGCCCGTGCCCCCTACTCCTTGGCCTGCATaGTCAGGGCCCGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: ATERGSTALSLIYRPVPPTPWPA*SGPAPP
Trigger: TGGAGGTGCGGGCCCTGAGCATGCAGGCCAAGGAGT...AGGGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTGATCCCCTCTCTGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp GCCACCTCCTTGGGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCCACCTGCGGGGCATCTCGTTaGCCAGGTGCTTGTGGTACA +
Preference number: 4 (lower is better)
Translates to: ATSLGHSKQQASASGHSTCGASR*PGACGT
Trigger: TGTACCACAAGCACCTGGGCAACGAGATGCCCCGCA...GGTGGAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCCCAAGGAGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp CCAAGGGACGTCGAGGCCCACCAGGGAATCCCGAACCTCCTCCCCGGACCTGCAGCCCAGGCTCAAGTCTaGTTGGCTTGCAGCATTTCG +
Preference number: 4 (lower is better)
Translates to: PRDVEAHQGIPNLLPGPAAQAQV*LACSIS
Trigger: CGAAATGCTGCAAGCCAAGCAGACTTGAGCCTGGGC...TGCAGGTCCGGGGAGGAGGTTCGGGATTCCCTGGTGGGCCTCGACGTCCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp GGGATGACCTCTGATCCAAGGGACGTCGAGGCCCACCAGGGAATCCCGAACCTCCGTACGAATAGTCCATaGCCGCGGCGTCCGCGAAGC +
Preference number: 4 (lower is better)
Translates to: GMTSDPRDVEAHQGIPNLRTNSP*PRRPRS
Trigger: GCTTCGCGGACGCCGCGGGCATGGACTATTCGTACG...GAGGTTCGGGATTCCCTGGTGGGCCTCGACGTCCCTTGGATCAGAGGTCATCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp GGGCCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACAGAGATTGGGCTCAGGCCCATaGAGGCTGGGAGGCAGCACG +
Preference number: 4 (lower is better)
Translates to: GPASWVCSKGPNGLEPQRLGSGP*RLGGST
Trigger: CGTGCTGCCTCCCAGCCTGCATGGGCCTGAGCCCAA...TCTCTGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp GGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCCACCTCCGCCAGGCCCCCTCCCAAGTTCACTTaGATTCCCACCCACAGAGAC +
Preference number: 4 (lower is better)
Translates to: GHSKQQASASGHSTSARPPPKFT*IPTHRD
Trigger: GTCTCTGTGGGTGGGAATGCAAGTGAACTTGGGAGG...GGGCCTGGCGGAGGTGGAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp GGGCCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACAGAGAGGCAGGAGGCAGGGGTaGCCAGTCTCCTCCAACTGG +
Preference number: 4 (lower is better)
Translates to: GPASWVCSKGPNGLEPQRGRRQG*PVSSNW
Trigger: CCAGTTGGAGGAGACTGGGCACCCCTGCCTCCTGCC...TCTCTGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp GACCTAGGACAGGGGGTCAGGGAGCTGAGGGCCAGCTTCATGGGTTTGCAGCAAGGACGGTGGCGACTGTaGGTGCGCAGAAACCCCCTC +
Preference number: 4 (lower is better)
Translates to: DLGQGVRELRASFMGLQQGRWRL*VRRNPL
Trigger: GAGGGGGTTTCTGCGCACCCACAGTCGCCACCGTCC...TTGCTGCAAACCCATGAAGCTGGCCCTCAGCTCCCTGACCCCCTGTCCTAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp AATACCAGCCTGGGAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTACCAGCCCAGGTGGGACGGTaGCGACTGTGGGTGCGCAGA +
Preference number: 4 (lower is better)
Translates to: NTSLGGPPLGGARMSIVPAQVGR*RLWVRR
Trigger: TCTGCGCACCCACAGTCGCCACCGTCCCACCTGGGC...TGGTACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTCCCAGGCTGGTATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp TGGTGCTTCACCCTGCAGAGTGTCCTTCATGACCTAGGACAGGGGGTCAGGGAGGGCCATGGGCAGTGCTaGGGCCCCAAAGTCGCCCAG +
Preference number: 4 (lower is better)
Translates to: WCFTLQSVLHDLGQGVREGHGQC*GPKVAQ
Trigger: CTGGGCGACTTTGGGGCCCCAGCACTGCCCATGGCC...CTCCCTGACCCCCTGTCCTAGGTCATGAAGGACACTCTGCAGGGTGAAGCACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp GAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTACCAAACGTTCTCCTTGCACCGGGCACGGCCATaGGCAGTGCTGGGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: EGHLWVGLGCRLYQTFSLHRARP*AVLGPQ
Trigger: TTGGGGCCCCAGCACTGCCCATGGCCGTGCCCGGTG...CAAGGAGAACGTTTGGTACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp CCAAGGGACGTCGAGGCCCACCAGGGAATCCCGAACCTCCTCCCCGGACCTGCAGCTGGGGCTCCTCGGTaGGCATCAGAAAATGAACCA +
Preference number: 4 (lower is better)
Translates to: PRDVEAHQGIPNLLPGPAAGAPR*ASENEP
Trigger: TGGTTCATTTTCTGATGCCCACCGAGGAGCCCCAGC...TGCAGGTCCGGGGAGGAGGTTCGGGATTCCCTGGTGGGCCTCGACGTCCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp CTGAGGGCCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACAGCAGGCAAGTGCCAGTaGCCACTCCACCTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: LRASFMGLQQGTQRVGATAGKCQ*PLHLRQ
Trigger: CTGGCGGAGGTGGAGTGGCCACTGGCACTTGCCTGC...TGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGGCCCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp CCAGGGAATCCCGAACCTCCTCCCCGGACCTGCAGGCTTCAGACTCCAGGAGAGCCCTCCTGGTCTCTATaGGGGGAACACTGGAGACCC +
Preference number: 4 (lower is better)
Translates to: PGNPEPPPRTCRLQTPGEPSWSL*GEHWRP
Trigger: GGGTCTCCAGTGTTCCCCCCATAGAGACCAGGAGGG...CTCTCCTGGAGTCTGAAGCCTGCAGGTCCGGGGAGGAGGTTCGGGATTCCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp TGGTGCTTCACCCTGCAGAGTGTCCTTCATGACCTAGGACAGGGGGTCAGGGAGGGTACTGAGACAGGGTaGCGGGAGGCGGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: WCFTLQSVLHDLGQGVREGTETG*REAGGR
Trigger: CCTGCCTCCCGCCTCCCGCCACCCTGTCTCAGTACC...CTCCCTGACCCCCTGTCCTAGGTCATGAAGGACACTCTGCAGGGTGAAGCACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp AATACCAGCCTGGGAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTACCAGGTACTGAGACAGGGTaGCGGGAGGCGGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: NTSLGGPPLGGARMSIVPGTETG*REAGGR
Trigger: CCTGCCTCCCGCCTCCCGCCACCCTGTCTCAGTACC...TGGTACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTCCCAGGCTGGTATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp GAGAGGGGATCAACAGCGCTATCCCTGATCTACAGGCCCGTGCCCCCTCCCAAGCTCGTTTCAGGGCTGTaGGTCTCCGGCCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: ERGSTALSLIYRPVPPPKLVSGL*VSGLGR
Trigger: CCTGCCAAGGCCGGAGACCCACAGCCCTGAAACGAG...CTTGGGAGGGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTGATCCCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp GCCACAGAGAGGGGATCAACAGCGCTATCCCTGATCTACAGGCCCGTGCCCCCTCCACCTCCAGCTCCTTaGAGACCATGCACCTGCGTG +
Preference number: 4 (lower is better)
Translates to: ATERGSTALSLIYRPVPPPPPAP*RPCTCV
Trigger: CACGCAGGTGCATGGTCTTCAAGGAGCTGGAGGTGG...AGGGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTGATCCCCTCTCTGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp GGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCCACCTCCGCCAGGCCCGGGAGAGGGAATCAGTaGTGCCTGGAGCAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: GHSKQQASASGHSTSARPGRGNQ*CLEQSF
Trigger: AAAACTTTGCTCCAGGCATCACTGATTCCCTCTCCC...GGGCCTGGCGGAGGTGGAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp GGGCCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACAGAGAAGGGGGTCAGGGAGCTaGGGGCCAGCTTCATGGGTT +
Preference number: 4 (lower is better)
Translates to: GPASWVCSKGPNGLEPQRRGSGS*GPASWV
Trigger: AACCCATGAAGCTGGCCCTCAGCTCCCTGACCCCCT...TCTCTGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp GCCACCTCCTTGGGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCCACCGCTGCAACAGTAACATaGAAGCGGGACGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: ATSLGHSKQQASASGHSTAATVT*KRDGQQ
Trigger: CTGCTGTCCGTCCCGCTTTCATGTTACTGTTGCAGC...GGTGGAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCCCAAGGAGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp CTGAGGGCCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACATCTGGTCGGCCATTCTaGACAGGAGGCCGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: LRASFMGLQQGTQRVGATSGRPF*TGGRRP
Trigger: CGGCCTTCGGCCTCCTGTGCAGAATGGCCGACCAGA...TGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGGCCCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp CCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACAGAGAGGGGTCAGCTCCACCTCCTaGCCGGTGACCAGCAGGATG +
Preference number: 4 (lower is better)
Translates to: PASWVCSKGPNGLEPQRGVSSTS*PVTSRM
Trigger: CATCCTGCTGGTCACCGGGCAGGAGGTGGAGCTGAC...CCCTCTCTGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373588.9
CDS-3UTR GCA 90 bp GGGCCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACAGAGAAGGTACTCCTTGGCCTaGATGCTCAGGGCCCGCACC +
Preference number: 4 (lower is better)
Translates to: GPASWVCSKGPNGLEPQRRYSLA*MLRART
Trigger: GGTGCGGGCCCTGAGCATGCAGGCCAAGGAGTACCT...TCTCTGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp GCCACCTCCTTGGGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCCACCATCTGTGCCTTCTTCTaGTGTTTCAGGGCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: ATSLGHSKQQASASGHSTICAFF*CFRARS
Trigger: GGACCGGGCCCTGAAACAGCAGAAGAAGGCACAGAT...GGTGGAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCCCAAGGAGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp GGCGAGTGTCCGGGGAGAAACCGTCAGCTGTACTTAGTGGCAATCCCCAAGCCCCCTCCTCCCCGGACCTaGAGGCTTCAGACTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GECPGRNRQLYLVAIPKPPPPRT*RLQTPG
Trigger: TCCTGGAGTCTGAAGCCTGCAGGTCCGGGGAGGAGG...GGGCTTGGGGATTGCCACTAAGTACAGCTGACGGTTTCTCCCCGGACACTCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp GGGATGACCTCTGATCCAAGGGACGTCGAGGCCCACCAGGGAATCCCGAACCTCGAGGCCTCTCCCTGGTaGTTCACCCTGCAGAGTGTC +
Preference number: 4 (lower is better)
Translates to: GMTSDPRDVEAHQGIPNLEASPW*FTLQSV
Trigger: GACACTCTGCAGGGTGAAGCACCAGGGAGAGGCCTC...GAGGTTCGGGATTCCCTGGTGGGCCTCGACGTCCCTTGGATCAGAGGTCATCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp ATAAATACCAGCCTGGGAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTACCGAAGGCCGCCGGCTaGTCGGGGCGGCTTTTGGTG +
Preference number: 4 (lower is better)
Translates to: INTSLGGPPLGGARMSIVPKAAG*SGRLLV
Trigger: CACCAAAAGCCGCCCCGACCAGCCGGCGGCCTTCGG...TACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTCCCAGGCTGGTATTTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp CCAAGGGACGTCGAGGCCCACCAGGGAATCCCGAACCTCCTCCCCGGACCTGCAATGGAGATGAAGGTCTaGTCGGCCATTCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: PRDVEAHQGIPNLLPGPAMEMKV*SAILHR
Trigger: CCTGTGCAGAATGGCCGACCAGACCTTCATCTCCAT...TGCAGGTCCGGGGAGGAGGTTCGGGATTCCCTGGTGGGCCTCGACGTCCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp AACAGCCACCTCCTTGGGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCCAAGCAGGGCGGCGTTaGCCTTCTCCTGAGCGTCTT +
Preference number: 4 (lower is better)
Translates to: NSHLLGALQAAGKCQWPLQAGRR*PSPERL
Trigger: AAGACGCTCAGGAGAAGGCCAACGCCGCCCTGCTTG...GAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCCCAAGGAGGTGGCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp TGGTGCTTCACCCTGCAGAGTGTCCTTCATGACCTAGGACAGGGGGTCAGGGAGGGACGGTGGCGACTGTaGGTGCGCAGAAACCCCCTC +
Preference number: 4 (lower is better)
Translates to: WCFTLQSVLHDLGQGVREGRWRL*VRRNPL
Trigger: GAGGGGGTTTCTGCGCACCCACAGTCGCCACCGTCC...CTCCCTGACCCCCTGTCCTAGGTCATGAAGGACACTCTGCAGGGTGAAGCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp ATAAATACCAGCCTGGGAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTACAGTGGCCCAGCAGGTaGACCGGCGGCCAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: INTSLGGPPLGGARMSIVQWPSR*TGGQAL
Trigger: AAGGGCCTGGCCGCCGGTCCACCTGCTGGGCCACTG...TACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTCCCAGGCTGGTATTTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp GCCACCTCCTTGGGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCCACCGCTGGGGCTCCTCGGTaGGCATCAGAAAATGAACCA +
Preference number: 4 (lower is better)
Translates to: ATSLGHSKQQASASGHSTAGAPR*ASENEP
Trigger: TGGTTCATTTTCTGATGCCCACCGAGGAGCCCCAGC...GGTGGAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCCCAAGGAGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp GACCTAGGACAGGGGGTCAGGGAGCTGAGGGCCAGCTTCATGGGTTTGCAGCAATGGGAGGGCCACCTCTaGGTGGGGCTAGGATGTCGA +
Preference number: 4 (lower is better)
Translates to: DLGQGVRELRASFMGLQQWEGHL*VGLGCR
Trigger: TCGACATCCTAGCCCCACCCAGAGGTGGCCCTCCCA...TTGCTGCAAACCCATGAAGCTGGCCCTCAGCTCCCTGACCCCCTGTCCTAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp CCAAGGGACGTCGAGGCCCACCAGGGAATCCCGAACCTCCTCCCCGGACCTGCATCTCTGGATTGGGGCTaGGGCTCAGAAGTAATGACC +
Preference number: 4 (lower is better)
Translates to: PRDVEAHQGIPNLLPGPASLDWG*GSEVMT
Trigger: GGTCATTACTTCTGAGCCCCAGCCCCAATCCAGAGA...TGCAGGTCCGGGGAGGAGGTTCGGGATTCCCTGGTGGGCCTCGACGTCCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp AACAGCCACCTCCTTGGGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCGCAACAGCGCTTCTCTaGATTGGGGCTGGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: NSHLLGALQAAGKCQWPLATALL*IGAGAQ
Trigger: CTGAGCCCCAGCCCCAATCCAGAGAAGCGCTGTTGC...GAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCCCAAGGAGGTGGCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp CTGAGGGCCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACAGCCGAGGCCTCTCCCTaGTGCTTCACCCTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: LRASFMGLQQGTQRVGATAEASP*CFTLQS
Trigger: ACTCTGCAGGGTGAAGCACCAGGGAGAGGCCTCGGC...TGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGGCCCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp GGCGAGTGTCCGGGGAGAAACCGTCAGCTGTACTTAGTGGCAATCCCCAAGCCCGCCGAGGCCTCTCCCTaGTGCTTCACCCTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: GECPGRNRQLYLVAIPKPAEASP*CFTLQS
Trigger: ACTCTGCAGGGTGAAGCACCAGGGAGAGGCCTCGGC...GGGCTTGGGGATTGCCACTAAGTACAGCTGACGGTTTCTCCCCGGACACTCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp GCCACAGAGAGGGGATCAACAGCGCTATCCCTGATCTACAGGCCCGTGCCCCCTGTGGGCATCAGAAAATaGACCATGCGGAGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: ATERGSTALSLIYRPVPPVGIRK*TMRSQR
Trigger: CCGCTGGCTCCGCATGGTTCATTTTCTGATGCCCAC...AGGGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTGATCCCCTCTCTGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp AACAGCCACCTCCTTGGGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCGAGAGGAGGAAGGGATaGCCTCTGATCCAAGGGACG +
Preference number: 4 (lower is better)
Translates to: NSHLLGALQAAGKCQWPLERRKG*PLIQGT
Trigger: CGTCCCTTGGATCAGAGGTCATCCCTTCCTCCTCTC...GAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCCCAAGGAGGTGGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp GAGAGGGGATCAACAGCGCTATCCCTGATCTACAGGCCCGTGCCCCCTCCCAAGGAGAGGAGGAAGGGATaGCCTCTGATCCAAGGGACG +
Preference number: 4 (lower is better)
Translates to: ERGSTALSLIYRPVPPPKERRKG*PLIQGT
Trigger: CGTCCCTTGGATCAGAGGTCATCCCTTCCTCCTCTC...CTTGGGAGGGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTGATCCCCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp GGGATGACCTCTGATCCAAGGGACGTCGAGGCCCACCAGGGAATCCCGAACCTCGCAGAGTGTCCTTCATaGCCTAGGACAGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: GMTSDPRDVEAHQGIPNLAECPS*PRTGGQ
Trigger: CTGACCCCCTGTCCTAGGTCATGAAGGACACTCTGC...GAGGTTCGGGATTCCCTGGTGGGCCTCGACGTCCCTTGGATCAGAGGTCATCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp CTGAGGGCCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACACTGTGGGGGCTGGGGTaGTCCTTAAGGGCACTTCTC +
Preference number: 4 (lower is better)
Translates to: LRASFMGLQQGTQRVGATLWGLG*SLRALL
Trigger: GAGAAGTGCCCTTAAGGATCACCCCAGCCCCCACAG...TGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGGCCCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp GGGCCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACAGAGAAGGCAGACAAACTCCTaGCGGTCCAGCTGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: GPASWVCSKGPNGLEPQRRQTNS*RSSCSA
Trigger: TGCGCTGCAGCTGGACCGGCAGGAGTTTGTCTGCCT...TCTCTGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp CCAAGGGACGTCGAGGCCCACCAGGGAATCCCGAACCTCCTCCCCGGACCTGCACAAGTCTGCTTGGCTTaGAGCATTTCGATGAGCAGG +
Preference number: 4 (lower is better)
Translates to: PRDVEAHQGIPNLLPGPAQVCLA*SISMSR
Trigger: CCTGCTCATCGAAATGCTGCAAGCCAAGCAGACTTG...TGCAGGTCCGGGGAGGAGGTTCGGGATTCCCTGGTGGGCCTCGACGTCCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp AACAGCCACCTCCTTGGGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCGCGTCTTGTCGATCTTaGAGCTCTGGCTCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: NSHLLGALQAAGKCQWPLASCRS*SSGSRC
Trigger: GCACCGAGAGCCAGAGCTGCAAGATCGACAAGACGC...GAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCCCAAGGAGGTGGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp GGGATGACCTCTGATCCAAGGGACGTCGAGGCCCACCAGGGAATCCCGAACCTCGGACAGCGCTTGCGCTaGGTCTTGTCGATCTTGCAG +
Preference number: 4 (lower is better)
Translates to: GMTSDPRDVEAHQGIPNLGQRLR*VLSILQ
Trigger: CTGCAAGATCGACAAGACGCAGCGCAAGCGCTGTCC...GAGGTTCGGGATTCCCTGGTGGGCCTCGACGTCCCTTGGATCAGAGGTCATCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp GAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTACCAAACGTTCTCCTTGTTGGGCTCAGGCCCATaGAGGCTGGGAGGCAGCACG +
Preference number: 4 (lower is better)
Translates to: EGHLWVGLGCRLYQTFSLLGSGP*RLGGST
Trigger: CGTGCTGCCTCCCAGCCTGCATGGGCCTGAGCCCAA...CAAGGAGAACGTTTGGTACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp GGCGAGTGTCCGGGGAGAAACCGTCAGCTGTACTTAGTGGCAATCCCCAAGCCCTCATCCGGCTCCAGCTaGAGCAGCTGCAGGATGAGC +
Preference number: 4 (lower is better)
Translates to: GECPGRNRQLYLVAIPKPSSGSS*SSCRMS
Trigger: GCTCATCCTGCAGCTGCTGCAGCTGGAGCCGGATGA...GGGCTTGGGGATTGCCACTAAGTACAGCTGACGGTTTCTCCCCGGACACTCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp CTTAGTAGGCGAGTGTCCGGGGAGAAACCGTCAGCTGTACTTAGTGGCAATCCCCGGGGCGGCTTTTGGTaGGCTCCTGCAGGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: LSRRVSGEKPSAVLSGNPRGGFW*APAGSP
Trigger: TGGGCTGCCTGCAGGAGCCCACCAAAAGCCGCCCCG...GGGATTGCCACTAAGTACAGCTGACGGTTTCTCCCCGGACACTCGCCTACTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp CTTAGTAGGCGAGTGTCCGGGGAGAAACCGTCAGCTGTACTTAGTGGCAATCCCAGCAGCGAGCCCGCCTaGGTGGCCACTGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LSRRVSGEKPSAVLSGNPSSEPA*VATVVS
Trigger: GCTGACCACAGTGGCCACCCAGGCGGGCTCGCTGCT...GGGATTGCCACTAAGTACAGCTGACGGTTTCTCCCCGGACACTCGCCTACTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp AACAGCCACCTCCTTGGGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCCACAGCAGCAGCTGCTaGAATTTGTCCCCGCAGTGC +
Preference number: 4 (lower is better)
Translates to: NSHLLGALQAAGKCQWPLHSSSC*NLSPQC
Trigger: GCACTGCGGGGACAAATTCCAGCAGCTGCTGCTGTG...GAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCCCAAGGAGGTGGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp CTGAGGGCCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACAGGTACAGGTACTCCTTaGCCTGCATGCTCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: LRASFMGLQQGTQRVGATGTGTP*PACSGP
Trigger: GGGCCCTGAGCATGCAGGCCAAGGAGTACCTGTACC...TGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGGCCCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp GAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTACCAAACGTTCTCCTTGGCAGGCAAGTGCCAGTaGCCACTCCACCTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: EGHLWVGLGCRLYQTFSLAGKCQ*PLHLRQ
Trigger: CTGGCGGAGGTGGAGTGGCCACTGGCACTTGCCTGC...CAAGGAGAACGTTTGGTACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp GCCACAGAGAGGGGATCAACAGCGCTATCCCTGATCTACAGGCCCGTGCCCCCTCTTGCAGAGGTCAGGTaGGGTAGAAGGGCTAGGGAG +
Preference number: 4 (lower is better)
Translates to: ATERGSTALSLIYRPVPPLAEVR*GRRARE
Trigger: CTCCCTAGCCCTTCTACCCCACCTGACCTCTGCAAG...AGGGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTGATCCCCTCTCTGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp CCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACAGAGAGGGGCAACAGCGCTTCTCTaGATTGGGGCTGGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PASWVCSKGPNGLEPQRGATALL*IGAGAQ
Trigger: CTGAGCCCCAGCCCCAATCCAGAGAAGCGCTGTTGC...CCCTCTCTGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp GGCGAGTGTCCGGGGAGAAACCGTCAGCTGTACTTAGTGGCAATCCCCAAGCCCTGTTCACCTAGTGGGTaGAGGGCGGGCAACAGCGCT +
Preference number: 4 (lower is better)
Translates to: GECPGRNRQLYLVAIPKPCSPSG*RAGNSA
Trigger: AGCGCTGTTGCCCGCCCTCCACCCACTAGGTGAACA...GGGCTTGGGGATTGCCACTAAGTACAGCTGACGGTTTCTCCCCGGACACTCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp GACCTAGGACAGGGGGTCAGGGAGCTGAGGGCCAGCTTCATGGGTTTGCAGCAAAGGGACCCAACGGGTTaGAGCCACAGAGAGGGGATC +
Preference number: 4 (lower is better)
Translates to: DLGQGVRELRASFMGLQQRDPTG*SHREGI
Trigger: GATCCCCTCTCTGTGGCTCCAACCCGTTGGGTCCCT...TTGCTGCAAACCCATGAAGCTGGCCCTCAGCTCCCTGACCCCCTGTCCTAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp GCCACAGAGAGGGGATCAACAGCGCTATCCCTGATCTACAGGCCCGTGCCCCCTAGTCCACGATGGAGATaGAGGTCTGGTCGGCCATTC +
Preference number: 4 (lower is better)
Translates to: ATERGSTALSLIYRPVPPSPRWR*RSGRPF
Trigger: GAATGGCCGACCAGACCTTCATCTCCATCGTGGACT...AGGGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTGATCCCCTCTCTGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp AATACCAGCCTGGGAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTACCAGGAAGGGATGACCTCTaGTCCAAGGGACGTCGAGGC +
Preference number: 4 (lower is better)
Translates to: NTSLGGPPLGGARMSIVPGRDDL*SKGRRG
Trigger: GCCTCGACGTCCCTTGGATCAGAGGTCATCCCTTCC...TGGTACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTCCCAGGCTGGTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp GAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTACCAAACGTTCTCCTTGCCACCCACAGAGACCTaGAGCCCCCAACAGGGCATC +
Preference number: 4 (lower is better)
Translates to: EGHLWVGLGCRLYQTFSLPPTET*SPQQGI
Trigger: GATGCCCTGTTGGGGGCTTCAGGTCTCTGTGGGTGG...CAAGGAGAACGTTTGGTACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp AGAAACCGTCAGCTGTACTTAGTGGCAATCCCCAAGCCCCAGCTTCAGTCCTCAGCAGGCAGCCCAAGATaGGGGCCCGCACCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: RNRQLYLVAIPKPQLQSSAGSPR*GPAPGP
Trigger: AGGACCAGGTGCGGGCCCGCATCTTGGGCTGCCTGC...TGAGGACTGAAGCTGGGGCTTGGGGATTGCCACTAAGTACAGCTGACGGTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp CTTAGTAGGCGAGTGTCCGGGGAGAAACCGTCAGCTGTACTTAGTGGCAATCCCGGATGCTGCCCTCCTTaGCGTGCTGGACCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: LSRRVSGEKPSAVLSGNPGCCPP*RAGPGG
Trigger: ACCGCCAGGTCCAGCACGGCAAGGAGGGCAGCATCC...GGGATTGCCACTAAGTACAGCTGACGGTTTCTCCCCGGACACTCGCCTACTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373588.9
CDS-3UTR GCA 90 bp GAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTACCAAACGTTCTCCTTGAGGTACTCCTTGGCCTaGATGCTCAGGGCCCGCACC +
Preference number: 4 (lower is better)
Translates to: EGHLWVGLGCRLYQTFSLRYSLA*MLRART
Trigger: GGTGCGGGCCCTGAGCATGCAGGCCAAGGAGTACCT...CAAGGAGAACGTTTGGTACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp GAGAGGGGATCAACAGCGCTATCCCTGATCTACAGGCCCGTGCCCCCTCCCAAGAGAAGGGACAGCGCTTaGGCTGCGTCTTGTCGATCT +
Preference number: 4 (lower is better)
Translates to: ERGSTALSLIYRPVPPPKRRDSA*AASCRS
Trigger: AGATCGACAAGACGCAGCGCAAGCGCTGTCCCTTCT...CTTGGGAGGGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTGATCCCCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp CCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACAGAGAGGGCCCAACAGGGCATCCTaGTGTTCACCTAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PASWVCSKGPNGLEPQRGPNRAS*CSPSGW
Trigger: CCACCCACTAGGTGAACAGCAGGATGCCCTGTTGGG...CCCTCTCTGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp AACAGCCACCTCCTTGGGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCTTGCCCAGGTGCTTGTaGTACAGGTACTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: NSHLLGALQAAGKCQWPLLPRCL*YRYSLA
Trigger: GGCCAAGGAGTACCTGTACCACAAGCACCTGGGCAA...GAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCCCAAGGAGGTGGCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp AGAAACCGTCAGCTGTACTTAGTGGCAATCCCCAAGCCCCAGCTTCAGTCCTCAAGCCGGACAGCAGGCTaGCCCTGTCCGTCCGTCCTC +
Preference number: 4 (lower is better)
Translates to: RNRQLYLVAIPKPQLQSSSRTAG*PCPSVL
Trigger: GAGGACGGACGGACAGGGCCAGCCTGCTGTCCGGCT...TGAGGACTGAAGCTGGGGCTTGGGGATTGCCACTAAGTACAGCTGACGGTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620110.4
3UTR CAA 72 bp CCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTaGGAGCCACAGAGAGGGGATCAACAGCGCTATCCC +
Preference number: 4 (lower is better)
Translates to: PASWVCSKGPNG*EPQRGDQQRYP
Trigger: GGGATAGCGCTGTTGATCCCCTCTCTGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp ATAAATACCAGCCTGGGAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTACAACAGCGCTATCCCTaGTCTACAGGCCCGTGCCCC +
Preference number: 4 (lower is better)
Translates to: INTSLGGPPLGGARMSIVQQRYP*STGPCP
Trigger: GGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTG...TACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTCCCAGGCTGGTATTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp AATACCAGCCTGGGAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTACCAAGGCACAGCAGCAGCTaGTGGAATTTGTCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: NTSLGGPPLGGARMSIVPRHSSS*WNLSPQ
Trigger: CTGCGGGGACAAATTCCAGCAGCTGCTGCTGTGCCT...TGGTACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTCCCAGGCTGGTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp CTTAGTAGGCGAGTGTCCGGGGAGAAACCGTCAGCTGTACTTAGTGGCAATCCCGGTGGCGACTGTGGGTaGGCAGAAACCCCCTCACAC +
Preference number: 4 (lower is better)
Translates to: LSRRVSGEKPSAVLSGNPGGDCG*AETPSH
Trigger: GTGTGAGGGGGTTTCTGCGCACCCACAGTCGCCACC...GGGATTGCCACTAAGTACAGCTGACGGTTTCTCCCCGGACACTCGCCTACTAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp GCCACAGAGAGGGGATCAACAGCGCTATCCCTGATCTACAGGCCCGTGCCCCCTAGCTCTGGCTCTCGGTaGACGTGTAGTGCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: ATERGSTALSLIYRPVPPSSGSR*TCSACC
Trigger: ACAACAAGCACTACACGTGCACCGAGAGCCAGAGCT...AGGGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTGATCCCCTCTCTGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp AACAGCCACCTCCTTGGGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCTCAGAAAATGAACCATaGGGAGCCAGCGGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: NSHLLGALQAAGKCQWPLSENEP*GASGVA
Trigger: AGCCACACCGCTGGCTCCGCATGGTTCATTTTCTGA...GAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCCCAAGGAGGTGGCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp GAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTACCAAACGTTCTCCTTGGGTACAGGTACTCCTTaGCCTGCATGCTCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: EGHLWVGLGCRLYQTFSLGTGTP*PACSGP
Trigger: GGGCCCTGAGCATGCAGGCCAAGGAGTACCTGTACC...CAAGGAGAACGTTTGGTACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp CCAGGGAATCCCGAACCTCCTCCCCGGACCTGCAGGCTTCAGACTCCAGGAGAGAACGTTCTCCTTGGGTaGGAGAGGGAATCAGTGATG +
Preference number: 4 (lower is better)
Translates to: PGNPEPPPRTCRLQTPGENVLLG*ERESVM
Trigger: CATCACTGATTCCCTCTCCCACCCAAGGAGAACGTT...CTCTCCTGGAGTCTGAAGCCTGCAGGTCCGGGGAGGAGGTTCGGGATTCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp CTTAGTAGGCGAGTGTCCGGGGAGAAACCGTCAGCTGTACTTAGTGGCAATCCCTGGGAGGGCCACCTCTaGGTGGGGCTAGGATGTCGA +
Preference number: 4 (lower is better)
Translates to: LSRRVSGEKPSAVLSGNPWEGHL*VGLGCR
Trigger: TCGACATCCTAGCCCCACCCAGAGGTGGCCCTCCCA...GGGATTGCCACTAAGTACAGCTGACGGTTTCTCCCCGGACACTCGCCTACTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp GAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTACCAAACGTTCTCCTTGGTGGGTCTCCGGCCTTaGCAGGGGCACATGTTTCAG +
Preference number: 4 (lower is better)
Translates to: EGHLWVGLGCRLYQTFSLVGLRP*QGHMFQ
Trigger: CTGAAACATGTGCCCCTGCCAAGGCCGGAGACCCAC...CAAGGAGAACGTTTGGTACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp GAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTACCAAACGTTCTCCTTGGACCATGCACCTGCGTaGCCAGTCCACGATGGAGAT +
Preference number: 4 (lower is better)
Translates to: EGHLWVGLGCRLYQTFSLDHAPA*PVHDGD
Trigger: ATCTCCATCGTGGACTGGGCACGCAGGTGCATGGTC...CAAGGAGAACGTTTGGTACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp GGGCCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACAGAGAATCTCGTTGCCCAGGTaGTTGTGGTACAGGTACTCC +
Preference number: 4 (lower is better)
Translates to: GPASWVCSKGPNGLEPQRISLPR*LWYRYS
Trigger: GGAGTACCTGTACCACAAGCACCTGGGCAACGAGAT...TCTCTGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp CCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACAGAGAGGGAGCTCTGGCTCTCGGTaGACGTGTAGTGCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: PASWVCSKGPNGLEPQRGSSGSR*TCSACC
Trigger: ACAACAAGCACTACACGTGCACCGAGAGCCAGAGCT...CCCTCTCTGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp AATACCAGCCTGGGAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTACCAAGAAGGGACAGCGCTTaGGCTGCGTCTTGTCGATCT +
Preference number: 4 (lower is better)
Translates to: NTSLGGPPLGGARMSIVPRRDSA*AASCRS
Trigger: AGATCGACAAGACGCAGCGCAAGCGCTGTCCCTTCT...TGGTACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTCCCAGGCTGGTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp ATAAATACCAGCCTGGGAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTATCCAGCTGCAGCAGCTaGAGGATGAGCTCAGGCACG +
Preference number: 4 (lower is better)
Translates to: INTSLGGPPLGGARMSIVSSCSS*RMSSGT
Trigger: CGTGCCTGAGCTCATCCTGCAGCTGCTGCAGCTGGA...TACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTCCCAGGCTGGTATTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp GCCACAGAGAGGGGATCAACAGCGCTATCCCTGATCTACAGGCCCGTGCCCCCTCCCCTAGTTGATACCTaGTCAACTTCTCCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: ATERGSTALSLIYRPVPPPLVDT*STSPCL
Trigger: CAGACAGGGAGAAGTTGAGCAGGTATCAACTAGGGG...AGGGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTGATCCCCTCTCTGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp GAGAGGGGATCAACAGCGCTATCCCTGATCTACAGGCCCGTGCCCCCTCCCAAGCCGATGATGTATCAATaGCCCCTCTTGCAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: ERGSTALSLIYRPVPPPKPMMYQ*PLLQRS
Trigger: TGACCTCTGCAAGAGGGGGCATTGATACATCATCGG...CTTGGGAGGGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTGATCCCCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp CCAGGGAATCCCGAACCTCCTCCCCGGACCTGCAGGCTTCAGACTCCAGGAGAGAGGCTCAGCACAAGCTaGAACAGTAACATGAAAGCG +
Preference number: 4 (lower is better)
Translates to: PGNPEPPPRTCRLQTPGERLSTS*NSNMKA
Trigger: CGCTTTCATGTTACTGTTGCAGCTTGTGCTGAGCCT...CTCTCCTGGAGTCTGAAGCCTGCAGGTCCGGGGAGGAGGTTCGGGATTCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp AGAAACCGTCAGCTGTACTTAGTGGCAATCCCCAAGCCCCAGCTTCAGTCCTCATCCAGAGAAGGGCTCTaGGTAGCCGTACGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: RNRQLYLVAIPKPQLQSSSREGL*VAVRQP
Trigger: GGGCTGCCGTACGGCTACCCAGAGCCCTTCTCTGGA...TGAGGACTGAAGCTGGGGCTTGGGGATTGCCACTAAGTACAGCTGACGGTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp GAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTACCAAACGTTCTCCTTGCTTGCAGAGGTCAGGTaGGGTAGAAGGGCTAGGGAG +
Preference number: 4 (lower is better)
Translates to: EGHLWVGLGCRLYQTFSLLAEVR*GRRARE
Trigger: CTCCCTAGCCCTTCTACCCCACCTGACCTCTGCAAG...CAAGGAGAACGTTTGGTACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp GGGCCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACAGAGATCTCTGGATTGGGGCTaGGGCTCAGAAGTAATGACC +
Preference number: 4 (lower is better)
Translates to: GPASWVCSKGPNGLEPQRSLDWG*GSEVMT
Trigger: GGTCATTACTTCTGAGCCCCAGCCCCAATCCAGAGA...TCTCTGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp CTTAGTAGGCGAGTGTCCGGGGAGAAACCGTCAGCTGTACTTAGTGGCAATCCCGTGGGTCTCCGGCCTTaGCAGGGGCACATGTTTCAG +
Preference number: 4 (lower is better)
Translates to: LSRRVSGEKPSAVLSGNPVGLRP*QGHMFQ
Trigger: CTGAAACATGTGCCCCTGCCAAGGCCGGAGACCCAC...GGGATTGCCACTAAGTACAGCTGACGGTTTCTCCCCGGACACTCGCCTACTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp ATAAATACCAGCCTGGGAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTAGCCCTGTCTCCAGCTTaGAGCCATTGGCCCGAATCT +
Preference number: 4 (lower is better)
Translates to: INTSLGGPPLGGARMSIVALSPA*SHWPES
Trigger: AGATTCGGGCCAATGGCTTCAAGCTGGAGACAGGGC...TACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTCCCAGGCTGGTATTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp TGGTGCTTCACCCTGCAGAGTGTCCTTCATGACCTAGGACAGGGGGTCAGGGAGCTCTCCTCCCCTAGTTaGTACCTGCTCAACTTCTCC +
Preference number: 4 (lower is better)
Translates to: WCFTLQSVLHDLGQGVRELSSPS*YLLNFS
Trigger: GGAGAAGTTGAGCAGGTATCAACTAGGGGAGGAGAG...CTCCCTGACCCCCTGTCCTAGGTCATGAAGGACACTCTGCAGGGTGAAGCACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp AATACCAGCCTGGGAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTACCACTCTCCTCCCCTAGTTaGTACCTGCTCAACTTCTCC +
Preference number: 4 (lower is better)
Translates to: NTSLGGPPLGGARMSIVPLSSPS*YLLNFS
Trigger: GGAGAAGTTGAGCAGGTATCAACTAGGGGAGGAGAG...TGGTACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTCCCAGGCTGGTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp GAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTACCAAACGTTCTCCTTGGCTGCAACAGTAACATaGAAGCGGGACGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: EGHLWVGLGCRLYQTFSLAATVT*KRDGQQ
Trigger: CTGCTGTCCGTCCCGCTTTCATGTTACTGTTGCAGC...CAAGGAGAACGTTTGGTACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp AGAAACCGTCAGCTGTACTTAGTGGCAATCCCCAAGCCCCAGCTTCAGTCCTCACTTTTGGTGGGCTCCTaGAGGCAGCCCAAGATGCGG +
Preference number: 4 (lower is better)
Translates to: RNRQLYLVAIPKPQLQSSLLVGS*RQPKMR
Trigger: CCGCATCTTGGGCTGCCTGCAGGAGCCCACCAAAAG...TGAGGACTGAAGCTGGGGCTTGGGGATTGCCACTAAGTACAGCTGACGGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp CTTAGTAGGCGAGTGTCCGGGGAGAAACCGTCAGCTGTACTTAGTGGCAATCCCGACCATGCACCTGCGTaGCCAGTCCACGATGGAGAT +
Preference number: 4 (lower is better)
Translates to: LSRRVSGEKPSAVLSGNPDHAPA*PVHDGD
Trigger: ATCTCCATCGTGGACTGGGCACGCAGGTGCATGGTC...GGGATTGCCACTAAGTACAGCTGACGGTTTCTCCCCGGACACTCGCCTACTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp CCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACAGAGAGGGCAAGTCTGCTTGGCTTaGAGCATTTCGATGAGCAGG +
Preference number: 4 (lower is better)
Translates to: PASWVCSKGPNGLEPQRGQVCLA*SISMSR
Trigger: CCTGCTCATCGAAATGCTGCAAGCCAAGCAGACTTG...CCCTCTCTGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp ATAAATACCAGCCTGGGAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTAGGACAGCGCTTGCGCTaGGTCTTGTCGATCTTGCAG +
Preference number: 4 (lower is better)
Translates to: INTSLGGPPLGGARMSIVGQRLR*VLSILQ
Trigger: CTGCAAGATCGACAAGACGCAGCGCAAGCGCTGTCC...TACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTCCCAGGCTGGTATTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp GAGAGGGGATCAACAGCGCTATCCCTGATCTACAGGCCCGTGCCCCCTCCCAAGATTGGCCCGAATCTGTaGCTTCTTCTGCTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: ERGSTALSLIYRPVPPPKIGPNL*LLLLFQ
Trigger: CTGAAACAGCAGAAGAAGGCACAGATTCGGGCCAAT...CTTGGGAGGGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTGATCCCCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp GGCGAGTGTCCGGGGAGAAACCGTCAGCTGTACTTAGTGGCAATCCCCAAGCCCCCGATGATGTATCAATaGCCCCTCTTGCAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: GECPGRNRQLYLVAIPKPPMMYQ*PLLQRS
Trigger: TGACCTCTGCAAGAGGGGGCATTGATACATCATCGG...GGGCTTGGGGATTGCCACTAAGTACAGCTGACGGTTTCTCCCCGGACACTCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp TGGTGCTTCACCCTGCAGAGTGTCCTTCATGACCTAGGACAGGGGGTCAGGGAGATGGAGATGAAGGTCTaGTCGGCCATTCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: WCFTLQSVLHDLGQGVREMEMKV*SAILHR
Trigger: CCTGTGCAGAATGGCCGACCAGACCTTCATCTCCAT...CTCCCTGACCCCCTGTCCTAGGTCATGAAGGACACTCTGCAGGGTGAAGCACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp AGAAACCGTCAGCTGTACTTAGTGGCAATCCCCAAGCCCCAGCTTCAGTCCTCATGCAGCTCTCACACGTaGGCAGTCCGTAGTGGTAGC +
Preference number: 4 (lower is better)
Translates to: RNRQLYLVAIPKPQLQSSCSSHT*AVRSGS
Trigger: GCTACCACTACGGACTGCTCACGTGTGAGAGCTGCA...TGAGGACTGAAGCTGGGGCTTGGGGATTGCCACTAAGTACAGCTGACGGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp TGGTGCTTCACCCTGCAGAGTGTCCTTCATGACCTAGGACAGGGGGTCAGGGAGGGGAGAGGGAATCAGTaGTGCCTGGAGCAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: WCFTLQSVLHDLGQGVREGRGNQ*CLEQSF
Trigger: AAAACTTTGCTCCAGGCATCACTGATTCCCTCTCCC...CTCCCTGACCCCCTGTCCTAGGTCATGAAGGACACTCTGCAGGGTGAAGCACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp CAAACTCGGTTATCCTTAGTTTACAAAACAGAGGCTCTCCCTCCTGGTCTCTATCGCAACACCAGGCTGTaGAGCAGCGAGCCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: QTRLSLVYKTEALPPGLYRNTRL*SSEPAW
Trigger: CCAGGCGGGCTCGCTGCTGCACAGCCTGGTGTTGCG...ATAGAGACCAGGAGGGAGAGCCTCTGTTTTGTAAACTAAGGATAACCGAGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp AAACGTTCTCCTTGGGTGGGAGAGGGAATCAGTGATGCCTGGAGCAAAGTTTTTCCTCCTCCCCGGACCTaGAGGCTTCAGACTCCAGGA +
Preference number: 4 (lower is better)
Translates to: KRSPWVGEGISDAWSKVFPPPRT*RLQTPG
Trigger: TCCTGGAGTCTGAAGCCTGCAGGTCCGGGGAGGAGG...AAAAACTTTGCTCCAGGCATCACTGATTCCCTCTCCCACCCAAGGAGAACGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp CAAACTCGGTTATCCTTAGTTTACAAAACAGAGGCTCTCCCTCCTGGTCTCTATGGTCGGGGCGGCTTTTaGTGGGCTCCTGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: QTRLSLVYKTEALPPGLYGRGGF*WAPAGS
Trigger: GCTGCCTGCAGGAGCCCACCAAAAGCCGCCCCGACC...ATAGAGACCAGGAGGGAGAGCCTCTGTTTTGTAAACTAAGGATAACCGAGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp ATTTATTCCAGGGCTGTGGGGGCTGGGGTGATCCTTAAGGGCACTTCTCGTTTCTTGCCCAGGTGCTTGTaGTACAGGTACTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: IYSRAVGAGVILKGTSRFLPRCL*YRYSLA
Trigger: GGCCAAGGAGTACCTGTACCACAAGCACCTGGGCAA...GAAACGAGAAGTGCCCTTAAGGATCACCCCAGCCCCCACAGCCCTGGAATAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp AGAAACCGTCAGCTGTACTTAGTGGCAATCCCCAAGCCCCAGCTTCAGTCCTCAAGCGCTTCTCTGGATTaGGGCTGGGGCTCAGAAGTA +
Preference number: 4 (lower is better)
Translates to: RNRQLYLVAIPKPQLQSSSASLD*GWGSEV
Trigger: TACTTCTGAGCCCCAGCCCCAATCCAGAGAAGCGCT...TGAGGACTGAAGCTGGGGCTTGGGGATTGCCACTAAGTACAGCTGACGGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp ATTTATTCCAGGGCTGTGGGGGCTGGGGTGATCCTTAAGGGCACTTCTCGTTTCAGCGCTTCTCTGGATTaGGGCTGGGGCTCAGAAGTA +
Preference number: 4 (lower is better)
Translates to: IYSRAVGAGVILKGTSRFSASLD*GWGSEV
Trigger: TACTTCTGAGCCCCAGCCCCAATCCAGAGAAGCGCT...GAAACGAGAAGTGCCCTTAAGGATCACCCCAGCCCCCACAGCCCTGGAATAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp CAAACTCGGTTATCCTTAGTTTACAAAACAGAGGCTCTCCCTCCTGGTCTCTATCGCTCTCACACCGGATaGGGGTGGCAGTGGGCACCA +
Preference number: 4 (lower is better)
Translates to: QTRLSLVYKTEALPPGLYRSHTG*GWQWAP
Trigger: TGGTGCCCACTGCCACCCTCATCCGGTGTGAGAGCG...ATAGAGACCAGGAGGGAGAGCCTCTGTTTTGTAAACTAAGGATAACCGAGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp ATTTATTCCAGGGCTGTGGGGGCTGGGGTGATCCTTAAGGGCACTTCTCGTTTCCCTCCCAAGTTCACTTaGATTCCCACCCACAGAGAC +
Preference number: 4 (lower is better)
Translates to: IYSRAVGAGVILKGTSRFPPKFT*IPTHRD
Trigger: GTCTCTGTGGGTGGGAATGCAAGTGAACTTGGGAGG...GAAACGAGAAGTGCCCTTAAGGATCACCCCAGCCCCCACAGCCCTGGAATAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp CTTAGTAGGCGAGTGTCCGGGGAGAAACCGTCAGCTGTACTTAGTGGCAATCCCAACGTTCTCCTTGGGTaGGAGAGGGAATCAGTGATG +
Preference number: 4 (lower is better)
Translates to: LSRRVSGEKPSAVLSGNPNVLLG*ERESVM
Trigger: CATCACTGATTCCCTCTCCCACCCAAGGAGAACGTT...GGGATTGCCACTAAGTACAGCTGACGGTTTCTCCCCGGACACTCGCCTACTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp CTTAGTAGGCGAGTGTCCGGGGAGAAACCGTCAGCTGTACTTAGTGGCAATCCCACCAAACGTTCTCCTTaGGTGGGAGAGGGAATCAGT +
Preference number: 4 (lower is better)
Translates to: LSRRVSGEKPSAVLSGNPTKRSP*VGEGIS
Trigger: ACTGATTCCCTCTCCCACCCAAGGAGAACGTTTGGT...GGGATTGCCACTAAGTACAGCTGACGGTTTCTCCCCGGACACTCGCCTACTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp AAACGTTCTCCTTGGGTGGGAGAGGGAATCAGTGATGCCTGGAGCAAAGTTTTTAGGCACAGCAGCAGCTaGTGGAATTTGTCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: KRSPWVGEGISDAWSKVFRHSSS*WNLSPQ
Trigger: CTGCGGGGACAAATTCCAGCAGCTGCTGCTGTGCCT...AAAAACTTTGCTCCAGGCATCACTGATTCCCTCTCCCACCCAAGGAGAACGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp AAACGTTCTCCTTGGGTGGGAGAGGGAATCAGTGATGCCTGGAGCAAAGTTTTTCCCAACAGGGCATCCTaGTGTTCACCTAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: KRSPWVGEGISDAWSKVFPNRAS*CSPSGW
Trigger: CCACCCACTAGGTGAACAGCAGGATGCCCTGTTGGG...AAAAACTTTGCTCCAGGCATCACTGATTCCCTCTCCCACCCAAGGAGAACGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp CAAACTCGGTTATCCTTAGTTTACAAAACAGAGGCTCTCCCTCCTGGTCTCTATTCCAGAGAAGGGCTCTaGGTAGCCGTACGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: QTRLSLVYKTEALPPGLYSREGL*VAVRQP
Trigger: GGGCTGCCGTACGGCTACCCAGAGCCCTTCTCTGGA...ATAGAGACCAGGAGGGAGAGCCTCTGTTTTGTAAACTAAGGATAACCGAGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp CAAACTCGGTTATCCTTAGTTTACAAAACAGAGGCTCTCCCTCCTGGTCTCTATCTCGTTTCAGGGCTGTaGGTCTCCGGCCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: QTRLSLVYKTEALPPGLYLVSGL*VSGLGR
Trigger: CCTGCCAAGGCCGGAGACCCACAGCCCTGAAACGAG...ATAGAGACCAGGAGGGAGAGCCTCTGTTTTGTAAACTAAGGATAACCGAGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp AAACGTTCTCCTTGGGTGGGAGAGGGAATCAGTGATGCCTGGAGCAAAGTTTTTCTTGCAGCATTTCGATaGGCAGGTTGTTGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: KRSPWVGEGISDAWSKVFLAAFR*AGCCGA
Trigger: TGCCCCGCAACAACCTGCTCATCGAAATGCTGCAAG...AAAAACTTTGCTCCAGGCATCACTGATTCCCTCTCCCACCCAAGGAGAACGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp CAAACTCGGTTATCCTTAGTTTACAAAACAGAGGCTCTCCCTCCTGGTCTCTATCTTTTGGTGGGCTCCTaGAGGCAGCCCAAGATGCGG +
Preference number: 4 (lower is better)
Translates to: QTRLSLVYKTEALPPGLYLLVGS*RQPKMR
Trigger: CCGCATCTTGGGCTGCCTGCAGGAGCCCACCAAAAG...ATAGAGACCAGGAGGGAGAGCCTCTGTTTTGTAAACTAAGGATAACCGAGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp AAACGTTCTCCTTGGGTGGGAGAGGGAATCAGTGATGCCTGGAGCAAAGTTTTTGCCCAGGCTCAAGTCTaGTTGGCTTGCAGCATTTCG +
Preference number: 4 (lower is better)
Translates to: KRSPWVGEGISDAWSKVFAQAQV*LACSIS
Trigger: CGAAATGCTGCAAGCCAAGCAGACTTGAGCCTGGGC...AAAAACTTTGCTCCAGGCATCACTGATTCCCTCTCCCACCCAAGGAGAACGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp AAACGTTCTCCTTGGGTGGGAGAGGGAATCAGTGATGCCTGGAGCAAAGTTTTTATCTGTGCCTTCTTCTaGTGTTTCAGGGCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: KRSPWVGEGISDAWSKVFICAFF*CFRARS
Trigger: GGACCGGGCCCTGAAACAGCAGAAGAAGGCACAGAT...AAAAACTTTGCTCCAGGCATCACTGATTCCCTCTCCCACCCAAGGAGAACGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp AGAAACCGTCAGCTGTACTTAGTGGCAATCCCCAAGCCCCAGCTTCAGTCCTCAATTGGCCCGAATCTGTaGCTTCTTCTGCTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: RNRQLYLVAIPKPQLQSSIGPNL*LLLLFQ
Trigger: CTGAAACAGCAGAAGAAGGCACAGATTCGGGCCAAT...TGAGGACTGAAGCTGGGGCTTGGGGATTGCCACTAAGTACAGCTGACGGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp GACCTAGGACAGGGGGTCAGGGAGCTGAGGGCCAGCTTCATGGGTTTGCAGCAATCTTTCACCAGGATGTaGTTATTCAGGAACTTCAAA +
Preference number: 4 (lower is better)
Translates to: DLGQGVRELRASFMGLQQSFTRM*LFRNFK
Trigger: TTTGAAGTTCCTGAATAACCACATCCTGGTGAAAGA...TTGCTGCAAACCCATGAAGCTGGCCCTCAGCTCCCTGACCCCCTGTCCTAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp CAAACTCGGTTATCCTTAGTTTACAAAACAGAGGCTCTCCCTCCTGGTCTCTATCCCTCCTGGTCTCTATaGGGGGAACACTGGAGACCC +
Preference number: 4 (lower is better)
Translates to: QTRLSLVYKTEALPPGLYPSWSL*GEHWRP
Trigger: GGGTCTCCAGTGTTCCCCCCATAGAGACCAGGAGGG...ATAGAGACCAGGAGGGAGAGCCTCTGTTTTGTAAACTAAGGATAACCGAGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp CAAACTCGGTTATCCTTAGTTTACAAAACAGAGGCTCTCCCTCCTGGTCTCTATTGTTCACCTAGTGGGTaGAGGGCGGGCAACAGCGCT +
Preference number: 4 (lower is better)
Translates to: QTRLSLVYKTEALPPGLYCSPSG*RAGNSA
Trigger: AGCGCTGTTGCCCGCCCTCCACCCACTAGGTGAACA...ATAGAGACCAGGAGGGAGAGCCTCTGTTTTGTAAACTAAGGATAACCGAGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp CAAACTCGGTTATCCTTAGTTTACAAAACAGAGGCTCTCCCTCCTGGTCTCTATGTGGGCATCAGAAAATaGACCATGCGGAGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: QTRLSLVYKTEALPPGLYVGIRK*TMRSQR
Trigger: CCGCTGGCTCCGCATGGTTCATTTTCTGATGCCCAC...ATAGAGACCAGGAGGGAGAGCCTCTGTTTTGTAAACTAAGGATAACCGAGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp AAACGTTCTCCTTGGGTGGGAGAGGGAATCAGTGATGCCTGGAGCAAAGTTTTTATCTCGTTGCCCAGGTaGTTGTGGTACAGGTACTCC +
Preference number: 4 (lower is better)
Translates to: KRSPWVGEGISDAWSKVFISLPR*LWYRYS
Trigger: GGAGTACCTGTACCACAAGCACCTGGGCAACGAGAT...AAAAACTTTGCTCCAGGCATCACTGATTCCCTCTCCCACCCAAGGAGAACGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp CAAACTCGGTTATCCTTAGTTTACAAAACAGAGGCTCTCCCTCCTGGTCTCTATTGCGGGGCATCTCGTTaGCCAGGTGCTTGTGGTACA +
Preference number: 4 (lower is better)
Translates to: QTRLSLVYKTEALPPGLYCGASR*PGACGT
Trigger: TGTACCACAAGCACCTGGGCAACGAGATGCCCCGCA...ATAGAGACCAGGAGGGAGAGCCTCTGTTTTGTAAACTAAGGATAACCGAGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp CAAACTCGGTTATCCTTAGTTTACAAAACAGAGGCTCTCCCTCCTGGTCTCTATGCGTCTTGTCGATCTTaGAGCTCTGGCTCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: QTRLSLVYKTEALPPGLYASCRS*SSGSRC
Trigger: GCACCGAGAGCCAGAGCTGCAAGATCGACAAGACGC...ATAGAGACCAGGAGGGAGAGCCTCTGTTTTGTAAACTAAGGATAACCGAGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR TCA 90 bp CAAACTCGGTTATCCTTAGTTTACAAAACAGAGGCTCTCCCTCCTGGTCTCTATAGTCCACGATGGAGATaGAGGTCTGGTCGGCCATTC +
Preference number: 4 (lower is better)
Translates to: QTRLSLVYKTEALPPGLYSPRWR*RSGRPF
Trigger: GAATGGCCGACCAGACCTTCATCTCCATCGTGGACT...ATAGAGACCAGGAGGGAGAGCCTCTGTTTTGTAAACTAAGGATAACCGAGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp GAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTACCAAACGTTCTCCTTGTCTTTCACCAGGATGTaGTTATTCAGGAACTTCAAA +
Preference number: 4 (lower is better)
Translates to: EGHLWVGLGCRLYQTFSLSFTRM*LFRNFK
Trigger: TTTGAAGTTCCTGAATAACCACATCCTGGTGAAAGA...CAAGGAGAACGTTTGGTACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR GCA 90 bp AAACGTTCTCCTTGGGTGGGAGAGGGAATCAGTGATGCCTGGAGCAAAGTTTTTAGGCTCAGCACAAGCTaGAACAGTAACATGAAAGCG +
Preference number: 4 (lower is better)
Translates to: KRSPWVGEGISDAWSKVFRLSTS*NSNMKA
Trigger: CGCTTTCATGTTACTGTTGCAGCTTGTGCTGAGCCT...AAAAACTTTGCTCCAGGCATCACTGATTCCCTCTCCCACCCAAGGAGAACGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CCA 90 bp CAAACTCGGTTATCCTTAGTTTACAAAACAGAGGCTCTCCCTCCTGGTCTCTATACCAAACGTTCTCCTTaGGTGGGAGAGGGAATCAGT +
Preference number: 4 (lower is better)
Translates to: QTRLSLVYKTEALPPGLYTKRSP*VGEGIS
Trigger: ACTGATTCCCTCTCCCACCCAAGGAGAACGTTTGGT...ATAGAGACCAGGAGGGAGAGCCTCTGTTTTGTAAACTAAGGATAACCGAGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS CCA 90 bp CAGGTGGACCGGCGGCCAGGCCCTTGGGCTCAGGCCCATGCAGGCTaGGAGGCAGCACGTAGTCCGGTGCGGGAGGGGGCGGCGGGGGCA +
Preference number: 5 (lower is better)
Translates to: QVDRRPGPWAQAHAG*EAARSPVREGAAGA
Trigger: TGCCCCCGCCGCCCCCTCCCGCACCGGACTACGTGCTGCCTCCCAGCCTGCATGGGCCTGAGCCCAAGGGCCTGGCCGCCGGTCCACCTG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373588.9
ENST00000455734.1
ENST00000620110.4
CDS GCA 90 bp AGGGGGAGGCTCCGGCAGCCCAGGTGGGACGGTGGCGACTGTGGGTaGGCAGAAACCCCCTCACACCACGGCGGGCGGCAGCCGGACAGC +
Preference number: 5 (lower is better)
Translates to: RGRLRQPRWDGGDCG*AETPSHHGGRQPDS
Trigger: GCTGTCCGGCTGCCGCCCGCCGTGGTGTGAGGGGGTTTCTGCGCACCCACAGTCGCCACCGTCCCACCTGGGCTGCCGGAGCCTCCCCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS CCA 90 bp GTCCAGGGGGAGGCTCCGGCAGCCCAGGTGGGACGGTGGCGACTGTaGGTGCGCAGAAACCCCCTCACACCACGGCGGGCGGCAGCCGGA +
Preference number: 5 (lower is better)
Translates to: VQGEAPAAQVGRWRL*VRRNPLTPRRAAAG
Trigger: TCCGGCTGCCGCCCGCCGTGGTGTGAGGGGGTTTCTGCGCACCCACAGTCGCCACCGTCCCACCTGGGCTGCCGGAGCCTCCCCCTGGAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS GCA 90 bp AGGCCGAAGGCCGCCGGCTGGTCGGGGCGGCTTTTGGTGGGCTCCTaGAGGCAGCCCAAGATGCGGGCCCGCACCTGGTCCTCATCCGGC +
Preference number: 5 (lower is better)
Translates to: RPKAAGWSGRLLVGS*RQPKMRARTWSSSG
Trigger: GCCGGATGAGGACCAGGTGCGGGCCCGCATCTTGGGCTGCCTGCAGGAGCCCACCAAAAGCCGCCCCGACCAGCCGGCGGCCTTCGGCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373587.3
ENST00000373588.9
ENST00000620110.4
CDS CCA 90 bp CATGGGCAGTGCTGGGGCCCCAAAGTCGCCCAGTGGCCCAGCAGGTaGACCGGCGGCCAGGCCCTTGGGCTCAGGCCCATGCAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: HGQCWGPKVAQWPSR*TGGQALGLRPMQAG
Trigger: CCCAGCCTGCATGGGCCTGAGCCCAAGGGCCTGGCCGCCGGTCCACCTGCTGGGCCACTGGGCGACTTTGGGGCCCCAGCACTGCCCATG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373588.9
ENST00000455734.1
ENST00000620110.4
CDS CCA 90 bp TGCACAGGAGGCCGAAGGCCGCCGGCTGGTCGGGGCGGCTTTTGGTaGGCTCCTGCAGGCAGCCCAAGATGCGGGCCCGCACCTGGTCCT +
Preference number: 5 (lower is better)
Translates to: CTGGRRPPAGRGGFW*APAGSPRCGPAPGP
Trigger: AGGACCAGGTGCGGGCCCGCATCTTGGGCTGCCTGCAGGAGCCCACCAAAAGCCGCCCCGACCAGCCGGCGGCCTTCGGCCTCCTGTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373587.3
ENST00000373588.9
ENST00000620110.4
CDS CCA 90 bp GGTAGAGGTAGCCAGCCAGTGGCCCGTGGGCACCGGGCACGGCCATaGGCAGTGCTGGGGCCCCAAAGTCGCCCAGTGGCCCAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: GRGSQPVARGHRARP*AVLGPQSRPVAQQV
Trigger: CACCTGCTGGGCCACTGGGCGACTTTGGGGCCCCAGCACTGCCCATGGCCGTGCCCGGTGCCCACGGGCCACTGGCTGGCTACCTCTACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS CCA 90 bp TTCTGCACAGGAGGCCGAAGGCCGCCGGCTGGTCGGGGCGGCTTTTaGTGGGCTCCTGCAGGCAGCCCAAGATGCGGGCCCGCACCTGGT +
Preference number: 5 (lower is better)
Translates to: FCTGGRRPPAGRGGF*WAPAGSPRCGPAPG
Trigger: ACCAGGTGCGGGCCCGCATCTTGGGCTGCCTGCAGGAGCCCACCAAAAGCCGCCCCGACCAGCCGGCGGCCTTCGGCCTCCTGTGCAGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373587.3
ENST00000373588.9
ENST00000620110.4
CDS GCA 90 bp GCAAGCAGCTGCAGCACCAGCTCCTGCGCCCGCAACACCAGGCTGTaGAGCAGCGAGCCCGCCTGGGTGGCCACTGTGGTCAGCTCCACC +
Preference number: 5 (lower is better)
Translates to: ASSCSTSSCARNTRL*SSEPAWVATVVSST
Trigger: GGTGGAGCTGACCACAGTGGCCACCCAGGCGGGCTCGCTGCTGCACAGCCTGGTGTTGCGGGCGCAGGAGCTGGTGCTGCAGCTGCTTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373587.3
ENST00000373588.9
ENST00000620110.4
CDS GCA 90 bp CCCGCGGCGTCCGCCTCTAGGCTCAGACCCACACAGCCTGGTGGATaGCTGGCCAGAGACAGCGGGACACCAGCGGACCTCCATGGGGCT +
Preference number: 5 (lower is better)
Translates to: PAASASRLRPTQPGG*LARDSGTPADLHGA
Trigger: AGCCCCATGGAGGTCCGCTGGTGTCCCGCTGTCTCTGGCCAGGCATCCACCAGGCTGTGTGGGTCTGAGCCTAGAGGCGGACGCCGCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455734.1
CDS-3UTR CAA 90 bp GGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCCACCTCCGCCAGGCCCTGGTCGGGGCGGCTTTaGGTGGGCTCCTGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: GHSKQQASASGHSTSARPWSGRL*VGSCRQ
Trigger: CTGCCTGCAGGAGCCCACCAAAAGCCGCCCCGACCA...GGGCCTGGCGGAGGTGGAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS GCA 90 bp CAGCCCAAGATGCGGGCCCGCACCTGGTCCTCATCCGGCTCCAGCTaGAGCAGCTGCAGGATGAGCTCAGGCACGTTGGGCCCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: QPKMRARTWSSSGSS*SSCRMSSGTLGPPE
Trigger: CTCTGGAGGGCCCAACGTGCCTGAGCTCATCCTGCAGCTGCTGCAGCTGGAGCCGGATGAGGACCAGGTGCGGGCCCGCATCTTGGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS CCA 90 bp AAGGTCTGGTCGGCCATTCTGCACAGGAGGCCGAAGGCCGCCGGCTaGTCGGGGCGGCTTTTGGTGGGCTCCTGCAGGCAGCCCAAGATG +
Preference number: 5 (lower is better)
Translates to: KVWSAILHRRPKAAG*SGRLLVGSCRQPKM
Trigger: CATCTTGGGCTGCCTGCAGGAGCCCACCAAAAGCCGCCCCGACCAGCCGGCGGCCTTCGGCCTCCTGTGCAGAATGGCCGACCAGACCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373587.3
ENST00000373588.9
ENST00000620110.4
CDS CCA 90 bp CCTGGCTCCTCCCATCGGCAGCCCAGGGAAGAAGAGGGGGTAGCATaGTGGGAGGGTGAGTCTGGGAGACCCCTGGCACCTTCCCTGCCC +
Preference number: 5 (lower is better)
Translates to: PGSSHRQPREEEGVA*WEGESGRPLAPSLP
Trigger: GGGCAGGGAAGGTGCCAGGGGTCTCCCAGACTCACCCTCCCACCATGCTACCCCCTCTTCTTCCCTGGGCTGCCGATGGGAGGAGCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455734.1
CDS CCA 90 bp CGGCGTCCGCCTCTAGGCTCAGACCCACACAGCCTGGTGGATGCCTaGCCAGAGACAGCGGGACACCAGCGGACCTCCATGGGGCTTGTG +
Preference number: 5 (lower is better)
Translates to: RRPPLGSDPHSLVDA*PETAGHQRTSMGLV
Trigger: CACAAGCCCCATGGAGGTCCGCTGGTGTCCCGCTGTCTCTGGCCAGGCATCCACCAGGCTGTGTGGGTCTGAGCCTAGAGGCGGACGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455734.1
CDS CCA 90 bp CAGCGGGACACCAGCGGACCTCCATGGGGCTTGTGGTCACAGGCCTaGCTCCTCCCATCGGCAGCCCAGGGAAGAAGAGGGGGTAGCATG +
Preference number: 5 (lower is better)
Translates to: QRDTSGPPWGLWSQA*LLPSAAQGRRGGSM
Trigger: CATGCTACCCCCTCTTCTTCCCTGGGCTGCCGATGGGAGGAGCCAGGCCTGTGACCACAAGCCCCATGGAGGTCCGCTGGTGTCCCGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455734.1
CDS CCA 90 bp CCTGGCCAGAGACAGCGGGACACCAGCGGACCTCCATGGGGCTTGTaGTCACAGGCCTGGCTCCTCCCATCGGCAGCCCAGGGAAGAAGA +
Preference number: 5 (lower is better)
Translates to: PGQRQRDTSGPPWGL*SQAWLLPSAAQGRR
Trigger: TCTTCTTCCCTGGGCTGCCGATGGGAGGAGCCAGGCCTGTGACCACAAGCCCCATGGAGGTCCGCTGGTGTCCCGCTGTCTCTGGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455734.1
CDS-3UTR CAA 90 bp CCAAGGGACGTCGAGGCCCACCAGGGAATCCCGAACCTCCTCCCCGGACCTGCACAGCGCTTCTCTGGATaGGGGCTGGGGCTCAGAAGT +
Preference number: 5 (lower is better)
Translates to: PRDVEAHQGIPNLLPGPAQRFSG*GLGLRS
Trigger: ACTTCTGAGCCCCAGCCCCAATCCAGAGAAGCGCTG...TGCAGGTCCGGGGAGGAGGTTCGGGATTCCCTGGTGGGCCTCGACGTCCCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp GGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCCACCTCCGCCAGGCCCTCCACCTCCAGCTCCTaGAAGACCATGCACCTGCGT +
Preference number: 5 (lower is better)
Translates to: GHSKQQASASGHSTSARPSTSSS*KTMHLR
Trigger: ACGCAGGTGCATGGTCTTCAAGGAGCTGGAGGTGGA...GGGCCTGGCGGAGGTGGAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620110.4
CDS GCA 90 bp GGCATCTCGTTGCCCAGGTGCTTGTGGTACAGGTACTCCTTGGCCTaGATGCTCAGGGCCCGCACCTCCACCAGGCACAGCAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: GISLPRCLWYRYSLA*MLRARTSTRHSSSC
Trigger: GCAGCTGCTGCTGTGCCTGGTGGAGGTGCGGGCCCTGAGCATGCAGGCCAAGGAGTACCTGTACCACAAGCACCTGGGCAACGAGATGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373587.3
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp CCAAGGGACGTCGAGGCCCACCAGGGAATCCCGAACCTCCTCCCCGGACCTGCATACATCGGCCCAAACTaGTTCCGGCCACCCCTCATA +
Preference number: 5 (lower is better)
Translates to: PRDVEAHQGIPNLLPGPAYIGPN*FRPPLI
Trigger: TATGAGGGGTGGCCGGAACAAGTTTGGGCCGATGTA...TGCAGGTCCGGGGAGGAGGTTCGGGATTCCCTGGTGGGCCTCGACGTCCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp CCAAGGGACGTCGAGGCCCACCAGGGAATCCCGAACCTCCTCCCCGGACCTGCATATCAATGCCCCCTCTaGCAGAGGTCAGGTGGGGTA +
Preference number: 5 (lower is better)
Translates to: PRDVEAHQGIPNLLPGPAYQCPL*QRSGGV
Trigger: TACCCCACCTGACCTCTGCAAGAGGGGGCATTGATA...TGCAGGTCCGGGGAGGAGGTTCGGGATTCCCTGGTGGGCCTCGACGTCCCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp GAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTACCAAACGTTCTCCTTGAGGATGCTGCCCTCCTaGCCGTGCTGGACCTGGCGG +
Preference number: 5 (lower is better)
Translates to: EGHLWVGLGCRLYQTFSLRMLPS*PCWTWR
Trigger: CCGCCAGGTCCAGCACGGCAAGGAGGGCAGCATCCT...CAAGGAGAACGTTTGGTACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373588.9
CDS-3UTR CAA 90 bp GAGAGGGGATCAACAGCGCTATCCCTGATCTACAGGCCCGTGCCCCCTCCCAAGTCGATGAGCAGGTTGTaGCGGGGCATCTCGTTGCCC +
Preference number: 5 (lower is better)
Translates to: ERGSTALSLIYRPVPPPKSMSRL*RGISLP
Trigger: GGGCAACGAGATGCCCCGCAACAACCTGCTCATCGA...CTTGGGAGGGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTGATCCCCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp CCAAGGGACGTCGAGGCCCACCAGGGAATCCCGAACCTCCTCCCCGGACCTGCAATTTCGATGAGCAGGTaGTTGCGGGGCATCTCGTTG +
Preference number: 5 (lower is better)
Translates to: PRDVEAHQGIPNLLPGPAISMSR*LRGISL
Trigger: CAACGAGATGCCCCGCAACAACCTGCTCATCGAAAT...TGCAGGTCCGGGGAGGAGGTTCGGGATTCCCTGGTGGGCCTCGACGTCCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp AACAGCCACCTCCTTGGGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCCAGAAGGGACAGCGCTaGCGCTGCGTCTTGTCGATC +
Preference number: 5 (lower is better)
Translates to: NSHLLGALQAAGKCQWPLQKGQR*RCVLSI
Trigger: GATCGACAAGACGCAGCGCAAGCGCTGTCCCTTCTG...GAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCCCAAGGAGGTGGCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp CCAAGGGACGTCGAGGCCCACCAGGGAATCCCGAACCTCCTCCCCGGACCTGCATACCAAACGTTCTCCTaGGGTGGGAGAGGGAATCAG +
Preference number: 5 (lower is better)
Translates to: PRDVEAHQGIPNLLPGPAYQTFS*GGRGNQ
Trigger: CTGATTCCCTCTCCCACCCAAGGAGAACGTTTGGTA...TGCAGGTCCGGGGAGGAGGTTCGGGATTCCCTGGTGGGCCTCGACGTCCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp GCCACAGAGAGGGGATCAACAGCGCTATCCCTGATCTACAGGCCCGTGCCCCCTCAGCGCTTCTCTGGATaGGGGCTGGGGCTCAGAAGT +
Preference number: 5 (lower is better)
Translates to: ATERGSTALSLIYRPVPPQRFSG*GLGLRS
Trigger: ACTTCTGAGCCCCAGCCCCAATCCAGAGAAGCGCTG...AGGGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTGATCCCCTCTCTGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp GAGAGGGGATCAACAGCGCTATCCCTGATCTACAGGCCCGTGCCCCCTCCCAAGAAGGGACCCAACGGGTaGGAGCCACAGAGAGGGGAT +
Preference number: 5 (lower is better)
Translates to: ERGSTALSLIYRPVPPPKKGPNG*EPQRGD
Trigger: ATCCCCTCTCTGTGGCTCCAACCCGTTGGGTCCCTT...CTTGGGAGGGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTGATCCCCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp AACAGCCACCTCCTTGGGGCACTCCAAGCAGCAGGCAAGTGCCAGTGGCCACTCGCCAGCTTCATGGGTTaGCAGCAAGGGACCCAACGG +
Preference number: 5 (lower is better)
Translates to: NSHLLGALQAAGKCQWPLASFMG*QQGTQR
Trigger: CCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGGC...GAGTGGCCACTGGCACTTGCCTGCTGCTTGGAGTGCCCCAAGGAGGTGGCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp GCCACAGAGAGGGGATCAACAGCGCTATCCCTGATCTACAGGCCCGTGCCCCCTTGTGGGTCTCCGGCCTaGGCAGGGGCACATGTTTCA +
Preference number: 5 (lower is better)
Translates to: ATERGSTALSLIYRPVPPCGSPA*AGAHVS
Trigger: TGAAACATGTGCCCCTGCCAAGGCCGGAGACCCACA...AGGGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTGATCCCCTCTCTGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS GCA 90 bp AAGAGGATGATGAACTTGAGGCAGACAAACTCCTGCCGGTCCAGCTaGAGCGCAAGCAGCTGCAGCACCAGCTCCTGCGCCCGCAACACC +
Preference number: 5 (lower is better)
Translates to: KRMMNLRQTNSCRSS*SASSCSTSSCARNT
Trigger: GGTGTTGCGGGCGCAGGAGCTGGTGCTGCAGCTGCTTGCGCTGCAGCTGGACCGGCAGGAGTTTGTCTGCCTCAAGTTCATCATCCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373587.3
ENST00000373588.9
ENST00000620110.4
CDS GCA 90 bp CATCGGGGGCCCTGTCTCCAGCTTGAAGCCATTGGCCCGAATCTGTaGCTTCTTCTGCTGTTTCAGGGCCCGGTCCCGCTTGTACATCGG +
Preference number: 5 (lower is better)
Translates to: HRGPCLQLEAIGPNL*LLLLFQGPVPLVHR
Trigger: CCGATGTACAAGCGGGACCGGGCCCTGAAACAGCAGAAGAAGGCACAGATTCGGGCCAATGGCTTCAAGCTGGAGACAGGGCCCCCGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373588.9
ENST00000455734.1
ENST00000620110.4
CDS-3UTR CAA 90 bp GACCTAGGACAGGGGGTCAGGGAGCTGAGGGCCAGCTTCATGGGTTTGCAGCAAGCCACCTCCAGCTCCTaGAAGACCATGCACCTGCGT +
Preference number: 5 (lower is better)
Translates to: DLGQGVRELRASFMGLQQATSSS*KTMHLR
Trigger: ACGCAGGTGCATGGTCTTCAAGGAGCTGGAGGTGGC...TTGCTGCAAACCCATGAAGCTGGCCCTCAGCTCCCTGACCCCCTGTCCTAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373588.9
CDS-3UTR CAA 90 bp GCCACAGAGAGGGGATCAACAGCGCTATCCCTGATCTACAGGCCCGTGCCCCCTTGCGTCTTGTCGATCTaGCAGCTCTGGCTCTCGGTG +
Preference number: 5 (lower is better)
Translates to: ATERGSTALSLIYRPVPPCVLSI*QLWLSV
Trigger: CACCGAGAGCCAGAGCTGCAAGATCGACAAGACGCA...AGGGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTGATCCCCTCTCTGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp GGCGAGTGTCCGGGGAGAAACCGTCAGCTGTACTTAGTGGCAATCCCCAAGCCCCGCTTGCGCTGCGTCTaGTCGATCTTGCAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: GECPGRNRQLYLVAIPKPRLRCV*SILQLW
Trigger: CCAGAGCTGCAAGATCGACAAGACGCAGCGCAAGCG...GGGCTTGGGGATTGCCACTAAGTACAGCTGACGGTTTCTCCCCGGACACTCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp GGGCCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACAGAGACAGAAGGGACAGCGCTaGCGCTGCGTCTTGTCGATC +
Preference number: 5 (lower is better)
Translates to: GPASWVCSKGPNGLEPQRQKGQR*RCVLSI
Trigger: GATCGACAAGACGCAGCGCAAGCGCTGTCCCTTCTG...TCTCTGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp GGGCCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACAGAGAGGCCCTGTCTCCAGCTaGAAGCCATTGGCCCGAATC +
Preference number: 5 (lower is better)
Translates to: GPASWVCSKGPNGLEPQRGPVSS*KPLARI
Trigger: GATTCGGGCCAATGGCTTCAAGCTGGAGACAGGGCC...TCTCTGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp GGCGAGTGTCCGGGGAGAAACCGTCAGCTGTACTTAGTGGCAATCCCCAAGCCCGGCCCTGTCTCCAGCTaGAAGCCATTGGCCCGAATC +
Preference number: 5 (lower is better)
Translates to: GECPGRNRQLYLVAIPKPGPVSS*KPLARI
Trigger: GATTCGGGCCAATGGCTTCAAGCTGGAGACAGGGCC...GGGCTTGGGGATTGCCACTAAGTACAGCTGACGGTTTCTCCCCGGACACTCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp GGGATGACCTCTGATCCAAGGGACGTCGAGGCCCACCAGGGAATCCCGAACCTCTTAACAGCCACCTCCTaGGGGCACTCCAAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: GMTSDPRDVEAHQGIPNLLTATS*GHSKQQ
Trigger: CTGCTGCTTGGAGTGCCCCAAGGAGGTGGCTGTTAA...GAGGTTCGGGATTCCCTGGTGGGCCTCGACGTCCCTTGGATCAGAGGTCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp CCAGGGAATCCCGAACCTCCTCCCCGGACCTGCAGGCTTCAGACTCCAGGAGAGCCCTCCCAAGTTCACTaGCATTCCCACCCACAGAGA +
Preference number: 5 (lower is better)
Translates to: PGNPEPPPRTCRLQTPGEPSQVH*HSHPQR
Trigger: TCTCTGTGGGTGGGAATGCAAGTGAACTTGGGAGGG...CTCTCCTGGAGTCTGAAGCCTGCAGGTCCGGGGAGGAGGTTCGGGATTCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp GGCGAGTGTCCGGGGAGAAACCGTCAGCTGTACTTAGTGGCAATCCCCAAGCCCAAGGGACCCAACGGGTaGGAGCCACAGAGAGGGGAT +
Preference number: 5 (lower is better)
Translates to: GECPGRNRQLYLVAIPKPKGPNG*EPQRGD
Trigger: ATCCCCTCTCTGTGGCTCCAACCCGTTGGGTCCCTT...GGGCTTGGGGATTGCCACTAAGTACAGCTGACGGTTTCTCCCCGGACACTCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS GCA 90 bp CATCTGGTCGGCCACCTCCAGCTCCTTGAAGACCATGCACCTGCGTaGCCAGTCCACGATGGAGATGAAGGTCTGGTCGGCCATTCTGCA +
Preference number: 5 (lower is better)
Translates to: HLVGHLQLLEDHAPA*PVHDGDEGLVGHSA
Trigger: TGCAGAATGGCCGACCAGACCTTCATCTCCATCGTGGACTGGGCACGCAGGTGCATGGTCTTCAAGGAGCTGGAGGTGGCCGACCAGATG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373587.3
ENST00000373588.9
CDS GCA 90 bp AGCATTTCGATGAGCAGGTTGTTGCGGGGCATCTCGTTGCCCAGGTaGTTGTGGTACAGGTACTCCTTGGCCTGCATGCTCAGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: SISMSRLLRGISLPR*LWYRYSLACMLRAR
Trigger: GCGGGCCCTGAGCATGCAGGCCAAGGAGTACCTGTACCACAAGCACCTGGGCAACGAGATGCCCCGCAACAACCTGCTCATCGAAATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373587.3
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp AGAAACCGTCAGCTGTACTTAGTGGCAATCCCCAAGCCCCAGCTTCAGTCCTCATGGTCGGGGCGGCTTTaGGTGGGCTCCTGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: RNRQLYLVAIPKPQLQSSWSGRL*VGSCRQ
Trigger: CTGCCTGCAGGAGCCCACCAAAAGCCGCCCCGACCA...TGAGGACTGAAGCTGGGGCTTGGGGATTGCCACTAAGTACAGCTGACGGTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp AATACCAGCCTGGGAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTACCATCGATGAGCAGGTTGTaGCGGGGCATCTCGTTGCCC +
Preference number: 5 (lower is better)
Translates to: NTSLGGPPLGGARMSIVPSMSRL*RGISLP
Trigger: GGGCAACGAGATGCCCCGCAACAACCTGCTCATCGA...TGGTACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTCCCAGGCTGGTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp GGGATGACCTCTGATCCAAGGGACGTCGAGGCCCACCAGGGAATCCCGAACCTCTACATCGGCCCAAACTaGTTCCGGCCACCCCTCATA +
Preference number: 5 (lower is better)
Translates to: GMTSDPRDVEAHQGIPNLYIGPN*FRPPLI
Trigger: TATGAGGGGTGGCCGGAACAAGTTTGGGCCGATGTA...GAGGTTCGGGATTCCCTGGTGGGCCTCGACGTCCCTTGGATCAGAGGTCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp GACCTAGGACAGGGGGTCAGGGAGCTGAGGGCCAGCTTCATGGGTTTGCAGCAATTAACAGCCACCTCCTaGGGGCACTCCAAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: DLGQGVRELRASFMGLQQLTATS*GHSKQQ
Trigger: CTGCTGCTTGGAGTGCCCCAAGGAGGTGGCTGTTAA...TTGCTGCAAACCCATGAAGCTGGCCCTCAGCTCCCTGACCCCCTGTCCTAGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp GGGCCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACAGAGATCGTTGCCCAGGTGCTaGTGGTACAGGTACTCCTTG +
Preference number: 5 (lower is better)
Translates to: GPASWVCSKGPNGLEPQRSLPRC*WYRYSL
Trigger: CAAGGAGTACCTGTACCACAAGCACCTGGGCAACGA...TCTCTGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp CTGAGGGCCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACATCGTTGCCCAGGTGCTaGTGGTACAGGTACTCCTTG +
Preference number: 5 (lower is better)
Translates to: LRASFMGLQQGTQRVGATSLPRC*WYRYSL
Trigger: CAAGGAGTACCTGTACCACAAGCACCTGGGCAACGA...TGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGGCCCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp ATTTATTCCAGGGCTGTGGGGGCTGGGGTGATCCTTAAGGGCACTTCTCGTTTCTTGCGGGGCATCTCGTaGCCCAGGTGCTTGTGGTAC +
Preference number: 5 (lower is better)
Translates to: IYSRAVGAGVILKGTSRFLRGIS*PRCLWY
Trigger: GTACCACAAGCACCTGGGCAACGAGATGCCCCGCAA...GAAACGAGAAGTGCCCTTAAGGATCACCCCAGCCCCCACAGCCCTGGAATAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp AATACCAGCCTGGGAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTACCAATTTCGATGAGCAGGTaGTTGCGGGGCATCTCGTTG +
Preference number: 5 (lower is better)
Translates to: NTSLGGPPLGGARMSIVPISMSR*LRGISL
Trigger: CAACGAGATGCCCCGCAACAACCTGCTCATCGAAAT...TGGTACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTCCCAGGCTGGTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp GGGCCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACAGAGATCAAGTCTGCTTGGCTaGCAGCATTTCGATGAGCAG +
Preference number: 5 (lower is better)
Translates to: GPASWVCSKGPNGLEPQRSSLLG*QHFDEQ
Trigger: CTGCTCATCGAAATGCTGCAAGCCAAGCAGACTTGA...TCTCTGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp ATAAATACCAGCCTGGGAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTATGCGTCTTGTCGATCTaGCAGCTCTGGCTCTCGGTG +
Preference number: 5 (lower is better)
Translates to: INTSLGGPPLGGARMSIVCVLSI*QLWLSV
Trigger: CACCGAGAGCCAGAGCTGCAAGATCGACAAGACGCA...TACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTCCCAGGCTGGTATTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp TGGTGCTTCACCCTGCAGAGTGTCCTTCATGACCTAGGACAGGGGGTCAGGGAGTACCAAACGTTCTCCTaGGGTGGGAGAGGGAATCAG +
Preference number: 5 (lower is better)
Translates to: WCFTLQSVLHDLGQGVREYQTFS*GGRGNQ
Trigger: CTGATTCCCTCTCCCACCCAAGGAGAACGTTTGGTA...CTCCCTGACCCCCTGTCCTAGGTCATGAAGGACACTCTGCAGGGTGAAGCACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp ATTTATTCCAGGGCTGTGGGGGCTGGGGTGATCCTTAAGGGCACTTCTCGTTTCGCCAGCTTCATGGGTTaGCAGCAAGGGACCCAACGG +
Preference number: 5 (lower is better)
Translates to: IYSRAVGAGVILKGTSRFASFMG*QQGTQR
Trigger: CCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGGC...GAAACGAGAAGTGCCCTTAAGGATCACCCCAGCCCCCACAGCCCTGGAATAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp AATACCAGCCTGGGAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTACCATCAAGTCTGCTTGGCTaGCAGCATTTCGATGAGCAG +
Preference number: 5 (lower is better)
Translates to: NTSLGGPPLGGARMSIVPSSLLG*QHFDEQ
Trigger: CTGCTCATCGAAATGCTGCAAGCCAAGCAGACTTGA...TGGTACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTCCCAGGCTGGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp CTTAGTAGGCGAGTGTCCGGGGAGAAACCGTCAGCTGTACTTAGTGGCAATCCCTATCAATGCCCCCTCTaGCAGAGGTCAGGTGGGGTA +
Preference number: 5 (lower is better)
Translates to: LSRRVSGEKPSAVLSGNPYQCPL*QRSGGV
Trigger: TACCCCACCTGACCTCTGCAAGAGGGGGCATTGATA...GGGATTGCCACTAAGTACAGCTGACGGTTTCTCCCCGGACACTCGCCTACTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp GCCACAGAGAGGGGATCAACAGCGCTATCCCTGATCTACAGGCCCGTGCCCCCTGGGGAGAAAAACCTCTaGACTACAACCTTGCAGATA +
Preference number: 5 (lower is better)
Translates to: ATERGSTALSLIYRPVPPGEKNL*TTTLQI
Trigger: TATCTGCAAGGTTGTAGTCAAGAGGTTTTTCTCCCC...AGGGGGCACGGGCCTGTAGATCAGGGATAGCGCTGTTGATCCCCTCTCTGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp ATTTATTCCAGGGCTGTGGGGGCTGGGGTGATCCTTAAGGGCACTTCTCGTTTCTCCAGCTTGAAGCCATaGGCCCGAATCTGTGCCTTC +
Preference number: 5 (lower is better)
Translates to: IYSRAVGAGVILKGTSRFSSLKP*ARICAF
Trigger: GAAGGCACAGATTCGGGCCAATGGCTTCAAGCTGGA...GAAACGAGAAGTGCCCTTAAGGATCACCCCAGCCCCCACAGCCCTGGAATAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp GAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTACCAAACGTTCTCCTTGGGGCTAGGATGTCGATaGTACCAAACGTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: EGHLWVGLGCRLYQTFSLGLGCR*YQTFSL
Trigger: CAAGGAGAACGTTTGGTACAATCGACATCCTAGCCC...CAAGGAGAACGTTTGGTACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp GGGCCAGCTTCATGGGTTTGCAGCAAGGGACCCAACGGGTTGGAGCCACAGAGAGGGGAGAAAAACCTCTaGACTACAACCTTGCAGATA +
Preference number: 5 (lower is better)
Translates to: GPASWVCSKGPNGLEPQRGEKNL*TTTLQI
Trigger: TATCTGCAAGGTTGTAGTCAAGAGGTTTTTCTCCCC...TCTCTGTGGCTCCAACCCGTTGGGTCCCTTGCTGCAAACCCATGAAGCTGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp ATTTATTCCAGGGCTGTGGGGGCTGGGGTGATCCTTAAGGGCACTTCTCGTTTCCAGGCTCAAGTCTGCTaGGCTTGCAGCATTTCGATG +
Preference number: 5 (lower is better)
Translates to: IYSRAVGAGVILKGTSRFQAQVC*ACSISM
Trigger: CATCGAAATGCTGCAAGCCAAGCAGACTTGAGCCTG...GAAACGAGAAGTGCCCTTAAGGATCACCCCAGCCCCCACAGCCCTGGAATAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp AAACGTTCTCCTTGGGTGGGAGAGGGAATCAGTGATGCCTGGAGCAAAGTTTTTCGCTTGCGCTGCGTCTaGTCGATCTTGCAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: KRSPWVGEGISDAWSKVFRLRCV*SILQLW
Trigger: CCAGAGCTGCAAGATCGACAAGACGCAGCGCAAGCG...AAAAACTTTGCTCCAGGCATCACTGATTCCCTCTCCCACCCAAGGAGAACGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp CTTAGTAGGCGAGTGTCCGGGGAGAAACCGTCAGCTGTACTTAGTGGCAATCCCGGGCTAGGATGTCGATaGTACCAAACGTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: LSRRVSGEKPSAVLSGNPGLGCR*YQTFSL
Trigger: CAAGGAGAACGTTTGGTACAATCGACATCCTAGCCC...GGGATTGCCACTAAGTACAGCTGACGGTTTCTCCCCGGACACTCGCCTACTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp AAACGTTCTCCTTGGGTGGGAGAGGGAATCAGTGATGCCTGGAGCAAAGTTTTTTGTGGGTCTCCGGCCTaGGCAGGGGCACATGTTTCA +
Preference number: 5 (lower is better)
Translates to: KRSPWVGEGISDAWSKVFCGSPA*AGAHVS
Trigger: TGAAACATGTGCCCCTGCCAAGGCCGGAGACCCACA...AAAAACTTTGCTCCAGGCATCACTGATTCCCTCTCCCACCCAAGGAGAACGTTT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp GAGGGCCACCTCTGGGTGGGGCTAGGATGTCGATTGTACCAAACGTTCTCCTTGCTCTTGACTACAACCTaGCAGATAAATACCAGCCTG +
Preference number: 5 (lower is better)
Translates to: EGHLWVGLGCRLYQTFSLLLTTT*QINTSL
Trigger: CAGGCTGGTATTTATCTGCAAGGTTGTAGTCAAGAG...CAAGGAGAACGTTTGGTACAATCGACATCCTAGCCCCACCCAGAGGTGGCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp CAAACTCGGTTATCCTTAGTTTACAAAACAGAGGCTCTCCCTCCTGGTCTCTATTGGTACAGGTACTCCTaGGCCTGCATGCTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: QTRLSLVYKTEALPPGLYWYRYS*ACMLRA
Trigger: GGCCCTGAGCATGCAGGCCAAGGAGTACCTGTACCA...ATAGAGACCAGGAGGGAGAGCCTCTGTTTTGTAAACTAAGGATAACCGAGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp AAACGTTCTCCTTGGGTGGGAGAGGGAATCAGTGATGCCTGGAGCAAAGTTTTTCCCTCCCAAGTTCACTaGCATTCCCACCCACAGAGA +
Preference number: 5 (lower is better)
Translates to: KRSPWVGEGISDAWSKVFPSQVH*HSHPQR
Trigger: TCTCTGTGGGTGGGAATGCAAGTGAACTTGGGAGGG...AAAAACTTTGCTCCAGGCATCACTGATTCCCTCTCCCACCCAAGGAGAACGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS-3UTR CAA 90 bp ATTTATTCCAGGGCTGTGGGGGCTGGGGTGATCCTTAAGGGCACTTCTCGTTTCCTCTTGACTACAACCTaGCAGATAAATACCAGCCTG +
Preference number: 5 (lower is better)
Translates to: IYSRAVGAGVILKGTSRFLLTTT*QINTSL
Trigger: CAGGCTGGTATTTATCTGCAAGGTTGTAGTCAAGAG...GAAACGAGAAGTGCCCTTAAGGATCACCCCAGCCCCCACAGCCCTGGAATAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS GCA 72 bp GCCGCCGGCTGGTCGGGGCGGCTTTTGGTGGGCTCCTaGAGGCAGCCCAAGATGCGGGCCCGCACCTGGTCC +
Preference number: 6 (lower is better)
Translates to: AAGWSGRLLVGS*RQPKMRARTWS
Trigger: GGACCAGGTGCGGGCCCGCATCTTGGGCTGCCTGCAGGAGCCCACCAAAAGCCGCCCCGACCAGCCGGCGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373587.3
ENST00000373588.9
ENST00000620110.4
CDS CCA 72 bp GGCCGAAGGCCGCCGGCTGGTCGGGGCGGCTTTTGGTaGGCTCCTGCAGGCAGCCCAAGATGCGGGCCCGCA +
Preference number: 6 (lower is better)
Translates to: GRRPPAGRGGFW*APAGSPRCGPA
Trigger: TGCGGGCCCGCATCTTGGGCTGCCTGCAGGAGCCCACCAAAAGCCGCCCCGACCAGCCGGCGGCCTTCGGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373587.3
ENST00000373588.9
ENST00000620110.4
CDS CCA 72 bp GGAGGCCGAAGGCCGCCGGCTGGTCGGGGCGGCTTTTaGTGGGCTCCTGCAGGCAGCCCAAGATGCGGGCCC +
Preference number: 6 (lower is better)
Translates to: GGRRPPAGRGGF*WAPAGSPRCGP
Trigger: GGGCCCGCATCTTGGGCTGCCTGCAGGAGCCCACCAAAAGCCGCCCCGACCAGCCGGCGGCCTTCGGCCTCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373587.3
ENST00000373588.9
ENST00000620110.4
CDS CCA 72 bp AGCCAGCCAGTGGCCCGTGGGCACCGGGCACGGCCATaGGCAGTGCTGGGGCCCCAAAGTCGCCCAGTGGCC +
Preference number: 6 (lower is better)
Translates to: SQPVARGHRARP*AVLGPQSRPVA
Trigger: GGCCACTGGGCGACTTTGGGGCCCCAGCACTGCCCATGGCCGTGCCCGGTGCCCACGGGCCACTGGCTGGCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS GCA 72 bp CTCCGGCAGCCCAGGTGGGACGGTGGCGACTGTGGGTaGGCAGAAACCCCCTCACACCACGGCGGGCGGCAG +
Preference number: 6 (lower is better)
Translates to: LRQPRWDGGDCG*AETPSHHGGRQ
Trigger: CTGCCGCCCGCCGTGGTGTGAGGGGGTTTCTGCGCACCCACAGTCGCCACCGTCCCACCTGGGCTGCCGGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS CCA 72 bp GAGGCTCCGGCAGCCCAGGTGGGACGGTGGCGACTGTaGGTGCGCAGAAACCCCCTCACACCACGGCGGGCG +
Preference number: 6 (lower is better)
Translates to: EAPAAQVGRWRL*VRRNPLTPRRA
Trigger: CGCCCGCCGTGGTGTGAGGGGGTTTCTGCGCACCCACAGTCGCCACCGTCCCACCTGGGCTGCCGGAGCCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS CCA 72 bp TGCTGGGGCCCCAAAGTCGCCCAGTGGCCCAGCAGGTaGACCGGCGGCCAGGCCCTTGGGCTCAGGCCCATG +
Preference number: 6 (lower is better)
Translates to: CWGPKVAQWPSR*TGGQALGLRPM
Trigger: CATGGGCCTGAGCCCAAGGGCCTGGCCGCCGGTCCACCTGCTGGGCCACTGGGCGACTTTGGGGCCCCAGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373588.9
ENST00000455734.1
ENST00000620110.4
CDS CAA 72 bp AGGAGGCCGAAGGCCGCCGGCTGGTCGGGGCGGCTTTaGGTGGGCTCCTGCAGGCAGCCCAAGATGCGGGCC +
Preference number: 6 (lower is better)
Translates to: RRPKAAGWSGRL*VGSCRQPKMRA
Trigger: GGCCCGCATCTTGGGCTGCCTGCAGGAGCCCACCAAAAGCCGCCCCGACCAGCCGGCGGCCTTCGGCCTCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373587.3
ENST00000373588.9
ENST00000620110.4
CDS GCA 72 bp TGCAGCACCAGCTCCTGCGCCCGCAACACCAGGCTGTaGAGCAGCGAGCCCGCCTGGGTGGCCACTGTGGTC +
Preference number: 6 (lower is better)
Translates to: CSTSSCARNTRL*SSEPAWVATVV
Trigger: GACCACAGTGGCCACCCAGGCGGGCTCGCTGCTGCACAGCCTGGTGTTGCGGGCGCAGGAGCTGGTGCTGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373587.3
ENST00000373588.9
ENST00000620110.4
CDS CCA 72 bp TCGGCCATTCTGCACAGGAGGCCGAAGGCCGCCGGCTaGTCGGGGCGGCTTTTGGTGGGCTCCTGCAGGCAG +
Preference number: 6 (lower is better)
Translates to: SAILHRRPKAAG*SGRLLVGSCRQ
Trigger: CTGCCTGCAGGAGCCCACCAAAAGCCGCCCCGACCAGCCGGCGGCCTTCGGCCTCCTGTGCAGAATGGCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373587.3
ENST00000373588.9
ENST00000620110.4
CDS CCA 72 bp GTCCAGGGGGAGGCTCCGGCAGCCCAGGTGGGACGGTaGCGACTGTGGGTGCGCAGAAACCCCCTCACACCA +
Preference number: 6 (lower is better)
Translates to: VQGEAPAAQVGR*RLWVRRNPLTP
Trigger: TGGTGTGAGGGGGTTTCTGCGCACCCACAGTCGCCACCGTCCCACCTGGGCTGCCGGAGCCTCCCCCTGGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS CCA 72 bp ACGGCCAGGAAAGGCAGGGTAGAGGTAGCCAGCCAGTaGCCCGTGGGCACCGGGCACGGCCATGGGCAGTGC +
Preference number: 6 (lower is better)
Translates to: TARKGRVEVASQ*PVGTGHGHGQC
Trigger: GCACTGCCCATGGCCGTGCCCGGTGCCCACGGGCCACTGGCTGGCTACCTCTACCCTGCCTTTCCTGGCCGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS CCA 72 bp GGCTCCTGCAGGCAGCCCAAGATGCGGGCCCGCACCTaGTCCTCATCCGGCTCCAGCTGCAGCAGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: GSCRQPKMRART*SSSGSSCSSCR
Trigger: CCTGCAGCTGCTGCAGCTGGAGCCGGATGAGGACCAGGTGCGGGCCCGCATCTTGGGCTGCCTGCAGGAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS CCA 72 bp GGCTCCTGCAGGCAGCCCAAGATGCGGGCCCGCACCTaGTCCTCATCCGGCTCCAGCTGCAGCAGCTCCACT +
Preference number: 6 (lower is better)
Translates to: GSCRQPKMRART*SSSGSSCSSST
Trigger: AGTGGAGCTGCTGCAGCTGGAGCCGGATGAGGACCAGGTGCGGGCCCGCATCTTGGGCTGCCTGCAGGAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373587.3
CDS CCA 72 bp AGACAGCGGGACACCAGCGGACCTCCATGGGGCTTGTaGTCACAGGCCTGGCTCCTCCCATCGGCAGCCCAG +
Preference number: 6 (lower is better)
Translates to: RQRDTSGPPWGL*SQAWLLPSAAQ
Trigger: CTGGGCTGCCGATGGGAGGAGCCAGGCCTGTGACCACAAGCCCCATGGAGGTCCGCTGGTGTCCCGCTGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455734.1
CDS CAA 72 bp CAGAGACAGCGGGACACCAGCGGACCTCCATGGGGCTaGTGGTCACAGGCCTGGCTCCTCCCATCGGCAGCC +
Preference number: 6 (lower is better)
Translates to: QRQRDTSGPPWG*WSQAWLLPSAA
Trigger: GGCTGCCGATGGGAGGAGCCAGGCCTGTGACCACAAGCCCCATGGAGGTCCGCTGGTGTCCCGCTGTCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455734.1
CDS GCA 72 bp ACAAACTCCTGCCGGTCCAGCTGCAGCGCAAGCAGCTaGAGCACCAGCTCCTGCGCCCGCAACACCAGGCTG +
Preference number: 6 (lower is better)
Translates to: TNSCRSSCSASS*STSSCARNTRL
Trigger: CAGCCTGGTGTTGCGGGCGCAGGAGCTGGTGCTGCAGCTGCTTGCGCTGCAGCTGGACCGGCAGGAGTTTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373587.3
ENST00000373588.9
ENST00000620110.4
CDS GCA 72 bp TCCGCCTCTAGGCTCAGACCCACACAGCCTGGTGGATaGCTGGCCAGAGACAGCGGGACACCAGCGGACCTC +
Preference number: 6 (lower is better)
Translates to: SASRLRPTQPGG*LARDSGTPADL
Trigger: GAGGTCCGCTGGTGTCCCGCTGTCTCTGGCCAGGCATCCACCAGGCTGTGTGGGTCTGAGCCTAGAGGCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455734.1
CDS CCA 72 bp ACCAGCGGACCTCCATGGGGCTTGTGGTCACAGGCCTaGCTCCTCCCATCGGCAGCCCAGGGAAGAAGAGGG +
Preference number: 6 (lower is better)
Translates to: TSGPPWGLWSQA*LLPSAAQGRRG
Trigger: CCCTCTTCTTCCCTGGGCTGCCGATGGGAGGAGCCAGGCCTGTGACCACAAGCCCCATGGAGGTCCGCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455734.1
CDS GCA 72 bp ACAGCTCGTCCAGGTCCTCGTCGTACGAATAGTCCATaGCCGCGGCGTCCGCGAAGCGGAAGCAGCGCTCTC +
Preference number: 6 (lower is better)
Translates to: TARPGPRRTNSP*PRRPRSGSSAL
Trigger: GAGAGCGCTGCTTCCGCTTCGCGGACGCCGCGGGCATGGACTATTCGTACGACGAGGACCTGGACGAGCTGT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373588.9
ENST00000620110.4
CDS CAA 72 bp TTCAGGGCCCGGTCCCGCTTGTACATCGGCCCAAACTaGTTCCGGCCACCCCTCATACGGTCAGCGCGCACG +
Preference number: 6 (lower is better)
Translates to: FRARSRLYIGPN*FRPPLIRSART
Trigger: CGTGCGCGCTGACCGTATGAGGGGTGGCCGGAACAAGTTTGGGCCGATGTACAAGCGGGACCGGGCCCTGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373588.9
ENST00000455734.1
ENST00000620110.4
CDS GCA 72 bp ACAGCTCGTCCAGGTCCTCGTCGTACGAATAGTCCATaGCCGCGGCGTCCGCCTCTAGGCTCAGACCCACAC +
Preference number: 6 (lower is better)
Translates to: TARPGPRRTNSP*PRRPPLGSDPH
Trigger: GTGTGGGTCTGAGCCTAGAGGCGGACGCCGCGGGCATGGACTATTCGTACGACGAGGACCTGGACGAGCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455734.1
CDS CAA 90 bp TTCTGCTGTTTCAGGGCCCGGTCCCGCTTGTACATCGGCCCAAACTaGTTCCGGCCACCCCTCATACGGTCAGCGCGCACGGCTTCCAGG +
Preference number: 6 (lower is better)
Translates to: FCCFRARSRLYIGPN*FRPPLIRSARTASR
Trigger: CCTGGAAGCCGTGCGCGCTGACCGTATGAGGGGTGGCCGGAACAAGTTTGGGCCGATGTACAAGCGGGACCGGGCCCTGAAACAGCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373588.9
ENST00000455734.1
ENST00000620110.4
CDS GCA 72 bp GGCCACCTCCAGCTCCTTGAAGACCATGCACCTGCGTaGCCAGTCCACGATGGAGATGAAGGTCTGGTCGGC +
Preference number: 6 (lower is better)
Translates to: GHLQLLEDHAPA*PVHDGDEGLVG
Trigger: GCCGACCAGACCTTCATCTCCATCGTGGACTGGGCACGCAGGTGCATGGTCTTCAAGGAGCTGGAGGTGGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373587.3
ENST00000373588.9
CDS GCA 72 bp ATGAACTTGAGGCAGACAAACTCCTGCCGGTCCAGCTaGAGCGCAAGCAGCTGCAGCACCAGCTCCTGCGCC +
Preference number: 6 (lower is better)
Translates to: MNLRQTNSCRSS*SASSCSTSSCA
Trigger: GGCGCAGGAGCTGGTGCTGCAGCTGCTTGCGCTGCAGCTGGACCGGCAGGAGTTTGTCTGCCTCAAGTTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373587.3
ENST00000373588.9
ENST00000620110.4
CDS TCA 72 bp AGACCATGCACCTGCGTGCCCAGTCCACGATGGAGATaGAGGTCTGGTCGGCCATTCTGCACAGGAGGCCGA +
Preference number: 6 (lower is better)
Translates to: RPCTCVPSPRWR*RSGRPFCTGGR
Trigger: TCGGCCTCCTGTGCAGAATGGCCGACCAGACCTTCATCTCCATCGTGGACTGGGCACGCAGGTGCATGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373587.3
ENST00000373588.9
ENST00000620110.4
CDS GCA 72 bp CTCCACCTCCAGCTCCTTGAAGACCATGCACCTGCGTaGCCAGTCCACGATGGAGATGAAGGTCTGGTCGGC +
Preference number: 6 (lower is better)
Translates to: LHLQLLEDHAPA*PVHDGDEGLVG
Trigger: GCCGACCAGACCTTCATCTCCATCGTGGACTGGGCACGCAGGTGCATGGTCTTCAAGGAGCTGGAGGTGGAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620110.4
CDS CAA 90 bp ATTTCGATGAGCAGGTTGTTGCGGGGCATCTCGTTGCCCAGGTGCTaGTGGTACAGGTACTCCTTGGCCTGCATGCTCAGGGCCCGCACC +
Preference number: 6 (lower is better)
Translates to: ISMSRLLRGISLPRC*WYRYSLACMLRART
Trigger: GGTGCGGGCCCTGAGCATGCAGGCCAAGGAGTACCTGTACCACAAGCACCTGGGCAACGAGATGCCCCGCAACAACCTGCTCATCGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373587.3
ENST00000373588.9
ENST00000620110.4
CDS GCA 72 bp CCCTGTCTCCAGCTTGAAGCCATTGGCCCGAATCTGTaGCTTCTTCTGCTGTTTCAGGGCCCGGTCCCGCTT +
Preference number: 6 (lower is better)
Translates to: PCLQLEAIGPNL*LLLLFQGPVPL
Trigger: AAGCGGGACCGGGCCCTGAAACAGCAGAAGAAGGCACAGATTCGGGCCAATGGCTTCAAGCTGGAGACAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373588.9
ENST00000455734.1
ENST00000620110.4
CDS GCA 72 bp ATGAGCAGGTTGTTGCGGGGCATCTCGTTGCCCAGGTaGTTGTGGTACAGGTACTCCTTGGCCTGCATGCTC +
Preference number: 6 (lower is better)
Translates to: MSRLLRGISLPR*LWYRYSLACML
Trigger: GAGCATGCAGGCCAAGGAGTACCTGTACCACAAGCACCTGGGCAACGAGATGCCCCGCAACAACCTGCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373587.3
ENST00000373588.9
ENST00000620110.4
CDS GCA 72 bp GCTGCGTCTTGTCGATCTTGCAGCTCTGGCTCTCGGTaGACGTGTAGTGCTTGTTGTTCTGCACCGTGCGCT +
Preference number: 6 (lower is better)
Translates to: AASCRSCSSGSR*TCSACCSAPCA
Trigger: AGCGCACGGTGCAGAACAACAAGCACTACACGTGCACCGAGAGCCAGAGCTGCAAGATCGACAAGACGCAGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373588.9
ENST00000455734.1
ENST00000620110.4
CDS GCA 72 bp AGAAGGGACAGCGCTTGCGCTGCGTCTTGTCGATCTTaGAGCTCTGGCTCTCGGTGCACGTGTAGTGCTTGT +
Preference number: 6 (lower is better)
Translates to: RRDSACAASCRS*SSGSRCTCSAC
Trigger: ACAAGCACTACACGTGCACCGAGAGCCAGAGCTGCAAGATCGACAAGACGCAGCGCAAGCGCTGTCCCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373588.9
ENST00000455734.1
ENST00000620110.4
CDS GCA 72 bp AGCTTGAAGCCATTGGCCCGAATCTGTGCCTTCTTCTaGTGTTTCAGGGCCCGGTCCCGCTTGTACATCGGC +
Preference number: 6 (lower is better)
Translates to: SLKPLARICAFF*CFRARSRLYIG
Trigger: GCCGATGTACAAGCGGGACCGGGCCCTGAAACAGCAGAAGAAGGCACAGATTCGGGCCAATGGCTTCAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373588.9
ENST00000455734.1
ENST00000620110.4