RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NR4A3 (Homo sapiens)

Ensembl gene IDs: ENSG00000119508

Ensembl transcript IDs: ENST00000330847.1, ENST00000338488.8, ENST00000395097.7, ENST00000618101.4

Found 594 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATaGGCCATACCTCAGAAGGGATCGACAGGGAAGGTGAACACAGCC +
Preference number: 1 (lower is better)
Translates to: RAGIWFHQEWPKSLG*AIPQKGSTGKVNTA
Trigger: GGCTGTGTTCACCTTCCCTGTCGATCCCTTCTGAGGTATGGCCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR CCA 90 bp CAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATaGCCTAAAAGTCTTGGATGGGCCATACCTCAGAAGGGATCGACA +
Preference number: 1 (lower is better)
Translates to: QDSWTVRAGIWFHQE*PKSLGWAIPQKGST
Trigger: TGTCGATCCCTTCTGAGGTATGGCCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR CCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTaGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGCCATACCT +
Preference number: 1 (lower is better)
Translates to: NLIHFQDSWTVRAGI*FHQEWPKSLGWAIP
Trigger: AGGTATGGCCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR TCA 90 bp AAAGTCTTGGATGGGCCATACCTCAGAAGGGATCGACAGGGAAGGTaGACACAGCCTCTGCTAGGGATATTAACGTGTCATTTGCTAACA +
Preference number: 1 (lower is better)
Translates to: KVLDGPYLRRDRQGR*TQPLLGILTCHLLT
Trigger: TGTTAGCAAATGACACGTTAATATCCCTAGCAGAGGCTGTGTTCACCTTCCCTGTCGATCCCTTCTGAGGTATGGCCCATCCAAGACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR TCA 90 bp AGATTTTCATTGGCACAACCACCAGGAATCCTGCAACAATGTGTATaGCAGGTGCAGCACTGTCAGGGTCACTTGTTAAGGCATTTAGAG +
Preference number: 1 (lower is better)
Translates to: RFSLAQPPGILQQCV*QVQHCQGHLLRHLE
Trigger: CTCTAAATGCCTTAACAAGTGACCCTGACAGTGCTGCACCTGTCATACACATTGTTGCAGGATTCCTGGTGGTTGTGCCAATGAAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
3UTR TCA 90 bp AATCCTTATTGTCCCTGGTGCTTACCCTGTATGACCAGTTCCTGCTaGTTTGCATGTTCTTATCTAGGGATCAAATACTCAACTGACTTA +
Preference number: 1 (lower is better)
Translates to: NPYCPWCLPCMTSSC*FACSYLGIKYSTDL
Trigger: TAAGTCAGTTGAGTATTTGATCCCTAGATAAGAACATGCAAATCAGCAGGAACTGGTCATACAGGGTAAGCACCAGGGACAATAAGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR TCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATGATCGACAGGGAAGGTaGACACAGCCTCTGCTAGGG +
Preference number: 2 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHDRQGR*TQPLLG
Trigger: CCCTAGCAGAGGCTGTGTTCACCTTCCCTGTCGATC...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR GCA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGCCAAACCTATCCCTTTaGTGCGTAGCAAGCAGGTGC +
Preference number: 2 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLPNLSL*CVASRC
Trigger: GCACCTGCTTGCTACGCAGCAAAGGGATAGGTTTGG...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR CCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTGTCAGGGCAGGGATCTaGTTCCATCAAGAATGGCCT +
Preference number: 2 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPVRAGI*FHQEWP
Trigger: AGGCCATTCTTGATGGAACCAGATCCCTGCCCTGAC...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR TCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTGGTGCTTACCCTGTATaGCCAGTTCCTGCTGATTTG +
Preference number: 2 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPGAYPV*PVPADL
Trigger: CAAATCAGCAGGAACTGGTCATACAGGGTAAGCACC...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR TCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCTTAGAAAACCCTCATaGACTATAACCCCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHLRKPS*TITPSH
Trigger: GTGGGAGGGGGTTATAGTTCATGAGGGTTTTCTAAG...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR TCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTCTTAGAAAACCCTCATaGACTATAACCCCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPLRKPS*TITPSH
Trigger: GTGGGAGGGGGTTATAGTTCATGAGGGTTTTCTAAG...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR GCA 90 bp CAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGAGTTTCTGCCTTGTTTaGACCACATACGTACCTTTG +
Preference number: 2 (lower is better)
Translates to: QSGQGSGSIKNGLKVLDGSFCLV*TTYVPL
Trigger: CAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACT...CCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR GCA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGAGTTTCTGCCTTGTTTaGACCACATACGTACCTTTG +
Preference number: 2 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLSFCLV*TTYVPL
Trigger: CAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACT...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR CCA 90 bp GTAGAAACATACAAAAGGGAGTACGAACACGGAATGTTGAAACGCAGCCCACTAAGACACATCCTACCCTaGCGAACAACCCTTGGCTGT +
Preference number: 2 (lower is better)
Translates to: VETYKREYEHGMLKRSPLRHILP*RTTLGC
Trigger: ACAGCCAAGGGTTGTTCGCCAGGGTAGGATGTGTCT...TAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR CCA 90 bp GTAGAAACATACAAAAGGGAGTACGAACACGGAATGTTGAAACGCAGCCCACTAGTCAGGGCAGGGATCTaGTTCCATCAAGAATGGCCT +
Preference number: 2 (lower is better)
Translates to: VETYKREYEHGMLKRSPLVRAGI*FHQEWP
Trigger: AGGCCATTCTTGATGGAACCAGATCCCTGCCCTGAC...TAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR CCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTTCAGCTTCCAGGAGCTaGTGGTCTTGCAATAAATAC +
Preference number: 2 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPSASRS*WSCNKY
Trigger: GTATTTATTGCAAGACCACCAGCTCCTGGAAGCTGA...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR TCA 90 bp ATGTTCACACTGAGAGAGCTCTCCCGCCAAGGGGAGGAATCACCTGCTTTAATAGACTTATGGCGCTTCTaGATGAATATACCAGTCAGT +
Preference number: 2 (lower is better)
Translates to: MFTLRELSRQGEESPALIDLWRF*MNIPVS
Trigger: ACTGACTGGTATATTCATTCAGAAGCGCCATAAGTC...TATTAAAGCAGGTGATTCCTCCCCTTGGCGGGAGAGCTCTCTCAGTGTGAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR GCA 90 bp ATCTTTAAGACACATCCTACCCTGGCGAACAACCCTTGGCTGTTCTTGTTTTTACCAAACCTATCCCTTTaGTGCGTAGCAAGCAGGTGC +
Preference number: 2 (lower is better)
Translates to: IFKTHPTLANNPWLFLFLPNLSL*CVASRC
Trigger: GCACCTGCTTGCTACGCAGCAAAGGGATAGGTTTGG...TAAAAACAAGAACAGCCAAGGGTTGTTCGCCAGGGTAGGATGTGTCTTAAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR GCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTAGTTTCTGCCTTGTTTaGACCACATACGTACCTTTG +
Preference number: 2 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPSFCLV*TTYVPL
Trigger: CAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACT...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR GCA 90 bp TCGCTTCTCTCCACCAATGGTCTAATCCCTCTGAATAAGCAGCAGGTCAATCAAAATGTGTATGACAGGTaGAGCACTGTCAGGGTCACT +
Preference number: 2 (lower is better)
Translates to: SLLSTNGLIPLNKQQVNQNVYDR*STVRVT
Trigger: AGTGACCCTGACAGTGCTGCACCTGTCATACACATT...TTGATTGACCTGCTGCTTATTCAGAGGGATTAGACCATTGGTGGAGAGAAGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
3UTR-3UTR CCA 90 bp ATGTTCACACTGAGAGAGCTCTCCCGCCAAGGGGAGGAATCACCTGCTTTAATATGGTTCCATCAAGAATaGCCTAAAAGTCTTGGATGG +
Preference number: 2 (lower is better)
Translates to: MFTLRELSRQGEESPALIWFHQE*PKSLGW
Trigger: CCATCCAAGACTTTTAGGCCATTCTTGATGGAACCA...TATTAAAGCAGGTGATTCCTCCCCTTGGCGGGAGAGCTCTCTCAGTGTGAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR TCA 90 bp ACAGTTACATGTAATCCAGTTTATAATCTGATCCACTTTCAGGATAGCTGGACAGATCGACAGGGAAGGTaGACACAGCCTCTGCTAGGG +
Preference number: 2 (lower is better)
Translates to: TVTCNPVYNLIHFQDSWTDRQGR*TQPLLG
Trigger: CCCTAGCAGAGGCTGTGTTCACCTTCCCTGTCGATC...TGTCCAGCTATCCTGAAAGTGGATCAGATTATAAACTGGATTACATGTAACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR TCA 90 bp ATGTTCACACTGAGAGAGCTCTCCCGCCAAGGGGAGGAATCACCTGCTTTAATATATGGCGCTTCTGAATaGATATACCAGTCAGTTACT +
Preference number: 2 (lower is better)
Translates to: MFTLRELSRQGEESPALIYGASE*IYQSVT
Trigger: AGTAACTGACTGGTATATTCATTCAGAAGCGCCATA...TATTAAAGCAGGTGATTCCTCCCCTTGGCGGGAGAGCTCTCTCAGTGTGAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR TCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTGATCAAATACTCAACTaGCTTATGGCGCTTCTGAAT +
Preference number: 2 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPDQILN*LMALLN
Trigger: ATTCAGAAGCGCCATAAGTCAGTTGAGTATTTGATC...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR TCA 90 bp ATGTTCACACTGAGAGAGCTCTCCCGCCAAGGGGAGGAATCACCTGCTTTAATAGATCAAATACTCAACTaGCTTATGGCGCTTCTGAAT +
Preference number: 2 (lower is better)
Translates to: MFTLRELSRQGEESPALIDQILN*LMALLN
Trigger: ATTCAGAAGCGCCATAAGTCAGTTGAGTATTTGATC...TATTAAAGCAGGTGATTCCTCCCCTTGGCGGGAGAGCTCTCTCAGTGTGAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR TCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTATGACCAGTTCCTGCTaGTTTGCATGTTCTTATCTA +
Preference number: 2 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPMTSSC*FACSYL
Trigger: TAGATAAGAACATGCAAATCAGCAGGAACTGGTCAT...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR GCA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGTTAAAAGGAAGTTTCTaGCTTGTTTGCACCACATAC +
Preference number: 2 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLLKGSF*LVCTTY
Trigger: GTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAA...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR CAA 90 bp GGTAAATTAGGTCTTAGTCTTGATTCTGTTACCAGCTGTTTGACCTaGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTCTA +
Preference number: 2 (lower is better)
Translates to: GKLGLSLDSVTSCLT*SNSSPFNGPQFAPL
Trigger: TAGAGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCTGGTAACAGAATCAAGACTAAGACCTAATTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR TCA 90 bp ATGTTCACACTGAGAGAGCTCTCCCGCCAAGGGGAGGAATCACCTGCTTTAATATGTCATTTGCTAACATaGCTGCCTCCTTTTTATTTC +
Preference number: 2 (lower is better)
Translates to: MFTLRELSRQGEESPALICHLLT*LPPFYF
Trigger: GAAATAAAAAGGAGGCAGTCATGTTAGCAAATGACA...TATTAAAGCAGGTGATTCCTCCCCTTGGCGGGAGAGCTCTCTCAGTGTGAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR GCA 90 bp ATGTTCACACTGAGAGAGCTCTCCCGCCAAGGGGAGGAATCACCTGCTTTAATAAGTGCTAAACAGTACTaGCTTAAAAGTCACTGCAAA +
Preference number: 2 (lower is better)
Translates to: MFTLRELSRQGEESPALISAKQY*LKSHCK
Trigger: TTTGCAGTGACTTTTAAGGCAGTACTGTTTAGCACT...TATTAAAGCAGGTGATTCCTCCCCTTGGCGGGAGAGCTCTCTCAGTGTGAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR GCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTAGTGCTAAACAGTACTaGCTTAAAAGTCACTGCAAA +
Preference number: 2 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPSAKQY*LKSHCK
Trigger: TTTGCAGTGACTTTTAAGGCAGTACTGTTTAGCACT...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR GCA 90 bp TTAAATATTGTAGCCATTTCCACTGTAGGCAGGAGAGAGCCAAAAGCAGGAACCAACCACCAGGAATCCTaGAACAATGTGTATGACAGG +
Preference number: 2 (lower is better)
Translates to: LNIVAISTVGRREPKAGTNHQES*NNVYDR
Trigger: CCTGTCATACACATTGTTGCAGGATTCCTGGTGGTT...GGTTCCTGCTTTTGGCTCTCTCCTGCCTACAGTGGAAATGGCTACAATATTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
3UTR-3UTR CCA 90 bp AAGGAAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATAGACACATCCTACCCTaGCGAACAACCCTTGGCTGT +
Preference number: 2 (lower is better)
Translates to: KEIKRKFLPCLHHIRTFDRHILP*RTTLGC
Trigger: ACAGCCAAGGGTTGTTCGCCAGGGTAGGATGTGTCT...ATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR CAA 90 bp GCATTAACAGTAGAAACATACAAAAGGGAGTACGAACACGGAATGTaGAAACGCAGCCCACTAATCCTTCCTAGTACTCACACTCATACT +
Preference number: 2 (lower is better)
Translates to: ALTVETYKREYEHGM*KRSPLILPSTHTHT
Trigger: AGTATGAGTGTGAGTACTAGGAAGGATTAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTACTGTTAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR TCA 90 bp AGATCACGAGATAAATCTACAAATTGTAGTTTGTCTGTGCAGATTTTCATTGGCCTGCAACAATGTGTATaGCAGGTGCAGCACTGTCAG +
Preference number: 2 (lower is better)
Translates to: RSRDKSTNCSLSVQIFIGLQQCV*QVQHCQ
Trigger: CTGACAGTGCTGCACCTGTCATACACATTGTTGCAG...GCCAATGAAAATCTGCACAGACAAACTACAATTTGTAGATTTATCTCGTGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
3UTR-3UTR GCA 90 bp GTAGAAACATACAAAAGGGAGTACGAACACGGAATGTTGAAACGCAGCCCACTATTAAAAGGAAGTTTCTaGCTTGTTTGCACCACATAC +
Preference number: 2 (lower is better)
Translates to: VETYKREYEHGMLKRSPLLKGSF*LVCTTY
Trigger: GTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAA...TAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR GCA 90 bp TCGCTTCTCTCCACCAATGGTCTAATCCCTCTGAATAAGCAGCAGGTCAATCAAATTGTAGTTTGTCTGTaGAGATTTTCATTGGCACAA +
Preference number: 2 (lower is better)
Translates to: SLLSTNGLIPLNKQQVNQIVVCL*RFSLAQ
Trigger: TTGTGCCAATGAAAATCTGCACAGACAAACTACAAT...TTGATTGACCTGCTGCTTATTCAGAGGGATTAGACCATTGGTGGAGAGAAGCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
3UTR-3UTR CCA 90 bp ACAGTTACATGTAATCCAGTTTATAATCTGATCCACTTTCAGGATAGCTGGACACCTAAAAGTCTTGGATaGGCCATACCTCAGAAGGGA +
Preference number: 2 (lower is better)
Translates to: TVTCNPVYNLIHFQDSWTPKSLG*AIPQKG
Trigger: TCCCTTCTGAGGTATGGCCCATCCAAGACTTTTAGG...TGTCCAGCTATCCTGAAAGTGGATCAGATTATAAACTGGATTACATGTAACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR CAA 90 bp GTAGTCACTTTGTCTAGATCACGAGATAAATCTACAAATTGTAGTTaGTCTGTGCAGATTTTCATTGGCACAACCACCAGGAATCCTGCA +
Preference number: 2 (lower is better)
Translates to: VVTLSRSRDKSTNCS*SVQIFIGTTTRNPA
Trigger: TGCAGGATTCCTGGTGGTTGTGCCAATGAAAATCTGCACAGACAAACTACAATTTGTAGATTTATCTCGTGATCTAGACAAAGTGACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
3UTR-3UTR CCA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTGGTTCCATCAAGAATaGCCTAAAAGTCTTGGATGG +
Preference number: 2 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSWFHQE*PKSLGW
Trigger: CCATCCAAGACTTTTAGGCCATTCTTGATGGAACCA...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR TCA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTCCACATACGTACCTTTaGTACAGGAAGCATATTTTC +
Preference number: 2 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSPHTYL*YRKHIF
Trigger: GAAAATATGCTTCCTGTATCAAAGGTACGTATGTGG...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR TCA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTTGTTTTGCCATGTCTaGTTTGTAGGTAATCCTCCA +
Preference number: 2 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSLFCHV*FVGNPP
Trigger: TGGAGGATTACCTACAAATCAGACATGGCAAAACAA...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR TCA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTATGACCAGTTCCTGCTaGTTTGCATGTTCTTATCTA +
Preference number: 2 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSMTSSC*FACSYL
Trigger: TAGATAAGAACATGCAAATCAGCAGGAACTGGTCAT...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR GCA 90 bp ATGACAGGTGCAGCACTGTCAGGGTCACTTGTTAAGGCATTTAGAGATTCAATAGCAAAAATTATTTGCTaGAATGGATGCACTGAATTG +
Preference number: 2 (lower is better)
Translates to: MTGAALSGSLVKAFRDSIAKIIC*NGCTEL
Trigger: CAATTCAGTGCATCCATTGCAGCAAATAATTTTTGC...TATTGAATCTCTAAATGCCTTAACAAGTGACCCTGACAGTGCTGCACCTGTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338488.8
3UTR-3UTR TCA 90 bp ACAGTTACATGTAATCCAGTTTATAATCTGATCCACTTTCAGGATAGCTGGACACCACATACGTACCTTTaGTACAGGAAGCATATTTTC +
Preference number: 2 (lower is better)
Translates to: TVTCNPVYNLIHFQDSWTPHTYL*YRKHIF
Trigger: GAAAATATGCTTCCTGTATCAAAGGTACGTATGTGG...TGTCCAGCTATCCTGAAAGTGGATCAGATTATAAACTGGATTACATGTAACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR TCA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTGTCATTTGCTAACATaGCTGCCTCCTTTTTATTTC +
Preference number: 2 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSCHLLT*LPPFYF
Trigger: GAAATAAAAAGGAGGCAGTCATGTTAGCAAATGACA...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR TCA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTGATCAAATACTCAACTaGCTTATGGCGCTTCTGAAT +
Preference number: 2 (lower is better)
Translates to: EALIVVITMEDRRTCYHLDQILN*LMALLN
Trigger: ATTCAGAAGCGCCATAAGTCAGTTGAGTATTTGATC...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR GCA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTCAGTTCCTGCTGATTTaGATGTTCTTATCTAGGGAT +
Preference number: 2 (lower is better)
Translates to: EALIVVITMEDRRTCYHLQFLLI*MFLSRD
Trigger: ATCCCTAGATAAGAACATGCAAATCAGCAGGAACTG...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR CCA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTCAAAGCAACTATAATTaGATTCCCCAGAAAGAGTTT +
Preference number: 2 (lower is better)
Translates to: EALIVVITMEDRRTCYHLQSNYN*IPQKEF
Trigger: AAACTCTTTCTGGGGAATCCAATTATAGTTGCTTTG...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR CCA 90 bp AAGGAAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATCAAAGCAACTATAATTaGATTCCCCAGAAAGAGTTT +
Preference number: 2 (lower is better)
Translates to: KEIKRKFLPCLHHIRTFDQSNYN*IPQKEF
Trigger: AAACTCTTTCTGGGGAATCCAATTATAGTTGCTTTG...ATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTTCCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR GCA 90 bp AGATCACGAGATAAATCTACAAATTGTAGTTTGTCTGTGCAGATTTTCATTGGCATTTGCTGCAATGGATaGACTGAATTGCTAAATGAA +
Preference number: 2 (lower is better)
Translates to: RSRDKSTNCSLSVQIFIGICCNG*TELLNE
Trigger: TTCATTTAGCAATTCAGTGCATCCATTGCAGCAAAT...GCCAATGAAAATCTGCACAGACAAACTACAATTTGTAGATTTATCTCGTGATCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
3UTR-3UTR CAA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGTCCAAACCTATCCCTTaGCTGCGTAGCAAGCAGGTG +
Preference number: 3 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLSKPIP*LRSKQV
Trigger: CACCTGCTTGCTACGCAGCAAAGGGATAGGTTTGGA...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR TCA 72 bp GATGGGCCATACCTCAGAAGGGATCGACAGGGAAGGTaGACACAGCCTCTGCTAGGGATATTAACGTGTCAT +
Preference number: 3 (lower is better)
Translates to: DGPYLRRDRQGR*TQPLLGILTCH
Trigger: ATGACACGTTAATATCCCTAGCAGAGGCTGTGTTCACCTTCCCTGTCGATCCCTTCTGAGGTATGGCCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR CCA 72 bp TGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATaGCCTAAAAGTCTTGGATGGGCCATACCTCAGAAG +
Preference number: 3 (lower is better)
Translates to: WTVRAGIWFHQE*PKSLGWAIPQK
Trigger: CTTCTGAGGTATGGCCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR CCA 72 bp ATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATaGGCCATACCTCAGAAGGGATCGACAGGGAAGGTG +
Preference number: 3 (lower is better)
Translates to: IWFHQEWPKSLG*AIPQKGSTGKV
Trigger: CACCTTCCCTGTCGATCCCTTCTGAGGTATGGCCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR CCA 72 bp CACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTaGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGG +
Preference number: 3 (lower is better)
Translates to: HFQDSWTVRAGI*FHQEWPKSLGW
Trigger: CCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR CAA 90 bp CAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGCCTGCTGGGATAGCATaGTCCAAAAGTGCTTTGTTA +
Preference number: 3 (lower is better)
Translates to: QSGQGSGSIKNGLKVLDGPAGIA*SKSALL
Trigger: TAACAAAGCACTTTTGGACAATGCTATCCCAGCAGG...CCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR CAA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGCCTGCTGGGATAGCATaGTCCAAAAGTGCTTTGTTA +
Preference number: 3 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLPAGIA*SKSALL
Trigger: TAACAAAGCACTTTTGGACAATGCTATCCCAGCAGG...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR CAA 90 bp ATGTTCACACTGAGAGAGCTCTCCCGCCAAGGGGAGGAATCACCTGCTTTAATAGGAACTCTGGTGGGGTaGATAGAACACAACCAAAAC +
Preference number: 3 (lower is better)
Translates to: MFTLRELSRQGEESPALIGTLVG*IEHNQN
Trigger: GTTTTGGTTGTGTTCTATCAACCCCACCAGAGTTCC...TATTAAAGCAGGTGATTCCTCCCCTTGGCGGGAGAGCTCTCTCAGTGTGAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR CAA 90 bp ATGTTCACACTGAGAGAGCTCTCCCGCCAAGGGGAGGAATCACCTGCTTTAATACCTGCTGGGATAGCATaGTCCAAAAGTGCTTTGTTA +
Preference number: 3 (lower is better)
Translates to: MFTLRELSRQGEESPALIPAGIA*SKSALL
Trigger: TAACAAAGCACTTTTGGACAATGCTATCCCAGCAGG...TATTAAAGCAGGTGATTCCTCCCCTTGGCGGGAGAGCTCTCTCAGTGTGAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR CAA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATAAGGAAGTTTCTGCCTaGTTTGCACCACATACGTAC +
Preference number: 3 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHKEVSA*FAPHTY
Trigger: GTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTT...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR CAA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTAAGGAAGTTTCTGCCTaGTTTGCACCACATACGTAC +
Preference number: 3 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPKEVSA*FAPHTY
Trigger: GTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTT...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR CAA 90 bp AGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAACAGCCATTATTGTTTaGCCATGTCTGATTTGTAGG +
Preference number: 3 (lower is better)
Translates to: RIAGQSGQGSGSIKNGLKTAIIV*PCLICR
Trigger: CCTACAAATCAGACATGGCAAAACAATAATGGCTGT...TTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR CAA 90 bp CACCAGGAATCCTGCAACAATGTGTATGACAGGTGCAGCACTGTCAGGGTCACTAATGGATGCACTGAATaGCTAAATGAAGCGAGAAAT +
Preference number: 3 (lower is better)
Translates to: HQESCNNVYDRCSTVRVTNGCTE*LNEARN
Trigger: ATTTCTCGCTTCATTTAGCAATTCAGTGCATCCATT...AGTGACCCTGACAGTGCTGCACCTGTCATACACATTGTTGCAGGATTCCTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
3UTR-3UTR CAA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATACCACATACGTACCTTaGATACAGGAAGCATATTTT +
Preference number: 3 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHTTYVP*IQEAYF
Trigger: AAAATATGCTTCCTGTATCAAAGGTACGTATGTGGT...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR TCA 72 bp TGTCCCTGGTGCTTACCCTGTATGACCAGTTCCTGCTaGTTTGCATGTTCTTATCTAGGGATCAAATACTCA +
Preference number: 3 (lower is better)
Translates to: CPWCLPCMTSSC*FACSYLGIKYS
Trigger: TGAGTATTTGATCCCTAGATAAGAACATGCAAATCAGCAGGAACTGGTCATACAGGGTAAGCACCAGGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR CAA 90 bp AAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATACAGTCCAAACCTATCCCTTaGCTGCGTAGCAAGCAGGTG +
Preference number: 3 (lower is better)
Translates to: KLKGSFCLVCTTYVPLIQSKPIP*LRSKQV
Trigger: CACCTGCTTGCTACGCAGCAAAGGGATAGGTTTGGA...CTGTATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR CAA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTAATGGCCTAAAAGTCTaGGATGGGCCATACCTCAGA +
Preference number: 3 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSNGLKV*DGPYLR
Trigger: TCTGAGGTATGGCCCATCCAAGACTTTTAGGCCATT...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR CAA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTACCAGCTGTTTGACCTaGAGTAACTCTTCACCCTTC +
Preference number: 3 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSTSCLT*SNSSPF
Trigger: GAAGGGTGAAGAGTTACTCAAGGTCAAACAGCTGGT...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR CAA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTCCTGGCGAACAACCCTaGGCTGTTCTTGTTTTTAAA +
Preference number: 3 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSPGEQP*AVLVFK
Trigger: TTTAAAAACAAGAACAGCCAAGGGTTGTTCGCCAGG...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR CAA 90 bp ACAGTTACATGTAATCCAGTTTATAATCTGATCCACTTTCAGGATAGCTGGACAAATGGCCTAAAAGTCTaGGATGGGCCATACCTCAGA +
Preference number: 3 (lower is better)
Translates to: TVTCNPVYNLIHFQDSWTNGLKV*DGPYLR
Trigger: TCTGAGGTATGGCCCATCCAAGACTTTTAGGCCATT...TGTCCAGCTATCCTGAAAGTGGATCAGATTATAAACTGGATTACATGTAACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR CAA 90 bp AAGGAAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATCCTGGCGAACAACCCTaGGCTGTTCTTGTTTTTAAA +
Preference number: 3 (lower is better)
Translates to: KEIKRKFLPCLHHIRTFDPGEQP*AVLVFK
Trigger: TTTAAAAACAAGAACAGCCAAGGGTTGTTCGCCAGG...ATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR CAA 90 bp ACAGTTACATGTAATCCAGTTTATAATCTGATCCACTTTCAGGATAGCTGGACACCTGGCGAACAACCCTaGGCTGTTCTTGTTTTTAAA +
Preference number: 3 (lower is better)
Translates to: TVTCNPVYNLIHFQDSWTPGEQP*AVLVFK
Trigger: TTTAAAAACAAGAACAGCCAAGGGTTGTTCGCCAGG...TGTCCAGCTATCCTGAAAGTGGATCAGATTATAAACTGGATTACATGTAACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR CAA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTAAGTTTCTGCCTTGTTaGCACCACATACGTACCTTT +
Preference number: 3 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSKFLPC*HHIRTF
Trigger: AAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTT...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR TCA 72 bp GAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTaGTACAGGAAGCATATTTTCAAGGGACCAATCTTT +
Preference number: 3 (lower is better)
Translates to: EVSALFAPHTYL*YRKHIFKGPIF
Trigger: AAAGATTGGTCCCTTGAAAATATGCTTCCTGTATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR CAA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTAAGTTTCTGCCTTGTTaGCACCACATACGTACCTTT +
Preference number: 3 (lower is better)
Translates to: EALIVVITMEDRRTCYHLKFLPC*HHIRTF
Trigger: AAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTT...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR CAA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTACAGCCATTATTGTTTaGCCATGTCTGATTTGTAGG +
Preference number: 3 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSTAIIV*PCLICR
Trigger: CCTACAAATCAGACATGGCAAAACAATAATGGCTGT...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR GCA 72 bp GGAAGAAGGAAATTAAAAGGAAGTTTCTGCCTTGTTTaGACCACATACGTACCTTTGATACAGGAAGCATAT +
Preference number: 3 (lower is better)
Translates to: GRRKLKGSFCLV*TTYVPLIQEAY
Trigger: ATATGCTTCCTGTATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTTCCTTCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR CAA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTATCTGGGTTATACTTaGCAGCAATTAGGCAATTCA +
Preference number: 3 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSYLGYT*QQLGNS
Trigger: TGAATTGCCTAATTGCTGCAAAGTATAACCCAGATA...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR TCA 72 bp GGATCAAATACTCAACTGACTTATGGCGCTTCTGAATaGATATACCAGTCAGTTACTATAACTGAAGCAAGT +
Preference number: 3 (lower is better)
Translates to: GSNTQLTYGASE*IYQSVTITEAS
Trigger: ACTTGCTTCAGTTATAGTAACTGACTGGTATATTCATTCAGAAGCGCCATAAGTCAGTTGAGTATTTGATCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR TCA 72 bp ATTTGCATGTTCTTATCTAGGGATCAAATACTCAACTaGCTTATGGCGCTTCTGAATGAATATACCAGTCAG +
Preference number: 3 (lower is better)
Translates to: ICMFLSRDQILN*LMALLNEYTSQ
Trigger: CTGACTGGTATATTCATTCAGAAGCGCCATAAGTCAGTTGAGTATTTGATCCCTAGATAAGAACATGCAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR-3UTR CAA 90 bp ACAGTTACATGTAATCCAGTTTATAATCTGATCCACTTTCAGGATAGCTGGACAACCACATACGTACCTTaGATACAGGAAGCATATTTT +
Preference number: 3 (lower is better)
Translates to: TVTCNPVYNLIHFQDSWTTTYVP*IQEAYF
Trigger: AAAATATGCTTCCTGTATCAAAGGTACGTATGTGGT...TGTCCAGCTATCCTGAAAGTGGATCAGATTATAAACTGGATTACATGTAACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp CACCAGGAATCCTGCAACAATGTGTATGACAGGTGCAGCACTGTCAGGGTCACTGGCAGCCCGTACGGGTaGCTCTCAAGCGCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: HQESCNNVYDRCSTVRVTGSPYG*LSSAAA
Trigger: GGCCGCCGCGCTTGAGAGCCACCCGTACGGGCTGCC...AGTGACCCTGACAGTGCTGCACCTGTCATACACATTGTTGCAGGATTCCTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CCA 90 bp ATGTTCACACTGAGAGAGCTCTCCCGCCAAGGGGAGGAATCACCTGCTTTAATAGGCAGCCCGTACGGGTaGCTCTCAAGCGCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: MFTLRELSRQGEESPALIGSPYG*LSSAAA
Trigger: GGCCGCCGCGCTTGAGAGCCACCCGTACGGGCTGCC...TATTAAAGCAGGTGATTCCTCCCCTTGGCGGGAGAGCTCTCTCAGTGTGAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTGCGGCGACGGCAGGCTaGGACTCTCGCCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPAATAG*DSRPAG
Trigger: GCCTGCTGGGCGAGAGTCCCAGCCTGCCGTCGCCGC...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGACGACGAGCTCCTGCTaGGCGGCGACGGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLTTSSC*AATAGW
Trigger: CCAGCCTGCCGTCGCCGCCCAGCAGGAGCTCGTCGT...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp CAGAGCTCGCTTCTCTCCACCAATGGTCTAATCCCTCTGAATAAGCAGCAGGTCCTCCGCTCTCCCGGCTaGGCGTTCGCTCGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: QSSLLSTNGLIPLNKQQVLRSPG*AFARSL
Trigger: GAGAGAGCGAGCGAACGCGCAGCCGGGAGAGCGGAG...GACCTGCTGCTTATTCAGAGGGATTAGACCATTGGTGGAGAGAAGCGAGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR GCA 90 bp CAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGCACCTCCACGGCCACTaGCGGCACCGTCAGCGTTGC +
Preference number: 4 (lower is better)
Translates to: QSGQGSGSIKNGLKVLDGHLHGH*RHRQRC
Trigger: GCAACGCTGACGGTGCCGGCAGTGGCCGTGGAGGTG...CCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCCGGGCTTGCCGGGCTaGCCTCTTCCGCAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHPGLPG*PLPQWA
Trigger: AGCCCACTGCGGAAGAGGGCAGCCCGGCAAGCCCGG...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp CAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGAAGCGCCGGCAGTGCTaGCCGGCACCGCTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: QSGQGSGSIKNGLKVLDGKRRQC*PAPLRV
Trigger: GACCCTTAGCGGTGCCGGGCAGCACTGCCGGCGCTT...CCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATGCGAAGCGCCGGCAGTaGTGCCCGGCACCGCTAAGG +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHAKRRQ*CPAPLR
Trigger: CCTTAGCGGTGCCGGGCAGCACTGCCGGCGCTTCGC...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp AGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAACAGACGACGAGCTCCTaGTGGGCGGCGACGGCAGGC +
Preference number: 4 (lower is better)
Translates to: RIAGQSGQGSGSIKNGLKQTTSS*WAATAG
Trigger: GCCTGCCGTCGCCGCCCAGCAGGAGCTCGTCGTCTG...TTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGCGCACACGGCACACGTaGCCTCGCCAGACGACGAGC +
Preference number: 4 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLRTRHT*PRQTTS
Trigger: GCTCGTCGTCTGGCGAGGGCACGTGTGCCGTGTGCG...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp CAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGGCGGTGAGCGGCTGGTaGGGGATGCTGCGATCCCGA +
Preference number: 4 (lower is better)
Translates to: QSGQGSGSIKNGLKVLDGAVSGW*GMLRSR
Trigger: TCGGGATCGCAGCATCCCCCACCAGCCGCTCACCGC...CCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp AGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGGAAGGCCGGCGTGGTaGGGGTGGACGGTGGGGACT +
Preference number: 4 (lower is better)
Translates to: RIAGQSGQGSGSIKNGLKGRPAW*GWTVGT
Trigger: AGTCCCCACCGTCCACCCCCACCACGCCGGCCTTCC...TTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATGGAAGGCCGGCGTGGTaGGGGTGGACGGTGGGGACT +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHGRPAW*GWTVGT
Trigger: AGTCCCCACCGTCCACCCCCACCACGCCGGCCTTCC...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp CACCAGGAATCCTGCAACAATGTGTATGACAGGTGCAGCACTGTCAGGGTCACTGTCTGTGTGTGCGAGTaGGGGAGCGGGTGTGAGCGC +
Preference number: 4 (lower is better)
Translates to: HQESCNNVYDRCSTVRVTVCVCE*GSGCER
Trigger: GCGCTCACACCCGCTCCCTCACTCGCACACACAGAC...AGTGACCCTGACAGTGCTGCACCTGTCATACACATTGTTGCAGGATTCCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR TCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATAGGGCAAGAGGGGTGTaGGCGCGCGGGAGAGCGAAG +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHRARGV*ARGRAK
Trigger: CTTCGCTCTCCCGCGCGCTCACACCCCTCTTGCCCT...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTGCGGCGGCGAGGGCTTaGAGTGGAAGAGCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPAAARA*SGRAGS
Trigger: GCTTCCCGCTCTTCCACTTCAAGCCCTCGCCGCCGC...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp CAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGCGGCACCGTCAGCGTTaGAAAGTGAGCCCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: QSGQGSGSIKNGLKVLDGRHRQR*KVSPGG
Trigger: CCCTCCCGGGCTCACTTTGCAACGCTGACGGTGCCG...CCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp CAGAGCTCGCTTCTCTCCACCAATGGTCTAATCCCTCTGAATAAGCAGCAGGTCGCGGCTGGTGGGGGATaGTGCGATCCCGACTCATGG +
Preference number: 4 (lower is better)
Translates to: QSSLLSTNGLIPLNKQQVAAGGG*CDPDSW
Trigger: CCATGAGTCGGGATCGCAGCATCCCCCACCAGCCGC...GACCTGCTGCTTATTCAGAGGGATTAGACCATTGGTGGAGAGAAGCGAGCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR GCA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGCGGCTGGTGGGGGATaGTGCGATCCCGACTCATGG +
Preference number: 4 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLAAGGG*CDPDSW
Trigger: CCATGAGTCGGGATCGCAGCATCCCCCACCAGCCGC...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp CAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGGCGGCTGGTGGGGGATaGTGCGATCCCGACTCATGG +
Preference number: 4 (lower is better)
Translates to: QSGQGSGSIKNGLKVLDGAAGGG*CDPDSW
Trigger: CCATGAGTCGGGATCGCAGCATCCCCCACCAGCCGC...CCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATAAGCGCCGGCAGTGCTaGCCGGCACCGCTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHKRRQC*PAPLRV
Trigger: GACCCTTAGCGGTGCCGGGCAGCACTGCCGGCGCTT...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp AGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGAGGCGGTGAGCGGCTaGTGGGGGATGCTGCGATCC +
Preference number: 4 (lower is better)
Translates to: RIAGQSGQGSGSIKNGLKEAVSG*WGMLRS
Trigger: GGATCGCAGCATCCCCCACCAGCCGCTCACCGCCTC...TTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp CAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGGGCGAGGGCTTGAAGTaGAAGAGCGGGAAGCGCGCG +
Preference number: 4 (lower is better)
Translates to: QSGQGSGSIKNGLKVLDGGEGLK*KSGKRA
Trigger: CGCGCGCTTCCCGCTCTTCCACTTCAAGCCCTCGCC...CCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp CAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGGGGCACCCAGGACCTTaGACTCGGTGGGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: QSGQGSGSIKNGLKVLDGGHPGP*TRWAPE
Trigger: CTCTGGAGCCCACCGAGTCCAAGGTCCTGGGTGCCC...CCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATGTCTGTGTGTGCGAGTaGGGGAGCGGGTGTGAGCGC +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHVCVCE*GSGCER
Trigger: GCGCTCACACCCGCTCCCTCACTCGCACACACAGAC...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTGTGTGTGCGAGTaGGGGAGCGGGTGTGAGCGC +
Preference number: 4 (lower is better)
Translates to: RIAGQSGQGSGSIKNGLKVCVCE*GSGCER
Trigger: GCGCTCACACCCGCTCCCTCACTCGCACACACAGAC...TTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp CAGAGCTCGCTTCTCTCCACCAATGGTCTAATCCCTCTGAATAAGCAGCAGGTCCTCTCCAGCGGAGGCTaGGAGTGTAGGAGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: QSSLLSTNGLIPLNKQQVLSSGG*ECRRSG
Trigger: TCCGCTCCTCCTACACTCTCAGCCTCCGCTGGAGAG...GACCTGCTGCTTATTCAGAGGGATTAGACCATTGGTGGAGAGAAGCGAGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR GCA 90 bp CACCAGGAATCCTGCAACAATGTGTATGACAGGTGCAGCACTGTCAGGGTCACTGCTGGTGGGGGATGCTaGGATCCCGACTCATGGGAG +
Preference number: 4 (lower is better)
Translates to: HQESCNNVYDRCSTVRVTAGGGC*DPDSWE
Trigger: CTCCCATGAGTCGGGATCGCAGCATCCCCCACCAGC...AGTGACCCTGACAGTGCTGCACCTGTCATACACATTGTTGCAGGATTCCTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CCA 90 bp AGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGCTGAATGGTGGGGCTaGGGGTCTCTCCAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: RIAGQSGQGSGSIKNGLKAEWWG*GSLQRR
Trigger: CCTCCGCTGGAGAGACCCCCAGCCCCACCATTCAGC...TTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp ATGTTCACACTGAGAGAGCTCTCCCGCCAAGGGGAGGAATCACCTGCTTTAATAGATGGTGATGGTAGCTaGGCGCCCGCCCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: MFTLRELSRQGEESPALIDGDGS*APAPPP
Trigger: TGGAGGAGGGGCGGGCGCCCAGCTACCATCACCATC...TATTAAAGCAGGTGATTCCTCCCCTTGGCGGGAGAGCTCTCTCAGTGTGAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATGATGGTGATGGTAGCTaGGCGCCCGCCCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHDGDGS*APAPPP
Trigger: TGGAGGAGGGGCGGGCGCCCAGCTACCATCACCATC...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp CACCAGGAATCCTGCAACAATGTGTATGACAGGTGCAGCACTGTCAGGGTCACTCTCCGGGCTGGAGGCTaGAGGAATGGATGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HQESCNNVYDRCSTVRVTLRAGG*RNGWLL
Trigger: CAGCAGCCATCCATTCCTCCAGCCTCCAGCCCGGAG...AGTGACCCTGACAGTGCTGCACCTGTCATACACATTGTTGCAGGATTCCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CCA 90 bp CAGAGCTCGCTTCTCTCCACCAATGGTCTAATCCCTCTGAATAAGCAGCAGGTCCCTCGTCCTCCGGGCTaGAGGCTGGAGGAATGGATG +
Preference number: 4 (lower is better)
Translates to: QSSLLSTNGLIPLNKQQVPRPPG*RLEEWM
Trigger: CATCCATTCCTCCAGCCTCCAGCCCGGAGGACGAGG...GACCTGCTGCTTATTCAGAGGGATTAGACCATTGGTGGAGAGAAGCGAGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CCA 90 bp TTAAATATTGTAGCCATTTCCACTGTAGGCAGGAGAGAGCCAAAAGCAGGAACCGCGGCGACGGCAGGCTaGGACTCTCGCCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LNIVAISTVGRREPKAGTAATAG*DSRPAG
Trigger: GCCTGCTGGGCGAGAGTCCCAGCCTGCCGTCGCCGC...GGTTCCTGCTTTTGGCTCTCTCCTGCCTACAGTGGAAATGGCTACAATATTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CCA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGGACCTTGGACTCGGTaGGCTCCAGAGCCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLGPWTR*APEPVP
Trigger: AGGGACAGGCTCTGGAGCCCACCGAGTCCAAGGTCC...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTGGGCACCCAGGACCTTaGACTCGGTGGGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPGHPGP*TRWAPE
Trigger: CTCTGGAGCCCACCGAGTCCAAGGTCCTGGGTGCCC...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCTCTCCAGCGGAGGCTaGGAGTGTAGGAGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHLSSGG*ECRRSG
Trigger: TCCGCTCCTCCTACACTCTCAGCCTCCGCTGGAGAG...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAACCTCCACGAAGGTACTaGTGCTGGGCAGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: RIAGQSGQGSGSIKNGLKPPRRY*CWAGTW
Trigger: CCACGTCCCTGCCCAGCATCAGTACCTTCGTGGAGG...TTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGAGAGCGAAGTGTGTGTaGGGAGCCTGTGTGCGCGCT +
Preference number: 4 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLRAKCV*GACVRA
Trigger: AGCGCGCACACAGGCTCCGCACACACACTTCGCTCT...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTGCTGGTGGGGGATGCTaGGATCCCGACTCATGGGAG +
Preference number: 4 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPAGGGC*DPDSWE
Trigger: CTCCCATGAGTCGGGATCGCAGCATCCCCCACCAGC...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp GTAGAAACATACAAAAGGGAGTACGAACACGGAATGTTGAAACGCAGCCCACTACAGACGACGAGCTCCTaGTGGGCGGCGACGGCAGGC +
Preference number: 4 (lower is better)
Translates to: VETYKREYEHGMLKRSPLQTTSS*WAATAG
Trigger: GCCTGCCGTCGCCGCCCAGCAGGAGCTCGTCGTCTG...TAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp TCGCTTCTCTCCACCAATGGTCTAATCCCTCTGAATAAGCAGCAGGTCAATCAACGCACACGGCACACGTaGCCTCGCCAGACGACGAGC +
Preference number: 4 (lower is better)
Translates to: SLLSTNGLIPLNKQQVNQRTRHT*PRQTTS
Trigger: GCTCGTCGTCTGGCGAGGGCACGTGTGCCGTGTGCG...TTGATTGACCTGCTGCTTATTCAGAGGGATTAGACCATTGGTGGAGAGAAGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CCA 90 bp AGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGAGCGCGTCTGTGTATaGGGAGCGGAGGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: RIAGQSGQGSGSIKNGLKERVCV*GAEEEQ
Trigger: CTGCTCCTCCTCCGCTCCCCATACACAGACGCGCTC...TTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp CAGAGCTCGCTTCTCTCCACCAATGGTCTAATCCCTCTGAATAAGCAGCAGGTCTGCGATCCCGACTCATaGGAGAGCACAGCCGAGAGG +
Preference number: 4 (lower is better)
Translates to: QSSLLSTNGLIPLNKQQVCDPDS*ESTAER
Trigger: CCTCTCGGCTGTGCTCTCCCATGAGTCGGGATCGCA...GACCTGCTGCTTATTCAGAGGGATTAGACCATTGGTGGAGAGAAGCGAGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CCA 90 bp CAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGTGCGATCCCGACTCATaGGAGAGCACAGCCGAGAGG +
Preference number: 4 (lower is better)
Translates to: QSGQGSGSIKNGLKVLDGCDPDS*ESTAER
Trigger: CCTCTCGGCTGTGCTCTCCCATGAGTCGGGATCGCA...CCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp CAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGTGCCCTCTTCCGCAGTaGGCTTTGAGTGCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: QSGQGSGSIKNGLKVLDGCPLPQ*ALSAVA
Trigger: CGCCACAGCACTCAAAGCCCACTGCGGAAGAGGGCA...CCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp CAGAGCTCGCTTCTCTCCACCAATGGTCTAATCCCTCTGAATAAGCAGCAGGTCATCTTGCGCGCTGAATaGTGGGGCTGGGGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: QSSLLSTNGLIPLNKQQVILRAE*WGWGSL
Trigger: GAGAGACCCCCAGCCCCACCATTCAGCGCGCAAGAT...GACCTGCTGCTTATTCAGAGGGATTAGACCATTGGTGGAGAGAAGCGAGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CCA 90 bp CAGAGCTCGCTTCTCTCCACCAATGGTCTAATCCCTCTGAATAAGCAGCAGGTCAGTACATGGAGGTGCTaGGCAGCACCTCGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: QSSLLSTNGLIPLNKQQVSTWRC*AAPRPP
Trigger: CGGAGGACGAGGTGCTGCCCAGCACCTCCATGTACT...GACCTGCTGCTTATTCAGAGGGATTAGACCATTGGTGGAGAGAAGCGAGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CCA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGAGTACATGGAGGTGCTaGGCAGCACCTCGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLSTWRC*AAPRPP
Trigger: CGGAGGACGAGGTGCTGCCCAGCACCTCCATGTACT...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp GTAGAAACATACAAAAGGGAGTACGAACACGGAATGTTGAAACGCAGCCCACTAACGACGAGCTCCTGCTaGGCGGCGACGGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VETYKREYEHGMLKRSPLTTSSC*AATAGW
Trigger: CCAGCCTGCCGTCGCCGCCCAGCAGGAGCTCGTCGT...TAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp ACAGGTGCAGCACTGTCAGGGTCACTTGTTAAGGCATTTAGAGATTCAATAAGGACGACGAGCTCCTGCTaGGCGGCGACGGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: TGAALSGSLVKAFRDSIRTTSSC*AATAGW
Trigger: CCAGCCTGCCGTCGCCGCCCAGCAGGAGCTCGTCGT...CCTTATTGAATCTCTAAATGCCTTAACAAGTGACCCTGACAGTGCTGCACCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATGGACCTTGGACTCGGTaGGCTCCAGAGCCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHGPWTR*APEPVP
Trigger: AGGGACAGGCTCTGGAGCCCACCGAGTCCAAGGTCC...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp ACAGGTGCAGCACTGTCAGGGTCACTTGTTAAGGCATTTAGAGATTCAATAAGGAGGGCAAGAGGGGTGTaGGCGCGCGGGAGAGCGAAG +
Preference number: 4 (lower is better)
Translates to: TGAALSGSLVKAFRDSIRRARGV*ARGRAK
Trigger: CTTCGCTCTCCCGCGCGCTCACACCCCTCTTGCCCT...CCTTATTGAATCTCTAAATGCCTTAACAAGTGACCCTGACAGTGCTGCACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR TCA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGCCCCTCCTCCACTTTaGTCAAGGGCCGCTGCATTT +
Preference number: 4 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLAPPPL*SRAAAF
Trigger: AAATGCAGCGGCCCTTGATCAAAGTGGAGGAGGGGC...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTCAGCTGGTGGCTTCCTaGTTTCCGCCCACAGAAGGC +
Preference number: 4 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPQLVAS*FPPTEG
Trigger: GCCTTCTGTGGGCGGAAATCAGGAAGCCACCAGCTG...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAGCTGGTGGCTTCCTaGTTTCCGCCCACAGAAGGC +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHQLVAS*FPPTEG
Trigger: GCCTTCTGTGGGCGGAAATCAGGAAGCCACCAGCTG...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp TCGCTTCTCTCCACCAATGGTCTAATCCCTCTGAATAAGCAGCAGGTCAATCAACGGCACCGTCAGCGTTaGAAAGTGAGCCCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: SLLSTNGLIPLNKQQVNQRHRQR*KVSPGG
Trigger: CCCTCCCGGGCTCACTTTGCAACGCTGACGGTGCCG...TTGATTGACCTGCTGCTTATTCAGAGGGATTAGACCATTGGTGGAGAGAAGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR GCA 90 bp ATGACAGGTGCAGCACTGTCAGGGTCACTTGTTAAGGCATTTAGAGATTCAATACCGGGCTTGCCGGGCTaGCCTCTTCCGCAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: MTGAALSGSLVKAFRDSIPGLPG*PLPQWA
Trigger: AGCCCACTGCGGAAGAGGGCAGCCCGGCAAGCCCGG...TATTGAATCTCTAAATGCCTTAACAAGTGACCCTGACAGTGCTGCACCTGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR GCA 90 bp GTTTGTCTGTGCAGATTTTCATTGGCACAACCACCAGGAATCCTGCAACAATGTAAGCGCCGGCAGTGCTaGCCGGCACCGCTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: VCLCRFSLAQPPGILQQCKRRQC*PAPLRV
Trigger: GACCCTTAGCGGTGCCGGGCAGCACTGCCGGCGCTT...ACATTGTTGCAGGATTCCTGGTGGTTGTGCCAATGAAAATCTGCACAGACAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR GCA 90 bp ATGACAGGTGCAGCACTGTCAGGGTCACTTGTTAAGGCATTTAGAGATTCAATACAGACGACGAGCTCCTaGTGGGCGGCGACGGCAGGC +
Preference number: 4 (lower is better)
Translates to: MTGAALSGSLVKAFRDSIQTTSS*WAATAG
Trigger: GCCTGCCGTCGCCGCCCAGCAGGAGCTCGTCGTCTG...TATTGAATCTCTAAATGCCTTAACAAGTGACCCTGACAGTGCTGCACCTGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR GCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCTCAGCATCTGTGCCTaGAGCAGCCTGGTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHLSICA*SSLVSG
Trigger: CCCACTGACCAGGCTGCTGCAGGCACAGATGCTGAG...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp ATGTTCACACTGAGAGAGCTCTCCCGCCAAGGGGAGGAATCACCTGCTTTAATATGCGATCCCGACTCATaGGAGAGCACAGCCGAGAGG +
Preference number: 4 (lower is better)
Translates to: MFTLRELSRQGEESPALICDPDS*ESTAER
Trigger: CCTCTCGGCTGTGCTCTCCCATGAGTCGGGATCGCA...TATTAAAGCAGGTGATTCCTCCCCTTGGCGGGAGAGCTCTCTCAGTGTGAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATTGCCCTCTTCCGCAGTaGGCTTTGAGTGCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHCPLPQ*ALSAVA
Trigger: CGCCACAGCACTCAAAGCCCACTGCGGAAGAGGGCA...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTATCTTGCGCGCTGAATaGTGGGGCTGGGGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPILRAE*WGWGSL
Trigger: GAGAGACCCCCAGCCCCACCATTCAGCGCGCAAGAT...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp ATGTTCACACTGAGAGAGCTCTCCCGCCAAGGGGAGGAATCACCTGCTTTAATATCTGCGCCGCATAACTaGAACCTGGAGGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: MFTLRELSRQGEESPALISAPHN*NLEGKG
Trigger: GCCCTTCCCCTCCAGGTTCCAGTTATGCGGCGCAGA...TATTAAAGCAGGTGATTCCTCCCCTTGGCGGGAGAGCTCTCTCAGTGTGAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGGCTGGAGGAATGGATaGCTGCTGATGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLGWRNG*LLMLLL
Trigger: CAGCAGCAGCATCAGCAGCCATCCATTCCTCCAGCC...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp CAGAGCTCGCTTCTCTCCACCAATGGTCTAATCCCTCTGAATAAGCAGCAGGTCGGTGGGGGTGGACGGTaGGGACTGCTTGAAGTACAT +
Preference number: 4 (lower is better)
Translates to: QSSLLSTNGLIPLNKQQVGGGGR*GLLEVH
Trigger: ATGTACTTCAAGCAGTCCCCACCGTCCACCCCCACC...GACCTGCTGCTTATTCAGAGGGATTAGACCATTGGTGGAGAGAAGCGAGCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR TCA 90 bp TTTGTCTGTGCAGATTTTCATTGGCACAACCACCAGGAATCCTGCAACAATGTGGGGTATCTTGCGCGCTaGATGGTGGGGCTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: FVCADFHWHNHQESCNNVGYLAR*MVGLGV
Trigger: GACCCCCAGCCCCACCATTCAGCGCGCAAGATACCC...CACATTGTTGCAGGATTCCTGGTGGTTGTGCCAATGAAAATCTGCACAGACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR TCA 90 bp GTAGAAACATACAAAAGGGAGTACGAACACGGAATGTTGAAACGCAGCCCACTAGGGTATCTTGCGCGCTaGATGGTGGGGCTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: VETYKREYEHGMLKRSPLGYLAR*MVGLGV
Trigger: GACCCCCAGCCCCACCATTCAGCGCGCAAGATACCC...TAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGCCCCTCCTCCACTTTaGTCAAGGGCCGCTGCATTT +
Preference number: 4 (lower is better)
Translates to: RIAGQSGQGSGSIKNGLKAPPPL*SRAAAF
Trigger: AAATGCAGCGGCCCTTGATCAAAGTGGAGGAGGGGC...TTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATGCCCCTCCTCCACTTTaGTCAAGGGCCGCTGCATTT +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHAPPPL*SRAAAF
Trigger: AAATGCAGCGGCCCTTGATCAAAGTGGAGGAGGGGC...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTGATCGACAGGGAAGGTaGACACAGCCTCTGCTAGGG +
Preference number: 4 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPDRQGR*TQPLLG
Trigger: CCCTAGCAGAGGCTGTGTTCACCTTCCCTGTCGATC...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp GTAGAAACATACAAAAGGGAGTACGAACACGGAATGTTGAAACGCAGCCCACTACTGTCCCGGAAGGGCTaGGGTGTACAAGCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: VETYKREYEHGMLKRSPLLSRKG*GVQAQR
Trigger: CCGCTGGGCTTGTACACCGCAGCCCTTCCGGGACAG...TAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp CAGAGCTCGCTTCTCTCCACCAATGGTCTAATCCCTCTGAATAAGCAGCAGGTCATCTGGAGGGTATCTTaGGCGCTGAATGGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: QSSLLSTNGLIPLNKQQVIWRVS*ALNGGA
Trigger: AGCCCCACCATTCAGCGCGCAAGATACCCTCCAGAT...GACCTGCTGCTTATTCAGAGGGATTAGACCATTGGTGGAGAGAAGCGAGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR GCA 90 bp CAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGGTGGACGGTGGGGACTaGTTGAAGTACATGGAGGTG +
Preference number: 4 (lower is better)
Translates to: QSGQGSGSIKNGLKVLDGVDGGD*LKYMEV
Trigger: CACCTCCATGTACTTCAAGCAGTCCCCACCGTCCAC...CCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp TCGCTTCTCTCCACCAATGGTCTAATCCCTCTGAATAAGCAGCAGGTCAATCAAGAGCGCGTCTGTGTATaGGGAGCGGAGGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SLLSTNGLIPLNKQQVNQERVCV*GAEEEQ
Trigger: CTGCTCCTCCTCCGCTCCCCATACACAGACGCGCTC...TTGATTGACCTGCTGCTTATTCAGAGGGATTAGACCATTGGTGGAGAGAAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CCA 90 bp ATGACAGGTGCAGCACTGTCAGGGTCACTTGTTAAGGCATTTAGAGATTCAATAGAGGCGGTGAGCGGCTaGTGGGGGATGCTGCGATCC +
Preference number: 4 (lower is better)
Translates to: MTGAALSGSLVKAFRDSIEAVSG*WGMLRS
Trigger: GGATCGCAGCATCCCCCACCAGCCGCTCACCGCCTC...TATTGAATCTCTAAATGCCTTAACAAGTGACCCTGACAGTGCTGCACCTGTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CCA 90 bp TTTGTCTGTGCAGATTTTCATTGGCACAACCACCAGGAATCCTGCAACAATGTGGCTGAATGGTGGGGCTaGGGGTCTCTCCAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: FVCADFHWHNHQESCNNVAEWWG*GSLQRR
Trigger: CCTCCGCTGGAGAGACCCCCAGCCCCACCATTCAGC...CACATTGTTGCAGGATTCCTGGTGGTTGTGCCAATGAAAATCTGCACAGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CCA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGGGGAAGGGCTATATTaGGCTTGGACGCAGGGCATA +
Preference number: 4 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLGEGLY*AWTQGI
Trigger: TATGCCCTGCGTCCAAGCCCAATATAGCCCTTCCCC...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp CAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGGGGGAAGGGCTATATTaGGCTTGGACGCAGGGCATA +
Preference number: 4 (lower is better)
Translates to: QSGQGSGSIKNGLKVLDGGEGLY*AWTQGI
Trigger: TATGCCCTGCGTCCAAGCCCAATATAGCCCTTCCCC...CCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTG
53% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATGGCTGGAGGAATGGATaGCTGCTGATGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHGWRNG*LLMLLL
Trigger: CAGCAGCAGCATCAGCAGCCATCCATTCCTCCAGCC...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp GTAGAAACATACAAAAGGGAGTACGAACACGGAATGTTGAAACGCAGCCCACTAGGCGAGGGCTTGAAGTaGAAGAGCGGGAAGCGCGCG +
Preference number: 4 (lower is better)
Translates to: VETYKREYEHGMLKRSPLGEGLK*KSGKRA
Trigger: CGCGCGCTTCCCGCTCTTCCACTTCAAGCCCTCGCC...TAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTGGCAGCCCGTACGGGTaGCTCTCAAGCGCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSGSPYG*LSSAAA
Trigger: GGCCGCCGCGCTTGAGAGCCACCCGTACGGGCTGCC...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTGCGGCGACGGCAGGCTaGGACTCTCGCCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSAATAG*DSRPAG
Trigger: GCCTGCTGGGCGAGAGTCCCAGCCTGCCGTCGCCGC...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp CACCAGGAATCCTGCAACAATGTGTATGACAGGTGCAGCACTGTCAGGGTCACTTGTAGTCGGGGTTCATaGTCTCCGTGGTGTATTCCG +
Preference number: 4 (lower is better)
Translates to: HQESCNNVYDRCSTVRVTCSRGS*SPWCIP
Trigger: CGGAATACACCACGGAGATCATGAACCCCGACTACA...AGTGACCCTGACAGTGCTGCACCTGTCATACACATTGTTGCAGGATTCCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR TCA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGACACGCAGGAAGGCTTaGGTTCGTAGTTGCTCGAGT +
Preference number: 4 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLTRRKA*VRSCSS
Trigger: ACTCGAGCAACTACGAACTCAAGCCTTCCTGCGTGT...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAAAGGCATGTTCACACTaGGAGAGCTCTCCCGCCAAG +
Preference number: 4 (lower is better)
Translates to: RIAGQSGQGSGSIKNGLKKACSH*ESSPAK
Trigger: CTTGGCGGGAGAGCTCTCTCAGTGTGAACATGCCTT...TTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTAAGGCATGTTCACACTaGGAGAGCTCTCCCGCCAAG +
Preference number: 4 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPKACSH*ESSPAK
Trigger: CTTGGCGGGAGAGCTCTCTCAGTGTGAACATGCCTT...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTATCTGGAGGGTATCTTaGGCGCTGAATGGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPIWRVS*ALNGGA
Trigger: AGCCCCACCATTCAGCGCGCAAGATACCCTCCAGAT...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395097.7
CDS-3UTR GCA 90 bp ATGTTCACACTGAGAGAGCTCTCCCGCCAAGGGGAGGAATCACCTGCTTTAATAGTGGACGGTGGGGACTaGTTGAAGTACATGGAGGTG +
Preference number: 4 (lower is better)
Translates to: MFTLRELSRQGEESPALIVDGGD*LKYMEV
Trigger: CACCTCCATGTACTTCAAGCAGTCCCCACCGTCCAC...TATTAAAGCAGGTGATTCCTCCCCTTGGCGGGAGAGCTCTCTCAGTGTGAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp TCGCTTCTCTCCACCAATGGTCTAATCCCTCTGAATAAGCAGCAGGTCAATCAATGCCCTCTTCCGCAGTaGGCTTTGAGTGCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: SLLSTNGLIPLNKQQVNQCPLPQ*ALSAVA
Trigger: CGCCACAGCACTCAAAGCCCACTGCGGAAGAGGGCA...TTGATTGACCTGCTGCTTATTCAGAGGGATTAGACCATTGGTGGAGAGAAGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATTGCTGCCAAGGTCCATaGTCAGCTTGGTGTAGTCGG +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHCCQGP*SAWCSR
Trigger: CCGACTACACCAAGCTGACCATGGACCTTGGCAGCA...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp AGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAATGCTGCCAAGGTCCATaGTCAGCTTGGTGTAGTCGG +
Preference number: 4 (lower is better)
Translates to: RIAGQSGQGSGSIKNGLKCCQGP*SAWCSR
Trigger: CCGACTACACCAAGCTGACCATGGACCTTGGCAGCA...TTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp GTAGAAACATACAAAAGGGAGTACGAACACGGAATGTTGAAACGCAGCCCACTACTCCGGGCTGGAGGCTaGAGGAATGGATGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VETYKREYEHGMLKRSPLLRAGG*RNGWLL
Trigger: CAGCAGCCATCCATTCCTCCAGCCTCCAGCCCGGAG...TAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp AAGGAAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATGGCAGCCCGTACGGGTaGCTCTCAAGCGCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: KEIKRKFLPCLHHIRTFDGSPYG*LSSAAA
Trigger: GGCCGCCGCGCTTGAGAGCCACCCGTACGGGCTGCC...ATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp CAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGGGGCTATATTGGGCTTaGACGCAGGGCATATCCACA +
Preference number: 4 (lower is better)
Translates to: QSGQGSGSIKNGLKVLDGGLYWA*TQGIST
Trigger: TGTGGATATGCCCTGCGTCCAAGCCCAATATAGCCC...CCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330847.1
ENST00000618101.4
CDS-3UTR TCA 90 bp AGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAATGTAGTCGGGGTTCATaGTCTCCGTGGTGTATTCCG +
Preference number: 4 (lower is better)
Translates to: RIAGQSGQGSGSIKNGLKCSRGS*SPWCIP
Trigger: CGGAATACACCACGGAGATCATGAACCCCGACTACA...TTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATTGTAGTCGGGGTTCATaGTCTCCGTGGTGTATTCCG +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHCSRGS*SPWCIP
Trigger: CGGAATACACCACGGAGATCATGAACCCCGACTACA...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp ATCTTTAAGACACATCCTACCCTGGCGAACAACCCTTGGCTGTTCTTGTTTTTACCTCCACGAAGGTACTaGTGCTGGGCAGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: IFKTHPTLANNPWLFLFLPPRRY*CWAGTW
Trigger: CCACGTCCCTGCCCAGCATCAGTACCTTCGTGGAGG...TAAAAACAAGAACAGCCAAGGGTTGTTCGCCAGGGTAGGATGTGTCTTAAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp CAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGGAAGGTGGAGAGGGCTaGGAAGGTTCCTGTTGTAAT +
Preference number: 4 (lower is better)
Translates to: QSGQGSGSIKNGLKVLDGEGGEG*EGSCCN
Trigger: ATTACAACAGGAACCTTCTCAGCCCTCTCCACCTTC...CCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp CAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGAATCCACGAAGGCACTaGAGTCGATGCAGGACAAGT +
Preference number: 4 (lower is better)
Translates to: QSGQGSGSIKNGLKVLDGNPRRH*SRCRTS
Trigger: ACTTGTCCTGCATCGACTTCAGTGCCTTCGTGGATT...CCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGAATCCACGAAGGCACTaGAGTCGATGCAGGACAAGT +
Preference number: 4 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLNPRRH*SRCRTS
Trigger: ACTTGTCCTGCATCGACTTCAGTGCCTTCGTGGATT...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp CAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGGGAAGAGCTTGTCAATaGTGGAAGGTGGAGACACCA +
Preference number: 4 (lower is better)
Translates to: QSGQGSGSIKNGLKVLDGGRACQ*WKVETP
Trigger: TGGTGTCTCCACCTTCCATCATTGACAAGCTCTTCC...CCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp GTTTGTCTGTGCAGATTTTCATTGGCACAACCACCAGGAATCCTGCAACAATGTAGAGCGAAGTGTGTGTaGGGAGCCTGTGTGCGCGCT +
Preference number: 4 (lower is better)
Translates to: VCLCRFSLAQPPGILQQCRAKCV*GACVRA
Trigger: AGCGCGCACACAGGCTCCGCACACACACTTCGCTCT...ACATTGTTGCAGGATTCCTGGTGGTTGTGCCAATGAAAATCTGCACAGACAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR GCA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTCCGGGCTTGCCGGGCTaGCCTCTTCCGCAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: EALIVVITMEDRRTCYHLPGLPG*PLPQWA
Trigger: AGCCCACTGCGGAAGAGGGCAGCCCGGCAAGCCCGG...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp AAGGCAAAAATTATTTGCTGCAATGGATGCACTGAATTGCTAAATGAAGCGAGAGCGAAGCGCCGGCAGTaGTGCCCGGCACCGCTAAGG +
Preference number: 4 (lower is better)
Translates to: KAKIICCNGCTELLNEARAKRRQ*CPAPLR
Trigger: CCTTAGCGGTGCCGGGCAGCACTGCCGGCGCTTCGC...TCTCGCTTCATTTAGCAATTCAGTGCATCCATTGCAGCAAATAATTTTTGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR GCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCCAAACCTATCCCTTTaGTGCGTAGCAAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHPNLSL*CVASRC
Trigger: GCACCTGCTTGCTACGCAGCAAAGGGATAGGTTTGG...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTGAGGCGGTGAGCGGCTaGTGGGGGATGCTGCGATCC +
Preference number: 4 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSEAVSG*WGMLRS
Trigger: GGATCGCAGCATCCCCCACCAGCCGCTCACCGCCTC...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp ATGACAGGTGCAGCACTGTCAGGGTCACTTGTTAAGGCATTTAGAGATTCAATATTGCGCGCTGAATGGTaGGGCTGGGGGTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: MTGAALSGSLVKAFRDSILRAEW*GWGSLQ
Trigger: CTGGAGAGACCCCCAGCCCCACCATTCAGCGCGCAA...TATTGAATCTCTAAATGCCTTAACAAGTGACCCTGACAGTGCTGCACCTGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CCA 90 bp ATCTTTAAGACACATCCTACCCTGGCGAACAACCCTTGGCTGTTCTTGTTTTTATTGCGCGCTGAATGGTaGGGCTGGGGGTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: IFKTHPTLANNPWLFLFLLRAEW*GWGSLQ
Trigger: CTGGAGAGACCCCCAGCCCCACCATTCAGCGCGCAA...TAAAAACAAGAACAGCCAAGGGTTGTTCGCCAGGGTAGGATGTGTCTTAAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp GTAGAAACATACAAAAGGGAGTACGAACACGGAATGTTGAAACGCAGCCCACTATCTGCGCCGCATAACTaGAACCTGGAGGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: VETYKREYEHGMLKRSPLSAPHN*NLEGKG
Trigger: GCCCTTCCCCTCCAGGTTCCAGTTATGCGGCGCAGA...TAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp GGTGCAGCACTGTCAGGGTCACTTGTTAAGGCATTTAGAGATTCAATAAGGCAATCTGCGCCGCATAACTaGAACCTGGAGGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: GAALSGSLVKAFRDSIRQSAPHN*NLEGKG
Trigger: GCCCTTCCCCTCCAGGTTCCAGTTATGCGGCGCAGA...TTGCCTTATTGAATCTCTAAATGCCTTAACAAGTGACCCTGACAGTGCTGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CCA 90 bp ATCTTTAAGACACATCCTACCCTGGCGAACAACCCTTGGCTGTTCTTGTTTTTACCTCGTCCTCCGGGCTaGAGGCTGGAGGAATGGATG +
Preference number: 4 (lower is better)
Translates to: IFKTHPTLANNPWLFLFLPRPPG*RLEEWM
Trigger: CATCCATTCCTCCAGCCTCCAGCCCGGAGGACGAGG...TAAAAACAAGAACAGCCAAGGGTTGTTCGCCAGGGTAGGATGTGTCTTAAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp GTCACTTTGTCTAGATCACGAGATAAATCTACAAATTGTAGTTTGTCTGTGCAGGGAAGGCCGGCGTGGTaGGGGTGGACGGTGGGGACT +
Preference number: 4 (lower is better)
Translates to: VTLSRSRDKSTNCSLSVQGRPAW*GWTVGT
Trigger: AGTCCCCACCGTCCACCCCCACCACGCCGGCCTTCC...CTGCACAGACAAACTACAATTTGTAGATTTATCTCGTGATCTAGACAAAGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CCA 90 bp AAGGAAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATGGAAGGCCGGCGTGGTaGGGGTGGACGGTGGGGACT +
Preference number: 4 (lower is better)
Translates to: KEIKRKFLPCLHHIRTFDGRPAW*GWTVGT
Trigger: AGTCCCCACCGTCCACCCCCACCACGCCGGCCTTCC...ATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTACGACGAGCTCCTGCTaGGCGGCGACGGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: EALIVVITMEDRRTCYHLTTSSC*AATAGW
Trigger: CCAGCCTGCCGTCGCCGCCCAGCAGGAGCTCGTCGT...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGAGGCAGGCTAAGGCTTaGATATCAAGGTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLRQAKA*ISRFRL
Trigger: GAGCCTGAACCTTGATATCCAAGCCTTAGCCTGCCT...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp ATGTTCACACTGAGAGAGCTCTCCCGCCAAGGGGAGGAATCACCTGCTTTAATAAGACACATCCTACCCTaGCGAACAACCCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: MFTLRELSRQGEESPALIRHILP*RTTLGC
Trigger: ACAGCCAAGGGTTGTTCGCCAGGGTAGGATGTGTCT...TATTAAAGCAGGTGATTCCTCCCCTTGGCGGGAGAGCTCTCTCAGTGTGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR CAA 72 bp CAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTaGGATGGGCCATACCTCAGAAGGGATCGACAGGGA +
Preference number: 4 (lower is better)
Translates to: QGSGSIKNGLKV*DGPYLRRDRQG
Trigger: TCCCTGTCGATCCCTTCTGAGGTATGGCCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp TTTGTCTGTGCAGATTTTCATTGGCACAACCACCAGGAATCCTGCAACAATGTGGCCCCTCCTCCACTTTaGTCAAGGGCCGCTGCATTT +
Preference number: 4 (lower is better)
Translates to: FVCADFHWHNHQESCNNVAPPPL*SRAAAF
Trigger: AAATGCAGCGGCCCTTGATCAAAGTGGAGGAGGGGC...CACATTGTTGCAGGATTCCTGGTGGTTGTGCCAATGAAAATCTGCACAGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR TCA 90 bp ACAGTTACATGTAATCCAGTTTATAATCTGATCCACTTTCAGGATAGCTGGACAGCGGCGGCGAGGGCTTaGAGTGGAAGAGCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: TVTCNPVYNLIHFQDSWTAAARA*SGRAGS
Trigger: GCTTCCCGCTCTTCCACTTCAAGCCCTCGCCGCCGC...TGTCCAGCTATCCTGAAAGTGGATCAGATTATAAACTGGATTACATGTAACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTGCGGCGGCGAGGGCTTaGAGTGGAAGAGCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: EALIVVITMEDRRTCYHLAAARA*SGRAGS
Trigger: GCTTCCCGCTCTTCCACTTCAAGCCCTCGCCGCCGC...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTTCTGCACTGTTCTCTTaGAAAAGCCCTTGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPSALFS*KSPCSP
Trigger: AGGGCTGCAAGGGCTTTTTCAAGAGAACAGTGCAGA...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATAATCCACGAAGGCACTaGAGTCGATGCAGGACAAGT +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHNPRRH*SRCRTS
Trigger: ACTTGTCCTGCATCGACTTCAGTGCCTTCGTGGATT...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGACCCATGTCTTTCTGTaGTCATGCTCAGTGCTGACA +
Preference number: 4 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLTHVFL*SCSVLT
Trigger: TGTCAGCACTGAGCATGATCACAGAAAGACATGGGT...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTGGAAGAGCTTGTCAATaGTGGAAGGTGGAGACACCA +
Preference number: 4 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPGRACQ*WKVETP
Trigger: TGGTGTCTCCACCTTCCATCATTGACAAGCTCTTCC...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGCTTAGAAAACCCTCATaGACTATAACCCCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLLRKPS*TITPSH
Trigger: GTGGGAGGGGGTTATAGTTCATGAGGGTTTTCTAAG...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATGGTGCTTACCCTGTATaGCCAGTTCCTGCTGATTTG +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHGAYPV*PVPADL
Trigger: CAAATCAGCAGGAACTGGTCATACAGGGTAAGCACC...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGGTGCTTACCCTGTATaGCCAGTTCCTGCTGATTTG +
Preference number: 4 (lower is better)
Translates to: RIAGQSGQGSGSIKNGLKGAYPV*PVPADL
Trigger: CAAATCAGCAGGAACTGGTCATACAGGGTAAGCACC...TTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp AAGGAAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATCTCCGCTCTCCCGGCTaGGCGTTCGCTCGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: KEIKRKFLPCLHHIRTFDLRSPG*AFARSL
Trigger: GAGAGAGCGAGCGAACGCGCAGCCGGGAGAGCGGAG...ATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618101.4
CDS-3UTR GCA 90 bp GTAGAAACATACAAAAGGGAGTACGAACACGGAATGTTGAAACGCAGCCCACTATGTGCGGAGCCTGTGTaGGCGCTTGTGTCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: VETYKREYEHGMLKRSPLCAEPV*ALVSVC
Trigger: ACACACAGACACAAGCGCGCACACAGGCTCCGCACA...TAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp AAGGCAAAAATTATTTGCTGCAATGGATGCACTGAATTGCTAAATGAAGCGAGACACCTCCACGGCCACTaGCGGCACCGTCAGCGTTGC +
Preference number: 4 (lower is better)
Translates to: KAKIICCNGCTELLNEARHLHGH*RHRQRC
Trigger: GCAACGCTGACGGTGCCGGCAGTGGCCGTGGAGGTG...TCTCGCTTCATTTAGCAATTCAGTGCATCCATTGCAGCAAATAATTTTTGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR GCA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTCTGTCCCGGAAGGGCTaGGGTGTACAAGCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSLSRKG*GVQAQR
Trigger: CCGCTGGGCTTGTACACCGCAGCCCTTCCGGGACAG...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATTTGATCAAGGGCCGCTaGATTTGGTACACGCAGGAA +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHLIKGR*IWYTQE
Trigger: TTCCTGCGTGTACCAAATGCAGCGGCCCTTGATCAA...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp AGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAATTGATCAAGGGCCGCTaGATTTGGTACACGCAGGAA +
Preference number: 4 (lower is better)
Translates to: RIAGQSGQGSGSIKNGLKLIKGR*IWYTQE
Trigger: TTCCTGCGTGTACCAAATGCAGCGGCCCTTGATCAA...TTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp AAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATACAGCGCACACGGCACACGTaGCCTCGCCAGACGACGAGC +
Preference number: 4 (lower is better)
Translates to: KLKGSFCLVCTTYVPLIQRTRHT*PRQTTS
Trigger: GCTCGTCGTCTGGCGAGGGCACGTGTGCCGTGTGCG...CTGTATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp AAGGAAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATCGCACACGGCACACGTaGCCTCGCCAGACGACGAGC +
Preference number: 4 (lower is better)
Translates to: KEIKRKFLPCLHHIRTFDRTRHT*PRQTTS
Trigger: GCTCGTCGTCTGGCGAGGGCACGTGTGCCGTGTGCG...ATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp CAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGTCCCGGAATCTTTTCTaGCCAGCTTCTGGATACATC +
Preference number: 4 (lower is better)
Translates to: QSGQGSGSIKNGLKVLDGSRNLF*PASGYI
Trigger: GATGTATCCAGAAGCTGGGCAGAAAAGATTCCGGGA...CCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp AAGGCAAAAATTATTTGCTGCAATGGATGCACTGAATTGCTAAATGAAGCGAGAGCGGTGAGCGGCTGGTaGGGGATGCTGCGATCCCGA +
Preference number: 4 (lower is better)
Translates to: KAKIICCNGCTELLNEARAVSGW*GMLRSR
Trigger: TCGGGATCGCAGCATCCCCCACCAGCCGCTCACCGC...TCTCGCTTCATTTAGCAATTCAGTGCATCCATTGCAGCAAATAATTTTTGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CCA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTGCGGTGAGCGGCTGGTaGGGGATGCTGCGATCCCGA +
Preference number: 4 (lower is better)
Translates to: EALIVVITMEDRRTCYHLAVSGW*GMLRSR
Trigger: TCGGGATCGCAGCATCCCCCACCAGCCGCTCACCGC...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp TTTGTCTGTGCAGATTTTCATTGGCACAACCACCAGGAATCCTGCAACAATGTGGACGCAGGGCATATCTaGAGGGTATCTTGCGCGCTG +
Preference number: 4 (lower is better)
Translates to: FVCADFHWHNHQESCNNVDAGHI*RVSCAL
Trigger: CAGCGCGCAAGATACCCTCCAGATATGCCCTGCGTC...CACATTGTTGCAGGATTCCTGGTGGTTGTGCCAATGAAAATCTGCACAGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTCGCATAACTGGAACCTaGAGGGGAAGGGCTATATTG +
Preference number: 4 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPRITGT*RGRAIL
Trigger: CAATATAGCCCTTCCCCTCCAGGTTCCAGTTATGCG...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp TTAAATATTGTAGCCATTTCCACTGTAGGCAGGAGAGAGCCAAAAGCAGGAACCGGCTGGAGGAATGGATaGCTGCTGATGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LNIVAISTVGRREPKAGTGWRNG*LLMLLL
Trigger: CAGCAGCAGCATCAGCAGCCATCCATTCCTCCAGCC...GGTTCCTGCTTTTGGCTCTCTCCTGCCTACAGTGGAAATGGCTACAATATTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CCA 90 bp CAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGATTCATCATGCAGATTaGAGGAGAAGGTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: QSGQGSGSIKNGLKVLDGIHHAD*RRRWRG
Trigger: CCCTCTCCACCTTCTCCTCCAATCTGCATGATGAAT...CCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp CAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGGTCAATGATGGAAGGTaGAGACACCAAGTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: QSGQGSGSIKNGLKVLDGVNDGR*RHQVFQ
Trigger: CTGGAAGACTTGGTGTCTCCACCTTCCATCATTGAC...CCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AAGGCAAAAATTATTTGCTGCAATGGATGCACTGAATTGCTAAATGAAGCGAGAGTCAGCGTTGCAAAGTaGGCCCGGGAGGGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: KAKIICCNGCTELLNEARVSVAK*AREGRP
Trigger: TGGACGCCCCTCCCGGGCTCACTTTGCAACGCTGAC...TCTCGCTTCATTTAGCAATTCAGTGCATCCATTGCAGCAAATAATTTTTGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR TCA 90 bp ACAGTTACATGTAATCCAGTTTATAATCTGATCCACTTTCAGGATAGCTGGACAGTCAGCGTTGCAAAGTaGGCCCGGGAGGGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: TVTCNPVYNLIHFQDSWTVSVAK*AREGRP
Trigger: TGGACGCCCCTCCCGGGCTCACTTTGCAACGCTGAC...TGTCCAGCTATCCTGAAAGTGGATCAGATTATAAACTGGATTACATGTAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATACAGGGGTATCTTGCGCGCTaGATGGTGGGGCTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: KLKGSFCLVCTTYVPLIQGYLAR*MVGLGV
Trigger: GACCCCCAGCCCCACCATTCAGCGCGCAAGATACCC...CTGTATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp TCACTTTGTCTAGATCACGAGATAAATCTACAAATTGTAGTTTGTCTGTGCAGAGCGGCGGCGAGGGCTTaGAGTGGAAGAGCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: SLCLDHEINLQIVVCLCRAAARA*SGRAGS
Trigger: GCTTCCCGCTCTTCCACTTCAAGCCCTCGCCGCCGC...TCTGCACAGACAAACTACAATTTGTAGATTTATCTCGTGATCTAGACAAAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR TCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTACCCATGTCTTTCTGTaGTCATGCTCAGTGCTGACA +
Preference number: 4 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPTHVFL*SCSVLT
Trigger: TGTCAGCACTGAGCATGATCACAGAAAGACATGGGT...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp ATCTTTAAGACACATCCTACCCTGGCGAACAACCCTTGGCTGTTCTTGTTTTTAGATCGACAGGGAAGGTaGACACAGCCTCTGCTAGGG +
Preference number: 4 (lower is better)
Translates to: IFKTHPTLANNPWLFLFLDRQGR*TQPLLG
Trigger: CCCTAGCAGAGGCTGTGTTCACCTTCCCTGTCGATC...TAAAAACAAGAACAGCCAAGGGTTGTTCGCCAGGGTAGGATGTGTCTTAAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTCGGCACCGTCAGCGTTaGAAAGTGAGCCCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: EALIVVITMEDRRTCYHLRHRQR*KVSPGG
Trigger: CCCTCCCGGGCTCACTTTGCAACGCTGACGGTGCCG...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp TTTGTCTGTGCAGATTTTCATTGGCACAACCACCAGGAATCCTGCAACAATGTGGCAGTGGGCTTTGAGTaGTGTGGCGGTTCCGTCTTT +
Preference number: 4 (lower is better)
Translates to: FVCADFHWHNHQESCNNVAVGFE*CGGSVF
Trigger: AAAGACGGAACCGCCACAGCACTCAAAGCCCACTGC...CACATTGTTGCAGGATTCCTGGTGGTTGTGCCAATGAAAATCTGCACAGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR GCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTCAAGGGCATTCATCATaGAGATTGGAGGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPQGHSS*RLEEKV
Trigger: CACCTTCTCCTCCAATCTGCATGATGAATGCCCTTG...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGGGCATTCATCATaGAGATTGGAGGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHQGHSS*RLEEKV
Trigger: CACCTTCTCCTCCAATCTGCATGATGAATGCCCTTG...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp CACCAGGAATCCTGCAACAATGTGTATGACAGGTGCAGCACTGTCAGGGTCACTAACCACCAGGAATCCTaGAACAATGTGTATGACAGG +
Preference number: 4 (lower is better)
Translates to: HQESCNNVYDRCSTVRVTNHQES*NNVYDR
Trigger: CCTGTCATACACATTGTTGCAGGATTCCTGGTGGTT...AGTGACCCTGACAGTGCTGCACCTGTCATACACATTGTTGCAGGATTCCTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR GCA 90 bp ATGTTCACACTGAGAGAGCTCTCCCGCCAAGGGGAGGAATCACCTGCTTTAATATCCCGGAATCTTTTCTaGCCAGCTTCTGGATACATC +
Preference number: 4 (lower is better)
Translates to: MFTLRELSRQGEESPALISRNLF*PASGYI
Trigger: GATGTATCCAGAAGCTGGGCAGAAAAGATTCCGGGA...TATTAAAGCAGGTGATTCCTCCCCTTGGCGGGAGAGCTCTCTCAGTGTGAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTCCTTATTGTCCCTGGTaGTTACCCTGTATGACCAGT +
Preference number: 4 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPPYCPW*LPCMTS
Trigger: ACTGGTCATACAGGGTAAGCACCAGGGACAATAAGG...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp AAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATACAGGCTGAATGGTGGGGCTaGGGGTCTCTCCAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: KLKGSFCLVCTTYVPLIQAEWWG*GSLQRR
Trigger: CCTCCGCTGGAGAGACCCCCAGCCCCACCATTCAGC...CTGTATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTTGCGCGCTGAATGGTaGGGCTGGGGGTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSLRAEW*GWGSLQ
Trigger: CTGGAGAGACCCCCAGCCCCACCATTCAGCGCGCAA...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp ATCTTTAAGACACATCCTACCCTGGCGAACAACCCTTGGCTGTTCTTGTTTTTAGACGCAGGGCATATCTaGAGGGTATCTTGCGCGCTG +
Preference number: 4 (lower is better)
Translates to: IFKTHPTLANNPWLFLFLDAGHI*RVSCAL
Trigger: CAGCGCGCAAGATACCCTCCAGATATGCCCTGCGTC...TAAAAACAAGAACAGCCAAGGGTTGTTCGCCAGGGTAGGATGTGTCTTAAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395097.7
CDS-3UTR CCA 90 bp GTAGAAACATACAAAAGGGAGTACGAACACGGAATGTTGAAACGCAGCCCACTAGGGGAAGGGCTATATTaGGCTTGGACGCAGGGCATA +
Preference number: 4 (lower is better)
Translates to: VETYKREYEHGMLKRSPLGEGLY*AWTQGI
Trigger: TATGCCCTGCGTCCAAGCCCAATATAGCCCTTCCCC...TAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp ACAGGTGCAGCACTGTCAGGGTCACTTGTTAAGGCATTTAGAGATTCAATAAGGGGGGAAGGGCTATATTaGGCTTGGACGCAGGGCATA +
Preference number: 4 (lower is better)
Translates to: TGAALSGSLVKAFRDSIRGEGLY*AWTQGI
Trigger: TATGCCCTGCGTCCAAGCCCAATATAGCCCTTCCCC...CCTTATTGAATCTCTAAATGCCTTAACAAGTGACCCTGACAGTGCTGCACCTGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CCA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTGATGGTGATGGTAGCTaGGCGCCCGCCCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: EALIVVITMEDRRTCYHLDGDGS*APAPPP
Trigger: TGGAGGAGGGGCGGGCGCCCAGCTACCATCACCATC...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp AAGGCAAAAATTATTTGCTGCAATGGATGCACTGAATTGCTAAATGAAGCGAGAGATGGTGATGGTAGCTaGGCGCCCGCCCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: KAKIICCNGCTELLNEARDGDGS*APAPPP
Trigger: TGGAGGAGGGGCGGGCGCCCAGCTACCATCACCATC...TCTCGCTTCATTTAGCAATTCAGTGCATCCATTGCAGCAAATAATTTTTGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CCA 90 bp GTCACTTTGTCTAGATCACGAGATAAATCTACAAATTGTAGTTTGTCTGTGCAGGGCGAGGGCTTGAAGTaGAAGAGCGGGAAGCGCGCG +
Preference number: 4 (lower is better)
Translates to: VTLSRSRDKSTNCSLSVQGEGLK*KSGKRA
Trigger: CGCGCGCTTCCCGCTCTTCCACTTCAAGCCCTCGCC...CTGCACAGACAAACTACAATTTGTAGATTTATCTCGTGATCTAGACAAAGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CCA 90 bp ATGTTCACACTGAGAGAGCTCTCCCGCCAAGGGGAGGAATCACCTGCTTTAATACAGCAGCCTGGTCAGTaGGACAGTATCTGGAATAAT +
Preference number: 4 (lower is better)
Translates to: MFTLRELSRQGEESPALIQQPGQ*DSIWNN
Trigger: ATTATTCCAGATACTGTCCCACTGACCAGGCTGCTG...TATTAAAGCAGGTGATTCCTCCCCTTGGCGGGAGAGCTCTCTCAGTGTGAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGTTCTGGATACATCAATaGAGGCTGTCAGGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLFWIHQ*RLSGGC
Trigger: ACAACCTCCTGACAGCCTCCATTGATGTATCCAGAA...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATTTTCTGCCCAGCTTCTaGATACATCAATGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHFLPSF*IHQWRL
Trigger: CAGCCTCCATTGATGTATCCAGAAGCTGGGCAGAAA...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGCCTGTCCCTTACTCTaGTGGTCTTTTAAACTGCTT +
Preference number: 4 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLACPLL*WSFKLL
Trigger: AAGCAGTTTAAAAGACCACCAGAGTAAGGGACAGGC...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp ACAGTTACATGTAATCCAGTTTATAATCTGATCCACTTTCAGGATAGCTGGACAGGGCACCCAGGACCTTaGACTCGGTGGGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: TVTCNPVYNLIHFQDSWTGHPGP*TRWAPE
Trigger: CTCTGGAGCCCACCGAGTCCAAGGTCCTGGGTGCCC...TGTCCAGCTATCCTGAAAGTGGATCAGATTATAAACTGGATTACATGTAACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp ATGTTCACACTGAGAGAGCTCTCCCGCCAAGGGGAGGAATCACCTGCTTTAATAGTCAATGATGGAAGGTaGAGACACCAAGTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: MFTLRELSRQGEESPALIVNDGR*RHQVFQ
Trigger: CTGGAAGACTTGGTGTCTCCACCTTCCATCATTGAC...TATTAAAGCAGGTGATTCCTCCCCTTGGCGGGAGAGCTCTCTCAGTGTGAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp ATGTTCACACTGAGAGAGCTCTCCCGCCAAGGGGAGGAATCACCTGCTTTAATACCTAAAAGTCTTGGATaGGCCATACCTCAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: MFTLRELSRQGEESPALIPKSLG*AIPQKG
Trigger: TCCCTTCTGAGGTATGGCCCATCCAAGACTTTTAGG...TATTAAAGCAGGTGATTCCTCCCCTTGGCGGGAGAGCTCTCTCAGTGTGAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTCTCTCCAGCGGAGGCTaGGAGTGTAGGAGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: EALIVVITMEDRRTCYHLLSSGG*ECRRSG
Trigger: TCCGCTCCTCCTACACTCTCAGCCTCCGCTGGAGAG...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp GTCACTTTGTCTAGATCACGAGATAAATCTACAAATTGTAGTTTGTCTGTGCAGCCTCCACGAAGGTACTaGTGCTGGGCAGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: VTLSRSRDKSTNCSLSVQPPRRY*CWAGTW
Trigger: CCACGTCCCTGCCCAGCATCAGTACCTTCGTGGAGG...CTGCACAGACAAACTACAATTTGTAGATTTATCTCGTGATCTAGACAAAGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR TCA 90 bp AAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATACAGCCTCCACGAAGGTACTaGTGCTGGGCAGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: KLKGSFCLVCTTYVPLIQPPRRY*CWAGTW
Trigger: CCACGTCCCTGCCCAGCATCAGTACCTTCGTGGAGG...CTGTATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp TTTGTCTGTGCAGATTTTCATTGGCACAACCACCAGGAATCCTGCAACAATGTGACACGCAGGAAGGCTTaGGTTCGTAGTTGCTCGAGT +
Preference number: 4 (lower is better)
Translates to: FVCADFHWHNHQESCNNVTRRKA*VRSCSS
Trigger: ACTCGAGCAACTACGAACTCAAGCCTTCCTGCGTGT...CACATTGTTGCAGGATTCCTGGTGGTTGTGCCAATGAAAATCTGCACAGACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR TCA 90 bp TTTGTCTGTGCAGATTTTCATTGGCACAACCACCAGGAATCCTGCAACAATGTGAAAGCAGGAACCAGGTaGCACAGGCAGGAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: FVCADFHWHNHQESCNNVKAGTR*HRQEVA
Trigger: TGCTACTTCCTGCCTGTGTCACCTGGTTCCTGCTTT...CACATTGTTGCAGGATTCCTGGTGGTTGTGCCAATGAAAATCTGCACAGACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR TCA 90 bp CAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGGAAAACTCTGCTGTCTaGAATAAAAGCAAGGCACTC +
Preference number: 4 (lower is better)
Translates to: QSGQGSGSIKNGLKVLDGENSAV*NKSKAL
Trigger: GAGTGCCTTGCTTTTATTTCAGACAGCAGAGTTTTC...CCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTGCTGGTGGGGGATGCTaGGATCCCGACTCATGGGAG +
Preference number: 4 (lower is better)
Translates to: EALIVVITMEDRRTCYHLAGGGC*DPDSWE
Trigger: CTCCCATGAGTCGGGATCGCAGCATCCCCCACCAGC...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp AGATCACGAGATAAATCTACAAATTGTAGTTTGTCTGTGCAGATTTTCATTGGCCTGTCCCGGAAGGGCTaGGGTGTACAAGCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: RSRDKSTNCSLSVQIFIGLSRKG*GVQAQR
Trigger: CCGCTGGGCTTGTACACCGCAGCCCTTCCGGGACAG...GCCAATGAAAATCTGCACAGACAAACTACAATTTGTAGATTTATCTCGTGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR GCA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTCTCAGCATCTGTGCCTaGAGCAGCCTGGTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSLSICA*SSLVSG
Trigger: CCCACTGACCAGGCTGCTGCAGGCACAGATGCTGAG...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp ACAGTTACATGTAATCCAGTTTATAATCTGATCCACTTTCAGGATAGCTGGACACTCCGGGCTGGAGGCTaGAGGAATGGATGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TVTCNPVYNLIHFQDSWTLRAGG*RNGWLL
Trigger: CAGCAGCCATCCATTCCTCCAGCCTCCAGCCCGGAG...TGTCCAGCTATCCTGAAAGTGGATCAGATTATAAACTGGATTACATGTAACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp AAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATACAGCCTCGTCCTCCGGGCTaGAGGCTGGAGGAATGGATG +
Preference number: 4 (lower is better)
Translates to: KLKGSFCLVCTTYVPLIQPRPPG*RLEEWM
Trigger: CATCCATTCCTCCAGCCTCCAGCCCGGAGGACGAGG...CTGTATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTGCCTGTCCCTTACTCTaGTGGTCTTTTAAACTGCTT +
Preference number: 4 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPACPLL*WSFKLL
Trigger: AAGCAGTTTAAAAGACCACCAGAGTAAGGGACAGGC...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp AAGGAAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATGGACCTTGGACTCGGTaGGCTCCAGAGCCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: KEIKRKFLPCLHHIRTFDGPWTR*APEPVP
Trigger: AGGGACAGGCTCTGGAGCCCACCGAGTCCAAGGTCC...ATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp ATGTTCACACTGAGAGAGCTCTCCCGCCAAGGGGAGGAATCACCTGCTTTAATAAATCCTTATTGTCCCTaGTGCTTACCCTGTATGACC +
Preference number: 4 (lower is better)
Translates to: MFTLRELSRQGEESPALINPYCP*CLPCMT
Trigger: GGTCATACAGGGTAAGCACCAGGGACAATAAGGATT...TATTAAAGCAGGTGATTCCTCCCCTTGGCGGGAGAGCTCTCTCAGTGTGAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp ATCTTTAAGACACATCCTACCCTGGCGAACAACCCTTGGCTGTTCTTGTTTTTAACACGCAGGAAGGCTTaGGTTCGTAGTTGCTCGAGT +
Preference number: 4 (lower is better)
Translates to: IFKTHPTLANNPWLFLFLTRRKA*VRSCSS
Trigger: ACTCGAGCAACTACGAACTCAAGCCTTCCTGCGTGT...TAAAAACAAGAACAGCCAAGGGTTGTTCGCCAGGGTAGGATGTGTCTTAAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp ACAGGTGCAGCACTGTCAGGGTCACTTGTTAAGGCATTTAGAGATTCAATAAGGTCTGCACTGTTCTCTTaGAAAAGCCCTTGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: TGAALSGSLVKAFRDSIRSALFS*KSPCSP
Trigger: AGGGCTGCAAGGGCTTTTTCAAGAGAACAGTGCAGA...CCTTATTGAATCTCTAAATGCCTTAACAAGTGACCCTGACAGTGCTGCACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR TCA 90 bp GTAGAAACATACAAAAGGGAGTACGAACACGGAATGTTGAAACGCAGCCCACTAGAAGGTGGAGAGGGCTaGGAAGGTTCCTGTTGTAAT +
Preference number: 4 (lower is better)
Translates to: VETYKREYEHGMLKRSPLEGGEG*EGSCCN
Trigger: ATTACAACAGGAACCTTCTCAGCCCTCTCCACCTTC...TAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp TTTGTCTGTGCAGATTTTCATTGGCACAACCACCAGGAATCCTGCAACAATGTGCTGCAACAATGTGTATaGCAGGTGCAGCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: FVCADFHWHNHQESCNNVLQQCV*QVQHCQ
Trigger: CTGACAGTGCTGCACCTGTCATACACATTGTTGCAG...CACATTGTTGCAGGATTCCTGGTGGTTGTGCCAATGAAAATCTGCACAGACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR TCA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGTATGGCGCTTCTGAATaGATATACCAGTCAGTTACT +
Preference number: 4 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLYGASE*IYQSVT
Trigger: AGTAACTGACTGGTATATTCATTCAGAAGCGCCATA...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTGACTTATGGCGCTTCTaGATGAATATACCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPDLWRF*MNIPVS
Trigger: ACTGACTGGTATATTCATTCAGAAGCGCCATAAGTC...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp CAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGATGACCAGTTCCTGCTaGTTTGCATGTTCTTATCTA +
Preference number: 4 (lower is better)
Translates to: QSGQGSGSIKNGLKVLDGMTSSC*FACSYL
Trigger: TAGATAAGAACATGCAAATCAGCAGGAACTGGTCAT...CCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTCAGTTTGCTCCTCTATaGATTTTAAGGGGTTGGACT +
Preference number: 4 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPQFAPL*ILRGWT
Trigger: AGTCCAACCCCTTAAAATTCATAGAGGAGCAAACTG...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AAGGAAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATCAGCTGGTGGCTTCCTaGTTTCCGCCCACAGAAGGC +
Preference number: 4 (lower is better)
Translates to: KEIKRKFLPCLHHIRTFDQLVAS*FPPTEG
Trigger: GCCTTCTGTGGGCGGAAATCAGGAAGCCACCAGCTG...ATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATGAAAACTCTGCTGTCTaGAATAAAAGCAAGGCACTC +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHENSAV*NKSKAL
Trigger: GAGTGCCTTGCTTTTATTTCAGACAGCAGAGTTTTC...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTGAAAACTCTGCTGTCTaGAATAAAAGCAAGGCACTC +
Preference number: 4 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPENSAV*NKSKAL
Trigger: GAGTGCCTTGCTTTTATTTCAGACAGCAGAGTTTTC...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTAGAGCGAAGTGTGTGTaGGGAGCCTGTGTGCGCGCT +
Preference number: 4 (lower is better)
Translates to: EALIVVITMEDRRTCYHLRAKCV*GACVRA
Trigger: AGCGCGCACACAGGCTCCGCACACACACTTCGCTCT...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp ACAGGTGCAGCACTGTCAGGGTCACTTGTTAAGGCATTTAGAGATTCAATAAGGTTGATCAAGGGCCGCTaGATTTGGTACACGCAGGAA +
Preference number: 4 (lower is better)
Translates to: TGAALSGSLVKAFRDSIRLIKGR*IWYTQE
Trigger: TTCCTGCGTGTACCAAATGCAGCGGCCCTTGATCAA...CCTTATTGAATCTCTAAATGCCTTAACAAGTGACCCTGACAGTGCTGCACCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR GCA 90 bp CAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGCAGTTCCTGCTGATTTaGATGTTCTTATCTAGGGAT +
Preference number: 4 (lower is better)
Translates to: QSGQGSGSIKNGLKVLDGQFLLI*MFLSRD
Trigger: ATCCCTAGATAAGAACATGCAAATCAGCAGGAACTG...CCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp AAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATACAGGCCTGGAGGGTATCTTaGGCGCTGAATGGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: KLKGSFCLVCTTYVPLIQAWRVS*ALNGGA
Trigger: AGCCCCACCATTCAGCGCGCAAGATACCCTCCAGGC...CTGTATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618101.4
CDS-3UTR CCA 90 bp AAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATACAGATCTTGCGCGCTGAATaGTGGGGCTGGGGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: KLKGSFCLVCTTYVPLIQILRAE*WGWGSL
Trigger: GAGAGACCCCCAGCCCCACCATTCAGCGCGCAAGAT...CTGTATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp GTAGAAACATACAAAAGGGAGTACGAACACGGAATGTTGAAACGCAGCCCACTACGCATAACTGGAACCTaGAGGGGAAGGGCTATATTG +
Preference number: 4 (lower is better)
Translates to: VETYKREYEHGMLKRSPLRITGT*RGRAIL
Trigger: CAATATAGCCCTTCCCCTCCAGGTTCCAGTTATGCG...TAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp ACAGGTGCAGCACTGTCAGGGTCACTTGTTAAGGCATTTAGAGATTCAATAAGGCGCATAACTGGAACCTaGAGGGGAAGGGCTATATTG +
Preference number: 4 (lower is better)
Translates to: TGAALSGSLVKAFRDSIRRITGT*RGRAIL
Trigger: CAATATAGCCCTTCCCCTCCAGGTTCCAGTTATGCG...CCTTATTGAATCTCTAAATGCCTTAACAAGTGACCCTGACAGTGCTGCACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CCA 90 bp AAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATACAGTCTGCGCCGCATAACTaGAACCTGGAGGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: KLKGSFCLVCTTYVPLIQSAPHN*NLEGKG
Trigger: GCCCTTCCCCTCCAGGTTCCAGTTATGCGGCGCAGA...CTGTATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp AAGGAAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATAGTACATGGAGGTGCTaGGCAGCACCTCGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: KEIKRKFLPCLHHIRTFDSTWRC*AAPRPP
Trigger: CGGAGGACGAGGTGCTGCCCAGCACCTCCATGTACT...ATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTAGTACATGGAGGTGCTaGGCAGCACCTCGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: EALIVVITMEDRRTCYHLSTWRC*AAPRPP
Trigger: CGGAGGACGAGGTGCTGCCCAGCACCTCCATGTACT...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTGGTGGGGGTGGACGGTaGGGACTGCTTGAAGTACAT +
Preference number: 4 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSGGGGR*GLLEVH
Trigger: ATGTACTTCAAGCAGTCCCCACCGTCCACCCCCACC...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp TCGCTTCTCTCCACCAATGGTCTAATCCCTCTGAATAAGCAGCAGGTCAATCAAATTCATCATGCAGATTaGAGGAGAAGGTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: SLLSTNGLIPLNKQQVNQIHHAD*RRRWRG
Trigger: CCCTCTCCACCTTCTCCTCCAATCTGCATGATGAAT...TTGATTGACCTGCTGCTTATTCAGAGGGATTAGACCATTGGTGGAGAGAAGCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAGTGGGACAGTATCTaGAATAATCAAGATCTCTGG +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHQWDSI*NNQDLW
Trigger: CCAGAGATCTTGATTATTCCAGATACTGTCCCACTG...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTTGGTTCCATCAAGAATaGCCTAAAAGTCTTGGATGG +
Preference number: 4 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPWFHQE*PKSLGW
Trigger: CCATCCAAGACTTTTAGGCCATTCTTGATGGAACCA...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTAAGGTGATGAGGGCCTaGAGGGTATCTTGCGCGCTG +
Preference number: 4 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSKVMRA*RVSCAL
Trigger: CAGCGCGCAAGATACCCTCCAGGCCCTCATCACCTT...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618101.4
CDS-3UTR TCA 90 bp ATGACAGGTGCAGCACTGTCAGGGTCACTTGTTAAGGCATTTAGAGATTCAATAGAAGGTGGAGAGGGCTaGGAAGGTTCCTGTTGTAAT +
Preference number: 4 (lower is better)
Translates to: MTGAALSGSLVKAFRDSIEGGEG*EGSCCN
Trigger: ATTACAACAGGAACCTTCTCAGCCCTCTCCACCTTC...TATTGAATCTCTAAATGCCTTAACAAGTGACCCTGACAGTGCTGCACCTGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR TCA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGTCAATAAGTAATGTCTaGTCTTCTTTGGGGAGATCA +
Preference number: 4 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLSISNV*SSLGRS
Trigger: TGATCTCCCCAAAGAAGATCAGACATTACTTATTGA...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp CAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGCTTTTAAACTGCTTGTaGTCTTGTTGCATAGCTCTT +
Preference number: 4 (lower is better)
Translates to: QSGQGSGSIKNGLKVLDGLLNCL*SCCIAL
Trigger: AAGAGCTATGCAACAAGATCACAAGCAGTTTAAAAG...CCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAACCACATACGTACCTTTaGTACAGGAAGCATATTTTC +
Preference number: 4 (lower is better)
Translates to: RIAGQSGQGSGSIKNGLKPHTYL*YRKHIF
Trigger: GAAAATATGCTTCCTGTATCAAAGGTACGTATGTGG...TTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTTTGTTTTGCCATGTCTaGTTTGTAGGTAATCCTCCA +
Preference number: 4 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPLFCHV*FVGNPP
Trigger: TGGAGGATTACCTACAAATCAGACATGGCAAAACAA...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp ATGTTCACACTGAGAGAGCTCTCCCGCCAAGGGGAGGAATCACCTGCTTTAATATTGTTTTGCCATGTCTaGTTTGTAGGTAATCCTCCA +
Preference number: 4 (lower is better)
Translates to: MFTLRELSRQGEESPALILFCHV*FVGNPP
Trigger: TGGAGGATTACCTACAAATCAGACATGGCAAAACAA...TATTAAAGCAGGTGATTCCTCCCCTTGGCGGGAGAGCTCTCTCAGTGTGAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGTGTCATTTGCTAACATaGCTGCCTCCTTTTTATTTC +
Preference number: 4 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLCHLLT*LPPFYF
Trigger: GAAATAAAAAGGAGGCAGTCATGTTAGCAAATGACA...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AAGGAAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATGATCGACAGGGAAGGTaGACACAGCCTCTGCTAGGG +
Preference number: 4 (lower is better)
Translates to: KEIKRKFLPCLHHIRTFDDRQGR*TQPLLG
Trigger: CCCTAGCAGAGGCTGTGTTCACCTTCCCTGTCGATC...ATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATGTCAGTTACTATAACTaGAGCAAGTTTAGGGAACTC +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHVSYYN*SKFREL
Trigger: GAGTTCCCTAAACTTGCTTCAGTTATAGTAACTGAC...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCAGTTACTATAACTaGAGCAAGTTTAGGGAACTC +
Preference number: 4 (lower is better)
Translates to: RIAGQSGQGSGSIKNGLKVSYYN*SKFREL
Trigger: GAGTTCCCTAAACTTGCTTCAGTTATAGTAACTGAC...TTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTTATGGCGCTTCTGAATaGATATACCAGTCAGTTACT +
Preference number: 4 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPYGASE*IYQSVT
Trigger: AGTAACTGACTGGTATATTCATTCAGAAGCGCCATA...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATGATCAAATACTCAACTaGCTTATGGCGCTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHDQILN*LMALLN
Trigger: ATTCAGAAGCGCCATAAGTCAGTTGAGTATTTGATC...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATATGACCAGTTCCTGCTaGTTTGCATGTTCTTATCTA +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHMTSSC*FACSYL
Trigger: TAGATAAGAACATGCAAATCAGCAGGAACTGGTCAT...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAATGACCAGTTCCTGCTaGTTTGCATGTTCTTATCTA +
Preference number: 4 (lower is better)
Translates to: RIAGQSGQGSGSIKNGLKMTSSC*FACSYL
Trigger: TAGATAAGAACATGCAAATCAGCAGGAACTGGTCAT...TTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp ATGTTCACACTGAGAGAGCTCTCCCGCCAAGGGGAGGAATCACCTGCTTTAATAGTATCCAAGTCACTGTaGACACCCCATTTAATTACT +
Preference number: 4 (lower is better)
Translates to: MFTLRELSRQGEESPALIVSKSL*TPHLIT
Trigger: AGTAATTAAATGGGGTGTTCACAGTGACTTGGATAC...TATTAAAGCAGGTGATTCCTCCCCTTGGCGGGAGAGCTCTCTCAGTGTGAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTTGTGCGGAGCCTGTGTaGGCGCTTGTGTCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: EALIVVITMEDRRTCYHLCAEPV*ALVSVC
Trigger: ACACACAGACACAAGCGCGCACACAGGCTCCGCACA...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp TTTGTCTGTGCAGATTTTCATTGGCACAACCACCAGGAATCCTGCAACAATGTGAATGTGTATGACAGGTaGAGCACTGTCAGGGTCACT +
Preference number: 4 (lower is better)
Translates to: FVCADFHWHNHQESCNNVNVYDR*STVRVT
Trigger: AGTGACCCTGACAGTGCTGCACCTGTCATACACATT...CACATTGTTGCAGGATTCCTGGTGGTTGTGCCAATGAAAATCTGCACAGACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR GCA 90 bp AGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGCAGGACAAGTCCATTaGAGAACACAAACTTATCTT +
Preference number: 4 (lower is better)
Translates to: RIAGQSGQGSGSIKNGLKAGQVH*RTQTYL
Trigger: AAGATAAGTTTGTGTTCTGCAATGGACTTGTCCTGC...TTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp ATGTTCACACTGAGAGAGCTCTCCCGCCAAGGGGAGGAATCACCTGCTTTAATAGCAGGACAAGTCCATTaGAGAACACAAACTTATCTT +
Preference number: 4 (lower is better)
Translates to: MFTLRELSRQGEESPALIAGQVH*RTQTYL
Trigger: AAGATAAGTTTGTGTTCTGCAATGGACTTGTCCTGC...TATTAAAGCAGGTGATTCCTCCCCTTGGCGGGAGAGCTCTCTCAGTGTGAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAGTTCCTGCTGATTTaGATGTTCTTATCTAGGGAT +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHQFLLI*MFLSRD
Trigger: ATCCCTAGATAAGAACATGCAAATCAGCAGGAACTG...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGAGTGCTAAACAGTACTaGCTTAAAAGTCACTGCAAA +
Preference number: 4 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLSAKQY*LKSHCK
Trigger: TTTGCAGTGACTTTTAAGGCAGTACTGTTTAGCACT...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTAGGGGAGGAATCACCTaGTTTAATACATGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPRGGIT*FNTCCS
Trigger: AGAACAACATGTATTAAAGCAGGTGATTCCTCCCCT...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp ATGTTCACACTGAGAGAGCTCTCCCGCCAAGGGGAGGAATCACCTGCTTTAATAAGGGGAGGAATCACCTaGTTTAATACATGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: MFTLRELSRQGEESPALIRGGIT*FNTCCS
Trigger: AGAACAACATGTATTAAAGCAGGTGATTCCTCCCCT...TATTAAAGCAGGTGATTCCTCCCCTTGGCGGGAGAGCTCTCTCAGTGTGAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp ATCTTTAAGACACATCCTACCCTGGCGAACAACCCTTGGCTGTTCTTGTTTTTACGCATAACTGGAACCTaGAGGGGAAGGGCTATATTG +
Preference number: 4 (lower is better)
Translates to: IFKTHPTLANNPWLFLFLRITGT*RGRAIL
Trigger: CAATATAGCCCTTCCCCTCCAGGTTCCAGTTATGCG...TAAAAACAAGAACAGCCAAGGGTTGTTCGCCAGGGTAGGATGTGTCTTAAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp AAGGAAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATGGCTGGAGGAATGGATaGCTGCTGATGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KEIKRKFLPCLHHIRTFDGWRNG*LLMLLL
Trigger: CAGCAGCAGCATCAGCAGCCATCCATTCCTCCAGCC...ATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp ACAGTTACATGTAATCCAGTTTATAATCTGATCCACTTTCAGGATAGCTGGACAGGTGGGGGTGGACGGTaGGGACTGCTTGAAGTACAT +
Preference number: 4 (lower is better)
Translates to: TVTCNPVYNLIHFQDSWTGGGGR*GLLEVH
Trigger: ATGTACTTCAAGCAGTCCCCACCGTCCACCCCCACC...TGTCCAGCTATCCTGAAAGTGGATCAGATTATAAACTGGATTACATGTAACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp AAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATACAGGGTGGGGGTGGACGGTaGGGACTGCTTGAAGTACAT +
Preference number: 4 (lower is better)
Translates to: KLKGSFCLVCTTYVPLIQGGGGR*GLLEVH
Trigger: ATGTACTTCAAGCAGTCCCCACCGTCCACCCCCACC...CTGTATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp ATCTTTAAGACACATCCTACCCTGGCGAACAACCCTTGGCTGTTCTTGTTTTTAAGGCAGGCTAAGGCTTaGATATCAAGGTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: IFKTHPTLANNPWLFLFLRQAKA*ISRFRL
Trigger: GAGCCTGAACCTTGATATCCAAGCCTTAGCCTGCCT...TAAAAACAAGAACAGCCAAGGGTTGTTCGCCAGGGTAGGATGTGTCTTAAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp GTAGAAACATACAAAAGGGAGTACGAACACGGAATGTTGAAACGCAGCCCACTAGTCAATGATGGAAGGTaGAGACACCAAGTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: VETYKREYEHGMLKRSPLVNDGR*RHQVFQ
Trigger: CTGGAAGACTTGGTGTCTCCACCTTCCATCATTGAC...TAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGCTTTCCAAATACTCATaGTGCACAAGAAGGTTATGT +
Preference number: 4 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLLSKYS*CTRRLC
Trigger: ACATAACCTTCTTGTGCACCATGAGTATTTGGAAAG...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp ATGTTCACACTGAGAGAGCTCTCCCGCCAAGGGGAGGAATCACCTGCTTTAATAGTTGATAAGATGACTTaGGAGGCTCTCATAGTTGTA +
Preference number: 4 (lower is better)
Translates to: MFTLRELSRQGEESPALIVDKMT*EALIVV
Trigger: TACAACTATGAGAGCCTCCCAAGTCATCTTATCAAC...TATTAAAGCAGGTGATTCCTCCCCTTGGCGGGAGAGCTCTCTCAGTGTGAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATGTTGATAAGATGACTTaGGAGGCTCTCATAGTTGTA +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHVDKMT*EALIVV
Trigger: TACAACTATGAGAGCCTCCCAAGTCATCTTATCAAC...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATTCTTCTGTGCTAGTGTaGTCATCCACTCTGTATAAA +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHSSVLV*SSTLYK
Trigger: TTTATACAGAGTGGATGACCACACTAGCACAGAAGA...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTTCTTCTGTGCTAGTGTaGTCATCCACTCTGTATAAA +
Preference number: 4 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPSSVLV*SSTLYK
Trigger: TTTATACAGAGTGGATGACCACACTAGCACAGAAGA...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR CAA 72 bp GGTCTTAGTCTTGATTCTGTTACCAGCTGTTTGACCTaGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: GLSLDSVTSCLT*SNSSPFNGPQF
Trigger: AAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCTGGTAACAGAATCAAGACTAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp TCGCTTCTCTCCACCAATGGTCTAATCCCTCTGAATAAGCAGCAGGTCAATCAATGCTTAGTAATAACTTaGGGCTCACCCAGATGGTTT +
Preference number: 4 (lower is better)
Translates to: SLLSTNGLIPLNKQQVNQCLVIT*GSPRWF
Trigger: AAACCATCTGGGTGAGCCTCAAGTTATTACTAAGCA...TTGATTGACCTGCTGCTTATTCAGAGGGATTAGACCATTGGTGGAGAGAAGCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR TCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTCTTTTAAACTGCTTGTaGTCTTGTTGCATAGCTCTT +
Preference number: 4 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPLLNCL*SCCIAL
Trigger: AAGAGCTATGCAACAAGATCACAAGCAGTTTAAAAG...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTAAGGCATGTTCACACTaGGAGAGCTCTCCCGCCAAG +
Preference number: 4 (lower is better)
Translates to: EALIVVITMEDRRTCYHLKACSH*ESSPAK
Trigger: CTTGGCGGGAGAGCTCTCTCAGTGTGAACATGCCTT...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp TCACTTTGTCTAGATCACGAGATAAATCTACAAATTGTAGTTTGTCTGTGCAGATGTGCGGAGCCTGTGTaGGCGCTTGTGTCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: SLCLDHEINLQIVVCLCRCAEPV*ALVSVC
Trigger: ACACACAGACACAAGCGCGCACACAGGCTCCGCACA...TCTGCACAGACAAACTACAATTTGTAGATTTATCTCGTGATCTAGACAAAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR GCA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTGCAGTGGGCTTTGAGTaGTGTGGCGGTTCCGTCTTT +
Preference number: 4 (lower is better)
Translates to: EALIVVITMEDRRTCYHLAVGFE*CGGSVF
Trigger: AAAGACGGAACCGCCACAGCACTCAAAGCCCACTGC...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp AAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATACAGGTGGACGGTGGGGACTaGTTGAAGTACATGGAGGTG +
Preference number: 4 (lower is better)
Translates to: KLKGSFCLVCTTYVPLIQVDGGD*LKYMEV
Trigger: CACCTCCATGTACTTCAAGCAGTCCCCACCGTCCAC...CTGTATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTTGGGCAGTTTTTATTTaGCAGGCAAACATATTTTGC +
Preference number: 4 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPWAVFI*QANIFC
Trigger: GCAAAATATGTTTGCCTGGCAAATAAAAACTGCCCA...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATTTAAAAGGAAGTTTCTaGCTTGTTTGCACCACATAC +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHLKGSF*LVCTTY
Trigger: GTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAA...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp ATCTTTAAGACACATCCTACCCTGGCGAACAACCCTTGGCTGTTCTTGTTTTTACCTTATTGTCCCTGGTaGTTACCCTGTATGACCAGT +
Preference number: 4 (lower is better)
Translates to: IFKTHPTLANNPWLFLFLPYCPW*LPCMTS
Trigger: ACTGGTCATACAGGGTAAGCACCAGGGACAATAAGG...TAAAAACAAGAACAGCCAAGGGTTGTTCGCCAGGGTAGGATGTGTCTTAAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATAGTGCTAAACAGTACTaGCTTAAAAGTCACTGCAAA +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHSAKQY*LKSHCK
Trigger: TTTGCAGTGACTTTTAAGGCAGTACTGTTTAGCACT...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp GTAGAAACATACAAAAGGGAGTACGAACACGGAATGTTGAAACGCAGCCCACTAGCCTGTCCCTTACTCTaGTGGTCTTTTAAACTGCTT +
Preference number: 4 (lower is better)
Translates to: VETYKREYEHGMLKRSPLACPLL*WSFKLL
Trigger: AAGCAGTTTAAAAGACCACCAGAGTAAGGGACAGGC...TAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp ATCTTTAAGACACATCCTACCCTGGCGAACAACCCTTGGCTGTTCTTGTTTTTACCTAAAAGTCTTGGATaGGCCATACCTCAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: IFKTHPTLANNPWLFLFLPKSLG*AIPQKG
Trigger: TCCCTTCTGAGGTATGGCCCATCCAAGACTTTTAGG...TAAAAACAAGAACAGCCAAGGGTTGTTCGCCAGGGTAGGATGTGTCTTAAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp GTAGAAACATACAAAAGGGAGTACGAACACGGAATGTTGAAACGCAGCCCACTAAATCCTTATTGTCCCTaGTGCTTACCCTGTATGACC +
Preference number: 4 (lower is better)
Translates to: VETYKREYEHGMLKRSPLNPYCP*CLPCMT
Trigger: GGTCATACAGGGTAAGCACCAGGGACAATAAGGATT...TAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCTTTCCAAATACTCATaGTGCACAAGAAGGTTATGT +
Preference number: 4 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHLSKYS*CTRRLC
Trigger: ACATAACCTTCTTGTGCACCATGAGTATTTGGAAAG...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR CAA 72 bp GTAGAAACATACAAAAGGGAGTACGAACACGGAATGTaGAAACGCAGCCCACTAATCCTTCCTAGTACTCAC +
Preference number: 4 (lower is better)
Translates to: VETYKREYEHGM*KRSPLILPSTH
Trigger: GTGAGTACTAGGAAGGATTAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATACAGTGTAGTCGGGGTTCATaGTCTCCGTGGTGTATTCCG +
Preference number: 4 (lower is better)
Translates to: KLKGSFCLVCTTYVPLIQCSRGS*SPWCIP
Trigger: CGGAATACACCACGGAGATCATGAACCCCGACTACA...CTGTATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AAGGAAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATACACGCAGGAAGGCTTaGGTTCGTAGTTGCTCGAGT +
Preference number: 4 (lower is better)
Translates to: KEIKRKFLPCLHHIRTFDTRRKA*VRSCSS
Trigger: ACTCGAGCAACTACGAACTCAAGCCTTCCTGCGTGT...ATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTCTGCACTGTTCTCTTaGAAAAGCCCTTGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSSALFS*KSPCSP
Trigger: AGGGCTGCAAGGGCTTTTTCAAGAGAACAGTGCAGA...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp ACAGGTGCAGCACTGTCAGGGTCACTTGTTAAGGCATTTAGAGATTCAATAAGGCAGGTCAATCAATGCTaGTGCAATTGGATAAACTGC +
Preference number: 4 (lower is better)
Translates to: TGAALSGSLVKAFRDSIRQVNQC*CNWINC
Trigger: GCAGTTTATCCAATTGCATCAGCATTGATTGACCTG...CCTTATTGAATCTCTAAATGCCTTAACAAGTGACCCTGACAGTGCTGCACCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR TCA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTGGAAGAGCTTGTCAATaGTGGAAGGTGGAGACACCA +
Preference number: 4 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSGRACQ*WKVETP
Trigger: TGGTGTCTCCACCTTCCATCATTGACAAGCTCTTCC...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp TCACTTTGTCTAGATCACGAGATAAATCTACAAATTGTAGTTTGTCTGTGCAGAGTGGACGGTGGGGACTaGTTGAAGTACATGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SLCLDHEINLQIVVCLCRVDGGD*LKYMEV
Trigger: CACCTCCATGTACTTCAAGCAGTCCCCACCGTCCAC...TCTGCACAGACAAACTACAATTTGTAGATTTATCTCGTGATCTAGACAAAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR GCA 90 bp ATGTTCACACTGAGAGAGCTCTCCCGCCAAGGGGAGGAATCACCTGCTTTAATAAATCTGATTGAGTCATaGATGTATGGGATGAAATCT +
Preference number: 4 (lower is better)
Translates to: MFTLRELSRQGEESPALINLIES*MYGMKS
Trigger: AGATTTCATCCCATACATGCATGACTCAATCAGATT...TATTAAAGCAGGTGATTCCTCCCCTTGGCGGGAGAGCTCTCTCAGTGTGAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330847.1
ENST00000618101.4
CDS-3UTR GCA 90 bp GTAGAAACATACAAAAGGGAGTACGAACACGGAATGTTGAAACGCAGCCCACTAAGTTTCTGCCTTGTTTaGACCACATACGTACCTTTG +
Preference number: 4 (lower is better)
Translates to: VETYKREYEHGMLKRSPLSFCLV*TTYVPL
Trigger: CAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACT...TAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp TCACTTTGTCTAGATCACGAGATAAATCTACAAATTGTAGTTTGTCTGTGCAGATGCTGCCAAGGTCCATaGTCAGCTTGGTGTAGTCGG +
Preference number: 4 (lower is better)
Translates to: SLCLDHEINLQIVVCLCRCCQGP*SAWCSR
Trigger: CCGACTACACCAAGCTGACCATGGACCTTGGCAGCA...TCTGCACAGACAAACTACAATTTGTAGATTTATCTCGTGATCTAGACAAAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CCA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTGGGCTATATTGGGCTTaGACGCAGGGCATATCCACA +
Preference number: 4 (lower is better)
Translates to: EALIVVITMEDRRTCYHLGLYWA*TQGIST
Trigger: TGTGGATATGCCCTGCGTCCAAGCCCAATATAGCCC...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330847.1
ENST00000618101.4
CDS-3UTR CCA 90 bp ATCTTTAAGACACATCCTACCCTGGCGAACAACCCTTGGCTGTTCTTGTTTTTATTCTGGATACATCAATaGAGGCTGTCAGGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: IFKTHPTLANNPWLFLFLFWIHQ*RLSGGC
Trigger: ACAACCTCCTGACAGCCTCCATTGATGTATCCAGAA...TAAAAACAAGAACAGCCAAGGGTTGTTCGCCAGGGTAGGATGTGTCTTAAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp AAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATACAGAGACACATCCTACCCTaGCGAACAACCCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: KLKGSFCLVCTTYVPLIQRHILP*RTTLGC
Trigger: ACAGCCAAGGGTTGTTCGCCAGGGTAGGATGTGTCT...CTGTATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp AAGGAAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATGTCAGGGCAGGGATCTaGTTCCATCAAGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: KEIKRKFLPCLHHIRTFDVRAGI*FHQEWP
Trigger: AGGCCATTCTTGATGGAACCAGATCCCTGCCCTGAC...ATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR CAA 72 bp AAATTAGGTCTTAGTCTTGATTCTGTTACCAGCTGTTaGACCTTGAGTAACTCTTCACCCTTCAATGGGCCC +
Preference number: 4 (lower is better)
Translates to: KLGLSLDSVTSC*TLSNSSPFNGP
Trigger: GGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCTGGTAACAGAATCAAGACTAAGACCTAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATACAGTCTGCACTGTTCTCTTaGAAAAGCCCTTGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: KLKGSFCLVCTTYVPLIQSALFS*KSPCSP
Trigger: AGGGCTGCAAGGGCTTTTTCAAGAGAACAGTGCAGA...CTGTATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp ACAGTTACATGTAATCCAGTTTATAATCTGATCCACTTTCAGGATAGCTGGACAGAAGGTGGAGAGGGCTaGGAAGGTTCCTGTTGTAAT +
Preference number: 4 (lower is better)
Translates to: TVTCNPVYNLIHFQDSWTEGGEG*EGSCCN
Trigger: ATTACAACAGGAACCTTCTCAGCCCTCTCCACCTTC...TGTCCAGCTATCCTGAAAGTGGATCAGATTATAAACTGGATTACATGTAACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp GTAGAAACATACAAAAGGGAGTACGAACACGGAATGTTGAAACGCAGCCCACTAGATCAAATACTCAACTaGCTTATGGCGCTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: VETYKREYEHGMLKRSPLDQILN*LMALLN
Trigger: ATTCAGAAGCGCCATAAGTCAGTTGAGTATTTGATC...TAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp ATCTTTAAGACACATCCTACCCTGGCGAACAACCCTTGGCTGTTCTTGTTTTTACAGTTTGCTCCTCTATaGATTTTAAGGGGTTGGACT +
Preference number: 4 (lower is better)
Translates to: IFKTHPTLANNPWLFLFLQFAPL*ILRGWT
Trigger: AGTCCAACCCCTTAAAATTCATAGAGGAGCAAACTG...TAAAAACAAGAACAGCCAAGGGTTGTTCGCCAGGGTAGGATGTGTCTTAAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTTTGATCAAGGGCCGCTaGATTTGGTACACGCAGGAA +
Preference number: 4 (lower is better)
Translates to: EALIVVITMEDRRTCYHLLIKGR*IWYTQE
Trigger: TTCCTGCGTGTACCAAATGCAGCGGCCCTTGATCAA...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp TCGCTTCTCTCCACCAATGGTCTAATCCCTCTGAATAAGCAGCAGGTCAATCAAAACTGTCTAACATGGTaGCAGACACAAAATCATTCA +
Preference number: 4 (lower is better)
Translates to: SLLSTNGLIPLNKQQVNQNCLTW*QTQNHS
Trigger: TGAATGATTTTGTGTCTGGCACCATGTTAGACAGTT...TTGATTGACCTGCTGCTTATTCAGAGGGATTAGACCATTGGTGGAGAGAAGCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR GCA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTCCCGGAATCTTTTCTaGCCAGCTTCTGGATACATC +
Preference number: 4 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSSRNLF*PASGYI
Trigger: GATGTATCCAGAAGCTGGGCAGAAAAGATTCCGGGA...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp GTAGAAACATACAAAAGGGAGTACGAACACGGAATGTTGAAACGCAGCCCACTAGCAGGACAAGTCCATTaGAGAACACAAACTTATCTT +
Preference number: 4 (lower is better)
Translates to: VETYKREYEHGMLKRSPLAGQVH*RTQTYL
Trigger: AAGATAAGTTTGTGTTCTGCAATGGACTTGTCCTGC...TAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp GTAGAAACATACAAAAGGGAGTACGAACACGGAATGTTGAAACGCAGCCCACTACAGTTCCTGCTGATTTaGATGTTCTTATCTAGGGAT +
Preference number: 4 (lower is better)
Translates to: VETYKREYEHGMLKRSPLQFLLI*MFLSRD
Trigger: ATCCCTAGATAAGAACATGCAAATCAGCAGGAACTG...TAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp ATCTTTAAGACACATCCTACCCTGGCGAACAACCCTTGGCTGTTCTTGTTTTTACAGTGGGACAGTATCTaGAATAATCAAGATCTCTGG +
Preference number: 4 (lower is better)
Translates to: IFKTHPTLANNPWLFLFLQWDSI*NNQDLW
Trigger: CCAGAGATCTTGATTATTCCAGATACTGTCCCACTG...TAAAAACAAGAACAGCCAAGGGTTGTTCGCCAGGGTAGGATGTGTCTTAAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTCAGCAGCCTGGTCAGTaGGACAGTATCTGGAATAAT +
Preference number: 4 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSQQPGQ*DSIWNN
Trigger: ATTATTCCAGATACTGTCCCACTGACCAGGCTGCTG...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR CAA 72 bp GGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTaGATACAGGAAGCATATTTTCAAGGGACCAATCTT +
Preference number: 4 (lower is better)
Translates to: GSFCLVCTTYVP*IQEAYFQGTNL
Trigger: AAGATTGGTCCCTTGAAAATATGCTTCCTGTATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp GTAGAAACATACAAAAGGGAGTACGAACACGGAATGTTGAAACGCAGCCCACTATGTCATTTGCTAACATaGCTGCCTCCTTTTTATTTC +
Preference number: 4 (lower is better)
Translates to: VETYKREYEHGMLKRSPLCHLLT*LPPFYF
Trigger: GAAATAAAAAGGAGGCAGTCATGTTAGCAAATGACA...TAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp ATCTTTAAGACACATCCTACCCTGGCGAACAACCCTTGGCTGTTCTTGTTTTTAGTCAGTTACTATAACTaGAGCAAGTTTAGGGAACTC +
Preference number: 4 (lower is better)
Translates to: IFKTHPTLANNPWLFLFLVSYYN*SKFREL
Trigger: GAGTTCCCTAAACTTGCTTCAGTTATAGTAACTGAC...TAAAAACAAGAACAGCCAAGGGTTGTTCGCCAGGGTAGGATGTGTCTTAAAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp GTAGAAACATACAAAAGGGAGTACGAACACGGAATGTTGAAACGCAGCCCACTATGGGCAGTTTTTATTTaGCAGGCAAACATATTTTGC +
Preference number: 4 (lower is better)
Translates to: VETYKREYEHGMLKRSPLWAVFI*QANIFC
Trigger: GCAAAATATGTTTGCCTGGCAAATAAAAACTGCCCA...TAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp ACAGTTACATGTAATCCAGTTTATAATCTGATCCACTTTCAGGATAGCTGGACACAAGGGCATTCATCATaGAGATTGGAGGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: TVTCNPVYNLIHFQDSWTQGHSS*RLEEKV
Trigger: CACCTTCTCCTCCAATCTGCATGATGAATGCCCTTG...TGTCCAGCTATCCTGAAAGTGGATCAGATTATAAACTGGATTACATGTAACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp ACAGTTACATGTAATCCAGTTTATAATCTGATCCACTTTCAGGATAGCTGGACACCTTATTGTCCCTGGTaGTTACCCTGTATGACCAGT +
Preference number: 4 (lower is better)
Translates to: TVTCNPVYNLIHFQDSWTPYCPW*LPCMTS
Trigger: ACTGGTCATACAGGGTAAGCACCAGGGACAATAAGG...TGTCCAGCTATCCTGAAAGTGGATCAGATTATAAACTGGATTACATGTAACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp ACAGTTACATGTAATCCAGTTTATAATCTGATCCACTTTCAGGATAGCTGGACAATTCATCATGCAGATTaGAGGAGAAGGTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: TVTCNPVYNLIHFQDSWTIHHAD*RRRWRG
Trigger: CCCTCTCCACCTTCTCCTCCAATCTGCATGATGAAT...TGTCCAGCTATCCTGAAAGTGGATCAGATTATAAACTGGATTACATGTAACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTATTCATCATGCAGATTaGAGGAGAAGGTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: EALIVVITMEDRRTCYHLIHHAD*RRRWRG
Trigger: CCCTCTCCACCTTCTCCTCCAATCTGCATGATGAAT...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp ACAGTTACATGTAATCCAGTTTATAATCTGATCCACTTTCAGGATAGCTGGACACAGCAGCCTGGTCAGTaGGACAGTATCTGGAATAAT +
Preference number: 4 (lower is better)
Translates to: TVTCNPVYNLIHFQDSWTQQPGQ*DSIWNN
Trigger: ATTATTCCAGATACTGTCCCACTGACCAGGCTGCTG...TGTCCAGCTATCCTGAAAGTGGATCAGATTATAAACTGGATTACATGTAACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp ACAGTTACATGTAATCCAGTTTATAATCTGATCCACTTTCAGGATAGCTGGACATTTCTGCCCAGCTTCTaGATACATCAATGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: TVTCNPVYNLIHFQDSWTFLPSF*IHQWRL
Trigger: CAGCCTCCATTGATGTATCCAGAAGCTGGGCAGAAA...TGTCCAGCTATCCTGAAAGTGGATCAGATTATAAACTGGATTACATGTAACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTAATCCTTATTGTCCCTaGTGCTTACCCTGTATGACC +
Preference number: 4 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSNPYCP*CLPCMT
Trigger: GGTCATACAGGGTAAGCACCAGGGACAATAAGGATT...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp ATCTTTAAGACACATCCTACCCTGGCGAACAACCCTTGGCTGTTCTTGTTTTTATCTTCTGTGCTAGTGTaGTCATCCACTCTGTATAAA +
Preference number: 4 (lower is better)
Translates to: IFKTHPTLANNPWLFLFLSSVLV*SSTLYK
Trigger: TTTATACAGAGTGGATGACCACACTAGCACAGAAGA...TAAAAACAAGAACAGCCAAGGGTTGTTCGCCAGGGTAGGATGTGTCTTAAAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp ATCTTTAAGACACATCCTACCCTGGCGAACAACCCTTGGCTGTTCTTGTTTTTAATTTCCAAATCTGATTaGGTCATGCATGTATGGGAT +
Preference number: 4 (lower is better)
Translates to: IFKTHPTLANNPWLFLFLISKSD*VMHVWD
Trigger: ATCCCATACATGCATGACTCAATCAGATTTGGAAAT...TAAAAACAAGAACAGCCAAGGGTTGTTCGCCAGGGTAGGATGTGTCTTAAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330847.1
ENST00000618101.4
CDS-3UTR GCA 90 bp AGATCACGAGATAAATCTACAAATTGTAGTTTGTCTGTGCAGATTTTCATTGGCCAAGGGCATTCATCATaGAGATTGGAGGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: RSRDKSTNCSLSVQIFIGQGHSS*RLEEKV
Trigger: CACCTTCTCCTCCAATCTGCATGATGAATGCCCTTG...GCCAATGAAAATCTGCACAGACAAACTACAATTTGTAGATTTATCTCGTGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR GCA 90 bp TTAAATATTGTAGCCATTTCCACTGTAGGCAGGAGAGAGCCAAAAGCAGGAACCATTTGCTGCAATGGATaGACTGAATTGCTAAATGAA +
Preference number: 4 (lower is better)
Translates to: LNIVAISTVGRREPKAGTICCNG*TELLNE
Trigger: TTCATTTAGCAATTCAGTGCATCCATTGCAGCAAAT...GGTTCCTGCTTTTGGCTCTCTCCTGCCTACAGTGGAAATGGCTACAATATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR GCA 90 bp ACAGGTGCAGCACTGTCAGGGTCACTTGTTAAGGCATTTAGAGATTCAATAAGGGCAAAAATTATTTGCTaGAATGGATGCACTGAATTG +
Preference number: 4 (lower is better)
Translates to: TGAALSGSLVKAFRDSIRAKIIC*NGCTEL
Trigger: CAATTCAGTGCATCCATTGCAGCAAATAATTTTTGC...CCTTATTGAATCTCTAAATGCCTTAACAAGTGACCCTGACAGTGCTGCACCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CCA 90 bp ACAGTTACATGTAATCCAGTTTATAATCTGATCCACTTTCAGGATAGCTGGACATTCTGGATACATCAATaGAGGCTGTCAGGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: TVTCNPVYNLIHFQDSWTFWIHQ*RLSGGC
Trigger: ACAACCTCCTGACAGCCTCCATTGATGTATCCAGAA...TGTCCAGCTATCCTGAAAGTGGATCAGATTATAAACTGGATTACATGTAACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp AAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATACAGTCAGCTTCCAGGAGCTaGTGGTCTTGCAATAAATAC +
Preference number: 4 (lower is better)
Translates to: KLKGSFCLVCTTYVPLIQSASRS*WSCNKY
Trigger: GTATTTATTGCAAGACCACCAGCTCCTGGAAGCTGA...CTGTATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTTCAGCTTCCAGGAGCTaGTGGTCTTGCAATAAATAC +
Preference number: 4 (lower is better)
Translates to: EALIVVITMEDRRTCYHLSASRS*WSCNKY
Trigger: GTATTTATTGCAAGACCACCAGCTCCTGGAAGCTGA...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTCCACATTTCCAAATCTaGTTGAGTCATGCATGTATG +
Preference number: 4 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSPHFQI*LSHACM
Trigger: CATACATGCATGACTCAATCAGATTTGGAAATGTGG...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330847.1
ENST00000618101.4
CDS-3UTR TCA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTGACTTATGGCGCTTCTaGATGAATATACCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: EALIVVITMEDRRTCYHLDLWRF*MNIPVS
Trigger: ACTGACTGGTATATTCATTCAGAAGCGCCATAAGTC...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AAGGAAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATGACTTATGGCGCTTCTaGATGAATATACCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: KEIKRKFLPCLHHIRTFDDLWRF*MNIPVS
Trigger: ACTGACTGGTATATTCATTCAGAAGCGCCATAAGTC...ATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTGATCAAATACTCAACTaGCTTATGGCGCTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSDQILN*LMALLN
Trigger: ATTCAGAAGCGCCATAAGTCAGTTGAGTATTTGATC...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp AAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATACAGAGTTTCTGCCTTGTTTaGACCACATACGTACCTTTG +
Preference number: 4 (lower is better)
Translates to: KLKGSFCLVCTTYVPLIQSFCLV*TTYVPL
Trigger: CAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACT...CTGTATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp TCACTTTGTCTAGATCACGAGATAAATCTACAAATTGTAGTTTGTCTGTGCAGATGTGCAGATTTTCATTaGCACAACCACCAGGAATCC +
Preference number: 4 (lower is better)
Translates to: SLCLDHEINLQIVVCLCRCADFH*HNHQES
Trigger: GGATTCCTGGTGGTTGTGCCAATGAAAATCTGCACA...TCTGCACAGACAAACTACAATTTGTAGATTTATCTCGTGATCTAGACAAAGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CCA 90 bp AAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATACAGTGGTTCCATCAAGAATaGCCTAAAAGTCTTGGATGG +
Preference number: 4 (lower is better)
Translates to: KLKGSFCLVCTTYVPLIQWFHQE*PKSLGW
Trigger: CCATCCAAGACTTTTAGGCCATTCTTGATGGAACCA...CTGTATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp ACAGTTACATGTAATCCAGTTTATAATCTGATCCACTTTCAGGATAGCTGGACATGGTTCCATCAAGAATaGCCTAAAAGTCTTGGATGG +
Preference number: 4 (lower is better)
Translates to: TVTCNPVYNLIHFQDSWTWFHQE*PKSLGW
Trigger: CCATCCAAGACTTTTAGGCCATTCTTGATGGAACCA...TGTCCAGCTATCCTGAAAGTGGATCAGATTATAAACTGGATTACATGTAACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
3UTR CAA 72 bp AATCTACAAATTGTAGTTTGTCTGTGCAGATTTTCATaGGCACAACCACCAGGAATCCTGCAACAATGTGTA +
Preference number: 4 (lower is better)
Translates to: NLQIVVCLCRFS*AQPPGILQQCV
Trigger: TACACATTGTTGCAGGATTCCTGGTGGTTGTGCCAATGAAAATCTGCACAGACAAACTACAATTTGTAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
3UTR CAA 72 bp TTGTCTAGATCACGAGATAAATCTACAAATTGTAGTTaGTCTGTGCAGATTTTCATTGGCACAACCACCAGG +
Preference number: 4 (lower is better)
Translates to: LSRSRDKSTNCS*SVQIFIGTTTR
Trigger: CCTGGTGGTTGTGCCAATGAAAATCTGCACAGACAAACTACAATTTGTAGATTTATCTCGTGATCTAGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR TCA 90 bp AAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATACAGCCACATTTCCAAATCTaGTTGAGTCATGCATGTATG +
Preference number: 4 (lower is better)
Translates to: KLKGSFCLVCTTYVPLIQPHFQI*LSHACM
Trigger: CATACATGCATGACTCAATCAGATTTGGAAATGTGG...CTGTATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330847.1
ENST00000618101.4
CDS-3UTR TCA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTCAATAAGTAATGTCTaGTCTTCTTTGGGGAGATCA +
Preference number: 4 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSSISNV*SSLGRS
Trigger: TGATCTCCCCAAAGAAGATCAGACATTACTTATTGA...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp ACAGTTACATGTAATCCAGTTTATAATCTGATCCACTTTCAGGATAGCTGGACATTGTTTTGCCATGTCTaGTTTGTAGGTAATCCTCCA +
Preference number: 4 (lower is better)
Translates to: TVTCNPVYNLIHFQDSWTLFCHV*FVGNPP
Trigger: TGGAGGATTACCTACAAATCAGACATGGCAAAACAA...TGTCCAGCTATCCTGAAAGTGGATCAGATTATAAACTGGATTACATGTAACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTTATGGCGCTTCTGAATaGATATACCAGTCAGTTACT +
Preference number: 4 (lower is better)
Translates to: EALIVVITMEDRRTCYHLYGASE*IYQSVT
Trigger: AGTAACTGACTGGTATATTCATTCAGAAGCGCCATA...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp AAGGAAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATGTATCCAAGTCACTGTaGACACCCCATTTAATTACT +
Preference number: 4 (lower is better)
Translates to: KEIKRKFLPCLHHIRTFDVSKSL*TPHLIT
Trigger: AGTAATTAAATGGGGTGTTCACAGTGACTTGGATAC...ATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp ACAGTTACATGTAATCCAGTTTATAATCTGATCCACTTTCAGGATAGCTGGACAGTATCCAAGTCACTGTaGACACCCCATTTAATTACT +
Preference number: 4 (lower is better)
Translates to: TVTCNPVYNLIHFQDSWTVSKSL*TPHLIT
Trigger: AGTAATTAAATGGGGTGTTCACAGTGACTTGGATAC...TGTCCAGCTATCCTGAAAGTGGATCAGATTATAAACTGGATTACATGTAACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTAGGGGAGGAATCACCTaGTTTAATACATGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: EALIVVITMEDRRTCYHLRGGIT*FNTCCS
Trigger: AGAACAACATGTATTAAAGCAGGTGATTCCTCCCCT...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp AAGGAAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATGTTGATAAGATGACTTaGGAGGCTCTCATAGTTGTA +
Preference number: 4 (lower is better)
Translates to: KEIKRKFLPCLHHIRTFDVDKMT*EALIVV
Trigger: TACAACTATGAGAGCCTCCCAAGTCATCTTATCAAC...ATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTATTTCCAAATCTGATTaGGTCATGCATGTATGGGAT +
Preference number: 4 (lower is better)
Translates to: EALIVVITMEDRRTCYHLISKSD*VMHVWD
Trigger: ATCCCATACATGCATGACTCAATCAGATTTGGAAAT...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330847.1
ENST00000618101.4
CDS-3UTR TCA 90 bp AAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATACAGTCAATAAGTAATGTCTaGTCTTCTTTGGGGAGATCA +
Preference number: 4 (lower is better)
Translates to: KLKGSFCLVCTTYVPLIQSISNV*SSLGRS
Trigger: TGATCTCCCCAAAGAAGATCAGACATTACTTATTGA...CTGTATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp ACAGTTACATGTAATCCAGTTTATAATCTGATCCACTTTCAGGATAGCTGGACACTTTTAAACTGCTTGTaGTCTTGTTGCATAGCTCTT +
Preference number: 4 (lower is better)
Translates to: TVTCNPVYNLIHFQDSWTLLNCL*SCCIAL
Trigger: AAGAGCTATGCAACAAGATCACAAGCAGTTTAAAAG...TGTCCAGCTATCCTGAAAGTGGATCAGATTATAAACTGGATTACATGTAACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR TCA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTTGTCATTTGCTAACATaGCTGCCTCCTTTTTATTTC +
Preference number: 4 (lower is better)
Translates to: EALIVVITMEDRRTCYHLCHLLT*LPPFYF
Trigger: GAAATAAAAAGGAGGCAGTCATGTTAGCAAATGACA...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp ACAGTTACATGTAATCCAGTTTATAATCTGATCCACTTTCAGGATAGCTGGACATGGGCAGTTTTTATTTaGCAGGCAAACATATTTTGC +
Preference number: 4 (lower is better)
Translates to: TVTCNPVYNLIHFQDSWTWAVFI*QANIFC
Trigger: GCAAAATATGTTTGCCTGGCAAATAAAAACTGCCCA...TGTCCAGCTATCCTGAAAGTGGATCAGATTATAAACTGGATTACATGTAACTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp AAGGCAAAAATTATTTGCTGCAATGGATGCACTGAATTGCTAAATGAAGCGAGATGGGCAGTTTTTATTTaGCAGGCAAACATATTTTGC +
Preference number: 4 (lower is better)
Translates to: KAKIICCNGCTELLNEARWAVFI*QANIFC
Trigger: GCAAAATATGTTTGCCTGGCAAATAAAAACTGCCCA...TCTCGCTTCATTTAGCAATTCAGTGCATCCATTGCAGCAAATAATTTTTGCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR GCA 90 bp ACAGTTACATGTAATCCAGTTTATAATCTGATCCACTTTCAGGATAGCTGGACATTAAAAGGAAGTTTCTaGCTTGTTTGCACCACATAC +
Preference number: 4 (lower is better)
Translates to: TVTCNPVYNLIHFQDSWTLKGSF*LVCTTY
Trigger: GTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAA...TGTCCAGCTATCCTGAAAGTGGATCAGATTATAAACTGGATTACATGTAACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTCAAAGCAACTATAATTaGATTCCCCAGAAAGAGTTT +
Preference number: 4 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSQSNYN*IPQKEF
Trigger: AAACTCTTTCTGGGGAATCCAATTATAGTTGCTTTG...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CCA 90 bp AAGGAAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATCTTTCCAAATACTCATaGTGCACAAGAAGGTTATGT +
Preference number: 4 (lower is better)
Translates to: KEIKRKFLPCLHHIRTFDLSKYS*CTRRLC
Trigger: ACATAACCTTCTTGTGCACCATGAGTATTTGGAAAG...ATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTTCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR GCA 90 bp AAGGCAAAAATTATTTGCTGCAATGGATGCACTGAATTGCTAAATGAAGCGAGAATTGTAGTTTGTCTGTaGAGATTTTCATTGGCACAA +
Preference number: 4 (lower is better)
Translates to: KAKIICCNGCTELLNEARIVVCL*RFSLAQ
Trigger: TTGTGCCAATGAAAATCTGCACAGACAAACTACAAT...TCTCGCTTCATTTAGCAATTCAGTGCATCCATTGCAGCAAATAATTTTTGCCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR GCA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTAATCTGATTGAGTCATaGATGTATGGGATGAAATCT +
Preference number: 4 (lower is better)
Translates to: EALIVVITMEDRRTCYHLNLIES*MYGMKS
Trigger: AGATTTCATCCCATACATGCATGACTCAATCAGATT...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330847.1
ENST00000618101.4
CDS GCA 90 bp GTACGGGTGGCTCTCAAGCGCGGCGGCCTGGCTGCCCGCGGCGGCTaGGGCTCCCAGCGGCAGGCTGAGCGCGGCAGCGGCCGTCGGGTC +
Preference number: 5 (lower is better)
Translates to: VRVALKRGGLAARGG*GSQRQAERGSGRRV
Trigger: GACCCGACGGCCGCTGCCGCGCTCAGCCTGCCGCTGGGAGCCGCAGCCGCCGCGGGCAGCCAGGCCGCCGCGCTTGAGAGCCACCCGTAC
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330847.1
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS GCA 90 bp TGGGGACCGCCTTCATCGGCGGGTCCAGCAGCGGGCCGGGTGCGATaGAGCCGGGCGCCGAGGGCAGTGCCTCGTCCCATAACGCCCCCG +
Preference number: 5 (lower is better)
Translates to: WGPPSSAGPAAGRVR*SRAPRAVPRPITPP
Trigger: CGGGGGCGTTATGGGACGAGGCACTGCCCTCGGCGCCCGGCTGCATCGCACCCGGCCCGCTGCTGGACCCGCCGATGAAGGCGGTCCCCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330847.1
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS TCA 90 bp GTTCCCACCTCCACGGCCACTGCCGGCACCGTCAGCGTTGCAAAGTaGGCCCGGGAGGGGCGTCCAGCTGCGGCGCCGCGCTGCACCGGC +
Preference number: 5 (lower is better)
Translates to: VPTSTATAGTVSVAK*AREGRPAAAPRCTG
Trigger: GCCGGTGCAGCGCGGCGCCGCAGCTGGACGCCCCTCCCGGGCTCACTTTGCAACGCTGACGGTGCCGGCAGTGGCCGTGGAGGTGGGAAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS GCA 90 bp CGCCGCTGTTCCCACCTCCACGGCCACTGCCGGCACCGTCAGCGTTaGAAAGTGAGCCCGGGAGGGGCGTCCAGCTGCGGCGCCGCGCTG +
Preference number: 5 (lower is better)
Translates to: RRCSHLHGHCRHRQR*KVSPGGASSCGAAL
Trigger: CAGCGCGGCGCCGCAGCTGGACGCCCCTCCCGGGCTCACTTTGCAACGCTGACGGTGCCGGCAGTGGCCGTGGAGGTGGGAACAGCGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS CCA 90 bp CCCCGCACACGGCACACGTGCCCTCGCCAGACGACGAGCTCCTGCTaGGCGGCGACGGCAGGCTGGGACTCTCGCCCAGCAGGCTGGACG +
Preference number: 5 (lower is better)
Translates to: PRTRHTCPRQTTSSC*AATAGWDSRPAGWT
Trigger: CGTCCAGCCTGCTGGGCGAGAGTCCCAGCCTGCCGTCGCCGCCCAGCAGGAGCTCGTCGTCTGGCGAGGGCACGTGTGCCGTGTGCGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330847.1
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS GCA 90 bp CGGCACCGTCAGCGTTGCAAAGTGAGCCCGGGAGGGGCGTCCAGCTaGGGCGCCGCGCTGCACCGGCAAGGGCTCAGGGCAAGAGGGGTG +
Preference number: 5 (lower is better)
Translates to: RHRQRCKVSPGGASS*GAALHRQGLRARGV
Trigger: CACCCCTCTTGCCCTGAGCCCTTGCCGGTGCAGCGCGGCGCCGCAGCTGGACGCCCCTCCCGGGCTCACTTTGCAACGCTGACGGTGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS GCA 90 bp TGTCCCCGCACACGGCACACGTGCCCTCGCCAGACGACGAGCTCCTaGTGGGCGGCGACGGCAGGCTGGGACTCTCGCCCAGCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: CPRTRHTCPRQTTSS*WAATAGWDSRPAGW
Trigger: CCAGCCTGCTGGGCGAGAGTCCCAGCCTGCCGTCGCCGCCCAGCAGGAGCTCGTCGTCTGGCGAGGGCACGTGTGCCGTGTGCGGGGACA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330847.1
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS TCA 90 bp TCTTGCGCGCTGAATGGTGGGGCTGGGGGTCTCTCCAGCGGAGGCTaGGAGTGTAGGAGGAGCGGACGTCCGGCGAGGCGAAGCGCCGGC +
Preference number: 5 (lower is better)
Translates to: SCALNGGAGGLSSGG*ECRRSGRPARRSAG
Trigger: GCCGGCGCTTCGCCTCGCCGGACGTCCGCTCCTCCTACACTCTCAGCCTCCGCTGGAGAGACCCCCAGCCCCACCATTCAGCGCGCAAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS GCA 90 bp CCGGCACCGCTAAGGGTCCAGGCTCAGGGCCCGGGCTTGCCGGGCTaGCCTCTTCCGCAGTGGGCTTTGAGTGCTGTGGCGGTTCCGTCT +
Preference number: 5 (lower is better)
Translates to: PAPLRVQAQGPGLPG*PLPQWALSAVAVPS
Trigger: AGACGGAACCGCCACAGCACTCAAAGCCCACTGCGGAAGAGGGCAGCCCGGCAAGCCCGGGCCCTGAGCCTGGACCCTTAGCGGTGCCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS CCA 90 bp GGCTGCGGTGTACAAGCCCAGCGGCTCCCGGAGGCGGTGAGCGGCTaGTGGGGGATGCTGCGATCCCGACTCATGGGAGAGCACAGCCGA +
Preference number: 5 (lower is better)
Translates to: GCGVQAQRLPEAVSG*WGMLRSRLMGEHSR
Trigger: TCGGCTGTGCTCTCCCATGAGTCGGGATCGCAGCATCCCCCACCAGCCGCTCACCGCCTCCGGGAGCCGCTGGGCTTGTACACCGCAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS CCA 90 bp GCTGGGCAGCACCTCGTCCTCCGGGCTGGAGGCTGGAGGAATGGATaGCTGCTGATGCTGCTGCTGGTGATGGTGGTGGTGGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: AGQHLVLRAGGWRNG*LLMLLLVMVVVVVV
Trigger: CACCACCACCACCACCACCATCACCAGCAGCAGCATCAGCAGCCATCCATTCCTCCAGCCTCCAGCCCGGAGGACGAGGTGCTGCCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330847.1
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS CCA 90 bp AGGTGCTGGGCAGCACCTCGTCCTCCGGGCTGGAGGCTGGAGGAATaGATGGCTGCTGATGCTGCTGCTGGTGATGGTGGTGGTGGTGGT +
Preference number: 5 (lower is better)
Translates to: RCWAAPRPPGWRLEE*MAADAAAGDGGGGG
Trigger: ACCACCACCACCACCATCACCAGCAGCAGCATCAGCAGCCATCCATTCCTCCAGCCTCCAGCCCGGAGGACGAGGTGCTGCCCAGCACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330847.1
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTGCTCAGGGCCCGGGCTaGCCGGGCTGCCCTCTTCCG +
Preference number: 5 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPAQGPG*PGCPLP
Trigger: CGGAAGAGGGCAGCCCGGCAAGCCCGGGCCCTGAGC...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATAGCGGGGCCGCCCTCTaGGCCAGCGGCAGCCCGTAC +
Preference number: 5 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHSGAAL*ASGSPY
Trigger: GTACGGGCTGCCGCTGGCCAAGAGGGCGGCCCCGCT...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp ATGTTCACACTGAGAGAGCTCTCCCGCCAAGGGGAGGAATCACCTGCTTTAATAAGCGGGGCCGCCCTCTaGGCCAGCGGCAGCCCGTAC +
Preference number: 5 (lower is better)
Translates to: MFTLRELSRQGEESPALISGAAL*ASGSPY
Trigger: GTACGGGCTGCCGCTGGCCAAGAGGGCGGCCCCGCT...TATTAAAGCAGGTGATTCCTCCCCTTGGCGGGAGAGCTCTCTCAGTGTGAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS CCA 90 bp CCAGGGTGCAGATCTTCCTCAGTTCTACCAGGGCACCCAGGACCTTaGACTCGGTGGGCTCCAGAGCCTGTCCCTTACTCTGGTGGTCTT +
Preference number: 5 (lower is better)
Translates to: PGCRSSSVLPGHPGP*TRWAPEPVPYSGGL
Trigger: AAGACCACCAGAGTAAGGGACAGGCTCTGGAGCCCACCGAGTCCAAGGTCCTGGGTGCCCTGGTAGAACTGAGGAAGATCTGCACCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp CAGAGCTCGCTTCTCTCCACCAATGGTCTAATCCCTCTGAATAAGCAGCAGGTCCCGGCACCGTCAGCGTaGCAAAGTGAGCCCGGGAGG +
Preference number: 5 (lower is better)
Translates to: QSSLLSTNGLIPLNKQQVPAPSA*QSEPGR
Trigger: CCTCCCGGGCTCACTTTGCAACGCTGACGGTGCCGG...GACCTGCTGCTTATTCAGAGGGATTAGACCATTGGTGGAGAGAAGCGAGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CAA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCCGGCACCGTCAGCGTaGCAAAGTGAGCCCGGGAGG +
Preference number: 5 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHPAPSA*QSEPGR
Trigger: CCTCCCGGGCTCACTTTGCAACGCTGACGGTGCCGG...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp TTAAATATTGTAGCCATTTCCACTGTAGGCAGGAGAGAGCCAAAAGCAGGAACCAGCGGGGCCGCCCTCTaGGCCAGCGGCAGCCCGTAC +
Preference number: 5 (lower is better)
Translates to: LNIVAISTVGRREPKAGTSGAAL*ASGSPY
Trigger: GTACGGGCTGCCGCTGGCCAAGAGGGCGGCCCCGCT...GGTTCCTGCTTTTGGCTCTCTCCTGCCTACAGTGGAAATGGCTACAATATTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CAA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGAGGGCACCCAGGACCTaGGACTCGGTGGGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLRAPRT*DSVGSR
Trigger: TCTGGAGCCCACCGAGTCCAAGGTCCTGGGTGCCCT...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS CCA 90 bp CGTGGTGTATTCCGAGCTGTATGTCTGCGCCGCATAACTGGAACCTaGAGGGGAAGGGCTATATTGGGCTTGGACGCAGGGCATATCCAC +
Preference number: 5 (lower is better)
Translates to: RGVFRAVCLRRITGT*RGRAILGLDAGHIH
Trigger: GTGGATATGCCCTGCGTCCAAGCCCAATATAGCCCTTCCCCTCCAGGTTCCAGTTATGCGGCGCAGACATACAGCTCGGAATACACCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330847.1
ENST00000618101.4
CDS-3UTR CAA 90 bp CAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGCTTCCGCAGTGGGCTTaGAGTGCTGTGGCGGTTCCG +
Preference number: 5 (lower is better)
Translates to: QSGQGSGSIKNGLKVLDGLPQWA*SAVAVP
Trigger: CGGAACCGCCACAGCACTCAAAGCCCACTGCGGAAG...CCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp ATCTTTAAGACACATCCTACCCTGGCGAACAACCCTTGGCTGTTCTTGTTTTTAGCTCAGGGCCCGGGCTaGCCGGGCTGCCCTCTTCCG +
Preference number: 5 (lower is better)
Translates to: IFKTHPTLANNPWLFLFLAQGPG*PGCPLP
Trigger: CGGAAGAGGGCAGCCCGGCAAGCCCGGGCCCTGAGC...TAAAAACAAGAACAGCCAAGGGTTGTTCGCCAGGGTAGGATGTGTCTTAAAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATTGCGGCGGCGAGGGCTaGAAGTGGAAGAGCGGGAAG +
Preference number: 5 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHCGGEG*KWKSGK
Trigger: CTTCCCGCTCTTCCACTTCAAGCCCTCGCCGCCGCA...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp ATCTTTAAGACACATCCTACCCTGGCGAACAACCCTTGGCTGTTCTTGTTTTTAAGCGGGGCCGCCCTCTaGGCCAGCGGCAGCCCGTAC +
Preference number: 5 (lower is better)
Translates to: IFKTHPTLANNPWLFLFLSGAAL*ASGSPY
Trigger: GTACGGGCTGCCGCTGGCCAAGAGGGCGGCCCCGCT...TAAAAACAAGAACAGCCAAGGGTTGTTCGCCAGGGTAGGATGTGTCTTAAAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTAGGGCACCCAGGACCTaGGACTCGGTGGGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPRAPRT*DSVGSR
Trigger: TCTGGAGCCCACCGAGTCCAAGGTCCTGGGTGCCCT...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTGGCCTGGAGGGTATCTaGCGCGCTGAATGGTGGGGC +
Preference number: 5 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPGLEGI*RAEWWG
Trigger: GCCCCACCATTCAGCGCGCAAGATACCCTCCAGGCC...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618101.4
CDS TCA 90 bp CAGTGCTGCCAAGGTCCATGGTCAGCTTGGTGTAGTCGGGGTTCATaGTCTCCGTGGTGTATTCCGAGCTGTATGTCTGCGCCGCATAAC +
Preference number: 5 (lower is better)
Translates to: QCCQGPWSAWCSRGS*SPWCIPSCMSAPHN
Trigger: GTTATGCGGCGCAGACATACAGCTCGGAATACACCACGGAGATCATGAACCCCGACTACACCAAGCTGACCATGGACCTTGGCAGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330847.1
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS CCA 90 bp AGATCTTCCTCAGTTCTACCAGGGCACCCAGGACCTTGGACTCGGTaGGCTCCAGAGCCTGTCCCTTACTCTGGTGGTCTTTTAAACTGC +
Preference number: 5 (lower is better)
Translates to: RSSSVLPGHPGPWTR*APEPVPYSGGLLNC
Trigger: GCAGTTTAAAAGACCACCAGAGTAAGGGACAGGCTCTGGAGCCCACCGAGTCCAAGGTCCTGGGTGCCCTGGTAGAACTGAGGAAGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp CAGAGCTCGCTTCTCTCCACCAATGGTCTAATCCCTCTGAATAAGCAGCAGGTCAGGGGAAGGGCTATATaGGGCTTGGACGCAGGGCAT +
Preference number: 5 (lower is better)
Translates to: QSSLLSTNGLIPLNKQQVRGRAI*GLDAGH
Trigger: ATGCCCTGCGTCCAAGCCCAATATAGCCCTTCCCCT...GACCTGCTGCTTATTCAGAGGGATTAGACCATTGGTGGAGAGAAGCGAGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CAA 90 bp CAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGAGGGGAAGGGCTATATaGGGCTTGGACGCAGGGCAT +
Preference number: 5 (lower is better)
Translates to: QSGQGSGSIKNGLKVLDGRGRAI*GLDAGH
Trigger: ATGCCCTGCGTCCAAGCCCAATATAGCCCTTCCCCT...CCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp CAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGCAAGGGCCGCTGCATTaGGTACACGCAGGAAGGCTT +
Preference number: 5 (lower is better)
Translates to: QSGQGSGSIKNGLKVLDGQGPLH*VHAGRL
Trigger: AAGCCTTCCTGCGTGTACCAAATGCAGCGGCCCTTG...CCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTCGCCCCTCCTCCACTTaGATCAAGGGCCGCTGCATT +
Preference number: 5 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPRPSST*IKGRCI
Trigger: AATGCAGCGGCCCTTGATCAAAGTGGAGGAGGGGCG...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp ATGTTCACACTGAGAGAGCTCTCCCGCCAAGGGGAGGAATCACCTGCTTTAATACGCCCCTCCTCCACTTaGATCAAGGGCCGCTGCATT +
Preference number: 5 (lower is better)
Translates to: MFTLRELSRQGEESPALIRPSST*IKGRCI
Trigger: AATGCAGCGGCCCTTGATCAAAGTGGAGGAGGGGCG...TATTAAAGCAGGTGATTCCTCCCCTTGGCGGGAGAGCTCTCTCAGTGTGAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS CCA 90 bp CCCAGGACCTTGGACTCGGTGGGCTCCAGAGCCTGTCCCTTACTCTaGTGGTCTTTTAAACTGCTTGTGATCTTGTTGCATAGCTCTTCG +
Preference number: 5 (lower is better)
Translates to: PRTLDSVGSRACPLL*WSFKLLVILLHSSS
Trigger: CGAAGAGCTATGCAACAAGATCACAAGCAGTTTAAAAGACCACCAGAGTAAGGGACAGGCTCTGGAGCCCACCGAGTCCAAGGTCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp GTCACTTTGTCTAGATCACGAGATAAATCTACAAATTGTAGTTTGTCTGTGCAGGCTCAGGGCCCGGGCTaGCCGGGCTGCCCTCTTCCG +
Preference number: 5 (lower is better)
Translates to: VTLSRSRDKSTNCSLSVQAQGPG*PGCPLP
Trigger: CGGAAGAGGGCAGCCCGGCAAGCCCGGGCCCTGAGC...CTGCACAGACAAACTACAATTTGTAGATTTATCTCGTGATCTAGACAAAGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CAA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGAGGGCTATATTGGGCTaGGACGCAGGGCATATCTGG +
Preference number: 5 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLRAILG*DAGHIW
Trigger: CCAGATATGCCCTGCGTCCAAGCCCAATATAGCCCT...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395097.7
CDS-3UTR CAA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGGGCCGCTGCATTaGGTACACGCAGGAAGGCTT +
Preference number: 5 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHQGPLH*VHAGRL
Trigger: AAGCCTTCCTGCGTGTACCAAATGCAGCGGCCCTTG...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp CAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGAGGGCTATATTGGGCTaGGACGCAGGGCATATCCAC +
Preference number: 5 (lower is better)
Translates to: QSGQGSGSIKNGLKVLDGRAILG*DAGHIH
Trigger: GTGGATATGCCCTGCGTCCAAGCCCAATATAGCCCT...CCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330847.1
ENST00000618101.4
CDS-3UTR CAA 90 bp TCGCTTCTCTCCACCAATGGTCTAATCCCTCTGAATAAGCAGCAGGTCAATCAACGCCCCTCCTCCACTTaGATCAAGGGCCGCTGCATT +
Preference number: 5 (lower is better)
Translates to: SLLSTNGLIPLNKQQVNQRPSST*IKGRCI
Trigger: AATGCAGCGGCCCTTGATCAAAGTGGAGGAGGGGCG...TTGATTGACCTGCTGCTTATTCAGAGGGATTAGACCATTGGTGGAGAGAAGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS CCA 90 bp AGGACCTTGGACTCGGTGGGCTCCAGAGCCTGTCCCTTACTCTGGTaGTCTTTTAAACTGCTTGTGATCTTGTTGCATAGCTCTTCGACT +
Preference number: 5 (lower is better)
Translates to: RTLDSVGSRACPLLW*SFKLLVILLHSSST
Trigger: AGTCGAAGAGCTATGCAACAAGATCACAAGCAGTTTAAAAGACCACCAGAGTAAGGGACAGGCTCTGGAGCCCACCGAGTCCAAGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp ATGACAGGTGCAGCACTGTCAGGGTCACTTGTTAAGGCATTTAGAGATTCAATACTTCCGCAGTGGGCTTaGAGTGCTGTGGCGGTTCCG +
Preference number: 5 (lower is better)
Translates to: MTGAALSGSLVKAFRDSILPQWA*SAVAVP
Trigger: CGGAACCGCCACAGCACTCAAAGCCCACTGCGGAAG...TATTGAATCTCTAAATGCCTTAACAAGTGACCCTGACAGTGCTGCACCTGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CAA 90 bp AAGGAAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATTGCTGGCAGGCGGCGTaGTCCCCGCACACGGCACAC +
Preference number: 5 (lower is better)
Translates to: KEIKRKFLPCLHHIRTFDCWQAA*SPHTAH
Trigger: GTGTGCCGTGTGCGGGGACAACGCCGCCTGCCAGCA...ATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTTGCTGGCAGGCGGCGTaGTCCCCGCACACGGCACAC +
Preference number: 5 (lower is better)
Translates to: EALIVVITMEDRRTCYHLCWQAA*SPHTAH
Trigger: GTGTGCCGTGTGCGGGGACAACGCCGCCTGCCAGCA...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATACAGTGCTGGCAGGCGGCGTaGTCCCCGCACACGGCACAC +
Preference number: 5 (lower is better)
Translates to: KLKGSFCLVCTTYVPLIQCWQAA*SPHTAH
Trigger: GTGTGCCGTGTGCGGGGACAACGCCGCCTGCCAGCA...CTGTATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTAATGGGCTCTTTGGTTaGGAAGGCAGACGACCTCTC +
Preference number: 5 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPNGLFG*EGRRPL
Trigger: GAGAGGTCGTCTGCCTTCCAAACCAAAGAGCCCATT...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATTCCAAACCTATCCCTTaGCTGCGTAGCAAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHSKPIP*LRSKQV
Trigger: CACCTGCTTGCTACGCAGCAAAGGGATAGGTTTGGA...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp ACAGTTACATGTAATCCAGTTTATAATCTGATCCACTTTCAGGATAGCTGGACACCGGCACCGTCAGCGTaGCAAAGTGAGCCCGGGAGG +
Preference number: 5 (lower is better)
Translates to: TVTCNPVYNLIHFQDSWTPAPSA*QSEPGR
Trigger: CCTCCCGGGCTCACTTTGCAACGCTGACGGTGCCGG...TGTCCAGCTATCCTGAAAGTGGATCAGATTATAAACTGGATTACATGTAACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp GTAGAAACATACAAAAGGGAGTACGAACACGGAATGTTGAAACGCAGCCCACTATATCTGGAGGGTATCTaGCGCGCTGAATGGTGGGGC +
Preference number: 5 (lower is better)
Translates to: VETYKREYEHGMLKRSPLYLEGI*RAEWWG
Trigger: GCCCCACCATTCAGCGCGCAAGATACCCTCCAGATA...TAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395097.7
CDS-3UTR CAA 90 bp AGATCACGAGATAAATCTACAAATTGTAGTTTGTCTGTGCAGATTTTCATTGGCTGCTGGCAGGCGGCGTaGTCCCCGCACACGGCACAC +
Preference number: 5 (lower is better)
Translates to: RSRDKSTNCSLSVQIFIGCWQAA*SPHTAH
Trigger: GTGTGCCGTGTGCGGGGACAACGCCGCCTGCCAGCA...GCCAATGAAAATCTGCACAGACAAACTACAATTTGTAGATTTATCTCGTGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CAA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGCAAGATCTCTGGGTGTaGAGTCTGTTAAAGCTCGGA +
Preference number: 5 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLQDLWV*SLLKLG
Trigger: TCCGAGCTTTAACAGACTCAACACCCAGAGATCTTG...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp CAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGCAGGAGGTTGTAGAATaGTTGCACATGCTCAGCATC +
Preference number: 5 (lower is better)
Translates to: QSGQGSGSIKNGLKVLDGQEVVE*LHMLSI
Trigger: GATGCTGAGCATGTGCAACAATTCTACAACCTCCTG...CCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGAATGGCCTAAAAGTCTaGGATGGGCCATACCTCAGA +
Preference number: 5 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLNGLKV*DGPYLR
Trigger: TCTGAGGTATGGCCCATCCAAGACTTTTAGGCCATT...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp CAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGGGAACTCTGGTGGGGTaGATAGAACACAACCAAAAC +
Preference number: 5 (lower is better)
Translates to: QSGQGSGSIKNGLKVLDGGTLVG*IEHNQN
Trigger: GTTTTGGTTGTGTTCTATCAACCCCACCAGAGTTCC...CCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp ACAGGTGCAGCACTGTCAGGGTCACTTGTTAAGGCATTTAGAGATTCAATAAGGAGGGCTATATTGGGCTaGGACGCAGGGCATATCTGG +
Preference number: 5 (lower is better)
Translates to: TGAALSGSLVKAFRDSIRRAILG*DAGHIW
Trigger: CCAGATATGCCCTGCGTCCAAGCCCAATATAGCCCT...CCTTATTGAATCTCTAAATGCCTTAACAAGTGACCCTGACAGTGCTGCACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CAA 90 bp ATGACAGGTGCAGCACTGTCAGGGTCACTTGTTAAGGCATTTAGAGATTCAATACAAGGGCCGCTGCATTaGGTACACGCAGGAAGGCTT +
Preference number: 5 (lower is better)
Translates to: MTGAALSGSLVKAFRDSIQGPLH*VHAGRL
Trigger: AAGCCTTCCTGCGTGTACCAAATGCAGCGGCCCTTG...TATTGAATCTCTAAATGCCTTAACAAGTGACCCTGACAGTGCTGCACCTGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CAA 90 bp GTCACTTTGTCTAGATCACGAGATAAATCTACAAATTGTAGTTTGTCTGTGCAGTGCGGCGGCGAGGGCTaGAAGTGGAAGAGCGGGAAG +
Preference number: 5 (lower is better)
Translates to: VTLSRSRDKSTNCSLSVQCGGEG*KWKSGK
Trigger: CTTCCCGCTCTTCCACTTCAAGCCCTCGCCGCCGCA...CTGCACAGACAAACTACAATTTGTAGATTTATCTCGTGATCTAGACAAAGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CAA 90 bp ACAGTTACATGTAATCCAGTTTATAATCTGATCCACTTTCAGGATAGCTGGACATGCGGCGGCGAGGGCTaGAAGTGGAAGAGCGGGAAG +
Preference number: 5 (lower is better)
Translates to: TVTCNPVYNLIHFQDSWTCGGEG*KWKSGK
Trigger: CTTCCCGCTCTTCCACTTCAAGCCCTCGCCGCCGCA...TGTCCAGCTATCCTGAAAGTGGATCAGATTATAAACTGGATTACATGTAACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp ATGTTCACACTGAGAGAGCTCTCCCGCCAAGGGGAGGAATCACCTGCTTTAATACTGCTTGTGATCTTGTaGCATAGCTCTTCGACTCTC +
Preference number: 5 (lower is better)
Translates to: MFTLRELSRQGEESPALILLVIL*HSSSTL
Trigger: GAGAGTCGAAGAGCTATGCAACAAGATCACAAGCAG...TATTAAAGCAGGTGATTCCTCCCCTTGGCGGGAGAGCTCTCTCAGTGTGAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp ACAGTTACATGTAATCCAGTTTATAATCTGATCCACTTTCAGGATAGCTGGACAAGGGCACCCAGGACCTaGGACTCGGTGGGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: TVTCNPVYNLIHFQDSWTRAPRT*DSVGSR
Trigger: TCTGGAGCCCACCGAGTCCAAGGTCCTGGGTGCCCT...TGTCCAGCTATCCTGAAAGTGGATCAGATTATAAACTGGATTACATGTAACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGCCTGGCGAACAACCCTaGGCTGTTCTTGTTTTTAAA +
Preference number: 5 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLPGEQP*AVLVFK
Trigger: TTTAAAAACAAGAACAGCCAAGGGTTGTTCGCCAGG...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTAATGGCCTAAAAGTCTaGGATGGGCCATACCTCAGA +
Preference number: 5 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPNGLKV*DGPYLR
Trigger: TCTGAGGTATGGCCCATCCAAGACTTTTAGGCCATT...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTGGAACTCTGGTGGGGTaGATAGAACACAACCAAAAC +
Preference number: 5 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPGTLVG*IEHNQN
Trigger: GTTTTGGTTGTGTTCTATCAACCCCACCAGAGTTCC...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTACCAGCTGTTTGACCTaGAGTAACTCTTCACCCTTC +
Preference number: 5 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPTSCLT*SNSSPF
Trigger: GAAGGGTGAAGAGTTACTCAAGGTCAAACAGCTGGT...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAACCAGCTGTTTGACCTaGAGTAACTCTTCACCCTTC +
Preference number: 5 (lower is better)
Translates to: RIAGQSGQGSGSIKNGLKTSCLT*SNSSPF
Trigger: GAAGGGTGAAGAGTTACTCAAGGTCAAACAGCTGGT...TTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTGAGGTTGTAGAATTGTaGCACATGCTCAGCATCTGT +
Preference number: 5 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPEVVEL*HMLSIC
Trigger: ACAGATGCTGAGCATGTGCAACAATTCTACAACCTC...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp ATGTTCACACTGAGAGAGCTCTCCCGCCAAGGGGAGGAATCACCTGCTTTAATAAAGGAAGTTTCTGCCTaGTTTGCACCACATACGTAC +
Preference number: 5 (lower is better)
Translates to: MFTLRELSRQGEESPALIKEVSA*FAPHTY
Trigger: GTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTT...TATTAAAGCAGGTGATTCCTCCCCTTGGCGGGAGAGCTCTCTCAGTGTGAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS GCA 90 bp TGTCTGATCTTCTTTGGGGAGATCAGTAAATCCCGGAATCTTTTCTaGCCAGCTTCTGGATACATCAATGGAGGCTGTCAGGAGGTTGTA +
Preference number: 5 (lower is better)
Translates to: CLIFFGEISKSRNLF*PASGYINGGCQEVV
Trigger: TACAACCTCCTGACAGCCTCCATTGATGTATCCAGAAGCTGGGCAGAAAAGATTCCGGGATTTACTGATCTCCCCAAAGAAGATCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTAGGGGAAGGGCTATATaGGGCTTGGACGCAGGGCAT +
Preference number: 5 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSRGRAI*GLDAGH
Trigger: ATGCCCTGCGTCCAAGCCCAATATAGCCCTTCCCCT...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp GTTTGTCTGTGCAGATTTTCATTGGCACAACCACCAGGAATCCTGCAACAATGTGTTGTAATGGGCTCTTaGGTTTGGAAGGCAGACGAC +
Preference number: 5 (lower is better)
Translates to: VCLCRFSLAQPPGILQQCVVMGS*VWKADD
Trigger: GTCGTCTGCCTTCCAAACCAAAGAGCCCATTACAAC...ACATTGTTGCAGGATTCCTGGTGGTTGTGCCAATGAAAATCTGCACAGACAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CAA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATTGCAGGACAAGTCCATaGCAGAACACAAACTTATCT +
Preference number: 5 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHCRTSP*QNTNLS
Trigger: AGATAAGTTTGTGTTCTGCAATGGACTTGTCCTGCA...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATAAACTGCTTGTGATCTaGTTGCATAGCTCTTCGACT +
Preference number: 5 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHKLLVI*LHSSST
Trigger: AGTCGAAGAGCTATGCAACAAGATCACAAGCAGTTT...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AGCTGTTTGACCTTGAGTAACTCTTCACCCTTCAATGGGCCCCAGTTTGCTCCTAAGTTTCTGCCTTGTTaGCACCACATACGTACCTTT +
Preference number: 5 (lower is better)
Translates to: SCLTLSNSSPFNGPQFAPKFLPC*HHIRTF
Trigger: AAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTT...AGGAGCAAACTGGGGCCCATTGAAGGGTGAAGAGTTACTCAAGGTCAAACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp CAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGGATGGGACAGCCATTATTGTTTaGCCATGTCTGATTTGTAGG +
Preference number: 5 (lower is better)
Translates to: QSGQGSGSIKNGLKVLDGTAIIV*PCLICR
Trigger: CCTACAAATCAGACATGGCAAAACAATAATGGCTGT...CCCATCCAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS TCA 90 bp GCTCCAGAGCCTGTCCCTTACTCTGGTGGTCTTTTAAACTGCTTGTaGTCTTGTTGCATAGCTCTTCGACTCTCTTTGGTTCTTTTAACC +
Preference number: 5 (lower is better)
Translates to: APEPVPYSGGLLNCL*SCCIALRLSLVLLT
Trigger: GGTTAAAAGAACCAAAGAGAGTCGAAGAGCTATGCAACAAGATCACAAGCAGTTTAAAAGACCACCAGAGTAAGGGACAGGCTCTGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATACAGAGGGGAAGGGCTATATaGGGCTTGGACGCAGGGCAT +
Preference number: 5 (lower is better)
Translates to: KLKGSFCLVCTTYVPLIQRGRAI*GLDAGH
Trigger: ATGCCCTGCGTCCAAGCCCAATATAGCCCTTCCCCT...CTGTATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATACAGCAAGGGCCGCTGCATTaGGTACACGCAGGAAGGCTT +
Preference number: 5 (lower is better)
Translates to: KLKGSFCLVCTTYVPLIQQGPLH*VHAGRL
Trigger: AAGCCTTCCTGCGTGTACCAAATGCAGCGGCCCTTG...CTGTATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp TTAAATATTGTAGCCATTTCCACTGTAGGCAGGAGAGAGCCAAAAGCAGGAACCCGGTTTCGACGTCTCTaGTCTACTGGGCAGTTTTTA +
Preference number: 5 (lower is better)
Translates to: LNIVAISTVGRREPKAGTRFRRL*STGQFL
Trigger: TAAAAACTGCCCAGTAGACAAGAGACGTCGAAACCG...GGTTCCTGCTTTTGGCTCTCTCCTGCCTACAGTGGAAATGGCTACAATATTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CAA 90 bp GTAGAAACATACAAAAGGGAGTACGAACACGGAATGTTGAAACGCAGCCCACTACGGTTTCGACGTCTCTaGTCTACTGGGCAGTTTTTA +
Preference number: 5 (lower is better)
Translates to: VETYKREYEHGMLKRSPLRFRRL*STGQFL
Trigger: TAAAAACTGCCCAGTAGACAAGAGACGTCGAAACCG...TAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp GTAGAAACATACAAAAGGGAGTACGAACACGGAATGTTGAAACGCAGCCCACTACAAGATCTCTGGGTGTaGAGTCTGTTAAAGCTCGGA +
Preference number: 5 (lower is better)
Translates to: VETYKREYEHGMLKRSPLQDLWV*SLLKLG
Trigger: TCCGAGCTTTAACAGACTCAACACCCAGAGATCTTG...TAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp GTAGAAACATACAAAAGGGAGTACGAACACGGAATGTTGAAACGCAGCCCACTACAGGAGGTTGTAGAATaGTTGCACATGCTCAGCATC +
Preference number: 5 (lower is better)
Translates to: VETYKREYEHGMLKRSPLQEVVE*LHMLSI
Trigger: GATGCTGAGCATGTGCAACAATTCTACAACCTCCTG...TAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp GCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAAGTCTTGACCACATACGTACCTTaGATACAGGAAGCATATTTT +
Preference number: 5 (lower is better)
Translates to: AGQSGQGSGSIKNGLKVLTTYVP*IQEAYF
Trigger: AAAATATGCTTCCTGTATCAAAGGTACGTATGTGGT...CAAGACTTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp GTAGAAACATACAAAAGGGAGTACGAACACGGAATGTTGAAACGCAGCCCACTATACGAACACGGAATGTaGAAACGCAGCCCACTAATC +
Preference number: 5 (lower is better)
Translates to: VETYKREYEHGMLKRSPLYEHGM*KRSPLI
Trigger: GATTAGTGGGCTGCGTTTCAACATTCCGTGTTCGTA...TAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp TCACTTTGTCTAGATCACGAGATAAATCTACAAATTGTAGTTTGTCTGTGCAGATATCTGGAGGGTATCTaGCGCGCTGAATGGTGGGGC +
Preference number: 5 (lower is better)
Translates to: SLCLDHEINLQIVVCLCRYLEGI*RAEWWG
Trigger: GCCCCACCATTCAGCGCGCAAGATACCCTCCAGATA...TCTGCACAGACAAACTACAATTTGTAGATTTATCTCGTGATCTAGACAAAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CAA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTAATGGGCTCTTTGGTTaGGAAGGCAGACGACCTCTC +
Preference number: 5 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSNGLFG*EGRRPL
Trigger: GAGAGGTCGTCTGCCTTCCAAACCAAAGAGCCCATT...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AAGGAAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATAGGGCTATATTGGGCTaGGACGCAGGGCATATCCAC +
Preference number: 5 (lower is better)
Translates to: KEIKRKFLPCLHHIRTFDRAILG*DAGHIH
Trigger: GTGGATATGCCCTGCGTCCAAGCCCAATATAGCCCT...ATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330847.1
ENST00000618101.4
CDS-3UTR CAA 90 bp ATCTTTAAGACACATCCTACCCTGGCGAACAACCCTTGGCTGTTCTTGTTTTTACTGCTTGTGATCTTGTaGCATAGCTCTTCGACTCTC +
Preference number: 5 (lower is better)
Translates to: IFKTHPTLANNPWLFLFLLLVIL*HSSSTL
Trigger: GAGAGTCGAAGAGCTATGCAACAAGATCACAAGCAG...TAAAAACAAGAACAGCCAAGGGTTGTTCGCCAGGGTAGGATGTGTCTTAAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp ATGTTCACACTGAGAGAGCTCTCCCGCCAAGGGGAGGAATCACCTGCTTTAATAACCACATACGTACCTTaGATACAGGAAGCATATTTT +
Preference number: 5 (lower is better)
Translates to: MFTLRELSRQGEESPALITTYVP*IQEAYF
Trigger: AAAATATGCTTCCTGTATCAAAGGTACGTATGTGGT...TATTAAAGCAGGTGATTCCTCCCCTTGGCGGGAGAGCTCTCTCAGTGTGAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAATATCTGGGTTATACTTaGCAGCAATTAGGCAATTCA +
Preference number: 5 (lower is better)
Translates to: RIAGQSGQGSGSIKNGLKYLGYT*QQLGNS
Trigger: TGAATTGCCTAATTGCTGCAAAGTATAACCCAGATA...TTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATCAAGAATGGCCTAAAATGGTCTGAAGCTATCTaGTATGAAATGTTAGCTTTC +
Preference number: 5 (lower is better)
Translates to: RIAGQSGQGSGSIKNGLKWSEAI*YEMLAF
Trigger: GAAAGCTAACATTTCATACAAGATAGCTTCAGACCA...TTTTAGGCCATTCTTGATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AATCTGATCCACTTTCAGGATAGCTGGACAGTCAGGGCAGGGATCTGGTTCCATTGGTCTGAAGCTATCTaGTATGAAATGTTAGCTTTC +
Preference number: 5 (lower is better)
Translates to: NLIHFQDSWTVRAGIWFHWSEAI*YEMLAF
Trigger: GAAAGCTAACATTTCATACAAGATAGCTTCAGACCA...ATGGAACCAGATCCCTGCCCTGACTGTCCAGCTATCCTGAAAGTGGATCAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS CCA 90 bp TGTCTTTCTGTGATCATGCTCAGTGCTGACAGGCAGGCTAAGGCTTaGATATCAAGGTTCAGGCTCTGCAAATTTAAGGAAAAGTCTTTA +
Preference number: 5 (lower is better)
Translates to: CLSVIMLSADRQAKA*ISRFRLCKFKEKSL
Trigger: TAAAGACTTTTCCTTAAATTTGCAGAGCCTGAACCTTGATATCCAAGCCTTAGCCTGCCTGTCAGCACTGAGCATGATCACAGAAAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AAGGAAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATAATGGGCTCTTTGGTTaGGAAGGCAGACGACCTCTC +
Preference number: 5 (lower is better)
Translates to: KEIKRKFLPCLHHIRTFDNGLFG*EGRRPL
Trigger: GAGAGGTCGTCTGCCTTCCAAACCAAAGAGCCCATT...ATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTGTTGTAATGGGCTCTTaGGTTTGGAAGGCAGACGAC +
Preference number: 5 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSVVMGS*VWKADD
Trigger: GTCGTCTGCCTTCCAAACCAAAGAGCCCATTACAAC...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp GTTTGTCTGTGCAGATTTTCATTGGCACAACCACCAGGAATCCTGCAACAATGTCACTGTCAGGGTCACTaGTTAAGGCATTTAGAGATT +
Preference number: 5 (lower is better)
Translates to: VCLCRFSLAQPPGILQQCHCQGH*LRHLEI
Trigger: AATCTCTAAATGCCTTAACAAGTGACCCTGACAGTG...ACATTGTTGCAGGATTCCTGGTGGTTGTGCCAATGAAAATCTGCACAGACAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CAA 90 bp ATCTTTAAGACACATCCTACCCTGGCGAACAACCCTTGGCTGTTCTTGTTTTTAGAGGTTGTAGAATTGTaGCACATGCTCAGCATCTGT +
Preference number: 5 (lower is better)
Translates to: IFKTHPTLANNPWLFLFLEVVEL*HMLSIC
Trigger: ACAGATGCTGAGCATGTGCAACAATTCTACAACCTC...TAAAAACAAGAACAGCCAAGGGTTGTTCGCCAGGGTAGGATGTGTCTTAAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp GTAGAAACATACAAAAGGGAGTACGAACACGGAATGTTGAAACGCAGCCCACTATGCAGGACAAGTCCATaGCAGAACACAAACTTATCT +
Preference number: 5 (lower is better)
Translates to: VETYKREYEHGMLKRSPLCRTSP*QNTNLS
Trigger: AGATAAGTTTGTGTTCTGCAATGGACTTGTCCTGCA...TAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp ACAGTTACATGTAATCCAGTTTATAATCTGATCCACTTTCAGGATAGCTGGACATCCAAACCTATCCCTTaGCTGCGTAGCAAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: TVTCNPVYNLIHFQDSWTSKPIP*LRSKQV
Trigger: CACCTGCTTGCTACGCAGCAAAGGGATAGGTTTGGA...TGTCCAGCTATCCTGAAAGTGGATCAGATTATAAACTGGATTACATGTAACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AAGGAAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATTCCAAACCTATCCCTTaGCTGCGTAGCAAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: KEIKRKFLPCLHHIRTFDSKPIP*LRSKQV
Trigger: CACCTGCTTGCTACGCAGCAAAGGGATAGGTTTGGA...ATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp ATCTTTAAGACACATCCTACCCTGGCGAACAACCCTTGGCTGTTCTTGTTTTTACCTGGCGAACAACCCTaGGCTGTTCTTGTTTTTAAA +
Preference number: 5 (lower is better)
Translates to: IFKTHPTLANNPWLFLFLPGEQP*AVLVFK
Trigger: TTTAAAAACAAGAACAGCCAAGGGTTGTTCGCCAGG...TAAAAACAAGAACAGCCAAGGGTTGTTCGCCAGGGTAGGATGTGTCTTAAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTCGGTTTCGACGTCTCTaGTCTACTGGGCAGTTTTTA +
Preference number: 5 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSRFRRL*STGQFL
Trigger: TAAAAACTGCCCAGTAGACAAGAGACGTCGAAACCG...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AGATCACGAGATAAATCTACAAATTGTAGTTTGTCTGTGCAGATTTTCATTGGCAATGGGCTCTTTGGTTaGGAAGGCAGACGACCTCTC +
Preference number: 5 (lower is better)
Translates to: RSRDKSTNCSLSVQIFIGNGLFG*EGRRPL
Trigger: GAGAGGTCGTCTGCCTTCCAAACCAAAGAGCCCATT...GCCAATGAAAATCTGCACAGACAAACTACAATTTGTAGATTTATCTCGTGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CAA 90 bp AAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATACAGGTTGTAATGGGCTCTTaGGTTTGGAAGGCAGACGAC +
Preference number: 5 (lower is better)
Translates to: KLKGSFCLVCTTYVPLIQVVMGS*VWKADD
Trigger: GTCGTCTGCCTTCCAAACCAAAGAGCCCATTACAAC...CTGTATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTCAAGATCTCTGGGTGTaGAGTCTGTTAAAGCTCGGA +
Preference number: 5 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSQDLWV*SLLKLG
Trigger: TCCGAGCTTTAACAGACTCAACACCCAGAGATCTTG...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTACGAACACGGAATGTaGAAACGCAGCCCACTAATC +
Preference number: 5 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSYEHGM*KRSPLI
Trigger: GATTAGTGGGCTGCGTTTCAACATTCCGTGTTCGTA...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp GTTTGTCTGTGCAGATTTTCATTGGCACAACCACCAGGAATCCTGCAACAATGTAATGGATGCACTGAATaGCTAAATGAAGCGAGAAAT +
Preference number: 5 (lower is better)
Translates to: VCLCRFSLAQPPGILQQCNGCTE*LNEARN
Trigger: ATTTCTCGCTTCATTTAGCAATTCAGTGCATCCATT...ACATTGTTGCAGGATTCCTGGTGGTTGTGCCAATGAAAATCTGCACAGACAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CAA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTCAGGAGGTTGTAGAATaGTTGCACATGCTCAGCATC +
Preference number: 5 (lower is better)
Translates to: EALIVVITMEDRRTCYHLQEVVE*LHMLSI
Trigger: GATGCTGAGCATGTGCAACAATTCTACAACCTCCTG...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp GTAGAAACATACAAAAGGGAGTACGAACACGGAATGTTGAAACGCAGCCCACTAACCACATACGTACCTTaGATACAGGAAGCATATTTT +
Preference number: 5 (lower is better)
Translates to: VETYKREYEHGMLKRSPLTTYVP*IQEAYF
Trigger: AAAATATGCTTCCTGTATCAAAGGTACGTATGTGGT...TAGTGGGCTGCGTTTCAACATTCCGTGTTCGTACTCCCTTTTGTATGTTTCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AAGGAAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATAATGGCCTAAAAGTCTaGGATGGGCCATACCTCAGA +
Preference number: 5 (lower is better)
Translates to: KEIKRKFLPCLHHIRTFDNGLKV*DGPYLR
Trigger: TCTGAGGTATGGCCCATCCAAGACTTTTAGGCCATT...ATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATACAGGGAACTCTGGTGGGGTaGATAGAACACAACCAAAAC +
Preference number: 5 (lower is better)
Translates to: KLKGSFCLVCTTYVPLIQGTLVG*IEHNQN
Trigger: GTTTTGGTTGTGTTCTATCAACCCCACCAGAGTTCC...CTGTATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTTACGAACACGGAATGTaGAAACGCAGCCCACTAATC +
Preference number: 5 (lower is better)
Translates to: EALIVVITMEDRRTCYHLYEHGM*KRSPLI
Trigger: GATTAGTGGGCTGCGTTTCAACATTCCGTGTTCGTA...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTACCAGCTGTTTGACCTaGAGTAACTCTTCACCCTTC +
Preference number: 5 (lower is better)
Translates to: EALIVVITMEDRRTCYHLTSCLT*SNSSPF
Trigger: GAAGGGTGAAGAGTTACTCAAGGTCAAACAGCTGGT...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AGATCACGAGATAAATCTACAAATTGTAGTTTGTCTGTGCAGATTTTCATTGGCCAAGATCTCTGGGTGTaGAGTCTGTTAAAGCTCGGA +
Preference number: 5 (lower is better)
Translates to: RSRDKSTNCSLSVQIFIGQDLWV*SLLKLG
Trigger: TCCGAGCTTTAACAGACTCAACACCCAGAGATCTTG...GCCAATGAAAATCTGCACAGACAAACTACAATTTGTAGATTTATCTCGTGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338488.8
CDS-3UTR CAA 90 bp AAGGAAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATGAGGTTGTAGAATTGTaGCACATGCTCAGCATCTGT +
Preference number: 5 (lower is better)
Translates to: KEIKRKFLPCLHHIRTFDEVVEL*HMLSIC
Trigger: ACAGATGCTGAGCATGTGCAACAATTCTACAACCTC...ATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTGCTCTTCGACTCTCTTaGGTTCTTTTAACCCATGTC +
Preference number: 5 (lower is better)
Translates to: EALIVVITMEDRRTCYHLALRLS*VLLTHV
Trigger: GACATGGGTTAAAAGAACCAAAGAGAGTCGAAGAGC...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATACAGGCTCTTCGACTCTCTTaGGTTCTTTTAACCCATGTC +
Preference number: 5 (lower is better)
Translates to: KLKGSFCLVCTTYVPLIQALRLS*VLLTHV
Trigger: GACATGGGTTAAAAGAACCAAAGAGAGTCGAAGAGC...CTGTATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp ACAGTTACATGTAATCCAGTTTATAATCTGATCCACTTTCAGGATAGCTGGACAGCTCTTCGACTCTCTTaGGTTCTTTTAACCCATGTC +
Preference number: 5 (lower is better)
Translates to: TVTCNPVYNLIHFQDSWTALRLS*VLLTHV
Trigger: GACATGGGTTAAAAGAACCAAAGAGAGTCGAAGAGC...TGTCCAGCTATCCTGAAAGTGGATCAGATTATAAACTGGATTACATGTAACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp GGAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTAAACTGCTTGTGATCTaGTTGCATAGCTCTTCGACT +
Preference number: 5 (lower is better)
Translates to: GGSHSCNNYGRQKNMLSSKLLVI*LHSSST
Trigger: AGTCGAAGAGCTATGCAACAAGATCACAAGCAGTTT...AGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AAGGAAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATCCTGCTGGGATAGCATaGTCCAAAAGTGCTTTGTTA +
Preference number: 5 (lower is better)
Translates to: KEIKRKFLPCLHHIRTFDPAGIA*SKSALL
Trigger: TAACAAAGCACTTTTGGACAATGCTATCCCAGCAGG...ATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTCCTGCTGGGATAGCATaGTCCAAAAGTGCTTTGTTA +
Preference number: 5 (lower is better)
Translates to: EALIVVITMEDRRTCYHLPAGIA*SKSALL
Trigger: TAACAAAGCACTTTTGGACAATGCTATCCCAGCAGG...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp ACAGTTACATGTAATCCAGTTTATAATCTGATCCACTTTCAGGATAGCTGGACACCTGCTGGGATAGCATaGTCCAAAAGTGCTTTGTTA +
Preference number: 5 (lower is better)
Translates to: TVTCNPVYNLIHFQDSWTPAGIA*SKSALL
Trigger: TAACAAAGCACTTTTGGACAATGCTATCCCAGCAGG...TGTCCAGCTATCCTGAAAGTGGATCAGATTATAAACTGGATTACATGTAACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTAAGGAAGTTTCTGCCTaGTTTGCACCACATACGTAC +
Preference number: 5 (lower is better)
Translates to: EALIVVITMEDRRTCYHLKEVSA*FAPHTY
Trigger: GTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTT...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATACAGTGCAGGACAAGTCCATaGCAGAACACAAACTTATCT +
Preference number: 5 (lower is better)
Translates to: KLKGSFCLVCTTYVPLIQCRTSP*QNTNLS
Trigger: AGATAAGTTTGTGTTCTGCAATGGACTTGTCCTGCA...CTGTATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTAAACTGCTTGTGATCTaGTTGCATAGCTCTTCGACT +
Preference number: 5 (lower is better)
Translates to: EALIVVITMEDRRTCYHLKLLVI*LHSSST
Trigger: AGTCGAAGAGCTATGCAACAAGATCACAAGCAGTTT...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AAGGAAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATAAGTTTCTGCCTTGTTaGCACCACATACGTACCTTT +
Preference number: 5 (lower is better)
Translates to: KEIKRKFLPCLHHIRTFDKFLPC*HHIRTF
Trigger: AAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTT...ATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp AAATTAAAAGGAAGTTTCTGCCTTGTTTGCACCACATACGTACCTTTGATACAGACAGCCATTATTGTTTaGCCATGTCTGATTTGTAGG +
Preference number: 5 (lower is better)
Translates to: KLKGSFCLVCTTYVPLIQTAIIV*PCLICR
Trigger: CCTACAAATCAGACATGGCAAAACAATAATGGCTGT...CTGTATCAAAGGTACGTATGTGGTGCAAACAAGGCAGAAACTTCCTTTTAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp ACAGTTACATGTAATCCAGTTTATAATCTGATCCACTTTCAGGATAGCTGGACATATCTGGGTTATACTTaGCAGCAATTAGGCAATTCA +
Preference number: 5 (lower is better)
Translates to: TVTCNPVYNLIHFQDSWTYLGYT*QQLGNS
Trigger: TGAATTGCCTAATTGCTGCAAAGTATAACCCAGATA...TGTCCAGCTATCCTGAAAGTGGATCAGATTATAAACTGGATTACATGTAACTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS-3UTR CAA 90 bp GAGGCTCTCATAGTTGTAATAACTATGGAAGACAGAAGAACATGCTATCATCTTTGGTCTGAAGCTATCTaGTATGAAATGTTAGCTTTC +
Preference number: 5 (lower is better)
Translates to: EALIVVITMEDRRTCYHLWSEAI*YEMLAF
Trigger: GAAAGCTAACATTTCATACAAGATAGCTTCAGACCA...AAGATGATAGCATGTTCTTCTGTCTTCCATAGTTATTACAACTATGAGAGCCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS CAA 90 bp GAGGGCGTGAGGCCGAGAGGCGGGAAGGCCAGCGGGGCCGCCCTCTaGGCCAGCGGCAGCCCGTACGGGTGGCTCTCAAGCGCGGCGGCC +
Preference number: 6 (lower is better)
Translates to: EGVRPRGGKASGAAL*ASGSPYGWLSSAAA
Trigger: GGCCGCCGCGCTTGAGAGCCACCCGTACGGGCTGCCGCTGGCCAAGAGGGCGGCCCCGCTGGCCTTCCCGCCTCTCGGCCTCACGCCCTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330847.1
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS GCA 72 bp GAGCGGACGTCCGGCGAGGCGAAGCGCCGGCAGTGCTaGCCGGCACCGCTAAGGGTCCAGGCTCAGGGCCCG +
Preference number: 6 (lower is better)
Translates to: ERTSGEAKRRQC*PAPLRVQAQGP
Trigger: CGGGCCCTGAGCCTGGACCCTTAGCGGTGCCGGGCAGCACTGCCGGCGCTTCGCCTCGCCGGACGTCCGCTC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS CCA 72 bp GGCCGAGAGGCGGGAAGGCCAGCGGGGCCGCCCTCTTaGCCAGCGGCAGCCCGTACGGGTGGCTCTCAAGCG +
Preference number: 6 (lower is better)
Translates to: GREAGRPAGPPS*PAAARTGGSQA
Trigger: CGCTTGAGAGCCACCCGTACGGGCTGCCGCTGGCCAAGAGGGCGGCCCCGCTGGCCTTCCCGCCTCTCGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330847.1
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS TCA 72 bp TCCACGGCCACTGCCGGCACCGTCAGCGTTGCAAAGTaGGCCCGGGAGGGGCGTCCAGCTGCGGCGCCGCGC +
Preference number: 6 (lower is better)
Translates to: STATAGTVSVAK*AREGRPAAAPR
Trigger: GCGCGGCGCCGCAGCTGGACGCCCCTCCCGGGCTCACTTTGCAACGCTGACGGTGCCGGCAGTGGCCGTGGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS GCA 72 bp GAGGAGCGGACGTCCGGCGAGGCGAAGCGCCGGCAGTaGTGCCCGGCACCGCTAAGGGTCCAGGCTCAGGGC +
Preference number: 6 (lower is better)
Translates to: EERTSGEAKRRQ*CPAPLRVQAQG
Trigger: GCCCTGAGCCTGGACCCTTAGCGGTGCCGGGCAGCACTGCCGGCGCTTCGCCTCGCCGGACGTCCGCTCCTC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS CAA 72 bp AGGCCGAGAGGCGGGAAGGCCAGCGGGGCCGCCCTCTaGGCCAGCGGCAGCCCGTACGGGTGGCTCTCAAGC +
Preference number: 6 (lower is better)
Translates to: RPRGGKASGAAL*ASGSPYGWLSS
Trigger: GCTTGAGAGCCACCCGTACGGGCTGCCGCTGGCCAAGAGGGCGGCCCCGCTGGCCTTCCCGCCTCTCGGCCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330847.1
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS CAA 90 bp CCGCCGCTGTTCCCACCTCCACGGCCACTGCCGGCACCGTCAGCGTaGCAAAGTGAGCCCGGGAGGGGCGTCCAGCTGCGGCGCCGCGCT +
Preference number: 6 (lower is better)
Translates to: PPLFPPPRPLPAPSA*QSEPGRGVQLRRRA
Trigger: AGCGCGGCGCCGCAGCTGGACGCCCCTCCCGGGCTCACTTTGCAACGCTGACGGTGCCGGCAGTGGCCGTGGAGGTGGGAACAGCGGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS GCA 72 bp CAGCGTTGCAAAGTGAGCCCGGGAGGGGCGTCCAGCTaGGGCGCCGCGCTGCACCGGCAAGGGCTCAGGGCA +
Preference number: 6 (lower is better)
Translates to: QRCKVSPGGASS*GAALHRQGLRA
Trigger: TGCCCTGAGCCCTTGCCGGTGCAGCGCGGCGCCGCAGCTGGACGCCCCTCCCGGGCTCACTTTGCAACGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS GCA 72 bp CCTTCATCGGCGGGTCCAGCAGCGGGCCGGGTGCGATaGAGCCGGGCGCCGAGGGCAGTGCCTCGTCCCATA +
Preference number: 6 (lower is better)
Translates to: PSSAGPAAGRVR*SRAPRAVPRPI
Trigger: TATGGGACGAGGCACTGCCCTCGGCGCCCGGCTGCATCGCACCCGGCCCGCTGCTGGACCCGCCGATGAAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330847.1
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS CCA 72 bp CGGCACACGTGCCCTCGCCAGACGACGAGCTCCTGCTaGGCGGCGACGGCAGGCTGGGACTCTCGCCCAGCA +
Preference number: 6 (lower is better)
Translates to: RHTCPRQTTSSC*AATAGWDSRPA
Trigger: TGCTGGGCGAGAGTCCCAGCCTGCCGTCGCCGCCCAGCAGGAGCTCGTCGTCTGGCGAGGGCACGTGTGCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330847.1
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS GCA 72 bp TCCCACCTCCACGGCCACTGCCGGCACCGTCAGCGTTaGAAAGTGAGCCCGGGAGGGGCGTCCAGCTGCGGC +
Preference number: 6 (lower is better)
Translates to: SHLHGHCRHRQR*KVSPGGASSCG
Trigger: GCCGCAGCTGGACGCCCCTCCCGGGCTCACTTTGCAACGCTGACGGTGCCGGCAGTGGCCGTGGAGGTGGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS GCA 72 bp ACACGGCACACGTGCCCTCGCCAGACGACGAGCTCCTaGTGGGCGGCGACGGCAGGCTGGGACTCTCGCCCA +
Preference number: 6 (lower is better)
Translates to: TRHTCPRQTTSS*WAATAGWDSRP
Trigger: TGGGCGAGAGTCCCAGCCTGCCGTCGCCGCCCAGCAGGAGCTCGTCGTCTGGCGAGGGCACGTGTGCCGTGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330847.1
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS CAA 90 bp CAGTGCTGCCCGGCACCGCTAAGGGTCCAGGCTCAGGGCCCGGGCTaGCCGGGCTGCCCTCTTCCGCAGTGGGCTTTGAGTGCTGTGGCG +
Preference number: 6 (lower is better)
Translates to: QCCPAPLRVQAQGPG*PGCPLPQWALSAVA
Trigger: CGCCACAGCACTCAAAGCCCACTGCGGAAGAGGGCAGCCCGGCAAGCCCGGGCCCTGAGCCTGGACCCTTAGCGGTGCCGGGCAGCACTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS CAA 72 bp TTCCCACCTCCACGGCCACTGCCGGCACCGTCAGCGTaGCAAAGTGAGCCCGGGAGGGGCGTCCAGCTGCGG +
Preference number: 6 (lower is better)
Translates to: FPPPRPLPAPSA*QSEPGRGVQLR
Trigger: CCGCAGCTGGACGCCCCTCCCGGGCTCACTTTGCAACGCTGACGGTGCCGGCAGTGGCCGTGGAGGTGGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS GCA 72 bp GGAGGATGCCGCCGCTGTTCCCACCTCCACGGCCACTaGCGGCACCGTCAGCGTTGCAAAGTGAGCCCGGGA +
Preference number: 6 (lower is better)
Translates to: GGCRRCSHLHGH*RHRQRCKVSPG
Trigger: TCCCGGGCTCACTTTGCAACGCTGACGGTGCCGGCAGTGGCCGTGGAGGTGGGAACAGCGGCGGCATCCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS GCA 72 bp CTAAGGGTCCAGGCTCAGGGCCCGGGCTTGCCGGGCTaGCCTCTTCCGCAGTGGGCTTTGAGTGCTGTGGCG +
Preference number: 6 (lower is better)
Translates to: LRVQAQGPGLPG*PLPQWALSAVA
Trigger: CGCCACAGCACTCAAAGCCCACTGCGGAAGAGGGCAGCCCGGCAAGCCCGGGCCCTGAGCCTGGACCCTTAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS CCA 72 bp GTACAAGCCCAGCGGCTCCCGGAGGCGGTGAGCGGCTaGTGGGGGATGCTGCGATCCCGACTCATGGGAGAG +
Preference number: 6 (lower is better)
Translates to: VQAQRLPEAVSG*WGMLRSRLMGE
Trigger: CTCTCCCATGAGTCGGGATCGCAGCATCCCCCACCAGCCGCTCACCGCCTCCGGGAGCCGCTGGGCTTGTAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS CCA 72 bp CGCAGGGCATATCTGGAGGGTATCTTGCGCGCTGAATaGTGGGGCTGGGGGTCTCTCCAGCGGAGGCTGAGA +
Preference number: 6 (lower is better)
Translates to: RRAYLEGILRAE*WGWGSLQRRLR
Trigger: TCTCAGCCTCCGCTGGAGAGACCCCCAGCCCCACCATTCAGCGCGCAAGATACCCTCCAGATATGCCCTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338488.8
ENST00000395097.7
CDS TCA 72 bp GGTGATGGTAGCTGGGCGCCCGCCCCTCCTCCACTTTaGTCAAGGGCCGCTGCATTTGGTACACGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: GDGSWAPAPPPL*SRAAAFGTRRK
Trigger: CTTCCTGCGTGTACCAAATGCAGCGGCCCTTGATCAAAGTGGAGGAGGGGCGGGCGCCCAGCTACCATCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330847.1
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS CCA 72 bp AGGGCATATCTGGAGGGTATCTTGCGCGCTGAATGGTaGGGCTGGGGGTCTCTCCAGCGGAGGCTGAGAGTG +
Preference number: 6 (lower is better)
Translates to: RAYLEGILRAEW*GWGSLQRRLRV
Trigger: CACTCTCAGCCTCCGCTGGAGAGACCCCCAGCCCCACCATTCAGCGCGCAAGATACCCTCCAGATATGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338488.8
ENST00000395097.7
CDS CAA 90 bp CCCAGGGTGCAGATCTTCCTCAGTTCTACCAGGGCACCCAGGACCTaGGACTCGGTGGGCTCCAGAGCCTGTCCCTTACTCTGGTGGTCT +
Preference number: 6 (lower is better)
Translates to: PRVQIFLSSTRAPRT*DSVGSRACPLLWWS
Trigger: AGACCACCAGAGTAAGGGACAGGCTCTGGAGCCCACCGAGTCCAAGGTCCTGGGTGCCCTGGTAGAACTGAGGAAGATCTGCACCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS CCA 72 bp TCAGTTCTACCAGGGCACCCAGGACCTTGGACTCGGTaGGCTCCAGAGCCTGTCCCTTACTCTGGTGGTCTT +
Preference number: 6 (lower is better)
Translates to: SVLPGHPGPWTR*APEPVPYSGGL
Trigger: AAGACCACCAGAGTAAGGGACAGGCTCTGGAGCCCACCGAGTCCAAGGTCCTGGGTGCCCTGGTAGAACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS CAA 72 bp CAGATCTTCCTCAGTTCTACCAGGGCACCCAGGACCTaGGACTCGGTGGGCTCCAGAGCCTGTCCCTTACTC +
Preference number: 6 (lower is better)
Translates to: QIFLSSTRAPRT*DSVGSRACPLL
Trigger: GAGTAAGGGACAGGCTCTGGAGCCCACCGAGTCCAAGGTCCTGGGTGCCCTGGTAGAACTGAGGAAGATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS CAA 90 bp GTATGTCTGCGCCGCATAACTGGAACCTGGAGGGGAAGGGCTATATaGGGCTTGGACGCAGGGCATATCTGGAGGGTATCTTGCGCGCTG +
Preference number: 6 (lower is better)
Translates to: VCLRRITGTWRGRAI*GLDAGHIWRVSCAL
Trigger: CAGCGCGCAAGATACCCTCCAGATATGCCCTGCGTCCAAGCCCAATATAGCCCTTCCCCTCCAGGTTCCAGTTATGCGGCGCAGACATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338488.8
ENST00000395097.7
CDS CCA 72 bp TTCCGAGCTGTATGTCTGCGCCGCATAACTGGAACCTaGAGGGGAAGGGCTATATTGGGCTTGGACGCAGGG +
Preference number: 6 (lower is better)
Translates to: FRAVCLRRITGT*RGRAILGLDAG
Trigger: CCCTGCGTCCAAGCCCAATATAGCCCTTCCCCTCCAGGTTCCAGTTATGCGGCGCAGACATACAGCTCGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330847.1
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS CCA 72 bp AGATCTTCCTCAGTTCTACCAGGGCACCCAGGACCTTaGACTCGGTGGGCTCCAGAGCCTGTCCCTTACTCT +
Preference number: 6 (lower is better)
Translates to: RSSSVLPGHPGP*TRWAPEPVPYS
Trigger: AGAGTAAGGGACAGGCTCTGGAGCCCACCGAGTCCAAGGTCCTGGGTGCCCTGGTAGAACTGAGGAAGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS TCA 72 bp TCAAGGGCCGCTGCATTTGGTACACGCAGGAAGGCTTaGGTTCGTAGTTGCTCGAGTAGCCCTCCACGAAGG +
Preference number: 6 (lower is better)
Translates to: SRAAAFGTRRKA*VRSCSSSPPRR
Trigger: CCTTCGTGGAGGGCTACTCGAGCAACTACGAACTCAAGCCTTCCTGCGTGTACCAAATGCAGCGGCCCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330847.1
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS CAA 72 bp CGCCGCATAACTGGAACCTGGAGGGGAAGGGCTATATaGGGCTTGGACGCAGGGCATATCTGGAGGGTATCT +
Preference number: 6 (lower is better)
Translates to: RRITGTWRGRAI*GLDAGHIWRVS
Trigger: AGATACCCTCCAGATATGCCCTGCGTCCAAGCCCAATATAGCCCTTCCCCTCCAGGTTCCAGTTATGCGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338488.8
ENST00000395097.7
CDS CAA 72 bp ATAACTGGAACCTGGAGGGGAAGGGCTATATTGGGCTaGGACGCAGGGCATATCTGGAGGGTATCTTGCGCG +
Preference number: 6 (lower is better)
Translates to: ITGTWRGRAILG*DAGHIWRVSCA
Trigger: CGCGCAAGATACCCTCCAGATATGCCCTGCGTCCAAGCCCAATATAGCCCTTCCCCTCCAGGTTCCAGTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338488.8
ENST00000395097.7
CDS TCA 72 bp CAAGGTCCATGGTCAGCTTGGTGTAGTCGGGGTTCATaGTCTCCGTGGTGTATTCCGAGCTGTATGTCTGCG +
Preference number: 6 (lower is better)
Translates to: QGPWSAWCSRGS*SPWCIPSCMSA
Trigger: CGCAGACATACAGCTCGGAATACACCACGGAGATCATGAACCCCGACTACACCAAGCTGACCATGGACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330847.1
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS CCA 72 bp TGGTGTATTCCGAGCTGTATGTCTGCGCCGCATAACTaGAACCTGGAGGGGAAGGGCTATATTGGGCTTGGA +
Preference number: 6 (lower is better)
Translates to: WCIPSCMSAPHN*NLEGKGYIGLG
Trigger: TCCAAGCCCAATATAGCCCTTCCCCTCCAGGTTCCAGTTATGCGGCGCAGACATACAGCTCGGAATACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330847.1
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS CAA 72 bp CGCCGCATAACTGGAACCTGGAGGGGAAGGGCTATATaGGGCTTGGACGCAGGGCATATCCACATTTCCAAA +
Preference number: 6 (lower is better)
Translates to: RRITGTWRGRAI*GLDAGHIHISK
Trigger: TTTGGAAATGTGGATATGCCCTGCGTCCAAGCCCAATATAGCCCTTCCCCTCCAGGTTCCAGTTATGCGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330847.1
ENST00000618101.4
CDS TCA 72 bp ATAGAGTCGAGCCACTCCCCAAATCCACGAAGGCACTaGAGTCGATGCAGGACAAGTCCATTGCAGAACACA +
Preference number: 6 (lower is better)
Translates to: IESSHSPNPRRH*SRCRTSPLQNT
Trigger: TGTGTTCTGCAATGGACTTGTCCTGCATCGACTTCAGTGCCTTCGTGGATTTGGGGAGTGGCTCGACTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS CAA 72 bp GGATACATCAATGGAGGCTGTCAGGAGGTTGTAGAATaGTTGCACATGCTCAGCATCTGTGCCTGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: GYINGGCQEVVE*LHMLSICACSS
Trigger: GCTGCTGCAGGCACAGATGCTGAGCATGTGCAACAATTCTACAACCTCCTGACAGCCTCCATTGATGTATCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS CCA 72 bp TTGGACTCGGTGGGCTCCAGAGCCTGTCCCTTACTCTaGTGGTCTTTTAAACTGCTTGTGATCTTGTTGCAT +
Preference number: 6 (lower is better)
Translates to: LDSVGSRACPLL*WSFKLLVILLH
Trigger: ATGCAACAAGATCACAAGCAGTTTAAAAGACCACCAGAGTAAGGGACAGGCTCTGGAGCCCACCGAGTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS CAA 90 bp GTGTTGAGTCTGTTAAAGCTCGGACAAGGGCATTCATCATGCAGATaGGAGGAGAAGGTGGAGAGGGCTGAGAAGGTTCCTGTTGTAATG +
Preference number: 6 (lower is better)
Translates to: VLSLLKLGQGHSSCR*EEKVERAEKVPVVM
Trigger: CATTACAACAGGAACCTTCTCAGCCCTCTCCACCTTCTCCTCCAATCTGCATGATGAATGCCCTTGTCCGAGCTTTAACAGACTCAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330847.1
ENST00000338488.8
ENST00000395097.7
ENST00000618101.4
CDS CAA 72 bp ATAACTGGAACCTGGAGGGGAAGGGCTATATTGGGCTaGGACGCAGGGCATATCCACATTTCCAAATCTGAT +
Preference number: 6 (lower is better)
Translates to: ITGTWRGRAILG*DAGHIHISKSD
Trigger: ATCAGATTTGGAAATGTGGATATGCCCTGCGTCCAAGCCCAATATAGCCCTTCCCCTCCAGGTTCCAGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330847.1
ENST00000618101.4
CDS CAA 90 bp CCTGGTCAGTGGGACAGTATCTGGAATAATCAAGATCTCTGGGTGTaGAGTCTGTTAAAGCTCGGACAAGGGCATTCATCATGCAGATTG +
Preference number: 6 (lower is better)
Translates to: PGQWDSIWNNQDLWV*SLLKLGQGHSSCRL
Trigger: CAATCTGCATGATGAATGCCCTTGTCCGAGCTTTAACAGACTCAACACCCAGAGATCTTGATTATTCCAGATACTGTCCCACTGACCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS GCA 72 bp TTCTTTGGGGAGATCAGTAAATCCCGGAATCTTTTCTaGCCAGCTTCTGGATACATCAATGGAGGCTGTCAG +
Preference number: 6 (lower is better)
Translates to: FFGEISKSRNLF*PASGYINGGCQ
Trigger: CTGACAGCCTCCATTGATGTATCCAGAAGCTGGGCAGAAAAGATTCCGGGATTTACTGATCTCCCCAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS CCA 72 bp CCGGAATCTTTTCTGCCCAGCTTCTGGATACATCAATaGAGGCTGTCAGGAGGTTGTAGAATTGTTGCACAT +
Preference number: 6 (lower is better)
Translates to: PESFLPSFWIHQ*RLSGGCRIVAH
Trigger: ATGTGCAACAATTCTACAACCTCCTGACAGCCTCCATTGATGTATCCAGAAGCTGGGCAGAAAAGATTCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS CCA 72 bp GTGATCATGCTCAGTGCTGACAGGCAGGCTAAGGCTTaGATATCAAGGTTCAGGCTCTGCAAATTTAAGGAA +
Preference number: 6 (lower is better)
Translates to: VIMLSADRQAKA*ISRFRLCKFKE
Trigger: TTCCTTAAATTTGCAGAGCCTGAACCTTGATATCCAAGCCTTAGCCTGCCTGTCAGCACTGAGCATGATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS TCA 72 bp CCTGTCCCTTACTCTGGTGGTCTTTTAAACTGCTTGTaGTCTTGTTGCATAGCTCTTCGACTCTCTTTGGTT +
Preference number: 6 (lower is better)
Translates to: PVPYSGGLLNCL*SCCIALRLSLV
Trigger: AACCAAAGAGAGTCGAAGAGCTATGCAACAAGATCACAAGCAGTTTAAAAGACCACCAGAGTAAGGGACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS CAA 72 bp TGGGACAGTATCTGGAATAATCAAGATCTCTGGGTGTaGAGTCTGTTAAAGCTCGGACAAGGGCATTCATCA +
Preference number: 6 (lower is better)
Translates to: WDSIWNNQDLWV*SLLKLGQGHSS
Trigger: TGATGAATGCCCTTGTCCGAGCTTTAACAGACTCAACACCCAGAGATCTTGATTATTCCAGATACTGTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS CAA 90 bp AGAGCCTGTCCCTTACTCTGGTGGTCTTTTAAACTGCTTGTGATCTaGTTGCATAGCTCTTCGACTCTCTTTGGTTCTTTTAACCCATGT +
Preference number: 6 (lower is better)
Translates to: RACPLLWWSFKLLVI*LHSSSTLFGSFNPC
Trigger: ACATGGGTTAAAAGAACCAAAGAGAGTCGAAGAGCTATGCAACAAGATCACAAGCAGTTTAAAAGACCACCAGAGTAAGGGACAGGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS CAA 72 bp CCCTTACTCTGGTGGTCTTTTAAACTGCTTGTGATCTaGTTGCATAGCTCTTCGACTCTCTTTGGTTCTTTT +
Preference number: 6 (lower is better)
Translates to: PLLWWSFKLLVI*LHSSSTLFGSF
Trigger: AAAAGAACCAAAGAGAGTCGAAGAGCTATGCAACAAGATCACAAGCAGTTTAAAAGACCACCAGAGTAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4
CDS TCA 72 bp AACAGCTCCAAAAAGGCTGATTCAATAAGTAATGTCTaGTCTTCTTTGGGGAGATCAGTAAATCCCGGAATC +
Preference number: 6 (lower is better)
Translates to: NSSKKADSISNV*SSLGRSVNPGI
Trigger: GATTCCGGGATTTACTGATCTCCCCAAAGAAGATCAGACATTACTTATTGAATCAGCCTTTTTGGAGCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330847.1
ENST00000395097.7
ENST00000618101.4