RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NR3C2 (Homo sapiens)

Ensembl gene IDs: ENSG00000151623

Ensembl transcript IDs: ENST00000342437.8, ENST00000344721.8, ENST00000358102.8, ENST00000503174.1, ENST00000503313.1, ENST00000504753.1, ENST00000511528.1, ENST00000512865.5, ENST00000625323.2

Found 884 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGACTGAACCTTGCCAAGATGGGCCGTCCCAGCGCATCCTGCCATaGTCTGTGCGTTCCTGTGACCGGTTCCAGGAGTGCAGAACCTCT +
Preference number: 1 (lower is better)
Translates to: QTEPCQDGPSQRILP*SVRSCDRFQECRTS
Trigger: AGAGGTTCTGCACTCCTGGAACCGGTCACAGGAACGCACAGATCATGGCAGGATGCGCTGGGACGGCCCATCTTGGCAAGGTTCAGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
3UTR GCA 90 bp CGACTCCACCTTGGGCAGCTGGTCGCTGATGATCTCCACCAGCATTaGGGGGAACTCTACCTTCAGCGCATGGGACTCTCGGAAGGTGTA +
Preference number: 1 (lower is better)
Translates to: RLHLGQLVADDLHQH*GELYLQRMGLSEGV
Trigger: TACACCTTCCGAGAGTCCCATGCGCTGAAGGTAGAGTTCCCCGCAATGCTGGTGGAGATCATCAGCGACCAGCTGCCCAAGGTGGAGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342437.8
3UTR TCA 90 bp AGATGGGCCGTCCCAGCGCATCCTGCCATGATCTGTGCGTTCCTGTaGCCGGTTCCAGGAGTGCAGAACCTCTTTCCAAGATCAGAAGGG +
Preference number: 1 (lower is better)
Translates to: RWAVPAHPAMICAFL*PVPGVQNLFPRSEG
Trigger: CCCTTCTGATCTTGGAAAGAGGTTCTGCACTCCTGGAACCGGTCACAGGAACGCACAGATCATGGCAGGATGCGCTGGGACGGCCCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
3UTR GCA 90 bp CCAGTGATGCAGAAGACCGTGGACGAGCGAGGGCTCAGAGGCAGCTaGTGCCCCACGCCACGAGTTCTGTTATTACACAACAGGAATCTG +
Preference number: 1 (lower is better)
Translates to: PVMQKTVDERGLRGS*CPTPRVLLLHNRNL
Trigger: CAGATTCCTGTTGTGTAATAACAGAACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCCTCGCTCGTCCACGGTCTTCTGCATCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR GCA 90 bp AACCTTGCCAAGATGGGCCGTCCCAGCGCATCCTGCCATGATCTGTaGGTTCCTGTGACCGGTTCCAGGAGTGCAGAACCTCTTTCCAAG +
Preference number: 1 (lower is better)
Translates to: NLAKMGRPSASCHDL*VPVTGSRSAEPLSK
Trigger: CTTGGAAAGAGGTTCTGCACTCCTGGAACCGGTCACAGGAACGCACAGATCATGGCAGGATGCGCTGGGACGGCCCATCTTGGCAAGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
3UTR GCA 90 bp CCATTCAGACTGAACCTTGCCAAGATGGGCCGTCCCAGCGCATCCTaGCATGATCTGTGCGTTCCTGTGACCGGTTCCAGGAGTGCAGAA +
Preference number: 1 (lower is better)
Translates to: PFRLNLAKMGRPSAS*HDLCVPVTGSRSAE
Trigger: TTCTGCACTCCTGGAACCGGTCACAGGAACGCACAGATCATGGCAGGATGCGCTGGGACGGCCCATCTTGGCAAGGTTCAGTCTGAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
3UTR TCA 90 bp AGCTGCAGCACTCCAAGGACCTCCTCTCCCACATGTGTTGTCAAATaGCACCTTCCAGGAGCTGCAGACACCGCAGTGTGTCATTCCCCG +
Preference number: 1 (lower is better)
Translates to: SCSTPRTSSPTCVVK*HLPGAADTAVCHSP
Trigger: CGGGGAATGACACACTGCGGTGTCTGCAGCTCCTGGAAGGTGTCATTTGACAACACATGTGGGAGAGGAGGTCCTTGGAGTGCTGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
3UTR GCA 90 bp GTGATGCAGAAGACCGTGGACGAGCGAGGGCTCAGAGGCAGCTGCTaGCCCACGCCACGAGTTCTGTTATTACACAACAGGAATCTGTAT +
Preference number: 1 (lower is better)
Translates to: VMQKTVDERGLRGSC*PTPRVLLLHNRNLY
Trigger: ATACAGATTCCTGTTGTGTAATAACAGAACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCCTCGCTCGTCCACGGTCTTCTGCATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR CCA 90 bp ATTCCAGCAGGTCGCTCACCAGGTCATGCATGGAGTCCAGCAGCTTaGTCAGTTGGTAGAACCTCTGCCAGCTCTGCCCAGAATTGTTGG +
Preference number: 1 (lower is better)
Translates to: IPAGRSPGHAWSPAA*SVGRTSASSAQNCW
Trigger: CCAACAATTCTGGGCAGAGCTGGCAGAGGTTCTACCAACTGACCAAGCTGCTGGACTCCATGCATGACCTGGTGAGCGACCTGCTGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342437.8
3UTR TCA 90 bp TCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTaGCATGACTTTAAACTTGAGAAACTGTTGAACAAGTGTGAATCA +
Preference number: 1 (lower is better)
Translates to: SRQIHGKTAFPAPNL*HDFKLEKLLNKCES
Trigger: TGATTCACACTTGTTCAACAGTTTCTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR TCA 90 bp CCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGCCGTCCCAGCGCACCCGATGGAGCAGGATaGAGCAGAAGCCAGAAAACG +
Preference number: 2 (lower is better)
Translates to: PVSMPFRLNLAKMGRPSAPDGAG*SRSQKT
Trigger: CGTTTTCTGGCTTCTGCTTCATCCTGCTCCATCGGG...TGCGCTGGGACGGCCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
3UTR-3UTR GCA 90 bp CCAGAAAACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAGGGCTCAGAGGCAGCTaGTGCCCCACGCCACGAGTT +
Preference number: 2 (lower is better)
Translates to: PENVLESHKCPKRETKNKGLRGS*CPTPRV
Trigger: AACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCC...TTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGTTTTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR GCA 90 bp CCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGCCGTCCCAGCGCACAGCTTTCCCAAAGCTaGAGCACTCCAAGGACCTCC +
Preference number: 2 (lower is better)
Translates to: PVSMPFRLNLAKMGRPSAQLSQS*STPRTS
Trigger: GGAGGTCCTTGGAGTGCTGCAGCTTTGGGAAAGCTG...TGCGCTGGGACGGCCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
3UTR-3UTR GCA 90 bp CTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGGGGCTCAGAGGCAGCTaGTGCCCCACGCCACGAGTT +
Preference number: 2 (lower is better)
Translates to: LDMAFHPEEQEHVSKRWGGLRGS*CPTPRV
Trigger: AACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCC...CCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAG
57% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR GCA 90 bp ACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGCTGGAGTCCCACAAATaGCCCAAGCGGGAGACCAAG +
Preference number: 2 (lower is better)
Translates to: TPLSPGLHAIQTEPCQDGLESHK*PKRETK
Trigger: CTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAG...CCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
3UTR-3UTR CCA 90 bp GGGATTGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGACTGGGGGATTGGAGGTaGGGAATCCTTCAGACTGCT +
Preference number: 2 (lower is better)
Translates to: GIGGGESFRLLWSRQIHGLGDWR*GILQTA
Trigger: AGCAGTCTGAAGGATTCCCCACCTCCAATCCCCCAG...TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCAATCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR GCA 90 bp GGGATTGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAACCTCTGCCAGCTCTaGCCAGAATTGTTGGGACAC +
Preference number: 2 (lower is better)
Translates to: GIGGGESFRLLWSRQIHGNLCQL*PELLGH
Trigger: GTGTCCCAACAATTCTGGGCAGAGCTGGCAGAGGTT...TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCAATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342437.8
3UTR-3UTR CCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCCTGGGGGATTGGAGGTaGGGAATCCTTCAGACTGCT +
Preference number: 2 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSLGDWR*GILQTA
Trigger: AGCAGTCTGAAGGATTCCCCACCTCCAATCCCCCAG...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR CAA 90 bp TTTCCCAAAGCTGCAGCACTCCAAGGACCTCCTCTCCCACATGTGTaGTCAAATGACACCTTCCAGGAGCTGCAGACACCGCAGTGTGTC +
Preference number: 2 (lower is better)
Translates to: FPKAAALQGPPLPHV*SNDTFQELQTPQCV
Trigger: GACACACTGCGGTGTCTGCAGCTCCTGGAAGGTGTCATTTGACAACACATGTGGGAGAGGAGGTCCTTGGAGTGCTGCAGCTTTGGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
3UTR-3UTR GCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGGGGAATCCTTCAGACTaGTCTGGTCTCGCCAAATCC +
Preference number: 2 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLGNPSD*SGLAKS
Trigger: GGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR TCA 90 bp GAGGGCTCAGAGGCAGCTGCTGCCCCACGCCACGAGTTCTGTTATTACACAACACCGGCTCCAAACCTCTaGCATGACTTTAAACTTGAG +
Preference number: 2 (lower is better)
Translates to: EGSEAAAAPRHEFCYYTTPAPNL*HDFKLE
Trigger: CTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGG...TGTTGTGTAATAACAGAACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR TCA 90 bp CCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGCCGTCCCAGCGCAACGTTCGTTAGTCCTTaGACCCTTTTAAAACAAGCG +
Preference number: 2 (lower is better)
Translates to: PVSMPFRLNLAKMGRPSATFVSP*TLLKQA
Trigger: CGCTTGTTTTAAAAGGGTTCAAGGACTAACGAACGT...TGCGCTGGGACGGCCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
3UTR-3UTR GCA 90 bp CCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGCCGTCCCAGCGCAAATGGGAGGAAAAGATaGTCTCTGAGCCATCAAGTT +
Preference number: 2 (lower is better)
Translates to: PVSMPFRLNLAKMGRPSANGRKR*SLSHQV
Trigger: AACTTGATGGCTCAGAGAGCATCTTTTCCTCCCATT...TGCGCTGGGACGGCCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
3UTR-3UTR CCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGGGGTCCTTCTGGGTGTaGAACAACACAGGGAAACTT +
Preference number: 2 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLGSFWV*NNTGKL
Trigger: AAGTTTCCCTGTGTTGTTCCACACCCAGAAGGACCC...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR CCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCGGGTCCTTCTGGGTGTaGAACAACACAGGGAAACTT +
Preference number: 2 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSGSFWV*NNTGKL
Trigger: AAGTTTCCCTGTGTTGTTCCACACCCAGAAGGACCC...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR CCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCTTTCTTGGGTCCTTCTaGGTGTGGAACAACACAGGG +
Preference number: 2 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSFLGSF*VWNNTG
Trigger: CCCTGTGTTGTTCCACACCCAGAAGGACCCAAGAAA...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR CCA 90 bp TGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTTCCTTCAGACTGCTCTaGTCTCGCCAAATCCACGGA +
Preference number: 2 (lower is better)
Translates to: CSGLAKSTEKQLSRLQTSSFRLL*SRQIHG
Trigger: TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGA...AGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR CCA 90 bp CCAGAAAACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAATTTCTTGGGTCCTTCTaGGTGTGGAACAACACAGGG +
Preference number: 2 (lower is better)
Translates to: PENVLESHKCPKRETKNKFLGSF*VWNNTG
Trigger: CCCTGTGTTGTTCCACACCCAGAAGGACCCAAGAAA...TTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGTTTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR CCA 90 bp CTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATTTCTTGGGTCCTTCTaGGTGTGGAACAACACAGGG +
Preference number: 2 (lower is better)
Translates to: LVSPNPRKNSFPGSKPLTFLGSF*VWNNTG
Trigger: CCCTGTGTTGTTCCACACCCAGAAGGACCCAAGAAA...TGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR CCA 90 bp ACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAACAAAAACTGGGGGATTGGAGGTaGGGAATCCTTCAGACTGCT +
Preference number: 2 (lower is better)
Translates to: TCWSPTNAPSGRPRTKQKLGDWR*GILQTA
Trigger: AGCAGTCTGAAGGATTCCCCACCTCCAATCCCCCAG...TTTTTGTTTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR CCA 90 bp AAGATGCTCTCTGAGCCATCAAGTTCCCAGTCTCACTCTCGTAGAGCTGGTTCTCTGGGGGATTGGAGGTaGGGAATCCTTCAGACTGCT +
Preference number: 2 (lower is better)
Translates to: KMLSEPSSSQSHSRRAGSLGDWR*GILQTA
Trigger: AGCAGTCTGAAGGATTCCCCACCTCCAATCCCCCAG...AGAACCAGCTCTACGAGAGTGAGACTGGGAACTTGATGGCTCAGAGAGCATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
3UTR-3UTR TCA 90 bp CCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGCCGTCCCAGCGCAAACTTGAGAAACTGTTaGACAAGTGTGAATCAACCA +
Preference number: 2 (lower is better)
Translates to: PVSMPFRLNLAKMGRPSANLRNC*TSVNQP
Trigger: TGGTTGATTCACACTTGTTCAACAGTTTCTCAAGTT...TGCGCTGGGACGGCCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
3UTR-3UTR TCA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATCCGGCTCCAAACCTCTaGCATGACTTTAAACTTGAG +
Preference number: 2 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNPAPNL*HDFKLE
Trigger: CTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGG...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR TCA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACCCGGCTCCAAACCTCTaGCATGACTTTAAACTTGAG +
Preference number: 2 (lower is better)
Translates to: WRWGILQTALVSPNPRKNPAPNL*HDFKLE
Trigger: CTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGG...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR TCA 90 bp GAGGGCTCAGAGGCAGCTGCTGCCCCACGCCACGAGTTCTGTTATTACACAACAACGTTCGTTAGTCCTTaGACCCTTTTAAAACAAGCG +
Preference number: 2 (lower is better)
Translates to: EGSEAAAAPRHEFCYYTTTFVSP*TLLKQA
Trigger: CGCTTGTTTTAAAAGGGTTCAAGGACTAACGAACGT...TGTTGTGTAATAACAGAACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR TCA 90 bp CTAAAACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGGGAAAAGATGCTCTCTaGGCCATCAAGTTCCCAGTC +
Preference number: 2 (lower is better)
Translates to: LKPLYLPVSMPFRLNLAKGKDAL*AIKFPV
Trigger: GACTGGGAACTTGATGGCTCAGAGAGCATCTTTTCC...CTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGTTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
3UTR-3UTR GCA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACCCTCATTTCTTCAAATaGAGCCTGGCTTTTGAGGCC +
Preference number: 2 (lower is better)
Translates to: WRWGILQTALVSPNPRKNPHFFK*SLAFEA
Trigger: GGCCTCAAAAGCCAGGCTGCATTTGAAGAAATGAGG...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000342437.8
3UTR-3UTR CCA 90 bp GAGGGCTCAGAGGCAGCTGCTGCCCCACGCCACGAGTTCTGTTATTACACAACAAAAAACAGGTTTTCTTaGGTCCTTCTGGGTGTGGAA +
Preference number: 2 (lower is better)
Translates to: EGSEAAAAPRHEFCYYTTKNRFS*VLLGVE
Trigger: TTCCACACCCAGAAGGACCCAAGAAAACCTGTTTTT...TGTTGTGTAATAACAGAACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCCTC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR CCA 90 bp GGGATTGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAAACAGGTTTTCTTaGGTCCTTCTGGGTGTGGAA +
Preference number: 2 (lower is better)
Translates to: GIGGGESFRLLWSRQIHGKNRFS*VLLGVE
Trigger: TTCCACACCCAGAAGGACCCAAGAAAACCTGTTTTT...TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCAATCCC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR CCA 90 bp ACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAACAAAAATCCTTCAGACTGCTCTaGTCTCGCCAAATCCACGGA +
Preference number: 2 (lower is better)
Translates to: TCWSPTNAPSGRPRTKQKSFRLL*SRQIHG
Trigger: TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGA...TTTTTGTTTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR CCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGTCTTCAAATGCAGCCTaGCTTTTGAGGCCATCCTTT +
Preference number: 2 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLSSNAA*LLRPSF
Trigger: AAAGGATGGCCTCAAAAGCCAGGCTGCATTTGAAGA...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342437.8
3UTR-3UTR TCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCACGTTCGTTAGTCCTTaGACCCTTTTAAAACAAGCG +
Preference number: 2 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSTFVSP*TLLKQA
Trigger: CGCTTGTTTTAAAAGGGTTCAAGGACTAACGAACGT...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR GCA 90 bp AAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTGGGCTCAGAGGCAGCTaGTGCCCCACGCCACGAGTT +
Preference number: 2 (lower is better)
Translates to: KGFKTTEEVSVWLFTTETGLRGS*CPTPRV
Trigger: AACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCC...AGTCTCTGTTGTAAATAACCACACTGAAACCTCTTCGGTTGTCTTGAAACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR CCA 90 bp TGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTAAAAACAGGTTTTCTTaGGTCCTTCTGGGTGTGGAA +
Preference number: 2 (lower is better)
Translates to: CSGLAKSTEKQLSRLQTSKNRFS*VLLGVE
Trigger: TTCCACACCCAGAAGGACCCAAGAAAACCTGTTTTT...AGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR CCA 90 bp TCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGTCCTTCAGACTGCTCTaGTCTCGCCAAATCCACGGA +
Preference number: 2 (lower is better)
Translates to: STEKQLSRLQTSDMTLNLSFRLL*SRQIHG
Trigger: TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGA...CAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR GCA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACGATCTCCACCAGCATTaGGGGGAACTCTACCTTCAG +
Preference number: 2 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNDLHQH*GELYLQ
Trigger: CTGAAGGTAGAGTTCCCCGCAATGCTGGTGGAGATC...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000342437.8
3UTR-3UTR CCA 90 bp TCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGTTTCTTGGGTCCTTCTaGGTGTGGAACAACACAGGG +
Preference number: 2 (lower is better)
Translates to: STEKQLSRLQTSDMTLNLFLGSF*VWNNTG
Trigger: CCCTGTGTTGTTCCACACCCAGAAGGACCCAAGAAA...CAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR CCA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCAAAAACAGGTTTTCTTaGGTCCTTCTGGGTGTGGAA +
Preference number: 2 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSKNRFS*VLLGVE
Trigger: TTCCACACCCAGAAGGACCCAAGAAAACCTGTTTTT...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR TCA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGACTGTTGAACAAGTGTaGATCAACCATCACATGTTA +
Preference number: 2 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGTVEQV*INHHML
Trigger: TAACATGTGATGGTTGATTCACACTTGTTCAACAGT...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR TCA 90 bp TGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTACTGTTGAACAAGTGTaGATCAACCATCACATGTTA +
Preference number: 2 (lower is better)
Translates to: CSGLAKSTEKQLSRLQTSTVEQV*INHHML
Trigger: TAACATGTGATGGTTGATTCACACTTGTTCAACAGT...AGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR TCA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATACTGTTGAACAAGTGTaGATCAACCATCACATGTTA +
Preference number: 2 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNTVEQV*INHHML
Trigger: TAACATGTGATGGTTGATTCACACTTGTTCAACAGT...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR TCA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATAACTTGAGAAACTGTTaGACAAGTGTGAATCAACCA +
Preference number: 2 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNNLRNC*TSVNQP
Trigger: TGGTTGATTCACACTTGTTCAACAGTTTCTCAAGTT...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR TCA 90 bp CTGCATGCTGTGTATTTATTACCTTCAAAGTGTGGCTTTCATATTACTGTGCACATCTGTGCGTTCCTGTaGCCGGTTCCAGGAGTGCAG +
Preference number: 2 (lower is better)
Translates to: LHAVYLLPSKCGFHITVHICAFL*PVPGVQ
Trigger: CTGCACTCCTGGAACCGGTCACAGGAACGCACAGAT...GTGCACAGTAATATGAAAGCCACACTTTGAAGGTAATAAATACACAGCATGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
3UTR-3UTR TCA 90 bp CTGCATGCTGTGTATTTATTACCTTCAAAGTGTGGCTTTCATATTACTGTGCACCAGCGCATCCTGCCATaGTCTGTGCGTTCCTGTGAC +
Preference number: 2 (lower is better)
Translates to: LHAVYLLPSKCGFHITVHQRILP*SVRSCD
Trigger: GTCACAGGAACGCACAGATCATGGCAGGATGCGCTG...GTGCACAGTAATATGAAAGCCACACTTTGAAGGTAATAAATACACAGCATGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
3UTR-3UTR GCA 90 bp TCAGAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTCGCTCACCAGGTCATaGATGGAGTCCAGCAGCTTG +
Preference number: 2 (lower is better)
Translates to: SELLTRYGFSSRGTGTCFSLTRS*MESSSL
Trigger: CAAGCTGCTGGACTCCATGCATGACCTGGTGAGCGA...GAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAGTCAATAACTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342437.8
3UTR-3UTR CCA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACGGGTCCTTCTGGGTGTaGAACAACACAGGGAAACTT +
Preference number: 2 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNGSFWV*NNTGKL
Trigger: AAGTTTCCCTGTGTTGTTCCACACCCAGAAGGACCC...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR CCA 90 bp TTTGGACTGGGACAGGCATTCAACAGTGAATTTAGAATATGGCTTTGCTGTTTAGCTTCCTCGTGGCCATaGGCTTCTCCAGCTACAGCT +
Preference number: 2 (lower is better)
Translates to: FGLGQAFNSEFRIWLCCLASSWP*ASPATA
Trigger: AGCTGTAGCTGGAGAAGCCCATGGCCACGAGGAAGC...TAAACAGCAAAGCCATATTCTAAATTCACTGTTGAATGCCTGTCCCAGTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
3UTR-3UTR TCA 90 bp CTAAAACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGACTGTTGAACAAGTGTaGATCAACCATCACATGTTA +
Preference number: 2 (lower is better)
Translates to: LKPLYLPVSMPFRLNLAKTVEQV*INHHML
Trigger: TAACATGTGATGGTTGATTCACACTTGTTCAACAGT...CTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGTTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
3UTR-3UTR TCA 90 bp ACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGACCGGCTCCAAACCTCTaGCATGACTTTAAACTTGAG +
Preference number: 2 (lower is better)
Translates to: TEKQLSRLQTSDMTLNLRPAPNL*HDFKLE
Trigger: CTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGG...TCTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR GCA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTGGGAATCCTTCAGACTaGTCTGGTCTCGCCAAATCC +
Preference number: 2 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVGNPSD*SGLAKS
Trigger: GGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR GCA 90 bp TTTGGACTGGGACAGGCATTCAACAGTGAATTTAGAATATGGCTTTGCTGTTTACAGCTTTCCCAAAGCTaGAGCACTCCAAGGACCTCC +
Preference number: 2 (lower is better)
Translates to: FGLGQAFNSEFRIWLCCLQLSQS*STPRTS
Trigger: GGAGGTCCTTGGAGTGCTGCAGCTTTGGGAAAGCTG...TAAACAGCAAAGCCATATTCTAAATTCACTGTTGAATGCCTGTCCCAGTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
3UTR-3UTR GCA 90 bp CTGCATGCTGTGTATTTATTACCTTCAAAGTGTGGCTTTCATATTACTGTGCACTCCTGCCATGATCTGTaGGTTCCTGTGACCGGTTCC +
Preference number: 2 (lower is better)
Translates to: LHAVYLLPSKCGFHITVHSCHDL*VPVTGS
Trigger: GGAACCGGTCACAGGAACGCACAGATCATGGCAGGA...GTGCACAGTAATATGAAAGCCACACTTTGAAGGTAATAAATACACAGCATGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
3UTR-3UTR CCA 90 bp CTGCATGCTGTGTATTTATTACCTTCAAAGTGTGGCTTTCATATTACTGTGCACGGGTCCTTCTGGGTGTaGAACAACACAGGGAAACTT +
Preference number: 2 (lower is better)
Translates to: LHAVYLLPSKCGFHITVHGSFWV*NNTGKL
Trigger: AAGTTTCCCTGTGTTGTTCCACACCCAGAAGGACCC...GTGCACAGTAATATGAAAGCCACACTTTGAAGGTAATAAATACACAGCATGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
3UTR-3UTR CCA 90 bp AAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTGGGTCCTTCTGGGTGTaGAACAACACAGGGAAACTT +
Preference number: 2 (lower is better)
Translates to: KGFKTTEEVSVWLFTTETGSFWV*NNTGKL
Trigger: AAGTTTCCCTGTGTTGTTCCACACCCAGAAGGACCC...AGTCTCTGTTGTAAATAACCACACTGAAACCTCTTCGGTTGTCTTGAAACCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR CCA 90 bp CTGCATGCTGTGTATTTATTACCTTCAAAGTGTGGCTTTCATATTACTGTGCACTTTCTTGGGTCCTTCTaGGTGTGGAACAACACAGGG +
Preference number: 2 (lower is better)
Translates to: LHAVYLLPSKCGFHITVHFLGSF*VWNNTG
Trigger: CCCTGTGTTGTTCCACACCCAGAAGGACCCAAGAAA...GTGCACAGTAATATGAAAGCCACACTTTGAAGGTAATAAATACACAGCATGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
3UTR-3UTR CCA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACAAAAACAGGTTTTCTTaGGTCCTTCTGGGTGTGGAA +
Preference number: 2 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNKNRFS*VLLGVE
Trigger: TTCCACACCCAGAAGGACCCAAGAAAACCTGTTTTT...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR TCA 90 bp ACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGAACTGTTGAACAAGTGTaGATCAACCATCACATGTTA +
Preference number: 2 (lower is better)
Translates to: TEKQLSRLQTSDMTLNLRTVEQV*INHHML
Trigger: TAACATGTGATGGTTGATTCACACTTGTTCAACAGT...TCTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR TCA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACAACTTGAGAAACTGTTaGACAAGTGTGAATCAACCA +
Preference number: 2 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNNLRNC*TSVNQP
Trigger: TGGTTGATTCACACTTGTTCAACAGTTTCTCAAGTT...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR TCA 90 bp AGAATATTAATGCCCCATATTGACTATACGTTTTATGTGCAAACCAAGGGTAAGATGCAGCCTGGCTTTTaGGGCCATCCTTTGGAATTG +
Preference number: 2 (lower is better)
Translates to: RILMPHIDYTFYVQTKGKMQPGF*GHPLEL
Trigger: CAATTCCAAAGGATGGCCTCAAAAGCCAGGCTGCAT...CTTACCCTTGGTTTGCACATAAAACGTATAGTCAATATGGGGCATTAATATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000342437.8
3UTR-3UTR CCA 90 bp AGAATATTAATGCCCCATATTGACTATACGTTTTATGTGCAAACCAAGGGTAAGTGGAGTCCAGCAGCTTaGTCAGTTGGTAGAACCTCT +
Preference number: 2 (lower is better)
Translates to: RILMPHIDYTFYVQTKGKWSPAA*SVGRTS
Trigger: AGAGGTTCTACCAACTGACCAAGCTGCTGGACTCCA...CTTACCCTTGGTTTGCACATAAAACGTATAGTCAATATGGGGCATTAATATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342437.8
3UTR-3UTR TCA 90 bp TTTGGACTGGGACAGGCATTCAACAGTGAATTTAGAATATGGCTTTGCTGTTTAACGTTCGTTAGTCCTTaGACCCTTTTAAAACAAGCG +
Preference number: 2 (lower is better)
Translates to: FGLGQAFNSEFRIWLCCLTFVSP*TLLKQA
Trigger: CGCTTGTTTTAAAAGGGTTCAAGGACTAACGAACGT...TAAACAGCAAAGCCATATTCTAAATTCACTGTTGAATGCCTGTCCCAGTCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
3UTR-3UTR TCA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTAACTTGAGAAACTGTTaGACAAGTGTGAATCAACCA +
Preference number: 2 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVNLRNC*TSVNQP
Trigger: TGGTTGATTCACACTTGTTCAACAGTTTCTCAAGTT...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR GCA 90 bp AAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTGTAAACGGTTCATTATaGATGCAGGACATTGCACTT +
Preference number: 2 (lower is better)
Translates to: KGFKTTEEVSVWLFTTETVNGSL*MQDIAL
Trigger: AAGTGCAATGTCCTGCATGCATAATGAACCGTTTAC...AGTCTCTGTTGTAAATAACCACACTGAAACCTCTTCGGTTGTCTTGAAACCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR GCA 90 bp TTTGGACTGGGACAGGCATTCAACAGTGAATTTAGAATATGGCTTTGCTGTTTAAACTCCCAGTCTGCATaGTGTGTATTTATTACCTTC +
Preference number: 2 (lower is better)
Translates to: FGLGQAFNSEFRIWLCCLNSQSA*CVFITF
Trigger: GAAGGTAATAAATACACAGCATGCAGACTGGGAGTT...TAAACAGCAAAGCCATATTCTAAATTCACTGTTGAATGCCTGTCCCAGTCCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
3UTR-3UTR GCA 90 bp TCAGAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCCATCCTTTGGAATTGTaGTTAGTAGCAGCAAAACTT +
Preference number: 2 (lower is better)
Translates to: SELLTRYGFSSRGTGTCFHPLEL*LVAAKL
Trigger: AAGTTTTGCTGCTACTAAGCACAATTCCAAAGGATG...GAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAGTCAATAACTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342437.8
3UTR-3UTR CCA 90 bp CTGCATGCTGTGTATTTATTACCTTCAAAGTGTGGCTTTCATATTACTGTGCACCATATGTTTGTGATTTaGGGCAAGAGAAAAGCCATA +
Preference number: 2 (lower is better)
Translates to: LHAVYLLPSKCGFHITVHHMFVI*GKRKAI
Trigger: TATGGCTTTTCTCTTGCCCCAAATCACAAACATATG...GTGCACAGTAATATGAAAGCCACACTTTGAAGGTAATAAATACACAGCATGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
3UTR-3UTR GCA 90 bp TTTGGACTGGGACAGGCATTCAACAGTGAATTTAGAATATGGCTTTGCTGTTTACATACATTGCATCAGTaGCAAACAAACAGATTAATG +
Preference number: 2 (lower is better)
Translates to: FGLGQAFNSEFRIWLCCLHTLHQ*QTNRLM
Trigger: CATTAATCTGTTTGTTTGGCACTGATGCAATGTATG...TAAACAGCAAAGCCATATTCTAAATTCACTGTTGAATGCCTGTCCCAGTCCAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
3UTR-3UTR TCA 90 bp AGAATATTAATGCCCCATATTGACTATACGTTTTATGTGCAAACCAAGGGTAAGAACTTGAGAAACTGTTaGACAAGTGTGAATCAACCA +
Preference number: 2 (lower is better)
Translates to: RILMPHIDYTFYVQTKGKNLRNC*TSVNQP
Trigger: TGGTTGATTCACACTTGTTCAACAGTTTCTCAAGTT...CTTACCCTTGGTTTGCACATAAAACGTATAGTCAATATGGGGCATTAATATTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR CCA 72 bp AGCGGCTTGGCGTTCCCCGACTCCACCTTGGGCAGCTaGTCGCTGATGATCTCCACCAGCATTGCGGGGAAC +
Preference number: 3 (lower is better)
Translates to: SGLAFPDSTLGS*SLMISTSIAGN
Trigger: GTTCCCCGCAATGCTGGTGGAGATCATCAGCGACCAGCTGCCCAAGGTGGAGTCGGGGAACGCCAAGCCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342437.8
3UTR GCA 72 bp AAGACCGTGGACGAGCGAGGGCTCAGAGGCAGCTGCTaGCCCACGCCACGAGTTCTGTTATTACACAACAGG +
Preference number: 3 (lower is better)
Translates to: KTVDERGLRGSC*PTPRVLLLHNR
Trigger: CCTGTTGTGTAATAACAGAACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCCTCGCTCGTCCACGGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR GCA 72 bp AAGATGGGCCGTCCCAGCGCATCCTGCCATGATCTGTaGGTTCCTGTGACCGGTTCCAGGAGTGCAGAACCT +
Preference number: 3 (lower is better)
Translates to: KMGRPSASCHDL*VPVTGSRSAEP
Trigger: AGGTTCTGCACTCCTGGAACCGGTCACAGGAACGCACAGATCATGGCAGGATGCGCTGGGACGGCCCATCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
3UTR CCA 72 bp GGTCGCTCACCAGGTCATGCATGGAGTCCAGCAGCTTaGTCAGTTGGTAGAACCTCTGCCAGCTCTGCCCAG +
Preference number: 3 (lower is better)
Translates to: GRSPGHAWSPAA*SVGRTSASSAQ
Trigger: CTGGGCAGAGCTGGCAGAGGTTCTACCAACTGACCAAGCTGCTGGACTCCATGCATGACCTGGTGAGCGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342437.8
3UTR TCA 72 bp GTCCCAGCGCATCCTGCCATGATCTGTGCGTTCCTGTaGCCGGTTCCAGGAGTGCAGAACCTCTTTCCAAGA +
Preference number: 3 (lower is better)
Translates to: VPAHPAMICAFL*PVPGVQNLFPR
Trigger: TCTTGGAAAGAGGTTCTGCACTCCTGGAACCGGTCACAGGAACGCACAGATCATGGCAGGATGCGCTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
3UTR CCA 72 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTaGGGGATTGGAGGTGGGGAATCCTTCAGACTGCTC +
Preference number: 3 (lower is better)
Translates to: FHPEEQEHVSKR*GIGGGESFRLL
Trigger: GAGCAGTCTGAAGGATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR CAA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGAATGCAGCCTGGCTTTaGAGGCCATCCTTTGGAATT +
Preference number: 3 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLNAAWL*RPSFGI
Trigger: AATTCCAAAGGATGGCCTCAAAAGCCAGGCTGCATT...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342437.8
3UTR-3UTR CAA 90 bp TGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTCAGCTCTGCCCAGAATaGTTGGGACACTTAGTTACC +
Preference number: 3 (lower is better)
Translates to: CSGLAKSTEKQLSRLQTSQLCPE*LGHLVT
Trigger: GGTAACTAAGTGTCCCAACAATTCTGGGCAGAGCTG...AGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342437.8
3UTR-3UTR CAA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACCTCTGCCCAGAATTGTaGGGACACTTAGTTACCATC +
Preference number: 3 (lower is better)
Translates to: WRWGILQTALVSPNPRKNLCPEL*GHLVTI
Trigger: GATGGTAACTAAGTGTCCCAACAATTCTGGGCAGAG...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342437.8
3UTR-3UTR CAA 90 bp ACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGACTAAGCGCTGGGGGATaGGAGGTGGGGAATCCTTCA +
Preference number: 3 (lower is better)
Translates to: TEKQLSRLQTSDMTLNLRLSAGG*EVGNPS
Trigger: TGAAGGATTCCCCACCTCCAATCCCCCAGCGCTTAG...TCTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR CAA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTCTAAGCGCTGGGGGATaGGAGGTGGGGAATCCTTCA +
Preference number: 3 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVLSAGG*EVGNPS
Trigger: TGAAGGATTCCCCACCTCCAATCCCCCAGCGCTTAG...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR TCA 72 bp ATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTaGCATGACTTTAAACTTGAGAAACTGTTGAACAAG +
Preference number: 3 (lower is better)
Translates to: IHGKTAFPAPNL*HDFKLEKLLNK
Trigger: CTTGTTCAACAGTTTCTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR-3UTR CAA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTGGCCATCCTTTGGAATaGTGCTTAGTAGCAGCAAAA +
Preference number: 3 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVGHPLE*CLVAAK
Trigger: TTTTGCTGCTACTAAGCACAATTCCAAAGGATGGCC...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342437.8
3UTR GCA 72 bp GTAAGCCATTTGTTTGCTAGCAACTCCCAGTCTGCATaGTGTGTATTTATTACCTTCAAAGTGTGGCTTTCA +
Preference number: 3 (lower is better)
Translates to: VSHLFASNSQSA*CVFITFKVWLS
Trigger: TGAAAGCCACACTTTGAAGGTAATAAATACACAGCATGCAGACTGGGAGTTGCTAGCAAACAAATGGCTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGTCTCCCGGGCCCAATaGCACCCCGGGCGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGVSRAQ*HPGRGG
Trigger: CCCTCCGCGCCCGGGGTGTCATTGGGCCCGGGAGAC...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp GAGGGCTCAGAGGCAGCTGCTGCCCCACGCCACGAGTTCTGTTATTACACAACAGGGGGTGGGGGCTGCTaGTGCTGTGGCTGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: EGSEAAAAPRHEFCYYTTGGGGC*CCGCSS
Trigger: CGAGGAGCAGCCACAGCAGCAGCAGCCCCCACCCCC...TGTTGTGTAATAACAGAACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp GTAGAGCGGCTTGGCGTTCCCCGACTCCACCTTGGGCAGCTGGTCGCTGATGATAGGCAGCAACGCTCTTaGACCCAGGTGACTGACTGC +
Preference number: 4 (lower is better)
Translates to: VERLGVPRLHLGQLVADDRQQRS*TQVTDC
Trigger: GCAGTCAGTCACCTGGGTGCAAGAGCGTTGCTGCCT...ATCATCAGCGACCAGCTGCCCAAGGTGGAGTCGGGGAACGCCAAGCCGCTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342437.8
CDS-3UTR CCA 90 bp GAGGGCTCAGAGGCAGCTGCTGCCCCACGCCACGAGTTCTGTTATTACACAACACGTTGTCCCTTCCTCTaGGCTTTGCGGGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: EGSEAAAAPRHEFCYYTTRCPFL*ALRGWG
Trigger: CCCCCACCCCCGCAAAGCCCAGAGGAAGGGACAACG...TGTTGTGTAATAACAGAACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp AAGATGCTCTCTGAGCCATCAAGTTCCCAGTCTCACTCTCGTAGAGCTGGTTCTTCCCGCCGCCGCTGCTaGCGCCGCCACCAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: KMLSEPSSSQSHSRRAGSSRRRC*RRHQQV
Trigger: GACTTGCTGGTGGCGGCGGCAGCAGCGGCGGCGGGA...AGAACCAGCTCTACGAGAGTGAGACTGGGAACTTGATGGCTCAGAGAGCATCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344721.8
CDS-3UTR GCA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACATCCAGGCCAGCGAGTaGCGCTCTCCCTGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: WRWGILQTALVSPNPRKNIQASE*RSPCSG
Trigger: CCCGCTGCAGGGAGAGCGGCACTCGCTGGCCTGGAT...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342437.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp GTAGAGCGGCTTGGCGTTCCCCGACTCCACCTTGGGCAGCTGGTCGCTGATGATGTCAGAGGAGTTCCCTaGGTGATTGGGCTGTGCACT +
Preference number: 4 (lower is better)
Translates to: VERLGVPRLHLGQLVADDVRGVP*VIGLCT
Trigger: AGTGCACAGCCCAATCACCCAGGGAACTCCTCTGAC...ATCATCAGCGACCAGCTGCCCAAGGTGGAGTCGGGGAACGCCAAGCCGCTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342437.8
CDS-3UTR TCA 90 bp CCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGCCGTCCCAGCGCAGAACGAACTGAAGGCTaGTTTGGTGCATCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: PVSMPFRLNLAKMGRPSAERTEG*FGASPG
Trigger: GCCAGGGGATGCACCAAATCAGCCTTCAGTTCGTTC...TGCGCTGGGACGGCCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp CCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGCCGTCCCAGCGCACCATGCCATTCAGACTaGACCTTGCCAAGATGGGCC +
Preference number: 4 (lower is better)
Translates to: PVSMPFRLNLAKMGRPSAPCHSD*TLPRWA
Trigger: GGCCCATCTTGGCAAGGTTCAGTCTGAATGGCATGG...TGCGCTGGGACGGCCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCCTCAGAGGCAGCTGCTaGCCCACGCCACGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSLRGSC*PTPRVL
Trigger: CAGAACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAG...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACGGGCTCAGAGGCAGCTaGTGCCCCACGCCACGAGTT +
Preference number: 4 (lower is better)
Translates to: WRWGILQTALVSPNPRKNGLRGS*CPTPRV
Trigger: AACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCC...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp ACAACACAGGGAAACTTAAGGCAAAGTTCTTCTGGGCAGCGGGCAGTCACTTCCATCCAGGCCAGCGAGTaGCGCTCTCCCTGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: TTQGNLRQSSSGQRAVTSIQASE*RSPCSG
Trigger: CCCGCTGCAGGGAGAGCGGCACTCGCTGGCCTGGAT...GGAAGTGACTGCCCGCTGCCCAGAAGAACTTTGCCTTAAGTTTCCCTGTGTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342437.8
CDS-3UTR GCA 90 bp GAGGGCTCAGAGGCAGCTGCTGCCCCACGCCACGAGTTCTGTTATTACACAACAACCTGTTGCAGCGCTTaGCACCGCCACGAAACCCCT +
Preference number: 4 (lower is better)
Translates to: EGSEAAAAPRHEFCYYTTTCCSA*HRHETP
Trigger: AGGGGTTTCGTGGCGGTGGCAAGCGCTGCAACAGGT...TGTTGTGTAATAACAGAACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp TGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTCGTTGTCCCTTCCTCTaGGCTTTGCGGGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: CSGLAKSTEKQLSRLQTSRCPFL*ALRGWG
Trigger: CCCCCACCCCCGCAAAGCCCAGAGGAAGGGACAACG...AGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp GAGGGCTCAGAGGCAGCTGCTGCCCCACGCCACGAGTTCTGTTATTACACAACAGGAAGTAGAGCGGCTTaGCGTTCCCCGACTCCACCT +
Preference number: 4 (lower is better)
Translates to: EGSEAAAAPRHEFCYYTTGSRAA*RSPTPP
Trigger: AGGTGGAGTCGGGGAACGCCAAGCCGCTCTACTTCC...TGTTGTGTAATAACAGAACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp TCCACCAGCATTGCGGGGAACTCTACCTTCAGCGCATGGGACTCTCGGAAGGTGGGAAAAGGGACCTCTTaGGCACCTTTCTCCTGCGTG +
Preference number: 4 (lower is better)
Translates to: STSIAGNSTFSAWDSRKVGKGTS*APFSCV
Trigger: CACGCAGGAGAAAGGTGCTCAAGAGGTCCCTTTTCC...CACCTTCCGAGAGTCCCATGCGCTGAAGGTAGAGTTCCCCGCAATGCTGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342437.8
CDS-3UTR TCA 90 bp GAGGGCTCAGAGGCAGCTGCTGCCCCACGCCACGAGTTCTGTTATTACACAACAATCTGTGCGTTCCTGTaGCCGGTTCCAGGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: EGSEAAAAPRHEFCYYTTICAFL*PVPGVQ
Trigger: CTGCACTCCTGGAACCGGTCACAGGAACGCACAGAT...TGTTGTGTAATAACAGAACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp TGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTCTCAGAGGCAGCTGCTaGCCCACGCCACGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: CSGLAKSTEKQLSRLQTSLRGSC*PTPRVL
Trigger: CAGAACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAG...AGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp CTAAAACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGGGGCTCAGAGGCAGCTaGTGCCCCACGCCACGAGTT +
Preference number: 4 (lower is better)
Translates to: LKPLYLPVSMPFRLNLAKGLRGS*CPTPRV
Trigger: AACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCC...CTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGTTTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp GGGATTGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGACTGGAGTCCCACAAATaGCCCAAGCGGGAGACCAAG +
Preference number: 4 (lower is better)
Translates to: GIGGGESFRLLWSRQIHGLESHK*PKRETK
Trigger: CTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAG...TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCAATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGTCGCCGTCTACCTGTTaGAGCGCTTGCCACCGCCAC +
Preference number: 4 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGSPSTC*SACHRH
Trigger: GTGGCGGTGGCAAGCGCTGCAACAGGTAGACGGCGA...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342437.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp GAGGGCTCAGAGGCAGCTGCTGCCCCACGCCACGAGTTCTGTTATTACACAACACCTGCGTGTCTGGACTaGGAACCACATCCCGCAATG +
Preference number: 4 (lower is better)
Translates to: EGSEAAAAPRHEFCYYTTPACLD*EPHPAM
Trigger: CATTGCGGGATGTGGTTCCCAGTCCAGACACGCAGG...TGTTGTGTAATAACAGAACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGGGCTGCTGCTGCTGTaGCTGCTCCTCGTGAATCCC +
Preference number: 4 (lower is better)
Translates to: CSGLAKSTEKQLSRLQTSGLLLL*LLLVNP
Trigger: GGGATTCACGAGGAGCAGCCACAGCAGCAGCAGCCC...AGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp GGGATTGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGATCCACCTTGGGCAGCTaGTCGCTGATGATCTCCACC +
Preference number: 4 (lower is better)
Translates to: GIGGGESFRLLWSRQIHGSTLGS*SLMIST
Trigger: GGTGGAGATCATCAGCGACCAGCTGCCCAAGGTGGA...TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCAATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp GGGATTGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAGACTGTGGTAGCCTTTaGTCTCCATCGCTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: GIGGGESFRLLWSRQIHGDCGSL*SPSLPR
Trigger: CCGAGGCAGCGATGGAGACCAAAGGCTACCACAGTC...TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCAATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342437.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCGAGGAGTTCCCTGGGTaGTTGGGCTGTGCACTGGAA +
Preference number: 4 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSEEFPG*LGCALE
Trigger: TTCCAGTGCACAGCCCAATCACCCAGGGAACTCCTC...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp GGGATTGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAGGAAAAGGGACCTCTTaGGCACCTTTCTCCTGCGTG +
Preference number: 4 (lower is better)
Translates to: GIGGGESFRLLWSRQIHGGKGTS*APFSCV
Trigger: CACGCAGGAGAAAGGTGCTCAAGAGGTCCCTTTTCC...TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCAATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp GAGGGCTCAGAGGCAGCTGCTGCCCCACGCCACGAGTTCTGTTATTACACAACAGGAAAAGGGACCTCTTaGGCACCTTTCTCCTGCGTG +
Preference number: 4 (lower is better)
Translates to: EGSEAAAAPRHEFCYYTTGKGTS*APFSCV
Trigger: CACGCAGGAGAAAGGTGCTCAAGAGGTCCCTTTTCC...TGTTGTGTAATAACAGAACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGTTGCACCCAGGTGACTaGCTGCACGGGCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGLHPGD*LHGLPL
Trigger: CAGAGGAAGCCCGTGCAGTCAGTCACCTGGGTGCAA...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342437.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATTTGCACCCAGGTGACTaGCTGCACGGGCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNLHPGD*LHGLPL
Trigger: CAGAGGAAGCCCGTGCAGTCAGTCACCTGGGTGCAA...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342437.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGTCCCACAGTACTGGCTaGCGGACTGGAAAGCGTGGA +
Preference number: 4 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLSHSTG*RTGKRG
Trigger: TCCACGCTTTCCAGTCCGGCAGCCAGTACTGTGGGA...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp AAGATGCTCTCTGAGCCATCAAGTTCCCAGTCTCACTCTCGTAGAGCTGGTTCTGGGCTCAGAGGCAGCTaGTGCCCCACGCCACGAGTT +
Preference number: 4 (lower is better)
Translates to: KMLSEPSSSQSHSRRAGSGLRGS*CPTPRV
Trigger: AACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCC...AGAACCAGCTCTACGAGAGTGAGACTGGGAACTTGATGGCTCAGAGAGCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp CCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGCCGTCCCAGCGCAAGAAGCCAGAAAACGTaGTGGAGTCCCACAAATGCC +
Preference number: 4 (lower is better)
Translates to: PVSMPFRLNLAKMGRPSARSQKT*WSPTNA
Trigger: GGCATTTGTGGGACTCCAGCACGTTTTCTGGCTTCT...TGCGCTGGGACGGCCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp CCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGCCGTCCCAGCGCAAGTTCCCTGGGTGATTaGGCTGTGCACTGGAAAACT +
Preference number: 4 (lower is better)
Translates to: PVSMPFRLNLAKMGRPSASSLGD*AVHWKT
Trigger: AGTTTTCCAGTGCACAGCCCAATCACCCAGGGAACT...TGCGCTGGGACGGCCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGCCTGCGTGTCTGGACTaGGAACCACATCCCGCAATG +
Preference number: 4 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLPACLD*EPHPAM
Trigger: CATTGCGGGATGTGGTTCCCAGTCCAGACACGCAGG...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGCGTTGTCCCTTCCTCTaGGCTTTGCGGGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LDMAFHPEEQEHVSKRWGRCPFL*ALRGWG
Trigger: CCCCCACCCCCGCAAAGCCCAGAGGAAGGGACAACG...CCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGGAAGTAGAGCGGCTTaGCGTTCCCCGACTCCACCT +
Preference number: 4 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGGSRAA*RSPTPP
Trigger: AGGTGGAGTCGGGGAACGCCAAGCCGCTCTACTTCC...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp ACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGGCTTCCTCGTGGCCATaGGCTTCTCCAGCTACAGCT +
Preference number: 4 (lower is better)
Translates to: TPLSPGLHAIQTEPCQDGASSWP*ASPATA
Trigger: AGCTGTAGCTGGAGAAGCCCATGGCCACGAGGAAGC...CCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGGACTGTGGTAGCCTTTaGTCTCCATCGCTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLDCGSL*SPSLPR
Trigger: CCGAGGCAGCGATGGAGACCAAAGGCTACCACAGTC...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342437.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp GAGGGCTCAGAGGCAGCTGCTGCCCCACGCCACGAGTTCTGTTATTACACAACAGAGATTGTGGAGAGCTaGGGAACCAGTGCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: EGSEAAAAPRHEFCYYTTEIVES*GTSAVL
Trigger: CAACACAGCACTGGTTCCTCAGCTCTCCACAATCTC...TGTTGTGTAATAACAGAACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATAGGTGTGAGCGCTCGTaGGATTGTGGAGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNRCERS*DCGELR
Trigger: CCTCAGCTCTCCACAATCTCACGAGCGCTCACACCT...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp CCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGCCGTCCCAGCGCACCGGCTCCAAACCTCTaGCATGACTTTAAACTTGAG +
Preference number: 4 (lower is better)
Translates to: PVSMPFRLNLAKMGRPSAPAPNL*HDFKLE
Trigger: CTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGG...TGCGCTGGGACGGCCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp TGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTATCTGTGCGTTCCTGTaGCCGGTTCCAGGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: CSGLAKSTEKQLSRLQTSICAFL*PVPGVQ
Trigger: CTGCACTCCTGGAACCGGTCACAGGAACGCACAGAT...AGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp CCAGAAAACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAATCTGTGCGTTCCTGTaGCCGGTTCCAGGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: PENVLESHKCPKRETKNKICAFL*PVPGVQ
Trigger: CTGCACTCCTGGAACCGGTCACAGGAACGCACAGAT...TTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGTTTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp CCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGCCGTCCCAGCGCAAAAAACTCCTCCCTCTaGGTGCAGCTTTCACAGGTT +
Preference number: 4 (lower is better)
Translates to: PVSMPFRLNLAKMGRPSAKNSSL*VQLSQV
Trigger: AACCTGTGAAAGCTGCACTCAGAGGGAGGAGTTTTT...TGCGCTGGGACGGCCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCTTGCACCCAGGTGACTaGCTGCACGGGCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSLHPGD*LHGLPL
Trigger: CAGAGGAAGCCCGTGCAGTCAGTCACCTGGGTGCAA...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342437.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp CTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATCCCACAGTACTGGCTaGCGGACTGGAAAGCGTGGA +
Preference number: 4 (lower is better)
Translates to: LVSPNPRKNSFPGSKPLTSHSTG*RTGKRG
Trigger: TCCACGCTTTCCAGTCCGGCAGCCAGTACTGTGGGA...TGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp ACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGGAGCTGAGGAACCAGTaGTGTGTTGACCGAGGGTTC +
Preference number: 4 (lower is better)
Translates to: TPLSPGLHAIQTEPCQDGELRNQ*CVDRGF
Trigger: GAACCCTCGGTCAACACAGCACTGGTTCCTCAGCTC...CCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp ACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAACAAAAACTCAGAGGCAGCTGCTaGCCCACGCCACGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: TCWSPTNAPSGRPRTKQKLRGSC*PTPRVL
Trigger: CAGAACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAG...TTTTTGTTTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp ACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGCAGCTTTCCCAAAGCTaGAGCACTCCAAGGACCTCC +
Preference number: 4 (lower is better)
Translates to: TPLSPGLHAIQTEPCQDGQLSQS*STPRTS
Trigger: GGAGGTCCTTGGAGTGCTGCAGCTTTGGGAAAGCTG...CCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp ACAACACAGGGAAACTTAAGGCAAAGTTCTTCTGGGCAGCGGGCAGTCACTTCCACCTGTTGCAGCGCTTaGCACCGCCACGAAACCCCT +
Preference number: 4 (lower is better)
Translates to: TTQGNLRQSSSGQRAVTSTCCSA*HRHETP
Trigger: AGGGGTTTCGTGGCGGTGGCAAGCGCTGCAACAGGT...GGAAGTGACTGCCCGCTGCCCAGAAGAACTTTGCCTTAAGTTTCCCTGTGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342437.8
CDS-3UTR GCA 90 bp AACCTCTGCCAGCTCTGCCCAGAATTGTTGGGACACTTAGTTACCATCTTCCTCTCGCCGTCTACCTGTTaGAGCGCTTGCCACCGCCAC +
Preference number: 4 (lower is better)
Translates to: NLCQLCPELLGHLVTIFLSPSTC*SACHRH
Trigger: GTGGCGGTGGCAAGCGCTGCAACAGGTAGACGGCGA...GAGGAAGATGGTAACTAAGTGTCCCAACAATTCTGGGCAGAGCTGGCAGAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342437.8
CDS-3UTR GCA 90 bp ACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAACAAAAATCGCCGTCTACCTGTTaGAGCGCTTGCCACCGCCAC +
Preference number: 4 (lower is better)
Translates to: TCWSPTNAPSGRPRTKQKSPSTC*SACHRH
Trigger: GTGGCGGTGGCAAGCGCTGCAACAGGTAGACGGCGA...TTTTTGTTTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCGTCAGAGGAGTTCCCTaGGTGATTGGGCTGTGCACT +
Preference number: 4 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSVRGVP*VIGLCT
Trigger: AGTGCACAGCCCAATCACCCAGGGAACTCCTCTGAC...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp GGGATTGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGACAGGGCTGTGCGACCTaGAGCCTCGATTTTCAACAT +
Preference number: 4 (lower is better)
Translates to: GIGGGESFRLLWSRQIHGQGCAT*SLDFQH
Trigger: ATGTTGAAAATCGAGGCTCCAGGTCGCACAGCCCTG...TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCAATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp GGGATTGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAGGGATGCTGGCCTCTaGGTAATAGCTCCCATCATC +
Preference number: 4 (lower is better)
Translates to: GIGGGESFRLLWSRQIHGRDAGL*VIAPII
Trigger: GATGATGGGAGCTATTACCCAGAGGCCAGCATCCCT...TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCAATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCCAGAGGAAGGGATGCTaGCCTCTGGGTAATAGCTCC +
Preference number: 4 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSQRKGC*PLGNSS
Trigger: GGAGCTATTACCCAGAGGCCAGCATCCCTTCCTCTG...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp AAGATGCTCTCTGAGCCATCAAGTTCCCAGTCTCACTCTCGTAGAGCTGGTTCTGGGCTGCTGCTGCTGTaGCTGCTCCTCGTGAATCCC +
Preference number: 4 (lower is better)
Translates to: KMLSEPSSSQSHSRRAGSGLLLL*LLLVNP
Trigger: GGGATTCACGAGGAGCAGCCACAGCAGCAGCAGCCC...AGAACCAGCTCTACGAGAGTGAGACTGGGAACTTGATGGCTCAGAGAGCATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGGCGCTCGTGAGATTGTaGAGAGCTGAGGAACCAGTG +
Preference number: 4 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLALVRL*RAEEPV
Trigger: CACTGGTTCCTCAGCTCTCCACAATCTCACGAGCGC...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp TGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTTCCACCTTGGGCAGCTaGTCGCTGATGATCTCCACC +
Preference number: 4 (lower is better)
Translates to: CSGLAKSTEKQLSRLQTSSTLGS*SLMIST
Trigger: GGTGGAGATCATCAGCGACCAGCTGCCCAAGGTGGA...AGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCGGAAGTAGAGCGGCTTaGCGTTCCCCGACTCCACCT +
Preference number: 4 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSGSRAA*RSPTPP
Trigger: AGGTGGAGTCGGGGAACGCCAAGCCGCTCTACTTCC...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGCTTCCTCGTGGCCATaGGCTTCTCCAGCTACAGCT +
Preference number: 4 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGASSWP*ASPATA
Trigger: AGCTGTAGCTGGAGAAGCCCATGGCCACGAGGAAGC...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATGACTGTGGTAGCCTTTaGTCTCCATCGCTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNDCGSL*SPSLPR
Trigger: CCGAGGCAGCGATGGAGACCAAAGGCTACCACAGTC...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342437.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR CAA 72 bp CCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATaGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: PRNRNMFLSAGG*EVGNPSDCSGL
Trigger: GAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCGAGGAGTTCCCTGGGTaGTTGGGCTGTGCACTGGAA +
Preference number: 4 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSEEFPG*LGCALE
Trigger: TTCCAGTGCACAGCCCAATCACCCAGGGAACTCCTC...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp GGGATTGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGACAGAAGCAGTGTAGCTaGAGGCATTGTTTACAGGGC +
Preference number: 4 (lower is better)
Translates to: GIGGGESFRLLWSRQIHGQKQCS*RHCLQG
Trigger: GCCCTGTAAACAATGCCTTCAGCTACACTGCTTCTG...TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCAATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp GAGGGCTCAGAGGCAGCTGCTGCCCCACGCCACGAGTTCTGTTATTACACAACAGCCAGTCACACCATTTaGGATGGCACTCTCTACTTC +
Preference number: 4 (lower is better)
Translates to: EGSEAAAAPRHEFCYYTTASHTI*DGTLYF
Trigger: GAAGTAGAGAGTGCCATCTCAAATGGTGTGACTGGC...TGTTGTGTAATAACAGAACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp GGGATTGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAGCCAGTCACACCATTTaGGATGGCACTCTCTACTTC +
Preference number: 4 (lower is better)
Translates to: GIGGGESFRLLWSRQIHGASHTI*DGTLYF
Trigger: GAAGTAGAGAGTGCCATCTCAAATGGTGTGACTGGC...TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCAATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp CCAGAAAACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAATGCAGCTGCCACAGGTaGCTACCCCATAATGGCATC +
Preference number: 4 (lower is better)
Translates to: PENVLESHKCPKRETKNKCSCHR*LPHNGI
Trigger: GATGCCATTATGGGGTAGTCACCTGTGGCAGCTGCA...TTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGTTTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCGAGATTGTGGAGAGCTaGGGAACCAGTGCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSEIVES*GTSAVL
Trigger: CAACACAGCACTGGTTCCTCAGCTCTCCACAATCTC...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp CCAGAAAACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAGAACGAACTGAAGGCTaGTTTGGTGCATCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: PENVLESHKCPKRETKNKERTEG*FGASPG
Trigger: GCCAGGGGATGCACCAAATCAGCCTTCAGTTCGTTC...TTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGTTTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCGAGTGTGTATACCAGTaGTGCAGAAGACCGTGGACG +
Preference number: 4 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSECVYQ*CRRPWT
Trigger: CGTCCACGGTCTTCTGCATCACTGGTATACACACTC...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGGAGTGTGTATACCAGTaGTGCAGAAGACCGTGGACG +
Preference number: 4 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLECVYQ*CRRPWT
Trigger: CGTCCACGGTCTTCTGCATCACTGGTATACACACTC...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACCCCGATGGAGCAGGATaGAGCAGAAGCCAGAAAACG +
Preference number: 4 (lower is better)
Translates to: WRWGILQTALVSPNPRKNPDGAG*SRSQKT
Trigger: CGTTTTCTGGCTTCTGCTTCATCCTGCTCCATCGGG...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATCCCGATGGAGCAGGATaGAGCAGAAGCCAGAAAACG +
Preference number: 4 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNPDGAG*SRSQKT
Trigger: CGTTTTCTGGCTTCTGCTTCATCCTGCTCCATCGGG...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCAGCGCATCCTGCCATaGTCTGTGCGTTCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSQRILP*SVRSCD
Trigger: GTCACAGGAACGCACAGATCATGGCAGGATGCGCTG...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATCCATGCCATTCAGACTaGACCTTGCCAAGATGGGCC +
Preference number: 4 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNPCHSD*TLPRWA
Trigger: GGCCCATCTTGGCAAGGTTCAGTCTGAATGGCATGG...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATCACATTGCTAGCATGTaGAGGGCTGTGCGACCTGGA +
Preference number: 4 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNHIASM*RAVRPG
Trigger: TCCAGGTCGCACAGCCCTGCACATGCTAGCAATGTG...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCTCCCACAGTACTGGCTaGCGGACTGGAAAGCGTGGA +
Preference number: 4 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSSHSTG*RTGKRG
Trigger: TCCACGCTTTCCAGTCCGGCAGCCAGTACTGTGGGA...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGAACCTCTGCCAGCTCTaGCCAGAATTGTTGGGACAC +
Preference number: 4 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLNLCQL*PELLGH
Trigger: GTGTCCCAACAATTCTGGGCAGAGCTGGCAGAGGTT...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATTCGCTCACCAGGTCATaGATGGAGTCCAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNSLTRS*MESSSL
Trigger: CAAGCTGCTGGACTCCATGCATGACCTGGTGAGCGA...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACTCGCTCACCAGGTCATaGATGGAGTCCAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: WRWGILQTALVSPNPRKNSLTRS*MESSSL
Trigger: CAAGCTGCTGGACTCCATGCATGACCTGGTGAGCGA...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp CCAGAAAACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAATCGCTCACCAGGTCATaGATGGAGTCCAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: PENVLESHKCPKRETKNKSLTRS*MESSSL
Trigger: CAAGCTGCTGGACTCCATGCATGACCTGGTGAGCGA...TTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGTTTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCGGGAATCCTTCAGACTaGTCTGGTCTCGCCAAATCC +
Preference number: 4 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSGNPSD*SGLAKS
Trigger: GGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGTCCTGCCATGATCTGTaGGTTCCTGTGACCGGTTCC +
Preference number: 4 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGSCHDL*VPVTGS
Trigger: GGAACCGGTCACAGGAACGCACAGATCATGGCAGGA...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGTCCCAGCGCATCCTaGCATGATCTGTGCGTTCCT +
Preference number: 4 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSRPSAS*HDLCVP
Trigger: AGGAACGCACAGATCATGGCAGGATGCGCTGGGACG...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp CTAAAACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGAGGCAGCAACGCTCTTaGACCCAGGTGACTGACTGC +
Preference number: 4 (lower is better)
Translates to: LKPLYLPVSMPFRLNLAKRQQRS*TQVTDC
Trigger: GCAGTCAGTCACCTGGGTGCAAGAGCGTTGCTGCCT...CTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGTTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp ACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGAATCCAGGCCAGCGAGTaGCGCTCTCCCTGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: TEKQLSRLQTSDMTLNLRIQASE*RSPCSG
Trigger: CCCGCTGCAGGGAGAGCGGCACTCGCTGGCCTGGAT...TCTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342437.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGGAAAACTGCCAAAGCTaGCTGTGGTGGAGGACACAG +
Preference number: 4 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLENCQS*LWWRTQ
Trigger: CTGTGTCCTCCACCACAGCCAGCTTTGGCAGTTTTC...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCGATTGGGCTGTGCACTaGAAAACTGCCAAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSDWAVH*KTAKAG
Trigger: GCCAGCTTTGGCAGTTTTCCAGTGCACAGCCCAATC...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTCATCCCGCAATGTACTaGATCCAGCAGAGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: CSGLAKSTEKQLSRLQTSHPAMY*IQQRCQ
Trigger: CTGGCACCTCTGCTGGATCCAGTACATTGCGGGATG...AGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATCATCCCGCAATGTACTaGATCCAGCAGAGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNHPAMY*IQQRCQ
Trigger: CTGGCACCTCTGCTGGATCCAGTACATTGCGGGATG...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACACATCCCGCAATGTACTaGATCCAGCAGAGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: LVSPNPRKNSFPGSKPLTHPAMY*IQQRCQ
Trigger: CTGGCACCTCTGCTGGATCCAGTACATTGCGGGATG...TGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGCCGTCCCAGCGCATTGTTTAATACCCACTaGGAATCCGCTGCCTTCACA +
Preference number: 4 (lower is better)
Translates to: PVSMPFRLNLAKMGRPSALFNTH*ESAAFT
Trigger: TGTGAAGGCAGCGGATTCCCAGTGGGTATTAAACAA...TGCGCTGGGACGGCCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp TGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGCGCTCGTGAGATTGTaGAGAGCTGAGGAACCAGTG +
Preference number: 4 (lower is better)
Translates to: CSGLAKSTEKQLSRLQTSALVRL*RAEEPV
Trigger: CACTGGTTCCTCAGCTCTCCACAATCTCACGAGCGC...AGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp CCAGAAAACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAGCGCTCGTGAGATTGTaGAGAGCTGAGGAACCAGTG +
Preference number: 4 (lower is better)
Translates to: PENVLESHKCPKRETKNKALVRL*RAEEPV
Trigger: CACTGGTTCCTCAGCTCTCCACAATCTCACGAGCGC...TTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGTTTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp GAGGGCTCAGAGGCAGCTGCTGCCCCACGCCACGAGTTCTGTTATTACACAACAGCCCACTTCACGACTTaGATCATCTGTTTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: EGSEAAAAPRHEFCYYTTAHFTT*IICLPA
Trigger: AGCAGGCAAACAGATGATCCAAGTCGTGAAGTGGGC...TGTTGTGTAATAACAGAACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp GAGGGCTCAGAGGCAGCTGCTGCCCCACGCCACGAGTTCTGTTATTACACAACATGGAGTCCAGCAGCTTaGTCAGTTGGTAGAACCTCT +
Preference number: 4 (lower is better)
Translates to: EGSEAAAAPRHEFCYYTTWSPAA*SVGRTS
Trigger: AGAGGTTCTACCAACTGACCAAGCTGCTGGACTCCA...TGTTGTGTAATAACAGAACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCTCACCAGGTCATGCATaGAGTCCAGCAGCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSSPGHA*SPAAWS
Trigger: TGACCAAGCTGCTGGACTCCATGCATGACCTGGTGA...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGAAGGCAAAGTTCTTCTaGGCAGCGGGCAGTCACTTC +
Preference number: 4 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLKAKFF*AAGSHF
Trigger: GAAGTGACTGCCCGCTGCCCAGAAGAACTTTGCCTT...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACCTGGGGGATTGGAGGTaGGGAATCCTTCAGACTGCT +
Preference number: 4 (lower is better)
Translates to: WRWGILQTALVSPNPRKNLGDWR*GILQTA
Trigger: AGCAGTCTGAAGGATTCCCCACCTCCAATCCCCCAG...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CCAGAAAACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAACTGGGGGATTGGAGGTaGGGAATCCTTCAGACTGCT +
Preference number: 4 (lower is better)
Translates to: PENVLESHKCPKRETKNKLGDWR*GILQTA
Trigger: AGCAGTCTGAAGGATTCCCCACCTCCAATCCCCCAG...TTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGTTTTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
3UTR CAA 72 bp CACCAGGTCATGCATGGAGTCCAGCAGCTTGGTCAGTaGGTAGAACCTCTGCCAGCTCTGCCCAGAATTGTT +
Preference number: 4 (lower is better)
Translates to: HQVMHGVQQLGQ*VEPLPALPRIV
Trigger: AACAATTCTGGGCAGAGCTGGCAGAGGTTCTACCAACTGACCAAGCTGCTGGACTCCATGCATGACCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342437.8
CDS-3UTR TCA 90 bp CCAGAAAACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAATGGAGGACACAGAGTTaGTTCCAGCAGGGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: PENVLESHKCPKRETKNKWRTQS*FQQGCK
Trigger: TTTGCAGCCCTGCTGGAATCAACTCTGTGTCCTCCA...TTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGTTTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGCAGAAGCAGTGTAGCTaGAGGCATTGTTTACAGGGC +
Preference number: 4 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLQKQCS*RHCLQG
Trigger: GCCCTGTAAACAATGCCTTCAGCTACACTGCTTCTG...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGGCCAGTCACACCATTTaGGATGGCACTCTCTACTTC +
Preference number: 4 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLASHTI*DGTLYF
Trigger: GAAGTAGAGAGTGCCATCTCAAATGGTGTGACTGGC...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCGAAGGACTGTCCACCTaGATTCACCCCAACAATAGC +
Preference number: 4 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSEGLST*IHPNNS
Trigger: GCTATTGTTGGGGTGAATTCAGGTGGACAGTCCTTC...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp ACAACACAGGGAAACTTAAGGCAAAGTTCTTCTGGGCAGCGGGCAGTCACTTCCTGCAGCTGCCACAGGTaGCTACCCCATAATGGCATC +
Preference number: 4 (lower is better)
Translates to: TTQGNLRQSSSGQRAVTSCSCHR*LPHNGI
Trigger: GATGCCATTATGGGGTAGTCACCTGTGGCAGCTGCA...GGAAGTGACTGCCCGCTGCCCAGAAGAACTTTGCCTTAAGTTTCCCTGTGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342437.8
CDS-3UTR TCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCATGCAGCCTGGCTTTTaGGGCCATCCTTTGGAATTG +
Preference number: 4 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSMQPGF*GHPLEL
Trigger: CAATTCCAAAGGATGGCCTCAAAAGCCAGGCTGCAT...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAGTGTGTATACCAGTaGTGCAGAAGACCGTGGACG +
Preference number: 4 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGECVYQ*CRRPWT
Trigger: CGTCCACGGTCTTCTGCATCACTGGTATACACACTC...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACGAGTGTGTATACCAGTaGTGCAGAAGACCGTGGACG +
Preference number: 4 (lower is better)
Translates to: WRWGILQTALVSPNPRKNECVYQ*CRRPWT
Trigger: CGTCCACGGTCTTCTGCATCACTGGTATACACACTC...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp CCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGCCGTCCCAGCGCACTGTGCACCGTAAGTTaGCTGTATTTAAAGATCTGC +
Preference number: 4 (lower is better)
Translates to: PVSMPFRLNLAKMGRPSALCTVS*LYLKIC
Trigger: GCAGATCTTTAAATACAGTCAACTTACGGTGCACAG...TGCGCTGGGACGGCCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp TTTCCCTTTCTTAAATACACTGTAAACGGTTCATTATGCATGCAGGACATTGCAGTCTCCCGGGCCCAATaGCACCCCGGGCGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: FPFLKYTVNGSLCMQDIAVSRAQ*HPGRGG
Trigger: CCCTCCGCGCCCGGGGTGTCATTGGGCCCGGGAGAC...TGCAATGTCCTGCATGCATAATGAACCGTTTACAGTGTATTTAAGAAAGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp CTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGTGCACTGGAAAACTaGCAAAGCTGGCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LVSPNPRKNSFPGSKPLTCALEN*QSWLWW
Trigger: CCACCACAGCCAGCTTTGGCAGTTTTCCAGTGCACA...TGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp TGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTTGTGCACTGGAAAACTaGCAAAGCTGGCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: CSGLAKSTEKQLSRLQTSCALEN*QSWLWW
Trigger: CCACCACAGCCAGCTTTGGCAGTTTTCCAGTGCACA...AGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGTGTGCACTGGAAAACTaGCAAAGCTGGCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGCALEN*QSWLWW
Trigger: CCACCACAGCCAGCTTTGGCAGTTTTCCAGTGCACA...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCGACCGAGGGTTCTTTTaGAGGAGCGATGTACGTTGT +
Preference number: 4 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSDRGFF*RSDVRC
Trigger: ACAACGTACATCGCTCCTGCAAAAGAACCCTCGGTC...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGGACCGAGGGTTCTTTTaGAGGAGCGATGTACGTTGT +
Preference number: 4 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLDRGFF*RSDVRC
Trigger: ACAACGTACATCGCTCCTGCAAAAGAACCCTCGGTC...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp CTAAAACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGGAGCTGAGGAACCAGTaGTGTGTTGACCGAGGGTTC +
Preference number: 4 (lower is better)
Translates to: LKPLYLPVSMPFRLNLAKELRNQ*CVDRGF
Trigger: GAACCCTCGGTCAACACAGCACTGGTTCCTCAGCTC...CTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGTTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp GGGATTGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGACCTCATTTCTTCAAATaGAGCCTGGCTTTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: GIGGGESFRLLWSRQIHGPHFFK*SLAFEA
Trigger: GGCCTCAAAAGCCAGGCTGCATTTGAAGAAATGAGG...TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCAATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAACCTCTGCCAGCTCTaGCCAGAATTGTTGGGACAC +
Preference number: 4 (lower is better)
Translates to: WRWGILQTALVSPNPRKNNLCQL*PELLGH
Trigger: GTGTCCCAACAATTCTGGGCAGAGCTGGCAGAGGTT...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp ACAACACAGGGAAACTTAAGGCAAAGTTCTTCTGGGCAGCGGGCAGTCACTTCCTCGCTCACCAGGTCATaGATGGAGTCCAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: TTQGNLRQSSSGQRAVTSSLTRS*MESSSL
Trigger: CAAGCTGCTGGACTCCATGCATGACCTGGTGAGCGA...GGAAGTGACTGCCCGCTGCCCAGAAGAACTTTGCCTTAAGTTTCCCTGTGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342437.8
CDS-3UTR GCA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATGATCTCCACCAGCATTaGGGGGAACTCTACCTTCAG +
Preference number: 4 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNDLHQH*GELYLQ
Trigger: CTGAAGGTAGAGTTCCCCGCAATGCTGGTGGAGATC...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp CTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACAGGGAATCCTTCAGACTaGTCTGGTCTCGCCAAATCC +
Preference number: 4 (lower is better)
Translates to: LVSPNPRKNSFPGSKPLTGNPSD*SGLAKS
Trigger: GGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC...TGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATGGGAATCCTTCAGACTaGTCTGGTCTCGCCAAATCC +
Preference number: 4 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNGNPSD*SGLAKS
Trigger: GGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp CCAGAAAACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAGGGAATCCTTCAGACTaGTCTGGTCTCGCCAAATCC +
Preference number: 4 (lower is better)
Translates to: PENVLESHKCPKRETKNKGNPSD*SGLAKS
Trigger: GGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC...TTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGTTTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp CTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACAATTCAGACTGAACCTTaGCAAGATGGGCCGTCCCAG +
Preference number: 4 (lower is better)
Translates to: LVSPNPRKNSFPGSKPLTIQTEP*QDGPSQ
Trigger: CTGGGACGGCCCATCTTGGCAAGGTTCAGTCTGAAT...TGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp CCAGAAAACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAACTCCTCCCTCTGAGTaGAGCTTTCACAGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: PENVLESHKCPKRETKNKTPPSE*SFHRFP
Trigger: GGGAAACCTGTGAAAGCTGCACTCAGAGGGAGGAGT...TTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGTTTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTGAGTGCCGCTCTCCCTaGAGCGGGAGAGCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVECRSP*SGRARG
Trigger: GCCTCGGGCTCTCCCGCTGCAGGGAGAGCGGCACTC...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342437.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACGATTGGGCTGTGCACTaGAAAACTGCCAAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: WRWGILQTALVSPNPRKNDWAVH*KTAKAG
Trigger: GCCAGCTTTGGCAGTTTTCCAGTGCACAGCCCAATC...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTCAGGGCTGTGCGACCTaGAGCCTCGATTTTCAACAT +
Preference number: 4 (lower is better)
Translates to: CSGLAKSTEKQLSRLQTSQGCAT*SLDFQH
Trigger: ATGTTGAAAATCGAGGCTCCAGGTCGCACAGCCCTG...AGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp ACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAACAAAAACCTGCGTGTCTGGACTaGGAACCACATCCCGCAATG +
Preference number: 4 (lower is better)
Translates to: TCWSPTNAPSGRPRTKQKPACLD*EPHPAM
Trigger: CATTGCGGGATGTGGTTCCCAGTCCAGACACGCAGG...TTTTTGTTTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CCAGAAAACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAAGGGATGCTGGCCTCTaGGTAATAGCTCCCATCATC +
Preference number: 4 (lower is better)
Translates to: PENVLESHKCPKRETKNKRDAGL*VIAPII
Trigger: GATGATGGGAGCTATTACCCAGAGGCCAGCATCCCT...TTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGTTTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCAGAGGAAGGGATGCTaGCCTCTGGGTAATAGCTCC +
Preference number: 4 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSQRKGC*PLGNSS
Trigger: GGAGCTATTACCCAGAGGCCAGCATCCCTTCCTCTG...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCGCCCACTTCACGACTTaGATCATCTGTTTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSAHFTT*IICLPA
Trigger: AGCAGGCAAACAGATGATCCAAGTCGTGAAGTGGGC...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGTCACCAGGTCATGCATaGAGTCCAGCAGCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGSPGHA*SPAAWS
Trigger: TGACCAAGCTGCTGGACTCCATGCATGACCTGGTGA...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACAAAGGCAAAGTTCTTCTaGGCAGCGGGCAGTCACTTC +
Preference number: 4 (lower is better)
Translates to: LVSPNPRKNSFPGSKPLTKAKFF*AAGSHF
Trigger: GAAGTGACTGCCCGCTGCCCAGAAGAACTTTGCCTT...TGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGTTTCTTGGGTCCTTCTaGGTGTGGAACAACACAGGG +
Preference number: 4 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLFLGSF*VWNNTG
Trigger: CCCTGTGTTGTTCCACACCCAGAAGGACCCAAGAAA...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACTCCTTCAGACTGCTCTaGTCTCGCCAAATCCACGGA +
Preference number: 4 (lower is better)
Translates to: WRWGILQTALVSPNPRKNSFRLL*SRQIHG
Trigger: TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGA...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCATTGCTGCTTCCTCGTaGCCATGGGCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSIAASS*PWASPA
Trigger: AGCTGGAGAAGCCCATGGCCACGAGGAAGCAGCAAT...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp GGGATTGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGACTCAGCTACAGTTGCTaGAAGTTCCTTAGATTCCAG +
Preference number: 4 (lower is better)
Translates to: GIGGGESFRLLWSRQIHGLSYSC*KFLRFQ
Trigger: CTGGAATCTAAGGAACTTTCAGCAACTGTAGCTGAG...TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCAATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp ACAACACAGGGAAACTTAAGGCAAAGTTCTTCTGGGCAGCGGGCAGTCACTTCCTGGAGGACACAGAGTTaGTTCCAGCAGGGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: TTQGNLRQSSSGQRAVTSWRTQS*FQQGCK
Trigger: TTTGCAGCCCTGCTGGAATCAACTCTGTGTCCTCCA...GGAAGTGACTGCCCGCTGCCCAGAAGAACTTTGCCTTAAGTTTCCCTGTGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342437.8
CDS-3UTR TCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCCAGAGGATCTCAGAGTaGCATTATTGGGACTGGAGA +
Preference number: 4 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSQRISE*HYWDWR
Trigger: TCTCCAGTCCCAATAATGTCACTCTGAGATCCTCTG...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp CTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACACAGAAGCAGTGTAGCTaGAGGCATTGTTTACAGGGC +
Preference number: 4 (lower is better)
Translates to: LVSPNPRKNSFPGSKPLTQKQCS*RHCLQG
Trigger: GCCCTGTAAACAATGCCTTCAGCTACACTGCTTCTG...TGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACCAGAAGCAGTGTAGCTaGAGGCATTGTTTACAGGGC +
Preference number: 4 (lower is better)
Translates to: WRWGILQTALVSPNPRKNQKQCS*RHCLQG
Trigger: GCCCTGTAAACAATGCCTTCAGCTACACTGCTTCTG...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCTGCCTGCTAAGCGGTTaGGCGTGGAGAGCAGATTTT +
Preference number: 4 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSCLLSG*AWRADF
Trigger: AAAATCTGCTCTCCACGCTCAACCGCTTAGCAGGCA...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp CTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGGAACGAACTGAAGGCTaGTTTGGTGCATCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LDMAFHPEEQEHVSKRWGERTEG*FGASPG
Trigger: GCCAGGGGATGCACCAAATCAGCCTTCAGTTCGTTC...CCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGTGCAGTCGAACGAACTaGAGGCTGATTTGGTGCATC +
Preference number: 4 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGCSRTN*RLIWCI
Trigger: GATGCACCAAATCAGCCTTCAGTTCGTTCGACTGCA...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp GGGATTGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGATGTATTCTTCAAAGGTaGGCTGCAGTCGAACGAACT +
Preference number: 4 (lower is better)
Translates to: GIGGGESFRLLWSRQIHGCILQR*AAVERT
Trigger: AGTTCGTTCGACTGCAGCTCACCTTTGAAGAATACA...TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCAATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGCCGGCTCCAAACCTCTaGCATGACTTTAAACTTGAG +
Preference number: 4 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLPAPNL*HDFKLE
Trigger: CTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGG...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp CTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGCCCGATGGAGCAGGATaGAGCAGAAGCCAGAAAACG +
Preference number: 4 (lower is better)
Translates to: LDMAFHPEEQEHVSKRWGPDGAG*SRSQKT
Trigger: CGTTTTCTGGCTTCTGCTTCATCCTGCTCCATCGGG...CCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATGGAAAAGATGCTCTCTaGGCCATCAAGTTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNGKDAL*AIKFPV
Trigger: GACTGGGAACTTGATGGCTCAGAGAGCATCTTTTCC...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp CCAGAAAACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAGGAAAAGATGCTCTCTaGGCCATCAAGTTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: PENVLESHKCPKRETKNKGKDAL*AIKFPV
Trigger: GACTGGGAACTTGATGGCTCAGAGAGCATCTTTTCC...TTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGTTTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp CTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGCCATGCCATTCAGACTaGACCTTGCCAAGATGGGCC +
Preference number: 4 (lower is better)
Translates to: LDMAFHPEEQEHVSKRWGPCHSD*TLPRWA
Trigger: GGCCCATCTTGGCAAGGTTCAGTCTGAATGGCATGG...CCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAAAACTCCTCCCTCTaGGTGCAGCTTTCACAGGTT +
Preference number: 4 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSKNSSL*VQLSQV
Trigger: AACCTGTGAAAGCTGCACTCAGAGGGAGGAGTTTTT...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGTCATGTTCAGAGGGCTaGAAACAGACGGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLSCSEG*KQTGFS
Trigger: AGAAAAGCCCGTCTGTTTGCAGCCCTCTGAACATGA...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGTGGGTGATTGGGCTGTaGACTGGAAAACTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGWVIGL*TGKLPK
Trigger: CTTTGGCAGTTTTCCAGTGCACAGCCCAATCACCCA...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACCTGGAGATTTTACACTaGAGTGACTTGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: WRWGILQTALVSPNPRKNLEILH*SDLEGW
Trigger: CCAGCCCTCCAAGTCACTGCAGTGTAAAATCTCCAG...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp CTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACACCACTGGGAATCCGCTaGCTTCACAGTTACCATCAA +
Preference number: 4 (lower is better)
Translates to: LVSPNPRKNSFPGSKPLTPLGIR*LHSYHQ
Trigger: TTGATGGTAACTGTGAAGGCAGCGGATTCCCAGTGG...TGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGTCCTGGAAGTACCTTTaGCCACTTCACGACTTGGAT +
Preference number: 4 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLSWKYL*PLHDLD
Trigger: ATCCAAGTCGTGAAGTGGGCAAAGGTACTTCCAGGA...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCCCTCATTTCTTCAAATaGAGCCTGGCTTTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSPHFFK*SLAFEA
Trigger: GGCCTCAAAAGCCAGGCTGCATTTGAAGAAATGAGG...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp CTAAAACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGAACCTCTGCCAGCTCTaGCCAGAATTGTTGGGACAC +
Preference number: 4 (lower is better)
Translates to: LKPLYLPVSMPFRLNLAKNLCQL*PELLGH
Trigger: GTGTCCCAACAATTCTGGGCAGAGCTGGCAGAGGTT...CTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGTTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCAACCTCTGCCAGCTCTaGCCAGAATTGTTGGGACAC +
Preference number: 4 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSNLCQL*PELLGH
Trigger: GTGTCCCAACAATTCTGGGCAGAGCTGGCAGAGGTT...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp CTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGTCGCTCACCAGGTCATaGATGGAGTCCAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LDMAFHPEEQEHVSKRWGSLTRS*MESSSL
Trigger: CAAGCTGCTGGACTCCATGCATGACCTGGTGAGCGA...CCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGAAGCCAGAAAACGTaGTGGAGTCCCACAAATGCC +
Preference number: 4 (lower is better)
Translates to: WRWGILQTALVSPNPRKNRSQKT*WSPTNA
Trigger: GGCATTTGTGGGACTCCAGCACGTTTTCTGGCTTCT...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp CTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACAAGAAGCCAGAAAACGTaGTGGAGTCCCACAAATGCC +
Preference number: 4 (lower is better)
Translates to: LVSPNPRKNSFPGSKPLTRSQKT*WSPTNA
Trigger: GGCATTTGTGGGACTCCAGCACGTTTTCTGGCTTCT...TGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGAGAAGCCAGAAAACGTaGTGGAGTCCCACAAATGCC +
Preference number: 4 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGRSQKT*WSPTNA
Trigger: GGCATTTGTGGGACTCCAGCACGTTTTCTGGCTTCT...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp CTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGCAGCTTTCCCAAAGCTaGAGCACTCCAAGGACCTCC +
Preference number: 4 (lower is better)
Translates to: LDMAFHPEEQEHVSKRWGQLSQS*STPRTS
Trigger: GGAGGTCCTTGGAGTGCTGCAGCTTTGGGAAAGCTG...CCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp ACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGCAAGGTAATGTTGCCTaGATGGTGAACCCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: TPLSPGLHAIQTEPCQDGQGNVA*MVNPGE
Trigger: TTCTCCAGGGTTCACCATGCAGGCAACATTACCTTG...CCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCACTCCTCCCTCTGAGTaGAGCTTTCACAGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSTPPSE*SFHRFP
Trigger: GGGAAACCTGTGAAAGCTGCACTCAGAGGGAGGAGT...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp TTTGGACTGGGACAGGCATTCAACAGTGAATTTAGAATATGGCTTTGCTGTTTAGAGTGCCGCTCTCCCTaGAGCGGGAGAGCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: FGLGQAFNSEFRIWLCCLECRSP*SGRARG
Trigger: GCCTCGGGCTCTCCCGCTGCAGGGAGAGCGGCACTC...TAAACAGCAAAGCCATATTCTAAATTCACTGTTGAATGCCTGTCCCAGTCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp AAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTGAGTGCCGCTCTCCCTaGAGCGGGAGAGCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: KGFKTTEEVSVWLFTTETECRSP*SGRARG
Trigger: GCCTCGGGCTCTCCCGCTGCAGGGAGAGCGGCACTC...AGTCTCTGTTGTAAATAACCACACTGAAACCTCTTCGGTTGTCTTGAAACCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp TCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGACCTGTTGCAGCGCTTaGCACCGCCACGAAACCCCT +
Preference number: 4 (lower is better)
Translates to: STEKQLSRLQTSDMTLNLTCCSA*HRHETP
Trigger: AGGGGTTTCGTGGCGGTGGCAAGCGCTGCAACAGGT...CAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342437.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp TGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTCAGCAAGTCCAATATTaGCTGATCGGCGGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: CSGLAKSTEKQLSRLQTSQQVQY*LIGGED
Trigger: ATCCTCACCGCCGATCAGCCAATATTGGACTTGCTG...AGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344721.8
CDS-3UTR CCA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCGATTGGGCTGTGCACTaGAAAACTGCCAAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSDWAVH*KTAKAG
Trigger: GCCAGCTTTGGCAGTTTTCCAGTGCACAGCCCAATC...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGTTCCCTGGGTGATTaGGCTGTGCACTGGAAAACT +
Preference number: 4 (lower is better)
Translates to: WRWGILQTALVSPNPRKNSSLGD*AVHWKT
Trigger: AGTTTTCCAGTGCACAGCCCAATCACCCAGGGAACT...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CCAGAAAACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAAGTTCCCTGGGTGATTaGGCTGTGCACTGGAAAACT +
Preference number: 4 (lower is better)
Translates to: PENVLESHKCPKRETKNKSSLGD*AVHWKT
Trigger: AGTTTTCCAGTGCACAGCCCAATCACCCAGGGAACT...TTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGTTTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp ACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAACAAAAAGTCAGAGGAGTTCCCTaGGTGATTGGGCTGTGCACT +
Preference number: 4 (lower is better)
Translates to: TCWSPTNAPSGRPRTKQKVRGVP*VIGLCT
Trigger: AGTGCACAGCCCAATCACCCAGGGAACTCCTCTGAC...TTTTTGTTTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp GGGATTGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAGTGACTTGGAGGGCTaGAAATTGAGGATTTCATGC +
Preference number: 4 (lower is better)
Translates to: GIGGGESFRLLWSRQIHGSDLEG*KLRISC
Trigger: GCATGAAATCCTCAATTTCCAGCCCTCCAAGTCACT...TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCAATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp GAGGGCTCAGAGGCAGCTGCTGCCCCACGCCACGAGTTCTGTTATTACACAACAAGTGACTTGGAGGGCTaGAAATTGAGGATTTCATGC +
Preference number: 4 (lower is better)
Translates to: EGSEAAAAPRHEFCYYTTSDLEG*KLRISC
Trigger: GCATGAAATCCTCAATTTCCAGCCCTCCAAGTCACT...TGTTGTGTAATAACAGAACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp GGGATTGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAATTGGGACTGGAGACTaGAGATTTTACACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: GIGGGESFRLLWSRQIHGIGTGD*RFYTAV
Trigger: CACTGCAGTGTAAAATCTCCAGTCTCCAGTCCCAAT...TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCAATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATACTGGCTGCCGGACTaGAAAGCGTGGATCTGTTAT +
Preference number: 4 (lower is better)
Translates to: LVSPNPRKNSFPGSKPLTYWLPD*KAWICY
Trigger: ATAACAGATCCACGCTTTCCAGTCCGGCAGCCAGTA...TGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACTACTGGCTGCCGGACTaGAAAGCGTGGATCTGTTAT +
Preference number: 4 (lower is better)
Translates to: WRWGILQTALVSPNPRKNYWLPD*KAWICY
Trigger: ATAACAGATCCACGCTTTCCAGTCCGGCAGCCAGTA...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGCCGTCCCAGCGCAATAGCTCCCATCATCTaGTTCTTGTTTAATACCCAC +
Preference number: 4 (lower is better)
Translates to: PVSMPFRLNLAKMGRPSAIAPII*FLFNTH
Trigger: GTGGGTATTAAACAAGAACCAGATGATGGGAGCTAT...TGCGCTGGGACGGCCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCAGGGATGCTGGCCTCTaGGTAATAGCTCCCATCATC +
Preference number: 4 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSRDAGL*VIAPII
Trigger: GATGATGGGAGCTATTACCCAGAGGCCAGCATCCCT...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGCAGAGGAAGGGATGCTaGCCTCTGGGTAATAGCTCC +
Preference number: 4 (lower is better)
Translates to: LDMAFHPEEQEHVSKRWGQRKGC*PLGNSS
Trigger: GGAGCTATTACCCAGAGGCCAGCATCCCTTCCTCTG...CCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp GAGGGCTCAGAGGCAGCTGCTGCCCCACGCCACGAGTTCTGTTATTACACAACAAAGGAACTCAGGTGTTaGAAAGATTGGTCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: EGSEAAAAPRHEFCYYTTKELRC*KDWSLA
Trigger: GGCTAGAGACCAATCTTTCCAACACCTGAGTTCCTT...TGTTGTGTAATAACAGAACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACGCCCACTTCACGACTTaGATCATCTGTTTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: WRWGILQTALVSPNPRKNAHFTT*IICLPA
Trigger: AGCAGGCAAACAGATGATCCAAGTCGTGAAGTGGGC...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp GAGGGCTCAGAGGCAGCTGCTGCCCCACGCCACGAGTTCTGTTATTACACAACAATTTGGTGCATCCCCTaGCATAGTTCATACATGGCA +
Preference number: 4 (lower is better)
Translates to: EGSEAAAAPRHEFCYYTTIWCIP*HSSYMA
Trigger: TGCCATGTATGAACTATGCCAGGGGATGCACCAAAT...TGTTGTGTAATAACAGAACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp GGGATTGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGATCTTCAAATGCAGCCTaGCTTTTGAGGCCATCCTTT +
Preference number: 4 (lower is better)
Translates to: GIGGGESFRLLWSRQIHGSSNAA*LLRPSF
Trigger: AAAGGATGGCCTCAAAAGCCAGGCTGCATTTGAAGA...TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCAATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCTCACCAGGTCATGCATaGAGTCCAGCAGCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSSPGHA*SPAAWS
Trigger: TGACCAAGCTGCTGGACTCCATGCATGACCTGGTGA...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATGGGTCCTTCTGGGTGTaGAACAACACAGGGAAACTT +
Preference number: 4 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNGSFWV*NNTGKL
Trigger: AAGTTTCCCTGTGTTGTTCCACACCCAGAAGGACCC...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CCAGAAAACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAGGGTCCTTCTGGGTGTaGAACAACACAGGGAAACTT +
Preference number: 4 (lower is better)
Translates to: PENVLESHKCPKRETKNKGSFWV*NNTGKL
Trigger: AAGTTTCCCTGTGTTGTTCCACACCCAGAAGGACCC...TTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGTTTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACGGGTCCTTCTGGGTGTaGAACAACACAGGGAAACTT +
Preference number: 4 (lower is better)
Translates to: WRWGILQTALVSPNPRKNGSFWV*NNTGKL
Trigger: AAGTTTCCCTGTGTTGTTCCACACCCAGAAGGACCC...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCTCCTTCAGACTGCTCTaGTCTCGCCAAATCCACGGA +
Preference number: 4 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSSFRLL*SRQIHG
Trigger: TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGA...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CTAAAACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGTCCTTCAGACTGCTCTaGTCTCGCCAAATCCACGGA +
Preference number: 4 (lower is better)
Translates to: LKPLYLPVSMPFRLNLAKSFRLL*SRQIHG
Trigger: TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGA...CTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGTTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp CTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGCTGGGGGATTGGAGGTaGGGAATCCTTCAGACTGCT +
Preference number: 4 (lower is better)
Translates to: LDMAFHPEEQEHVSKRWGLGDWR*GILQTA
Trigger: AGCAGTCTGAAGGATTCCCCACCTCCAATCCCCCAG...CCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCCGATTATTGTCTTGCTaGAGGCAAGGGAGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSRLLSC*RQGSSS
Trigger: AGAACTACTCCCTTGCCTTCAGCAAGACAATAATCG...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGCTCAGCTACAGTTGCTaGAAGTTCCTTAGATTCCAG +
Preference number: 4 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLLSYSC*KFLRFQ
Trigger: CTGGAATCTAAGGAACTTTCAGCAACTGTAGCTGAG...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCCTCAGCTACAGTTGCTaGAAGTTCCTTAGATTCCAG +
Preference number: 4 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSLSYSC*KFLRFQ
Trigger: CTGGAATCTAAGGAACTTTCAGCAACTGTAGCTGAG...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGAGAGTCAGACATAAATaGTCTCAAGGGCGTGTTCAC +
Preference number: 4 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLRVRHK*SQGRVH
Trigger: GTGAACACGCCCTTGAGATCATTTATGTCTGACTCT...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp ACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGGACGGGCTTTTCTCATaGCACATGATAGGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: TPLSPGLHAIQTEPCQDGDGLFS*HMIGLL
Trigger: TAAAAGCCCTATCATGTGTCATGAGAAAAGCCCGTC...CCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCGAAGGACTGTCCACCTaGATTCACCCCAACAATAGC +
Preference number: 4 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSEGLST*IHPNNS
Trigger: GCTATTGTTGGGGTGAATTCAGGTGGACAGTCCTTC...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp ACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAACAAAAAGAACCAGTGCTGTGTTaGCCGAGGGTTCTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: TCWSPTNAPSGRPRTKQKEPVLC*PRVLLQ
Trigger: CTGCAAAAGAACCCTCGGTCAACACAGCACTGGTTC...TTTTTGTTTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGACATGTGTTGTCAAATaGCACCTTCCAGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGTCVVK*HLPGAA
Trigger: TGCAGCTCCTGGAAGGTGTCATTTGACAACACATGT...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp CCAGAAAACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAACATGTGTTGTCAAATaGCACCTTCCAGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PENVLESHKCPKRETKNKTCVVK*HLPGAA
Trigger: TGCAGCTCCTGGAAGGTGTCATTTGACAACACATGT...TTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGTTTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCCACTGGGAATCCGCTaGCTTCACAGTTACCATCAA +
Preference number: 4 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSPLGIR*LHSYHQ
Trigger: TTGATGGTAACTGTGAAGGCAGCGGATTCCCAGTGG...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp TTTCCCTTTCTTAAATACACTGTAAACGGTTCATTATGCATGCAGGACATTGCAGGGGGTGGGGGCTGCTaGTGCTGTGGCTGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: FPFLKYTVNGSLCMQDIAGGGGC*CCGCSS
Trigger: CGAGGAGCAGCCACAGCAGCAGCAGCCCCCACCCCC...TGCAATGTCCTGCATGCATAATGAACCGTTTACAGTGTATTTAAGAAAGGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp CCAGAAAACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAATCCTGGAAGTACCTTTaGCCACTTCACGACTTGGAT +
Preference number: 4 (lower is better)
Translates to: PENVLESHKCPKRETKNKSWKYL*PLHDLD
Trigger: ATCCAAGTCGTGAAGTGGGCAAAGGTACTTCCAGGA...TTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGTTTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGCCTCATTTCTTCAAATaGAGCCTGGCTTTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGPHFFK*SLAFEA
Trigger: GGCCTCAAAAGCCAGGCTGCATTTGAAGAAATGAGG...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTGGGCTCAGAGGCAGCTaGTGCCCCACGCCACGAGTT +
Preference number: 4 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVGLRGS*CPTPRV
Trigger: AACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCC...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp AAGATGCTCTCTGAGCCATCAAGTTCCCAGTCTCACTCTCGTAGAGCTGGTTCTATTCAGACTGAACCTTaGCAAGATGGGCCGTCCCAG +
Preference number: 4 (lower is better)
Translates to: KMLSEPSSSQSHSRRAGSIQTEP*QDGPSQ
Trigger: CTGGGACGGCCCATCTTGGCAAGGTTCAGTCTGAAT...AGAACCAGCTCTACGAGAGTGAGACTGGGAACTTGATGGCTCAGAGAGCATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp ACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAACAAAAAATTCAGACTGAACCTTaGCAAGATGGGCCGTCCCAG +
Preference number: 4 (lower is better)
Translates to: TCWSPTNAPSGRPRTKQKIQTEP*QDGPSQ
Trigger: CTGGGACGGCCCATCTTGGCAAGGTTCAGTCTGAAT...TTTTTGTTTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp TGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTCAAGGTAATGTTGCCTaGATGGTGAACCCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: CSGLAKSTEKQLSRLQTSQGNVA*MVNPGE
Trigger: TTCTCCAGGGTTCACCATGCAGGCAACATTACCTTG...AGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp CCAGAAAACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAACAAGGTAATGTTGCCTaGATGGTGAACCCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: PENVLESHKCPKRETKNKQGNVA*MVNPGE
Trigger: TTCTCCAGGGTTCACCATGCAGGCAACATTACCTTG...TTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGTTTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp ACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAACAAAAAGAAAACTGCCAAAGCTaGCTGTGGTGGAGGACACAG +
Preference number: 4 (lower is better)
Translates to: TCWSPTNAPSGRPRTKQKENCQS*LWWRTQ
Trigger: CTGTGTCCTCCACCACAGCCAGCTTTGGCAGTTTTC...TTTTTGTTTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGGATTGGGCTGTGCACTaGAAAACTGCCAAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LDMAFHPEEQEHVSKRWGDWAVH*KTAKAG
Trigger: GCCAGCTTTGGCAGTTTTCCAGTGCACAGCCCAATC...CCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp AAGATGCTCTCTGAGCCATCAAGTTCCCAGTCTCACTCTCGTAGAGCTGGTTCTCAGGGCTGTGCGACCTaGAGCCTCGATTTTCAACAT +
Preference number: 4 (lower is better)
Translates to: KMLSEPSSSQSHSRRAGSQGCAT*SLDFQH
Trigger: ATGTTGAAAATCGAGGCTCCAGGTCGCACAGCCCTG...AGAACCAGCTCTACGAGAGTGAGACTGGGAACTTGATGGCTCAGAGAGCATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAGTGACTTGGAGGGCTaGAAATTGAGGATTTCATGC +
Preference number: 4 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSSDLEG*KLRISC
Trigger: GCATGAAATCCTCAATTTCCAGCCCTCCAAGTCACT...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp ACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGAGTGACTTGGAGGGCTaGAAATTGAGGATTTCATGC +
Preference number: 4 (lower is better)
Translates to: TPLSPGLHAIQTEPCQDGSDLEG*KLRISC
Trigger: GCATGAAATCCTCAATTTCCAGCCCTCCAAGTCACT...CCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCATTGGGACTGGAGACTaGAGATTTTACACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSIGTGD*RFYTAV
Trigger: CACTGCAGTGTAAAATCTCCAGTCTCCAGTCCCAAT...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGATTGGGACTGGAGACTaGAGATTTTACACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLIGTGD*RFYTAV
Trigger: CACTGCAGTGTAAAATCTCCAGTCTCCAGTCCCAAT...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCTACTGGCTGCCGGACTaGAAAGCGTGGATCTGTTAT +
Preference number: 4 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSYWLPD*KAWICY
Trigger: ATAACAGATCCACGCTTTCCAGTCCGGCAGCCAGTA...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCCGAGCCATCCATAAATaGAAACGGGTTTACTGTTGG +
Preference number: 4 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSRAIHK*KRVYCW
Trigger: CCAACAGTAAACCCGTTTCCATTTATGGATGGCTCG...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp ACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGCGAGCCATCCATAAATaGAAACGGGTTTACTGTTGG +
Preference number: 4 (lower is better)
Translates to: TPLSPGLHAIQTEPCQDGRAIHK*KRVYCW
Trigger: CCAACAGTAAACCCGTTTCCATTTATGGATGGCTCG...CCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGAAGGAACTCAGGTGTTaGAAAGATTGGTCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLKELRC*KDWSLA
Trigger: GGCTAGAGACCAATCTTTCCAACACCTGAGTTCCTT...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGATTTGGTGCATCCCCTaGCATAGTTCATACATGGCA +
Preference number: 4 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLIWCIP*HSSYMA
Trigger: TGCCATGTATGAACTATGCCAGGGGATGCACCAAAT...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCTGGAGTCCAGCAGCTTaGTCAGTTGGTAGAACCTCT +
Preference number: 4 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSWSPAA*SVGRTS
Trigger: AGAGGTTCTACCAACTGACCAAGCTGCTGGACTCCA...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGTCCACCTTGGGCAGCTaGTCGCTGATGATCTCCACC +
Preference number: 4 (lower is better)
Translates to: STEKQLSRLQTSDMTLNLSTLGS*SLMIST
Trigger: GGTGGAGATCATCAGCGACCAGCTGCCCAAGGTGGA...CAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp ACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAACAAAAAAAGGCAAAGTTCTTCTaGGCAGCGGGCAGTCACTTC +
Preference number: 4 (lower is better)
Translates to: TCWSPTNAPSGRPRTKQKKAKFF*AAGSHF
Trigger: GAAGTGACTGCCCGCTGCCCAGAAGAACTTTGCCTT...TTTTTGTTTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGT
51% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp AAGATGCTCTCTGAGCCATCAAGTTCCCAGTCTCACTCTCGTAGAGCTGGTTCTAGCCAGAAAACGTGCTaGAGTCCCACAAATGCCCCA +
Preference number: 4 (lower is better)
Translates to: KMLSEPSSSQSHSRRAGSSQKTC*SPTNAP
Trigger: TGGGGCATTTGTGGGACTCCAGCACGTTTTCTGGCT...AGAACCAGCTCTACGAGAGTGAGACTGGGAACTTGATGGCTCAGAGAGCATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACCTCAGCTACAGTTGCTaGAAGTTCCTTAGATTCCAG +
Preference number: 4 (lower is better)
Translates to: WRWGILQTALVSPNPRKNLSYSC*KFLRFQ
Trigger: CTGGAATCTAAGGAACTTTCAGCAACTGTAGCTGAG...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGAGAGTCAGACATAAATaGTCTCAAGGGCGTGTTCAC +
Preference number: 4 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGRVRHK*SQGRVH
Trigger: GTGAACACGCCCTTGAGATCATTTATGTCTGACTCT...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp CTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACAAGAGTCAGACATAAATaGTCTCAAGGGCGTGTTCAC +
Preference number: 4 (lower is better)
Translates to: LVSPNPRKNSFPGSKPLTRVRHK*SQGRVH
Trigger: GTGAACACGCCCTTGAGATCATTTATGTCTGACTCT...TGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp TGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTAGAGTCAGACATAAATaGTCTCAAGGGCGTGTTCAC +
Preference number: 4 (lower is better)
Translates to: CSGLAKSTEKQLSRLQTSRVRHK*SQGRVH
Trigger: GTGAACACGCCCTTGAGATCATTTATGTCTGACTCT...AGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp AAGATGCTCTCTGAGCCATCAAGTTCCCAGTCTCACTCTCGTAGAGCTGGTTCTGCCAGTCACACCATTTaGGATGGCACTCTCTACTTC +
Preference number: 4 (lower is better)
Translates to: KMLSEPSSSQSHSRRAGSASHTI*DGTLYF
Trigger: GAAGTAGAGAGTGCCATCTCAAATGGTGTGACTGGC...AGAACCAGCTCTACGAGAGTGAGACTGGGAACTTGATGGCTCAGAGAGCATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp TCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGTGCAGCTGCCACAGGTaGCTACCCCATAATGGCATC +
Preference number: 4 (lower is better)
Translates to: STEKQLSRLQTSDMTLNLCSCHR*LPHNGI
Trigger: GATGCCATTATGGGGTAGTCACCTGTGGCAGCTGCA...CAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACTGTATTCTTCAAAGGTaGGCTGCAGTCGAACGAACT +
Preference number: 4 (lower is better)
Translates to: WRWGILQTALVSPNPRKNCILQR*AAVERT
Trigger: AGTTCGTTCGACTGCAGCTCACCTTTGAAGAATACA...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp AACCTCTGCCAGCTCTGCCCAGAATTGTTGGGACACTTAGTTACCATCTTCCTCATGCAGCCTGGCTTTTaGGGCCATCCTTTGGAATTG +
Preference number: 4 (lower is better)
Translates to: NLCQLCPELLGHLVTIFLMQPGF*GHPLEL
Trigger: CAATTCCAAAGGATGGCCTCAAAAGCCAGGCTGCAT...GAGGAAGATGGTAACTAAGTGTCCCAACAATTCTGGGCAGAGCTGGCAGAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342437.8
CDS-3UTR TCA 90 bp CTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATGCAGCCTGGCTTTTaGGGCCATCCTTTGGAATTG +
Preference number: 4 (lower is better)
Translates to: LDMAFHPEEQEHVSKRWGMQPGF*GHPLEL
Trigger: CAATTCCAAAGGATGGCCTCAAAAGCCAGGCTGCAT...CCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACGTTCGTTAGTCCTTaGACCCTTTTAAAACAAGCG +
Preference number: 4 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLTFVSP*TLLKQA
Trigger: CGCTTGTTTTAAAAGGGTTCAAGGACTAACGAACGT...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp ACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGACGTTCGTTAGTCCTTaGACCCTTTTAAAACAAGCG +
Preference number: 4 (lower is better)
Translates to: TPLSPGLHAIQTEPCQDGTFVSP*TLLKQA
Trigger: CGCTTGTTTTAAAAGGGTTCAAGGACTAACGAACGT...CCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCTCAGAAGGGAATAGCTaGTCTTTAACAGAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSSEGNS*SLTERE
Trigger: CTCTCTCTCTGTTAAAGATCAGCTATTCCCTTCTGA...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCATGTTGCCTGCATGGTaGACCCTGGAGAAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSMLPAW*TLEKSV
Trigger: AACACTTTTCTCCAGGGTTCACCATGCAGGCAACAT...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp CTAAAACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGAAAAACTCCTCCCTCTaGGTGCAGCTTTCACAGGTT +
Preference number: 4 (lower is better)
Translates to: LKPLYLPVSMPFRLNLAKKNSSL*VQLSQV
Trigger: AACCTGTGAAAGCTGCACTCAGAGGGAGGAGTTTTT...CTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGTTTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp AAGATGCTCTCTGAGCCATCAAGTTCCCAGTCTCACTCTCGTAGAGCTGGTTCTTGGGTGATTGGGCTGTaGACTGGAAAACTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: KMLSEPSSSQSHSRRAGSWVIGL*TGKLPK
Trigger: CTTTGGCAGTTTTCCAGTGCACAGCCCAATCACCCA...AGAACCAGCTCTACGAGAGTGAGACTGGGAACTTGATGGCTCAGAGAGCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp AAGATGCTCTCTGAGCCATCAAGTTCCCAGTCTCACTCTCGTAGAGCTGGTTCTCTGGAGATTTTACACTaGAGTGACTTGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KMLSEPSSSQSHSRRAGSLEILH*SDLEGW
Trigger: CCAGCCCTCCAAGTCACTGCAGTGTAAAATCTCCAG...AGAACCAGCTCTACGAGAGTGAGACTGGGAACTTGATGGCTCAGAGAGCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp ACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAACAAAAACCACTGGGAATCCGCTaGCTTCACAGTTACCATCAA +
Preference number: 4 (lower is better)
Translates to: TCWSPTNAPSGRPRTKQKPLGIR*LHSYHQ
Trigger: TTGATGGTAACTGTGAAGGCAGCGGATTCCCAGTGG...TTTTTGTTTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTCTCAGAGGCAGCTGCTaGCCCACGCCACGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVLRGSC*PTPRVL
Trigger: CAGAACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAG...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp GAGGGCTCAGAGGCAGCTGCTGCCCCACGCCACGAGTTCTGTTATTACACAACAGTAAACGGTTCATTATaGATGCAGGACATTGCACTT +
Preference number: 4 (lower is better)
Translates to: EGSEAAAAPRHEFCYYTTVNGSL*MQDIAL
Trigger: AAGTGCAATGTCCTGCATGCATAATGAACCGTTTAC...TGTTGTGTAATAACAGAACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp ACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGACTGGAGTCCCACAAATaGCCCAAGCGGGAGACCAAG +
Preference number: 4 (lower is better)
Translates to: TEKQLSRLQTSDMTLNLRLESHK*PKRETK
Trigger: CTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAG...TCTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACCTGGAGTCCCACAAATaGCCCAAGCGGGAGACCAAG +
Preference number: 4 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNLESHK*PKRETK
Trigger: CTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAG...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGAATGGGAGGAAAAGATaGTCTCTGAGCCATCAAGTT +
Preference number: 4 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLNGRKR*SLSHQV
Trigger: AACTTGATGGCTCAGAGAGCATCTTTTCCTCCCATT...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp TCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGTCCTGCCATGATCTGTaGGTTCCTGTGACCGGTTCC +
Preference number: 4 (lower is better)
Translates to: STEKQLSRLQTSDMTLNLSCHDL*VPVTGS
Trigger: GGAACCGGTCACAGGAACGCACAGATCATGGCAGGA...CAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCGTTGATCTAATTAATTaGTGCTTCCTCGTGGCCATG +
Preference number: 4 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSVDLIN*CFLVAM
Trigger: CATGGCCACGAGGAAGCAGCAATTAATTAGATCAAC...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp TCAGAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTCGCCGTCTACCTGTTaGAGCGCTTGCCACCGCCAC +
Preference number: 4 (lower is better)
Translates to: SELLTRYGFSSRGTGTCFSPSTC*SACHRH
Trigger: GTGGCGGTGGCAAGCGCTGCAACAGGTAGACGGCGA...GAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAGTCAATAACTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342437.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGCCATATATAAACCCATaGACTCAGCTACAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLPYINP*TQLQLL
Trigger: CAGCAACTGTAGCTGAGTCCATGGGTTTATATATGG...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp GGGATTGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGACTGATAAATCTTAGCTaGACTCATGCTTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GIGGGESFRLLWSRQIHGLINLS*THASLL
Trigger: CAACAAGGAAGCATGAGTCCAGCTAAGATTTATCAG...TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGTCACACAACTTAGAGTaGAAGGACGATGGCCATTTC +
Preference number: 4 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGSHNLE*KDDGHF
Trigger: GAAATGGCCATCGTCCTTCCACTCTAAGTTGTGTGA...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATTCACACAACTTAGAGTaGAAGGACGATGGCCATTTC +
Preference number: 4 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNSHNLE*KDDGHF
Trigger: GAAATGGCCATCGTCCTTCCACTCTAAGTTGTGTGA...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CCAGAAAACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAATTGGGACTGGAGACTaGAGATTTTACACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: PENVLESHKCPKRETKNKIGTGD*RFYTAV
Trigger: CACTGCAGTGTAAAATCTCCAGTCTCCAGTCCCAAT...TTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGTTTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGCATCCCGCAATGTACTaGATCCAGCAGAGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: STEKQLSRLQTSDMTLNLHPAMY*IQQRCQ
Trigger: CTGGCACCTCTGCTGGATCCAGTACATTGCGGGATG...CAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp GGGATTGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAGCTCCATCTGGTTCTaGTTTTATGTACTGGACAAT +
Preference number: 4 (lower is better)
Translates to: GIGGGESFRLLWSRQIHGSSIWF*FYVLDN
Trigger: ATTGTCCAGTACATAAAACCAGAACCAGATGGAGCT...TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGCGAGCCATCCATAAATaGAAACGGGTTTACTGTTGG +
Preference number: 4 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGRAIHK*KRVYCW
Trigger: CCAACAGTAAACCCGTTTCCATTTATGGATGGCTCG...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACCGAGCCATCCATAAATaGAAACGGGTTTACTGTTGG +
Preference number: 4 (lower is better)
Translates to: WRWGILQTALVSPNPRKNRAIHK*KRVYCW
Trigger: CCAACAGTAAACCCGTTTCCATTTATGGATGGCTCG...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACTTGTTTAATACCCACTaGGAATCCGCTGCCTTCACA +
Preference number: 4 (lower is better)
Translates to: WRWGILQTALVSPNPRKNLFNTH*ESAAFT
Trigger: TGTGAAGGCAGCGGATTCCCAGTGGGTATTAAACAA...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGAGGTGTTGGAAAGATTaGTCTCTAGCCGATCGTGAT +
Preference number: 4 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGRCWKD*SLADRD
Trigger: ATCACGATCGGCTAGAGACCAATCTTTCCAACACCT...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATAAGGAACTCAGGTGTTaGAAAGATTGGTCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNKELRC*KDWSLA
Trigger: GGCTAGAGACCAATCTTTCCAACACCTGAGTTCCTT...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp GAGGGCTCAGAGGCAGCTGCTGCCCCACGCCACGAGTTCTGTTATTACACAACATGGATTAGGGTAATTTaGTCCTCAAGAGGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: EGSEAAAAPRHEFCYYTTWIRVI*SSRGKF
Trigger: AAACTTGCCTCTTGAGGACCAAATTACCCTAATCCA...TGTTGTGTAATAACAGAACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGATTTGGTGCATCCCCTaGCATAGTTCATACATGGCA +
Preference number: 4 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGIWCIP*HSSYMA
Trigger: TGCCATGTATGAACTATGCCAGGGGATGCACCAAAT...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTTCTTCAAATGCAGCCTaGCTTTTGAGGCCATCCTTT +
Preference number: 4 (lower is better)
Translates to: CSGLAKSTEKQLSRLQTSSSNAA*LLRPSF
Trigger: AAAGGATGGCCTCAAAAGCCAGGCTGCATTTGAAGA...AGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGGGGTCCTTCTGGGTGTaGAACAACACAGGGAAACTT +
Preference number: 4 (lower is better)
Translates to: LDMAFHPEEQEHVSKRWGGSFWV*NNTGKL
Trigger: AAGTTTCCCTGTGTTGTTCCACACCCAGAAGGACCC...CCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAG
50% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATCAAGCAAAGTTACCTaGAGACACACAAAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LVSPNPRKNSFPGSKPLTSSKVT*RHTKSQ
Trigger: CTGGCTCTTTGTGTGTCTCCAGGTAACTTTGCTTGA...TGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATACAGACAATTTGGACTaGGACAGGCATTCAACAGTG +
Preference number: 4 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNTDNLD*DRHSTV
Trigger: CACTGTTGAATGCCTGTCCCAGTCCAAATTGTCTGT...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp TCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGGAACCAGTGCTGTGTTaGCCGAGGGTTCTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: STEKQLSRLQTSDMTLNLEPVLC*PRVLLQ
Trigger: CTGCAAAAGAACCCTCGGTCAACACAGCACTGGTTC...CAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp TCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGTGCCTGCTAAGCGGTTaGGCGTGGAGAGCAGATTTT +
Preference number: 4 (lower is better)
Translates to: STEKQLSRLQTSDMTLNLCLLSG*AWRADF
Trigger: AAAATCTGCTCTCCACGCTCAACCGCTTAGCAGGCA...CAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACGAACGAACTGAAGGCTaGTTTGGTGCATCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNERTEG*FGASPG
Trigger: GCCAGGGGATGCACCAAATCAGCCTTCAGTTCGTTC...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp GGGATTGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAACTGTTGAACAAGTGTaGATCAACCATCACATGTTA +
Preference number: 4 (lower is better)
Translates to: GIGGGESFRLLWSRQIHGTVEQV*INHHML
Trigger: TAACATGTGATGGTTGATTCACACTTGTTCAACAGT...TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCAATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp ACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAACAAAAACCGGCTCCAAACCTCTaGCATGACTTTAAACTTGAG +
Preference number: 4 (lower is better)
Translates to: TCWSPTNAPSGRPRTKQKPAPNL*HDFKLE
Trigger: CTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGG...TTTTTGTTTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp CCAGAAAACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAACTGTGCACCGTAAGTTaGCTGTATTTAAAGATCTGC +
Preference number: 4 (lower is better)
Translates to: PENVLESHKCPKRETKNKLCTVS*LYLKIC
Trigger: GCAGATCTTTAAATACAGTCAACTTACGGTGCACAG...TTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGTTTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp AAGATGCTCTCTGAGCCATCAAGTTCCCAGTCTCACTCTCGTAGAGCTGGTTCTTCATGTTCAGAGGGCTaGAAACAGACGGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: KMLSEPSSSQSHSRRAGSSCSEG*KQTGFS
Trigger: AGAAAAGCCCGTCTGTTTGCAGCCCTCTGAACATGA...AGAACCAGCTCTACGAGAGTGAGACTGGGAACTTGATGGCTCAGAGAGCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp TCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGTGTGCACTGGAAAACTaGCAAAGCTGGCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: STEKQLSRLQTSDMTLNLCALEN*QSWLWW
Trigger: CCACCACAGCCAGCTTTGGCAGTTTTCCAGTGCACA...CAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACCACATTGCTAGCATGTaGAGGGCTGTGCGACCTGGA +
Preference number: 4 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNHIASM*RAVRPG
Trigger: TCCAGGTCGCACAGCCCTGCACATGCTAGCAATGTG...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCGTGCCTGAACATGAATaGTTGGTTGATTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSVPEHE*LVDSCF
Trigger: AAAGCAAGAATCAACCAAGCATTCATGTTCAGGCAC...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACGAGCTGAGGAACCAGTaGTGTGTTGACCGAGGGTTC +
Preference number: 4 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNELRNQ*CVDRGF
Trigger: GAACCCTCGGTCAACACAGCACTGGTTCCTCAGCTC...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp CTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACAAATGGGAGGAAAAGATaGTCTCTGAGCCATCAAGTT +
Preference number: 4 (lower is better)
Translates to: LVSPNPRKNSFPGSKPLTNGRKR*SLSHQV
Trigger: AACTTGATGGCTCAGAGAGCATCTTTTCCTCCCATT...TGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAATGGGAGGAAAAGATaGTCTCTGAGCCATCAAGTT +
Preference number: 4 (lower is better)
Translates to: WRWGILQTALVSPNPRKNNGRKR*SLSHQV
Trigger: AACTTGATGGCTCAGAGAGCATCTTTTCCTCCCATT...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGTTGATCTAATTAATTaGTGCTTCCTCGTGGCCATG +
Preference number: 4 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGVDLIN*CFLVAM
Trigger: CATGGCCACGAGGAAGCAGCAATTAATTAGATCAAC...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp CTAAAACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGTCACAGGTTTCCCCTTaGATAAGGCAGGTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: LKPLYLPVSMPFRLNLAKSQVSP*IRQVSF
Trigger: AAAAGACACCTGCCTTATGCAAGGGGAAACCTGTGA...CTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGTTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCCTGATAAATCTTAGCTaGACTCATGCTTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSLINLS*THASLL
Trigger: CAACAAGGAAGCATGAGTCCAGCTAAGATTTATCAG...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGGATTGGGCTGTGCACTaGAAAACTGCCAAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: STEKQLSRLQTSDMTLNLDWAVH*KTAKAG
Trigger: GCCAGCTTTGGCAGTTTTCCAGTGCACAGCCCAATC...CAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATTGGACAATATTAAGCTaGCCAGTCACACCATTTGAG +
Preference number: 4 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNWTILS*PVTPFE
Trigger: CTCAAATGGTGTGACTGGCCAGCTTAATATTGTCCA...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGTGGACAATATTAAGCTaGCCAGTCACACCATTTGAG +
Preference number: 4 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGWTILS*PVTPFE
Trigger: CTCAAATGGTGTGACTGGCCAGCTTAATATTGTCCA...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp ACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGAGCTCCATCTGGTTCTaGTTTTATGTACTGGACAAT +
Preference number: 4 (lower is better)
Translates to: TPLSPGLHAIQTEPCQDGSSIWF*FYVLDN
Trigger: ATTGTCCAGTACATAAAACCAGAACCAGATGGAGCT...CCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp ACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGGCTAAAAGCTCCATCTaGTTCTGGTTTTATGTACTG +
Preference number: 4 (lower is better)
Translates to: TPLSPGLHAIQTEPCQDGAKSSI*FWFYVL
Trigger: CAGTACATAAAACCAGAACCAGATGGAGCTTTTAGC...CCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGATAGCTCCCATCATCTaGTTCTTGTTTAATACCCAC +
Preference number: 4 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLIAPII*FLFNTH
Trigger: GTGGGTATTAAACAAGAACCAGATGATGGGAGCTAT...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TTTGGACTGGGACAGGCATTCAACAGTGAATTTAGAATATGGCTTTGCTGTTTAGGGCTGCTGCTGCTGTaGCTGCTCCTCGTGAATCCC +
Preference number: 4 (lower is better)
Translates to: FGLGQAFNSEFRIWLCCLGLLLL*LLLVNP
Trigger: GGGATTCACGAGGAGCAGCCACAGCAGCAGCAGCCC...TAAACAGCAAAGCCATATTCTAAATTCACTGTTGAATGCCTGTCCCAGTCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp ACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGTGGATTAGGGTAATTTaGTCCTCAAGAGGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: TPLSPGLHAIQTEPCQDGWIRVI*SSRGKF
Trigger: AAACTTGCCTCTTGAGGACCAAATTACCCTAATCCA...CCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGCACATCCAAGAATACTaGATTAGGGTAATTTGGTCC +
Preference number: 4 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLHIQEY*IRVIWS
Trigger: GGACCAAATTACCCTAATCCAGTATTCTTGGATGTG...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACAGGCATAGTTCATACATaGCAGACTGATGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: LVSPNPRKNSFPGSKPLTGIVHT*QTDASS
Trigger: AGAAGATGCATCAGTCTGCCATGTATGAACTATGCC...TGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CCAGAAAACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAGGCATAGTTCATACATaGCAGACTGATGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: PENVLESHKCPKRETKNKGIVHT*QTDASS
Trigger: AGAAGATGCATCAGTCTGCCATGTATGAACTATGCC...TTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGTTTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TCAGAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCGGAAGTAGAGCGGCTTaGCGTTCCCCGACTCCACCT +
Preference number: 4 (lower is better)
Translates to: SELLTRYGFSSRGTGTCFGSRAA*RSPTPP
Trigger: AGGTGGAGTCGGGGAACGCCAAGCCGCTCTACTTCC...GAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAGTCAATAACTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATAAAAACAGGTTTTCTTaGGTCCTTCTGGGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNKNRFS*VLLGVE
Trigger: TTCCACACCCAGAAGGACCCAAGAAAACCTGTTTTT...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp ACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGACTGGGGGATTGGAGGTaGGGAATCCTTCAGACTGCT +
Preference number: 4 (lower is better)
Translates to: TEKQLSRLQTSDMTLNLRLGDWR*GILQTA
Trigger: AGCAGTCTGAAGGATTCCCCACCTCCAATCCCCCAG...TCTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGCCAGAAAACGTGCTaGAGTCCCACAAATGCCCCA +
Preference number: 4 (lower is better)
Translates to: STEKQLSRLQTSDMTLNLSQKTC*SPTNAP
Trigger: TGGGGCATTTGTGGGACTCCAGCACGTTTTCTGGCT...CAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp ACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGAATTGCTGCTTCCTCGTaGCCATGGGCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: TEKQLSRLQTSDMTLNLRIAASS*PWASPA
Trigger: AGCTGGAGAAGCCCATGGCCACGAGGAAGCAGCAAT...TCTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCTCAAGCAAAGTTACCTaGAGACACACAAAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSSSKVT*RHTKSQ
Trigger: CTGGCTCTTTGTGTGTCTCCAGGTAACTTTGCTTGA...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp CTAAAACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGACAGACAATTTGGACTaGGACAGGCATTCAACAGTG +
Preference number: 4 (lower is better)
Translates to: LKPLYLPVSMPFRLNLAKTDNLD*DRHSTV
Trigger: CACTGTTGAATGCCTGTCCCAGTCCAAATTGTCTGT...CTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGTTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACACAGCTTACGTTaGCAATCTCCATGTAGTTAT +
Preference number: 4 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSKHSLR*QSPCSY
Trigger: ATAACTACATGGAGATTGTCAACGTAAGCTGTGTTT...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGAAACACAGCTTACGTTaGCAATCTCCATGTAGTTAT +
Preference number: 4 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLKHSLR*QSPCSY
Trigger: ATAACTACATGGAGATTGTCAACGTAAGCTGTGTTT...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp CTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGGACGGGCTTTTCTCATaGCACATGATAGGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: LDMAFHPEEQEHVSKRWGDGLFS*HMIGLL
Trigger: TAAAAGCCCTATCATGTGTCATGAGAAAAGCCCGTC...CCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp ACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAACAAAAATGTATTCTTCAAAGGTaGGCTGCAGTCGAACGAACT +
Preference number: 4 (lower is better)
Translates to: TCWSPTNAPSGRPRTKQKCILQR*AAVERT
Trigger: AGTTCGTTCGACTGCAGCTCACCTTTGAAGAATACA...TTTTTGTTTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp ACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGAACTTGAGAAACTGTTaGACAAGTGTGAATCAACCA +
Preference number: 4 (lower is better)
Translates to: TPLSPGLHAIQTEPCQDGNLRNC*TSVNQP
Trigger: TGGTTGATTCACACTTGTTCAACAGTTTCTCAAGTT...CCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCGTTAATACAAAAAGCTaGTGCAGACCATCTCCATCC +
Preference number: 4 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSVNTKS*CRPSPS
Trigger: GGATGGAGATGGTCTGCATCAGCTTTTTGTATTAAC...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp GGGATTGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGATGCTTGGTTGATTCTTaGTTTATTGGTACTGAGAAT +
Preference number: 4 (lower is better)
Translates to: GIGGGESFRLLWSRQIHGCLVDS*FIGTEN
Trigger: ATTCTCAGTACCAATAAAGCAAGAATCAACCAAGCA...TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCAATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGCATCCTTTGGAATTGTaGTTAGTAGCAGCAAAACTT +
Preference number: 4 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLHPLEL*LVAAKL
Trigger: AAGTTTTGCTGCTACTAAGCACAATTCCAAAGGATG...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp ACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGAGATCTCCACCAGCATTaGGGGGAACTCTACCTTCAG +
Preference number: 4 (lower is better)
Translates to: TEKQLSRLQTSDMTLNLRDLHQH*GELYLQ
Trigger: CTGAAGGTAGAGTTCCCCGCAATGCTGGTGGAGATC...TCTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp CTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACAACGGTTCATTATGCATaGAGGACATTGCACTTTACA +
Preference number: 4 (lower is better)
Translates to: LVSPNPRKNSFPGSKPLTTVHYA*RTLHFT
Trigger: TGTAAAGTGCAATGTCCTGCATGCATAATGAACCGT...TGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGACGGTTCATTATGCATaGAGGACATTGCACTTTACA +
Preference number: 4 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGTVHYA*RTLHFT
Trigger: TGTAAAGTGCAATGTCCTGCATGCATAATGAACCGT...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGTAAACGGTTCATTATaGATGCAGGACATTGCACTT +
Preference number: 4 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGVNGSL*MQDIAL
Trigger: AAGTGCAATGTCCTGCATGCATAATGAACCGTTTAC...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTCGTCCCAGCGCATCCTaGCATGATCTGTGCGTTCCT +
Preference number: 4 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVRPSAS*HDLCVP
Trigger: AGGAACGCACAGATCATGGCAGGATGCGCTGGGACG...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp GGGATTGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGACATACATTGCATCAGTaGCAAACAAACAGATTAATG +
Preference number: 4 (lower is better)
Translates to: GIGGGESFRLLWSRQIHGHTLHQ*QTNRLM
Trigger: CATTAATCTGTTTGTTTGGCACTGATGCAATGTATG...TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCAATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATAACTCCCAGTCTGCATaGTGTGTATTTATTACCTTC +
Preference number: 4 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNNSQSA*CVFITF
Trigger: GAAGGTAATAAATACACAGCATGCAGACTGGGAGTT...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCCTGCTTACAGTCCTTTaGAAAGACAGACATATGTTT +
Preference number: 4 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSLLTVL*KDRHMF
Trigger: AAACATATGTCTGTCTTTGCAAAGGACTGTAAGCAG...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp CCAGAAAACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAATTGAGTACTGTTGTTTaGAATAGCACCGGAAACACA +
Preference number: 4 (lower is better)
Translates to: PENVLESHKCPKRETKNKLSTVV*NSTGNT
Trigger: TGTGTTTCCGGTGCTATTCCAAACAACAGTACTCAA...TTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGTTTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CTAAAACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGCCATATATAAACCCATaGACTCAGCTACAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: LKPLYLPVSMPFRLNLAKPYINP*TQLQLL
Trigger: CAGCAACTGTAGCTGAGTCCATGGGTTTATATATGG...CTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGTTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACCTGATAAATCTTAGCTaGACTCATGCTTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: WRWGILQTALVSPNPRKNLINLS*THASLL
Trigger: CAACAAGGAAGCATGAGTCCAGCTAAGATTTATCAG...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp ACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGAGAAAACTGCCAAAGCTaGCTGTGGTGGAGGACACAG +
Preference number: 4 (lower is better)
Translates to: TEKQLSRLQTSDMTLNLRENCQS*LWWRTQ
Trigger: CTGTGTCCTCCACCACAGCCAGCTTTGGCAGTTTTC...TCTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TCAGAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCCCTGCGTGTCTGGACTaGGAACCACATCCCGCAATG +
Preference number: 4 (lower is better)
Translates to: SELLTRYGFSSRGTGTCFPACLD*EPHPAM
Trigger: CATTGCGGGATGTGGTTCCCAGTCCAGACACGCAGG...GAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAGTCAATAACTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCTGGACAATATTAAGCTaGCCAGTCACACCATTTGAG +
Preference number: 4 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSWTILS*PVTPFE
Trigger: CTCAAATGGTGTGACTGGCCAGCTTAATATTGTCCA...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGTCTGGTTTTATGTACTaGACAATATTAAGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLSGFMY*TILSWP
Trigger: TGGCCAGCTTAATATTGTCCAGTACATAAAACCAGA...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATGCTAAAAGCTCCATCTaGTTCTGGTTTTATGTACTG +
Preference number: 4 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNAKSSI*FWFYVL
Trigger: CAGTACATAAAACCAGAACCAGATGGAGCTTTTAGC...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACGCTAAAAGCTCCATCTaGTTCTGGTTTTATGTACTG +
Preference number: 4 (lower is better)
Translates to: WRWGILQTALVSPNPRKNAKSSI*FWFYVL
Trigger: CAGTACATAAAACCAGAACCAGATGGAGCTTTTAGC...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGCTAAAAGCTCCATCTaGTTCTGGTTTTATGTACTG +
Preference number: 4 (lower is better)
Translates to: CSGLAKSTEKQLSRLQTSAKSSI*FWFYVL
Trigger: CAGTACATAAAACCAGAACCAGATGGAGCTTTTAGC...AGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp ACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGAAGGGATGCTGGCCTCTaGGTAATAGCTCCCATCATC +
Preference number: 4 (lower is better)
Translates to: TEKQLSRLQTSDMTLNLRRDAGL*VIAPII
Trigger: GATGATGGGAGCTATTACCCAGAGGCCAGCATCCCT...TCTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGAAGGAACTCAGGTGTTaGAAAGATTGGTCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: LDMAFHPEEQEHVSKRWGKELRC*KDWSLA
Trigger: GGCTAGAGACCAATCTTTCCAACACCTGAGTTCCTT...CCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATTGGATTAGGGTAATTTaGTCCTCAAGAGGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNWIRVI*SSRGKF
Trigger: AAACTTGCCTCTTGAGGACCAAATTACCCTAATCCA...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CTAAAACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGGGCATAGTTCATACATaGCAGACTGATGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: LKPLYLPVSMPFRLNLAKGIVHT*QTDASS
Trigger: AGAAGATGCATCAGTCTGCCATGTATGAACTATGCC...CTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGTTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp CTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTTGGTGCATCCCCTaGCATAGTTCATACATGGCA +
Preference number: 4 (lower is better)
Translates to: LDMAFHPEEQEHVSKRWGIWCIP*HSSYMA
Trigger: TGCCATGTATGAACTATGCCAGGGGATGCACCAAAT...CCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TCAGAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTCCACCTTGGGCAGCTaGTCGCTGATGATCTCCACC +
Preference number: 4 (lower is better)
Translates to: SELLTRYGFSSRGTGTCFSTLGS*SLMIST
Trigger: GGTGGAGATCATCAGCGACCAGCTGCCCAAGGTGGA...GAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAGTCAATAACTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TTTGGACTGGGACAGGCATTCAACAGTGAATTTAGAATATGGCTTTGCTGTTTAGGAAGTAGAGCGGCTTaGCGTTCCCCGACTCCACCT +
Preference number: 4 (lower is better)
Translates to: FGLGQAFNSEFRIWLCCLGSRAA*RSPTPP
Trigger: AGGTGGAGTCGGGGAACGCCAAGCCGCTCTACTTCC...TAAACAGCAAAGCCATATTCTAAATTCACTGTTGAATGCCTGTCCCAGTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACAGCCAGAAAACGTGCTaGAGTCCCACAAATGCCCCA +
Preference number: 4 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNSQKTC*SPTNAP
Trigger: TGGGGCATTTGTGGGACTCCAGCACGTTTTCTGGCT...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCCATATGTTTGTGATTTaGGGCAAGAGAAAAGCCATA +
Preference number: 4 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSHMFVI*GKRKAI
Trigger: TATGGCTTTTCTCTTGCCCCAAATCACAAACATATG...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp GAGGGCTCAGAGGCAGCTGCTGCCCCACGCCACGAGTTCTGTTATTACACAACAATTACCTTCAAAGTGTaGCTTTCATATTACTGTGCA +
Preference number: 4 (lower is better)
Translates to: EGSEAAAAPRHEFCYYTTITFKV*LSYYCA
Trigger: TGCACAGTAATATGAAAGCCACACTTTGAAGGTAAT...TGTTGTGTAATAACAGAACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp TGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTTCTCCATCCCAAACCTaGTTAAGTAAGTCAGAATTC +
Preference number: 4 (lower is better)
Translates to: CSGLAKSTEKQLSRLQTSSPSQT*LSKSEF
Trigger: GAATTCTGACTTACTTAACCAGGTTTGGGATGGAGA...AGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp CTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGTCAAGCAAAGTTACCTaGAGACACACAAAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LDMAFHPEEQEHVSKRWGSSKVT*RHTKSQ
Trigger: CTGGCTCTTTGTGTGTCTCCAGGTAACTTTGCTTGA...CCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp ACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAACAAAAAACAGACAATTTGGACTaGGACAGGCATTCAACAGTG +
Preference number: 4 (lower is better)
Translates to: TCWSPTNAPSGRPRTKQKTDNLD*DRHSTV
Trigger: CACTGTTGAATGCCTGTCCCAGTCCAAATTGTCTGT...TTTTTGTTTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp CTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGAGCAGACAGACAATTTaGACTGGGACAGGCATTCAA +
Preference number: 4 (lower is better)
Translates to: LDMAFHPEEQEHVSKRWGSRQTI*TGTGIQ
Trigger: TTGAATGCCTGTCCCAGTCCAAATTGTCTGTCTGCT...CCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp TTTGGACTGGGACAGGCATTCAACAGTGAATTTAGAATATGGCTTTGCTGTTTAGAGGAGTTCCCTGGGTaGTTGGGCTGTGCACTGGAA +
Preference number: 4 (lower is better)
Translates to: FGLGQAFNSEFRIWLCCLEEFPG*LGCALE
Trigger: TTCCAGTGCACAGCCCAATCACCCAGGGAACTCCTC...TAAACAGCAAAGCCATATTCTAAATTCACTGTTGAATGCCTGTCCCAGTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp TCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGCAGAGGATCTCAGAGTaGCATTATTGGGACTGGAGA +
Preference number: 4 (lower is better)
Translates to: STEKQLSRLQTSDMTLNLQRISE*HYWDWR
Trigger: TCTCCAGTCCCAATAATGTCACTCTGAGATCCTCTG...CAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp ACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGAGAAGGACTGTCCACCTaGATTCACCCCAACAATAGC +
Preference number: 4 (lower is better)
Translates to: TEKQLSRLQTSDMTLNLREGLST*IHPNNS
Trigger: GCTATTGTTGGGGTGAATTCAGGTGGACAGTCCTTC...TCTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp ACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGAATGCAGCCTGGCTTTTaGGGCCATCCTTTGGAATTG +
Preference number: 4 (lower is better)
Translates to: TEKQLSRLQTSDMTLNLRMQPGF*GHPLEL
Trigger: CAATTCCAAAGGATGGCCTCAAAAGCCAGGCTGCAT...TCTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACACTGTTGAACAAGTGTaGATCAACCATCACATGTTA +
Preference number: 4 (lower is better)
Translates to: WRWGILQTALVSPNPRKNTVEQV*INHHML
Trigger: TAACATGTGATGGTTGATTCACACTTGTTCAACAGT...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp CTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACAACTGTTGAACAAGTGTaGATCAACCATCACATGTTA +
Preference number: 4 (lower is better)
Translates to: LVSPNPRKNSFPGSKPLTTVEQV*INHHML
Trigger: TAACATGTGATGGTTGATTCACACTTGTTCAACAGT...TGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp TGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTAACTTGAGAAACTGTTaGACAAGTGTGAATCAACCA +
Preference number: 4 (lower is better)
Translates to: CSGLAKSTEKQLSRLQTSNLRNC*TSVNQP
Trigger: TGGTTGATTCACACTTGTTCAACAGTTTCTCAAGTT...AGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp TCAGAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCCCCGATGGAGCAGGATaGAGCAGAAGCCAGAAAACG +
Preference number: 4 (lower is better)
Translates to: SELLTRYGFSSRGTGTCFPDGAG*SRSQKT
Trigger: CGTTTTCTGGCTTCTGCTTCATCCTGCTCCATCGGG...GAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAGTCAATAACTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTGGGTGATTGGGCTGTaGACTGGAAAACTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNWVIGL*TGKLPK
Trigger: CTTTGGCAGTTTTCCAGTGCACAGCCCAATCACCCA...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp ACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGATGGGTGATTGGGCTGTaGACTGGAAAACTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: TEKQLSRLQTSDMTLNLRWVIGL*TGKLPK
Trigger: CTTTGGCAGTTTTCCAGTGCACAGCCCAATCACCCA...TCTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp ACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGACTGGAGATTTTACACTaGAGTGACTTGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TEKQLSRLQTSDMTLNLRLEILH*SDLEGW
Trigger: CCAGCCCTCCAAGTCACTGCAGTGTAAAATCTCCAG...TCTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACCTGGAGATTTTACACTaGAGTGACTTGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNLEILH*SDLEGW
Trigger: CCAGCCCTCCAAGTCACTGCAGTGTAAAATCTCCAG...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp CTGCATGCTGTGTATTTATTACCTTCAAAGTGTGGCTTTCATATTACTGTGCACTCCCACAGTACTGGCTaGCGGACTGGAAAGCGTGGA +
Preference number: 4 (lower is better)
Translates to: LHAVYLLPSKCGFHITVHSHSTG*RTGKRG
Trigger: TCCACGCTTTCCAGTCCGGCAGCCAGTACTGTGGGA...GTGCACAGTAATATGAAAGCCACACTTTGAAGGTAATAAATACACAGCATGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp ACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGACCACTGGGAATCCGCTaGCTTCACAGTTACCATCAA +
Preference number: 4 (lower is better)
Translates to: TEKQLSRLQTSDMTLNLRPLGIR*LHSYHQ
Trigger: TTGATGGTAACTGTGAAGGCAGCGGATTCCCAGTGG...TCTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACCATCCTTTGGAATTGTaGTTAGTAGCAGCAAAACTT +
Preference number: 4 (lower is better)
Translates to: WRWGILQTALVSPNPRKNHPLEL*LVAAKL
Trigger: AAGTTTTGCTGCTACTAAGCACAATTCCAAAGGATG...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp TGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTCATCCTTTGGAATTGTaGTTAGTAGCAGCAAAACTT +
Preference number: 4 (lower is better)
Translates to: CSGLAKSTEKQLSRLQTSHPLEL*LVAAKL
Trigger: AAGTTTTGCTGCTACTAAGCACAATTCCAAAGGATG...AGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp CTAAAACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGACGGTTCATTATGCATaGAGGACATTGCACTTTACA +
Preference number: 4 (lower is better)
Translates to: LKPLYLPVSMPFRLNLAKTVHYA*RTLHFT
Trigger: TGTAAAGTGCAATGTCCTGCATGCATAATGAACCGT...CTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGTTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCGTAAACGGTTCATTATaGATGCAGGACATTGCACTT +
Preference number: 4 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSVNGSL*MQDIAL
Trigger: AAGTGCAATGTCCTGCATGCATAATGAACCGTTTAC...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACGACCGGTTCCAGGAGTaGAGAACCTCTTTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNDRFQE*RTSFQD
Trigger: ATCTTGGAAAGAGGTTCTGCACTCCTGGAACCGGTC...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp TTTGGACTGGGACAGGCATTCAACAGTGAATTTAGAATATGGCTTTGCTGTTTACGTCCCAGCGCATCCTaGCATGATCTGTGCGTTCCT +
Preference number: 4 (lower is better)
Translates to: FGLGQAFNSEFRIWLCCLRPSAS*HDLCVP
Trigger: AGGAACGCACAGATCATGGCAGGATGCGCTGGGACG...TAAACAGCAAAGCCATATTCTAAATTCACTGTTGAATGCCTGTCCCAGTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGCATACATTGCATCAGTaGCAAACAAACAGATTAATG +
Preference number: 4 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLHTLHQ*QTNRLM
Trigger: CATTAATCTGTTTGTTTGGCACTGATGCAATGTATG...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp TTTGGACTGGGACAGGCATTCAACAGTGAATTTAGAATATGGCTTTGCTGTTTAAGGCAGCAACGCTCTTaGACCCAGGTGACTGACTGC +
Preference number: 4 (lower is better)
Translates to: FGLGQAFNSEFRIWLCCLRQQRS*TQVTDC
Trigger: GCAGTCAGTCACCTGGGTGCAAGAGCGTTGCTGCCT...TAAACAGCAAAGCCATATTCTAAATTCACTGTTGAATGCCTGTCCCAGTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp CTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGCCATATATAAACCCATaGACTCAGCTACAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: LDMAFHPEEQEHVSKRWGPYINP*TQLQLL
Trigger: CAGCAACTGTAGCTGAGTCCATGGGTTTATATATGG...CCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp AAGATGCTCTCTGAGCCATCAAGTTCCCAGTCTCACTCTCGTAGAGCTGGTTCTCCATATATAAACCCATaGACTCAGCTACAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: KMLSEPSSSQSHSRRAGSPYINP*TQLQLL
Trigger: CAGCAACTGTAGCTGAGTCCATGGGTTTATATATGG...AGAACCAGCTCTACGAGAGTGAGACTGGGAACTTGATGGCTCAGAGAGCATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACAGTTCCCTGGGTGATTaGGCTGTGCACTGGAAAACT +
Preference number: 4 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNSSLGD*AVHWKT
Trigger: AGTTTTCCAGTGCACAGCCCAATCACCCAGGGAACT...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTACTGGCTGCCGGACTaGAAAGCGTGGATCTGTTAT +
Preference number: 4 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNYWLPD*KAWICY
Trigger: ATAACAGATCCACGCTTTCCAGTCCGGCAGCCAGTA...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CTGCATGCTGTGTATTTATTACCTTCAAAGTGTGGCTTTCATATTACTGTGCACCCTGCGTGTCTGGACTaGGAACCACATCCCGCAATG +
Preference number: 4 (lower is better)
Translates to: LHAVYLLPSKCGFHITVHPACLD*EPHPAM
Trigger: CATTGCGGGATGTGGTTCCCAGTCCAGACACGCAGG...GTGCACAGTAATATGAAAGCCACACTTTGAAGGTAATAAATACACAGCATGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp ACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAACAAAAATGGACAATATTAAGCTaGCCAGTCACACCATTTGAG +
Preference number: 4 (lower is better)
Translates to: TCWSPTNAPSGRPRTKQKWTILS*PVTPFE
Trigger: CTCAAATGGTGTGACTGGCCAGCTTAATATTGTCCA...TTTTTGTTTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGAAACGGGTTTACTGTTaGATTCCCTTTAAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGKRVYC*IPFKRG
Trigger: ACCTCTTTTAAAGGGAATCCAACAGTAAACCCGTTT...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCTGGATTAGGGTAATTTaGTCCTCAAGAGGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSWIRVI*SSRGKF
Trigger: AAACTTGCCTCTTGAGGACCAAATTACCCTAATCCA...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGGGCATAGTTCATACATaGCAGACTGATGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: LDMAFHPEEQEHVSKRWGGIVHT*QTDASS
Trigger: AGAAGATGCATCAGTCTGCCATGTATGAACTATGCC...CCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAG
47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp ACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGATTTCTTGGGTCCTTCTaGGTGTGGAACAACACAGGG +
Preference number: 4 (lower is better)
Translates to: TEKQLSRLQTSDMTLNLRFLGSF*VWNNTG
Trigger: CCCTGTGTTGTTCCACACCCAGAAGGACCCAAGAAA...TCTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp ACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAACAAAAAAAAAACAGGTTTTCTTaGGTCCTTCTGGGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: TCWSPTNAPSGRPRTKQKKNRFS*VLLGVE
Trigger: TTCCACACCCAGAAGGACCCAAGAAAACCTGTTTTT...TTTTTGTTTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGT
47% GC, longest homopolymer 10 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp TCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGCTCAGCTACAGTTGCTaGAAGTTCCTTAGATTCCAG +
Preference number: 4 (lower is better)
Translates to: STEKQLSRLQTSDMTLNLLSYSC*KFLRFQ
Trigger: CTGGAATCTAAGGAACTTTCAGCAACTGTAGCTGAG...CAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp TCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGGACGGGCTTTTCTCATaGCACATGATAGGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: STEKQLSRLQTSDMTLNLDGLFS*HMIGLL
Trigger: TAAAAGCCCTATCATGTGTCATGAGAAAAGCCCGTC...CAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp TTTCCCTTTCTTAAATACACTGTAAACGGTTCATTATGCATGCAGGACATTGCAGAGGAGTTCCCTGGGTaGTTGGGCTGTGCACTGGAA +
Preference number: 4 (lower is better)
Translates to: FPFLKYTVNGSLCMQDIAEEFPG*LGCALE
Trigger: TTCCAGTGCACAGCCCAATCACCCAGGGAACTCCTC...TGCAATGTCCTGCATGCATAATGAACCGTTTACAGTGTATTTAAGAAAGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp AAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTGGAAAAGGGACCTCTTaGGCACCTTTCTCCTGCGTG +
Preference number: 4 (lower is better)
Translates to: KGFKTTEEVSVWLFTTETGKGTS*APFSCV
Trigger: CACGCAGGAGAAAGGTGCTCAAGAGGTCCCTTTTCC...AGTCTCTGTTGTAAATAACCACACTGAAACCTCTTCGGTTGTCTTGAAACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp AAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTTGCAGCTGCCACAGGTaGCTACCCCATAATGGCATC +
Preference number: 4 (lower is better)
Translates to: KGFKTTEEVSVWLFTTETCSCHR*LPHNGI
Trigger: GATGCCATTATGGGGTAGTCACCTGTGGCAGCTGCA...AGTCTCTGTTGTAAATAACCACACTGAAACCTCTTCGGTTGTCTTGAAACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp TTTGGACTGGGACAGGCATTCAACAGTGAATTTAGAATATGGCTTTGCTGTTTAGAACGAACTGAAGGCTaGTTTGGTGCATCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: FGLGQAFNSEFRIWLCCLERTEG*FGASPG
Trigger: GCCAGGGGATGCACCAAATCAGCCTTCAGTTCGTTC...TAAACAGCAAAGCCATATTCTAAATTCACTGTTGAATGCCTGTCCCAGTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp CTGCATGCTGTGTATTTATTACCTTCAAAGTGTGGCTTTCATATTACTGTGCACCACATTGCTAGCATGTaGAGGGCTGTGCGACCTGGA +
Preference number: 4 (lower is better)
Translates to: LHAVYLLPSKCGFHITVHHIASM*RAVRPG
Trigger: TCCAGGTCGCACAGCCCTGCACATGCTAGCAATGTG...GTGCACAGTAATATGAAAGCCACACTTTGAAGGTAATAAATACACAGCATGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp CTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACAAAATTGAGGATTTCATaGTACTTAACGGACTTGAGA +
Preference number: 4 (lower is better)
Translates to: LVSPNPRKNSFPGSKPLTKLRIS*YLTDLR
Trigger: TCTCAAGTCCGTTAAGTAGCATGAAATCCTCAATTT...TGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAAATTGAGGATTTCATaGTACTTAACGGACTTGAGA +
Preference number: 4 (lower is better)
Translates to: WRWGILQTALVSPNPRKNKLRIS*YLTDLR
Trigger: TCTCAAGTCCGTTAAGTAGCATGAAATCCTCAATTT...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp CTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGCTTGGTTGATTCTTaGTTTATTGGTACTGAGAAT +
Preference number: 4 (lower is better)
Translates to: LVSPNPRKNSFPGSKPLTCLVDS*FIGTEN
Trigger: ATTCTCAGTACCAATAAAGCAAGAATCAACCAAGCA...TGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTCCTGGAAGTACCTTTaGCCACTTCACGACTTGGAT +
Preference number: 4 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNSWKYL*PLHDLD
Trigger: ATCCAAGTCGTGAAGTGGGCAAAGGTACTTCCAGGA...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp TCAGAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCGATCTCCACCAGCATTaGGGGGAACTCTACCTTCAG +
Preference number: 4 (lower is better)
Translates to: SELLTRYGFSSRGTGTCFDLHQH*GELYLQ
Trigger: CTGAAGGTAGAGTTCCCCGCAATGCTGGTGGAGATC...GAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAGTCAATAACTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp TTTCCCTTTCTTAAATACACTGTAAACGGTTCATTATGCATGCAGGACATTGCACTGGAGTCCCACAAATaGCCCAAGCGGGAGACCAAG +
Preference number: 4 (lower is better)
Translates to: FPFLKYTVNGSLCMQDIALESHK*PKRETK
Trigger: CTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAG...TGCAATGTCCTGCATGCATAATGAACCGTTTACAGTGTATTTAAGAAAGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp TTTGGACTGGGACAGGCATTCAACAGTGAATTTAGAATATGGCTTTGCTGTTTATCCTGCCATGATCTGTaGGTTCCTGTGACCGGTTCC +
Preference number: 4 (lower is better)
Translates to: FGLGQAFNSEFRIWLCCLSCHDL*VPVTGS
Trigger: GGAACCGGTCACAGGAACGCACAGATCATGGCAGGA...TAAACAGCAAAGCCATATTCTAAATTCACTGTTGAATGCCTGTCCCAGTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTACTCCTCCCTCTGAGTaGAGCTTTCACAGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVTPPSE*SFHRFP
Trigger: GGGAAACCTGTGAAAGCTGCACTCAGAGGGAGGAGT...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp CTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGCTGATAAATCTTAGCTaGACTCATGCTTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: LDMAFHPEEQEHVSKRWGLINLS*THASLL
Trigger: CAACAAGGAAGCATGAGTCCAGCTAAGATTTATCAG...CCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTGAAAACTGCCAAAGCTaGCTGTGGTGGAGGACACAG +
Preference number: 4 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVENCQS*LWWRTQ
Trigger: CTGTGTCCTCCACCACAGCCAGCTTTGGCAGTTTTC...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TCAGAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCGAAAACTGCCAAAGCTaGCTGTGGTGGAGGACACAG +
Preference number: 4 (lower is better)
Translates to: SELLTRYGFSSRGTGTCFENCQS*LWWRTQ
Trigger: CTGTGTCCTCCACCACAGCCAGCTTTGGCAGTTTTC...GAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAGTCAATAACTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp AAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTGTCAGAGGAGTTCCCTaGGTGATTGGGCTGTGCACT +
Preference number: 4 (lower is better)
Translates to: KGFKTTEEVSVWLFTTETVRGVP*VIGLCT
Trigger: AGTGCACAGCCCAATCACCCAGGGAACTCCTCTGAC...AGTCTCTGTTGTAAATAACCACACTGAAACCTCTTCGGTTGTCTTGAAACCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TCAGAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCCAGGGCTGTGCGACCTaGAGCCTCGATTTTCAACAT +
Preference number: 4 (lower is better)
Translates to: SELLTRYGFSSRGTGTCFQGCAT*SLDFQH
Trigger: ATGTTGAAAATCGAGGCTCCAGGTCGCACAGCCCTG...GAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAGTCAATAACTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TTTGGACTGGGACAGGCATTCAACAGTGAATTTAGAATATGGCTTTGCTGTTTACATCCCGCAATGTACTaGATCCAGCAGAGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: FGLGQAFNSEFRIWLCCLHPAMY*IQQRCQ
Trigger: CTGGCACCTCTGCTGGATCCAGTACATTGCGGGATG...TAAACAGCAAAGCCATATTCTAAATTCACTGTTGAATGCCTGTCCCAGTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp CTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGAGCTCCATCTGGTTCTaGTTTTATGTACTGGACAAT +
Preference number: 4 (lower is better)
Translates to: LDMAFHPEEQEHVSKRWGSSIWF*FYVLDN
Trigger: ATTGTCCAGTACATAAAACCAGAACCAGATGGAGCT...CCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp ACAACACAGGGAAACTTAAGGCAAAGTTCTTCTGGGCAGCGGGCAGTCACTTCCAAACGGGTTTACTGTTaGATTCCCTTTAAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: TTQGNLRQSSSGQRAVTSKRVYC*IPFKRG
Trigger: ACCTCTTTTAAAGGGAATCCAACAGTAAACCCGTTT...GGAAGTGACTGCCCGCTGCCCAGAAGAACTTTGCCTTAAGTTTCCCTGTGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342437.8
CDS-3UTR CCA 90 bp AAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTCAGAGGAAGGGATGCTaGCCTCTGGGTAATAGCTCC +
Preference number: 4 (lower is better)
Translates to: KGFKTTEEVSVWLFTTETQRKGC*PLGNSS
Trigger: GGAGCTATTACCCAGAGGCCAGCATCCCTTCCTCTG...AGTCTCTGTTGTAAATAACCACACTGAAACCTCTTCGGTTGTCTTGAAACCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAAGGAACTCAGGTGTTaGAAAGATTGGTCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: STEKQLSRLQTSDMTLNLKELRC*KDWSLA
Trigger: GGCTAGAGACCAATCTTTCCAACACCTGAGTTCCTT...CAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp ACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAACAAAAACACATCCAAGAATACTaGATTAGGGTAATTTGGTCC +
Preference number: 4 (lower is better)
Translates to: TCWSPTNAPSGRPRTKQKHIQEY*IRVIWS
Trigger: GGACCAAATTACCCTAATCCAGTATTCTTGGATGTG...TTTTTGTTTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTTCACCAGGTCATGCATaGAGTCCAGCAGCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVSPGHA*SPAAWS
Trigger: TGACCAAGCTGCTGGACTCCATGCATGACCTGGTGA...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TTTCCCTTTCTTAAATACACTGTAAACGGTTCATTATGCATGCAGGACATTGCATCCACCTTGGGCAGCTaGTCGCTGATGATCTCCACC +
Preference number: 4 (lower is better)
Translates to: FPFLKYTVNGSLCMQDIASTLGS*SLMIST
Trigger: GGTGGAGATCATCAGCGACCAGCTGCCCAAGGTGGA...TGCAATGTCCTGCATGCATAATGAACCGTTTACAGTGTATTTAAGAAAGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TCAGAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCAGCCAGAAAACGTGCTaGAGTCCCACAAATGCCCCA +
Preference number: 4 (lower is better)
Translates to: SELLTRYGFSSRGTGTCFSQKTC*SPTNAP
Trigger: TGGGGCATTTGTGGGACTCCAGCACGTTTTCTGGCT...GAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAGTCAATAACTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CTAAAACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGCATATGTTTGTGATTTaGGGCAAGAGAAAAGCCATA +
Preference number: 4 (lower is better)
Translates to: LKPLYLPVSMPFRLNLAKHMFVI*GKRKAI
Trigger: TATGGCTTTTCTCTTGCCCCAAATCACAAACATATG...CTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGTTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp TTTCCCTTTCTTAAATACACTGTAAACGGTTCATTATGCATGCAGGACATTGCAGCTTCCTCGTGGCCATaGGCTTCTCCAGCTACAGCT +
Preference number: 4 (lower is better)
Translates to: FPFLKYTVNGSLCMQDIAASSWP*ASPATA
Trigger: AGCTGTAGCTGGAGAAGCCCATGGCCACGAGGAAGC...TGCAATGTCCTGCATGCATAATGAACCGTTTACAGTGTATTTAAGAAAGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp TTTGGACTGGGACAGGCATTCAACAGTGAATTTAGAATATGGCTTTGCTGTTTAATTGCTGCTTCCTCGTaGCCATGGGCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: FGLGQAFNSEFRIWLCCLIAASS*PWASPA
Trigger: AGCTGGAGAAGCCCATGGCCACGAGGAAGCAGCAAT...TAAACAGCAAAGCCATATTCTAAATTCACTGTTGAATGCCTGTCCCAGTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGATTACCTTCAAAGTGTaGCTTTCATATTACTGTGCA +
Preference number: 4 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGITFKV*LSYYCA
Trigger: TGCACAGTAATATGAAAGCCACACTTTGAAGGTAAT...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp TCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGCAGACAGACAATTTaGACTGGGACAGGCATTCAA +
Preference number: 4 (lower is better)
Translates to: STEKQLSRLQTSDMTLNLSRQTI*TGTGIQ
Trigger: TTGAATGCCTGTCCCAGTCCAAATTGTCTGTCTGCT...CAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp TTTCCCTTTCTTAAATACACTGTAAACGGTTCATTATGCATGCAGGACATTGCAGACTGTGGTAGCCTTTaGTCTCCATCGCTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: FPFLKYTVNGSLCMQDIADCGSL*SPSLPR
Trigger: CCGAGGCAGCGATGGAGACCAAAGGCTACCACAGTC...TGCAATGTCCTGCATGCATAATGAACCGTTTACAGTGTATTTAAGAAAGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp CTGCATGCTGTGTATTTATTACCTTCAAAGTGTGGCTTTCATATTACTGTGCACAAGTCCAATATTGGCTaGTCGGCGGTGAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: LHAVYLLPSKCGFHITVHKSNIG*SAVRME
Trigger: CTCCATCCTCACCGCCGATCAGCCAATATTGGACTT...GTGCACAGTAATATGAAAGCCACACTTTGAAGGTAATAAATACACAGCATGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344721.8
CDS-3UTR TCA 90 bp CTGCATGCTGTGTATTTATTACCTTCAAAGTGTGGCTTTCATATTACTGTGCACTGGAGGACACAGAGTTaGTTCCAGCAGGGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: LHAVYLLPSKCGFHITVHWRTQS*FQQGCK
Trigger: TTTGCAGCCCTGCTGGAATCAACTCTGTGTCCTCCA...GTGCACAGTAATATGAAAGCCACACTTTGAAGGTAATAAATACACAGCATGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTGCCAGTCACACCATTTaGGATGGCACTCTCTACTTC +
Preference number: 4 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVASHTI*DGTLYF
Trigger: GAAGTAGAGAGTGCCATCTCAAATGGTGTGACTGGC...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp TCAGAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCGAAGGACTGTCCACCTaGATTCACCCCAACAATAGC +
Preference number: 4 (lower is better)
Translates to: SELLTRYGFSSRGTGTCFEGLST*IHPNNS
Trigger: GCTATTGTTGGGGTGAATTCAGGTGGACAGTCCTTC...GAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAGTCAATAACTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp AGAATATTAATGCCCCATATTGACTATACGTTTTATGTGCAAACCAAGGGTAAGAGGTGTGAGCGCTCGTaGGATTGTGGAGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RILMPHIDYTFYVQTKGKRCERS*DCGELR
Trigger: CCTCAGCTCTCCACAATCTCACGAGCGCTCACACCT...CTTACCCTTGGTTTGCACATAAAACGTATAGTCAATATGGGGCATTAATATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp AAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTTGCCTGCTAAGCGGTTaGGCGTGGAGAGCAGATTTT +
Preference number: 4 (lower is better)
Translates to: KGFKTTEEVSVWLFTTETCLLSG*AWRADF
Trigger: AAAATCTGCTCTCCACGCTCAACCGCTTAGCAGGCA...AGTCTCTGTTGTAAATAACCACACTGAAACCTCTTCGGTTGTCTTGAAACCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTTGCAGTCGAACGAACTaGAGGCTGATTTGGTGCATC +
Preference number: 4 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVCSRTN*RLIWCI
Trigger: GATGCACCAAATCAGCCTTCAGTTCGTTCGACTGCA...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp TCAGAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTGCAGTCGAACGAACTaGAGGCTGATTTGGTGCATC +
Preference number: 4 (lower is better)
Translates to: SELLTRYGFSSRGTGTCFCSRTN*RLIWCI
Trigger: GATGCACCAAATCAGCCTTCAGTTCGTTCGACTGCA...GAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAGTCAATAACTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp CTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGAACTTGAGAAACTGTTaGACAAGTGTGAATCAACCA +
Preference number: 4 (lower is better)
Translates to: LDMAFHPEEQEHVSKRWGNLRNC*TSVNQP
Trigger: TGGTTGATTCACACTTGTTCAACAGTTTCTCAAGTT...CCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTCATACATGGCAGACTaGTGCATCTTCTCTCTCCTA +
Preference number: 4 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNSYMAD*CIFSLL
Trigger: TAGGAGAGAGAAGATGCATCAGTCTGCCATGTATGA...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342437.8
CDS-3UTR GCA 90 bp AGAATATTAATGCCCCATATTGACTATACGTTTTATGTGCAAACCAAGGGTAAGTCCCACAGTACTGGCTaGCGGACTGGAAAGCGTGGA +
Preference number: 4 (lower is better)
Translates to: RILMPHIDYTFYVQTKGKSHSTG*RTGKRG
Trigger: TCCACGCTTTCCAGTCCGGCAGCCAGTACTGTGGGA...CTTACCCTTGGTTTGCACATAAAACGTATAGTCAATATGGGGCATTAATATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCTGCTTGGTTGATTCTTaGTTTATTGGTACTGAGAAT +
Preference number: 4 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSCLVDS*FIGTEN
Trigger: ATTCTCAGTACCAATAAAGCAAGAATCAACCAAGCA...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp TCAGAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCCCACTGGGAATCCGCTaGCTTCACAGTTACCATCAA +
Preference number: 4 (lower is better)
Translates to: SELLTRYGFSSRGTGTCFPLGIR*LHSYHQ
Trigger: TTGATGGTAACTGTGAAGGCAGCGGATTCCCAGTGG...GAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAGTCAATAACTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp TTTGGACTGGGACAGGCATTCAACAGTGAATTTAGAATATGGCTTTGCTGTTTAGATCTCCACCAGCATTaGGGGGAACTCTACCTTCAG +
Preference number: 4 (lower is better)
Translates to: FGLGQAFNSEFRIWLCCLDLHQH*GELYLQ
Trigger: CTGAAGGTAGAGTTCCCCGCAATGCTGGTGGAGATC...TAAACAGCAAAGCCATATTCTAAATTCACTGTTGAATGCCTGTCCCAGTCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTGACCGGTTCCAGGAGTaGAGAACCTCTTTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVDRFQE*RTSFQD
Trigger: ATCTTGGAAAGAGGTTCTGCACTCCTGGAACCGGTC...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp CTAAAACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGGGATTTATTGTAATCTaGTTACAGTCCTTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LKPLYLPVSMPFRLNLAKGFIVI*LQSFAK
Trigger: CTTTGCAAAGGACTGTAAGCAGATTACAATAAATCC...CTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGTTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp AAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTCAGGGCTGTGCGACCTaGAGCCTCGATTTTCAACAT +
Preference number: 4 (lower is better)
Translates to: KGFKTTEEVSVWLFTTETQGCAT*SLDFQH
Trigger: ATGTTGAAAATCGAGGCTCCAGGTCGCACAGCCCTG...AGTCTCTGTTGTAAATAACCACACTGAAACCTCTTCGGTTGTCTTGAAACCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTTACTGGCTGCCGGACTaGAAAGCGTGGATCTGTTAT +
Preference number: 4 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVYWLPD*KAWICY
Trigger: ATAACAGATCCACGCTTTCCAGTCCGGCAGCCAGTA...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGAAACGGGTTTACTGTTaGATTCCCTTTAAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: LDMAFHPEEQEHVSKRWGKRVYC*IPFKRG
Trigger: ACCTCTTTTAAAGGGAATCCAACAGTAAACCCGTTT...CCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp ACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGATTGTTTAATACCCACTaGGAATCCGCTGCCTTCACA +
Preference number: 4 (lower is better)
Translates to: TEKQLSRLQTSDMTLNLRLFNTH*ESAAFT
Trigger: TGTGAAGGCAGCGGATTCCCAGTGGGTATTAAACAA...TCTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp ACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGAAGGTGTTGGAAAGATTaGTCTCTAGCCGATCGTGAT +
Preference number: 4 (lower is better)
Translates to: TEKQLSRLQTSDMTLNLRRCWKD*SLADRD
Trigger: ATCACGATCGGCTAGAGACCAATCTTTCCAACACCT...TCTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTCTTCAAATGCAGCCTaGCTTTTGAGGCCATCCTTT +
Preference number: 4 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNSSNAA*LLRPSF
Trigger: AAAGGATGGCCTCAAAAGCCAGGCTGCATTTGAAGA...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TTTGGACTGGGACAGGCATTCAACAGTGAATTTAGAATATGGCTTTGCTGTTTAAAGGCAAAGTTCTTCTaGGCAGCGGGCAGTCACTTC +
Preference number: 4 (lower is better)
Translates to: FGLGQAFNSEFRIWLCCLKAKFF*AAGSHF
Trigger: GAAGTGACTGCCCGCTGCCCAGAAGAACTTTGCCTT...TAAACAGCAAAGCCATATTCTAAATTCACTGTTGAATGCCTGTCCCAGTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp TCAGAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTTTCTTGGGTCCTTCTaGGTGTGGAACAACACAGGG +
Preference number: 4 (lower is better)
Translates to: SELLTRYGFSSRGTGTCFFLGSF*VWNNTG
Trigger: CCCTGTGTTGTTCCACACCCAGAAGGACCCAAGAAA...GAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAGTCAATAACTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTTTTCTTGGGTCCTTCTaGGTGTGGAACAACACAGGG +
Preference number: 4 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVFLGSF*VWNNTG
Trigger: CCCTGTGTTGTTCCACACCCAGAAGGACCCAAGAAA...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp ACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGAAGCAGACAGACAATTTaGACTGGGACAGGCATTCAA +
Preference number: 4 (lower is better)
Translates to: TEKQLSRLQTSDMTLNLRSRQTI*TGTGIQ
Trigger: TTGAATGCCTGTCCCAGTCCAAATTGTCTGTCTGCT...TCTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp TTTCCCTTTCTTAAATACACTGTAAACGGTTCATTATGCATGCAGGACATTGCATGGAGGACACAGAGTTaGTTCCAGCAGGGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: FPFLKYTVNGSLCMQDIAWRTQS*FQQGCK
Trigger: TTTGCAGCCCTGCTGGAATCAACTCTGTGTCCTCCA...TGCAATGTCCTGCATGCATAATGAACCGTTTACAGTGTATTTAAGAAAGGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp TCAGAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCCAGAGGATCTCAGAGTaGCATTATTGGGACTGGAGA +
Preference number: 4 (lower is better)
Translates to: SELLTRYGFSSRGTGTCFQRISE*HYWDWR
Trigger: TCTCCAGTCCCAATAATGTCACTCTGAGATCCTCTG...GAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAGTCAATAACTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp AGAATATTAATGCCCCATATTGACTATACGTTTTATGTGCAAACCAAGGGTAAGGGAAAAGGGACCTCTTaGGCACCTTTCTCCTGCGTG +
Preference number: 4 (lower is better)
Translates to: RILMPHIDYTFYVQTKGKGKGTS*APFSCV
Trigger: CACGCAGGAGAAAGGTGCTCAAGAGGTCCCTTTTCC...CTTACCCTTGGTTTGCACATAAAACGTATAGTCAATATGGGGCATTAATATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp AAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTTGCAGTCGAACGAACTaGAGGCTGATTTGGTGCATC +
Preference number: 4 (lower is better)
Translates to: KGFKTTEEVSVWLFTTETCSRTN*RLIWCI
Trigger: GATGCACCAAATCAGCCTTCAGTTCGTTCGACTGCA...AGTCTCTGTTGTAAATAACCACACTGAAACCTCTTCGGTTGTCTTGAAACCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp CTGCATGCTGTGTATTTATTACCTTCAAAGTGTGGCTTTCATATTACTGTGCACTGCAGTCGAACGAACTaGAGGCTGATTTGGTGCATC +
Preference number: 4 (lower is better)
Translates to: LHAVYLLPSKCGFHITVHCSRTN*RLIWCI
Trigger: GATGCACCAAATCAGCCTTCAGTTCGTTCGACTGCA...GTGCACAGTAATATGAAAGCCACACTTTGAAGGTAATAAATACACAGCATGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTCCGGCTCCAAACCTCTaGCATGACTTTAAACTTGAG +
Preference number: 4 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVPAPNL*HDFKLE
Trigger: CTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGG...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp CTGCATGCTGTGTATTTATTACCTTCAAAGTGTGGCTTTCATATTACTGTGCACGGAAAAGATGCTCTCTaGGCCATCAAGTTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: LHAVYLLPSKCGFHITVHGKDAL*AIKFPV
Trigger: GACTGGGAACTTGATGGCTCAGAGAGCATCTTTTCC...GTGCACAGTAATATGAAAGCCACACTTTGAAGGTAATAAATACACAGCATGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTCAGAAGGGAATAGCTaGTCTTTAACAGAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNSEGNS*SLTERE
Trigger: CTCTCTCTCTGTTAAAGATCAGCTATTCCCTTCTGA...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp TCAGAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCATGTTGCCTGCATGGTaGACCCTGGAGAAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: SELLTRYGFSSRGTGTCFMLPAW*TLEKSV
Trigger: AACACTTTTCTCCAGGGTTCACCATGCAGGCAACAT...GAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAGTCAATAACTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACGTTAATACAAAAAGCTaGTGCAGACCATCTCCATCC +
Preference number: 4 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNVNTKS*CRPSPS
Trigger: GGATGGAGATGGTCTGCATCAGCTTTTTGTATTAAC...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp ACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGAATAGTTGTGTTGCCATaGACATTTACCTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: TEKQLSRLQTSDMTLNLRIVVLP*TFTFHC
Trigger: GCAGTGGAAGGTAAATGTTCATGGCAACACAACTAT...TCTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625323.2
CDS-3UTR GCA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTTCATGTTCAGAGGGCTaGAAACAGACGGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVSCSEG*KQTGFS
Trigger: AGAAAAGCCCGTCTGTTTGCAGCCCTCTGAACATGA...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp AAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTTGGGTGATTGGGCTGTaGACTGGAAAACTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: KGFKTTEEVSVWLFTTETWVIGL*TGKLPK
Trigger: CTTTGGCAGTTTTCCAGTGCACAGCCCAATCACCCA...AGTCTCTGTTGTAAATAACCACACTGAAACCTCTTCGGTTGTCTTGAAACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp AGAATATTAATGCCCCATATTGACTATACGTTTTATGTGCAAACCAAGGGTAAGCACATTGCTAGCATGTaGAGGGCTGTGCGACCTGGA +
Preference number: 4 (lower is better)
Translates to: RILMPHIDYTFYVQTKGKHIASM*RAVRPG
Trigger: TCCAGGTCGCACAGCCCTGCACATGCTAGCAATGTG...CTTACCCTTGGTTTGCACATAAAACGTATAGTCAATATGGGGCATTAATATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp AAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTCTGGAGATTTTACACTaGAGTGACTTGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KGFKTTEEVSVWLFTTETLEILH*SDLEGW
Trigger: CCAGCCCTCCAAGTCACTGCAGTGTAAAATCTCCAG...AGTCTCTGTTGTAAATAACCACACTGAAACCTCTTCGGTTGTCTTGAAACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp AACCTCTGCCAGCTCTGCCCAGAATTGTTGGGACACTTAGTTACCATCTTCCTCTGCTTGGTTGATTCTTaGTTTATTGGTACTGAGAAT +
Preference number: 4 (lower is better)
Translates to: NLCQLCPELLGHLVTIFLCLVDS*FIGTEN
Trigger: ATTCTCAGTACCAATAAAGCAAGAATCAACCAAGCA...GAGGAAGATGGTAACTAAGTGTCCCAACAATTCTGGGCAGAGCTGGCAGAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342437.8
CDS-3UTR GCA 90 bp AAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTGACCGAGGGTTCTTTTaGAGGAGCGATGTACGTTGT +
Preference number: 4 (lower is better)
Translates to: KGFKTTEEVSVWLFTTETDRGFF*RSDVRC
Trigger: ACAACGTACATCGCTCCTGCAAAAGAACCCTCGGTC...AGTCTCTGTTGTAAATAACCACACTGAAACCTCTTCGGTTGTCTTGAAACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTCCTCATTTCTTCAAATaGAGCCTGGCTTTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVPHFFK*SLAFEA
Trigger: GGCCTCAAAAGCCAGGCTGCATTTGAAGAAATGAGG...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGCTCCATCTGGTTCTaGTTTTATGTACTGGACAAT +
Preference number: 4 (lower is better)
Translates to: STEKQLSRLQTSDMTLNLSSIWF*FYVLDN
Trigger: ATTGTCCAGTACATAAAACCAGAACCAGATGGAGCT...CAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp AAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTTTTCTTGGGTCCTTCTaGGTGTGGAACAACACAGGG +
Preference number: 4 (lower is better)
Translates to: KGFKTTEEVSVWLFTTETFLGSF*VWNNTG
Trigger: CCCTGTGTTGTTCCACACCCAGAAGGACCCAAGAAA...AGTCTCTGTTGTAAATAACCACACTGAAACCTCTTCGGTTGTCTTGAAACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTGACGGGCTTTTCTCATaGCACATGATAGGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVDGLFS*HMIGLL
Trigger: TAAAAGCCCTATCATGTGTCATGAGAAAAGCCCGTC...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp AGAATATTAATGCCCCATATTGACTATACGTTTTATGTGCAAACCAAGGGTAAGGAACCAGTGCTGTGTTaGCCGAGGGTTCTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: RILMPHIDYTFYVQTKGKEPVLC*PRVLLQ
Trigger: CTGCAAAAGAACCCTCGGTCAACACAGCACTGGTTC...CTTACCCTTGGTTTGCACATAAAACGTATAGTCAATATGGGGCATTAATATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp AAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTCCGGCTCCAAACCTCTaGCATGACTTTAAACTTGAG +
Preference number: 4 (lower is better)
Translates to: KGFKTTEEVSVWLFTTETPAPNL*HDFKLE
Trigger: CTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGG...AGTCTCTGTTGTAAATAACCACACTGAAACCTCTTCGGTTGTCTTGAAACCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp AAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTACATGTGTTGTCAAATaGCACCTTCCAGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: KGFKTTEEVSVWLFTTETTCVVK*HLPGAA
Trigger: TGCAGCTCCTGGAAGGTGTCATTTGACAACACATGT...AGTCTCTGTTGTAAATAACCACACTGAAACCTCTTCGGTTGTCTTGAAACCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACGTGCCTGAACATGAATaGTTGGTTGATTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNVPEHE*LVDSCF
Trigger: AAAGCAAGAATCAACCAAGCATTCATGTTCAGGCAC...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp TTTGGACTGGGACAGGCATTCAACAGTGAATTTAGAATATGGCTTTGCTGTTTACCTCATTTCTTCAAATaGAGCCTGGCTTTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: FGLGQAFNSEFRIWLCCLPHFFK*SLAFEA
Trigger: GGCCTCAAAAGCCAGGCTGCATTTGAAGAAATGAGG...TAAACAGCAAAGCCATATTCTAAATTCACTGTTGAATGCCTGTCCCAGTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACAACTCCCAGTCTGCATaGTGTGTATTTATTACCTTC +
Preference number: 4 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNNSQSA*CVFITF
Trigger: GAAGGTAATAAATACACAGCATGCAGACTGGGAGTT...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp TCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGCTGCTTACAGTCCTTTaGAAAGACAGACATATGTTT +
Preference number: 4 (lower is better)
Translates to: STEKQLSRLQTSDMTLNLLLTVL*KDRHMF
Trigger: AAACATATGTCTGTCTTTGCAAAGGACTGTAAGCAG...CAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGTACTGTTGTTTaGAATAGCACCGGAAACACA +
Preference number: 4 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNLSTVV*NSTGNT
Trigger: TGTGTTTCCGGTGCTATTCCAAACAACAGTACTCAA...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTTCACACAACTTAGAGTaGAAGGACGATGGCCATTTC +
Preference number: 4 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVSHNLE*KDDGHF
Trigger: GAAATGGCCATCGTCCTTCCACTCTAAGTTGTGTGA...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TTTCCCTTTCTTAAATACACTGTAAACGGTTCATTATGCATGCAGGACATTGCAAGTTCCCTGGGTGATTaGGCTGTGCACTGGAAAACT +
Preference number: 4 (lower is better)
Translates to: FPFLKYTVNGSLCMQDIASSLGD*AVHWKT
Trigger: AGTTTTCCAGTGCACAGCCCAATCACCCAGGGAACT...TGCAATGTCCTGCATGCATAATGAACCGTTTACAGTGTATTTAAGAAAGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTTTGTTTAATACCCACTaGGAATCCGCTGCCTTCACA +
Preference number: 4 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVLFNTH*ESAAFT
Trigger: TGTGAAGGCAGCGGATTCCCAGTGGGTATTAAACAA...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACATAGCTCCCATCATCTaGTTCTTGTTTAATACCCAC +
Preference number: 4 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNIAPII*FLFNTH
Trigger: GTGGGTATTAAACAAGAACCAGATGATGGGAGCTAT...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp AGAATATTAATGCCCCATATTGACTATACGTTTTATGTGCAAACCAAGGGTAAGAGGGATGCTGGCCTCTaGGTAATAGCTCCCATCATC +
Preference number: 4 (lower is better)
Translates to: RILMPHIDYTFYVQTKGKRDAGL*VIAPII
Trigger: GATGATGGGAGCTATTACCCAGAGGCCAGCATCCCT...CTTACCCTTGGTTTGCACATAAAACGTATAGTCAATATGGGGCATTAATATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTAGGTGTTGGAAAGATTaGTCTCTAGCCGATCGTGAT +
Preference number: 4 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVRCWKD*SLADRD
Trigger: ATCACGATCGGCTAGAGACCAATCTTTCCAACACCT...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACCACATCCAAGAATACTaGATTAGGGTAATTTGGTCC +
Preference number: 4 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNHIQEY*IRVIWS
Trigger: GGACCAAATTACCCTAATCCAGTATTCTTGGATGTG...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp ACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGACACATCCAAGAATACTaGATTAGGGTAATTTGGTCC +
Preference number: 4 (lower is better)
Translates to: TEKQLSRLQTSDMTLNLRHIQEY*IRVIWS
Trigger: GGACCAAATTACCCTAATCCAGTATTCTTGGATGTG...TCTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTTCTTCAAATGCAGCCTaGCTTTTGAGGCCATCCTTT +
Preference number: 4 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVSSNAA*LLRPSF
Trigger: AAAGGATGGCCTCAAAAGCCAGGCTGCATTTGAAGA...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TTTCCCTTTCTTAAATACACTGTAAACGGTTCATTATGCATGCAGGACATTGCATGGAGTCCAGCAGCTTaGTCAGTTGGTAGAACCTCT +
Preference number: 4 (lower is better)
Translates to: FPFLKYTVNGSLCMQDIAWSPAA*SVGRTS
Trigger: AGAGGTTCTACCAACTGACCAAGCTGCTGGACTCCA...TGCAATGTCCTGCATGCATAATGAACCGTTTACAGTGTATTTAAGAAAGGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp AGAATATTAATGCCCCATATTGACTATACGTTTTATGTGCAAACCAAGGGTAAGTCACCAGGTCATGCATaGAGTCCAGCAGCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: RILMPHIDYTFYVQTKGKSPGHA*SPAAWS
Trigger: TGACCAAGCTGCTGGACTCCATGCATGACCTGGTGA...CTTACCCTTGGTTTGCACATAAAACGTATAGTCAATATGGGGCATTAATATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp AGAATATTAATGCCCCATATTGACTATACGTTTTATGTGCAAACCAAGGGTAAGAAGGCAAAGTTCTTCTaGGCAGCGGGCAGTCACTTC +
Preference number: 4 (lower is better)
Translates to: RILMPHIDYTFYVQTKGKKAKFF*AAGSHF
Trigger: GAAGTGACTGCCCGCTGCCCAGAAGAACTTTGCCTT...CTTACCCTTGGTTTGCACATAAAACGTATAGTCAATATGGGGCATTAATATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp TTTGGACTGGGACAGGCATTCAACAGTGAATTTAGAATATGGCTTTGCTGTTTAGACGGGCTTTTCTCATaGCACATGATAGGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: FGLGQAFNSEFRIWLCCLDGLFS*HMIGLL
Trigger: TAAAAGCCCTATCATGTGTCATGAGAAAAGCCCGTC...TAAACAGCAAAGCCATATTCTAAATTCACTGTTGAATGCCTGTCCCAGTCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp CTGCATGCTGTGTATTTATTACCTTCAAAGTGTGGCTTTCATATTACTGTGCACTGTATTCTTCAAAGGTaGGCTGCAGTCGAACGAACT +
Preference number: 4 (lower is better)
Translates to: LHAVYLLPSKCGFHITVHCILQR*AAVERT
Trigger: AGTTCGTTCGACTGCAGCTCACCTTTGAAGAATACA...GTGCACAGTAATATGAAAGCCACACTTTGAAGGTAATAAATACACAGCATGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTACGTTCGTTAGTCCTTaGACCCTTTTAAAACAAGCG +
Preference number: 4 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVTFVSP*TLLKQA
Trigger: CGCTTGTTTTAAAAGGGTTCAAGGACTAACGAACGT...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp TCAGAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCACGTTCGTTAGTCCTTaGACCCTTTTAAAACAAGCG +
Preference number: 4 (lower is better)
Translates to: SELLTRYGFSSRGTGTCFTFVSP*TLLKQA
Trigger: CGCTTGTTTTAAAAGGGTTCAAGGACTAACGAACGT...GAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAGTCAATAACTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTTCAGAAGGGAATAGCTaGTCTTTAACAGAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVSEGNS*SLTERE
Trigger: CTCTCTCTCTGTTAAAGATCAGCTATTCCCTTCTGA...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp TTTCCCTTTCTTAAATACACTGTAAACGGTTCATTATGCATGCAGGACATTGCAATGTTGCCTGCATGGTaGACCCTGGAGAAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: FPFLKYTVNGSLCMQDIAMLPAW*TLEKSV
Trigger: AACACTTTTCTCCAGGGTTCACCATGCAGGCAACAT...TGCAATGTCCTGCATGCATAATGAACCGTTTACAGTGTATTTAAGAAAGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp ACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGACATCCTTTGGAATTGTaGTTAGTAGCAGCAAAACTT +
Preference number: 4 (lower is better)
Translates to: TEKQLSRLQTSDMTLNLRHPLEL*LVAAKL
Trigger: AAGTTTTGCTGCTACTAAGCACAATTCCAAAGGATG...TCTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp AGAATATTAATGCCCCATATTGACTATACGTTTTATGTGCAAACCAAGGGTAAGGACCGGTTCCAGGAGTaGAGAACCTCTTTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: RILMPHIDYTFYVQTKGKDRFQE*RTSFQD
Trigger: ATCTTGGAAAGAGGTTCTGCACTCCTGGAACCGGTC...CTTACCCTTGGTTTGCACATAAAACGTATAGTCAATATGGGGCATTAATATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp AAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTTCACAGGTTTCCCCTTaGATAAGGCAGGTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: KGFKTTEEVSVWLFTTETSQVSP*IRQVSF
Trigger: AAAAGACACCTGCCTTATGCAAGGGGAAACCTGTGA...AGTCTCTGTTGTAAATAACCACACTGAAACCTCTTCGGTTGTCTTGAAACCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACCTGCTTACAGTCCTTTaGAAAGACAGACATATGTTT +
Preference number: 4 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNLLTVL*KDRHMF
Trigger: AAACATATGTCTGTCTTTGCAAAGGACTGTAAGCAG...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp AAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTTCACACAACTTAGAGTaGAAGGACGATGGCCATTTC +
Preference number: 4 (lower is better)
Translates to: KGFKTTEEVSVWLFTTETSHNLE*KDDGHF
Trigger: GAAATGGCCATCGTCCTTCCACTCTAAGTTGTGTGA...AGTCTCTGTTGTAAATAACCACACTGAAACCTCTTCGGTTGTCTTGAAACCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp AAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTCGAGCCATCCATAAATaGAAACGGGTTTACTGTTGG +
Preference number: 4 (lower is better)
Translates to: KGFKTTEEVSVWLFTTETRAIHK*KRVYCW
Trigger: CCAACAGTAAACCCGTTTCCATTTATGGATGGCTCG...AGTCTCTGTTGTAAATAACCACACTGAAACCTCTTCGGTTGTCTTGAAACCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp AAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTAGGTGTTGGAAAGATTaGTCTCTAGCCGATCGTGAT +
Preference number: 4 (lower is better)
Translates to: KGFKTTEEVSVWLFTTETRCWKD*SLADRD
Trigger: ATCACGATCGGCTAGAGACCAATCTTTCCAACACCT...AGTCTCTGTTGTAAATAACCACACTGAAACCTCTTCGGTTGTCTTGAAACCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CTGCATGCTGTGTATTTATTACCTTCAAAGTGTGGCTTTCATATTACTGTGCACAGGTGTTGGAAAGATTaGTCTCTAGCCGATCGTGAT +
Preference number: 4 (lower is better)
Translates to: LHAVYLLPSKCGFHITVHRCWKD*SLADRD
Trigger: ATCACGATCGGCTAGAGACCAATCTTTCCAACACCT...GTGCACAGTAATATGAAAGCCACACTTTGAAGGTAATAAATACACAGCATGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp AGAATATTAATGCCCCATATTGACTATACGTTTTATGTGCAAACCAAGGGTAAGGGGTCCTTCTGGGTGTaGAACAACACAGGGAAACTT +
Preference number: 4 (lower is better)
Translates to: RILMPHIDYTFYVQTKGKGSFWV*NNTGKL
Trigger: AAGTTTCCCTGTGTTGTTCCACACCCAGAAGGACCC...CTTACCCTTGGTTTGCACATAAAACGTATAGTCAATATGGGGCATTAATATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TCAGAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCAAAAACAGGTTTTCTTaGGTCCTTCTGGGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: SELLTRYGFSSRGTGTCFKNRFS*VLLGVE
Trigger: TTCCACACCCAGAAGGACCCAAGAAAACCTGTTTTT...GAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAGTCAATAACTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTAAAAACAGGTTTTCTTaGGTCCTTCTGGGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVKNRFS*VLLGVE
Trigger: TTCCACACCCAGAAGGACCCAAGAAAACCTGTTTTT...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGATTACCTTCAAAGTGTaGCTTTCATATTACTGTGCA +
Preference number: 4 (lower is better)
Translates to: STEKQLSRLQTSDMTLNLITFKV*LSYYCA
Trigger: TGCACAGTAATATGAAAGCCACACTTTGAAGGTAAT...CAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp AGAATATTAATGCCCCATATTGACTATACGTTTTATGTGCAAACCAAGGGTAAGCAGAGGATCTCAGAGTaGCATTATTGGGACTGGAGA +
Preference number: 4 (lower is better)
Translates to: RILMPHIDYTFYVQTKGKQRISE*HYWDWR
Trigger: TCTCCAGTCCCAATAATGTCACTCTGAGATCCTCTG...CTTACCCTTGGTTTGCACATAAAACGTATAGTCAATATGGGGCATTAATATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp TTTCCCTTTCTTAAATACACTGTAAACGGTTCATTATGCATGCAGGACATTGCATGTATTCTTCAAAGGTaGGCTGCAGTCGAACGAACT +
Preference number: 4 (lower is better)
Translates to: FPFLKYTVNGSLCMQDIACILQR*AAVERT
Trigger: AGTTCGTTCGACTGCAGCTCACCTTTGAAGAATACA...TGCAATGTCCTGCATGCATAATGAACCGTTTACAGTGTATTTAAGAAAGGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp AGAATATTAATGCCCCATATTGACTATACGTTTTATGTGCAAACCAAGGGTAAGTCATGTTCAGAGGGCTaGAAACAGACGGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: RILMPHIDYTFYVQTKGKSCSEG*KQTGFS
Trigger: AGAAAAGCCCGTCTGTTTGCAGCCCTCTGAACATGA...CTTACCCTTGGTTTGCACATAAAACGTATAGTCAATATGGGGCATTAATATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp TCAGAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCGTAAACGGTTCATTATaGATGCAGGACATTGCACTT +
Preference number: 4 (lower is better)
Translates to: SELLTRYGFSSRGTGTCFVNGSL*MQDIAL
Trigger: AAGTGCAATGTCCTGCATGCATAATGAACCGTTTAC...GAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAGTCAATAACTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp AAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTGTTGATCTAATTAATTaGTGCTTCCTCGTGGCCATG +
Preference number: 4 (lower is better)
Translates to: KGFKTTEEVSVWLFTTETVDLIN*CFLVAM
Trigger: CATGGCCACGAGGAAGCAGCAATTAATTAGATCAAC...AGTCTCTGTTGTAAATAACCACACTGAAACCTCTTCGGTTGTCTTGAAACCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp TTTCCCTTTCTTAAATACACTGTAAACGGTTCATTATGCATGCAGGACATTGCATCACAGGTTTCCCCTTaGATAAGGCAGGTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: FPFLKYTVNGSLCMQDIASQVSP*IRQVSF
Trigger: AAAAGACACCTGCCTTATGCAAGGGGAAACCTGTGA...TGCAATGTCCTGCATGCATAATGAACCGTTTACAGTGTATTTAAGAAAGGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTTTGAGTACTGTTGTTTaGAATAGCACCGGAAACACA +
Preference number: 4 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVLSTVV*NSTGNT
Trigger: TGTGTTTCCGGTGCTATTCCAAACAACAGTACTCAA...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TTTCCCTTTCTTAAATACACTGTAAACGGTTCATTATGCATGCAGGACATTGCATCACACAACTTAGAGTaGAAGGACGATGGCCATTTC +
Preference number: 4 (lower is better)
Translates to: FPFLKYTVNGSLCMQDIASHNLE*KDDGHF
Trigger: GAAATGGCCATCGTCCTTCCACTCTAAGTTGTGTGA...TGCAATGTCCTGCATGCATAATGAACCGTTTACAGTGTATTTAAGAAAGGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp AAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTTGGACAATATTAAGCTaGCCAGTCACACCATTTGAG +
Preference number: 4 (lower is better)
Translates to: KGFKTTEEVSVWLFTTETWTILS*PVTPFE
Trigger: CTCAAATGGTGTGACTGGCCAGCTTAATATTGTCCA...AGTCTCTGTTGTAAATAACCACACTGAAACCTCTTCGGTTGTCTTGAAACCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TCAGAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTCTCCATCCCAAACCTaGTTAAGTAAGTCAGAATTC +
Preference number: 4 (lower is better)
Translates to: SELLTRYGFSSRGTGTCFSPSQT*LSKSEF
Trigger: GAATTCTGACTTACTTAACCAGGTTTGGGATGGAGA...GAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAGTCAATAACTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp TCAGAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCAAACACAGCTTACGTTaGCAATCTCCATGTAGTTAT +
Preference number: 4 (lower is better)
Translates to: SELLTRYGFSSRGTGTCFKHSLR*QSPCSY
Trigger: ATAACTACATGGAGATTGTCAACGTAAGCTGTGTTT...GAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAGTCAATAACTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp AGAATATTAATGCCCCATATTGACTATACGTTTTATGTGCAAACCAAGGGTAAGAGAGTCAGACATAAATaGTCTCAAGGGCGTGTTCAC +
Preference number: 4 (lower is better)
Translates to: RILMPHIDYTFYVQTKGKRVRHK*SQGRVH
Trigger: GTGAACACGCCCTTGAGATCATTTATGTCTGACTCT...CTTACCCTTGGTTTGCACATAAAACGTATAGTCAATATGGGGCATTAATATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp TCAGAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCAACTTGAGAAACTGTTaGACAAGTGTGAATCAACCA +
Preference number: 4 (lower is better)
Translates to: SELLTRYGFSSRGTGTCFNLRNC*TSVNQP
Trigger: TGGTTGATTCACACTTGTTCAACAGTTTCTCAAGTT...GAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAGTCAATAACTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp TTTCCCTTTCTTAAATACACTGTAAACGGTTCATTATGCATGCAGGACATTGCACTGTGCACCGTAAGTTaGCTGTATTTAAAGATCTGC +
Preference number: 4 (lower is better)
Translates to: FPFLKYTVNGSLCMQDIALCTVS*LYLKIC
Trigger: GCAGATCTTTAAATACAGTCAACTTACGGTGCACAG...TGCAATGTCCTGCATGCATAATGAACCGTTTACAGTGTATTTAAGAAAGGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp AAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTGTGCCTGAACATGAATaGTTGGTTGATTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: KGFKTTEEVSVWLFTTETVPEHE*LVDSCF
Trigger: AAAGCAAGAATCAACCAAGCATTCATGTTCAGGCAC...AGTCTCTGTTGTAAATAACCACACTGAAACCTCTTCGGTTGTCTTGAAACCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TTTGGACTGGGACAGGCATTCAACAGTGAATTTAGAATATGGCTTTGCTGTTTATTGAGTACTGTTGTTTaGAATAGCACCGGAAACACA +
Preference number: 4 (lower is better)
Translates to: FGLGQAFNSEFRIWLCCLLSTVV*NSTGNT
Trigger: TGTGTTTCCGGTGCTATTCCAAACAACAGTACTCAA...TAAACAGCAAAGCCATATTCTAAATTCACTGTTGAATGCCTGTCCCAGTCCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp AGAATATTAATGCCCCATATTGACTATACGTTTTATGTGCAAACCAAGGGTAAGATTGGGACTGGAGACTaGAGATTTTACACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: RILMPHIDYTFYVQTKGKIGTGD*RFYTAV
Trigger: CACTGCAGTGTAAAATCTCCAGTCTCCAGTCCCAAT...CTTACCCTTGGTTTGCACATAAAACGTATAGTCAATATGGGGCATTAATATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TTTGGACTGGGACAGGCATTCAACAGTGAATTTAGAATATGGCTTTGCTGTTTAGCTAAAAGCTCCATCTaGTTCTGGTTTTATGTACTG +
Preference number: 4 (lower is better)
Translates to: FGLGQAFNSEFRIWLCCLAKSSI*FWFYVL
Trigger: CAGTACATAAAACCAGAACCAGATGGAGCTTTTAGC...TAAACAGCAAAGCCATATTCTAAATTCACTGTTGAATGCCTGTCCCAGTCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTCAAGTTTTTAAATCCTaGAAGTACCTTTGCCCACTT +
Preference number: 4 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVQVFKS*KYLCPL
Trigger: AAGTGGGCAAAGGTACTTCCAGGATTTAAAAACTTG...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp TTTCCCTTTCTTAAATACACTGTAAACGGTTCATTATGCATGCAGGACATTGCAGGCATAGTTCATACATaGCAGACTGATGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: FPFLKYTVNGSLCMQDIAGIVHT*QTDASS
Trigger: AGAAGATGCATCAGTCTGCCATGTATGAACTATGCC...TGCAATGTCCTGCATGCATAATGAACCGTTTACAGTGTATTTAAGAAAGGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp AGAATATTAATGCCCCATATTGACTATACGTTTTATGTGCAAACCAAGGGTAAGATTTGGTGCATCCCCTaGCATAGTTCATACATGGCA +
Preference number: 4 (lower is better)
Translates to: RILMPHIDYTFYVQTKGKIWCIP*HSSYMA
Trigger: TGCCATGTATGAACTATGCCAGGGGATGCACCAAAT...CTTACCCTTGGTTTGCACATAAAACGTATAGTCAATATGGGGCATTAATATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TCAGAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCCATATGTTTGTGATTTaGGGCAAGAGAAAAGCCATA +
Preference number: 4 (lower is better)
Translates to: SELLTRYGFSSRGTGTCFHMFVI*GKRKAI
Trigger: TATGGCTTTTCTCTTGCCCCAAATCACAAACATATG...GAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAGTCAATAACTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR TCA 90 bp AAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTAACTTGAGAAACTGTTaGACAAGTGTGAATCAACCA +
Preference number: 4 (lower is better)
Translates to: KGFKTTEEVSVWLFTTETNLRNC*TSVNQP
Trigger: TGGTTGATTCACACTTGTTCAACAGTTTCTCAAGTT...AGTCTCTGTTGTAAATAACCACACTGAAACCTCTTCGGTTGTCTTGAAACCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR TCA 90 bp AGAATATTAATGCCCCATATTGACTATACGTTTTATGTGCAAACCAAGGGTAAGACGTTCGTTAGTCCTTaGACCCTTTTAAAACAAGCG +
Preference number: 4 (lower is better)
Translates to: RILMPHIDYTFYVQTKGKTFVSP*TLLKQA
Trigger: CGCTTGTTTTAAAAGGGTTCAAGGACTAACGAACGT...CTTACCCTTGGTTTGCACATAAAACGTATAGTCAATATGGGGCATTAATATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTAAATTGAGGATTTCATaGTACTTAACGGACTTGAGA +
Preference number: 4 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVKLRIS*YLTDLR
Trigger: TCTCAAGTCCGTTAAGTAGCATGAAATCCTCAATTT...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp TTTCCCTTTCTTAAATACACTGTAAACGGTTCATTATGCATGCAGGACATTGCAGTGCCTGAACATGAATaGTTGGTTGATTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: FPFLKYTVNGSLCMQDIAVPEHE*LVDSCF
Trigger: AAAGCAAGAATCAACCAAGCATTCATGTTCAGGCAC...TGCAATGTCCTGCATGCATAATGAACCGTTTACAGTGTATTTAAGAAAGGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp TTTCCCTTTCTTAAATACACTGTAAACGGTTCATTATGCATGCAGGACATTGCAACGGTTCATTATGCATaGAGGACATTGCACTTTACA +
Preference number: 4 (lower is better)
Translates to: FPFLKYTVNGSLCMQDIATVHYA*RTLHFT
Trigger: TGTAAAGTGCAATGTCCTGCATGCATAATGAACCGT...TGCAATGTCCTGCATGCATAATGAACCGTTTACAGTGTATTTAAGAAAGGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp TCAGAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCGGATTTATTGTAATCTaGTTACAGTCCTTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: SELLTRYGFSSRGTGTCFGFIVI*LQSFAK
Trigger: CTTTGCAAAGGACTGTAAGCAGATTACAATAAATCC...GAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAGTCAATAACTCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp AGAATATTAATGCCCCATATTGACTATACGTTTTATGTGCAAACCAAGGGTAAGCCATATATAAACCCATaGACTCAGCTACAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: RILMPHIDYTFYVQTKGKPYINP*TQLQLL
Trigger: CAGCAACTGTAGCTGAGTCCATGGGTTTATATATGG...CTTACCCTTGGTTTGCACATAAAACGTATAGTCAATATGGGGCATTAATATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TTTCCCTTTCTTAAATACACTGTAAACGGTTCATTATGCATGCAGGACATTGCACTGATAAATCTTAGCTaGACTCATGCTTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: FPFLKYTVNGSLCMQDIALINLS*THASLL
Trigger: CAACAAGGAAGCATGAGTCCAGCTAAGATTTATCAG...TGCAATGTCCTGCATGCATAATGAACCGTTTACAGTGTATTTAAGAAAGGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp AAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTTCTGGTTTTATGTACTaGACAATATTAAGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: KGFKTTEEVSVWLFTTETSGFMY*TILSWP
Trigger: TGGCCAGCTTAATATTGTCCAGTACATAAAACCAGA...AGTCTCTGTTGTAAATAACCACACTGAAACCTCTTCGGTTGTCTTGAAACCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TTTCCCTTTCTTAAATACACTGTAAACGGTTCATTATGCATGCAGGACATTGCAAGCTCCATCTGGTTCTaGTTTTATGTACTGGACAAT +
Preference number: 4 (lower is better)
Translates to: FPFLKYTVNGSLCMQDIASSIWF*FYVLDN
Trigger: ATTGTCCAGTACATAAAACCAGAACCAGATGGAGCT...TGCAATGTCCTGCATGCATAATGAACCGTTTACAGTGTATTTAAGAAAGGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp TTTCCCTTTCTTAAATACACTGTAAACGGTTCATTATGCATGCAGGACATTGCAATAGCTCCCATCATCTaGTTCTTGTTTAATACCCAC +
Preference number: 4 (lower is better)
Translates to: FPFLKYTVNGSLCMQDIAIAPII*FLFNTH
Trigger: GTGGGTATTAAACAAGAACCAGATGATGGGAGCTAT...TGCAATGTCCTGCATGCATAATGAACCGTTTACAGTGTATTTAAGAAAGGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp CTGCATGCTGTGTATTTATTACCTTCAAAGTGTGGCTTTCATATTACTGTGCACCAAGTTTTTAAATCCTaGAAGTACCTTTGCCCACTT +
Preference number: 4 (lower is better)
Translates to: LHAVYLLPSKCGFHITVHQVFKS*KYLCPL
Trigger: AAGTGGGCAAAGGTACTTCCAGGATTTAAAAACTTG...GTGCACAGTAATATGAAAGCCACACTTTGAAGGTAATAAATACACAGCATGCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp AGAATATTAATGCCCCATATTGACTATACGTTTTATGTGCAAACCAAGGGTAAGAAAAACAGGTTTTCTTaGGTCCTTCTGGGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: RILMPHIDYTFYVQTKGKKNRFS*VLLGVE
Trigger: TTCCACACCCAGAAGGACCCAAGAAAACCTGTTTTT...CTTACCCTTGGTTTGCACATAAAACGTATAGTCAATATGGGGCATTAATATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp AGAATATTAATGCCCCATATTGACTATACGTTTTATGTGCAAACCAAGGGTAAGGTGCCTGAACATGAATaGTTGGTTGATTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: RILMPHIDYTFYVQTKGKVPEHE*LVDSCF
Trigger: AAAGCAAGAATCAACCAAGCATTCATGTTCAGGCAC...CTTACCCTTGGTTTGCACATAAAACGTATAGTCAATATGGGGCATTAATATTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp CTGCATGCTGTGTATTTATTACCTTCAAAGTGTGGCTTTCATATTACTGTGCACCATACATTGCATCAGTaGCAAACAAACAGATTAATG +
Preference number: 4 (lower is better)
Translates to: LHAVYLLPSKCGFHITVHHTLHQ*QTNRLM
Trigger: CATTAATCTGTTTGTTTGGCACTGATGCAATGTATG...GTGCACAGTAATATGAAAGCCACACTTTGAAGGTAATAAATACACAGCATGCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp AAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTGGATTTATTGTAATCTaGTTACAGTCCTTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: KGFKTTEEVSVWLFTTETGFIVI*LQSFAK
Trigger: CTTTGCAAAGGACTGTAAGCAGATTACAATAAATCC...AGTCTCTGTTGTAAATAACCACACTGAAACCTCTTCGGTTGTCTTGAAACCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CCA 90 bp TTTCCCTTTCTTAAATACACTGTAAACGGTTCATTATGCATGCAGGACATTGCATCTGGTTTTATGTACTaGACAATATTAAGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: FPFLKYTVNGSLCMQDIASGFMY*TILSWP
Trigger: TGGCCAGCTTAATATTGTCCAGTACATAAAACCAGA...TGCAATGTCCTGCATGCATAATGAACCGTTTACAGTGTATTTAAGAAAGGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp AGAATATTAATGCCCCATATTGACTATACGTTTTATGTGCAAACCAAGGGTAAGTCTCCATCCCAAACCTaGTTAAGTAAGTCAGAATTC +
Preference number: 4 (lower is better)
Translates to: RILMPHIDYTFYVQTKGKSPSQT*LSKSEF
Trigger: GAATTCTGACTTACTTAACCAGGTTTGGGATGGAGA...CTTACCCTTGGTTTGCACATAAAACGTATAGTCAATATGGGGCATTAATATTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR GCA 90 bp AGAATATTAATGCCCCATATTGACTATACGTTTTATGTGCAAACCAAGGGTAAGCATCCTTTGGAATTGTaGTTAGTAGCAGCAAAACTT +
Preference number: 4 (lower is better)
Translates to: RILMPHIDYTFYVQTKGKHPLEL*LVAAKL
Trigger: AAGTTTTGCTGCTACTAAGCACAATTCCAAAGGATG...CTTACCCTTGGTTTGCACATAAAACGTATAGTCAATATGGGGCATTAATATTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CCA 90 bp AGAATATTAATGCCCCATATTGACTATACGTTTTATGTGCAAACCAAGGGTAAGAAACGGGTTTACTGTTaGATTCCCTTTAAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: RILMPHIDYTFYVQTKGKKRVYC*IPFKRG
Trigger: ACCTCTTTTAAAGGGAATCCAACAGTAAACCCGTTT...CTTACCCTTGGTTTGCACATAAAACGTATAGTCAATATGGGGCATTAATATTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp AGAATATTAATGCCCCATATTGACTATACGTTTTATGTGCAAACCAAGGGTAAGAAATTGAGGATTTCATaGTACTTAACGGACTTGAGA +
Preference number: 4 (lower is better)
Translates to: RILMPHIDYTFYVQTKGKKLRIS*YLTDLR
Trigger: TCTCAAGTCCGTTAAGTAGCATGAAATCCTCAATTT...CTTACCCTTGGTTTGCACATAAAACGTATAGTCAATATGGGGCATTAATATTCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR GCA 90 bp AGAATATTAATGCCCCATATTGACTATACGTTTTATGTGCAAACCAAGGGTAAGTGCTTGGTTGATTCTTaGTTTATTGGTACTGAGAAT +
Preference number: 4 (lower is better)
Translates to: RILMPHIDYTFYVQTKGKCLVDS*FIGTEN
Trigger: ATTCTCAGTACCAATAAAGCAAGAATCAACCAAGCA...CTTACCCTTGGTTTGCACATAAAACGTATAGTCAATATGGGGCATTAATATTCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp CCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGCCGTCCCAGCGCACCCTTCCTCTGGGCTTaGCGGGGGTGGGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: PVSMPFRLNLAKMGRPSAPFLWA*RGWGWG
Trigger: CCCCCACCCCCACCCCCGCAAAGCCCAGAGGAAGGG...TGCGCTGGGACGGCCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS TCA 90 bp GCAGCGGGAGAGCCCGAGGCAGCAACGCTCTTGCACCCAGGTGACTaGCTGCACGGGCTTCCTCTGAGCAGCCTGAAGTTGGCTCCCGTC +
Preference number: 5 (lower is better)
Translates to: AAGEPEAATLLHPGD*LHGLPLSSLKLAPV
Trigger: GACGGGAGCCAACTTCAGGCTGCTCAGAGGAAGCCCGTGCAGTCAGTCACCTGGGTGCAAGAGCGTTGCTGCCTCGGGCTCTCCCGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCCCCTTCCTCTGGGCTTaGCGGGGGTGGGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSPFLWA*RGWGWG
Trigger: CCCCCACCCCCACCCCCGCAAAGCCCAGAGGAAGGG...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS GCA 90 bp GTTGTGTTGCCCCGTCAGTGGTGTAGGGGGCACTCCATAGGAAACTaGGGCCTCTATGGCAGGCACTTAGGGCCCTGGGCCTCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: VVLPRQWCRGHSIGN*GLYGRHLGPWASSE
Trigger: TTCTGAAGAGGCCCAGGGCCCTAAGTGCCTGCCATAGAGGCCGCAGTTTCCTATGGAGTGCCCCCTACACCACTGACGGGGCAACACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503313.1
CDS-3UTR CAA 90 bp CCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGCCGTCCCAGCGCAAGAGGAGAGCCCACATaGCTAGCATGTGCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: PVSMPFRLNLAKMGRPSARGEPT*LACAGL
Trigger: CAGCCCTGCACATGCTAGCAATGTGGGCTCTCCTCT...TGCGCTGGGACGGCCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp AAGATGCTCTCTGAGCCATCAAGTTCCCAGTCTCACTCTCGTAGAGCTGGTTCTCCCTTCCTCTGGGCTTaGCGGGGGTGGGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: KMLSEPSSSQSHSRRAGSPFLWA*RGWGWG
Trigger: CCCCCACCCCCACCCCCGCAAAGCCCAGAGGAAGGG...AGAACCAGCTCTACGAGAGTGAGACTGGGAACTTGATGGCTCAGAGAGCATCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp GGGATTGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGATACCTGTTGCAGCGCTaGCCACCGCCACGAAACCCC +
Preference number: 5 (lower is better)
Translates to: GIGGGESFRLLWSRQIHGYLLQR*PPPRNP
Trigger: GGGGTTTCGTGGCGGTGGCAAGCGCTGCAACAGGTA...TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCAATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342437.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp GTAGAGCGGCTTGGCGTTCCCCGACTCCACCTTGGGCAGCTGGTCGCTGATGATAGGAAAAGGGACCTCTaGAGCACCTTTCTCCTGCGT +
Preference number: 5 (lower is better)
Translates to: VERLGVPRLHLGQLVADDRKRDL*STFLLR
Trigger: ACGCAGGAGAAAGGTGCTCAAGAGGTCCCTTTTCCT...ATCATCAGCGACCAGCTGCCCAAGGTGGAGTCGGGGAACGCCAAGCCGCTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342437.8
CDS-3UTR CAA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCTTCCCCGACTCCACCTaGGGCAGCTGGTCGCTGATG +
Preference number: 5 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSFPDST*GSWSLM
Trigger: CATCAGCGACCAGCTGCCCAAGGTGGAGTCGGGGAA...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp TCCACCAGCATTGCGGGGAACTCTACCTTCAGCGCATGGGACTCTCGGAAGGTGCTAAGCGCTGGGGGATaGGAGGTGGGGAATCCTTCA +
Preference number: 5 (lower is better)
Translates to: STSIAGNSTFSAWDSRKVLSAGG*EVGNPS
Trigger: TGAAGGATTCCCCACCTCCAATCCCCCAGCGCTTAG...CACCTTCCGAGAGTCCCATGCGCTGAAGGTAGAGTTCCCCGCAATGCTGGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000342437.8
CDS-3UTR CAA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGCTCGCCGTCTACCTGTaGCAGCGCTTGCCACCGCCA +
Preference number: 5 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGLAVYL*QRLPPP
Trigger: TGGCGGTGGCAAGCGCTGCAACAGGTAGACGGCGAG...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342437.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACCTCGCCGTCTACCTGTaGCAGCGCTTGCCACCGCCA +
Preference number: 5 (lower is better)
Translates to: WRWGILQTALVSPNPRKNLAVYL*QRLPPP
Trigger: TGGCGGTGGCAAGCGCTGCAACAGGTAGACGGCGAG...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342437.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp CTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACACTCGCCGTCTACCTGTaGCAGCGCTTGCCACCGCCA +
Preference number: 5 (lower is better)
Translates to: LVSPNPRKNSFPGSKPLTLAVYL*QRLPPP
Trigger: TGGCGGTGGCAAGCGCTGCAACAGGTAGACGGCGAG...TGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342437.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS GCA 90 bp TGTGGAGAGCTGAGGAACCAGTGCTGTGTTGACCGAGGGTTCTTTTaGAGGAGCGATGTACGTTGTCCCTTCCTCTGGGCTTTGCGGGGG +
Preference number: 5 (lower is better)
Translates to: CGELRNQCCVDRGFF*RSDVRCPFLWALRG
Trigger: CCCCCGCAAAGCCCAGAGGAAGGGACAACGTACATCGCTCCTGCAAAAGAACCCTCGGTCAACACAGCACTGGTTCCTCAGCTCTCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000503174.1
ENST00000503313.1
ENST00000511528.1
ENST00000625323.2
CDS-3UTR CAA 90 bp CTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATTCCCCGACTCCACCTaGGGCAGCTGGTCGCTGATG +
Preference number: 5 (lower is better)
Translates to: LVSPNPRKNSFPGSKPLTFPDST*GSWSLM
Trigger: CATCAGCGACCAGCTGCCCAAGGTGGAGTCGGGGAA...TGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGTACCTGTTGCAGCGCTaGCCACCGCCACGAAACCCC +
Preference number: 5 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGYLLQR*PPPRNP
Trigger: GGGGTTTCGTGGCGGTGGCAAGCGCTGCAACAGGTA...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342437.8
ENST00000358102.8
ENST00000625323.2
CDS TCA 90 bp ACCATAACGGGGGAAGGTGTGAGCGCTCGTGAGATTGTGGAGAGCTaGGGAACCAGTGCTGTGTTGACCGAGGGTTCTTTTGCAGGAGCG +
Preference number: 5 (lower is better)
Translates to: TITGEGVSAREIVES*GTSAVLTEGSFAGA
Trigger: CGCTCCTGCAAAAGAACCCTCGGTCAACACAGCACTGGTTCCTCAGCTCTCCACAATCTCACGAGCGCTCACACCTTCCCCCGTTATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000503174.1
ENST00000503313.1
ENST00000511528.1
ENST00000625323.2
CDS-3UTR CAA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGAGAGGAGAGCCCACATaGCTAGCATGTGCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLRGEPT*LACAGL
Trigger: CAGCCCTGCACATGCTAGCAATGTGGGCTCTCCTCT...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp CCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGCCGTCCCAGCGCATGCTACTTAACGGACTaGAGAGAGGAGAGCCCACAT +
Preference number: 5 (lower is better)
Translates to: PVSMPFRLNLAKMGRPSACYLTD*REESPH
Trigger: ATGTGGGCTCTCCTCTCTCAAGTCCGTTAAGTAGCA...TGCGCTGGGACGGCCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp CTAAAACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGTACCTGTTGCAGCGCTaGCCACCGCCACGAAACCCC +
Preference number: 5 (lower is better)
Translates to: LKPLYLPVSMPFRLNLAKYLLQR*PPPRNP
Trigger: GGGGTTTCGTGGCGGTGGCAAGCGCTGCAACAGGTA...CTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGTTTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358102.8
ENST00000625323.2
CDS GCA 90 bp ACATTAGGGGAGCATGTCAGAGGAGTTCCCTGGGTGATTGGGCTGTaGACTGGAAAACTGCCAAAGCTGGCTGTGGTGGAGGACACAGAG +
Preference number: 5 (lower is better)
Translates to: TLGEHVRGVPWVIGL*TGKLPKLAVVEDTE
Trigger: CTCTGTGTCCTCCACCACAGCCAGCTTTGGCAGTTTTCCAGTGCACAGCCCAATCACCCAGGGAACTCCTCTGACATGCTCCCCTAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS CCA 90 bp AGGGGAGCATGTCAGAGGAGTTCCCTGGGTGATTGGGCTGTGCACTaGAAAACTGCCAAAGCTGGCTGTGGTGGAGGACACAGAGTTGAT +
Preference number: 5 (lower is better)
Translates to: RGACQRSSLGDWAVH*KTAKAGCGGGHRVD
Trigger: ATCAACTCTGTGTCCTCCACCACAGCCAGCTTTGGCAGTTTTCCAGTGCACAGCCCAATCACCCAGGGAACTCCTCTGACATGCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp CCAGAAAACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAAGAGGAGAGCCCACATaGCTAGCATGTGCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: PENVLESHKCPKRETKNKRGEPT*LACAGL
Trigger: CAGCCCTGCACATGCTAGCAATGTGGGCTCTCCTCT...TTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGTTTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATAGAGGAGAGCCCACATaGCTAGCATGTGCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNRGEPT*LACAGL
Trigger: CAGCCCTGCACATGCTAGCAATGTGGGCTCTCCTCT...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp GGGATTGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAGGAAAAGGGACCTCTaGAGCACCTTTCTCCTGCGT +
Preference number: 5 (lower is better)
Translates to: GIGGGESFRLLWSRQIHGRKRDL*STFLLR
Trigger: ACGCAGGAGAAAGGTGCTCAAGAGGTCCCTTTTCCT...TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCAATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCCAGGAGCGATGTACGTaGTCCCTTCCTCTGGGCTTT +
Preference number: 5 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSQERCT*SLPLGF
Trigger: AAAGCCCAGAGGAAGGGACAACGTACATCGCTCCTG...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp CCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGCCGTCCCAGCGCACTCTGCCCAGAATTGTaGGGACACTTAGTTACCATC +
Preference number: 5 (lower is better)
Translates to: PVSMPFRLNLAKMGRPSALCPEL*GHLVTI
Trigger: GATGGTAACTAAGTGTCCCAACAATTCTGGGCAGAG...TGCGCTGGGACGGCCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS TCA 90 bp GCACTGGAAAACTGCCAAAGCTGGCTGTGGTGGAGGACACAGAGTTaGTTCCAGCAGGGCTGCAAACCGAAGATGTCATGTTCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: ALENCQSWLWWRTQS*FQQGCKPKMSCSEG
Trigger: GCCCTCTGAACATGACATCTTCGGTTTGCAGCCCTGCTGGAATCAACTCTGTGTCCTCCACCACAGCCAGCTTTGGCAGTTTTCCAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS TCA 90 bp GAGATGGCACTCTCTACTTCCTCAGTCTTAGGAAAAGGGACCTCTTaGGCACCTTTCTCCTGCGTGTCTGGACTGGGAACCACATCCCGC +
Preference number: 5 (lower is better)
Translates to: EMALSTSSVLGKGTS*APFSCVSGLGTTSR
Trigger: GCGGGATGTGGTTCCCAGTCCAGACACGCAGGAGAAAGGTGCTCAAGAGGTCCCTTTTCCTAAGACTGAGGAAGTAGAGAGTGCCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS GCA 90 bp GGACTTGAGAGAGGAGAGCCCACATTGCTAGCATGTGCAGGGCTGTaGGACCTGGAGCCTCGATTTTCAACATTAGGGGAGCATGTCAGA +
Preference number: 5 (lower is better)
Translates to: GLERGEPTLLACAGL*DLEPRFSTLGEHVR
Trigger: TCTGACATGCTCCCCTAATGTTGAAAATCGAGGCTCCAGGTCGCACAGCCCTGCACATGCTAGCAATGTGGGCTCTCCTCTCTCAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp ACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGCACAGCCTGAGAAACTaGACCCCACCGTCTTTCCAT +
Preference number: 5 (lower is better)
Translates to: TPLSPGLHAIQTEPCQDGHSLRN*TPPSFH
Trigger: ATGGAAAGACGGTGGGGTCAAGTTTCTCAGGCTGTG...CCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGAGGAAAAGGGACCTCTaGAGCACCTTTCTCCTGCGT +
Preference number: 5 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLRKRDL*STFLLR
Trigger: ACGCAGGAGAAAGGTGCTCAAGAGGTCCCTTTTCCT...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp GGGATTGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAGGCCAGTCACACCATTaGAGATGGCACTCTCTACTT +
Preference number: 5 (lower is better)
Translates to: GIGGGESFRLLWSRQIHGGQSHH*RWHSLL
Trigger: AAGTAGAGAGTGCCATCTCAAATGGTGTGACTGGCC...TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCAATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCTGCCCACTTCACGACTaGGATCATCTGTTTGCCTGC +
Preference number: 5 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSCPLHD*DHLFAC
Trigger: GCAGGCAAACAGATGATCCAAGTCGTGAAGTGGGCA...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCTAAGCGCTGGGGGATaGGAGGTGGGGAATCCTTCA +
Preference number: 5 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSLSAGG*EVGNPS
Trigger: TGAAGGATTCCCCACCTCCAATCCCCCAGCGCTTAG...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp CTAAAACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGCTAAGCGCTGGGGGATaGGAGGTGGGGAATCCTTCA +
Preference number: 5 (lower is better)
Translates to: LKPLYLPVSMPFRLNLAKLSAGG*EVGNPS
Trigger: TGAAGGATTCCCCACCTCCAATCCCCCAGCGCTTAG...CTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGTTTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS TCA 90 bp TTCAATGTTTTCAAGGACCATAACGGGGGAAGGTGTGAGCGCTCGTaGGATTGTGGAGAGCTGAGGAACCAGTGCTGTGTTGACCGAGGG +
Preference number: 5 (lower is better)
Translates to: FNVFKDHNGGRCERS*DCGELRNQCCVDRG
Trigger: CCCTCGGTCAACACAGCACTGGTTCCTCAGCTCTCCACAATCTCACGAGCGCTCACACCTTCCCCCGTTATGGTCCTTGAAAACATTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000503174.1
ENST00000503313.1
ENST00000511528.1
ENST00000625323.2
CDS CCA 90 bp AGTCTTAGGAAAAGGGACCTCTTGAGCACCTTTCTCCTGCGTGTCTaGACTGGGAACCACATCCCGCAATGTACTGGATCCAGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: SLRKRDLLSTFLLRV*TGNHIPQCTGSSRG
Trigger: ACCTCTGCTGGATCCAGTACATTGCGGGATGTGGTTCCCAGTCCAGACACGCAGGAGAAAGGTGCTCAAGAGGTCCCTTTTCCTAAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGCACAGCCTGAGAAACTaGACCCCACCGTCTTTCCAT +
Preference number: 5 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGHSLRN*TPPSFH
Trigger: ATGGAAAGACGGTGGGGTCAAGTTTCTCAGGCTGTG...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp GAGGGCTCAGAGGCAGCTGCTGCCCCACGCCACGAGTTCTGTTATTACACAACATGGACTCATGCTTCCTaGTTGGTTCTGCTGCTCATA +
Preference number: 5 (lower is better)
Translates to: EGSEAAAAPRHEFCYYTTWTHAS*LVLLLI
Trigger: TATGAGCAGCAGAACCAACAAGGAAGCATGAGTCCA...TGTTGTGTAATAACAGAACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCGTGGAGGACACAGAGTaGATTCCAGCAGGGCTGCAA +
Preference number: 5 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSVEDTE*IPAGLQ
Trigger: TTGCAGCCCTGCTGGAATCAACTCTGTGTCCTCCAC...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGTGCTACTTAACGGACTaGAGAGAGGAGAGCCCACAT +
Preference number: 5 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLCYLTD*REESPH
Trigger: ATGTGGGCTCTCCTCTCTCAAGTCCGTTAAGTAGCA...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp CCAGAAAACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAGGAACCAGTGCTGTGTaGACCGAGGGTTCTTTTGCA +
Preference number: 5 (lower is better)
Translates to: PENVLESHKCPKRETKNKGTSAV*TEGSFA
Trigger: TGCAAAAGAACCCTCGGTCAACACAGCACTGGTTCC...TTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGTTTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATTTGCCTGCTAAGCGGTaGAGCGTGGAGAGCAGATTT +
Preference number: 5 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNLPAKR*SVESRF
Trigger: AAATCTGCTCTCCACGCTCAACCGCTTAGCAGGCAA...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp CCAGAAAACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAATTGCCTGCTAAGCGGTaGAGCGTGGAGAGCAGATTT +
Preference number: 5 (lower is better)
Translates to: PENVLESHKCPKRETKNKLPAKR*SVESRF
Trigger: AAATCTGCTCTCCACGCTCAACCGCTTAGCAGGCAA...TTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGTTTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp TCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGTTCCCCGACTCCACCTaGGGCAGCTGGTCGCTGATG +
Preference number: 5 (lower is better)
Translates to: STEKQLSRLQTSDMTLNLFPDST*GSWSLM
Trigger: CATCAGCGACCAGCTGCCCAAGGTGGAGTCGGGGAA...CAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp AAGATGCTCTCTGAGCCATCAAGTTCCCAGTCTCACTCTCGTAGAGCTGGTTCTCTAAGCGCTGGGGGATaGGAGGTGGGGAATCCTTCA +
Preference number: 5 (lower is better)
Translates to: KMLSEPSSSQSHSRRAGSLSAGG*EVGNPS
Trigger: TGAAGGATTCCCCACCTCCAATCCCCCAGCGCTTAG...AGAACCAGCTCTACGAGAGTGAGACTGGGAACTTGATGGCTCAGAGAGCATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp ACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAACAAAAACTAAGCGCTGGGGGATaGGAGGTGGGGAATCCTTCA +
Preference number: 5 (lower is better)
Translates to: TCWSPTNAPSGRPRTKQKLSAGG*EVGNPS
Trigger: TGAAGGATTCCCCACCTCCAATCCCCCAGCGCTTAG...TTTTTGTTTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS CCA 90 bp AGCTGCCCTCACACAACTAGTGCTTCAGACGCAAGATGGTGTGGGTaGAAGTCACCTTCATCCCAGAGAGACACTCAGAGAATCCACAGA +
Preference number: 5 (lower is better)
Translates to: SCPHTTSASDARWCG*KSPSSQRDTQRIHR
Trigger: TCTGTGGATTCTCTGAGTGTCTCTCTGGGATGAAGGTGACTTCCACCCACACCATCTTGCGTCTGAAGCACTAGTTGTGTGAGGGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503313.1
CDS-3UTR CAA 90 bp ACAACACAGGGAAACTTAAGGCAAAGTTCTTCTGGGCAGCGGGCAGTCACTTCCCACAGCCTGAGAAACTaGACCCCACCGTCTTTCCAT +
Preference number: 5 (lower is better)
Translates to: TTQGNLRQSSSGQRAVTSHSLRN*TPPSFH
Trigger: ATGGAAAGACGGTGGGGTCAAGTTTCTCAGGCTGTG...GGAAGTGACTGCCCGCTGCCCAGAAGAACTTTGCCTTAAGTTTCCCTGTGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342437.8
CDS-3UTR CAA 90 bp CTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGGTGGAGGACACAGAGTaGATTCCAGCAGGGCTGCAA +
Preference number: 5 (lower is better)
Translates to: LDMAFHPEEQEHVSKRWGVEDTE*IPAGLQ
Trigger: TTGCAGCCCTGCTGGAATCAACTCTGTGTCCTCCAC...CCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATTGCTACTTAACGGACTaGAGAGAGGAGAGCCCACAT +
Preference number: 5 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNCYLTD*REESPH
Trigger: ATGTGGGCTCTCCTCTCTCAAGTCCGTTAAGTAGCA...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp CTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGCTACTTAACGGACTaGAGAGAGGAGAGCCCACAT +
Preference number: 5 (lower is better)
Translates to: LVSPNPRKNSFPGSKPLTCYLTD*REESPH
Trigger: ATGTGGGCTCTCCTCTCTCAAGTCCGTTAAGTAGCA...TGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACTGCTACTTAACGGACTaGAGAGAGGAGAGCCCACAT +
Preference number: 5 (lower is better)
Translates to: WRWGILQTALVSPNPRKNCYLTD*REESPH
Trigger: ATGTGGGCTCTCCTCTCTCAAGTCCGTTAAGTAGCA...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp CTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATTACACTGCAGTGACTaGGAGGGCTGGAAATTGAGG +
Preference number: 5 (lower is better)
Translates to: LVSPNPRKNSFPGSKPLTLHCSD*EGWKLR
Trigger: CCTCAATTTCCAGCCCTCCAAGTCACTGCAGTGTAA...TGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACTTACACTGCAGTGACTaGGAGGGCTGGAAATTGAGG +
Preference number: 5 (lower is better)
Translates to: WRWGILQTALVSPNPRKNLHCSD*EGWKLR
Trigger: CCTCAATTTCCAGCCCTCCAAGTCACTGCAGTGTAA...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGTTACACTGCAGTGACTaGGAGGGCTGGAAATTGAGG +
Preference number: 5 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGLHCSD*EGWKLR
Trigger: CCTCAATTTCCAGCCCTCCAAGTCACTGCAGTGTAA...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACGGCCAGTCACACCATTaGAGATGGCACTCTCTACTT +
Preference number: 5 (lower is better)
Translates to: WRWGILQTALVSPNPRKNGQSHH*RWHSLL
Trigger: AAGTAGAGAGTGCCATCTCAAATGGTGTGACTGGCC...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp CCAGAAAACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAGGCCAGTCACACCATTaGAGATGGCACTCTCTACTT +
Preference number: 5 (lower is better)
Translates to: PENVLESHKCPKRETKNKGQSHH*RWHSLL
Trigger: AAGTAGAGAGTGCCATCTCAAATGGTGTGACTGGCC...TTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGTTTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp GAGGGCTCAGAGGCAGCTGCTGCCCCACGCCACGAGTTCTGTTATTACACAACAAAAGGAACTCAGGTGTaGGAAAGATTGGTCTCTAGC +
Preference number: 5 (lower is better)
Translates to: EGSEAAAAPRHEFCYYTTKGTQV*ERLVSS
Trigger: GCTAGAGACCAATCTTTCCAACACCTGAGTTCCTTT...TGTTGTGTAATAACAGAACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp GGGATTGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAGACTCCACTAAAGTATaGACAGGAGGAAAGGAACTC +
Preference number: 5 (lower is better)
Translates to: GIGGGESFRLLWSRQIHGDSTKV*TGGKEL
Trigger: GAGTTCCTTTCCTCCTGTCAATACTTTAGTGGAGTC...TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCAATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp ACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAACAAAAACAGGAGCGATGTACGTaGTCCCTTCCTCTGGGCTTT +
Preference number: 5 (lower is better)
Translates to: TCWSPTNAPSGRPRTKQKQERCT*SLPLGF
Trigger: AAAGCCCAGAGGAAGGGACAACGTACATCGCTCCTG...TTTTTGTTTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGCGGCTGTATCTGGTTTaGAGCTGTCATAGCCTGCAT +
Preference number: 5 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGRLYLV*SCHSLH
Trigger: ATGCAGGCTATGACAGCTCAAAACCAGATACAGCCG...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGACTTGGATCATCTGTTaGCCTGCTAAGCGGTTGAGC +
Preference number: 5 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGTWIIC*PAKRLS
Trigger: GCTCAACCGCTTAGCAGGCAAACAGATGATCCAAGT...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp CTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACAATCCTGGAAGTACCTTaGCCCACTTCACGACTTGGA +
Preference number: 5 (lower is better)
Translates to: LVSPNPRKNSFPGSKPLTILEVP*PTSRLG
Trigger: TCCAAGTCGTGAAGTGGGCAAAGGTACTTCCAGGAT...TGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp ACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGTGGCTGTTCGTATGTTaGTACGATCTCCAGCTCAAG +
Preference number: 5 (lower is better)
Translates to: TPLSPGLHAIQTEPCQDGWLFVC*YDLQLK
Trigger: CTTGAGCTGGAGATCGTACAAACATACGAACAGCCA...CCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATCCTCTCCCACATGTGTaGTCAAATGACACCTTCCAG +
Preference number: 5 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNPLPHV*SNDTFQ
Trigger: CTGGAAGGTGTCATTTGACAACACATGTGGGAGAGG...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp CCAGAAAACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAACCTCTCCCACATGTGTaGTCAAATGACACCTTCCAG +
Preference number: 5 (lower is better)
Translates to: PENVLESHKCPKRETKNKPLPHV*SNDTFQ
Trigger: CTGGAAGGTGTCATTTGACAACACATGTGGGAGAGG...TTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGTTTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp TCAGAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCCTGAGCAGCCTGAAGTaGGCTCCCGTCTCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: SELLTRYGFSSRGTGTCFLSSLK*APVSRA
Trigger: GGCCCGGGAGACGGGAGCCAACTTCAGGCTGCTCAG...GAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAGTCAATAACTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358102.8
ENST00000625323.2
CDS TCA 90 bp GAAGATGTCATGTTCAGAGGGCTGCAAACAGACGGGCTTTTCTCATaGCACATGATAGGGCTTTTAACAACGGCGCGCATGACGCCACCA +
Preference number: 5 (lower is better)
Translates to: EDVMFRGLQTDGLFS*HMIGLLTTARMTPP
Trigger: TGGTGGCGTCATGCGCGCCGTTGTTAAAAGCCCTATCATGTGTCATGAGAAAAGCCCGTCTGTTTGCAGCCCTCTGAACATGACATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS TCA 90 bp TATTGTACCTTGAGCACCAATCCTGTAGTGGAAGGACTGTCCACCTaGATTCACCCCAACAATAGCAGAGGAAGGGATGCTGGCCTCTGG +
Preference number: 5 (lower is better)
Translates to: YCTLSTNPVVEGLST*IHPNNSRGRDAGLW
Trigger: CCAGAGGCCAGCATCCCTTCCTCTGCTATTGTTGGGGTGAATTCAGGTGGACAGTCCTTCCACTACAGGATTGGTGCTCAAGGTACAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS TCA 90 bp TCACCTTCATCCCAGAGAGACACTCAGAGAATCCACAGAGGCATGTaGAGTGCCACTAAGACTTCAACCCTCTCTCACTCTCGCCAACAG +
Preference number: 5 (lower is better)
Translates to: SPSSQRDTQRIHRGM*SATKTSTLSHSRQQ
Trigger: CTGTTGGCGAGAGTGAGAGAGGGTTGAAGTCTTAGTGGCACTTCACATGCCTCTGTGGATTCTCTGAGTGTCTCTCTGGGATGAAGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503313.1
CDS CCA 90 bp CTCTGGGTAATAGCTCCCATCATCTGGTTCTTGTTTAATACCCACTaGGAATCCGCTGCCTTCACAGTTACCATCAAAGCCGGGCACAGG +
Preference number: 5 (lower is better)
Translates to: LWVIAPIIWFLFNTH*ESAAFTVTIKAGHR
Trigger: CCTGTGCCCGGCTTTGATGGTAACTGTGAAGGCAGCGGATTCCCAGTGGGTATTAAACAAGAACCAGATGATGGGAGCTATTACCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS CCA 90 bp AGCAGAGGAAGGGATGCTGGCCTCTGGGTAATAGCTCCCATCATCTaGTTCTTGTTTAATACCCACTGGGAATCCGCTGCCTTCACAGTT +
Preference number: 5 (lower is better)
Translates to: SRGRDAGLWVIAPII*FLFNTHWESAAFTV
Trigger: AACTGTGAAGGCAGCGGATTCCCAGTGGGTATTAAACAAGAACCAGATGATGGGAGCTATTACCCAGAGGCCAGCATCCCTTCCTCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp CTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGCACAGCCTGAGAAACTaGACCCCACCGTCTTTCCAT +
Preference number: 5 (lower is better)
Translates to: LDMAFHPEEQEHVSKRWGHSLRN*TPPSFH
Trigger: ATGGAAAGACGGTGGGGTCAAGTTTCTCAGGCTGTG...CCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGTGGACTCATGCTTCCTaGTTGGTTCTGCTGCTCATA +
Preference number: 5 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGWTHAS*LVLLLI
Trigger: TATGAGCAGCAGAACCAACAAGGAAGCATGAGTCCA...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp CCAGAAAACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAATGGACTCATGCTTCCTaGTTGGTTCTGCTGCTCATA +
Preference number: 5 (lower is better)
Translates to: PENVLESHKCPKRETKNKWTHAS*LVLLLI
Trigger: TATGAGCAGCAGAACCAACAAGGAAGCATGAGTCCA...TTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGTTTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp TCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGAGGAGAGCCCACATaGCTAGCATGTGCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: STEKQLSRLQTSDMTLNLRGEPT*LACAGL
Trigger: CAGCCCTGCACATGCTAGCAATGTGGGCTCTCCTCT...CAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp GGGATTGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGATTGGAGGGCTGGAAATaGAGGATTTCATGCTACTTA +
Preference number: 5 (lower is better)
Translates to: GIGGGESFRLLWSRQIHGLEGWK*RISCYL
Trigger: TAAGTAGCATGAAATCCTCAATTTCCAGCCCTCCAA...TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCAATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp CTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACACTCAGAGTGACATTATaGGGACTGGAGACTGGAGAT +
Preference number: 5 (lower is better)
Translates to: LVSPNPRKNSFPGSKPLTLRVTL*GLETGD
Trigger: ATCTCCAGTCTCCAGTCCCAATAATGTCACTCTGAG...TGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp AAGATGCTCTCTGAGCCATCAAGTTCCCAGTCTCACTCTCGTAGAGCTGGTTCTGGAACCAGTGCTGTGTaGACCGAGGGTTCTTTTGCA +
Preference number: 5 (lower is better)
Translates to: KMLSEPSSSQSHSRRAGSGTSAV*TEGSFA
Trigger: TGCAAAAGAACCCTCGGTCAACACAGCACTGGTTCC...AGAACCAGCTCTACGAGAGTGAGACTGGGAACTTGATGGCTCAGAGAGCATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp ACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAACAAAAATGCCCACTTCACGACTaGGATCATCTGTTTGCCTGC +
Preference number: 5 (lower is better)
Translates to: TCWSPTNAPSGRPRTKQKCPLHD*DHLFAC
Trigger: GCAGGCAAACAGATGATCCAAGTCGTGAAGTGGGCA...TTTTTGTTTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp CTAAAACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATCCTGGAAGTACCTTaGCCCACTTCACGACTTGGA +
Preference number: 5 (lower is better)
Translates to: LKPLYLPVSMPFRLNLAKILEVP*PTSRLG
Trigger: TCCAAGTCGTGAAGTGGGCAAAGGTACTTCCAGGAT...CTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGTTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATTGGCTGTTCGTATGTTaGTACGATCTCCAGCTCAAG +
Preference number: 5 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNWLFVC*YDLQLK
Trigger: CTTGAGCTGGAGATCGTACAAACATACGAACAGCCA...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp CTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGGCTGTTCGTATGTTaGTACGATCTCCAGCTCAAG +
Preference number: 5 (lower is better)
Translates to: LVSPNPRKNSFPGSKPLTWLFVC*YDLQLK
Trigger: CTTGAGCTGGAGATCGTACAAACATACGAACAGCCA...TGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGGGCCATCCTTTGGAATaGTGCTTAGTAGCAGCAAAA +
Preference number: 5 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLGHPLE*CLVAAK
Trigger: TTTTGCTGCTACTAAGCACAATTCCAAAGGATGGCC...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp TTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGCTCTGCCCAGAATTGTaGGGACACTTAGTTACCATC +
Preference number: 5 (lower is better)
Translates to: FHPEEQEHVSKRWGIGGGLCPEL*GHLVTI
Trigger: GATGGTAACTAAGTGTCCCAACAATTCTGGGCAGAG...CCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCAGCTCTGCCCAGAATaGTTGGGACACTTAGTTACC +
Preference number: 5 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSQLCPE*LGHLVT
Trigger: GGTAACTAAGTGTCCCAACAATTCTGGGCAGAGCTG...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp CTAAAACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGCAGCTCTGCCCAGAATaGTTGGGACACTTAGTTACC +
Preference number: 5 (lower is better)
Translates to: LKPLYLPVSMPFRLNLAKQLCPE*LGHLVT
Trigger: GGTAACTAAGTGTCCCAACAATTCTGGGCAGAGCTG...CTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGTTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp TCAGAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCCTCGCCGTCTACCTGTaGCAGCGCTTGCCACCGCCA +
Preference number: 5 (lower is better)
Translates to: SELLTRYGFSSRGTGTCFLAVYL*QRLPPP
Trigger: TGGCGGTGGCAAGCGCTGCAACAGGTAGACGGCGAG...GAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAGTCAATAACTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342437.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS TCA 90 bp TTGCCCACTTCACGACTTGGATCATCTGTTTGCCTGCTAAGCGGTTaGGCGTGGAGAGCAGATTTTCGGCTGTATCTGGTTTTGAGCTGT +
Preference number: 5 (lower is better)
Translates to: LPTSRLGSSVCLLSG*AWRADFRLYLVLSC
Trigger: ACAGCTCAAAACCAGATACAGCCGAAAATCTGCTCTCCACGCTCAACCGCTTAGCAGGCAAACAGATGATCCAAGTCGTGAAGTGGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000503174.1
ENST00000503313.1
ENST00000511528.1
ENST00000625323.2
CDS GCA 90 bp GAAGGCATTGTTTACAGGGCTACAGATAGATCCCACAGTACTGGCTaGCGGACTGGAAAGCGTGGATCTGTTATTAGTGTTCGAAGGGCT +
Preference number: 5 (lower is better)
Translates to: EGIVYRATDRSHSTG*RTGKRGSVISVRRA
Trigger: AGCCCTTCGAACACTAATAACAGATCCACGCTTTCCAGTCCGGCAGCCAGTACTGTGGGATCTATCTGTAGCCCTGTAAACAATGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp CTAAAACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGTGGACTCATGCTTCCTaGTTGGTTCTGCTGCTCATA +
Preference number: 5 (lower is better)
Translates to: LKPLYLPVSMPFRLNLAKWTHAS*LVLLLI
Trigger: TATGAGCAGCAGAACCAACAAGGAAGCATGAGTCCA...CTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGTTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCTTGGAGGGCTGGAAATaGAGGATTTCATGCTACTTA +
Preference number: 5 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSLEGWK*RISCYL
Trigger: TAAGTAGCATGAAATCCTCAATTTCCAGCCCTCCAA...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp AAGATGCTCTCTGAGCCATCAAGTTCCCAGTCTCACTCTCGTAGAGCTGGTTCTTTACACTGCAGTGACTaGGAGGGCTGGAAATTGAGG +
Preference number: 5 (lower is better)
Translates to: KMLSEPSSSQSHSRRAGSLHCSD*EGWKLR
Trigger: CCTCAATTTCCAGCCCTCCAAGTCACTGCAGTGTAA...AGAACCAGCTCTACGAGAGTGAGACTGGGAACTTGATGGCTCAGAGAGCATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACAGAGCACCTTGAGTaGTTAATATTTGCAGGGCTA +
Preference number: 5 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLTEHLE*LIFAGL
Trigger: TAGCCCTGCAAATATTAACAACTCAAGGTGCTCTGT...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp CTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGGGCCAGTCACACCATTaGAGATGGCACTCTCTACTT +
Preference number: 5 (lower is better)
Translates to: LDMAFHPEEQEHVSKRWGGQSHH*RWHSLL
Trigger: AAGTAGAGAGTGCCATCTCAAATGGTGTGACTGGCC...CCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAG
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp AAGATGCTCTCTGAGCCATCAAGTTCCCAGTCTCACTCTCGTAGAGCTGGTTCTGGCCAGTCACACCATTaGAGATGGCACTCTCTACTT +
Preference number: 5 (lower is better)
Translates to: KMLSEPSSSQSHSRRAGSGQSHH*RWHSLL
Trigger: AAGTAGAGAGTGCCATCTCAAATGGTGTGACTGGCC...AGAACCAGCTCTACGAGAGTGAGACTGGGAACTTGATGGCTCAGAGAGCATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATCCCATCATCTGGTTCTaGTTTAATACCCACTGGGAA +
Preference number: 5 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNPIIWF*FNTHWE
Trigger: TTCCCAGTGGGTATTAAACAAGAACCAGATGATGGG...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp GAGGGCTCAGAGGCAGCTGCTGCCCCACGCCACGAGTTCTGTTATTACACAACAATCGTGATAAAGATATaGTACCTTGAGCACCAATCC +
Preference number: 5 (lower is better)
Translates to: EGSEAAAAPRHEFCYYTTIVIKI*YLEHQS
Trigger: GGATTGGTGCTCAAGGTACAATATCTTTATCACGAT...TGTTGTGTAATAACAGAACTCGTGGCGTGGGGCAGCAGCTGCCTCTGAGCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp AAGATGCTCTCTGAGCCATCAAGTTCCCAGTCTCACTCTCGTAGAGCTGGTTCTATCCTGGAAGTACCTTaGCCCACTTCACGACTTGGA +
Preference number: 5 (lower is better)
Translates to: KMLSEPSSSQSHSRRAGSILEVP*PTSRLG
Trigger: TCCAAGTCGTGAAGTGGGCAAAGGTACTTCCAGGAT...AGAACCAGCTCTACGAGAGTGAGACTGGGAACTTGATGGCTCAGAGAGCATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATGGCCATCCTTTGGAATaGTGCTTAGTAGCAGCAAAA +
Preference number: 5 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNGHPLE*CLVAAK
Trigger: TTTTGCTGCTACTAAGCACAATTCCAAAGGATGGCC...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCTCTGCCCAGAATTGTaGGGACACTTAGTTACCATC +
Preference number: 5 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSLCPEL*GHLVTI
Trigger: GATGGTAACTAAGTGTCCCAACAATTCTGGGCAGAG...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp ACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGGAGAAAAGCCATACATaGCATCAGTGCCAAACAAAC +
Preference number: 5 (lower is better)
Translates to: TPLSPGLHAIQTEPCQDGEKSHT*HQCQTN
Trigger: GTTTGTTTGGCACTGATGCAATGTATGGCTTTTCTC...CCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp GGGATTGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAACATATGTTTGTGATTaGGGGCAAGAGAAAAGCCAT +
Preference number: 5 (lower is better)
Translates to: GIGGGESFRLLWSRQIHGTYVCD*GQEKSH
Trigger: ATGGCTTTTCTCTTGCCCCAAATCACAAACATATGT...TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp GGGATTGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAACTGTGCACCGTAAGTaGACTGTATTTAAAGATCTG +
Preference number: 5 (lower is better)
Translates to: GIGGGESFRLLWSRQIHGTVHRK*TVFKDL
Trigger: CAGATCTTTAAATACAGTCAACTTACGGTGCACAGT...TCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp TTTCCCTTTCTTAAATACACTGTAAACGGTTCATTATGCATGCAGGACATTGCACTGAGCAGCCTGAAGTaGGCTCCCGTCTCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: FPFLKYTVNGSLCMQDIALSSLK*APVSRA
Trigger: GGCCCGGGAGACGGGAGCCAACTTCAGGCTGCTCAG...TGCAATGTCCTGCATGCATAATGAACCGTTTACAGTGTATTTAAGAAAGGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358102.8
ENST00000625323.2
CDS CCA 90 bp GGCAAGTTTTTAAATCCTGGAAGTACCTTTGCCCACTTCACGACTTaGATCATCTGTTTGCCTGCTAAGCGGTTGAGCGTGGAGAGCAGA +
Preference number: 5 (lower is better)
Translates to: GKFLNPGSTFAHFTT*IICLPAKRLSVESR
Trigger: TCTGCTCTCCACGCTCAACCGCTTAGCAGGCAAACAGATGATCCAAGTCGTGAAGTGGGCAAAGGTACTTCCAGGATTTAAAAACTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000503174.1
ENST00000503313.1
ENST00000511528.1
ENST00000625323.2
CDS-3UTR CAA 90 bp ACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGAGTGGAGGACACAGAGTaGATTCCAGCAGGGCTGCAA +
Preference number: 5 (lower is better)
Translates to: TEKQLSRLQTSDMTLNLRVEDTE*IPAGLQ
Trigger: TTGCAGCCCTGCTGGAATCAACTCTGTGTCCTCCAC...TCTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp TGGAGGTGGGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACTTGGAGGGCTGGAAATaGAGGATTTCATGCTACTTA +
Preference number: 5 (lower is better)
Translates to: WRWGILQTALVSPNPRKNLEGWK*RISCYL
Trigger: TAAGTAGCATGAAATCCTCAATTTCCAGCCCTCCAA...GTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCCCACCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp CTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGCTCAGAGTGACATTATaGGGACTGGAGACTGGAGAT +
Preference number: 5 (lower is better)
Translates to: LDMAFHPEEQEHVSKRWGLRVTL*GLETGD
Trigger: ATCTCCAGTCTCCAGTCCCAATAATGTCACTCTGAG...CCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp TGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTACAGAGCACCTTGAGTaGTTAATATTTGCAGGGCTA +
Preference number: 5 (lower is better)
Translates to: CSGLAKSTEKQLSRLQTSTEHLE*LIFAGL
Trigger: TAGCCCTGCAAATATTAACAACTCAAGGTGCTCTGT...AGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp CTAAAACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGAAAGGAACTCAGGTGTaGGAAAGATTGGTCTCTAGC +
Preference number: 5 (lower is better)
Translates to: LKPLYLPVSMPFRLNLAKKGTQV*ERLVSS
Trigger: GCTAGAGACCAATCTTTCCAACACCTGAGTTCCTTT...CTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGTTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp CTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCACTTTCCCAACTTCTTaGACTTTCGTGCTCCTAAAT +
Preference number: 5 (lower is better)
Translates to: LQTALVSPNPRKNSFPGSTFPTS*TFVLLN
Trigger: ATTTAGGAGCACGAAAGTCAAAGAAGTTGGGAAAGT...GGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACTTTCCCAACTTCTTaGACTTTCGTGCTCCTAAAT +
Preference number: 5 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLTFPTS*TFVLLN
Trigger: ATTTAGGAGCACGAAAGTCAAAGAAGTTGGGAAAGT...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp TCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGGGAACCAGTGCTGTGTaGACCGAGGGTTCTTTTGCA +
Preference number: 5 (lower is better)
Translates to: STEKQLSRLQTSDMTLNLGTSAV*TEGSFA
Trigger: TGCAAAAGAACCCTCGGTCAACACAGCACTGGTTCC...CAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp ACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAACAAAAATGGCTGTTCGTATGTTaGTACGATCTCCAGCTCAAG +
Preference number: 5 (lower is better)
Translates to: TCWSPTNAPSGRPRTKQKWLFVC*YDLQLK
Trigger: CTTGAGCTGGAGATCGTACAAACATACGAACAGCCA...TTTTTGTTTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp CTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGCTCTGCCCAGAATTGTaGGGACACTTAGTTACCATC +
Preference number: 5 (lower is better)
Translates to: LDMAFHPEEQEHVSKRWGLCPEL*GHLVTI
Trigger: GATGGTAACTAAGTGTCCCAACAATTCTGGGCAGAG...CCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp AAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTTTCCCCGACTCCACCTaGGGCAGCTGGTCGCTGATG +
Preference number: 5 (lower is better)
Translates to: KGFKTTEEVSVWLFTTETFPDST*GSWSLM
Trigger: CATCAGCGACCAGCTGCCCAAGGTGGAGTCGGGGAA...AGTCTCTGTTGTAAATAACCACACTGAAACCTCTTCGGTTGTCTTGAAACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATGAGAAAAGCCATACATaGCATCAGTGCCAAACAAAC +
Preference number: 5 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNEKSHT*HQCQTN
Trigger: GTTTGTTTGGCACTGATGCAATGTATGGCTTTTCTC...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp ACCCCTCTATCTCCCGGTCTCCATGCCATTCAGACTGAACCTTGCCAAGATGGGTCTGCTTACAGTCCTTaGCAAAGACAGACATATGTT +
Preference number: 5 (lower is better)
Translates to: TPLSPGLHAIQTEPCQDGSAYSP*QRQTYV
Trigger: AACATATGTCTGTCTTTGCAAAGGACTGTAAGCAGA...CCCATCTTGGCAAGGTTCAGTCTGAATGGCATGGAGACCGGGAGATAGAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS CCA 90 bp TGGGACTGGAGACTGGAGATTTTACACTGCAGTGACTTGGAGGGCTaGAAATTGAGGATTTCATGCTACTTAACGGACTTGAGAGAGGAG +
Preference number: 5 (lower is better)
Translates to: WDWRLEILHCSDLEG*KLRISCYLTDLREE
Trigger: CTCCTCTCTCAAGTCCGTTAAGTAGCATGAAATCCTCAATTTCCAGCCCTCCAAGTCACTGCAGTGTAAAATCTCCAGTCTCCAGTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp GGGAATCCTTCAGACTGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCTTGGAGGGCTGGAAATaGAGGATTTCATGCTACTTA +
Preference number: 5 (lower is better)
Translates to: GNPSDCSGLAKSTEKQLSLEGWK*RISCYL
Trigger: TAAGTAGCATGAAATCCTCAATTTCCAGCCCTCCAA...GGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCAGTCTGAAGGATTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACAGGAAAAGGGACCTCTaGAGCACCTTTCTCCTGCGT +
Preference number: 5 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNRKRDL*STFLLR
Trigger: ACGCAGGAGAAAGGTGCTCAAGAGGTCCCTTTTCCT...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp GCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGCCTGAACATGAATGCTaGGTTGATTCTTGCTTTATT +
Preference number: 5 (lower is better)
Translates to: ALVSPNPRKNSFPGSKPLPEHEC*VDSCFI
Trigger: AATAAAGCAAGAATCAACCAAGCATTCATGTTCAGG...CAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp TGCTCTGGTCTCGCCAAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTATCGTGATAAAGATATaGTACCTTGAGCACCAATCC +
Preference number: 5 (lower is better)
Translates to: CSGLAKSTEKQLSRLQTSIVIKI*YLEHQS
Trigger: GGATTGGTGCTCAAGGTACAATATCTTTATCACGAT...AGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTTGGCGAGACCAGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp ACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAACAAAAAAAAGGAACTCAGGTGTaGGAAAGATTGGTCTCTAGC +
Preference number: 5 (lower is better)
Translates to: TCWSPTNAPSGRPRTKQKKGTQV*ERLVSS
Trigger: GCTAGAGACCAATCTTTCCAACACCTGAGTTCCTTT...TTTTTGTTTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGT
48% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp ACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGATTGCCTGCTAAGCGGTaGAGCGTGGAGAGCAGATTT +
Preference number: 5 (lower is better)
Translates to: TEKQLSRLQTSDMTLNLRLPAKR*SVESRF
Trigger: AAATCTGCTCTCCACGCTCAACCGCTTAGCAGGCAA...TCTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp TTTCCCTTTCTTAAATACACTGTAAACGGTTCATTATGCATGCAGGACATTGCATTCCCCGACTCCACCTaGGGCAGCTGGTCGCTGATG +
Preference number: 5 (lower is better)
Translates to: FPFLKYTVNGSLCMQDIAFPDST*GSWSLM
Trigger: CATCAGCGACCAGCTGCCCAAGGTGGAGTCGGGGAA...TGCAATGTCCTGCATGCATAATGAACCGTTTACAGTGTATTTAAGAAAGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp ATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATTGGAGGTGGGGAATTCTGCTTACAGTCCTTaGCAAAGACAGACATATGTT +
Preference number: 5 (lower is better)
Translates to: IPRNRNMFLSAGGLEVGNSAYSP*QRQTYV
Trigger: AACATATGTCTGTCTTTGCAAAGGACTGTAAGCAGA...ATTCCCCACCTCCAATCCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS TCA 90 bp TTCATGATGGTGTATTCTTCAAAGGTGAGCTGCAGTCGAACGAACTaGAGGCTGATTTGGTGCATCCCCTGGCATAGTTCATACATGGCA +
Preference number: 5 (lower is better)
Translates to: FMMVYSSKVSCSRTN*RLIWCIPWHSSYMA
Trigger: TGCCATGTATGAACTATGCCAGGGGATGCACCAAATCAGCCTTCAGTTCGTTCGACTGCAGCTCACCTTTGAAGAATACACCATCATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp TCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGTGGACTCATGCTTCCTaGTTGGTTCTGCTGCTCATA +
Preference number: 5 (lower is better)
Translates to: STEKQLSRLQTSDMTLNLWTHAS*LVLLLI
Trigger: TATGAGCAGCAGAACCAACAAGGAAGCATGAGTCCA...CAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACACTTGGATCATCTGTTaGCCTGCTAAGCGGTTGAGC +
Preference number: 5 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNTWIIC*PAKRLS
Trigger: GCTCAACCGCTTAGCAGGCAAACAGATGATCCAAGT...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp TCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAATGCAGCCTGGCTTTaGAGGCCATCCTTTGGAATT +
Preference number: 5 (lower is better)
Translates to: STEKQLSRLQTSDMTLNLNAAWL*RPSFGI
Trigger: AATTCCAAAGGATGGCCTCAAAAGCCAGGCTGCATT...CAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp TCAGAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCCACAGCCTGAGAAACTaGACCCCACCGTCTTTCCAT +
Preference number: 5 (lower is better)
Translates to: SELLTRYGFSSRGTGTCFHSLRN*TPPSFH
Trigger: ATGGAAAGACGGTGGGGTCAAGTTTCTCAGGCTGTG...GAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAGTCAATAACTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp ACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGACTCAGAGTGACATTATaGGGACTGGAGACTGGAGAT +
Preference number: 5 (lower is better)
Translates to: TEKQLSRLQTSDMTLNLRLRVTL*GLETGD
Trigger: ATCTCCAGTCTCCAGTCCCAATAATGTCACTCTGAG...TCTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACCTCAGAGTGACATTATaGGGACTGGAGACTGGAGAT +
Preference number: 5 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNLRVTL*GLETGD
Trigger: ATCTCCAGTCTCCAGTCCCAATAATGTCACTCTGAG...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp TCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGCCCATCATCTGGTTCTaGTTTAATACCCACTGGGAA +
Preference number: 5 (lower is better)
Translates to: STEKQLSRLQTSDMTLNLPIIWF*FNTHWE
Trigger: TTCCCAGTGGGTATTAAACAAGAACCAGATGATGGG...CAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp CTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCTAAGCGCTGGGGGATCGTGATAAAGATATaGTACCTTGAGCACCAATCC +
Preference number: 5 (lower is better)
Translates to: LDMAFHPEEQEHVSKRWGIVIKI*YLEHQS
Trigger: GGATTGGTGCTCAAGGTACAATATCTTTATCACGAT...CCCCCAGCGCTTAGAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp CTGCATGCTGTGTATTTATTACCTTCAAAGTGTGGCTTTCATATTACTGTGCACCAGGAGCGATGTACGTaGTCCCTTCCTCTGGGCTTT +
Preference number: 5 (lower is better)
Translates to: LHAVYLLPSKCGFHITVHQERCT*SLPLGF
Trigger: AAAGCCCAGAGGAAGGGACAACGTACATCGCTCCTG...GTGCACAGTAATATGAAAGCCACACTTTGAAGGTAATAAATACACAGCATGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp ACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGAAATGCAGCCTGGCTTTaGAGGCCATCCTTTGGAATT +
Preference number: 5 (lower is better)
Translates to: TEKQLSRLQTSDMTLNLRNAAWL*RPSFGI
Trigger: AATTCCAAAGGATGGCCTCAAAAGCCAGGCTGCATT...TCTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACAATGCAGCCTGGCTTTaGAGGCCATCCTTTGGAATT +
Preference number: 5 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNNAAWL*RPSFGI
Trigger: AATTCCAAAGGATGGCCTCAAAAGCCAGGCTGCATT...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS TCA 90 bp TGGTTTTATGTACTGGACAATATTAAGCTGGCCAGTCACACCATTTaGGATGGCACTCTCTACTTCCTCAGTCTTAGGAAAAGGGACCTC +
Preference number: 5 (lower is better)
Translates to: WFYVLDNIKLASHTI*DGTLYFLSLRKRDL
Trigger: GAGGTCCCTTTTCCTAAGACTGAGGAAGTAGAGAGTGCCATCTCAAATGGTGTGACTGGCCAGCTTAATATTGTCCAGTACATAAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS CCA 90 bp AAAGCTCCATCTGGTTCTGGTTTTATGTACTGGACAATATTAAGCTaGCCAGTCACACCATTTGAGATGGCACTCTCTACTTCCTCAGTC +
Preference number: 5 (lower is better)
Translates to: KAPSGSGFMYWTILS*PVTPFEMALSTSSV
Trigger: GACTGAGGAAGTAGAGAGTGCCATCTCAAATGGTGTGACTGGCCAGCTTAATATTGTCCAGTACATAAAACCAGAACCAGATGGAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp TTTGGACTGGGACAGGCATTCAACAGTGAATTTAGAATATGGCTTTGCTGTTTAAGGAAAAGGGACCTCTaGAGCACCTTTCTCCTGCGT +
Preference number: 5 (lower is better)
Translates to: FGLGQAFNSEFRIWLCCLRKRDL*STFLLR
Trigger: ACGCAGGAGAAAGGTGCTCAAGAGGTCCCTTTTCCT...TAAACAGCAAAGCCATATTCTAAATTCACTGTTGAATGCCTGTCCCAGTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp AACCTCTGCCAGCTCTGCCCAGAATTGTTGGGACACTTAGTTACCATCTTCCTCCCTGAACATGAATGCTaGGTTGATTCTTGCTTTATT +
Preference number: 5 (lower is better)
Translates to: NLCQLCPELLGHLVTIFLPEHEC*VDSCFI
Trigger: AATAAAGCAAGAATCAACCAAGCATTCATGTTCAGG...GAGGAAGATGGTAACTAAGTGTCCCAACAATTCTGGGCAGAGCTGGCAGAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342437.8
CDS-3UTR CAA 90 bp ACGTGCTGGAGTCCCACAAATGCCCCAAGCGGGAGACCAAGAACAAAACAAAAACCTGAACATGAATGCTaGGTTGATTCTTGCTTTATT +
Preference number: 5 (lower is better)
Translates to: TCWSPTNAPSGRPRTKQKPEHEC*VDSCFI
Trigger: AATAAAGCAAGAATCAACCAAGCATTCATGTTCAGG...TTTTTGTTTTGTTCTTGGTCTCCCGCTTGGGGCATTTGTGGGACTCCAGCACGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACCCCATCATCTGGTTCTaGTTTAATACCCACTGGGAA +
Preference number: 5 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNPIIWF*FNTHWE
Trigger: TTCCCAGTGGGTATTAAACAAGAACCAGATGATGGG...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp ACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGACCCATCATCTGGTTCTaGTTTAATACCCACTGGGAA +
Preference number: 5 (lower is better)
Translates to: TEKQLSRLQTSDMTLNLRPIIWF*FNTHWE
Trigger: TTCCCAGTGGGTATTAAACAAGAACCAGATGATGGG...TCTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACAAAGGAACTCAGGTGTaGGAAAGATTGGTCTCTAGC +
Preference number: 5 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNKGTQV*ERLVSS
Trigger: GCTAGAGACCAATCTTTCCAACACCTGAGTTCCTTT...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp ACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGAGACTCCACTAAAGTATaGACAGGAGGAAAGGAACTC +
Preference number: 5 (lower is better)
Translates to: TEKQLSRLQTSDMTLNLRDSTKV*TGGKEL
Trigger: GAGTTCCTTTCCTCCTGTCAATACTTTAGTGGAGTC...TCTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp CTGCATGCTGTGTATTTATTACCTTCAAAGTGTGGCTTTCATATTACTGTGCACTGCCCACTTCACGACTaGGATCATCTGTTTGCCTGC +
Preference number: 5 (lower is better)
Translates to: LHAVYLLPSKCGFHITVHCPLHD*DHLFAC
Trigger: GCAGGCAAACAGATGATCCAAGTCGTGAAGTGGGCA...GTGCACAGTAATATGAAAGCCACACTTTGAAGGTAATAAATACACAGCATGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp ACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGAGAGGCCATCCTTTGGAATaGTGCTTAGTAGCAGCAAAA +
Preference number: 5 (lower is better)
Translates to: TEKQLSRLQTSDMTLNLRGHPLE*CLVAAK
Trigger: TTTTGCTGCTACTAAGCACAATTCCAAAGGATGGCC...TCTCAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTCAGCTCTGCCCAGAATaGTTGGGACACTTAGTTACC +
Preference number: 5 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVQLCPE*LGHLVT
Trigger: GGTAACTAAGTGTCCCAACAATTCTGGGCAGAGCTG...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTCCTCTCCCACATGTGTaGTCAAATGACACCTTCCAG +
Preference number: 5 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVPLPHV*SNDTFQ
Trigger: CTGGAAGGTGTCATTTGACAACACATGTGGGAGAGG...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp AGAATATTAATGCCCCATATTGACTATACGTTTTATGTGCAAACCAAGGGTAAGGTGGAGGACACAGAGTaGATTCCAGCAGGGCTGCAA +
Preference number: 5 (lower is better)
Translates to: RILMPHIDYTFYVQTKGKVEDTE*IPAGLQ
Trigger: TTGCAGCCCTGCTGGAATCAACTCTGTGTCCTCCAC...CTTACCCTTGGTTTGCACATAAAACGTATAGTCAATATGGGGCATTAATATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACACAGAGCACCTTGAGTaGTTAATATTTGCAGGGCTA +
Preference number: 5 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNTEHLE*LIFAGL
Trigger: TAGCCCTGCAAATATTAACAACTCAAGGTGCTCTGT...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp TTTGGACTGGGACAGGCATTCAACAGTGAATTTAGAATATGGCTTTGCTGTTTACGGCTGTATCTGGTTTaGAGCTGTCATAGCCTGCAT +
Preference number: 5 (lower is better)
Translates to: FGLGQAFNSEFRIWLCCLRLYLV*SCHSLH
Trigger: ATGCAGGCTATGACAGCTCAAAACCAGATACAGCCG...TAAACAGCAAAGCCATATTCTAAATTCACTGTTGAATGCCTGTCCCAGTCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTAATGCAGCCTGGCTTTaGAGGCCATCCTTTGGAATT +
Preference number: 5 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVNAAWL*RPSFGI
Trigger: AATTCCAAAGGATGGCCTCAAAAGCCAGGCTGCATT...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTCTCTGCCCAGAATTGTaGGGACACTTAGTTACCATC +
Preference number: 5 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVLCPEL*GHLVTI
Trigger: GATGGTAACTAAGTGTCCCAACAATTCTGGGCAGAG...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACGAGAAAAGCCATACATaGCATCAGTGCCAAACAAAC +
Preference number: 5 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNEKSHT*HQCQTN
Trigger: GTTTGTTTGGCACTGATGCAATGTATGGCTTTTCTC...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp TCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTTGACTGTGCACCGTAAGTaGACTGTATTTAAAGATCTG +
Preference number: 5 (lower is better)
Translates to: STEKQLSRLQTSDMTLNLTVHRK*TVFKDL
Trigger: CAGATCTTTAAATACAGTCAACTTACGGTGCACAGT...CAAGTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS CCA 90 bp CATGACTCCACTAAAGTATTGACAGGAGGAAAGGAACTCAGGTGTTaGAAAGATTGGTCTCTAGCCGATCGTGATAAAGATATTGTACCT +
Preference number: 5 (lower is better)
Translates to: HDSTKVLTGGKELRC*KDWSLADRDKDIVP
Trigger: AGGTACAATATCTTTATCACGATCGGCTAGAGACCAATCTTTCCAACACCTGAGTTCCTTTCCTCCTGTCAATACTTTAGTGGAGTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp TCCTTGAACCCTTTTAAAACAAGCGAACGATACCAGAAACTACACGGCATAGTTCCCATCATCTGGTTCTaGTTTAATACCCACTGGGAA +
Preference number: 5 (lower is better)
Translates to: SLNPFKTSERYQKLHGIVPIIWF*FNTHWE
Trigger: TTCCCAGTGGGTATTAAACAAGAACCAGATGATGGG...AACTATGCCGTGTAGTTTCTGGTATCGTTCGCTTGTTTTAAAAGGGTTCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp TTTCCCTTTCTTAAATACACTGTAAACGGTTCATTATGCATGCAGGACATTGCACGGCTGTATCTGGTTTaGAGCTGTCATAGCCTGCAT +
Preference number: 5 (lower is better)
Translates to: FPFLKYTVNGSLCMQDIARLYLV*SCHSLH
Trigger: ATGCAGGCTATGACAGCTCAAAACCAGATACAGCCG...TGCAATGTCCTGCATGCATAATGAACCGTTTACAGTGTATTTAAGAAAGGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACTCTGCTTACAGTCCTTaGCAAAGACAGACATATGTT +
Preference number: 5 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNSAYSP*QRQTYV
Trigger: AACATATGTCTGTCTTTGCAAAGGACTGTAAGCAGA...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp TTTCCCTTTCTTAAATACACTGTAAACGGTTCATTATGCATGCAGGACATTGCACTCAGAGTGACATTATaGGGACTGGAGACTGGAGAT +
Preference number: 5 (lower is better)
Translates to: FPFLKYTVNGSLCMQDIALRVTL*GLETGD
Trigger: ATCTCCAGTCTCCAGTCCCAATAATGTCACTCTGAG...TGCAATGTCCTGCATGCATAATGAACCGTTTACAGTGTATTTAAGAAAGGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp TCAGAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCACAGAGCACCTTGAGTaGTTAATATTTGCAGGGCTA +
Preference number: 5 (lower is better)
Translates to: SELLTRYGFSSRGTGTCFTEHLE*LIFAGL
Trigger: TAGCCCTGCAAATATTAACAACTCAAGGTGCTCTGT...GAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAGTCAATAACTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp AAATCCACGGAAAAACAGCTTTCCCGGCTCCAAACCTCTGACATGACTTTAAACCCTGAACATGAATGCTaGGTTGATTCTTGCTTTATT +
Preference number: 5 (lower is better)
Translates to: KSTEKQLSRLQTSDMTLNPEHEC*VDSCFI
Trigger: AATAAAGCAAGAATCAACCAAGCATTCATGTTCAGG...GTTTAAAGTCATGTCAGAGGTTTGGAGCCGGGAAAGCTGTTTTTCCGTGGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp CTGCATGCTGTGTATTTATTACCTTCAAAGTGTGGCTTTCATATTACTGTGCACGACTCCACTAAAGTATaGACAGGAGGAAAGGAACTC +
Preference number: 5 (lower is better)
Translates to: LHAVYLLPSKCGFHITVHDSTKV*TGGKEL
Trigger: GAGTTCCTTTCCTCCTGTCAATACTTTAGTGGAGTC...GTGCACAGTAATATGAAAGCCACACTTTGAAGGTAATAAATACACAGCATGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp AAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTGGCCATCCTTTGGAATaGTGCTTAGTAGCAGCAAAA +
Preference number: 5 (lower is better)
Translates to: KGFKTTEEVSVWLFTTETGHPLE*CLVAAK
Trigger: TTTTGCTGCTACTAAGCACAATTCCAAAGGATGGCC...AGTCTCTGTTGTAAATAACCACACTGAAACCTCTTCGGTTGTCTTGAAACCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS GCA 90 bp GGGTTTACTGTTGGATTCCCTTTAAAAGAGGTGCCTGAACATGAATaGTTGGTTGATTCTTGCTTTATTGGTACTGAGAATGAAGAATCC +
Preference number: 5 (lower is better)
Translates to: GFTVGFPLKEVPEHE*LVDSCFIGTENEES
Trigger: GGATTCTTCATTCTCAGTACCAATAAAGCAAGAATCAACCAAGCATTCATGTTCAGGCACCTCTTTTAAAGGGAATCCAACAGTAAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp TTTGGACTGGGACAGGCATTCAACAGTGAATTTAGAATATGGCTTTGCTGTTTATTGGAGGGCTGGAAATaGAGGATTTCATGCTACTTA +
Preference number: 5 (lower is better)
Translates to: FGLGQAFNSEFRIWLCCLLEGWK*RISCYL
Trigger: TAAGTAGCATGAAATCCTCAATTTCCAGCCCTCCAA...TAAACAGCAAAGCCATATTCTAAATTCACTGTTGAATGCCTGTCCCAGTCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp AAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTACAGAGCACCTTGAGTaGTTAATATTTGCAGGGCTA +
Preference number: 5 (lower is better)
Translates to: KGFKTTEEVSVWLFTTETTEHLE*LIFAGL
Trigger: TAGCCCTGCAAATATTAACAACTCAAGGTGCTCTGT...AGTCTCTGTTGTAAATAACCACACTGAAACCTCTTCGGTTGTCTTGAAACCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp TTTCCCTTTCTTAAATACACTGTAAACGGTTCATTATGCATGCAGGACATTGCAGGCCATCCTTTGGAATaGTGCTTAGTAGCAGCAAAA +
Preference number: 5 (lower is better)
Translates to: FPFLKYTVNGSLCMQDIAGHPLE*CLVAAK
Trigger: TTTTGCTGCTACTAAGCACAATTCCAAAGGATGGCC...TGCAATGTCCTGCATGCATAATGAACCGTTTACAGTGTATTTAAGAAAGGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp AGAATATTAATGCCCCATATTGACTATACGTTTTATGTGCAAACCAAGGGTAAGAATGCAGCCTGGCTTTaGAGGCCATCCTTTGGAATT +
Preference number: 5 (lower is better)
Translates to: RILMPHIDYTFYVQTKGKNAAWL*RPSFGI
Trigger: AATTCCAAAGGATGGCCTCAAAAGCCAGGCTGCATT...CTTACCCTTGGTTTGCACATAAAACGTATAGTCAATATGGGGCATTAATATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp TCAGAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCACATATGTTTGTGATTaGGGGCAAGAGAAAAGCCAT +
Preference number: 5 (lower is better)
Translates to: SELLTRYGFSSRGTGTCFTYVCD*GQEKSH
Trigger: ATGGCTTTTCTCTTGCCCCAAATCACAAACATATGT...GAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAGTCAATAACTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp TCAGAGTTATTGACTAGATATGGCTTTTCATCCCGAGGAACAGGAACATGTTTCCCTGAACATGAATGCTaGGTTGATTCTTGCTTTATT +
Preference number: 5 (lower is better)
Translates to: SELLTRYGFSSRGTGTCFPEHEC*VDSCFI
Trigger: AATAAAGCAAGAATCAACCAAGCATTCATGTTCAGG...GAAACATGTTCCTGTTCCTCGGGATGAAAAGCCATATCTAGTCAATAACTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp TTTGGACTGGGACAGGCATTCAACAGTGAATTTAGAATATGGCTTTGCTGTTTAATCGTGATAAAGATATaGTACCTTGAGCACCAATCC +
Preference number: 5 (lower is better)
Translates to: FGLGQAFNSEFRIWLCCLIVIKI*YLEHQS
Trigger: GGATTGGTGCTCAAGGTACAATATCTTTATCACGAT...TAAACAGCAAAGCCATATTCTAAATTCACTGTTGAATGCCTGTCCCAGTCCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp AAAGGTTTCAAGACAACCGAAGAGGTTTCAGTGTGGTTATTTACAACAGAGACTATCGTGATAAAGATATaGTACCTTGAGCACCAATCC +
Preference number: 5 (lower is better)
Translates to: KGFKTTEEVSVWLFTTETIVIKI*YLEHQS
Trigger: GGATTGGTGCTCAAGGTACAATATCTTTATCACGAT...AGTCTCTGTTGTAAATAACCACACTGAAACCTCTTCGGTTGTCTTGAAACCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000512865.5
ENST00000625323.2
CDS-3UTR CAA 90 bp CTGCATGCTGTGTATTTATTACCTTCAAAGTGTGGCTTTCATATTACTGTGCACACATATGTTTGTGATTaGGGGCAAGAGAAAAGCCAT +
Preference number: 5 (lower is better)
Translates to: LHAVYLLPSKCGFHITVHTYVCD*GQEKSH
Trigger: ATGGCTTTTCTCTTGCCCCAAATCACAAACATATGT...GTGCACAGTAATATGAAAGCCACACTTTGAAGGTAATAAATACACAGCATGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS-3UTR CAA 90 bp TTTCCCTTTCTTAAATACACTGTAAACGGTTCATTATGCATGCAGGACATTGCAACTTTCCCAACTTCTTaGACTTTCGTGCTCCTAAAT +
Preference number: 5 (lower is better)
Translates to: FPFLKYTVNGSLCMQDIATFPTS*TFVLLN
Trigger: ATTTAGGAGCACGAAAGTCAAAGAAGTTGGGAAAGT...TGCAATGTCCTGCATGCATAATGAACCGTTTACAGTGTATTTAAGAAAGGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000625323.2
CDS TCA 72 bp AGCAGCCTGAAGTTGGCTCCCGTCTCCCGGGCCCAATaGCACCCCGGGCGCGGAGGGGCTGAGAGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: SSLKLAPVSRAQ*HPGRGGAERRG
Trigger: CCCCCTCCTCTCAGCCCCTCCGCGCCCGGGGTGTCATTGGGCCCGGGAGACGGGAGCCAACTTCAGGCTGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625323.2
CDS CAA 90 bp CTCCATCGCTGCCTCGGCCGGGGTCCGTCTCTCGCCGTCTACCTGTaGCAGCGCTTGCCACCGCCACGAAACCCCTGCTGCGGAGCCCCC +
Preference number: 6 (lower is better)
Translates to: LHRCLGRGPSLAVYL*QRLPPPRNPCCGAP
Trigger: GGGGGCTCCGCAGCAGGGGTTTCGTGGCGGTGGCAAGCGCTGCAACAGGTAGACGGCGAGAGACGGACCCCGGCCGAGGCAGCGATGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342437.8
ENST00000358102.8
ENST00000625323.2
CDS GCA 72 bp GCCTCGGCCGGGGTCCGTCTCTCGCCGTCTACCTGTTaGAGCGCTTGCCACCGCCACGAAACCCCTGCTGCG +
Preference number: 6 (lower is better)
Translates to: ASAGVRLSPSTC*SACHRHETPAA
Trigger: CGCAGCAGGGGTTTCGTGGCGGTGGCAAGCGCTGCAACAGGTAGACGGCGAGAGACGGACCCCGGCCGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342437.8
ENST00000358102.8
ENST00000625323.2
CDS CAA 72 bp CGGGGTCCGTCTCTCGCCGTCTACCTGTTGCAGCGCTaGCCACCGCCACGAAACCCCTGCTGCGGAGCCCCC +
Preference number: 6 (lower is better)
Translates to: RGPSLAVYLLQR*PPPRNPCCGAP
Trigger: GGGGGCTCCGCAGCAGGGGTTTCGTGGCGGTGGCAAGCGCTGCAACAGGTAGACGGCGAGAGACGGACCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342437.8
ENST00000358102.8
ENST00000625323.2
CDS GCA 72 bp GCGGGGGAAGGGGAACGGCTAGACTCCCGCCGCCGCTaGTGCCGCCGCCACCAGCAAGTCCAATATTGGCTG +
Preference number: 6 (lower is better)
Translates to: AGEGERLDSRRR*CRRHQQVQYWL
Trigger: CAGCCAATATTGGACTTGCTGGTGGCGGCGGCAGCAGCGGCGGCGGGAGTCTAGCCGTTCCCCTTCCCCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344721.8
CDS CAA 72 bp TGCCTCGGCCGGGGTCCGTCTCTCGCCGTCTACCTGTaGCAGCGCTTGCCACCGCCACGAAACCCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: CLGRGPSLAVYL*QRLPPPRNPCC
Trigger: GCAGCAGGGGTTTCGTGGCGGTGGCAAGCGCTGCAACAGGTAGACGGCGAGAGACGGACCCCGGCCGAGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342437.8
ENST00000358102.8
ENST00000625323.2
CDS GCA 72 bp GGGGAAGGGGAACGGCTAGACTCCCGCCGCCGCTGCTaGCGCCGCCACCAGCAAGTCCAATATTGGCTGATC +
Preference number: 6 (lower is better)
Translates to: GEGERLDSRRRC*RRHQQVQYWLI
Trigger: GATCAGCCAATATTGGACTTGCTGGTGGCGGCGGCAGCAGCGGCGGCGGGAGTCTAGCCGTTCCCCTTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344721.8
CDS GCA 72 bp TCCAACCACATCCAGGCCAGCGAGTGCCGCTCTCCCTaGAGCGGGAGAGCCCGAGGCAGCAACGCTCTTGCA +
Preference number: 6 (lower is better)
Translates to: SNHIQASECRSP*SGRARGSNALA
Trigger: TGCAAGAGCGTTGCTGCCTCGGGCTCTCCCGCTGCAGGGAGAGCGGCACTCGCTGGCCTGGATGTGGTTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342437.8
ENST00000358102.8
ENST00000625323.2
CDS GCA 72 bp CCCCGTCAGTGGTGTAGGGGGCACTCCATAGGAAACTaGGGCCTCTATGGCAGGCACTTAGGGCCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: PRQWCRGHSIGN*GLYGRHLGPWA
Trigger: GGCCCAGGGCCCTAAGTGCCTGCCATAGAGGCCGCAGTTTCCTATGGAGTGCCCCCTACACCACTGACGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503313.1
CDS TCA 72 bp GAGCCCGAGGCAGCAACGCTCTTGCACCCAGGTGACTaGCTGCACGGGCTTCCTCTGAGCAGCCTGAAGTTG +
Preference number: 6 (lower is better)
Translates to: EPEAATLLHPGD*LHGLPLSSLKL
Trigger: CAACTTCAGGCTGCTCAGAGGAAGCCCGTGCAGTCAGTCACCTGGGTGCAAGAGCGTTGCTGCCTCGGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342437.8
ENST00000358102.8
ENST00000625323.2
CDS TCA 72 bp GCTGCTGCCGCCGCCACCAGCAAGTCCAATATTGGCTaGTCGGCGGTGAGGATGGAGAGGATGATAATCCCG +
Preference number: 6 (lower is better)
Translates to: AAAAATSKSNIG*SAVRMERMIIP
Trigger: CGGGATTATCATCCTCTCCATCCTCACCGCCGATCAGCCAATATTGGACTTGCTGGTGGCGGCGGCAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344721.8
CDS CCA 72 bp CGCCGCTGCTGCCGCCGCCACCAGCAAGTCCAATATTaGCTGATCGGCGGTGAGGATGGAGAGGATGATAAT +
Preference number: 6 (lower is better)
Translates to: RRCCRRHQQVQY*LIGGEDGEDDN
Trigger: ATTATCATCCTCTCCATCCTCACCGCCGATCAGCCAATATTGGACTTGCTGGTGGCGGCGGCAGCAGCGGCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344721.8
CDS GCA 72 bp GAGCATGTCAGAGGAGTTCCCTGGGTGATTGGGCTGTaGACTGGAAAACTGCCAAAGCTGGCTGTGGTGGAG +
Preference number: 6 (lower is better)
Translates to: EHVRGVPWVIGL*TGKLPKLAVVE
Trigger: CTCCACCACAGCCAGCTTTGGCAGTTTTCCAGTGCACAGCCCAATCACCCAGGGAACTCCTCTGACATGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS CCA 72 bp TGTCAGAGGAGTTCCCTGGGTGATTGGGCTGTGCACTaGAAAACTGCCAAAGCTGGCTGTGGTGGAGGACAC +
Preference number: 6 (lower is better)
Translates to: CQRSSLGDWAVH*KTAKAGCGGGH
Trigger: GTGTCCTCCACCACAGCCAGCTTTGGCAGTTTTCCAGTGCACAGCCCAATCACCCAGGGAACTCCTCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS CCA 72 bp GGACCTCTTGAGCACCTTTCTCCTGCGTGTCTGGACTaGGAACCACATCCCGCAATGTACTGGATCCAGCAG +
Preference number: 6 (lower is better)
Translates to: GPLEHLSPACLD*EPHPAMYWIQQ
Trigger: CTGCTGGATCCAGTACATTGCGGGATGTGGTTCCCAGTCCAGACACGCAGGAGAAAGGTGCTCAAGAGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS TCA 72 bp GGGGAAGGTGTGAGCGCTCGTGAGATTGTGGAGAGCTaGGGAACCAGTGCTGTGTTGACCGAGGGTTCTTTT +
Preference number: 6 (lower is better)
Translates to: GEGVSAREIVES*GTSAVLTEGSF
Trigger: AAAAGAACCCTCGGTCAACACAGCACTGGTTCCTCAGCTCTCCACAATCTCACGAGCGCTCACACCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000503174.1
ENST00000503313.1
ENST00000511528.1
ENST00000625323.2
CDS GCA 72 bp CTGAGGAACCAGTGCTGTGTTGACCGAGGGTTCTTTTaGAGGAGCGATGTACGTTGTCCCTTCCTCTGGGCT +
Preference number: 6 (lower is better)
Translates to: LRNQCCVDRGFF*RSDVRCPFLWA
Trigger: AGCCCAGAGGAAGGGACAACGTACATCGCTCCTGCAAAAGAACCCTCGGTCAACACAGCACTGGTTCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000503174.1
ENST00000503313.1
ENST00000511528.1
ENST00000625323.2
CDS CAA 72 bp ATGCTACTTAACGGACTTGAGAGAGGAGAGCCCACATaGCTAGCATGTGCAGGGCTGTGCGACCTGGAGCCT +
Preference number: 6 (lower is better)
Translates to: MLLNGLERGEPT*LACAGLCDLEP
Trigger: AGGCTCCAGGTCGCACAGCCCTGCACATGCTAGCAATGTGGGCTCTCCTCTCTCAAGTCCGTTAAGTAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS TCA 72 bp TTCAAGGACCATAACGGGGGAAGGTGTGAGCGCTCGTaGGATTGTGGAGAGCTGAGGAACCAGTGCTGTGTT +
Preference number: 6 (lower is better)
Translates to: FKDHNGGRCERS*DCGELRNQCCV
Trigger: AACACAGCACTGGTTCCTCAGCTCTCCACAATCTCACGAGCGCTCACACCTTCCCCCGTTATGGTCCTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000503174.1
ENST00000503313.1
ENST00000511528.1
ENST00000625323.2
CDS CCA 72 bp ATTAGGGGAGCATGTCAGAGGAGTTCCCTGGGTGATTaGGCTGTGCACTGGAAAACTGCCAAAGCTGGCTGT +
Preference number: 6 (lower is better)
Translates to: IRGACQRSSLGD*AVHWKTAKAGC
Trigger: ACAGCCAGCTTTGGCAGTTTTCCAGTGCACAGCCCAATCACCCAGGGAACTCCTCTGACATGCTCCCCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS CCA 72 bp AGCTGCCCTCACACAACTAGTGCTTCAGACGCAAGATaGTGTGGGTGGAAGTCACCTTCATCCCAGAGAGAC +
Preference number: 6 (lower is better)
Translates to: SCPHTTSASDAR*CGWKSPSSQRD
Trigger: GTCTCTCTGGGATGAAGGTGACTTCCACCCACACCATCTTGCGTCTGAAGCACTAGTTGTGTGAGGGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503313.1
CDS CAA 90 bp TGCACTGGAAAACTGCCAAAGCTGGCTGTGGTGGAGGACACAGAGTaGATTCCAGCAGGGCTGCAAACCGAAGATGTCATGTTCAGAGGG +
Preference number: 6 (lower is better)
Translates to: CTGKLPKLAVVEDTE*IPAGLQTEDVMFRG
Trigger: CCCTCTGAACATGACATCTTCGGTTTGCAGCCCTGCTGGAATCAACTCTGTGTCCTCCACCACAGCCAGCTTTGGCAGTTTTCCAGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS TCA 72 bp AACTGCCAAAGCTGGCTGTGGTGGAGGACACAGAGTTaGTTCCAGCAGGGCTGCAAACCGAAGATGTCATGT +
Preference number: 6 (lower is better)
Translates to: NCQSWLWWRTQS*FQQGCKPKMSC
Trigger: ACATGACATCTTCGGTTTGCAGCCCTGCTGGAATCAACTCTGTGTCCTCCACCACAGCCAGCTTTGGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS TCA 72 bp CTCTCTACTTCCTCAGTCTTAGGAAAAGGGACCTCTTaGGCACCTTTCTCCTGCGTGTCTGGACTGGGAACC +
Preference number: 6 (lower is better)
Translates to: LSTSSVLGKGTS*APFSCVSGLGT
Trigger: GGTTCCCAGTCCAGACACGCAGGAGAAAGGTGCTCAAGAGGTCCCTTTTCCTAAGACTGAGGAAGTAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS TCA 72 bp GTGAGATTGTGGAGAGCTGAGGAACCAGTGCTGTGTTaGCCGAGGGTTCTTTTGCAGGAGCGATGTACGTTG +
Preference number: 6 (lower is better)
Translates to: VRLWRAEEPVLC*PRVLLQERCTL
Trigger: CAACGTACATCGCTCCTGCAAAAGAACCCTCGGTCAACACAGCACTGGTTCCTCAGCTCTCCACAATCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000503174.1
ENST00000503313.1
ENST00000511528.1
ENST00000625323.2
CDS CCA 72 bp AGGGATGCTGGCCTCTGGGTAATAGCTCCCATCATCTaGTTCTTGTTTAATACCCACTGGGAATCCGCTGCC +
Preference number: 6 (lower is better)
Translates to: RDAGLWVIAPII*FLFNTHWESAA
Trigger: GGCAGCGGATTCCCAGTGGGTATTAAACAAGAACCAGATGATGGGAGCTATTACCCAGAGGCCAGCATCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS CAA 72 bp AAACTGCCAAAGCTGGCTGTGGTGGAGGACACAGAGTaGATTCCAGCAGGGCTGCAAACCGAAGATGTCATG +
Preference number: 6 (lower is better)
Translates to: KLPKLAVVEDTE*IPAGLQTEDVM
Trigger: CATGACATCTTCGGTTTGCAGCCCTGCTGGAATCAACTCTGTGTCCTCCACCACAGCCAGCTTTGGCAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS CAA 90 bp GAGGATTTCATGCTACTTAACGGACTTGAGAGAGGAGAGCCCACATaGCTAGCATGTGCAGGGCTGTGCGACCTGGAGCCTCGATTTTCA +
Preference number: 6 (lower is better)
Translates to: EDFMLLNGLERGEPT*LACAGLCDLEPRFS
Trigger: TGAAAATCGAGGCTCCAGGTCGCACAGCCCTGCACATGCTAGCAATGTGGGCTCTCCTCTCTCAAGTCCGTTAAGTAGCATGAAATCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS CAA 90 bp GGAAGGGATGCTGGCCTCTGGGTAATAGCTCCCATCATCTGGTTCTaGTTTAATACCCACTGGGAATCCGCTGCCTTCACAGTTACCATC +
Preference number: 6 (lower is better)
Translates to: GRDAGLWVIAPIIWF*FNTHWESAAFTVTI
Trigger: GATGGTAACTGTGAAGGCAGCGGATTCCCAGTGGGTATTAAACAAGAACCAGATGATGGGAGCTATTACCCAGAGGCCAGCATCCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS CAA 72 bp GCTGGCCTCTGGGTAATAGCTCCCATCATCTGGTTCTaGTTTAATACCCACTGGGAATCCGCTGCCTTCACA +
Preference number: 6 (lower is better)
Translates to: AGLWVIAPIIWF*FNTHWESAAFT
Trigger: TGTGAAGGCAGCGGATTCCCAGTGGGTATTAAACAAGAACCAGATGATGGGAGCTATTACCCAGAGGCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS CAA 90 bp TTTGCCCACTTCACGACTTGGATCATCTGTTTGCCTGCTAAGCGGTaGAGCGTGGAGAGCAGATTTTCGGCTGTATCTGGTTTTGAGCTG +
Preference number: 6 (lower is better)
Translates to: FAHFTTWIICLPAKR*SVESRFSAVSGFEL
Trigger: CAGCTCAAAACCAGATACAGCCGAAAATCTGCTCTCCACGCTCAACCGCTTAGCAGGCAAACAGATGATCCAAGTCGTGAAGTGGGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000503174.1
ENST00000503313.1
ENST00000511528.1
ENST00000625323.2
CDS CAA 90 bp AATCCTGGAAGTACCTTTGCCCACTTCACGACTTGGATCATCTGTTaGCCTGCTAAGCGGTTGAGCGTGGAGAGCAGATTTTCGGCTGTA +
Preference number: 6 (lower is better)
Translates to: NPGSTFAHFTTWIIC*PAKRLSVESRFSAV
Trigger: TACAGCCGAAAATCTGCTCTCCACGCTCAACCGCTTAGCAGGCAAACAGATGATCCAAGTCGTGAAGTGGGCAAAGGTACTTCCAGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000503174.1
ENST00000503313.1
ENST00000511528.1
ENST00000625323.2
CDS TCA 72 bp ATGTTCAGAGGGCTGCAAACAGACGGGCTTTTCTCATaGCACATGATAGGGCTTTTAACAACGGCGCGCATG +
Preference number: 6 (lower is better)
Translates to: MFRGLQTDGLFS*HMIGLLTTARM
Trigger: CATGCGCGCCGTTGTTAAAAGCCCTATCATGTGTCATGAGAAAAGCCCGTCTGTTTGCAGCCCTCTGAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS TCA 72 bp TTGAGCACCAATCCTGTAGTGGAAGGACTGTCCACCTaGATTCACCCCAACAATAGCAGAGGAAGGGATGCT +
Preference number: 6 (lower is better)
Translates to: LSTNPVVEGLST*IHPNNSRGRDA
Trigger: AGCATCCCTTCCTCTGCTATTGTTGGGGTGAATTCAGGTGGACAGTCCTTCCACTACAGGATTGGTGCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS TCA 72 bp TCACGACTTGGATCATCTGTTTGCCTGCTAAGCGGTTaGGCGTGGAGAGCAGATTTTCGGCTGTATCTGGTT +
Preference number: 6 (lower is better)
Translates to: SRLGSSVCLLSG*AWRADFRLYLV
Trigger: AACCAGATACAGCCGAAAATCTGCTCTCCACGCTCAACCGCTTAGCAGGCAAACAGATGATCCAAGTCGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000503174.1
ENST00000503313.1
ENST00000511528.1
ENST00000625323.2
CDS TCA 72 bp TCCCAGAGAGACACTCAGAGAATCCACAGAGGCATGTaGAGTGCCACTAAGACTTCAACCCTCTCTCACTCT +
Preference number: 6 (lower is better)
Translates to: SQRDTQRIHRGM*SATKTSTLSHS
Trigger: AGAGTGAGAGAGGGTTGAAGTCTTAGTGGCACTTCACATGCCTCTGTGGATTCTCTGAGTGTCTCTCTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503313.1
CDS CAA 72 bp TTCACGACTTGGATCATCTGTTTGCCTGCTAAGCGGTaGAGCGTGGAGAGCAGATTTTCGGCTGTATCTGGT +
Preference number: 6 (lower is better)
Translates to: FTTWIICLPAKR*SVESRFSAVSG
Trigger: ACCAGATACAGCCGAAAATCTGCTCTCCACGCTCAACCGCTTAGCAGGCAAACAGATGATCCAAGTCGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000503174.1
ENST00000503313.1
ENST00000511528.1
ENST00000625323.2
CDS CAA 72 bp AGTACCTTTGCCCACTTCACGACTTGGATCATCTGTTaGCCTGCTAAGCGGTTGAGCGTGGAGAGCAGATTT +
Preference number: 6 (lower is better)
Translates to: STFAHFTTWIIC*PAKRLSVESRF
Trigger: AAATCTGCTCTCCACGCTCAACCGCTTAGCAGGCAAACAGATGATCCAAGTCGTGAAGTGGGCAAAGGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000503174.1
ENST00000503313.1
ENST00000511528.1
ENST00000625323.2
CDS TCA 72 bp GTGTATTCTTCAAAGGTGAGCTGCAGTCGAACGAACTaGAGGCTGATTTGGTGCATCCCCTGGCATAGTTCA +
Preference number: 6 (lower is better)
Translates to: VYSSKVSCSRTN*RLIWCIPWHSS
Trigger: TGAACTATGCCAGGGGATGCACCAAATCAGCCTTCAGTTCGTTCGACTGCAGCTCACCTTTGAAGAATACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS GCA 72 bp TGCAGTGACTTGGAGGGCTGGAAATTGAGGATTTCATaGTACTTAACGGACTTGAGAGAGGAGAGCCCACAT +
Preference number: 6 (lower is better)
Translates to: CSDLEGWKLRIS*YLTDLREESPH
Trigger: ATGTGGGCTCTCCTCTCTCAAGTCCGTTAAGTAGCATGAAATCCTCAATTTCCAGCCCTCCAAGTCACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS GCA 72 bp GTTTACAGGGCTACAGATAGATCCCACAGTACTGGCTaGCGGACTGGAAAGCGTGGATCTGTTATTAGTGTT +
Preference number: 6 (lower is better)
Translates to: VYRATDRSHSTG*RTGKRGSVISV
Trigger: AACACTAATAACAGATCCACGCTTTCCAGTCCGGCAGCCAGTACTGTGGGATCTATCTGTAGCCCTGTAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS CCA 72 bp AGAGGATCTCAGAGTGACATTATTGGGACTGGAGACTaGAGATTTTACACTGCAGTGACTTGGAGGGCTGGA +
Preference number: 6 (lower is better)
Translates to: RGSQSDIIGTGD*RFYTAVTWRAG
Trigger: TCCAGCCCTCCAAGTCACTGCAGTGTAAAATCTCCAGTCTCCAGTCCCAATAATGTCACTCTGAGATCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS CCA 72 bp CACCCCAACAATAGCAGAGGAAGGGATGCTGGCCTCTaGGTAATAGCTCCCATCATCTGGTTCTTGTTTAAT +
Preference number: 6 (lower is better)
Translates to: HPNNSRGRDAGL*VIAPIIWFLFN
Trigger: ATTAAACAAGAACCAGATGATGGGAGCTATTACCCAGAGGCCAGCATCCCTTCCTCTGCTATTGTTGGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS CAA 90 bp TGGAGACTGGAGATTTTACACTGCAGTGACTTGGAGGGCTGGAAATaGAGGATTTCATGCTACTTAACGGACTTGAGAGAGGAGAGCCCA +
Preference number: 6 (lower is better)
Translates to: WRLEILHCSDLEGWK*RISCYLTDLREESP
Trigger: TGGGCTCTCCTCTCTCAAGTCCGTTAAGTAGCATGAAATCCTCAATTTCCAGCCCTCCAAGTCACTGCAGTGTAAAATCTCCAGTCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS CAA 90 bp CTAGACGACAGGTCGCCGTGTGATTTCCATGACTCCACTAAAGTATaGACAGGAGGAAAGGAACTCAGGTGTTGGAAAGATTGGTCTCTA +
Preference number: 6 (lower is better)
Translates to: LDDRSPCDFHDSTKV*TGGKELRCWKDWSL
Trigger: TAGAGACCAATCTTTCCAACACCTGAGTTCCTTTCCTCCTGTCAATACTTTAGTGGAGTCATGGAAATCACACGGCGACCTGTCGTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS CCA 72 bp ATAGCTCCCATCATCTGGTTCTTGTTTAATACCCACTaGGAATCCGCTGCCTTCACAGTTACCATCAAAGCC +
Preference number: 6 (lower is better)
Translates to: IAPIIWFLFNTH*ESAAFTVTIKA
Trigger: GGCTTTGATGGTAACTGTGAAGGCAGCGGATTCCCAGTGGGTATTAAACAAGAACCAGATGATGGGAGCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS TCA 72 bp GAGCGTGGAGAGCAGATTTTCGGCTGTATCTGGTTTTaGGCTGTCATAGCCTGCATATACAATTTCAGGTTC +
Preference number: 6 (lower is better)
Translates to: ERGEQIFGCIWF*AVIACIYNFRF
Trigger: GAACCTGAAATTGTATATGCAGGCTATGACAGCTCAAAACCAGATACAGCCGAAAATCTGCTCTCCACGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000503174.1
ENST00000503313.1
ENST00000511528.1
ENST00000625323.2
CDS TCA 72 bp TGGTGCATCCCCTGGCATAGTTCATACATGGCAGACTaGTGCATCTTCTCTTCATTAAAGACTAGGTCTGGT +
Preference number: 6 (lower is better)
Translates to: WCIPWHSSYMAD*CIFSSLKTRSG
Trigger: ACCAGACCTAGTCTTTAATGAAGAGAAGATGCATCAGTCTGCCATGTATGAACTATGCCAGGGGATGCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS TCA 72 bp TGGTGCATCCCCTGGCATAGTTCATACATGGCAGACTaGTGCATCTTCTCTCTCCTAAATTCATTCCAGCTT +
Preference number: 6 (lower is better)
Translates to: WCIPWHSSYMAD*CIFSLLNSFQL
Trigger: AAGCTGGAATGAATTTAGGAGAGAGAAGATGCATCAGTCTGCCATGTATGAACTATGCCAGGGGATGCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342437.8
CDS CAA 72 bp TGGGACTGGAGACTGGAGATTTTACACTGCAGTGACTaGGAGGGCTGGAAATTGAGGATTTCATGCTACTTA +
Preference number: 6 (lower is better)
Translates to: WDWRLEILHCSD*EGWKLRISCYL
Trigger: TAAGTAGCATGAAATCCTCAATTTCCAGCCCTCCAAGTCACTGCAGTGTAAAATCTCCAGTCTCCAGTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS CAA 72 bp AGGTCGCCGTGTGATTTCCATGACTCCACTAAAGTATaGACAGGAGGAAAGGAACTCAGGTGTTGGAAAGAT +
Preference number: 6 (lower is better)
Translates to: RSPCDFHDSTKV*TGGKELRCWKD
Trigger: ATCTTTCCAACACCTGAGTTCCTTTCCTCCTGTCAATACTTTAGTGGAGTCATGGAAATCACACGGCGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS CAA 90 bp GATCTGTTATTAGTGTTCGAAGGGCTGGAAACAGAGCACCTTGAGTaGTTAATATTTGCAGGGCTAGACACAGAGGATCTCAGAGTGACA +
Preference number: 6 (lower is better)
Translates to: DLLLVFEGLETEHLE*LIFAGLDTEDLRVT
Trigger: TGTCACTCTGAGATCCTCTGTGTCTAGCCCTGCAAATATTAACAACTCAAGGTGCTCTGTTTCCAGCCCTTCGAACACTAATAACAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS TCA 72 bp GTACTGGACAATATTAAGCTGGCCAGTCACACCATTTaGGATGGCACTCTCTACTTCCTCAGTCTTAGGAAA +
Preference number: 6 (lower is better)
Translates to: VLDNIKLASHTI*DGTLYFLSLRK
Trigger: TTTCCTAAGACTGAGGAAGTAGAGAGTGCCATCTCAAATGGTGTGACTGGCCAGCTTAATATTGTCCAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS CCA 72 bp AGACTGGAGATTTTACACTGCAGTGACTTGGAGGGCTaGAAATTGAGGATTTCATGCTACTTAACGGACTTG +
Preference number: 6 (lower is better)
Translates to: RLEILHCSDLEG*KLRISCYLTDL
Trigger: CAAGTCCGTTAAGTAGCATGAAATCCTCAATTTCCAGCCCTCCAAGTCACTGCAGTGTAAAATCTCCAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS CAA 72 bp GAGATTTTACACTGCAGTGACTTGGAGGGCTGGAAATaGAGGATTTCATGCTACTTAACGGACTTGAGAGAG +
Preference number: 6 (lower is better)
Translates to: EILHCSDLEGWK*RISCYLTDLRE
Trigger: CTCTCTCAAGTCCGTTAAGTAGCATGAAATCCTCAATTTCCAGCCCTCCAAGTCACTGCAGTGTAAAATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS CCA 72 bp TCTGGTTCTGGTTTTATGTACTGGACAATATTAAGCTaGCCAGTCACACCATTTGAGATGGCACTCTCTACT +
Preference number: 6 (lower is better)
Translates to: SGSGFMYWTILS*PVTPFEMALST
Trigger: AGTAGAGAGTGCCATCTCAAATGGTGTGACTGGCCAGCTTAATATTGTCCAGTACATAAAACCAGAACCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS CCA 72 bp CTGCTAAAAGCTCCATCTGGTTCTGGTTTTATGTACTaGACAATATTAAGCTGGCCAGTCACACCATTTGAG +
Preference number: 6 (lower is better)
Translates to: LLKAPSGSGFMY*TILSWPVTPFE
Trigger: CTCAAATGGTGTGACTGGCCAGCTTAATATTGTCCAGTACATAAAACCAGAACCAGATGGAGCTTTTAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS CCA 72 bp TTGACAGGAGGAAAGGAACTCAGGTGTTGGAAAGATTaGTCTCTAGCCGATCGTGATAAAGATATTGTACCT +
Preference number: 6 (lower is better)
Translates to: LTGGKELRCWKD*SLADRDKDIVP
Trigger: AGGTACAATATCTTTATCACGATCGGCTAGAGACCAATCTTTCCAACACCTGAGTTCCTTTCCTCCTGTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS CCA 72 bp ACTAAAGTATTGACAGGAGGAAAGGAACTCAGGTGTTaGAAAGATTGGTCTCTAGCCGATCGTGATAAAGAT +
Preference number: 6 (lower is better)
Translates to: TKVLTGGKELRC*KDWSLADRDKD
Trigger: ATCTTTATCACGATCGGCTAGAGACCAATCTTTCCAACACCTGAGTTCCTTTCCTCCTGTCAATACTTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS CAA 72 bp AACATTCTGATAAATCTTAGCTGGACTCATGCTTCCTaGTTGGTTCTGCTGCTCATAGGAATAGTCAGCATC +
Preference number: 6 (lower is better)
Translates to: NILINLSWTHAS*LVLLLIGIVSI
Trigger: GATGCTGACTATTCCTATGAGCAGCAGAACCAACAAGGAAGCATGAGTCCAGCTAAGATTTATCAGAATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS CAA 90 bp CTGTTCAACATTCTGATAAATCTTAGCTGGACTCATGCTTCCTTGTaGGTTCTGCTGCTCATAGGAATAGTCAGCATCTCTTACAGAATC +
Preference number: 6 (lower is better)
Translates to: LFNILINLSWTHASL*VLLLIGIVSISYRI
Trigger: GATTCTGTAAGAGATGCTGACTATTCCTATGAGCAGCAGAACCAACAAGGAAGCATGAGTCCAGCTAAGATTTATCAGAATGTTGAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS CAA 90 bp TGTGGGAAGGGGATGCGTAATAACAATAGTTACTTAGTTCTTGGGTaGGGATGTGCTTCAATATTAAGTGTGTACAACCGAATTACTACC +
Preference number: 6 (lower is better)
Translates to: CGKGMRNNNSYLVLG*GCASILSVYNRITT
Trigger: GGTAGTAATTCGGTTGTACACACTTAATATTGAAGCACATCCCAACCCAAGAACTAAGTAACTATTGTTATTACGCATCCCCTTCCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504753.1
CDS CAA 72 bp GGGATGCGTAATAACAATAGTTACTTAGTTCTTGGGTaGGGATGTGCTTCAATATTAAGTGTGTACAACCGA +
Preference number: 6 (lower is better)
Translates to: GMRNNNSYLVLG*GCASILSVYNR
Trigger: TCGGTTGTACACACTTAATATTGAAGCACATCCCAACCCAAGAACTAAGTAACTATTGTTATTACGCATCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504753.1
CDS CAA 90 bp TTTACTGTTGGATTCCCTTTAAAAGAGGTGCCTGAACATGAATGCTaGGTTGATTCTTGCTTTATTGGTACTGAGAATGAAGAATCCGAA +
Preference number: 6 (lower is better)
Translates to: FTVGFPLKEVPEHEC*VDSCFIGTENEESE
Trigger: TTCGGATTCTTCATTCTCAGTACCAATAAAGCAAGAATCAACCAAGCATTCATGTTCAGGCACCTCTTTTAAAGGGAATCCAACAGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2
CDS CCA 72 bp ATCATCCATAAAGGAAAAATACGAGCCATCCATAAATaGAAACGGGTTTACTGTTGGATTCCCTTTAAAAGA +
Preference number: 6 (lower is better)
Translates to: IIHKGKIRAIHK*KRVYCWIPFKR
Trigger: TCTTTTAAAGGGAATCCAACAGTAAACCCGTTTCCATTTATGGATGGCTCGTATTTTTCCTTTATGGATGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342437.8
ENST00000344721.8
ENST00000358102.8
ENST00000511528.1
ENST00000512865.5
ENST00000625323.2