RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NR3C1 (Homo sapiens)

Ensembl gene IDs: ENSG00000113580

Ensembl transcript IDs: ENST00000231509.7, ENST00000343796.6, ENST00000394464.7, ENST00000394466.6, ENST00000415690.6, ENST00000424646.6, ENST00000502500.1, ENST00000502892.5, ENST00000503201.1, ENST00000503701.1, ENST00000504336.1, ENST00000504572.5, ENST00000505058.5, ENST00000508760.5, ENST00000510170.5, ENST00000514699.1, ENST00000652686.1

Found 836 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CACACACACACAAAAACACATTCACCTACAGCTACAGTCAGGGAGTaGCCAGCCAAGATGGAAATCTCACTGAAGGCTACCATGGTTCTG +
Preference number: 1 (lower is better)
Translates to: HTHTKTHSPTATVRE*PAKMEISLKATMVL
Trigger: CAGAACCATGGTAGCCTTCAGTGAGATTTCCATCTTGGCTGGTCACTCCCTGACTGTAGCTGTAGGTGAATGTGTTTTTGTGTGTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
3UTR CCA 90 bp CAAACTATTGCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTaGGGGAGGGCTGTATGTGAAAGTAACCCGCTATTAGATGGTGCC +
Preference number: 1 (lower is better)
Translates to: QTIAKLLKLLLSFNC*GRAVCESNPLLDGA
Trigger: GGCACCATCTAATAGCGGGTTACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR CCA 90 bp ACCTGGTCACTAATCCTGGGTGGACCAGGTTGCTTGAAAATAGTCTaGGAAATTACGAAACTCCACCCAAAGGGTTTAAAGTGTCCTCCT +
Preference number: 1 (lower is better)
Translates to: TWSLILGGPGCLKIV*EITKLHPKGLKCPP
Trigger: AGGAGGACACTTTAAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGTCCACCCAGGATTAGTGACCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
3UTR TCA 90 bp CTACAGCTACAGTCAGGGAGTGACCAGCCAAGATGGAAATCTCACTaGAGGCTACCATGGTTCTGGAAGTTTGACAGATCAATGTATTGT +
Preference number: 1 (lower is better)
Translates to: LQLQSGSDQPRWKSH*RLPWFWKFDRSMYC
Trigger: ACAATACATTGATCTGTCAAACTTCCAGAACCATGGTAGCCTTCAGTGAGATTTCCATCTTGGCTGGTCACTCCCTGACTGTAGCTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
3UTR CCA 90 bp GAGAGAAGCAAATCCTTTCCTGAAAACCTGGTCACTAATCCTGGGTaGACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCA +
Preference number: 1 (lower is better)
Translates to: ERSKSFPENLVTNPG*TRLLENSLGNYETP
Trigger: TGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGGATTTGCTTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
3UTR TCA 90 bp ATCACACAGACTTTGGGCACTGGTGGTTTAGGTGCCATCCTTCTTTaGCTGTGGAGATTACGTCCACATATTAAGGTTTCTAATTTCTGG +
Preference number: 1 (lower is better)
Translates to: ITQTLGTGGLGAILL*LWRLRPHIKVSNFW
Trigger: CCAGAAATTAGAAACCTTAATATGTGGACGTAATCTCCACAGTCAAAGAAGGATGGCACCTAAACCACCAGTGCCCAAAGTCTGTGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
3UTR TCA 90 bp ATTTACATATTGCTGGTACCTCTATGCAAACTATTGCCAAACTTCTaGAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTG +
Preference number: 1 (lower is better)
Translates to: IYILLVPLCKLLPNF*SFCCHSTAGGGLYV
Trigger: CACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTGCATAGAGGTACCAGCAATATGTAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR CCA 90 bp AAAAAGTATGAAGAGAAAGTTCATCACACAGACTTTGGGCACTGGTaGTTTAGGTGCCATCCTTCTTTGACTGTGGAGATTACGTCCACA +
Preference number: 1 (lower is better)
Translates to: KKYEEKVHHTDFGHW*FRCHPSLTVEITST
Trigger: TGTGGACGTAATCTCCACAGTCAAAGAAGGATGGCACCTAAACCACCAGTGCCCAAAGTCTGTGTGATGAACTTTCTCTTCATACTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
3UTR CCA 90 bp ATTAGTCTTTTGCAACCATCATCCACAGTTTACCCAGCAGGTCACTaGACTAGGTGCTCTATACCAGTTAGGACTGTTAATTTGCACAAC +
Preference number: 1 (lower is better)
Translates to: ISLLQPSSTVYPAGH*TRCSIPVRTVNLHN
Trigger: GTTGTGCAAATTAACAGTCCTAACTGGTATAGAGCACCTAGTCCAGTGACCTGCTGGGTAAACTGTGGATGATGGTTGCAAAAGACTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR GCA 90 bp TTGCAACCATCATCCACAGTTTACCCAGCAGGTCACTGGACTAGGTaGTCTATACCAGTTAGGACTGTTAATTTGCACAACCTATATAAT +
Preference number: 1 (lower is better)
Translates to: LQPSSTVYPAGHWTR*SIPVRTVNLHNLYN
Trigger: ATTATATAGGTTGTGCAAATTAACAGTCCTAACTGGTATAGAGCACCTAGTCCAGTGACCTGCTGGGTAAACTGTGGATGATGGTTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR GCA 90 bp GATTCTGCACTATTTACATATTGCTGGTACCTCTATGCAAACTATTaGCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAG +
Preference number: 1 (lower is better)
Translates to: DSALFTYCWYLYANY*QTSEASVVIQLLGE
Trigger: CTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTGCATAGAGGTACCAGCAATATGTAAATAGTGCAGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR TCA 90 bp CCCCTAGAGCAAACTGTTTGGTTTCTGAGACCATCGCTGCCTGTATaGATGCATGTACAAACTATAAATCATATAGGTTATCCATCAGCA +
Preference number: 1 (lower is better)
Translates to: PLEQTVWFLRPSLPV*MHVQTINHIGYPSA
Trigger: TGCTGATGGATAACCTATATGATTTATAGTTTGTACATGCATTCATACAGGCAGCGATGGTCTCAGAAACCAAACAGTTTGCTCTAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR TCA 90 bp GCCAAGATGGAAATCTCACTGAAGGCTACCATGGTTCTGGAAGTTTaGCAGATCAATGTATTGTATAACAATATTTTTCATTCCATGGTG +
Preference number: 1 (lower is better)
Translates to: AKMEISLKATMVLEV*QINVLYNNIFHSMV
Trigger: CACCATGGAATGAAAAATATTGTTATACAATACATTGATCTGTCAAACTTCCAGAACCATGGTAGCCTTCAGTGAGATTTCCATCTTGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
3UTR GCA 90 bp TTTAGGCATTTGGATATATATACCCCAAAAGTGTTATGTCCTAAGTaGCTCAGTTCTGCTTGTATAGTATCCCACAGAATACCTACAAAC +
Preference number: 1 (lower is better)
Translates to: FRHLDIYTPKVLCPK*LSSACIVSHRIPTN
Trigger: GTTTGTAGGTATTCTGTGGGATACTATACAAGCAGAACTGAGGCACTTAGGACATAACACTTTTGGGGTATATATATCCAAATGCCTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
3UTR-3UTR CCA 90 bp CCAGCAGGTCACTGGACTAGGTGCTCTATACCAGTTAGGACTGTTAATTTGCACGACTTTGGGCACTGGTaGTTTAGGTGCCATCCTTCT +
Preference number: 2 (lower is better)
Translates to: PAGHWTRCSIPVRTVNLHDFGHW*FRCHPS
Trigger: AGAAGGATGGCACCTAAACCACCAGTGCCCAAAGTC...GTGCAAATTAACAGTCCTAACTGGTATAGAGCACCTAGTCCAGTGACCTGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR-3UTR CCA 90 bp AGAGAAGCAAATCCTTTCCTGAAAACCTGGTCACTAATCCTGGGTGGACCAGGTTACCCAGCAGGTCACTaGACTAGGTGCTCTATACCA +
Preference number: 2 (lower is better)
Translates to: REANPFLKTWSLILGGPGYPAGH*TRCSIP
Trigger: TGGTATAGAGCACCTAGTCCAGTGACCTGCTGGGTA...ACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGGATTTGCTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
3UTR CAA 90 bp GCTGGTACCTCTATGCAAACTATTGCCAAACTTCTGAAGCTTCTGTaGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTAACCCG +
Preference number: 2 (lower is better)
Translates to: AGTSMQTIAKLLKLL*SFNCWGRAVCESNP
Trigger: CGGGTTACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTGCATAGAGGTACCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR-3UTR TCA 90 bp AAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTAACCCGCTACTCTCCCATCACTaGAAAGTGATGACGACTCAA +
Preference number: 2 (lower is better)
Translates to: KLLLSFNCWGRAVCESNPLLSHH*KVMTTQ
Trigger: TTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAG...CGGGTTACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR-3UTR TCA 90 bp CAAACTATTGCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGGTGCCATCCTTCTTTaGCTGTGGAGATTACGTCCA +
Preference number: 2 (lower is better)
Translates to: QTIAKLLKLLLSFNCWGRGAILL*LWRLRP
Trigger: TGGACGTAATCTCCACAGTCAAAGAAGGATGGCACC...CCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR-3UTR TCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACGGTGCCATCCTTCTTTaGCTGTGGAGATTACGTCCA +
Preference number: 2 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHGAILL*LWRLRP
Trigger: TGGACGTAATCTCCACAGTCAAAGAAGGATGGCACC...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
3UTR-3UTR TCA 90 bp AAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTAACCCGAAACTAAACCTGCGCTaGCAGACTCACTGTTGGAAT +
Preference number: 2 (lower is better)
Translates to: KLLLSFNCWGRAVCESNPKLNLR*QTHCWN
Trigger: ATTCCAACAGTGAGTCTGTCAGCGCAGGTTTAGTTT...CGGGTTACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR-3UTR CCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACGACTTTGGGCACTGGTaGTTTAGGTGCCATCCTTCT +
Preference number: 2 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHDFGHW*FRCHPS
Trigger: AGAAGGATGGCACCTAAACCACCAGTGCCCAAAGTC...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
3UTR-3UTR CCA 90 bp CAAACTATTGCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGACTTTGGGCACTGGTaGTTTAGGTGCCATCCTTCT +
Preference number: 2 (lower is better)
Translates to: QTIAKLLKLLLSFNCWGRDFGHW*FRCHPS
Trigger: AGAAGGATGGCACCTAAACCACCAGTGCCCAAAGTC...CCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR-3UTR GCA 90 bp CAAACTATTGCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGGTCACTGGACTAGGTaGTCTATACCAGTTAGGACT +
Preference number: 2 (lower is better)
Translates to: QTIAKLLKLLLSFNCWGRGHWTR*SIPVRT
Trigger: AGTCCTAACTGGTATAGAGCACCTAGTCCAGTGACC...CCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR-3UTR CCA 90 bp CATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATAGACACAAATCAGACTTTGGGCACTGGTaGTTTAGGTGCCATCCTTCT +
Preference number: 2 (lower is better)
Translates to: HAQSSSHANYPALHRHKSDFGHW*FRCHPS
Trigger: AGAAGGATGGCACCTAAACCACCAGTGCCCAAAGTC...TGATTTGTGTCTATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
3UTR-3UTR CCA 90 bp CATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATAGACACAAATCAACAGACTTTGGGCACTaGTGGTTTAGGTGCCATCCT +
Preference number: 2 (lower is better)
Translates to: HAQSSSHANYPALHRHKSTDFGH*WFRCHP
Trigger: AGGATGGCACCTAAACCACCAGTGCCCAAAGTCTGT...TGATTTGTGTCTATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
3UTR CAA 90 bp CCTTTCCTGAAAACCTGGTCACTAATCCTGGGTGGACCAGGTTGCTaGAAAATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTA +
Preference number: 2 (lower is better)
Translates to: PFLKTWSLILGGPGC*KIVWEITKLHPKGL
Trigger: TAAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
3UTR CAA 90 bp AAATCCTTTCCTGAAAACCTGGTCACTAATCCTGGGTGGACCAGGTaGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCAAAGGG +
Preference number: 2 (lower is better)
Translates to: KSFPENLVTNPGWTR*LENSLGNYETPPKG
Trigger: CCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
3UTR-3UTR TCA 90 bp ACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTGGTGCCATCCTTCTTTaGCTGTGGAGATTACGTCCA +
Preference number: 2 (lower is better)
Translates to: TRLLENSLGNYETPPKGFGAILL*LWRLRP
Trigger: TGGACGTAATCTCCACAGTCAAAGAAGGATGGCACC...AAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
3UTR-3UTR TCA 90 bp CAAACTATTGCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGAAACTGTTTGGTTTCTaGGACCATCGCTGCCTGTAT +
Preference number: 2 (lower is better)
Translates to: QTIAKLLKLLLSFNCWGRKLFGF*DHRCLY
Trigger: ATACAGGCAGCGATGGTCTCAGAAACCAAACAGTTT...CCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR-3UTR TCA 90 bp CAAACTATTGCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGAAACTAAACCTGCGCTaGCAGACTCACTGTTGGAAT +
Preference number: 2 (lower is better)
Translates to: QTIAKLLKLLLSFNCWGRKLNLR*QTHCWN
Trigger: ATTCCAACAGTGAGTCTGTCAGCGCAGGTTTAGTTT...CCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR-3UTR GCA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTAGAAAGTTGGTAAGGTaGACACAGAAAGGGCTACTA +
Preference number: 2 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESRKLVR*TQKGLL
Trigger: TAGTAGCCCTTTCTGTGTGCACCTTACCAACTTTCT...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR-3UTR GCA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTTTGCCATATAGCCATTaGAAAAATAGGGCGTTAGGT +
Preference number: 2 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESLPYSH*KNRALG
Trigger: ACCTAACGCCCTATTTTTGCAATGGCTATATGGCAA...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR-3UTR GCA 90 bp CAAACTATTGCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGAGAAAGTTGGTAAGGTaGACACAGAAAGGGCTACTA +
Preference number: 2 (lower is better)
Translates to: QTIAKLLKLLLSFNCWGRRKLVR*TQKGLL
Trigger: TAGTAGCCCTTTCTGTGTGCACCTTACCAACTTTCT...CCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR-3UTR GCA 90 bp CTAACATTTACTGCCAATTCGGTACAAATGTGTGGTTTGGTAATACCAGAACAGCTTTCCTTCATGGCATaGCCAGAGCTCATCCCATGC +
Preference number: 2 (lower is better)
Translates to: LTFTANSVQMCGLVIPEQLSFMA*PELIPC
Trigger: GCATGGGATGAGCTCTGGGCATGCCATGAAGGAAAG...CTGTTCTGGTATTACCAAACCACACATTTGTACCGAATTGGCAGTAAATGTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
3UTR-3UTR GCA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTGTTTACCAGCTTTCTTaGCATATAGCCATTGCAAAA +
Preference number: 2 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESVYQLS*HIAIAK
Trigger: TTTTGCAATGGCTATATGGCAAGAAAGCTGGTAAAC...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR-3UTR TCA 90 bp CAAACTATTGCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGACAAACATGGATGTCTaGCATACAGTTCTAAATCAC +
Preference number: 2 (lower is better)
Translates to: QTIAKLLKLLLSFNCWGRTNMDV*HTVLNH
Trigger: GTGATTTAGAACTGTATGTCAGACATCCATGTTTGT...CCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR-3UTR GCA 90 bp ACAGTGAAGAAATTCACAGGACTTGTGTTAAACTCTATGGCACACATTAGGGATGGTCACTGGACTAGGTaGTCTATACCAGTTAGGACT +
Preference number: 2 (lower is better)
Translates to: TVKKFTGLVLNSMAHIRDGHWTR*SIPVRT
Trigger: AGTCCTAACTGGTATAGAGCACCTAGTCCAGTGACC...ATCCCTAATGTGTGCCATAGAGTTTAACACAAGTCCTGTGAATTTCTTCACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR-3UTR TCA 90 bp CATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATAGACACAAATCAACAAACATGGATGTCTaGCATACAGTTCTAAATCAC +
Preference number: 2 (lower is better)
Translates to: HAQSSSHANYPALHRHKSTNMDV*HTVLNH
Trigger: GTGATTTAGAACTGTATGTCAGACATCCATGTTTGT...TGATTTGTGTCTATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
3UTR-3UTR GCA 90 bp GGCATTTGGATATATATACCCCAAAAGTGTTATGTCCTAAGTGCCTCAGTTCTGAGAAAGTTGGTAAGGTaGACACAGAAAGGGCTACTA +
Preference number: 2 (lower is better)
Translates to: GIWIYIPQKCYVLSASVLRKLVR*TQKGLL
Trigger: TAGTAGCCCTTTCTGTGTGCACCTTACCAACTTTCT...CAGAACTGAGGCACTTAGGACATAACACTTTTGGGGTATATATATCCAAATGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
3UTR-3UTR CCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACTGTTTAGAGTTTATTTaGGAAAGCTACGAACTAGCT +
Preference number: 2 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHCLEFI*ESYELA
Trigger: AGCTAGTTCGTAGCTTTCCCAAATAAACTCTAAACA...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
3UTR-3UTR CCA 90 bp ACTACTTCAAAAGGTCCTGAAAGACAAATAGTTTACCAGCTTTCTTGCCATATATACCCAGCAGGTCACTaGACTAGGTGCTCTATACCA +
Preference number: 2 (lower is better)
Translates to: TTSKGPERQIVYQLSCHIYPAGH*TRCSIP
Trigger: TGGTATAGAGCACCTAGTCCAGTGACCTGCTGGGTA...TATATGGCAAGAAAGCTGGTAAACTATTTGTCTTTCAGGACCTTTTGAAGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR-3UTR CCA 90 bp CAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATCAGCCAATTGGTGACAGATaGGAATGTGAAAATGGGTGT +
Preference number: 2 (lower is better)
Translates to: QLLFPFNEKPPIVVDEHQPIGDR*ECENGC
Trigger: ACACCCATTTTCACATTCCCATCTGTCACCAATTGG...CTGATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
3UTR-3UTR TCA 90 bp ACAGTGAAGAAATTCACAGGACTTGTGTTAAACTCTATGGCACACATTAGGGATACAAAAATCAGTAGCTaGGCTTTCCTGTACCATCAG +
Preference number: 2 (lower is better)
Translates to: TVKKFTGLVLNSMAHIRDTKISS*AFLYHQ
Trigger: CTGATGGTACAGGAAAGCTCAGCTACTGATTTTTGT...ATCCCTAATGTGTGCCATAGAGTTTAACACAAGTCCTGTGAATTTCTTCACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR-3UTR CCA 90 bp CTAACATTTACTGCCAATTCGGTACAAATGTGTGGTTTGGTAATACCAGAACAGCAGCTGTGTTACAGCTaGTTATCTGGAATCACAACT +
Preference number: 2 (lower is better)
Translates to: LTFTANSVQMCGLVIPEQQLCYS*LSGITT
Trigger: AGTTGTGATTCCAGATAACCAGCTGTAACACAGCTG...CTGTTCTGGTATTACCAAACCACACATTTGTACCGAATTGGCAGTAAATGTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
3UTR-3UTR CCA 90 bp CTAACATTTACTGCCAATTCGGTACAAATGTGTGGTTTGGTAATACCAGAACAGAGGCTACCATGGTTCTaGAAGTTTGACAGATCAATG +
Preference number: 2 (lower is better)
Translates to: LTFTANSVQMCGLVIPEQRLPWF*KFDRSM
Trigger: CATTGATCTGTCAAACTTCCAGAACCATGGTAGCCT...CTGTTCTGGTATTACCAAACCACACATTTGTACCGAATTGGCAGTAAATGTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
3UTR CAA 90 bp GCAGGTCACTGGACTAGGTGCTCTATACCAGTTAGGACTGTTAATTaGCACAACCTATATAATTCTCCACTGAAGCAGATATATACAAAA +
Preference number: 2 (lower is better)
Translates to: AGHWTRCSIPVRTVN*HNLYNSPLKQIYTK
Trigger: TTTTGTATATATCTGCTTCAGTGGAGAATTATATAGGTTGTGCAAATTAACAGTCCTAACTGGTATAGAGCACCTAGTCCAGTGACCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR-3UTR GCA 90 bp CTAACATTTACTGCCAATTCGGTACAAATGTGTGGTTTGGTAATACCAGAACAGTTGCCATATAGCCATTaGAAAAATAGGGCGTTAGGT +
Preference number: 2 (lower is better)
Translates to: LTFTANSVQMCGLVIPEQLPYSH*KNRALG
Trigger: ACCTAACGCCCTATTTTTGCAATGGCTATATGGCAA...CTGTTCTGGTATTACCAAACCACACATTTGTACCGAATTGGCAGTAAATGTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
3UTR-3UTR CCA 90 bp GGCATTTGGATATATATACCCCAAAAGTGTTATGTCCTAAGTGCCTCAGTTCTGGAGCGCCAAGATTGTTaGGATGAAAATCAGATTAAT +
Preference number: 2 (lower is better)
Translates to: GIWIYIPQKCYVLSASVLERQDC*DENQIN
Trigger: ATTAATCTGATTTTCATCCCAACAATCTTGGCGCTC...CAGAACTGAGGCACTTAGGACATAACACTTTTGGGGTATATATATCCAAATGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
3UTR-3UTR TCA 90 bp CTAACATTTACTGCCAATTCGGTACAAATGTGTGGTTTGGTAATACCAGAACAGACAAACATGGATGTCTaGCATACAGTTCTAAATCAC +
Preference number: 2 (lower is better)
Translates to: LTFTANSVQMCGLVIPEQTNMDV*HTVLNH
Trigger: GTGATTTAGAACTGTATGTCAGACATCCATGTTTGT...CTGTTCTGGTATTACCAAACCACACATTTGTACCGAATTGGCAGTAAATGTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
3UTR-3UTR TCA 90 bp CTAACATTTACTGCCAATTCGGTACAAATGTGTGGTTTGGTAATACCAGAACAGTCGATGAGCATCAGTTaGCTTATTATTGACAACGAA +
Preference number: 2 (lower is better)
Translates to: LTFTANSVQMCGLVIPEQSMSIS*LIIDNE
Trigger: TTCGTTGTCAATAATAAGTCAACTGATGCTCATCGA...CTGTTCTGGTATTACCAAACCACACATTTGTACCGAATTGGCAGTAAATGTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
3UTR-3UTR CCA 90 bp GGCATTTGGATATATATACCCCAAAAGTGTTATGTCCTAAGTGCCTCAGTTCTGTGTTTAGAGTTTATTTaGGAAAGCTACGAACTAGCT +
Preference number: 2 (lower is better)
Translates to: GIWIYIPQKCYVLSASVLCLEFI*ESYELA
Trigger: AGCTAGTTCGTAGCTTTCCCAAATAAACTCTAAACA...CAGAACTGAGGCACTTAGGACATAACACTTTTGGGGTATATATATCCAAATGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
3UTR-3UTR CAA 90 bp CCTGGGTGGACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCACTCAACTGCTTCTGTaGCCAAGTCTTGGCCCTCTA +
Preference number: 3 (lower is better)
Translates to: PGWTRLLENSLGNYETPPTQLLL*PSLGPL
Trigger: TAGAGGGCCAAGACTTGGCAACAGAAGCAGTTGAGT...GGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGTCCACCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
3UTR-3UTR CAA 90 bp AAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTAACCCGAGGTGCCATCCTTCTTaGACTGTGGAGATTACGTCC +
Preference number: 3 (lower is better)
Translates to: KLLLSFNCWGRAVCESNPRCHPS*TVEITS
Trigger: GGACGTAATCTCCACAGTCAAAGAAGGATGGCACCT...CGGGTTACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR-3UTR CAA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTAGGTGCCATCCTTCTTaGACTGTGGAGATTACGTCC +
Preference number: 3 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESRCHPS*TVEITS
Trigger: GGACGTAATCTCCACAGTCAAAGAAGGATGGCACCT...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR TCA 72 bp CAGTCAGGGAGTGACCAGCCAAGATGGAAATCTCACTaGAGGCTACCATGGTTCTGGAAGTTTGACAGATCA +
Preference number: 3 (lower is better)
Translates to: QSGSDQPRWKSH*RLPWFWKFDRS
Trigger: TGATCTGTCAAACTTCCAGAACCATGGTAGCCTTCAGTGAGATTTCCATCTTGGCTGGTCACTCCCTGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
3UTR GCA 72 bp GTTCATCACACAGACTTTGGGCACTGGTGGTTTAGGTaGCATCCTTCTTTGACTGTGGAGATTACGTCCACA +
Preference number: 3 (lower is better)
Translates to: VHHTDFGHWWFR*HPSLTVEITST
Trigger: TGTGGACGTAATCTCCACAGTCAAAGAAGGATGGCACCTAAACCACCAGTGCCCAAAGTCTGTGTGATGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
3UTR-3UTR CAA 90 bp CCAGCAGGTCACTGGACTAGGTGCTCTATACCAGTTAGGACTGTTAATTTGCACTTCATCACACAGACTTaGGGCACTGGTGGTTTAGGT +
Preference number: 3 (lower is better)
Translates to: PAGHWTRCSIPVRTVNLHFITQT*GTGGLG
Trigger: ACCTAAACCACCAGTGCCCAAAGTCTGTGTGATGAA...GTGCAAATTAACAGTCCTAACTGGTATAGAGCACCTAGTCCAGTGACCTGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR-3UTR CAA 90 bp TTTCCTTCATGGCATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATTTCATCACACAGACTTaGGGCACTGGTGGTTTAGGT +
Preference number: 3 (lower is better)
Translates to: FPSWHAQSSSHANYPALHFITQT*GTGGLG
Trigger: ACCTAAACCACCAGTGCCCAAAGTCTGTGTGATGAA...ATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATGCCATGAAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
3UTR-3UTR CAA 90 bp CAAAAACACATTCACCTACAGCTACAGTCAGGGAGTGACCAGCCAAGATGGAAATTCATCACACAGACTTaGGGCACTGGTGGTTTAGGT +
Preference number: 3 (lower is better)
Translates to: QKHIHLQLQSGSDQPRWKFITQT*GTGGLG
Trigger: ACCTAAACCACCAGTGCCCAAAGTCTGTGTGATGAA...TTTCCATCTTGGCTGGTCACTCCCTGACTGTAGCTGTAGGTGAATGTGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
3UTR CCA 72 bp GCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTaGGGGAGGGCTGTATGTGAAAGTAACCCGCTATTA +
Preference number: 3 (lower is better)
Translates to: AKLLKLLLSFNC*GRAVCESNPLL
Trigger: TAATAGCGGGTTACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR-3UTR CAA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACTTCTGTTGCCAAGTCTaGGCCCTCTATAAACCACAT +
Preference number: 3 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHFCCQV*ALYKPH
Trigger: ATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAA...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
3UTR-3UTR CAA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTGGAAAGATTAACCAATaGGTGACAGATGGGAATGTG +
Preference number: 3 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESGKINQ*VTDGNV
Trigger: CACATTCCCATCTGTCACCAATTGGTTAATCTTTCC...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR GCA 72 bp TCATCCACAGTTTACCCAGCAGGTCACTGGACTAGGTaGTCTATACCAGTTAGGACTGTTAATTTGCACAAC +
Preference number: 3 (lower is better)
Translates to: SSTVYPAGHWTR*SIPVRTVNLHN
Trigger: GTTGTGCAAATTAACAGTCCTAACTGGTATAGAGCACCTAGTCCAGTGACCTGCTGGGTAAACTGTGGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR CCA 72 bp GAAGAGAAAGTTCATCACACAGACTTTGGGCACTGGTaGTTTAGGTGCCATCCTTCTTTGACTGTGGAGATT +
Preference number: 3 (lower is better)
Translates to: EEKVHHTDFGHW*FRCHPSLTVEI
Trigger: AATCTCCACAGTCAAAGAAGGATGGCACCTAAACCACCAGTGCCCAAAGTCTGTGTGATGAACTTTCTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
3UTR CCA 72 bp TTGCAACCATCATCCACAGTTTACCCAGCAGGTCACTaGACTAGGTGCTCTATACCAGTTAGGACTGTTAAT +
Preference number: 3 (lower is better)
Translates to: LQPSSTVYPAGH*TRCSIPVRTVN
Trigger: ATTAACAGTCCTAACTGGTATAGAGCACCTAGTCCAGTGACCTGCTGGGTAAACTGTGGATGATGGTTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR TCA 72 bp ACTTTGGGCACTGGTGGTTTAGGTGCCATCCTTCTTTaGCTGTGGAGATTACGTCCACATATTAAGGTTTCT +
Preference number: 3 (lower is better)
Translates to: TLGTGGLGAILL*LWRLRPHIKVS
Trigger: AGAAACCTTAATATGTGGACGTAATCTCCACAGTCAAAGAAGGATGGCACCTAAACCACCAGTGCCCAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
3UTR-3UTR CAA 90 bp GGCATTTGGATATATATACCCCAAAAGTGTTATGTCCTAAGTGCCTCAGTTCTGCTTCAACAGTTTGGGTaGGGATGGCCAGATAACACA +
Preference number: 3 (lower is better)
Translates to: GIWIYIPQKCYVLSASVLLQQFG*GWPDNT
Trigger: TGTGTTATCTGGCCATCCCAACCCAAACTGTTGAAG...CAGAACTGAGGCACTTAGGACATAACACTTTTGGGGTATATATATCCAAATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
3UTR GCA 72 bp ACAAATAGTTTACCAGCTTTCTTGCCATATAGCCATTaGAAAAATAGGGCGTTAGGTACAGACAGGGCCTCT +
Preference number: 3 (lower is better)
Translates to: TNSLPAFLPYSH*KNRALGTDRAS
Trigger: AGAGGCCCTGTCTGTACCTAACGCCCTATTTTTGCAATGGCTATATGGCAAGAAAGCTGGTAAACTATTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR CCA 72 bp AAATCCTTTCCTGAAAACCTGGTCACTAATCCTGGGTaGACCAGGTTGCTTGAAAATAGTCTGGGAAATTAC +
Preference number: 3 (lower is better)
Translates to: KSFPENLVTNPG*TRLLENSLGNY
Trigger: GTAATTTCCCAGACTATTTTCAAGCAACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
3UTR-3UTR CAA 90 bp ACAGTGAAGAAATTCACAGGACTTGTGTTAAACTCTATGGCACACATTAGGGATTTCTGTTGCCAAGTCTaGGCCCTCTATAAACCACAT +
Preference number: 3 (lower is better)
Translates to: TVKKFTGLVLNSMAHIRDFCCQV*ALYKPH
Trigger: ATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAA...ATCCCTAATGTGTGCCATAGAGTTTAACACAAGTCCTGTGAATTTCTTCACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR-3UTR CAA 90 bp TCTATACCAGTTAGGACTGTTAATTTGCACAACCTATATAATTCTCCACTGAAGACTCAACTGCTTCTGTaGCCAAGTCTTGGCCCTCTA +
Preference number: 3 (lower is better)
Translates to: SIPVRTVNLHNLYNSPLKTQLLL*PSLGPL
Trigger: TAGAGGGCCAAGACTTGGCAACAGAAGCAGTTGAGT...CTTCAGTGGAGAATTATATAGGTTGTGCAAATTAACAGTCCTAACTGGTATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR-3UTR CAA 90 bp CAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATCAGGGAAAGATTAACCAATaGGTGACAGATGGGAATGTG +
Preference number: 3 (lower is better)
Translates to: QLLFPFNEKPPIVVDEHQGKINQ*VTDGNV
Trigger: CACATTCCCATCTGTCACCAATTGGTTAATCTTTCC...CTGATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
3UTR-3UTR CAA 90 bp GGATTTGTTGTGAGTAACCAACTCTCACTGAAGTTACTACAAACTTCAACAGTTTTCTGTTGCCAAGTCTaGGCCCTCTATAAACCACAT +
Preference number: 3 (lower is better)
Translates to: GFVVSNQLSLKLLQTSTVFCCQV*ALYKPH
Trigger: ATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAA...AACTGTTGAAGTTTGTAGTAACTTCAGTGAGAGTTGGTTACTCACAACAAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
3UTR-3UTR CAA 90 bp GGCATTTGGATATATATACCCCAAAAGTGTTATGTCCTAAGTGCCTCAGTTCTGTGCACTATTTACATATaGCTGGTACCTCTATGCAAA +
Preference number: 3 (lower is better)
Translates to: GIWIYIPQKCYVLSASVLCTIYI*LVPLCK
Trigger: TTTGCATAGAGGTACCAGCAATATGTAAATAGTGCA...CAGAACTGAGGCACTTAGGACATAACACTTTTGGGGTATATATATCCAAATGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
3UTR-3UTR CAA 90 bp GGCATTTGGATATATATACCCCAAAAGTGTTATGTCCTAAGTGCCTCAGTTCTGGGAATTAGTGTATTATaGGCAACCTATGAGATTCTG +
Preference number: 3 (lower is better)
Translates to: GIWIYIPQKCYVLSASVLGISVL*ATYEIL
Trigger: CAGAATCTCATAGGTTGCCAATAATACACTAATTCC...CAGAACTGAGGCACTTAGGACATAACACTTTTGGGGTATATATATCCAAATGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
3UTR GCA 72 bp CTATTTACATATTGCTGGTACCTCTATGCAAACTATTaGCAAACTTCTGAAGCTTCTGTTGTCATTCAACTG +
Preference number: 3 (lower is better)
Translates to: LFTYCWYLYANY*QTSEASVVIQL
Trigger: CAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTGCATAGAGGTACCAGCAATATGTAAATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR GCA 72 bp TTGGATATATATACCCCAAAAGTGTTATGTCCTAAGTaGCTCAGTTCTGCTTGTATAGTATCCCACAGAATA +
Preference number: 3 (lower is better)
Translates to: LDIYTPKVLCPK*LSSACIVSHRI
Trigger: TATTCTGTGGGATACTATACAAGCAGAACTGAGGCACTTAGGACATAACACTTTTGGGGTATATATATCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
3UTR-3UTR CAA 90 bp TCTATACCAGTTAGGACTGTTAATTTGCACAACCTATATAATTCTCCACTGAAGATGTTTAGAGTTTATTaGGGAAAGCTACGAACTAGC +
Preference number: 3 (lower is better)
Translates to: SIPVRTVNLHNLYNSPLKMFRVY*GKLRTS
Trigger: GCTAGTTCGTAGCTTTCCCAAATAAACTCTAAACAT...CTTCAGTGGAGAATTATATAGGTTGTGCAAATTAACAGTCCTAACTGGTATAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR TCA 72 bp CAAACTGTTTGGTTTCTGAGACCATCGCTGCCTGTATaGATGCATGTACAAACTATAAATCATATAGGTTAT +
Preference number: 3 (lower is better)
Translates to: QTVWFLRPSLPV*MHVQTINHIGY
Trigger: ATAACCTATATGATTTATAGTTTGTACATGCATTCATACAGGCAGCGATGGTCTCAGAAACCAAACAGTTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
3UTR TCA 72 bp CCTATAGTTGTCGATGAGCATCAGTTGACTTATTATTaGCAACGAAGTGCACATAATCTTCTTTTTCTCATT +
Preference number: 3 (lower is better)
Translates to: PIVVDEHQLTYY*QRSAHNLLFLI
Trigger: AATGAGAAAAAGAAGATTATGTGCACTTCGTTGTCAATAATAAGTCAACTGATGCTCATCGACAACTATAGG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp CCTGGGTGGACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCCCGACGGGCAGGCGGTaGCTCGGGCTCCCGTCACAG +
Preference number: 4 (lower is better)
Translates to: PGWTRLLENSLGNYETPPPTGRR*LGLPSQ
Trigger: CTGTGACGGGAGCCCGAGTCACCGCCTGCCCGTCGG...GGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGTCCACCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394464.7
CDS-3UTR TCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTCCGACGGGCAGGCGGTaGCTCGGGCTCCCGTCACAG +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSPTGRR*LGLPSQ
Trigger: CTGTGACGGGAGCCCGAGTCACCGCCTGCCCGTCGG...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231509.7
ENST00000394464.7
CDS-3UTR GCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTCGTCCCGGTCCCAGCTaGTTCGGCCGCTCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSRPGPS*FGRSGC
Trigger: GCAGCCGGAGCGGCCGAAGCAGCTGGGACCGGGACG...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231509.7
ENST00000394464.7
CDS-3UTR GCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCTTCGGCCGCTCCGGCTaGGGCGTCTCCTTCCACCCA +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVAFGRSG*GVSFHP
Trigger: TGGGTGGAAGGAGACGCCGCAGCCGGAGCGGCCGAA...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231509.7
ENST00000394464.7
CDS-3UTR GCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTCGTCCCGGTCCCAGCTaGTTCGGCCGCTCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIRPGPS*FGRSGC
Trigger: GCAGCCGGAGCGGCCGAAGCAGCTGGGACCGGGACG...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231509.7
ENST00000394464.7
CDS-3UTR GCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTCTCGGGAGCTCGCTCTaGCCCTTGGCGGCAAGCGCC +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRILGSSL*PLAASA
Trigger: GGCGCTTGCCGCCAAGGGGCAGAGCGAGCTCCCGAG...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394466.6
CDS-3UTR TCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCCCCCCGAGGAAAGGCTaGTTTGGCCCTGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVAPPRKG*FGPAVG
Trigger: TCCCACAGCAGGGCCAAATCAGCCTTTCCTCGGGGG...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
54% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR GCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTTTCGGCCGCTCCGGCTaGGGCGTCTCCTTCCACCCA +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIFGRSG*GVSFHP
Trigger: TGGGTGGAAGGAGACGCCGCAGCCGGAGCGGCCGAA...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231509.7
ENST00000394464.7
CDS-3UTR CCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACCACGAGCTCGCAAAATaGAGGAGGCGGCGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHHELAK*RRRRRR
Trigger: CCTCCGCCGCCGCCTCCTCCATTTTGCGAGCTCGTG...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231509.7
ENST00000394464.7
CDS-3UTR CCA 90 bp TTTCCTTCATGGCATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATCACGAGCTCGCAAAATaGAGGAGGCGGCGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: FPSWHAQSSSHANYPALHHELAK*RRRRRR
Trigger: CCTCCGCCGCCGCCTCCTCCATTTTGCGAGCTCGTG...ATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATGCCATGAAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394464.7
CDS-3UTR TCA 90 bp CCAGCAGGTCACTGGACTAGGTGCTCTATACCAGTTAGGACTGTTAATTTGCACACATCTCCCCTCTCCTaGGCAAGCACACTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PAGHWTRCSIPVRTVNLHTSPLS*ASTLLG
Trigger: CCCCAGCAGTGTGCTTGCTCAGGAGAGGGGAGATGT...GTGCAAATTAACAGTCCTAACTGGTATAGAGCACCTAGTCCAGTGACCTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCACATCTCCCCTCTCCTaGGCAAGCACACTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVATSPLS*ASTLLG
Trigger: CCCCAGCAGTGTGCTTGCTCAGGAGAGGGGAGATGT...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTCCCCCGAGGAAAGGCTaGTTTGGCCCTGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSPPRKG*FGPAVG
Trigger: TCCCACAGCAGGGCCAAATCAGCCTTTCCTCGGGGG...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACACATCTCCCCTCTCCTaGGCAAGCACACTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHTSPLS*ASTLLG
Trigger: CCCCAGCAGTGTGCTTGCTCAGGAGAGGGGAGATGT...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR TCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTCCCCCGAGGAAAGGCTaGTTTGGCCCTGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIPPRKG*FGPAVG
Trigger: TCCCACAGCAGGGCCAAATCAGCCTTTCCTCGGGGG...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp CCTGGGTGGACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCGAGGAAAGGCTGATTTaGCCCTGCTGTGGGAATCCC +
Preference number: 4 (lower is better)
Translates to: PGWTRLLENSLGNYETPPEERLI*PCCGNP
Trigger: GGGATTCCCACAGCAGGGCCAAATCAGCCTTTCCTC...GGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGTCCACCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTACATCTCCCCTCTCCTaGGCAAGCACACTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRITSPLS*ASTLLG
Trigger: CCCCAGCAGTGTGCTTGCTCAGGAGAGGGGAGATGT...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCTCGCTGCTTGGAGTCTaGTTGAGAAGCGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVASLLGV*LRSDSQ
Trigger: CTGGCTGTCGCTTCTCAATCAGACTCCAAGCAGCGA...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp ATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTAAAGTGTCCTCCTTACCCCCCGAGGAAAGGCTaGTTTGGCCCTGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: IVWEITKLHPKGLKCPPYPPRKG*FGPAVG
Trigger: TCCCACAGCAGGGCCAAATCAGCCTTTCCTCGGGGG...GTAAGGAGGACACTTTAAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTAT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp AGAGAAGCAAATCCTTTCCTGAAAACCTGGTCACTAATCCTGGGTGGACCAGGTCACAGCAGTGGATGCTaGACTCTTGGGGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: REANPFLKTWSLILGGPGHSSGC*TLGVLW
Trigger: CCAGAGAACCCCAAGAGTTCAGCATCCACTGCTGTG...ACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGGATTTGCTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCCACAGCAGTGGATGCTaGACTCTTGGGGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVAHSSGC*TLGVLW
Trigger: CCAGAGAACCCCAAGAGTTCAGCATCCACTGCTGTG...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp AAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTAACCCGAATAACCTCCAACAGTaGCACCAGGGTAGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: KLLLSFNCWGRAVCESNPNNLQQ*HQGRGE
Trigger: CTCACCCCTACCCTGGTGTCACTGTTGGAGGTTATT...CGGGTTACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTCCTGCCTCTGAATTCTaGAGGGAGCGTGGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESPASEF*RERGFP
Trigger: AGGAAAGCCACGCTCCCTTCAGAATTCAGAGGCAGG...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR GCA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTAGGCTGATTTGGCCCTaGTGTGGGAATCCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESRLIWP*CGNPRS
Trigger: TGACCTGGGATTCCCACAGCAGGGCCAAATCAGCCT...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR GCA 90 bp AAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTAACCCGCATTGCCACCGTTGGTaGCAGTCTGGCCCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: KLLLSFNCWGRAVCESNPHCHRW*QSGPSN
Trigger: ATTTGAAGGGCCAGACTGGCACCAACGGTGGCAATG...CGGGTTACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR GCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCTGCCCATTTCACTGCTaGAATCACTTGCCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVACPFHC*NHLPPS
Trigger: GGAGGGCGGCAAGTGATTGCAGCAGTGAAATGGGCA...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAGTGAATATCAACTCTaGCAGAGGAGCCGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVASEYQL*QRSRSP
Trigger: GGGCGAGCGGCTCCTCTGCCAGAGTTGATATTCACT...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231509.7
ENST00000394464.7
CDS-3UTR CCA 90 bp CCTGGGTGGACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCGATTTGGCCCTGCTGTaGGAATCCCAGGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: PGWTRLLENSLGNYETPPDLALL*ESQVIS
Trigger: GGAAATGACCTGGGATTCCCACAGCAGGGCCAAATC...GGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGTCCACCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCGAGGAAAGGCTGATTTaGCCCTGCTGTGGGAATCCC +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVAEERLI*PCCGNP
Trigger: GGGATTCCCACAGCAGGGCCAAATCAGCCTTTCCTC...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp AGAGAAGCAAATCCTTTCCTGAAAACCTGGTCACTAATCCTGGGTGGACCAGGTGAGGAAAGGCTGATTTaGCCCTGCTGTGGGAATCCC +
Preference number: 4 (lower is better)
Translates to: REANPFLKTWSLILGGPGEERLI*PCCGNP
Trigger: GGGATTCCCACAGCAGGGCCAAATCAGCCTTTCCTC...ACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGGATTTGCTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp CCAGCAGGTCACTGGACTAGGTGCTCTATACCAGTTAGGACTGTTAATTTGCACGAGGAAAGGCTGATTTaGCCCTGCTGTGGGAATCCC +
Preference number: 4 (lower is better)
Translates to: PAGHWTRCSIPVRTVNLHEERLI*PCCGNP
Trigger: GGGATTCCCACAGCAGGGCCAAATCAGCCTTTCCTC...GTGCAAATTAACAGTCCTAACTGGTATAGAGCACCTAGTCCAGTGACCTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp AAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTAACCCGCAGCAGACACAGCAGTaGATGCTGAACTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: KLLLSFNCWGRAVCESNPQQTQQ*MLNSWG
Trigger: ACCCCAAGAGTTCAGCATCCACTGCTGTGTCTGCTG...CGGGTTACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCGAAACTCCTTCTCTGTaGGGGCAGCAGACACAGCAG +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVAETPSL*GQQTQQ
Trigger: CTGCTGTGTCTGCTGCCCCCACAGAGAAGGAGTTTC...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp AAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTAACCCGCCGTTGGTGCCAGTCTaGCCCTTCAAATGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: KLLLSFNCWGRAVCESNPPLVPV*PFKCCC
Trigger: ACAGCAACATTTGAAGGGCCAGACTGGCACCAACGG...CGGGTTACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp CCAGCAGGTCACTGGACTAGGTGCTCTATACCAGTTAGGACTGTTAATTTGCACTCACATTGCCACCGTTaGTGCCAGTCTGGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: PAGHWTRCSIPVRTVNLHSHCHR*CQSGPS
Trigger: TGAAGGGCCAGACTGGCACCAACGGTGGCAATGTGA...GTGCAAATTAACAGTCCTAACTGGTATAGAGCACCTAGTCCAGTGACCTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCTCACATTGCCACCGTTaGTGCCAGTCTGGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVASHCHR*CQSGPS
Trigger: TGAAGGGCCAGACTGGCACCAACGGTGGCAATGTGA...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTTCACATTGCCACCGTTaGTGCCAGTCTGGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESSHCHR*CQSGPS
Trigger: TGAAGGGCCAGACTGGCACCAACGGTGGCAATGTGA...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp AAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTAACCCGACACCAGGCAGAGTTTaGGAGGTGGTCCTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: KLLLSFNCWGRAVCESNPTPGRV*EVVLLL
Trigger: CAACAACAGGACCACCTCCCAAACTCTGCCTGGTGT...CGGGTTACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp CCAGCAGGTCACTGGACTAGGTGCTCTATACCAGTTAGGACTGTTAATTTGCACAACCGCTGCCAGTTCTaGCTGGAGTTTCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: PAGHWTRCSIPVRTVNLHNRCQF*LEFPSL
Trigger: GAGGGAAGGAAACTCCAGCCAGAACTGGCAGCGGTT...GTGCAAATTAACAGTCCTAACTGGTATAGAGCACCTAGTCCAGTGACCTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCCGTGGCTTTCCTTCATaGCATGCCCAGAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVARGFPS*HAQSSS
Trigger: GGATGAGCTCTGGGCATGCCATGAAGGAAAGCCACG...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTATCAACTGGTCTCTCTaGGGCGGCGTTAAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSINWSL*GGVKRA
Trigger: GGCCCTCTTAACGCCGCCCCAGAGAGACCAGTTGAT...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394466.6
CDS-3UTR TCA 90 bp ACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTACATCTCCCCTCTCCTaGGCAAGCACACTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TRLLENSLGNYETPPKGFTSPLS*ASTLLG
Trigger: CCCCAGCAGTGTGCTTGCTCAGGAGAGGGGAGATGT...AAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACTCGCTGCTTGGAGTCTaGTTGAGAAGCGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHSLLGV*LRSDSQ
Trigger: CTGGCTGTCGCTTCTCAATCAGACTCCAAGCAGCGA...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR TCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTCACAGCAGTGGATGCTaGACTCTTGGGGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSHSSGC*TLGVLW
Trigger: CCAGAGAACCCCAAGAGTTCAGCATCCACTGCTGTG...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCTCCTGTTGTTGCTGTTaGGGAGCTGGATGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVASCCCC*GAGWRR
Trigger: TCTCCTCCATCCAGCTCCTCAACAGCAACAACAGGA...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTTCCTGTTGTTGCTGTTaGGGAGCTGGATGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESSCCCC*GAGWRR
Trigger: TCTCCTCCATCCAGCTCCTCAACAGCAACAACAGGA...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAATAACCTCCAACAGTaGCACCAGGGTAGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVANNLQQ*HQGRGE
Trigger: CTCACCCCTACCCTGGTGTCACTGTTGGAGGTTATT...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR TCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTCCTGCCTCTGAATTCTaGAGGGAGCGTGGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSPASEF*RERGFP
Trigger: AGGAAAGCCACGCTCCCTTCAGAATTCAGAGGCAGG...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR TCA 90 bp TTTCCTTCATGGCATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATCCTGCCTCTGAATTCTaGAGGGAGCGTGGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: FPSWHAQSSSHANYPALHPASEF*RERGFP
Trigger: AGGAAAGCCACGCTCCCTTCAGAATTCAGAGGCAGG...ATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATGCCATGAAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTGACAGATCTGGCTGCTaGGCATTGCTTACTGAGCCT +
Preference number: 4 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESDRSGC*ALLTEP
Trigger: AGGCTCAGTAAGCAATGCGCAGCAGCCAGATCTGTC...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR GCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCGACAGATCTGGCTGCTaGGCATTGCTTACTGAGCCT +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVADRSGC*ALLTEP
Trigger: AGGCTCAGTAAGCAATGCGCAGCAGCCAGATCTGTC...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR GCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACAGGCTGATTTGGCCCTaGTGTGGGAATCCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHRLIWP*CGNPRS
Trigger: TGACCTGGGATTCCCACAGCAGGGCCAAATCAGCCT...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR GCA 90 bp TTTCCTTCATGGCATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATTGCCCATTTCACTGCTaGAATCACTTGCCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: FPSWHAQSSSHANYPALHCPFHC*NHLPPS
Trigger: GGAGGGCGGCAAGTGATTGCAGCAGTGAAATGGGCA...ATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATGCCATGAAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTTGCCCATTTCACTGCTaGAATCACTTGCCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSCPFHC*NHLPPS
Trigger: GGAGGGCGGCAAGTGATTGCAGCAGTGAAATGGGCA...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR GCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCCTTTGCCCATTTCACTaGTGCAATCACTTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVALCPFH*CNHLPP
Trigger: GGGCGGCAAGTGATTGCAGCAGTGAAATGGGCAAAG...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR GCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACCTGTGGCACACAAACTaGACCTGCCTCTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHLWHTN*TCLCSS
Trigger: ACTGCTGCAGAGGCAGGTGCAGTTTGTGTGCCACAG...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS-3UTR GCA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTCTTTCCTTCATGGCATaGCCAGAGCTCATCCCATGC +
Preference number: 4 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESLSFMA*PELIPC
Trigger: GCATGGGATGAGCTCTGGGCATGCCATGAAGGAAAG...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTCCCTTTCTCCATGGGTaGGGGGAGAGCCCCTATTTA +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSPFLHG*GESPYL
Trigger: TAAATAGGGGCTCTCCCCCCACCCATGGAGAAAGGG...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000231509.7
ENST00000394464.7
CDS-3UTR CCA 90 bp AGAGAAGCAAATCCTTTCCTGAAAACCTGGTCACTAATCCTGGGTGGACCAGGTGATTTGGCCCTGCTGTaGGAATCCCAGGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: REANPFLKTWSLILGGPGDLALL*ESQVIS
Trigger: GGAAATGACCTGGGATTCCCACAGCAGGGCCAAATC...ACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGGATTTGCTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCGATTTGGCCCTGCTGTaGGAATCCCAGGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVADLALL*ESQVIS
Trigger: GGAAATGACCTGGGATTCCCACAGCAGGGCCAAATC...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACGAGGAAAGGCTGATTTaGCCCTGCTGTGGGAATCCC +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHEERLI*PCCGNP
Trigger: GGGATTCCCACAGCAGGGCCAAATCAGCCTTTCCTC...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR CCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTGAAACTCCTTCTCTGTaGGGGCAGCAGACACAGCAG +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSETPSL*GQQTQQ
Trigger: CTGCTGTGTCTGCTGCCCCCACAGAGAAGGAGTTTC...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACGAAACTCCTTCTCTGTaGGGGCAGCAGACACAGCAG +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHETPSL*GQQTQQ
Trigger: CTGCTGTGTCTGCTGCCCCCACAGAGAAGGAGTTTC...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR CCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCCCGTTGGTGCCAGTCTaGCCCTTCAAATGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVAPLVPV*PFKCCC
Trigger: ACAGCAACATTTGAAGGGCCAGACTGGCACCAACGG...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTTCACATTGCCACCGTTaGTGCCAGTCTGGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSSHCHR*CQSGPS
Trigger: TGAAGGGCCAGACTGGCACCAACGGTGGCAATGTGA...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACAACCGCTGCCAGTTCTaGCTGGAGTTTCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHNRCQF*LEFPSL
Trigger: GAGGGAAGGAAACTCCAGCCAGAACTGGCAGCGGTT...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR CCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTAACCGCTGCCAGTTCTaGCTGGAGTTTCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSNRCQF*LEFPSL
Trigger: GAGGGAAGGAAACTCCAGCCAGAACTGGCAGCGGTT...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp AAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTAACCCGGACTTTGGGCACTGGTaGTTTAGGTGCCATCCTTCT +
Preference number: 4 (lower is better)
Translates to: KLLLSFNCWGRAVCESNPDFGHW*FRCHPS
Trigger: AGAAGGATGGCACCTAAACCACCAGTGCCCAAAGTC...CGGGTTACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACAGTCGTCACAGAAGCTaGCCCCTTTCCTGGGCTAAC +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHSRHRS*PLSWAN
Trigger: GTTAGCCCAGGAAAGGGGCCAGCTTCTGTGACGACT...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS-3UTR TCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTTGCTTGGAGTCTGATTaGGAAGCGACAGCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSCLESD*EATASE
Trigger: CTCACTGGCTGTCGCTTCTCAATCAGACTCCAAGCA...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACTGCTTGGAGTCTGATTaGGAAGCGACAGCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHCLESD*EATASE
Trigger: CTCACTGGCTGTCGCTTCTCAATCAGACTCCAAGCA...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR TCA 90 bp CATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATAGACACAAATCATCGCTGCTTGGAGTCTaGTTGAGAAGCGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: HAQSSSHANYPALHRHKSSLLGV*LRSDSQ
Trigger: CTGGCTGTCGCTTCTCAATCAGACTCCAAGCAGCGA...TGATTTGTGTCTATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTTCGCTGCTTGGAGTCTaGTTGAGAAGCGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRISLLGV*LRSDSQ
Trigger: CTGGCTGTCGCTTCTCAATCAGACTCCAAGCAGCGA...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTCACAGCAGTGGATGCTaGACTCTTGGGGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIHSSGC*TLGVLW
Trigger: CCAGAGAACCCCAAGAGTTCAGCATCCACTGCTGTG...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTTCCTGTTGTTGCTGTTaGGGAGCTGGATGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSSCCCC*GAGWRR
Trigger: TCTCCTCCATCCAGCTCCTCAACAGCAACAACAGGA...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp CAAAAACACATTCACCTACAGCTACAGTCAGGGAGTGACCAGCCAAGATGGAAATCCTGTTGTTGCTGTTaGGGAGCTGGATGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: QKHIHLQLQSGSDQPRWKSCCCC*GAGWRR
Trigger: TCTCCTCCATCCAGCTCCTCAACAGCAACAACAGGA...TTTCCATCTTGGCTGGTCACTCCCTGACTGTAGCTGTAGGTGAATGTGTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp TTTCCTTCATGGCATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATAATAACCTCCAACAGTaGCACCAGGGTAGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: FPSWHAQSSSHANYPALHNNLQQ*HQGRGE
Trigger: CTCACCCCTACCCTGGTGTCACTGTTGGAGGTTATT...ATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATGCCATGAAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACAATAACCTCCAACAGTaGCACCAGGGTAGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHNNLQQ*HQGRGE
Trigger: CTCACCCCTACCCTGGTGTCACTGTTGGAGGTTATT...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR TCA 90 bp CCAGCAGGTCACTGGACTAGGTGCTCTATACCAGTTAGGACTGTTAATTTGCACGGTGCCATCCTTCTTTaGCTGTGGAGATTACGTCCA +
Preference number: 4 (lower is better)
Translates to: PAGHWTRCSIPVRTVNLHGAILL*LWRLRP
Trigger: TGGACGTAATCTCCACAGTCAAAGAAGGATGGCACC...GTGCAAATTAACAGTCCTAACTGGTATAGAGCACCTAGTCCAGTGACCTGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCGGTGCCATCCTTCTTTaGCTGTGGAGATTACGTCCA +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVAGAILL*LWRLRP
Trigger: TGGACGTAATCTCCACAGTCAAAGAAGGATGGCACC...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCGACTCACTGTTGGAATaGGAAGGGTGGTCAGAATGG +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVADSLLE*EGWSEW
Trigger: CCATTCTGACCACCCTTCTCATTCCAACAGTGAGTC...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp AAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTAACCCGAGATGGAAATCTCACTaGAGGCTACCATGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: KLLLSFNCWGRAVCESNPRWKSH*RLPWFW
Trigger: CCAGAACCATGGTAGCCTTCAGTGAGATTTCCATCT...CGGGTTACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR GCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACAAGAAAGTCTCCCATTaGCCAGCTGACAAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHKKVSH*PADKPA
Trigger: GGCTGGCTTGTCAGCTGGGCAATGGGAGACTTTCTT...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231509.7
ENST00000394464.7
CDS-3UTR GCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCCTGGCTGCTGCGCATTaGTTACTGAGCCTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVALAAAH*LLSLLE
Trigger: TTCCAAAAGGCTCAGTAAGCAATGCGCAGCAGCCAG...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR GCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTGACAGATCTGGCTGCTaGGCATTGCTTACTGAGCCT +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSDRSGC*ALLTEP
Trigger: AGGCTCAGTAAGCAATGCGCAGCAGCCAGATCTGTC...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR GCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACGACAGATCTGGCTGCTaGGCATTGCTTACTGAGCCT +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHDRSGC*ALLTEP
Trigger: AGGCTCAGTAAGCAATGCGCAGCAGCCAGATCTGTC...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR GCA 90 bp CAAAAACACATTCACCTACAGCTACAGTCAGGGAGTGACCAGCCAAGATGGAAAGACAGATCTGGCTGCTaGGCATTGCTTACTGAGCCT +
Preference number: 4 (lower is better)
Translates to: QKHIHLQLQSGSDQPRWKDRSGC*ALLTEP
Trigger: AGGCTCAGTAAGCAATGCGCAGCAGCCAGATCTGTC...TTTCCATCTTGGCTGGTCACTCCCTGACTGTAGCTGTAGGTGAATGTGTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCTTGGACAGATCTGGCTaGTGCGCATTGCTTACTGAG +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVALDRSG*CALLTE
Trigger: CTCAGTAAGCAATGCGCAGCAGCCAGATCTGTCCAA...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR GCA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTTTGGACAGATCTGGCTaGTGCGCATTGCTTACTGAG +
Preference number: 4 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESLDRSG*CALLTE
Trigger: CTCAGTAAGCAATGCGCAGCAGCCAGATCTGTCCAA...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR GCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTAGGCTGATTTGGCCCTaGTGTGGGAATCCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIRLIWP*CGNPRS
Trigger: TGACCTGGGATTCCCACAGCAGGGCCAAATCAGCCT...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR GCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTCATTGCCACCGTTGGTaGCAGTCTGGCCCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSHCHRW*QSGPSN
Trigger: ATTTGAAGGGCCAGACTGGCACCAACGGTGGCAATG...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR GCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACCATTGCCACCGTTGGTaGCAGTCTGGCCCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHHCHRW*QSGPSN
Trigger: ATTTGAAGGGCCAGACTGGCACCAACGGTGGCAATG...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR GCA 90 bp CCAGCAGGTCACTGGACTAGGTGCTCTATACCAGTTAGGACTGTTAATTTGCACACTGCTGCAATCACTTaGCGCCCTCCTAACATGTTG +
Preference number: 4 (lower is better)
Translates to: PAGHWTRCSIPVRTVNLHTAAIT*RPPNML
Trigger: CAACATGTTAGGAGGGCGGCAAGTGATTGCAGCAGT...GTGCAAATTAACAGTCCTAACTGGTATAGAGCACCTAGTCCAGTGACCTGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR GCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCACTGCTGCAATCACTTaGCGCCCTCCTAACATGTTG +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVATAAIT*RPPNML
Trigger: CAACATGTTAGGAGGGCGGCAAGTGATTGCAGCAGT...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR GCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTTGCCCATTTCACTGCTaGAATCACTTGCCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRICPFHC*NHLPPS
Trigger: GGAGGGCGGCAAGTGATTGCAGCAGTGAAATGGGCA...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR GCA 90 bp CATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATAGACACAAATCATGCCCATTTCACTGCTaGAATCACTTGCCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: HAQSSSHANYPALHRHKSCPFHC*NHLPPS
Trigger: GGAGGGCGGCAAGTGATTGCAGCAGTGAAATGGGCA...TGATTTGTGTCTATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACCTTTGCCCATTTCACTaGTGCAATCACTTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHLCPFH*CNHLPP
Trigger: GGGCGGCAAGTGATTGCAGCAGTGAAATGGGCAAAG...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR GCA 90 bp CAAAAACACATTCACCTACAGCTACAGTCAGGGAGTGACCAGCCAAGATGGAAACTTTGCCCATTTCACTaGTGCAATCACTTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: QKHIHLQLQSGSDQPRWKLCPFH*CNHLPP
Trigger: GGGCGGCAAGTGATTGCAGCAGTGAAATGGGCAAAG...TTTCCATCTTGGCTGGTCACTCCCTGACTGTAGCTGTAGGTGAATGTGTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTCTTTGCCCATTTCACTaGTGCAATCACTTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSLCPFH*CNHLPP
Trigger: GGGCGGCAAGTGATTGCAGCAGTGAAATGGGCAAAG...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR GCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTTTCCTTCCCCACTCATaGCCCAGTGCTTCCGTTGGA +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIFLPHS*PSASVG
Trigger: TCCAACGGAAGCACTGGGGCATGAGTGGGGAAGGAA...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS-3UTR GCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCGAGGAGGGTAGGAGCTaGATTTTGTTCCTCCCCATT +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVAEEGRS*ILFLPI
Trigger: AATGGGGAGGAACAAAATGCAGCTCCTACCCTCCTC...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000504572.5
CDS-3UTR GCA 90 bp CCTGGGTGGACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCGGTCACTGGACTAGGTaGTCTATACCAGTTAGGACT +
Preference number: 4 (lower is better)
Translates to: PGWTRLLENSLGNYETPPGHWTR*SIPVRT
Trigger: AGTCCTAACTGGTATAGAGCACCTAGTCCAGTGACC...GGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGTCCACCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCTGCTTTGGACAGATCTaGCTGCTGCGCATTGCTTAC +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVACFGQI*LLRIAY
Trigger: GTAAGCAATGCGCAGCAGCCAGATCTGTCCAAAGCA...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp AGAGAAGCAAATCCTTTCCTGAAAACCTGGTCACTAATCCTGGGTGGACCAGGTTGCTTTGGACAGATCTaGCTGCTGCGCATTGCTTAC +
Preference number: 4 (lower is better)
Translates to: REANPFLKTWSLILGGPGCFGQI*LLRIAY
Trigger: GTAAGCAATGCGCAGCAGCCAGATCTGTCCAAAGCA...ACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGGATTTGCTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp CAAACTATTGCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGATTTGGCCCTGCTGTaGGAATCCCAGGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: QTIAKLLKLLLSFNCWGRDLALL*ESQVIS
Trigger: GGAAATGACCTGGGATTCCCACAGCAGGGCCAAATC...CCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTGATTTGGCCCTGCTGTaGGAATCCCAGGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSDLALL*ESQVIS
Trigger: GGAAATGACCTGGGATTCCCACAGCAGGGCCAAATC...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCTGGATGCTGAACTCTTaGGGTTCTCTGGAACACTGG +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVAWMLNS*GSLEHW
Trigger: CCAGTGTTCCAGAGAACCCCAAGAGTTCAGCATCCA...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp CCAGCAGGTCACTGGACTAGGTGCTCTATACCAGTTAGGACTGTTAATTTGCACTGGATGCTGAACTCTTaGGGTTCTCTGGAACACTGG +
Preference number: 4 (lower is better)
Translates to: PAGHWTRCSIPVRTVNLHWMLNS*GSLEHW
Trigger: CCAGTGTTCCAGAGAACCCCAAGAGTTCAGCATCCA...GTGCAAATTAACAGTCCTAACTGGTATAGAGCACCTAGTCCAGTGACCTGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTCAGCAGACACAGCAGTaGATGCTGAACTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSQQTQQ*MLNSWG
Trigger: ACCCCAAGAGTTCAGCATCCACTGCTGTGTCTGCTG...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp CATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATAGACACAAATCAGAAACTCCTTCTCTGTaGGGGCAGCAGACACAGCAG +
Preference number: 4 (lower is better)
Translates to: HAQSSSHANYPALHRHKSETPSL*GQQTQQ
Trigger: CTGCTGTGTCTGCTGCCCCCACAGAGAAGGAGTTTC...TGATTTGTGTCTATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTCCGTTGGTGCCAGTCTaGCCCTTCAAATGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSPLVPV*PFKCCC
Trigger: ACAGCAACATTTGAAGGGCCAGACTGGCACCAACGG...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACCCGTTGGTGCCAGTCTaGCCCTTCAAATGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHPLVPV*PFKCCC
Trigger: ACAGCAACATTTGAAGGGCCAGACTGGCACCAACGG...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR CCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTTCACATTGCCACCGTTaGTGCCAGTCTGGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRISHCHR*CQSGPS
Trigger: TGAAGGGCCAGACTGGCACCAACGGTGGCAATGTGA...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACACACCAGGCAGAGTTTaGGAGGTGGTCCTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHTPGRV*EVVLLL
Trigger: CAACAACAGGACCACCTCCCAAACTCTGCCTGGTGT...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR CCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTACACCAGGCAGAGTTTaGGAGGTGGTCCTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSTPGRV*EVVLLL
Trigger: CAACAACAGGACCACCTCCCAAACTCTGCCTGGTGT...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp CATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATAGACACAAATCAAACCGCTGCCAGTTCTaGCTGGAGTTTCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: HAQSSSHANYPALHRHKSNRCQF*LEFPSL
Trigger: GAGGGAAGGAAACTCCAGCCAGAACTGGCAGCGGTT...TGATTTGTGTCTATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTAACCGCTGCCAGTTCTaGCTGGAGTTTCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRINRCQF*LEFPSL
Trigger: GAGGGAAGGAAACTCCAGCCAGAACTGGCAGCGGTT...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCGACTTTGGGCACTGGTaGTTTAGGTGCCATCCTTCT +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVADFGHW*FRCHPS
Trigger: AGAAGGATGGCACCTAAACCACCAGTGCCCAAAGTC...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCACAGACTTTGGGCACTaGTGGTTTAGGTGCCATCCT +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVATDFGH*WFRCHP
Trigger: AGGATGGCACCTAAACCACCAGTGCCCAAAGTCTGT...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTGAAGGGTGGTCAGAATaGGAGGCAGAGGATAACTTC +
Preference number: 4 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESEGWSE*EAEDNF
Trigger: GAAGTTATCCTCTGCCTCCCATTCTGACCACCCTTC...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAACAACTTAGCTTGTaGACGCAGAAGGAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVAKQLSL*TQKEQE
Trigger: CTCCTGCTCCTTCTGCGTTCACAAGCTAAGTTGTTT...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231509.7
ENST00000394464.7
CDS-3UTR TCA 90 bp ACAGTGAAGAAATTCACAGGACTTGTGTTAAACTCTATGGCACACATTAGGGATACATCTCCCCTCTCCTaGGCAAGCACACTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TVKKFTGLVLNSMAHIRDTSPLS*ASTLLG
Trigger: CCCCAGCAGTGTGCTTGCTCAGGAGAGGGGAGATGT...ATCCCTAATGTGTGCCATAGAGTTTAACACAAGTCCTGTGAATTTCTTCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTTGCTTGGAGTCTGATTaGGAAGCGACAGCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRICLESD*EATASE
Trigger: CTCACTGGCTGTCGCTTCTCAATCAGACTCCAAGCA...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp GGATTTGTTGTGAGTAACCAACTCTCACTGAAGTTACTACAAACTTCAACAGTTCCCCCGAGGAAAGGCTaGTTTGGCCCTGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: GFVVSNQLSLKLLQTSTVPPRKG*FGPAVG
Trigger: TCCCACAGCAGGGCCAAATCAGCCTTTCCTCGGGGG...AACTGTTGAAGTTTGTAGTAACTTCAGTGAGAGTTGGTTACTCACAACAAATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp AAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTAACCCGCACTGGTCGACCTATTaGGGTTTGCAATGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: KLLLSFNCWGRAVCESNPHWSTY*GLQCFL
Trigger: AAGAAAGCATTGCAAACCTCAATAGGTCGACCAGTG...CGGGTTACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTTCCTGTTGTTGCTGTTaGGGAGCTGGATGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRISCCCC*GAGWRR
Trigger: TCTCCTCCATCCAGCTCCTCAACAGCAACAACAGGA...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp CAAAAACACATTCACCTACAGCTACAGTCAGGGAGTGACCAGCCAAGATGGAAATTCAGAGGTTTCTTGTaGGACTCCTGTAGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: QKHIHLQLQSGSDQPRWKFRGFL*DSCSGL
Trigger: CAGGCCACTACAGGAGTCTCACAAGAAACCTCTGAA...TTTCCATCTTGGCTGGTCACTCCCTGACTGTAGCTGTAGGTGAATGTGTTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTTTCAGAGGTTTCTTGTaGGACTCCTGTAGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSFRGFL*DSCSGL
Trigger: CAGGCCACTACAGGAGTCTCACAAGAAACCTCTGAA...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTAATAACCTCCAACAGTaGCACCAGGGTAGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRINNLQQ*HQGRGE
Trigger: CTCACCCCTACCCTGGTGTCACTGTTGGAGGTTATT...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR TCA 90 bp CCAGCAGGTCACTGGACTAGGTGCTCTATACCAGTTAGGACTGTTAATTTGCACCATGATCCTCCAAGTTaGGTCTGGAACAGAGCTATC +
Preference number: 4 (lower is better)
Translates to: PAGHWTRCSIPVRTVNLHHDPPS*VWNRAI
Trigger: GATAGCTCTGTTCCAGACTCAACTTGGAGGATCATG...GTGCAAATTAACAGTCCTAACTGGTATAGAGCACCTAGTCCAGTGACCTGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTCCAGGTGTAAGTTCCTaGAACCTGGTATTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESPGVSS*NLVLPL
Trigger: CAAAGGCAATACCAGGTTTCAGGAACTTACACCTGG...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp AGAGAAGCAAATCCTTTCCTGAAAACCTGGTCACTAATCCTGGGTGGACCAGGTCCAGGTGTAAGTTCCTaGAACCTGGTATTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: REANPFLKTWSLILGGPGPGVSS*NLVLPL
Trigger: CAAAGGCAATACCAGGTTTCAGGAACTTACACCTGG...ACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGGATTTGCTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCCCAGGTGTAAGTTCCTaGAACCTGGTATTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVAPGVSS*NLVLPL
Trigger: CAAAGGCAATACCAGGTTTCAGGAACTTACACCTGG...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp CCTGGGTGGACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCAGTTTCCTTCCCTCTTaGCAATGGCTTTTCCTAGCT +
Preference number: 4 (lower is better)
Translates to: PGWTRLLENSLGNYETPPSFLPS*QWLFLA
Trigger: AGCTAGGAAAAGCCATTGTCAAGAGGGAAGGAAACT...GGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGTCCACCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTTCAGCTCAGAGCCACTaGTTCAGCAGATATTCCCCC +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRISAQSH*FSRYSP
Trigger: GGGGGAATATCTGCTGAATCAGTGGCTCTGAGCTGA...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS-3UTR TCA 90 bp AGAGAAGCAAATCCTTTCCTGAAAACCTGGTCACTAATCCTGGGTGGACCAGGTAGATGGAAATCTCACTaGAGGCTACCATGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: REANPFLKTWSLILGGPGRWKSH*RLPWFW
Trigger: CCAGAACCATGGTAGCCTTCAGTGAGATTTCCATCT...ACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGGATTTGCTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACCTGGCTGCTGCGCATTaGTTACTGAGCCTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHLAAAH*LLSLLE
Trigger: TTCCAAAAGGCTCAGTAAGCAATGCGCAGCAGCCAG...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR GCA 90 bp CAAACTATTGCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGCTGGCTGCTGCGCATTaGTTACTGAGCCTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: QTIAKLLKLLLSFNCWGRLAAAH*LLSLLE
Trigger: TTCCAAAAGGCTCAGTAAGCAATGCGCAGCAGCCAG...CCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR GCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACTTGGACAGATCTGGCTaGTGCGCATTGCTTACTGAG +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHLDRSG*CALLTE
Trigger: CTCAGTAAGCAATGCGCAGCAGCCAGATCTGTCCAA...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR GCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTCATTGCCACCGTTGGTaGCAGTCTGGCCCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIHCHRW*QSGPSN
Trigger: ATTTGAAGGGCCAGACTGGCACCAACGGTGGCAATG...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR GCA 90 bp AAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTAACCCGTTACATCTGGTCTCATaGTGGGGCTTGAATAGCCAT +
Preference number: 4 (lower is better)
Translates to: KLLLSFNCWGRAVCESNPLHLVS*WGLNSH
Trigger: ATGGCTATTCAAGCCCCAGCATGAGACCAGATGTAA...CGGGTTACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR GCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTCTTTGCCCATTTCACTaGTGCAATCACTTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRILCPFH*CNHLPP
Trigger: GGGCGGCAAGTGATTGCAGCAGTGAAATGGGCAAAG...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR GCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCCCACCCCAGAGCAAATaGCATAAGAAACATCCAGGA +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVAPPQSK*HKKHPG
Trigger: TCCTGGATGTTTCTTATGGCATTTGCTCTGGGGTGG...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR GCA 90 bp ATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTAAAGTGTCCTCCTTACCACACAAACTGCACCTaGCTCTGCAGCAGTCGTCAC +
Preference number: 4 (lower is better)
Translates to: IVWEITKLHPKGLKCPPYHTNCT*LCSSRH
Trigger: GTGACGACTGCTGCAGAGGCAGGTGCAGTTTGTGTG...GTAAGGAGGACACTTTAAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS-3UTR GCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTGAGGAGGGTAGGAGCTaGATTTTGTTCCTCCCCATT +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSEEGRS*ILFLPI
Trigger: AATGGGGAGGAACAAAATGCAGCTCCTACCCTCCTC...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000504572.5
CDS-3UTR GCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCGGTCACTGGACTAGGTaGTCTATACCAGTTAGGACT +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVAGHWTR*SIPVRT
Trigger: AGTCCTAACTGGTATAGAGCACCTAGTCCAGTGACC...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR GCA 90 bp TTTCCTTCATGGCATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATCTGTTGTCATTCAACTaGTGGGGGAGGGCTGTATGT +
Preference number: 4 (lower is better)
Translates to: FPSWHAQSSSHANYPALHLLSFN*WGRAVC
Trigger: ACATACAGCCCTCCCCCAGCAGTTGAATGACAACAG...ATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATGCCATGAAGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR GCA 90 bp CAAACTATTGCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGCTGTTGTCATTCAACTaGTGGGGGAGGGCTGTATGT +
Preference number: 4 (lower is better)
Translates to: QTIAKLLKLLLSFNCWGRLLSFN*WGRAVC
Trigger: ACATACAGCCCTCCCCCAGCAGTTGAATGACAACAG...CCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp CAAACTATTGCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGTGCTTTGGACAGATCTaGCTGCTGCGCATTGCTTAC +
Preference number: 4 (lower is better)
Translates to: QTIAKLLKLLLSFNCWGRCFGQI*LLRIAY
Trigger: GTAAGCAATGCGCAGCAGCCAGATCTGTCCAAAGCA...CCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTTGCTTTGGACAGATCTaGCTGCTGCGCATTGCTTAC +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSCFGQI*LLRIAY
Trigger: GTAAGCAATGCGCAGCAGCCAGATCTGTCCAAAGCA...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACAGAGTGAAACTGCTTTaGACAGATCTGGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHRVKLL*TDLAAA
Trigger: CGCAGCAGCCAGATCTGTCCAAAGCAGTTTCACTCT...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR CCA 90 bp CAAACTATTGCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGAGAGTGAAACTGCTTTaGACAGATCTGGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: QTIAKLLKLLLSFNCWGRRVKLL*TDLAAA
Trigger: CGCAGCAGCCAGATCTGTCCAAAGCAGTTTCACTCT...CCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTAGAGTGAAACTGCTTTaGACAGATCTGGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSRVKLL*TDLAAA
Trigger: CGCAGCAGCCAGATCTGTCCAAAGCAGTTTCACTCT...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTGATTTGGCCCTGCTGTaGGAATCCCAGGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIDLALL*ESQVIS
Trigger: GGAAATGACCTGGGATTCCCACAGCAGGGCCAAATC...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp ATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTAAAGTGTCCTCCTTACGAGGAAAGGCTGATTTaGCCCTGCTGTGGGAATCCC +
Preference number: 4 (lower is better)
Translates to: IVWEITKLHPKGLKCPPYEERLI*PCCGNP
Trigger: GGGATTCCCACAGCAGGGCCAAATCAGCCTTTCCTC...GTAAGGAGGACACTTTAAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCACTCTTGGGGTTCTCTaGAACACTGGTCGACCTATT +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVATLGVL*NTGRPI
Trigger: AATAGGTCGACCAGTGTTCCAGAGAACCCCAAGAGT...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTTGGATGCTGAACTCTTaGGGTTCTCTGGAACACTGG +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSWMLNS*GSLEHW
Trigger: CCAGTGTTCCAGAGAACCCCAAGAGTTCAGCATCCA...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTCAGCAGACACAGCAGTaGATGCTGAACTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIQQTQQ*MLNSWG
Trigger: ACCCCAAGAGTTCAGCATCCACTGCTGTGTCTGCTG...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp CATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATAGACACAAATCACAGCAGACACAGCAGTaGATGCTGAACTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: HAQSSSHANYPALHRHKSQQTQQ*MLNSWG
Trigger: ACCCCAAGAGTTCAGCATCCACTGCTGTGTCTGCTG...TGATTTGTGTCTATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp ATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTAAAGTGTCCTCCTTACGAAACTCCTTCTCTGTaGGGGCAGCAGACACAGCAG +
Preference number: 4 (lower is better)
Translates to: IVWEITKLHPKGLKCPPYETPSL*GQQTQQ
Trigger: CTGCTGTGTCTGCTGCCCCCACAGAGAAGGAGTTTC...GTAAGGAGGACACTTTAAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTCCGTTGGTGCCAGTCTaGCCCTTCAAATGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIPLVPV*PFKCCC
Trigger: ACAGCAACATTTGAAGGGCCAGACTGGCACCAACGG...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp CCTGGGTGGACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCATTCGTCTCTTTACCTaGGGACCCAGAAGAAAACTC +
Preference number: 4 (lower is better)
Translates to: PGWTRLLENSLGNYETPPIRLFT*GPRRKL
Trigger: GAGTTTTCTTCTGGGTCCCCAGGTAAAGAGACGAAT...GGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGTCCACCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCTTGCTGTTGAGGAGCTaGATGGAGGAGAGCTTACAT +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVALLLRS*MEESLH
Trigger: ATGTAAGCTCTCCTCCATCCAGCTCCTCAACAGCAA...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTTTGCTGTTGAGGAGCTaGATGGAGGAGAGCTTACAT +
Preference number: 4 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESLLLRS*MEESLH
Trigger: ATGTAAGCTCTCCTCCATCCAGCTCCTCAACAGCAA...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp AGAGAAGCAAATCCTTTCCTGAAAACCTGGTCACTAATCCTGGGTGGACCAGGTTTGCTGTTGAGGAGCTaGATGGAGGAGAGCTTACAT +
Preference number: 4 (lower is better)
Translates to: REANPFLKTWSLILGGPGLLLRS*MEESLH
Trigger: ATGTAAGCTCTCCTCCATCCAGCTCCTCAACAGCAA...ACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGGATTTGCTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTACACCAGGCAGAGTTTaGGAGGTGGTCCTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRITPGRV*EVVLLL
Trigger: CAACAACAGGACCACCTCCCAAACTCTGCCTGGTGT...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTGACTTTGGGCACTGGTaGTTTAGGTGCCATCCTTCT +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSDFGHW*FRCHPS
Trigger: AGAAGGATGGCACCTAAACCACCAGTGCCCAAAGTC...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp TTTCCTTCATGGCATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATACAGACTTTGGGCACTaGTGGTTTAGGTGCCATCCT +
Preference number: 4 (lower is better)
Translates to: FPSWHAQSSSHANYPALHTDFGH*WFRCHP
Trigger: AGGATGGCACCTAAACCACCAGTGCCCAAAGTCTGT...ATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATGCCATGAAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACACAGACTTTGGGCACTaGTGGTTTAGGTGCCATCCT +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHTDFGH*WFRCHP
Trigger: AGGATGGCACCTAAACCACCAGTGCCCAAAGTCTGT...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR CCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTACAGACTTTGGGCACTaGTGGTTTAGGTGCCATCCT +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSTDFGH*WFRCHP
Trigger: AGGATGGCACCTAAACCACCAGTGCCCAAAGTCTGT...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp AGAGAAGCAAATCCTTTCCTGAAAACCTGGTCACTAATCCTGGGTGGACCAGGTTTGTCATTCAACTGCTaGGGGAGGGCTGTATGTGAA +
Preference number: 4 (lower is better)
Translates to: REANPFLKTWSLILGGPGLSFNC*GRAVCE
Trigger: TTCACATACAGCCCTCCCCCAGCAGTTGAATGACAA...ACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGGATTTGCTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CCA 90 bp ACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTCGTGGCTTTCCTTCATaGCATGCCCAGAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: TRLLENSLGNYETPPKGFRGFPS*HAQSSS
Trigger: GGATGAGCTCTGGGCATGCCATGAAGGAAAGCCACG...AAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp CCTGGGTGGACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCGTCACTAATCCTGGGTaGACCAGGTTGCTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: PGWTRLLENSLGNYETPPVTNPG*TRLLEN
Trigger: ATTTTCAAGCAACCTGGTCCACCCAGGATTAGTGAC...GGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGTCCACCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTCCTTTCCTGAAAACCTaGTCACTAATCCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESPFLKT*SLILGG
Trigger: TCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGG...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR TCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTAAACAACTTAGCTTGTaGACGCAGAAGGAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSKQLSL*TQKEQE
Trigger: CTCCTGCTCCTTCTGCGTTCACAAGCTAAGTTGTTT...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231509.7
ENST00000394464.7
CDS-3UTR TCA 90 bp TTTCCTTCATGGCATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATAAACAACTTAGCTTGTaGACGCAGAAGGAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: FPSWHAQSSSHANYPALHKQLSL*TQKEQE
Trigger: CTCCTGCTCCTTCTGCGTTCACAAGCTAAGTTGTTT...ATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATGCCATGAAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp ACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTTGCTTGGAGTCTGATTaGGAAGCGACAGCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: TRLLENSLGNYETPPKGFCLESD*EATASE
Trigger: CTCACTGGCTGTCGCTTCTCAATCAGACTCCAAGCA...AAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp CAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATCAGTCGCTGCTTGGAGTCTaGTTGAGAAGCGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: QLLFPFNEKPPIVVDEHQSLLGV*LRSDSQ
Trigger: CTGGCTGTCGCTTCTCAATCAGACTCCAAGCAGCGA...CTGATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCCTGCGCATTGCTTACTaGGCCTTTTGGAAAATCAAC +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVALRIAY*AFWKIN
Trigger: GTTGATTTTCCAAAAGGCTCAGTAAGCAATGCGCAG...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp TCTATACCAGTTAGGACTGTTAATTTGCACAACCTATATAATTCTCCACTGAAGCCCCCGAGGAAAGGCTaGTTTGGCCCTGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: SIPVRTVNLHNLYNSPLKPPRKG*FGPAVG
Trigger: TCCCACAGCAGGGCCAAATCAGCCTTTCCTCGGGGG...CTTCAGTGGAGAATTATATAGGTTGTGCAAATTAACAGTCCTAACTGGTATAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp ACTACTTCAAAAGGTCCTGAAAGACAAATAGTTTACCAGCTTTCTTGCCATATACCCCCGAGGAAAGGCTaGTTTGGCCCTGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: TTSKGPERQIVYQLSCHIPPRKG*FGPAVG
Trigger: TCCCACAGCAGGGCCAAATCAGCCTTTCCTCGGGGG...TATATGGCAAGAAAGCTGGTAAACTATTTGTCTTTCAGGACCTTTTGAAGTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp CCAGCAGGTCACTGGACTAGGTGCTCTATACCAGTTAGGACTGTTAATTTGCACCACTGGTCGACCTATTaGGGTTTGCAATGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: PAGHWTRCSIPVRTVNLHHWSTY*GLQCFL
Trigger: AAGAAAGCATTGCAAACCTCAATAGGTCGACCAGTG...GTGCAAATTAACAGTCCTAACTGGTATAGAGCACCTAGTCCAGTGACCTGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCCACTGGTCGACCTATTaGGGTTTGCAATGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVAHWSTY*GLQCFL
Trigger: AAGAAAGCATTGCAAACCTCAATAGGTCGACCAGTG...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTTTCAGAGGTTTCTTGTaGGACTCCTGTAGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIFRGFL*DSCSGL
Trigger: CAGGCCACTACAGGAGTCTCACAAGAAACCTCTGAA...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTCATGATCCTCCAAGTTaGGTCTGGAACAGAGCTATC +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSHDPPS*VWNRAI
Trigger: GATAGCTCTGTTCCAGACTCAACTTGGAGGATCATG...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACCATGATCCTCCAAGTTaGGTCTGGAACAGAGCTATC +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHHDPPS*VWNRAI
Trigger: GATAGCTCTGTTCCAGACTCAACTTGGAGGATCATG...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR TCA 90 bp TTTCCTTCATGGCATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATCCAGGTGTAAGTTCCTaGAACCTGGTATTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: FPSWHAQSSSHANYPALHPGVSS*NLVLPL
Trigger: CAAAGGCAATACCAGGTTTCAGGAACTTACACCTGG...ATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATGCCATGAAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTCCAGGTGTAAGTTCCTaGAACCTGGTATTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSPGVSS*NLVLPL
Trigger: CAAAGGCAATACCAGGTTTCAGGAACTTACACCTGG...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCCTACTCTCCCATCACTaGAAAGTGATGACGACTCAA +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVALLSHH*KVMTTQ
Trigger: TTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAG...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTGGTGCCATCCTTCTTTaGCTGTGGAGATTACGTCCA +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIGAILL*LWRLRP
Trigger: TGGACGTAATCTCCACAGTCAAAGAAGGATGGCACC...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp CATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATAGACACAAATCACGGTCCTGCAGGGCTTaGAAGATTTCTGACCTTCTA +
Preference number: 4 (lower is better)
Translates to: HAQSSSHANYPALHRHKSRSCRA*KISDLL
Trigger: TAGAAGGTCAGAAATCTTTCAAGCCCTGCAGGACCG...TGATTTGTGTCTATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS-3UTR TCA 90 bp CCAGCAGGTCACTGGACTAGGTGCTCTATACCAGTTAGGACTGTTAATTTGCACAAACTGTTTGGTTTCTaGGACCATCGCTGCCTGTAT +
Preference number: 4 (lower is better)
Translates to: PAGHWTRCSIPVRTVNLHKLFGF*DHRCLY
Trigger: ATACAGGCAGCGATGGTCTCAGAAACCAAACAGTTT...GTGCAAATTAACAGTCCTAACTGGTATAGAGCACCTAGTCCAGTGACCTGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp CAAAAACACATTCACCTACAGCTACAGTCAGGGAGTGACCAGCCAAGATGGAAAAGATGGAAATCTCACTaGAGGCTACCATGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: QKHIHLQLQSGSDQPRWKRWKSH*RLPWFW
Trigger: CCAGAACCATGGTAGCCTTCAGTGAGATTTCCATCT...TTTCCATCTTGGCTGGTCACTCCCTGACTGTAGCTGTAGGTGAATGTGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTCTGGCTGCTGCGCATTaGTTACTGAGCCTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRILAAAH*LLSLLE
Trigger: TTCCAAAAGGCTCAGTAAGCAATGCGCAGCAGCCAG...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR GCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTTTGGACAGATCTGGCTaGTGCGCATTGCTTACTGAG +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRILDRSG*CALLTE
Trigger: CTCAGTAAGCAATGCGCAGCAGCCAGATCTGTCCAA...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR GCA 90 bp GCACAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATAGGCTGATTTGGCCCTaGTGTGGGAATCCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: AQLLFPFNEKPPIVVDEHRLIWP*CGNPRS
Trigger: TGACCTGGGATTCCCACAGCAGGGCCAAATCAGCCT...ATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp ATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTAAAGTGTCCTCCTTACCATTGCCACCGTTGGTaGCAGTCTGGCCCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: IVWEITKLHPKGLKCPPYHCHRW*QSGPSN
Trigger: ATTTGAAGGGCCAGACTGGCACCAACGGTGGCAATG...GTAAGGAGGACACTTTAAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCTTACATCTGGTCTCATaGTGGGGCTTGAATAGCCAT +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVALHLVS*WGLNSH
Trigger: ATGGCTATTCAAGCCCCAGCATGAGACCAGATGTAA...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR GCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTACTGCTGCAATCACTTaGCGCCCTCCTAACATGTTG +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRITAAIT*RPPNML
Trigger: CAACATGTTAGGAGGGCGGCAAGTGATTGCAGCAGT...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR GCA 90 bp ACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTCTTTGCCCATTTCACTaGTGCAATCACTTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: TRLLENSLGNYETPPKGFLCPFH*CNHLPP
Trigger: GGGCGGCAAGTGATTGCAGCAGTGAAATGGGCAAAG...AAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAACATCCAGGAGTACTaGAGTAGGGTCATTTGGTCA +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVANIQEY*SRVIWS
Trigger: TGACCAAATGACCCTACTGCAGTACTCCTGGATGTT...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR GCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACGGTCACTGGACTAGGTaGTCTATACCAGTTAGGACT +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHGHWTR*SIPVRT
Trigger: AGTCCTAACTGGTATAGAGCACCTAGTCCAGTGACC...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR GCA 90 bp AAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTAACCCGAGAAAGTTGGTAAGGTaGACACAGAAAGGGCTACTA +
Preference number: 4 (lower is better)
Translates to: KLLLSFNCWGRAVCESNPRKLVR*TQKGLL
Trigger: TAGTAGCCCTTTCTGTGTGCACCTTACCAACTTTCT...CGGGTTACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAAGTCTTCGCTGCTTaGAGTCTGATTGAGAAGCGA +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVAKVFAA*SLIEKR
Trigger: TCGCTTCTCAATCAGACTCCAAGCAGCGAAGACTTT...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTTGCTTTGGACAGATCTaGCTGCTGCGCATTGCTTAC +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRICFGQI*LLRIAY
Trigger: GTAAGCAATGCGCAGCAGCCAGATCTGTCCAAAGCA...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTAGAGTGAAACTGCTTTaGACAGATCTGGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIRVKLL*TDLAAA
Trigger: CGCAGCAGCCAGATCTGTCCAAAGCAGTTTCACTCT...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTACTCTTGGGGTTCTCTaGAACACTGGTCGACCTATT +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSTLGVL*NTGRPI
Trigger: AATAGGTCGACCAGTGTTCCAGAGAACCCCAAGAGT...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp CATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATAGACACAAATCATGGATGCTGAACTCTTaGGGTTCTCTGGAACACTGG +
Preference number: 4 (lower is better)
Translates to: HAQSSSHANYPALHRHKSWMLNS*GSLEHW
Trigger: CCAGTGTTCCAGAGAACCCCAAGAGTTCAGCATCCA...TGATTTGTGTCTATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp AGAGAAGCAAATCCTTTCCTGAAAACCTGGTCACTAATCCTGGGTGGACCAGGTATTCGTCTCTTTACCTaGGGACCCAGAAGAAAACTC +
Preference number: 4 (lower is better)
Translates to: REANPFLKTWSLILGGPGIRLFT*GPRRKL
Trigger: GAGTTTTCTTCTGGGTCCCCAGGTAAAGAGACGAAT...ACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGGATTTGCTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTATTCGTCTCTTTACCTaGGGACCCAGAAGAAAACTC +
Preference number: 4 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESIRLFT*GPRRKL
Trigger: GAGTTTTCTTCTGGGTCCCCAGGTAAAGAGACGAAT...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCATTCGTCTCTTTACCTaGGGACCCAGAAGAAAACTC +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVAIRLFT*GPRRKL
Trigger: GAGTTTTCTTCTGGGTCCCCAGGTAAAGAGACGAAT...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp GGCATTTGGATATATATACCCCAAAAGTGTTATGTCCTAAGTGCCTCAGTTCTGAACCGCTGCCAGTTCTaGCTGGAGTTTCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: GIWIYIPQKCYVLSASVLNRCQF*LEFPSL
Trigger: GAGGGAAGGAAACTCCAGCCAGAACTGGCAGCGGTT...CAGAACTGAGGCACTTAGGACATAACACTTTTGGGGTATATATATCCAAATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTGACTTTGGGCACTGGTaGTTTAGGTGCCATCCTTCT +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIDFGHW*FRCHPS
Trigger: AGAAGGATGGCACCTAAACCACCAGTGCCCAAAGTC...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTACAGACTTTGGGCACTaGTGGTTTAGGTGCCATCCT +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRITDFGH*WFRCHP
Trigger: AGGATGGCACCTAAACCACCAGTGCCCAAAGTCTGT...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTTACCCAGCAGGTCACTaGACTAGGTGCTCTATACCA +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIYPAGH*TRCSIP
Trigger: TGGTATAGAGCACCTAGTCCAGTGACCTGCTGGGTA...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTTTGTCATTCAACTGCTaGGGGAGGGCTGTATGTGAA +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSLSFNC*GRAVCE
Trigger: TTCACATACAGCCCTCCCCCAGCAGTTGAATGACAA...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp CAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATCAGCGTGGCTTTCCTTCATaGCATGCCCAGAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: QLLFPFNEKPPIVVDEHQRGFPS*HAQSSS
Trigger: GGATGAGCTCTGGGCATGCCATGAAGGAAAGCCACG...CTGATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp AAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTAACCCGAGGCTACCATGGTTCTaGAAGTTTGACAGATCAATG +
Preference number: 4 (lower is better)
Translates to: KLLLSFNCWGRAVCESNPRLPWF*KFDRSM
Trigger: CATTGATCTGTCAAACTTCCAGAACCATGGTAGCCT...CGGGTTACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTTCAGTGAATATCAACTaGTCTCTCTGGGGCGGCGTT +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRISVNIN*SLWGGV
Trigger: AACGCCGCCCCAGAGAGACCAGTTGATATTCACTGA...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394466.6
CDS-3UTR TCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACTTTGGAGTCCATCAGTaGATATCAACTCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHFGVHQ*ISTLAE
Trigger: CTCTGCCAGAGTTGATATTCACTGATGGACTCCAAA...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231509.7
ENST00000394464.7
CDS-3UTR TCA 90 bp CAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATCAGTGCTTGGAGTCTGATTaGGAAGCGACAGCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: QLLFPFNEKPPIVVDEHQCLESD*EATASE
Trigger: CTCACTGGCTGTCGCTTCTCAATCAGACTCCAAGCA...CTGATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACCTGCGCATTGCTTACTaGGCCTTTTGGAAAATCAAC +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHLRIAY*AFWKIN
Trigger: GTTGATTTTCCAAAAGGCTCAGTAAGCAATGCGCAG...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR TCA 90 bp TTTCCTTCATGGCATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATCTGCGCATTGCTTACTaGGCCTTTTGGAAAATCAAC +
Preference number: 4 (lower is better)
Translates to: FPSWHAQSSSHANYPALHLRIAY*AFWKIN
Trigger: GTTGATTTTCCAAAAGGCTCAGTAAGCAATGCGCAG...ATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATGCCATGAAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACCACTGGTCGACCTATTaGGGTTTGCAATGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHHWSTY*GLQCFL
Trigger: AAGAAAGCATTGCAAACCTCAATAGGTCGACCAGTG...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR TCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTCACTGGTCGACCTATTaGGGTTTGCAATGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSHWSTY*GLQCFL
Trigger: AAGAAAGCATTGCAAACCTCAATAGGTCGACCAGTG...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp CTAACATTTACTGCCAATTCGGTACAAATGTGTGGTTTGGTAATACCAGAACAGCACAGCAGTGGATGCTaGACTCTTGGGGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LTFTANSVQMCGLVIPEQHSSGC*TLGVLW
Trigger: CCAGAGAACCCCAAGAGTTCAGCATCCACTGCTGTG...CTGTTCTGGTATTACCAAACCACACATTTGTACCGAATTGGCAGTAAATGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACTCCATAATGACATCCTaGAGCTTCATCAGAGCACAC +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHSIMTS*SFIRAH
Trigger: GTGTGCTCTGATGAAGCTTCAGGATGTCATTATGGA...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR TCA 90 bp TTTCCTTCATGGCATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATTCCATAATGACATCCTaGAGCTTCATCAGAGCACAC +
Preference number: 4 (lower is better)
Translates to: FPSWHAQSSSHANYPALHSIMTS*SFIRAH
Trigger: GTGTGCTCTGATGAAGCTTCAGGATGTCATTATGGA...ATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATGCCATGAAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTTCCATAATGACATCCTaGAGCTTCATCAGAGCACAC +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSSIMTS*SFIRAH
Trigger: GTGTGCTCTGATGAAGCTTCAGGATGTCATTATGGA...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp ACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTTTCAGAGGTTTCTTGTaGGACTCCTGTAGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: TRLLENSLGNYETPPKGFFRGFL*DSCSGL
Trigger: CAGGCCACTACAGGAGTCTCACAAGAAACCTCTGAA...AAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp CAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATCAGAATAACCTCCAACAGTaGCACCAGGGTAGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: QLLFPFNEKPPIVVDEHQNNLQQ*HQGRGE
Trigger: CTCACCCCTACCCTGGTGTCACTGTTGGAGGTTATT...CTGATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTCCAGGTGTAAGTTCCTaGAACCTGGTATTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIPGVSS*NLVLPL
Trigger: CAAAGGCAATACCAGGTTTCAGGAACTTACACCTGG...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACAGTTTCCTTCCCTCTTaGCAATGGCTTTTCCTAGCT +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHSFLPS*QWLFLA
Trigger: AGCTAGGAAAAGCCATTGTCAAGAGGGAAGGAAACT...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR TCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTAGTTTCCTTCCCTCTTaGCAATGGCTTTTCCTAGCT +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSSFLPS*QWLFLA
Trigger: AGCTAGGAAAAGCCATTGTCAAGAGGGAAGGAAACT...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp TTTCCTTCATGGCATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATAGTTTCCTTCCCTCTTaGCAATGGCTTTTCCTAGCT +
Preference number: 4 (lower is better)
Translates to: FPSWHAQSSSHANYPALHSFLPS*QWLFLA
Trigger: AGCTAGGAAAAGCCATTGTCAAGAGGGAAGGAAACT...ATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATGCCATGAAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACCTACTCTCCCATCACTaGAAAGTGATGACGACTCAA +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHLLSHH*KVMTTQ
Trigger: TTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAG...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR TCA 90 bp AGAGAAGCAAATCCTTTCCTGAAAACCTGGTCACTAATCCTGGGTGGACCAGGTACAAAAATCAGTAGCTaGGCTTTCCTGTACCATCAG +
Preference number: 4 (lower is better)
Translates to: REANPFLKTWSLILGGPGTKISS*AFLYHQ
Trigger: CTGATGGTACAGGAAAGCTCAGCTACTGATTTTTGT...ACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGGATTTGCTTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR TCA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTACAAAAATCAGTAGCTaGGCTTTCCTGTACCATCAG +
Preference number: 4 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESTKISS*AFLYHQ
Trigger: CTGATGGTACAGGAAAGCTCAGCTACTGATTTTTGT...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTAAACTGTTTGGTTTCTaGGACCATCGCTGCCTGTAT +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSKLFGF*DHRCLY
Trigger: ATACAGGCAGCGATGGTCTCAGAAACCAAACAGTTT...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTAAACTAAACCTGCGCTaGCAGACTCACTGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSKLNLR*QTHCWN
Trigger: ATTCCAACAGTGAGTCTGTCAGCGCAGGTTTAGTTT...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCATTATGAGACTTAGGTaGAACTGGAATTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVAIMRLR*NWNCSL
Trigger: CAGGGAGCAATTCCAGTTTCACCTAAGTCTCATAAT...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR TCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCTTTGGAGTCCATCAGTaGATATCAACTGGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVAFGVHQ*ISTGLS
Trigger: AGAGAGACCAGTTGATATTCACTGATGGACTCCAAA...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394466.6
CDS-3UTR GCA 90 bp GGCATTTGGATATATATACCCCAAAAGTGTTATGTCCTAAGTGCCTCAGTTCTGGACAGATCTGGCTGCTaGGCATTGCTTACTGAGCCT +
Preference number: 4 (lower is better)
Translates to: GIWIYIPQKCYVLSASVLDRSGC*ALLTEP
Trigger: AGGCTCAGTAAGCAATGCGCAGCAGCCAGATCTGTC...CAGAACTGAGGCACTTAGGACATAACACTTTTGGGGTATATATATCCAAATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTTATACAATTTCACATTaGCACCGTTGGTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESYTISH*HRWCQS
Trigger: AGACTGGCACCAACGGTGGCAATGTGAAATTGTATA...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR GCA 90 bp CAAAAACACATTCACCTACAGCTACAGTCAGGGAGTGACCAGCCAAGATGGAAATTACATCTGGTCTCATaGTGGGGCTTGAATAGCCAT +
Preference number: 4 (lower is better)
Translates to: QKHIHLQLQSGSDQPRWKLHLVS*WGLNSH
Trigger: ATGGCTATTCAAGCCCCAGCATGAGACCAGATGTAA...TTTCCATCTTGGCTGGTCACTCCCTGACTGTAGCTGTAGGTGAATGTGTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACTTACATCTGGTCTCATaGTGGGGCTTGAATAGCCAT +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHLHLVS*WGLNSH
Trigger: ATGGCTATTCAAGCCCCAGCATGAGACCAGATGTAA...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR GCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACACCTGGTATTGCCTTTaGCCATTTCACTGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHTWYCL*PFHCCN
Trigger: ATTGCAGCAGTGAAATGGGCAAAGGCAATACCAGGT...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR GCA 90 bp CAAAAACACATTCACCTACAGCTACAGTCAGGGAGTGACCAGCCAAGATGGAAAACCTGGTATTGCCTTTaGCCATTTCACTGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: QKHIHLQLQSGSDQPRWKTWYCL*PFHCCN
Trigger: ATTGCAGCAGTGAAATGGGCAAAGGCAATACCAGGT...TTTCCATCTTGGCTGGTCACTCCCTGACTGTAGCTGTAGGTGAATGTGTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTACCTGGTATTGCCTTTaGCCATTTCACTGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSTWYCL*PFHCCN
Trigger: ATTGCAGCAGTGAAATGGGCAAAGGCAATACCAGGT...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR GCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACAACATCCAGGAGTACTaGAGTAGGGTCATTTGGTCA +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHNIQEY*SRVIWS
Trigger: TGACCAAATGACCCTACTGCAGTACTCCTGGATGTT...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR GCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTCCACCCCAGAGCAAATaGCATAAGAAACATCCAGGA +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIPPQSK*HKKHPG
Trigger: TCCTGGATGTTTCTTATGGCATTTGCTCTGGGGTGG...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR GCA 90 bp AGAGAAGCAAATCCTTTCCTGAAAACCTGGTCACTAATCCTGGGTGGACCAGGTCTCTACTCAAATGTCTaGATAGGCACAAGAATGAGG +
Preference number: 4 (lower is better)
Translates to: REANPFLKTWSLILGGPGLYSNV*IGTRMR
Trigger: CCTCATTCTTGTGCCTATGCAGACATTTGAGTAGAG...ACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGGATTTGCTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS-3UTR GCA 90 bp CCTGGGTGGACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCGTGTTATGTCCTAAGTaGCTCAGTTCTGCTTGTATA +
Preference number: 4 (lower is better)
Translates to: PGWTRLLENSLGNYETPPVLCPK*LSSACI
Trigger: TATACAAGCAGAACTGAGGCACTTAGGACATAACAC...GGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGTCCACCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp CAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATCAGCTTTCCTTCATGGCATaGCCAGAGCTCATCCCATGC +
Preference number: 4 (lower is better)
Translates to: QLLFPFNEKPPIVVDEHQLSFMA*PELIPC
Trigger: GCATGGGATGAGCTCTGGGCATGCCATGAAGGAAAG...CTGATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp CTAACATTTACTGCCAATTCGGTACAAATGTGTGGTTTGGTAATACCAGAACAGCCCTTTCTCCATGGGTaGGGGGAGAGCCCCTATTTA +
Preference number: 4 (lower is better)
Translates to: LTFTANSVQMCGLVIPEQPFLHG*GESPYL
Trigger: TAAATAGGGGCTCTCCCCCCACCCATGGAGAAAGGG...CTGTTCTGGTATTACCAAACCACACATTTGTACCGAATTGGCAGTAAATGTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394464.7
CDS-3UTR CCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTAAAGTCTTCGCTGCTTaGAGTCTGATTGAGAAGCGA +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSKVFAA*SLIEKR
Trigger: TCGCTTCTCAATCAGACTCCAAGCAGCGAAGACTTT...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp CAAACTATTGCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGAAAGTCTTCGCTGCTTaGAGTCTGATTGAGAAGCGA +
Preference number: 4 (lower is better)
Translates to: QTIAKLLKLLLSFNCWGRKVFAA*SLIEKR
Trigger: TCGCTTCTCAATCAGACTCCAAGCAGCGAAGACTTT...CCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACAAAGTCTTCGCTGCTTaGAGTCTGATTGAGAAGCGA +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHKVFAA*SLIEKR
Trigger: TCGCTTCTCAATCAGACTCCAAGCAGCGAAGACTTT...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR CCA 90 bp ATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTAAAGTGTCCTCCTTACAGAGTGAAACTGCTTTaGACAGATCTGGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: IVWEITKLHPKGLKCPPYRVKLL*TDLAAA
Trigger: CGCAGCAGCCAGATCTGTCCAAAGCAGTTTCACTCT...GTAAGGAGGACACTTTAAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTACTCTTGGGGTTCTCTaGAACACTGGTCGACCTATT +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRITLGVL*NTGRPI
Trigger: AATAGGTCGACCAGTGTTCCAGAGAACCCCAAGAGT...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp CATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATAGACACAAATCAACTCTTGGGGTTCTCTaGAACACTGGTCGACCTATT +
Preference number: 4 (lower is better)
Translates to: HAQSSSHANYPALHRHKSTLGVL*NTGRPI
Trigger: AATAGGTCGACCAGTGTTCCAGAGAACCCCAAGAGT...TGATTTGTGTCTATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp GCACAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATCAGCAGACACAGCAGTaGATGCTGAACTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: AQLLFPFNEKPPIVVDEHQQTQQ*MLNSWG
Trigger: ACCCCAAGAGTTCAGCATCCACTGCTGTGTCTGCTG...ATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp CCTGGGTGGACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCAGGTGCTTTGGTCTGTaGTATACAATTTCACATTGC +
Preference number: 4 (lower is better)
Translates to: PGWTRLLENSLGNYETPPRCFGL*YTISHC
Trigger: GCAATGTGAAATTGTATACCACAGACCAAAGCACCT...GGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGTCCACCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTATTCGTCTCTTTACCTaGGGACCCAGAAGAAAACTC +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSIRLFT*GPRRKL
Trigger: GAGTTTTCTTCTGGGTCCCCAGGTAAAGAGACGAAT...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp CAAACTATTGCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGATTCGTCTCTTTACCTaGGGACCCAGAAGAAAACTC +
Preference number: 4 (lower is better)
Translates to: QTIAKLLKLLLSFNCWGRIRLFT*GPRRKL
Trigger: GAGTTTTCTTCTGGGTCCCCAGGTAAAGAGACGAAT...CCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTTTGCTGTTGAGGAGCTaGATGGAGGAGAGCTTACAT +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRILLLRS*MEESLH
Trigger: ATGTAAGCTCTCCTCCATCCAGCTCCTCAACAGCAA...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp CAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATCAGACACCAGGCAGAGTTTaGGAGGTGGTCCTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: QLLFPFNEKPPIVVDEHQTPGRV*EVVLLL
Trigger: CAACAACAGGACCACCTCCCAAACTCTGCCTGGTGT...CTGATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp CCAGCAGGTCACTGGACTAGGTGCTCTATACCAGTTAGGACTGTTAATTTGCACAGCATGTGTTTACATTaGTCGTACATGCAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: PAGHWTRCSIPVRTVNLHSMCLH*SYMQGR
Trigger: TCTACCCTGCATGTACGACCAATGTAAACACATGCT...GTGCAAATTAACAGTCCTAACTGGTATAGAGCACCTAGTCCAGTGACCTGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAGCATGTGTTTACATTaGTCGTACATGCAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVASMCLH*SYMQGR
Trigger: TCTACCCTGCATGTACGACCAATGTAAACACATGCT...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp AGAGAAGCAAATCCTTTCCTGAAAACCTGGTCACTAATCCTGGGTGGACCAGGTTCATCAAATAGCTCTTaGCTCTTCAGACCGTCCTTA +
Preference number: 4 (lower is better)
Translates to: REANPFLKTWSLILGGPGSSNSS*LFRPSL
Trigger: TAAGGACGGTCTGAAGAGCCAAGAGCTATTTGATGA...ACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGGATTTGCTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCTCATCAAATAGCTCTTaGCTCTTCAGACCGTCCTTA +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVASSNSS*LFRPSL
Trigger: TAAGGACGGTCTGAAGAGCCAAGAGCTATTTGATGA...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp GGCATTTGGATATATATACCCCAAAAGTGTTATGTCCTAAGTGCCTCAGTTCTGCCCCAGTGCTTCCGTTaGACACATGCGCATTTTACG +
Preference number: 4 (lower is better)
Translates to: GIWIYIPQKCYVLSASVLPQCFR*THAHFT
Trigger: CGTAAAATGCGCATGTGTCCAACGGAAGCACTGGGG...CAGAACTGAGGCACTTAGGACATAACACTTTTGGGGTATATATATCCAAATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS-3UTR CCA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTCAGCTGTGTTACAGCTaGTTATCTGGAATCACAACT +
Preference number: 4 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESQLCYS*LSGITT
Trigger: AGTTGTGATTCCAGATAACCAGCTGTAACACAGCTG...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTCCAATTGGTGACAGATaGGAATGTGAAAATGGGTGT +
Preference number: 4 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESPIGDR*ECENGC
Trigger: ACACCCATTTTCACATTCCCATCTGTCACCAATTGG...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp ATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTAAAGTGTCCTCCTTACGAAGGGTGGTCAGAATaGGAGGCAGAGGATAACTTC +
Preference number: 4 (lower is better)
Translates to: IVWEITKLHPKGLKCPPYEGWSE*EAEDNF
Trigger: GAAGTTATCCTCTGCCTCCCATTCTGACCACCCTTC...GTAAGGAGGACACTTTAAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CCA 90 bp AGAGAAGCAAATCCTTTCCTGAAAACCTGGTCACTAATCCTGGGTGGACCAGGTCAGTTTGGGTTGGGATaGCCAGATAACACATACATA +
Preference number: 4 (lower is better)
Translates to: REANPFLKTWSLILGGPGQFGLG*PDNTYI
Trigger: TATGTATGTGTTATCTGGCCATCCCAACCCAAACTG...ACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGGATTTGCTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTCAGTTTGGGTTGGGATaGCCAGATAACACATACATA +
Preference number: 4 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESQFGLG*PDNTYI
Trigger: TATGTATGTGTTATCTGGCCATCCCAACCCAAACTG...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTACTCTCTCATGTAGATaGTTATGGCAGCTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSTLSCR*LWQLPD
Trigger: GTCAGGAAGCTGCCATAACCATCTACATGAGAGAGT...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504572.5
3UTR CAA 72 bp CCTGAAAACCTGGTCACTAATCCTGGGTGGACCAGGTaGCTTGAAAATAGTCTGGGAAATTACGAAACTCCA +
Preference number: 4 (lower is better)
Translates to: PENLVTNPGWTR*LENSLGNYETP
Trigger: TGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp CATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATAGACACAAATCATTTGGAGTCCATCAGTaGATATCAACTCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: HAQSSSHANYPALHRHKSFGVHQ*ISTLAE
Trigger: CTCTGCCAGAGTTGATATTCACTGATGGACTCCAAA...TGATTTGTGTCTATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp GGATTTGTTGTGAGTAACCAACTCTCACTGAAGTTACTACAAACTTCAACAGTTTCGCTGCTTGGAGTCTaGTTGAGAAGCGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: GFVVSNQLSLKLLQTSTVSLLGV*LRSDSQ
Trigger: CTGGCTGTCGCTTCTCAATCAGACTCCAAGCAGCGA...AACTGTTGAAGTTTGTAGTAACTTCAGTGAGAGTTGGTTACTCACAACAAATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTCTGCGCATTGCTTACTaGGCCTTTTGGAAAATCAAC +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRILRIAY*AFWKIN
Trigger: GTTGATTTTCCAAAAGGCTCAGTAAGCAATGCGCAG...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTCACTGGTCGACCTATTaGGGTTTGCAATGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIHWSTY*GLQCFL
Trigger: AAGAAAGCATTGCAAACCTCAATAGGTCGACCAGTG...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCGAAGATACATCAGAGTaGGTTTTTGGAAACTCCTTC +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVAEDTSE*VFGNSF
Trigger: GAAGGAGTTTCCAAAAACTCACTCTGATGTATCTTC...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTGAAGATACATCAGAGTaGGTTTTTGGAAACTCCTTC +
Preference number: 4 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESEDTSE*VFGNSF
Trigger: GAAGGAGTTTCCAAAAACTCACTCTGATGTATCTTC...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp CCAGCAGGTCACTGGACTAGGTGCTCTATACCAGTTAGGACTGTTAATTTGCACCAAATGTTGCTGTTCTaGAGATACATCAGAGTGAGT +
Preference number: 4 (lower is better)
Translates to: PAGHWTRCSIPVRTVNLHQMLLF*RYIRVS
Trigger: ACTCACTCTGATGTATCTTCAGAACAGCAACATTTG...GTGCAAATTAACAGTCCTAACTGGTATAGAGCACCTAGTCCAGTGACCTGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTTCCATAATGACATCCTaGAGCTTCATCAGAGCACAC +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRISIMTS*SFIRAH
Trigger: GTGTGCTCTGATGAAGCTTCAGGATGTCATTATGGA...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp ACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTCATGATCCTCCAAGTTaGGTCTGGAACAGAGCTATC +
Preference number: 4 (lower is better)
Translates to: TRLLENSLGNYETPPKGFHDPPS*VWNRAI
Trigger: GATAGCTCTGTTCCAGACTCAACTTGGAGGATCATG...AAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTCTACTCTCCCATCACTaGAAAGTGATGACGACTCAA +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRILLSHH*KVMTTQ
Trigger: TTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAG...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp TTTCCTTCATGGCATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATCCAACATGTGAGGTCTaGTGCTGGGAATTTTATCAT +
Preference number: 4 (lower is better)
Translates to: FPSWHAQSSSHANYPALHPTCEV*CWEFYH
Trigger: ATGATAAAATTCCCAGCATCAGACCTCACATGTTGG...ATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATGCCATGAAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS-3UTR TCA 90 bp AGAGAAGCAAATCCTTTCCTGAAAACCTGGTCACTAATCCTGGGTGGACCAGGTAATAGCTACCAACGATaGGCACAAACCAGAGAATTT +
Preference number: 4 (lower is better)
Translates to: REANPFLKTWSLILGGPGNSYQR*AQTREF
Trigger: AAATTCTCTGGTTTGTGCTCATCGTTGGTAGCTATT...ACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGGATTTGCTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS-3UTR TCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACAAGGAGCCAGGCAGATaGAAATTCCTGTTATTAAGG +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHKEPGR*KFLLLR
Trigger: CCTTAATAACAGGAATTTTCATCTGCCTGGCTCCTT...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000504572.5
CDS-3UTR TCA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTCTATTGCCAAACTTCTaGAGCTTCTGTTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESLLPNF*SFCCHS
Trigger: TGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAG...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp CCTGGGTGGACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCTCCTATAGTTGTCGATaGGCATCAGTTGACTTATTA +
Preference number: 4 (lower is better)
Translates to: PGWTRLLENSLGNYETPPSYSCR*ASVDLL
Trigger: TAATAAGTCAACTGATGCTCATCGACAACTATAGGA...GGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGTCCACCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp TTTCCTTCATGGCATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATATTATGAGACTTAGGTaGAACTGGAATTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: FPSWHAQSSSHANYPALHIMRLR*NWNCSL
Trigger: CAGGGAGCAATTCCAGTTTCACCTAAGTCTCATAAT...ATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATGCCATGAAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp GCACAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATCTGGCTGCTGCGCATTaGTTACTGAGCCTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: AQLLFPFNEKPPIVVDEHLAAAH*LLSLLE
Trigger: TTCCAAAAGGCTCAGTAAGCAATGCGCAGCAGCCAG...ATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp GCACAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATTTGGACAGATCTGGCTaGTGCGCATTGCTTACTGAG +
Preference number: 4 (lower is better)
Translates to: AQLLFPFNEKPPIVVDEHLDRSG*CALLTE
Trigger: CTCAGTAAGCAATGCGCAGCAGCCAGATCTGTCCAA...ATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp ACAGTGAAGAAATTCACAGGACTTGTGTTAAACTCTATGGCACACATTAGGGATCATTGCCACCGTTGGTaGCAGTCTGGCCCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: TVKKFTGLVLNSMAHIRDHCHRW*QSGPSN
Trigger: ATTTGAAGGGCCAGACTGGCACCAACGGTGGCAATG...ATCCCTAATGTGTGCCATAGAGTTTAACACAAGTCCTGTGAATTTCTTCACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR GCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACTATACAATTTCACATTaGCACCGTTGGTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHYTISH*HRWCQS
Trigger: AGACTGGCACCAACGGTGGCAATGTGAAATTGTATA...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR GCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTTATACAATTTCACATTaGCACCGTTGGTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSYTISH*HRWCQS
Trigger: AGACTGGCACCAACGGTGGCAATGTGAAATTGTATA...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR GCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTTTACATCTGGTCTCATaGTGGGGCTTGAATAGCCAT +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRILHLVS*WGLNSH
Trigger: ATGGCTATTCAAGCCCCAGCATGAGACCAGATGTAA...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR GCA 90 bp CAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATCAGACTGCTGCAATCACTTaGCGCCCTCCTAACATGTTG +
Preference number: 4 (lower is better)
Translates to: QLLFPFNEKPPIVVDEHQTAAIT*RPPNML
Trigger: CAACATGTTAGGAGGGCGGCAAGTGATTGCAGCAGT...CTGATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTACCTGGTATTGCCTTTaGCCATTTCACTGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRITWYCL*PFHCCN
Trigger: ATTGCAGCAGTGAAATGGGCAAAGGCAATACCAGGT...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR GCA 90 bp CATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATAGACACAAATCAAACATCCAGGAGTACTaGAGTAGGGTCATTTGGTCA +
Preference number: 4 (lower is better)
Translates to: HAQSSSHANYPALHRHKSNIQEY*SRVIWS
Trigger: TGACCAAATGACCCTACTGCAGTACTCCTGGATGTT...TGATTTGTGTCTATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTAACATCCAGGAGTACTaGAGTAGGGTCATTTGGTCA +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRINIQEY*SRVIWS
Trigger: TGACCAAATGACCCTACTGCAGTACTCCTGGATGTT...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR GCA 90 bp ATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTAAAGTGTCCTCCTTACCCACCCCAGAGCAAATaGCATAAGAAACATCCAGGA +
Preference number: 4 (lower is better)
Translates to: IVWEITKLHPKGLKCPPYPPQSK*HKKHPG
Trigger: TCCTGGATGTTTCTTATGGCATTTGCTCTGGGGTGG...GTAAGGAGGACACTTTAAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACTACATTGGTCGTACATaGAGGGTAGAGTCATTCTCT +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHYIGRT*RVESFS
Trigger: AGAGAATGACTCTACCCTGCATGTACGACCAATGTA...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR GCA 90 bp CAAACTATTGCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGTACATTGGTCGTACATaGAGGGTAGAGTCATTCTCT +
Preference number: 4 (lower is better)
Translates to: QTIAKLLKLLLSFNCWGRYIGRT*RVESFS
Trigger: AGAGAATGACTCTACCCTGCATGTACGACCAATGTA...CCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR GCA 90 bp AGAGAAGCAAATCCTTTCCTGAAAACCTGGTCACTAATCCTGGGTGGACCAGGTTTTAAAGAAGCGTGTTaGAATTTCCCCAGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: REANPFLKTWSLILGGPGFKEAC*NFPSRS
Trigger: ACTTCTGCTGGGGAAATTGCAACACGCTTCTTTAAA...ACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGGATTTGCTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS-3UTR GCA 90 bp ACTACTTCAAAAGGTCCTGAAAGACAAATAGTTTACCAGCTTTCTTGCCATATACCACTCATGCCCCAGTaGTTCCGTTGGACACATGCG +
Preference number: 4 (lower is better)
Translates to: TTSKGPERQIVYQLSCHIPLMPQ*FRWTHA
Trigger: CGCATGTGTCCAACGGAAGCACTGGGGCATGAGTGG...TATATGGCAAGAAAGCTGGTAAACTATTTGTCTTTCAGGACCTTTTGAAGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS-3UTR GCA 90 bp CAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATCAGCTTTCCTGGGCTAACTaGTCTGAGAGCACCAGAATG +
Preference number: 4 (lower is better)
Translates to: QLLFPFNEKPPIVVDEHQLSWAN*SESTRM
Trigger: CATTCTGGTGCTCTCAGAGCAGTTAGCCCAGGAAAG...CTGATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS-3UTR GCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTAGAAAGTTGGTAAGGTaGACACAGAAAGGGCTACTA +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSRKLVR*TQKGLL
Trigger: TAGTAGCCCTTTCTGTGTGCACCTTACCAACTTTCT...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR GCA 90 bp CCTGGGTGGACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCATGGCTAACATTTACTaGCAATTCGGTACAAATGTG +
Preference number: 4 (lower is better)
Translates to: PGWTRLLENSLGNYETPPMANIY*QFGTNV
Trigger: CACATTTGTACCGAATTGGCAGTAAATGTTAGCCAT...GGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGTCCACCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACGGATGCAATTATATTTaGTCCAGGAAAGCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHGCNYI*SRKACL
Trigger: CAGGCAAGCTTTCCTGGAGCAAATATAATTGCATCC...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424646.6
CDS-3UTR GCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACCCTTCCTTCCACACTTaGCCATCTACAGTTAATTCT +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHPSFHT*PSTVNS
Trigger: AGAATTAACTGTAGATGGGCAAGTGTGGAAGGAAGG...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504572.5
CDS-3UTR CCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTAAAGTCTTCGCTGCTTaGAGTCTGATTGAGAAGCGA +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIKVFAA*SLIEKR
Trigger: TCGCTTCTCAATCAGACTCCAAGCAGCGAAGACTTT...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp CATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATAGACACAAATCAAAAGTCTTCGCTGCTTaGAGTCTGATTGAGAAGCGA +
Preference number: 4 (lower is better)
Translates to: HAQSSSHANYPALHRHKSKVFAA*SLIEKR
Trigger: TCGCTTCTCAATCAGACTCCAAGCAGCGAAGACTTT...TGATTTGTGTCTATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp CAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATCAGAGAGTGAAACTGCTTTaGACAGATCTGGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: QLLFPFNEKPPIVVDEHQRVKLL*TDLAAA
Trigger: CGCAGCAGCCAGATCTGTCCAAAGCAGTTTCACTCT...CTGATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp ACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTACTCTTGGGGTTCTCTaGAACACTGGTCGACCTATT +
Preference number: 4 (lower is better)
Translates to: TRLLENSLGNYETPPKGFTLGVL*NTGRPI
Trigger: AATAGGTCGACCAGTGTTCCAGAGAACCCCAAGAGT...AAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp GGCATTTGGATATATATACCCCAAAAGTGTTATGTCCTAAGTGCCTCAGTTCTGTGGATGCTGAACTCTTaGGGTTCTCTGGAACACTGG +
Preference number: 4 (lower is better)
Translates to: GIWIYIPQKCYVLSASVLWMLNS*GSLEHW
Trigger: CCAGTGTTCCAGAGAACCCCAAGAGTTCAGCATCCA...CAGAACTGAGGCACTTAGGACATAACACTTTTGGGGTATATATATCCAAATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp GGATTTGTTGTGAGTAACCAACTCTCACTGAAGTTACTACAAACTTCAACAGTTGAAACTCCTTCTCTGTaGGGGCAGCAGACACAGCAG +
Preference number: 4 (lower is better)
Translates to: GFVVSNQLSLKLLQTSTVETPSL*GQQTQQ
Trigger: CTGCTGTGTCTGCTGCCCCCACAGAGAAGGAGTTTC...AACTGTTGAAGTTTGTAGTAACTTCAGTGAGAGTTGGTTACTCACAACAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp ACAGTGAAGAAATTCACAGGACTTGTGTTAAACTCTATGGCACACATTAGGGATCCGTTGGTGCCAGTCTaGCCCTTCAAATGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: TVKKFTGLVLNSMAHIRDPLVPV*PFKCCC
Trigger: ACAGCAACATTTGAAGGGCCAGACTGGCACCAACGG...ATCCCTAATGTGTGCCATAGAGTTTAACACAAGTCCTGTGAATTTCTTCACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp GGATTTGTTGTGAGTAACCAACTCTCACTGAAGTTACTACAAACTTCAACAGTTTCACATTGCCACCGTTaGTGCCAGTCTGGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: GFVVSNQLSLKLLQTSTVSHCHR*CQSGPS
Trigger: TGAAGGGCCAGACTGGCACCAACGGTGGCAATGTGA...AACTGTTGAAGTTTGTAGTAACTTCAGTGAGAGTTGGTTACTCACAACAAATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAGGTGCTTTGGTCTGTaGTATACAATTTCACATTGC +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVARCFGL*YTISHC
Trigger: GCAATGTGAAATTGTATACCACAGACCAAAGCACCT...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTATTCGTCTCTTTACCTaGGGACCCAGAAGAAAACTC +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIIRLFT*GPRRKL
Trigger: GAGTTTTCTTCTGGGTCCCCAGGTAAAGAGACGAAT...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTAGCATGTGTTTACATTaGTCGTACATGCAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSSMCLH*SYMQGR
Trigger: TCTACCCTGCATGTACGACCAATGTAAACACATGCT...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp CAAAAACACATTCACCTACAGCTACAGTCAGGGAGTGACCAGCCAAGATGGAAAAGCATGTGTTTACATTaGTCGTACATGCAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: QKHIHLQLQSGSDQPRWKSMCLH*SYMQGR
Trigger: TCTACCCTGCATGTACGACCAATGTAAACACATGCT...TTTCCATCTTGGCTGGTCACTCCCTGACTGTAGCTGTAGGTGAATGTGTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTTCATCAAATAGCTCTTaGCTCTTCAGACCGTCCTTA +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSSSNSS*LFRPSL
Trigger: TAAGGACGGTCTGAAGAGCCAAGAGCTATTTGATGA...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp CAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATCAGGACTTTGGGCACTGGTaGTTTAGGTGCCATCCTTCT +
Preference number: 4 (lower is better)
Translates to: QLLFPFNEKPPIVVDEHQDFGHW*FRCHPS
Trigger: AGAAGGATGGCACCTAAACCACCAGTGCCCAAAGTC...CTGATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACGAGGTACCTTTTGAATaGGGTGAAAGCAAACCCTTA +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHEVPFE*GESKPL
Trigger: TAAGGGTTTGCTTTCACCCCATTCAAAAGGTACCTC...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS-3UTR CCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACCCAATTGGTGACAGATaGGAATGTGAAAATGGGTGT +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHPIGDR*ECENGC
Trigger: ACACCCATTTTCACATTCCCATCTGTCACCAATTGG...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTCCAATTGGTGACAGATaGGAATGTGAAAATGGGTGT +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSPIGDR*ECENGC
Trigger: ACACCCATTTTCACATTCCCATCTGTCACCAATTGG...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp AAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTAACCCGGAGCGCCAAGATTGTTaGGATGAAAATCAGATTAAT +
Preference number: 4 (lower is better)
Translates to: KLLLSFNCWGRAVCESNPERQDC*DENQIN
Trigger: ATTAATCTGATTTTCATCCCAACAATCTTGGCGCTC...CGGGTTACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CCA 90 bp CAAAAACACATTCACCTACAGCTACAGTCAGGGAGTGACCAGCCAAGATGGAAACAGTTTGGGTTGGGATaGCCAGATAACACATACATA +
Preference number: 4 (lower is better)
Translates to: QKHIHLQLQSGSDQPRWKQFGLG*PDNTYI
Trigger: TATGTATGTGTTATCTGGCCATCCCAACCCAAACTG...TTTCCATCTTGGCTGGTCACTCCCTGACTGTAGCTGTAGGTGAATGTGTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
3UTR CAA 72 bp TCTATGCAAACTATTGCCAAACTTCTGAAGCTTCTGTaGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAA +
Preference number: 4 (lower is better)
Translates to: SMQTIAKLLKLL*SFNCWGRAVCE
Trigger: TTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTGCATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp TCTATACCAGTTAGGACTGTTAATTTGCACAACCTATATAATTCTCCACTGAAGCACAGCAGTGGATGCTaGACTCTTGGGGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SIPVRTVNLHNLYNSPLKHSSGC*TLGVLW
Trigger: CCAGAGAACCCCAAGAGTTCAGCATCCACTGCTGTG...CTTCAGTGGAGAATTATATAGGTTGTGCAAATTAACAGTCCTAACTGGTATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp CAAACTATTGCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGAAGATACATCAGAGTaGGTTTTTGGAAACTCCTTC +
Preference number: 4 (lower is better)
Translates to: QTIAKLLKLLLSFNCWGREDTSE*VFGNSF
Trigger: GAAGGAGTTTCCAAAAACTCACTCTGATGTATCTTC...CCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACGAAGATACATCAGAGTaGGTTTTTGGAAACTCCTTC +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHEDTSE*VFGNSF
Trigger: GAAGGAGTTTCCAAAAACTCACTCTGATGTATCTTC...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR TCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTCAAATGTTGCTGTTCTaGAGATACATCAGAGTGAGT +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSQMLLF*RYIRVS
Trigger: ACTCACTCTGATGTATCTTCAGAACAGCAACATTTG...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACCAAATGTTGCTGTTCTaGAGATACATCAGAGTGAGT +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHQMLLF*RYIRVS
Trigger: ACTCACTCTGATGTATCTTCAGAACAGCAACATTTG...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR TCA 90 bp CATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATAGACACAAATCACCTTCTAAGGTCCAGTaGTTTGGTATCAGAAGATCT +
Preference number: 4 (lower is better)
Translates to: HAQSSSHANYPALHRHKSPSKVQ*FGIRRS
Trigger: AGATCTTCTGATACCAAATCACTGGACCTTAGAAGG...TGATTTGTGTCTATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS-3UTR TCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTAAGGAGCCAGGCAGATaGAAATTCCTGTTATTAAGG +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIKEPGR*KFLLLR
Trigger: CCTTAATAACAGGAATTTTCATCTGCCTGGCTCCTT...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000504572.5
CDS-3UTR TCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTCCATCGCTGCCTGTATaGATGCATGTACAAACTATA +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIPSLPV*MHVQTI
Trigger: TATAGTTTGTACATGCATTCATACAGGCAGCGATGG...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp CTAACATTTACTGCCAATTCGGTACAAATGTGTGGTTTGGTAATACCAGAACAGGACTCACTGTTGGAATaGGAAGGGTGGTCAGAATGG +
Preference number: 4 (lower is better)
Translates to: LTFTANSVQMCGLVIPEQDSLLE*EGWSEW
Trigger: CCATTCTGACCACCCTTCTCATTCCAACAGTGAGTC...CTGTTCTGGTATTACCAAACCACACATTTGTACCGAATTGGCAGTAAATGTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR TCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCTCGATGAGCATCAGTTaGCTTATTATTGACAACGAA +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVASMSIS*LIIDNE
Trigger: TTCGTTGTCAATAATAAGTCAACTGATGCTCATCGA...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR TCA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTTCCTATAGTTGTCGATaGGCATCAGTTGACTTATTA +
Preference number: 4 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESSYSCR*ASVDLL
Trigger: TAATAAGTCAACTGATGCTCATCGACAACTATAGGA...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR TCA 90 bp CATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATAGACACAAATCAATTATGAGACTTAGGTaGAACTGGAATTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: HAQSSSHANYPALHRHKSIMRLR*NWNCSL
Trigger: CAGGGAGCAATTCCAGTTTCACCTAAGTCTCATAAT...TGATTTGTGTCTATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTTTTGGAGTCCATCAGTaGATATCAACTCTCTCATGT +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSFGVHQ*ISTLSC
Trigger: ACATGAGAGAGTTGATATTCACTGATGGACTCCAAA...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504572.5
CDS-3UTR GCA 90 bp ATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTAAAGTGTCCTCCTTACTTACATCTGGTCTCATaGTGGGGCTTGAATAGCCAT +
Preference number: 4 (lower is better)
Translates to: IVWEITKLHPKGLKCPPYLHLVS*WGLNSH
Trigger: ATGGCTATTCAAGCCCCAGCATGAGACCAGATGTAA...GTAAGGAGGACACTTTAAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp CTAACATTTACTGCCAATTCGGTACAAATGTGTGGTTTGGTAATACCAGAACAGACTGCTGCAATCACTTaGCGCCCTCCTAACATGTTG +
Preference number: 4 (lower is better)
Translates to: LTFTANSVQMCGLVIPEQTAAIT*RPPNML
Trigger: CAACATGTTAGGAGGGCGGCAAGTGATTGCAGCAGT...CTGTTCTGGTATTACCAAACCACACATTTGTACCGAATTGGCAGTAAATGTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp ACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTACCTGGTATTGCCTTTaGCCATTTCACTGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: TRLLENSLGNYETPPKGFTWYCL*PFHCCN
Trigger: ATTGCAGCAGTGAAATGGGCAAAGGCAATACCAGGT...AAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp GCACAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATCCACCCCAGAGCAAATaGCATAAGAAACATCCAGGA +
Preference number: 4 (lower is better)
Translates to: AQLLFPFNEKPPIVVDEHPPQSK*HKKHPG
Trigger: TCCTGGATGTTTCTTATGGCATTTGCTCTGGGGTGG...ATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTTACATTGGTCGTACATaGAGGGTAGAGTCATTCTCT +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIYIGRT*RVESFS
Trigger: AGAGAATGACTCTACCCTGCATGTACGACCAATGTA...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR GCA 90 bp CCAGCAGGTCACTGGACTAGGTGCTCTATACCAGTTAGGACTGTTAATTTGCACGTTTACCAGCTTTCTTaGCATATAGCCATTGCAAAA +
Preference number: 4 (lower is better)
Translates to: PAGHWTRCSIPVRTVNLHVYQLS*HIAIAK
Trigger: TTTTGCAATGGCTATATGGCAAGAAAGCTGGTAAAC...GTGCAAATTAACAGTCCTAACTGGTATAGAGCACCTAGTCCAGTGACCTGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR GCA 90 bp AGAGAAGCAAATCCTTTCCTGAAAACCTGGTCACTAATCCTGGGTGGACCAGGTCTCTATGCAAACTATTaGCAAACTTCTGAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: REANPFLKTWSLILGGPGLYANY*QTSEAS
Trigger: AGAAGCTTCAGAAGTTTGGCAATAGTTTGCATAGAG...ACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGGATTTGCTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR GCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAGTCTGACATTTCACTaGGTAGGTAAAAAGACACTT +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVASLTFH*VGKKTL
Trigger: AAGTGTCTTTTTACCTACGCAGTGAAATGTCAGACT...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR GCA 90 bp CCTGGGTGGACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCCTCCATATTTGGCATTaGTGTAAATGGCTAACATTT +
Preference number: 4 (lower is better)
Translates to: PGWTRLLENSLGNYETPPLHIWH*CKWLTF
Trigger: AAATGTTAGCCATTTACAGCAATGCCAAATATGGAG...GGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGTCCACCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp ACAGTGAAGAAATTCACAGGACTTGTGTTAAACTCTATGGCACACATTAGGGATTGGATGCTGAACTCTTaGGGTTCTCTGGAACACTGG +
Preference number: 4 (lower is better)
Translates to: TVKKFTGLVLNSMAHIRDWMLNS*GSLEHW
Trigger: CCAGTGTTCCAGAGAACCCCAAGAGTTCAGCATCCA...ATCCCTAATGTGTGCCATAGAGTTTAACACAAGTCCTGTGAATTTCTTCACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp GGATTTGTTGTGAGTAACCAACTCTCACTGAAGTTACTACAAACTTCAACAGTTCCGTTGGTGCCAGTCTaGCCCTTCAAATGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: GFVVSNQLSLKLLQTSTVPLVPV*PFKCCC
Trigger: ACAGCAACATTTGAAGGGCCAGACTGGCACCAACGG...AACTGTTGAAGTTTGTAGTAACTTCAGTGAGAGTTGGTTACTCACAACAAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTAGGTGCTTTGGTCTGTaGTATACAATTTCACATTGC +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSRCFGL*YTISHC
Trigger: GCAATGTGAAATTGTATACCACAGACCAAAGCACCT...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACAGGTGCTTTGGTCTGTaGTATACAATTTCACATTGC +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHRCFGL*YTISHC
Trigger: GCAATGTGAAATTGTATACCACAGACCAAAGCACCT...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR CCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCATGTCAAAGGTGCTTTaGTCTGTGGTATACAATTTC +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVAMSKVL*SVVYNF
Trigger: GAAATTGTATACCACAGACCAAAGCACCTTTGACAT...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp AGAGAAGCAAATCCTTTCCTGAAAACCTGGTCACTAATCCTGGGTGGACCAGGTATGTCAAAGGTGCTTTaGTCTGTGGTATACAATTTC +
Preference number: 4 (lower is better)
Translates to: REANPFLKTWSLILGGPGMSKVL*SVVYNF
Trigger: GAAATTGTATACCACAGACCAAAGCACCTTTGACAT...ACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGGATTTGCTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTATGTCAAAGGTGCTTTaGTCTGTGGTATACAATTTC +
Preference number: 4 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESMSKVL*SVVYNF
Trigger: GAAATTGTATACCACAGACCAAAGCACCTTTGACAT...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp GCACAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATTTGCTGTTGAGGAGCTaGATGGAGGAGAGCTTACAT +
Preference number: 4 (lower is better)
Translates to: AQLLFPFNEKPPIVVDEHLLLRS*MEESLH
Trigger: ATGTAAGCTCTCCTCCATCCAGCTCCTCAACAGCAA...ATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTAGCATGTGTTTACATTaGTCGTACATGCAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRISMCLH*SYMQGR
Trigger: TCTACCCTGCATGTACGACCAATGTAAACACATGCT...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTTCATCAAATAGCTCTTaGCTCTTCAGACCGTCCTTA +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRISSNSS*LFRPSL
Trigger: TAAGGACGGTCTGAAGAGCCAAGAGCTATTTGATGA...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp CATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATAGACACAAATCATCATCAAATAGCTCTTaGCTCTTCAGACCGTCCTTA +
Preference number: 4 (lower is better)
Translates to: HAQSSSHANYPALHRHKSSSNSS*LFRPSL
Trigger: TAAGGACGGTCTGAAGAGCCAAGAGCTATTTGATGA...TGATTTGTGTCTATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTCAGCTGTGTTACAGCTaGTTATCTGGAATCACAACT +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIQLCYS*LSGITT
Trigger: AGTTGTGATTCCAGATAACCAGCTGTAACACAGCTG...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp ACAGTGAAGAAATTCACAGGACTTGTGTTAAACTCTATGGCACACATTAGGGATGAAGGGTGGTCAGAATaGGAGGCAGAGGATAACTTC +
Preference number: 4 (lower is better)
Translates to: TVKKFTGLVLNSMAHIRDEGWSE*EAEDNF
Trigger: GAAGTTATCCTCTGCCTCCCATTCTGACCACCCTTC...ATCCCTAATGTGTGCCATAGAGTTTAACACAAGTCCTGTGAATTTCTTCACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCTGCTTGAAAATAGTCTaGGAAATTACGAAACTCCAC +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVACLKIV*EITKLH
Trigger: GTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCA...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CCA 90 bp AGAGAAGCAAATCCTTTCCTGAAAACCTGGTCACTAATCCTGGGTGGACCAGGTTGCTTGAAAATAGTCTaGGAAATTACGAAACTCCAC +
Preference number: 4 (lower is better)
Translates to: REANPFLKTWSLILGGPGCLKIV*EITKLH
Trigger: GTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCA...ACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGGATTTGCTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCTGGCATTGCTGTAAATaGCTAACATTTACTGCCAAT +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVAWHCCK*LTFTAN
Trigger: ATTGGCAGTAAATGTTAGCCATTTACAGCAATGCCA...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR TCA 90 bp GGCATTTGGATATATATACCCCAAAAGTGTTATGTCCTAAGTGCCTCAGTTCTGTTTGGAGTCCATCAGTaGATATCAACTCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GIWIYIPQKCYVLSASVLFGVHQ*ISTLAE
Trigger: CTCTGCCAGAGTTGATATTCACTGATGGACTCCAAA...CAGAACTGAGGCACTTAGGACATAACACTTTTGGGGTATATATATCCAAATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp CAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATCAGCTGCGCATTGCTTACTaGGCCTTTTGGAAAATCAAC +
Preference number: 4 (lower is better)
Translates to: QLLFPFNEKPPIVVDEHQLRIAY*AFWKIN
Trigger: GTTGATTTTCCAAAAGGCTCAGTAAGCAATGCGCAG...CTGATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp GGCATTTGGATATATATACCCCAAAAGTGTTATGTCCTAAGTGCCTCAGTTCTGCACTGGTCGACCTATTaGGGTTTGCAATGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: GIWIYIPQKCYVLSASVLHWSTY*GLQCFL
Trigger: AAGAAAGCATTGCAAACCTCAATAGGTCGACCAGTG...CAGAACTGAGGCACTTAGGACATAACACTTTTGGGGTATATATATCCAAATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTCAAATGTTGCTGTTCTaGAGATACATCAGAGTGAGT +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIQMLLF*RYIRVS
Trigger: ACTCACTCTGATGTATCTTCAGAACAGCAACATTTG...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR TCA 90 bp GCACAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATTCCATAATGACATCCTaGAGCTTCATCAGAGCACAC +
Preference number: 4 (lower is better)
Translates to: AQLLFPFNEKPPIVVDEHSIMTS*SFIRAH
Trigger: GTGTGCTCTGATGAAGCTTCAGGATGTCATTATGGA...ATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp ACAGTGAAGAAATTCACAGGACTTGTGTTAAACTCTATGGCACACATTAGGGATCCAGGTGTAAGTTCCTaGAACCTGGTATTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: TVKKFTGLVLNSMAHIRDPGVSS*NLVLPL
Trigger: CAAAGGCAATACCAGGTTTCAGGAACTTACACCTGG...ATCCCTAATGTGTGCCATAGAGTTTAACACAAGTCCTGTGAATTTCTTCACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp GGATTTGTTGTGAGTAACCAACTCTCACTGAAGTTACTACAAACTTCAACAGTTGGTGCCATCCTTCTTTaGCTGTGGAGATTACGTCCA +
Preference number: 4 (lower is better)
Translates to: GFVVSNQLSLKLLQTSTVGAILL*LWRLRP
Trigger: TGGACGTAATCTCCACAGTCAAAGAAGGATGGCACC...AACTGTTGAAGTTTGTAGTAACTTCAGTGAGAGTTGGTTACTCACAACAAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR TCA 90 bp CAAACTATTGCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGTAACCAACTCTCACTaGAGTTACTACAAACTTCAA +
Preference number: 4 (lower is better)
Translates to: QTIAKLLKLLLSFNCWGRVTNSH*SYYKLQ
Trigger: TTGAAGTTTGTAGTAACTTCAGTGAGAGTTGGTTAC...CCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR TCA 90 bp TTTCCTTCATGGCATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATAGGGAACTAAAATTATaGGACTTAGGTGAAACTGGA +
Preference number: 4 (lower is better)
Translates to: FPSWHAQSSSHANYPALHRELKL*DLGETG
Trigger: TCCAGTTTCACCTAAGTCTCATAATTTTAGTTCCCT...ATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATGCCATGAAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp GCACAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATAACATCCAGGAGTACTaGAGTAGGGTCATTTGGTCA +
Preference number: 4 (lower is better)
Translates to: AQLLFPFNEKPPIVVDEHNIQEY*SRVIWS
Trigger: TGACCAAATGACCCTACTGCAGTACTCCTGGATGTT...ATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp CAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATCAGAACATCCAGGAGTACTaGAGTAGGGTCATTTGGTCA +
Preference number: 4 (lower is better)
Translates to: QLLFPFNEKPPIVVDEHQNIQEY*SRVIWS
Trigger: TGACCAAATGACCCTACTGCAGTACTCCTGGATGTT...CTGATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp CAAAAACACATTCACCTACAGCTACAGTCAGGGAGTGACCAGCCAAGATGGAAATTTTCTCCTTCTCTCTaGCATTTAAAGAAGCGTGTT +
Preference number: 4 (lower is better)
Translates to: QKHIHLQLQSGSDQPRWKFSPSL*HLKKRV
Trigger: AACACGCTTCTTTAAATGGCAGAGAGAAGGAGAAAA...TTTCCATCTTGGCTGGTCACTCCCTGACTGTAGCTGTAGGTGAATGTGTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS-3UTR GCA 90 bp GGATTTGTTGTGAGTAACCAACTCTCACTGAAGTTACTACAAACTTCAACAGTTCTTCCGTTGGACACATaGGCATTTTACGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GFVVSNQLSLKLLQTSTVLPLDT*AFYGPA
Trigger: TGCAGGACCGTAAAATGCGCATGTGTCCAACGGAAG...AACTGTTGAAGTTTGTAGTAACTTCAGTGAGAGTTGGTTACTCACAACAAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS-3UTR GCA 90 bp ACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTAGAAAGTTGGTAAGGTaGACACAGAAAGGGCTACTA +
Preference number: 4 (lower is better)
Translates to: TRLLENSLGNYETPPKGFRKLVR*TQKGLL
Trigger: TAGTAGCCCTTTCTGTGTGCACCTTACCAACTTTCT...AAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR GCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACCTCTATGCAAACTATTaGCAAACTTCTGAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHLYANY*QTSEAS
Trigger: AGAAGCTTCAGAAGTTTGGCAATAGTTTGCATAGAG...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR GCA 90 bp CAAAAACACATTCACCTACAGCTACAGTCAGGGAGTGACCAGCCAAGATGGAAAAGTCTGACATTTCACTaGGTAGGTAAAAAGACACTT +
Preference number: 4 (lower is better)
Translates to: QKHIHLQLQSGSDQPRWKSLTFH*VGKKTL
Trigger: AAGTGTCTTTTTACCTACGCAGTGAAATGTCAGACT...TTTCCATCTTGGCTGGTCACTCCCTGACTGTAGCTGTAGGTGAATGTGTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACATGGCTAACATTTACTaGCAATTCGGTACAAATGTG +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHMANIY*QFGTNV
Trigger: CACATTTGTACCGAATTGGCAGTAAATGTTAGCCAT...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CCA 90 bp CCAGCAGGTCACTGGACTAGGTGCTCTATACCAGTTAGGACTGTTAATTTGCACGAGTTAATGATTCTTTaGAGTCCATCAGTGAATATC +
Preference number: 4 (lower is better)
Translates to: PAGHWTRCSIPVRTVNLHELMIL*SPSVNI
Trigger: GATATTCACTGATGGACTCCAAAGAATCATTAACTC...GTGCAAATTAACAGTCCTAACTGGTATAGAGCACCTAGTCCAGTGACCTGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCGAGTTAATGATTCTTTaGAGTCCATCAGTGAATATC +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVAELMIL*SPSVNI
Trigger: GATATTCACTGATGGACTCCAAAGAATCATTAACTC...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTAGGTGCTTTGGTCTGTaGTATACAATTTCACATTGC +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIRCFGL*YTISHC
Trigger: GCAATGTGAAATTGTATACCACAGACCAAAGCACCT...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACATGTCAAAGGTGCTTTaGTCTGTGGTATACAATTTC +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHMSKVL*SVVYNF
Trigger: GAAATTGTATACCACAGACCAAAGCACCTTTGACAT...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR CCA 90 bp ACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTAGCATGTGTTTACATTaGTCGTACATGCAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: TRLLENSLGNYETPPKGFSMCLH*SYMQGR
Trigger: TCTACCCTGCATGTACGACCAATGTAAACACATGCT...AAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp ATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTAAAGTGTCCTCCTTACAGCATGTGTTTACATTaGTCGTACATGCAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: IVWEITKLHPKGLKCPPYSMCLH*SYMQGR
Trigger: TCTACCCTGCATGTACGACCAATGTAAACACATGCT...GTAAGGAGGACACTTTAAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp AGAGAAGCAAATCCTTTCCTGAAAACCTGGTCACTAATCCTGGGTGGACCAGGTTGTTTAGAGTTTATTTaGGAAAGCTACGAACTAGCT +
Preference number: 4 (lower is better)
Translates to: REANPFLKTWSLILGGPGCLEFI*ESYELA
Trigger: AGCTAGTTCGTAGCTTTCCCAAATAAACTCTAAACA...ACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGGATTTGCTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CCA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCTGTTTAGAGTTTATTTaGGAAAGCTACGAACTAGCT +
Preference number: 4 (lower is better)
Translates to: PSTLPSLKSDDDSTASVACLEFI*ESYELA
Trigger: AGCTAGTTCGTAGCTTTCCCAAATAAACTCTAAACA...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp GGATTTGTTGTGAGTAACCAACTCTCACTGAAGTTACTACAAACTTCAACAGTTTACCCAGCAGGTCACTaGACTAGGTGCTCTATACCA +
Preference number: 4 (lower is better)
Translates to: GFVVSNQLSLKLLQTSTVYPAGH*TRCSIP
Trigger: TGGTATAGAGCACCTAGTCCAGTGACCTGCTGGGTA...AACTGTTGAAGTTTGTAGTAACTTCAGTGAGAGTTGGTTACTCACAACAAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CCA 90 bp ACAGTGAAGAAATTCACAGGACTTGTGTTAAACTCTATGGCACACATTAGGGATTTGTCATTCAACTGCTaGGGGAGGGCTGTATGTGAA +
Preference number: 4 (lower is better)
Translates to: TVKKFTGLVLNSMAHIRDLSFNC*GRAVCE
Trigger: TTCACATACAGCCCTCCCCCAGCAGTTGAATGACAA...ATCCCTAATGTGTGCCATAGAGTTTAACACAAGTCCTGTGAATTTCTTCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp ATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTAAAGTGTCCTCCTTACAGGCTACCATGGTTCTaGAAGTTTGACAGATCAATG +
Preference number: 4 (lower is better)
Translates to: IVWEITKLHPKGLKCPPYRLPWF*KFDRSM
Trigger: CATTGATCTGTCAAACTTCCAGAACCATGGTAGCCT...GTAAGGAGGACACTTTAAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp TTTCCTTCATGGCATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATTGCTTGAAAATAGTCTaGGAAATTACGAAACTCCAC +
Preference number: 4 (lower is better)
Translates to: FPSWHAQSSSHANYPALHCLKIV*EITKLH
Trigger: GTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCA...ATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATGCCATGAAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp GGCATTTGGATATATATACCCCAAAAGTGTTATGTCCTAAGTGCCTCAGTTCTGGTCACTAATCCTGGGTaGACCAGGTTGCTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: GIWIYIPQKCYVLSASVLVTNPG*TRLLEN
Trigger: ATTTTCAAGCAACCTGGTCCACCCAGGATTAGTGAC...CAGAACTGAGGCACTTAGGACATAACACTTTTGGGGTATATATATCCAAATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp GCACAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATGTCACTAATCCTGGGTaGACCAGGTTGCTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: AQLLFPFNEKPPIVVDEHVTNPG*TRLLEN
Trigger: ATTTTCAAGCAACCTGGTCCACCCAGGATTAGTGAC...ATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp CAAAAACACATTCACCTACAGCTACAGTCAGGGAGTGACCAGCCAAGATGGAAATTCGGTACAAATGTGTaGTTTGGTAATACCAGAACA +
Preference number: 4 (lower is better)
Translates to: QKHIHLQLQSGSDQPRWKFGTNV*FGNTRT
Trigger: TGTTCTGGTATTACCAAACCACACATTTGTACCGAA...TTTCCATCTTGGCTGGTCACTCCCTGACTGTAGCTGTAGGTGAATGTGTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp ACAGTGAAGAAATTCACAGGACTTGTGTTAAACTCTATGGCACACATTAGGGATCACTGGTCGACCTATTaGGGTTTGCAATGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: TVKKFTGLVLNSMAHIRDHWSTY*GLQCFL
Trigger: AAGAAAGCATTGCAAACCTCAATAGGTCGACCAGTG...ATCCCTAATGTGTGCCATAGAGTTTAACACAAGTCCTGTGAATTTCTTCACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp ACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTGAAGATACATCAGAGTaGGTTTTTGGAAACTCCTTC +
Preference number: 4 (lower is better)
Translates to: TRLLENSLGNYETPPKGFEDTSE*VFGNSF
Trigger: GAAGGAGTTTCCAAAAACTCACTCTGATGTATCTTC...AAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp TCTATACCAGTTAGGACTGTTAATTTGCACAACCTATATAATTCTCCACTGAAGTTCAGAGGTTTCTTGTaGGACTCCTGTAGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SIPVRTVNLHNLYNSPLKFRGFL*DSCSGL
Trigger: CAGGCCACTACAGGAGTCTCACAAGAAACCTCTGAA...CTTCAGTGGAGAATTATATAGGTTGTGCAAATTAACAGTCCTAACTGGTATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp ACAGTGAAGAAATTCACAGGACTTGTGTTAAACTCTATGGCACACATTAGGGATAGTTTCCTTCCCTCTTaGCAATGGCTTTTCCTAGCT +
Preference number: 4 (lower is better)
Translates to: TVKKFTGLVLNSMAHIRDSFLPS*QWLFLA
Trigger: AGCTAGGAAAAGCCATTGTCAAGAGGGAAGGAAACT...ATCCCTAATGTGTGCCATAGAGTTTAACACAAGTCCTGTGAATTTCTTCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp GCACAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATCCATCGCTGCCTGTATaGATGCATGTACAAACTATA +
Preference number: 4 (lower is better)
Translates to: AQLLFPFNEKPPIVVDEHPSLPV*MHVQTI
Trigger: TATAGTTTGTACATGCATTCATACAGGCAGCGATGG...ATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR TCA 90 bp ACTACTTCAAAAGGTCCTGAAAGACAAATAGTTTACCAGCTTTCTTGCCATATAGACTCACTGTTGGAATaGGAAGGGTGGTCAGAATGG +
Preference number: 4 (lower is better)
Translates to: TTSKGPERQIVYQLSCHIDSLLE*EGWSEW
Trigger: CCATTCTGACCACCCTTCTCATTCCAACAGTGAGTC...TATATGGCAAGAAAGCTGGTAAACTATTTGTCTTTCAGGACCTTTTGAAGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp CTAACATTTACTGCCAATTCGGTACAAATGTGTGGTTTGGTAATACCAGAACAGAAACTAAACCTGCGCTaGCAGACTCACTGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: LTFTANSVQMCGLVIPEQKLNLR*QTHCWN
Trigger: ATTCCAACAGTGAGTCTGTCAGCGCAGGTTTAGTTT...CTGTTCTGGTATTACCAAACCACACATTTGTACCGAATTGGCAGTAAATGTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR GCA 90 bp ACTACTTCAAAAGGTCCTGAAAGACAAATAGTTTACCAGCTTTCTTGCCATATACTGGCTGCTGCGCATTaGTTACTGAGCCTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: TTSKGPERQIVYQLSCHILAAAH*LLSLLE
Trigger: TTCCAAAAGGCTCAGTAAGCAATGCGCAGCAGCCAG...TATATGGCAAGAAAGCTGGTAAACTATTTGTCTTTCAGGACCTTTTGAAGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR GCA 90 bp GCACAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATTATACAATTTCACATTaGCACCGTTGGTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: AQLLFPFNEKPPIVVDEHYTISH*HRWCQS
Trigger: AGACTGGCACCAACGGTGGCAATGTGAAATTGTATA...ATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp ACAGTGAAGAAATTCACAGGACTTGTGTTAAACTCTATGGCACACATTAGGGATACCTGGTATTGCCTTTaGCCATTTCACTGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: TVKKFTGLVLNSMAHIRDTWYCL*PFHCCN
Trigger: ATTGCAGCAGTGAAATGGGCAAAGGCAATACCAGGT...ATCCCTAATGTGTGCCATAGAGTTTAACACAAGTCCTGTGAATTTCTTCACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR GCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACGGTAGAGTCATTCTCTaGTCATTAATAATCAGATCA +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHGRVIL*SLIIRS
Trigger: TGATCTGATTATTAATGAGCAGAGAATGACTCTACC...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR GCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTGGTAGAGTCATTCTCTaGTCATTAATAATCAGATCA +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSGRVIL*SLIIRS
Trigger: TGATCTGATTATTAATGAGCAGAGAATGACTCTACC...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR GCA 90 bp GGCATTTGGATATATATACCCCAAAAGTGTTATGTCCTAAGTGCCTCAGTTCTGTACATTGGTCGTACATaGAGGGTAGAGTCATTCTCT +
Preference number: 4 (lower is better)
Translates to: GIWIYIPQKCYVLSASVLYIGRT*RVESFS
Trigger: AGAGAATGACTCTACCCTGCATGTACGACCAATGTA...CAGAACTGAGGCACTTAGGACATAACACTTTTGGGGTATATATATCCAAATGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp ACTACTTCAAAAGGTCCTGAAAGACAAATAGTTTACCAGCTTTCTTGCCATATACTGTTGTCATTCAACTaGTGGGGGAGGGCTGTATGT +
Preference number: 4 (lower is better)
Translates to: TTSKGPERQIVYQLSCHILLSFN*WGRAVC
Trigger: ACATACAGCCCTCCCCCAGCAGTTGAATGACAACAG...TATATGGCAAGAAAGCTGGTAAACTATTTGTCTTTCAGGACCTTTTGAAGTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR GCA 90 bp ACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTGTGTTATGTCCTAAGTaGCTCAGTTCTGCTTGTATA +
Preference number: 4 (lower is better)
Translates to: TRLLENSLGNYETPPKGFVLCPK*LSSACI
Trigger: TATACAAGCAGAACTGAGGCACTTAGGACATAACAC...AAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp CAAACTATTGCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGAGTTAATGATTCTTTaGAGTCCATCAGTGAATATC +
Preference number: 4 (lower is better)
Translates to: QTIAKLLKLLLSFNCWGRELMIL*SPSVNI
Trigger: GATATTCACTGATGGACTCCAAAGAATCATTAACTC...CCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp ACAGTGAAGAAATTCACAGGACTTGTGTTAAACTCTATGGCACACATTAGGGATAAAGTCTTCGCTGCTTaGAGTCTGATTGAGAAGCGA +
Preference number: 4 (lower is better)
Translates to: TVKKFTGLVLNSMAHIRDKVFAA*SLIEKR
Trigger: TCGCTTCTCAATCAGACTCCAAGCAGCGAAGACTTT...ATCCCTAATGTGTGCCATAGAGTTTAACACAAGTCCTGTGAATTTCTTCACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp ACTACTTCAAAAGGTCCTGAAAGACAAATAGTTTACCAGCTTTCTTGCCATATAAGAGTGAAACTGCTTTaGACAGATCTGGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: TTSKGPERQIVYQLSCHIRVKLL*TDLAAA
Trigger: CGCAGCAGCCAGATCTGTCCAAAGCAGTTTCACTCT...TATATGGCAAGAAAGCTGGTAAACTATTTGTCTTTCAGGACCTTTTGAAGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp ATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTAAAGTGTCCTCCTTACAGGTGCTTTGGTCTGTaGTATACAATTTCACATTGC +
Preference number: 4 (lower is better)
Translates to: IVWEITKLHPKGLKCPPYRCFGL*YTISHC
Trigger: GCAATGTGAAATTGTATACCACAGACCAAAGCACCT...GTAAGGAGGACACTTTAAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTATGTCAAAGGTGCTTTaGTCTGTGGTATACAATTTC +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIMSKVL*SVVYNF
Trigger: GAAATTGTATACCACAGACCAAAGCACCTTTGACAT...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTTGTTTAGAGTTTATTTaGGAAAGCTACGAACTAGCT +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSCLEFI*ESYELA
Trigger: AGCTAGTTCGTAGCTTTCCCAAATAAACTCTAAACA...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp CAAAAACACATTCACCTACAGCTACAGTCAGGGAGTGACCAGCCAAGATGGAAATGTTTAGAGTTTATTTaGGAAAGCTACGAACTAGCT +
Preference number: 4 (lower is better)
Translates to: QKHIHLQLQSGSDQPRWKCLEFI*ESYELA
Trigger: AGCTAGTTCGTAGCTTTCCCAAATAAACTCTAAACA...TTTCCATCTTGGCTGGTCACTCCCTGACTGTAGCTGTAGGTGAATGTGTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CCA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTGTAGTTTTACAAACATaGATGTCTGACATACAGTTC +
Preference number: 4 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSVVLQT*MSDIQF
Trigger: GAACTGTATGTCAGACATCCATGTTTGTAAAACTAC...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp CAAACTATTGCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGTAGTTTTACAAACATaGATGTCTGACATACAGTTC +
Preference number: 4 (lower is better)
Translates to: QTIAKLLKLLLSFNCWGRVVLQT*MSDIQF
Trigger: GAACTGTATGTCAGACATCCATGTTTGTAAAACTAC...CCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACGAATTAGTGTATTATTaGCAACCTATGAGATTCTGC +
Preference number: 4 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHELVYY*QPMRFC
Trigger: GCAGAATCTCATAGGTTGCCAATAATACACTAATTC...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp CAAACTATTGCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGAATTAGTGTATTATTaGCAACCTATGAGATTCTGC +
Preference number: 4 (lower is better)
Translates to: QTIAKLLKLLLSFNCWGRELVYY*QPMRFC
Trigger: GCAGAATCTCATAGGTTGCCAATAATACACTAATTC...CCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp GGATTTGTTGTGAGTAACCAACTCTCACTGAAGTTACTACAAACTTCAACAGTTCCTTTCCTGAAAACCTaGTCACTAATCCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GFVVSNQLSLKLLQTSTVPFLKT*SLILGG
Trigger: TCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGG...AACTGTTGAAGTTTGTAGTAACTTCAGTGAGAGTTGGTTACTCACAACAAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp CATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATAGACACAAATCATTCGGTACAAATGTGTaGTTTGGTAATACCAGAACA +
Preference number: 4 (lower is better)
Translates to: HAQSSSHANYPALHRHKSFGTNV*FGNTRT
Trigger: TGTTCTGGTATTACCAAACCACACATTTGTACCGAA...TGATTTGTGTCTATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp GGATTTGTTGTGAGTAACCAACTCTCACTGAAGTTACTACAAACTTCAACAGTTCTGCGCATTGCTTACTaGGCCTTTTGGAAAATCAAC +
Preference number: 4 (lower is better)
Translates to: GFVVSNQLSLKLLQTSTVLRIAY*AFWKIN
Trigger: GTTGATTTTCCAAAAGGCTCAGTAAGCAATGCGCAG...AACTGTTGAAGTTTGTAGTAACTTCAGTGAGAGTTGGTTACTCACAACAAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp GCACAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATCAAATGTTGCTGTTCTaGAGATACATCAGAGTGAGT +
Preference number: 4 (lower is better)
Translates to: AQLLFPFNEKPPIVVDEHQMLLF*RYIRVS
Trigger: ACTCACTCTGATGTATCTTCAGAACAGCAACATTTG...ATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp ACTACTTCAAAAGGTCCTGAAAGACAAATAGTTTACCAGCTTTCTTGCCATATACATGATCCTCCAAGTTaGGTCTGGAACAGAGCTATC +
Preference number: 4 (lower is better)
Translates to: TTSKGPERQIVYQLSCHIHDPPS*VWNRAI
Trigger: GATAGCTCTGTTCCAGACTCAACTTGGAGGATCATG...TATATGGCAAGAAAGCTGGTAAACTATTTGTCTTTCAGGACCTTTTGAAGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp GGATTTGTTGTGAGTAACCAACTCTCACTGAAGTTACTACAAACTTCAACAGTTAGTTTCCTTCCCTCTTaGCAATGGCTTTTCCTAGCT +
Preference number: 4 (lower is better)
Translates to: GFVVSNQLSLKLLQTSTVSFLPS*QWLFLA
Trigger: AGCTAGGAAAAGCCATTGTCAAGAGGGAAGGAAACT...AACTGTTGAAGTTTGTAGTAACTTCAGTGAGAGTTGGTTACTCACAACAAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp GGCATTTGGATATATATACCCCAAAAGTGTTATGTCCTAAGTGCCTCAGTTCTGTTTGGAGTCCATCAGTaGATATCAACTTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: GIWIYIPQKCYVLSASVLFGVHQ*ISTSFS
Trigger: TGAGAAGGAAGTTGATATTCACTGATGGACTCCAAA...CAGAACTGAGGCACTTAGGACATAACACTTTTGGGGTATATATATCCAAATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS-3UTR TCA 90 bp ACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTAGGGAACTAAAATTATaGGACTTAGGTGAAACTGGA +
Preference number: 4 (lower is better)
Translates to: TRLLENSLGNYETPPKGFRELKL*DLGETG
Trigger: TCCAGTTTCACCTAAGTCTCATAATTTTAGTTCCCT...AAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp ACAGTGAAGAAATTCACAGGACTTGTGTTAAACTCTATGGCACACATTAGGGATTATACAATTTCACATTaGCACCGTTGGTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: TVKKFTGLVLNSMAHIRDYTISH*HRWCQS
Trigger: AGACTGGCACCAACGGTGGCAATGTGAAATTGTATA...ATCCCTAATGTGTGCCATAGAGTTTAACACAAGTCCTGTGAATTTCTTCACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR GCA 90 bp ACTACTTCAAAAGGTCCTGAAAGACAAATAGTTTACCAGCTTTCTTGCCATATACCACCCCAGAGCAAATaGCATAAGAAACATCCAGGA +
Preference number: 4 (lower is better)
Translates to: TTSKGPERQIVYQLSCHIPPQSK*HKKHPG
Trigger: TCCTGGATGTTTCTTATGGCATTTGCTCTGGGGTGG...TATATGGCAAGAAAGCTGGTAAACTATTTGTCTTTCAGGACCTTTTGAAGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR GCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTGGTAGAGTCATTCTCTaGTCATTAATAATCAGATCA +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIGRVIL*SLIIRS
Trigger: TGATCTGATTATTAATGAGCAGAGAATGACTCTACC...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR GCA 90 bp GGATTTGTTGTGAGTAACCAACTCTCACTGAAGTTACTACAAACTTCAACAGTTAGCAATTTTCCTCCCTaGCTTCACCACTTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: GFVVSNQLSLKLLQTSTVSNFPP*LHHFPF
Trigger: AAAGGGAAAGTGGTGAAGGCAGGGAGGAAAATTGCT...AACTGTTGAAGTTTGTAGTAACTTCAGTGAGAGTTGGTTACTCACAACAAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS-3UTR GCA 90 bp ATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTAAAGTGTCCTCCTTACGTTTACCAGCTTTCTTaGCATATAGCCATTGCAAAA +
Preference number: 4 (lower is better)
Translates to: IVWEITKLHPKGLKCPPYVYQLS*HIAIAK
Trigger: TTTTGCAATGGCTATATGGCAAGAAAGCTGGTAAAC...GTAAGGAGGACACTTTAAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR GCA 90 bp ATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTAAAGTGTCCTCCTTACCTCTATGCAAACTATTaGCAAACTTCTGAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: IVWEITKLHPKGLKCPPYLYANY*QTSEAS
Trigger: AGAAGCTTCAGAAGTTTGGCAATAGTTTGCATAGAG...GTAAGGAGGACACTTTAAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR GCA 90 bp CAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATCAGGTGTTATGTCCTAAGTaGCTCAGTTCTGCTTGTATA +
Preference number: 4 (lower is better)
Translates to: QLLFPFNEKPPIVVDEHQVLCPK*LSSACI
Trigger: TATACAAGCAGAACTGAGGCACTTAGGACATAACAC...CTGATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTGAGTTAATGATTCTTTaGAGTCCATCAGTGAATATC +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIELMIL*SPSVNI
Trigger: GATATTCACTGATGGACTCCAAAGAATCATTAACTC...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CCA 90 bp ACTACTTCAAAAGGTCCTGAAAGACAAATAGTTTACCAGCTTTCTTGCCATATAACTCTTGGGGTTCTCTaGAACACTGGTCGACCTATT +
Preference number: 4 (lower is better)
Translates to: TTSKGPERQIVYQLSCHITLGVL*NTGRPI
Trigger: AATAGGTCGACCAGTGTTCCAGAGAACCCCAAGAGT...TATATGGCAAGAAAGCTGGTAAACTATTTGTCTTTCAGGACCTTTTGAAGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp TCTATACCAGTTAGGACTGTTAATTTGCACAACCTATATAATTCTCCACTGAAGACTCTTGGGGTTCTCTaGAACACTGGTCGACCTATT +
Preference number: 4 (lower is better)
Translates to: SIPVRTVNLHNLYNSPLKTLGVL*NTGRPI
Trigger: AATAGGTCGACCAGTGTTCCAGAGAACCCCAAGAGT...CTTCAGTGGAGAATTATATAGGTTGTGCAAATTAACAGTCCTAACTGGTATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp GGCATTTGGATATATATACCCCAAAAGTGTTATGTCCTAAGTGCCTCAGTTCTGAGGTGCTTTGGTCTGTaGTATACAATTTCACATTGC +
Preference number: 4 (lower is better)
Translates to: GIWIYIPQKCYVLSASVLRCFGL*YTISHC
Trigger: GCAATGTGAAATTGTATACCACAGACCAAAGCACCT...CAGAACTGAGGCACTTAGGACATAACACTTTTGGGGTATATATATCCAAATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp ACAGTGAAGAAATTCACAGGACTTGTGTTAAACTCTATGGCACACATTAGGGATTCATCAAATAGCTCTTaGCTCTTCAGACCGTCCTTA +
Preference number: 4 (lower is better)
Translates to: TVKKFTGLVLNSMAHIRDSSNSS*LFRPSL
Trigger: TAAGGACGGTCTGAAGAGCCAAGAGCTATTTGATGA...ATCCCTAATGTGTGCCATAGAGTTTAACACAAGTCCTGTGAATTTCTTCACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTGAATTAGTGTATTATTaGCAACCTATGAGATTCTGC +
Preference number: 4 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIELVYY*QPMRFC
Trigger: GCAGAATCTCATAGGTTGCCAATAATACACTAATTC...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp ATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTAAAGTGTCCTCCTTACGAGCGCCAAGATTGTTaGGATGAAAATCAGATTAAT +
Preference number: 4 (lower is better)
Translates to: IVWEITKLHPKGLKCPPYERQDC*DENQIN
Trigger: ATTAATCTGATTTTCATCCCAACAATCTTGGCGCTC...GTAAGGAGGACACTTTAAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp CATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATAGACACAAATCAATGTTTCTCCATATTTaGCATTGCTGTAAATGGCTA +
Preference number: 4 (lower is better)
Translates to: HAQSSSHANYPALHRHKSMFLHI*HCCKWL
Trigger: TAGCCATTTACAGCAATGCCAAATATGGAGAAACAT...TGATTTGTGTCTATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp ACAGTGAAGAAATTCACAGGACTTGTGTTAAACTCTATGGCACACATTAGGGATCAAATGTTGCTGTTCTaGAGATACATCAGAGTGAGT +
Preference number: 4 (lower is better)
Translates to: TVKKFTGLVLNSMAHIRDQMLLF*RYIRVS
Trigger: ACTCACTCTGATGTATCTTCAGAACAGCAACATTTG...ATCCCTAATGTGTGCCATAGAGTTTAACACAAGTCCTGTGAATTTCTTCACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp ACTACTTCAAAAGGTCCTGAAAGACAAATAGTTTACCAGCTTTCTTGCCATATATCCATAATGACATCCTaGAGCTTCATCAGAGCACAC +
Preference number: 4 (lower is better)
Translates to: TTSKGPERQIVYQLSCHISIMTS*SFIRAH
Trigger: GTGTGCTCTGATGAAGCTTCAGGATGTCATTATGGA...TATATGGCAAGAAAGCTGGTAAACTATTTGTCTTTCAGGACCTTTTGAAGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp TCTATACCAGTTAGGACTGTTAATTTGCACAACCTATATAATTCTCCACTGAAGATGGAAACCAACATGTaGGGTCTGATGCTGGGAATT +
Preference number: 4 (lower is better)
Translates to: SIPVRTVNLHNLYNSPLKMETNM*GLMLGI
Trigger: AATTCCCAGCATCAGACCTCACATGTTGGTTTCCAT...CTTCAGTGGAGAATTATATAGGTTGTGCAAATTAACAGTCCTAACTGGTATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS-3UTR TCA 90 bp GGATTTGTTGTGAGTAACCAACTCTCACTGAAGTTACTACAAACTTCAACAGTTACAAAAATCAGTAGCTaGGCTTTCCTGTACCATCAG +
Preference number: 4 (lower is better)
Translates to: GFVVSNQLSLKLLQTSTVTKISS*AFLYHQ
Trigger: CTGATGGTACAGGAAAGCTCAGCTACTGATTTTTGT...AACTGTTGAAGTTTGTAGTAACTTCAGTGAGAGTTGGTTACTCACAACAAATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR TCA 90 bp GCACAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATACAAACATGGATGTCTaGCATACAGTTCTAAATCAC +
Preference number: 4 (lower is better)
Translates to: AQLLFPFNEKPPIVVDEHTNMDV*HTVLNH
Trigger: GTGATTTAGAACTGTATGTCAGACATCCATGTTTGT...ATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR TCA 90 bp TCTATACCAGTTAGGACTGTTAATTTGCACAACCTATATAATTCTCCACTGAAGAAACTGTTTGGTTTCTaGGACCATCGCTGCCTGTAT +
Preference number: 4 (lower is better)
Translates to: SIPVRTVNLHNLYNSPLKKLFGF*DHRCLY
Trigger: ATACAGGCAGCGATGGTCTCAGAAACCAAACAGTTT...CTTCAGTGGAGAATTATATAGGTTGTGCAAATTAACAGTCCTAACTGGTATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp TCTATACCAGTTAGGACTGTTAATTTGCACAACCTATATAATTCTCCACTGAAGAAACTAAACCTGCGCTaGCAGACTCACTGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: SIPVRTVNLHNLYNSPLKKLNLR*QTHCWN
Trigger: ATTCCAACAGTGAGTCTGTCAGCGCAGGTTTAGTTT...CTTCAGTGGAGAATTATATAGGTTGTGCAAATTAACAGTCCTAACTGGTATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp CTAACATTTACTGCCAATTCGGTACAAATGTGTGGTTTGGTAATACCAGAACAGCTATTGCCAAACTTCTaGAGCTTCTGTTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: LTFTANSVQMCGLVIPEQLLPNF*SFCCHS
Trigger: TGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAG...CTGTTCTGGTATTACCAAACCACACATTTGTACCGAATTGGCAGTAAATGTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR TCA 90 bp GGCATTTGGATATATATACCCCAAAAGTGTTATGTCCTAAGTGCCTCAGTTCTGGTAACCAACTCTCACTaGAGTTACTACAAACTTCAA +
Preference number: 4 (lower is better)
Translates to: GIWIYIPQKCYVLSASVLVTNSH*SYYKLQ
Trigger: TTGAAGTTTGTAGTAACTTCAGTGAGAGTTGGTTAC...CAGAACTGAGGCACTTAGGACATAACACTTTTGGGGTATATATATCCAAATGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp GCACAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATGTAACCAACTCTCACTaGAGTTACTACAAACTTCAA +
Preference number: 4 (lower is better)
Translates to: AQLLFPFNEKPPIVVDEHVTNSH*SYYKLQ
Trigger: TTGAAGTTTGTAGTAACTTCAGTGAGAGTTGGTTAC...ATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp CAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATCAGAGGGAACTAAAATTATaGGACTTAGGTGAAACTGGA +
Preference number: 4 (lower is better)
Translates to: QLLFPFNEKPPIVVDEHQRELKL*DLGETG
Trigger: TCCAGTTTCACCTAAGTCTCATAATTTTAGTTCCCT...CTGATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp ACTACTTCAAAAGGTCCTGAAAGACAAATAGTTTACCAGCTTTCTTGCCATATAAACATCCAGGAGTACTaGAGTAGGGTCATTTGGTCA +
Preference number: 4 (lower is better)
Translates to: TTSKGPERQIVYQLSCHINIQEY*SRVIWS
Trigger: TGACCAAATGACCCTACTGCAGTACTCCTGGATGTT...TATATGGCAAGAAAGCTGGTAAACTATTTGTCTTTCAGGACCTTTTGAAGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR GCA 90 bp ACAGTGAAGAAATTCACAGGACTTGTGTTAAACTCTATGGCACACATTAGGGATTTGCCATATAGCCATTaGAAAAATAGGGCGTTAGGT +
Preference number: 4 (lower is better)
Translates to: TVKKFTGLVLNSMAHIRDLPYSH*KNRALG
Trigger: ACCTAACGCCCTATTTTTGCAATGGCTATATGGCAA...ATCCCTAATGTGTGCCATAGAGTTTAACACAAGTCCTGTGAATTTCTTCACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp ATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTAAAGTGTCCTCCTTACGTAGTTTTACAAACATaGATGTCTGACATACAGTTC +
Preference number: 4 (lower is better)
Translates to: IVWEITKLHPKGLKCPPYVVLQT*MSDIQF
Trigger: GAACTGTATGTCAGACATCCATGTTTGTAAAACTAC...GTAAGGAGGACACTTTAAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CCA 90 bp GGATTTGTTGTGAGTAACCAACTCTCACTGAAGTTACTACAAACTTCAACAGTTAGGCTACCATGGTTCTaGAAGTTTGACAGATCAATG +
Preference number: 4 (lower is better)
Translates to: GFVVSNQLSLKLLQTSTVRLPWF*KFDRSM
Trigger: CATTGATCTGTCAAACTTCCAGAACCATGGTAGCCT...AACTGTTGAAGTTTGTAGTAACTTCAGTGAGAGTTGGTTACTCACAACAAATCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp CAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATCAGTGGCATTGCTGTAAATaGCTAACATTTACTGCCAAT +
Preference number: 4 (lower is better)
Translates to: QLLFPFNEKPPIVVDEHQWHCCK*LTFTAN
Trigger: ATTGGCAGTAAATGTTAGCCATTTACAGCAATGCCA...CTGATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp GCACAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATTGGCATTGCTGTAAATaGCTAACATTTACTGCCAAT +
Preference number: 4 (lower is better)
Translates to: AQLLFPFNEKPPIVVDEHWHCCK*LTFTAN
Trigger: ATTGGCAGTAAATGTTAGCCATTTACAGCAATGCCA...ATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
3UTR CAA 72 bp TGGACTAGGTGCTCTATACCAGTTAGGACTGTTAATTaGCACAACCTATATAATTCTCCACTGAAGCAGATA +
Preference number: 4 (lower is better)
Translates to: WTRCSIPVRTVN*HNLYNSPLKQI
Trigger: TATCTGCTTCAGTGGAGAATTATATAGGTTGTGCAAATTAACAGTCCTAACTGGTATAGAGCACCTAGTCCA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp ACTACTTCAAAAGGTCCTGAAAGACAAATAGTTTACCAGCTTTCTTGCCATATACCATCGCTGCCTGTATaGATGCATGTACAAACTATA +
Preference number: 4 (lower is better)
Translates to: TTSKGPERQIVYQLSCHIPSLPV*MHVQTI
Trigger: TATAGTTTGTACATGCATTCATACAGGCAGCGATGG...TATATGGCAAGAAAGCTGGTAAACTATTTGTCTTTCAGGACCTTTTGAAGTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR GCA 90 bp ACTACTTCAAAAGGTCCTGAAAGACAAATAGTTTACCAGCTTTCTTGCCATATATATACAATTTCACATTaGCACCGTTGGTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: TTSKGPERQIVYQLSCHIYTISH*HRWCQS
Trigger: AGACTGGCACCAACGGTGGCAATGTGAAATTGTATA...TATATGGCAAGAAAGCTGGTAAACTATTTGTCTTTCAGGACCTTTTGAAGTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR GCA 90 bp ACAGTGAAGAAATTCACAGGACTTGTGTTAAACTCTATGGCACACATTAGGGATGTTTACCAGCTTTCTTaGCATATAGCCATTGCAAAA +
Preference number: 4 (lower is better)
Translates to: TVKKFTGLVLNSMAHIRDVYQLS*HIAIAK
Trigger: TTTTGCAATGGCTATATGGCAAGAAAGCTGGTAAAC...ATCCCTAATGTGTGCCATAGAGTTTAACACAAGTCCTGTGAATTTCTTCACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR GCA 90 bp GCACAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATCTCCATATTTGGCATTaGTGTAAATGGCTAACATTT +
Preference number: 4 (lower is better)
Translates to: AQLLFPFNEKPPIVVDEHLHIWH*CKWLTF
Trigger: AAATGTTAGCCATTTACAGCAATGCCAAATATGGAG...ATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp GCACAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATGAGTTAATGATTCTTTaGAGTCCATCAGTGAATATC +
Preference number: 4 (lower is better)
Translates to: AQLLFPFNEKPPIVVDEHELMIL*SPSVNI
Trigger: GATATTCACTGATGGACTCCAAAGAATCATTAACTC...ATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp ACAGTGAAGAAATTCACAGGACTTGTGTTAAACTCTATGGCACACATTAGGGATATGTCAAAGGTGCTTTaGTCTGTGGTATACAATTTC +
Preference number: 4 (lower is better)
Translates to: TVKKFTGLVLNSMAHIRDMSKVL*SVVYNF
Trigger: GAAATTGTATACCACAGACCAAAGCACCTTTGACAT...ATCCCTAATGTGTGCCATAGAGTTTAACACAAGTCCTGTGAATTTCTTCACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp TCTATACCAGTTAGGACTGTTAATTTGCACAACCTATATAATTCTCCACTGAAGCAGCTGTGTTACAGCTaGTTATCTGGAATCACAACT +
Preference number: 4 (lower is better)
Translates to: SIPVRTVNLHNLYNSPLKQLCYS*LSGITT
Trigger: AGTTGTGATTCCAGATAACCAGCTGTAACACAGCTG...CTTCAGTGGAGAATTATATAGGTTGTGCAAATTAACAGTCCTAACTGGTATAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp CTAACATTTACTGCCAATTCGGTACAAATGTGTGGTTTGGTAATACCAGAACAGGAGCGCCAAGATTGTTaGGATGAAAATCAGATTAAT +
Preference number: 4 (lower is better)
Translates to: LTFTANSVQMCGLVIPEQERQDC*DENQIN
Trigger: ATTAATCTGATTTTCATCCCAACAATCTTGGCGCTC...CTGTTCTGGTATTACCAAACCACACATTTGTACCGAATTGGCAGTAAATGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp CTAACATTTACTGCCAATTCGGTACAAATGTGTGGTTTGGTAATACCAGAACAGTTCGGTACAAATGTGTaGTTTGGTAATACCAGAACA +
Preference number: 4 (lower is better)
Translates to: LTFTANSVQMCGLVIPEQFGTNV*FGNTRT
Trigger: TGTTCTGGTATTACCAAACCACACATTTGTACCGAA...CTGTTCTGGTATTACCAAACCACACATTTGTACCGAATTGGCAGTAAATGTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR TCA 90 bp TCTATACCAGTTAGGACTGTTAATTTGCACAACCTATATAATTCTCCACTGAAGCAAATGTTGCTGTTCTaGAGATACATCAGAGTGAGT +
Preference number: 4 (lower is better)
Translates to: SIPVRTVNLHNLYNSPLKQMLLF*RYIRVS
Trigger: ACTCACTCTGATGTATCTTCAGAACAGCAACATTTG...CTTCAGTGGAGAATTATATAGGTTGTGCAAATTAACAGTCCTAACTGGTATAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR TCA 90 bp GGATTTGTTGTGAGTAACCAACTCTCACTGAAGTTACTACAAACTTCAACAGTTTCCTATAGTTGTCGATaGGCATCAGTTGACTTATTA +
Preference number: 4 (lower is better)
Translates to: GFVVSNQLSLKLLQTSTVSYSCR*ASVDLL
Trigger: TAATAAGTCAACTGATGCTCATCGACAACTATAGGA...AACTGTTGAAGTTTGTAGTAACTTCAGTGAGAGTTGGTTACTCACAACAAATCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp CTAACATTTACTGCCAATTCGGTACAAATGTGTGGTTTGGTAATACCAGAACAGGGTAGAGTCATTCTCTaGTCATTAATAATCAGATCA +
Preference number: 4 (lower is better)
Translates to: LTFTANSVQMCGLVIPEQGRVIL*SLIIRS
Trigger: TGATCTGATTATTAATGAGCAGAGAATGACTCTACC...CTGTTCTGGTATTACCAAACCACACATTTGTACCGAATTGGCAGTAAATGTTAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR GCA 90 bp ACTACTTCAAAAGGTCCTGAAAGACAAATAGTTTACCAGCTTTCTTGCCATATATTGCCATATAGCCATTaGAAAAATAGGGCGTTAGGT +
Preference number: 4 (lower is better)
Translates to: TTSKGPERQIVYQLSCHILPYSH*KNRALG
Trigger: ACCTAACGCCCTATTTTTGCAATGGCTATATGGCAA...TATATGGCAAGAAAGCTGGTAAACTATTTGTCTTTCAGGACCTTTTGAAGTAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR GCA 90 bp GGATTTGTTGTGAGTAACCAACTCTCACTGAAGTTACTACAAACTTCAACAGTTATGGCTAACATTTACTaGCAATTCGGTACAAATGTG +
Preference number: 4 (lower is better)
Translates to: GFVVSNQLSLKLLQTSTVMANIY*QFGTNV
Trigger: CACATTTGTACCGAATTGGCAGTAAATGTTAGCCAT...AACTGTTGAAGTTTGTAGTAACTTCAGTGAGAGTTGGTTACTCACAACAAATCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp TCTATACCAGTTAGGACTGTTAATTTGCACAACCTATATAATTCTCCACTGAAGAGGTGCTTTGGTCTGTaGTATACAATTTCACATTGC +
Preference number: 4 (lower is better)
Translates to: SIPVRTVNLHNLYNSPLKRCFGL*YTISHC
Trigger: GCAATGTGAAATTGTATACCACAGACCAAAGCACCT...CTTCAGTGGAGAATTATATAGGTTGTGCAAATTAACAGTCCTAACTGGTATAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR GCA 90 bp GGATTTGTTGTGAGTAACCAACTCTCACTGAAGTTACTACAAACTTCAACAGTTGGTAGAGTCATTCTCTaGTCATTAATAATCAGATCA +
Preference number: 4 (lower is better)
Translates to: GFVVSNQLSLKLLQTSTVGRVIL*SLIIRS
Trigger: TGATCTGATTATTAATGAGCAGAGAATGACTCTACC...AACTGTTGAAGTTTGTAGTAACTTCAGTGAGAGTTGGTTACTCACAACAAATCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CCA 90 bp TCTATACCAGTTAGGACTGTTAATTTGCACAACCTATATAATTCTCCACTGAAGTGTTTAGAGTTTATTTaGGAAAGCTACGAACTAGCT +
Preference number: 4 (lower is better)
Translates to: SIPVRTVNLHNLYNSPLKCLEFI*ESYELA
Trigger: AGCTAGTTCGTAGCTTTCCCAAATAAACTCTAAACA...CTTCAGTGGAGAATTATATAGGTTGTGCAAATTAACAGTCCTAACTGGTATAGA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CCA 90 bp TCTATACCAGTTAGGACTGTTAATTTGCACAACCTATATAATTCTCCACTGAAGATGTTTCTCCATATTTaGCATTGCTGTAAATGGCTA +
Preference number: 4 (lower is better)
Translates to: SIPVRTVNLHNLYNSPLKMFLHI*HCCKWL
Trigger: TAGCCATTTACAGCAATGCCAAATATGGAGAAACAT...CTTCAGTGGAGAATTATATAGGTTGTGCAAATTAACAGTCCTAACTGGTATAGA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CCA 90 bp ACTACTTCAAAAGGTCCTGAAAGACAAATAGTTTACCAGCTTTCTTGCCATATAATGTTTCTCCATATTTaGCATTGCTGTAAATGGCTA +
Preference number: 4 (lower is better)
Translates to: TTSKGPERQIVYQLSCHIMFLHI*HCCKWL
Trigger: TAGCCATTTACAGCAATGCCAAATATGGAGAAACAT...TATATGGCAAGAAAGCTGGTAAACTATTTGTCTTTCAGGACCTTTTGAAGTAGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS GCA 90 bp GCGCGCGTGCCCCGTCCCGGTCCCAGCTGCTTCGGCCGCTCCGGCTaGGGCGTCTCCTTCCACCCACAGAATCCGTCCCCGACGGGCAGG +
Preference number: 5 (lower is better)
Translates to: ARVPRPGPSCFGRSG*GVSFHPQNPSPTGR
Trigger: CCTGCCCGTCGGGGACGGATTCTGTGGGTGGAAGGAGACGCCGCAGCCGGAGCGGCCGAAGCAGCTGGGACCGGGACGGGGCACGCGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231509.7
ENST00000394464.7
CDS TCA 90 bp GGCGTCTCCTTCCACCCACAGAATCCGTCCCCGACGGGCAGGCGGTaGCTCGGGCTCCCGTCACAGACACGAGCTCGCAAAATGGAGGAG +
Preference number: 5 (lower is better)
Translates to: GVSFHPQNPSPTGRR*LGLPSQTRARKMEE
Trigger: CTCCTCCATTTTGCGAGCTCGTGTCTGTGACGGGAGCCCGAGTCACCGCCTGCCCGTCGGGGACGGATTCTGTGGGTGGAAGGAGACGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231509.7
ENST00000394464.7
CDS-3UTR CAA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACAGCTCGCTCTGCCCCTaGGCGGCAAGCGCCGCCAGT +
Preference number: 5 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHSSLCP*AASAAS
Trigger: ACTGGCGGCGCTTGCCGCCAAGGGGCAGAGCGAGCT...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394466.6
CDS CCA 90 bp TGGCACACAAACTGCACCTGCCTCTGCAGCAGTCGTCACAGAAGCTaGCCCCTTTCCTGGGCTAACTGCTCTGAGAGCACCAGAATGAAA +
Preference number: 5 (lower is better)
Translates to: WHTNCTCLCSSRHRS*PLSWANCSESTRMK
Trigger: TTTCATTCTGGTGCTCTCAGAGCAGTTAGCCCAGGAAAGGGGCCAGCTTCTGTGACGACTGCTGCAGAGGCAGGTGCAGTTTGTGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS GCA 90 bp CTCTGCAGCAGTCGTCACAGAAGCTGGCCCCTTTCCTGGGCTAACTaGTCTGAGAGCACCAGAATGAAATCTGACTTAGATATGACGCAG +
Preference number: 5 (lower is better)
Translates to: LCSSRHRSWPLSWAN*SESTRMKSDLDMTQ
Trigger: CTGCGTCATATCTAAGTCAGATTTCATTCTGGTGCTCTCAGAGCAGTTAGCCCAGGAAAGGGGCCAGCTTCTGTGACGACTGCTGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS-3UTR CAA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCCGAGGAAAGGCTGATTaGGCCCTGCTGTGGGAATCC +
Preference number: 5 (lower is better)
Translates to: PSTLPSLKSDDDSTASVARGKAD*ALLWES
Trigger: GGATTCCCACAGCAGGGCCAAATCAGCCTTTCCTCG...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp AGAGAAGCAAATCCTTTCCTGAAAACCTGGTCACTAATCCTGGGTGGACCAGGTTTCACATTGCCACCGTaGGTGCCAGTCTGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: REANPFLKTWSLILGGPGFTLPP*VPVWPF
Trigger: GAAGGGCCAGACTGGCACCAACGGTGGCAATGTGAA...ACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGGATTTGCTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTTGGGAGGTGGTCCTGTaGTTGCTGTTGAGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESWEVVL*LLLRSW
Trigger: CCAGCTCCTCAACAGCAACAACAGGACCACCTCCCA...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCTGGGAGGTGGTCCTGTaGTTGCTGTTGAGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: PSTLPSLKSDDDSTASVAWEVVL*LLLRSW
Trigger: CCAGCTCCTCAACAGCAACAACAGGACCACCTCCCA...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp CCTGGGTGGACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCGAGAGTGAAACTGCTTaGGACAGATCTGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PGWTRLLENSLGNYETPPESETA*DRSGCC
Trigger: GCAGCAGCCAGATCTGTCCAAAGCAGTTTCACTCTC...GGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGTCCACCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACCGAGGAAAGGCTGATTaGGCCCTGCTGTGGGAATCC +
Preference number: 5 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHRGKAD*ALLWES
Trigger: GGATTCCCACAGCAGGGCCAAATCAGCCTTTCCTCG...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR CAA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTCGAGGAAAGGCTGATTaGGCCCTGCTGTGGGAATCC +
Preference number: 5 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSRGKAD*ALLWES
Trigger: GGATTCCCACAGCAGGGCCAAATCAGCCTTTCCTCG...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp CAAAAACACATTCACCTACAGCTACAGTCAGGGAGTGACCAGCCAAGATGGAAACGAGGAAAGGCTGATTaGGCCCTGCTGTGGGAATCC +
Preference number: 5 (lower is better)
Translates to: QKHIHLQLQSGSDQPRWKRGKAD*ALLWES
Trigger: GGATTCCCACAGCAGGGCCAAATCAGCCTTTCCTCG...TTTCCATCTTGGCTGGTCACTCCCTGACTGTAGCTGTAGGTGAATGTGTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTTTCACATTGCCACCGTaGGTGCCAGTCTGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSFTLPP*VPVWPF
Trigger: GAAGGGCCAGACTGGCACCAACGGTGGCAATGTGAA...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACTTCACATTGCCACCGTaGGTGCCAGTCTGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHFTLPP*VPVWPF
Trigger: GAAGGGCCAGACTGGCACCAACGGTGGCAATGTGAA...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR CAA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCGAGGTGGTCCTGTTGTaGCTGTTGAGGAGCTGGATG +
Preference number: 5 (lower is better)
Translates to: PSTLPSLKSDDDSTASVAEVVLL*LLRSWM
Trigger: CATCCAGCTCCTCAACAGCAACAACAGGACCACCTC...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTTGGGAGGTGGTCCTGTaGTTGCTGTTGAGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSWEVVL*LLLRSW
Trigger: CCAGCTCCTCAACAGCAACAACAGGACCACCTCCCA...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACTGGGAGGTGGTCCTGTaGTTGCTGTTGAGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHWEVVL*LLLRSW
Trigger: CCAGCTCCTCAACAGCAACAACAGGACCACCTCCCA...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR CAA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCCACACCAGGCAGAGTTaGGGAGGTGGTCCTGTTGTT +
Preference number: 5 (lower is better)
Translates to: PSTLPSLKSDDDSTASVAHTRQS*GGGPVV
Trigger: AACAACAGGACCACCTCCCAAACTCTGCCTGGTGTG...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCTCTGGCTGCTGCGCATaGCTTACTGAGCCTTTTGGA +
Preference number: 5 (lower is better)
Translates to: PSTLPSLKSDDDSTASVASGCCA*LTEPFG
Trigger: TCCAAAAGGCTCAGTAAGCAATGCGCAGCAGCCAGA...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCGAGAGTGAAACTGCTTaGGACAGATCTGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PSTLPSLKSDDDSTASVAESETA*DRSGCC
Trigger: GCAGCAGCCAGATCTGTCCAAAGCAGTTTCACTCTC...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp AGAGAAGCAAATCCTTTCCTGAAAACCTGGTCACTAATCCTGGGTGGACCAGGTGAGAGTGAAACTGCTTaGGACAGATCTGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: REANPFLKTWSLILGGPGESETA*DRSGCC
Trigger: GCAGCAGCCAGATCTGTCCAAAGCAGTTTCACTCTC...ACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGGATTTGCTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTTTCACATTGCCACCGTaGGTGCCAGTCTGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIFTLPP*VPVWPF
Trigger: GAAGGGCCAGACTGGCACCAACGGTGGCAATGTGAA...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp CAAACTATTGCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGAGGTGGTCCTGTTGTaGCTGTTGAGGAGCTGGATG +
Preference number: 5 (lower is better)
Translates to: QTIAKLLKLLLSFNCWGREVVLL*LLRSWM
Trigger: CATCCAGCTCCTCAACAGCAACAACAGGACCACCTC...CCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACGAGGTGGTCCTGTTGTaGCTGTTGAGGAGCTGGATG +
Preference number: 5 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHEVVLL*LLRSWM
Trigger: CATCCAGCTCCTCAACAGCAACAACAGGACCACCTC...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR CAA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTTGGGAGGTGGTCCTGTaGTTGCTGTTGAGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIWEVVL*LLLRSW
Trigger: CCAGCTCCTCAACAGCAACAACAGGACCACCTCCCA...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTCACACCAGGCAGAGTTaGGGAGGTGGTCCTGTTGTT +
Preference number: 5 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSHTRQS*GGGPVV
Trigger: AACAACAGGACCACCTCCCAAACTCTGCCTGGTGTG...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp TTTCCTTCATGGCATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATCACACCAGGCAGAGTTaGGGAGGTGGTCCTGTTGTT +
Preference number: 5 (lower is better)
Translates to: FPSWHAQSSSHANYPALHHTRQS*GGGPVV
Trigger: AACAACAGGACCACCTCCCAAACTCTGCCTGGTGTG...ATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATGCCATGAAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp CAAACTATTGCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGCACACCAGGCAGAGTTaGGGAGGTGGTCCTGTTGTT +
Preference number: 5 (lower is better)
Translates to: QTIAKLLKLLLSFNCWGRHTRQS*GGGPVV
Trigger: AACAACAGGACCACCTCCCAAACTCTGCCTGGTGTG...CCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCCGCCCTCCTAACATGTaGAGCGTAGTCATGATCCTC +
Preference number: 5 (lower is better)
Translates to: PSTLPSLKSDDDSTASVARPPNM*SVVMIL
Trigger: GAGGATCATGACTACGCTCAACATGTTAGGAGGGCG...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp AGAGAAGCAAATCCTTTCCTGAAAACCTGGTCACTAATCCTGGGTGGACCAGGTCGCCCTCCTAACATGTaGAGCGTAGTCATGATCCTC +
Preference number: 5 (lower is better)
Translates to: REANPFLKTWSLILGGPGRPPNM*SVVMIL
Trigger: GAGGATCATGACTACGCTCAACATGTTAGGAGGGCG...ACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGGATTTGCTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACGCCCCAGTGCTTCCGTaGGACACATGCGCATTTTAC +
Preference number: 5 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHAPVLP*DTCAFY
Trigger: GTAAAATGCGCATGTGTCCAACGGAAGCACTGGGGC...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS-3UTR CAA 90 bp AAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTAACCCGCTTCTGAAGCTTCTGTaGTCATTCAACTGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: KLLLSFNCWGRAVCESNPLLKLL*SFNCWG
Trigger: CCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG...CGGGTTACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp CCAGCAGGTCACTGGACTAGGTGCTCTATACCAGTTAGGACTGTTAATTTGCACCCTGGGTGGACCAGGTaGCTTGAAAATAGTCTGGGA +
Preference number: 5 (lower is better)
Translates to: PAGHWTRCSIPVRTVNLHPGWTR*LENSLG
Trigger: TCCCAGACTATTTTCAAGCAACCTGGTCCACCCAGG...GTGCAAATTAACAGTCCTAACTGGTATAGAGCACCTAGTCCAGTGACCTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS TCA 90 bp TGCTTTCTTCCAAAAGCTTTAAGTCTGTTTCCCCCGAGGAAAGGCTaGTTTGGCCCTGCTGTGGGAATCCCAGGTCATTTCCCATCACTT +
Preference number: 5 (lower is better)
Translates to: CFLPKALSLFPPRKG*FGPAVGIPGHFPSL
Trigger: AAGTGATGGGAAATGACCTGGGATTCCCACAGCAGGGCCAAATCAGCCTTTCCTCGGGGGAAACAGACTTAAAGCTTTTGGAAGAAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000502500.1
ENST00000502892.5
ENST00000503201.1
ENST00000504572.5
ENST00000508760.5
ENST00000510170.5
ENST00000514699.1
ENST00000652686.1
CDS TCA 90 bp CCAGTCTGGCCCTTCAAATGTTGCTGTTCTGAAGATACATCAGAGTaGGTTTTTGGAAACTCCTTCTCTGTGGGGGCAGCAGACACAGCA +
Preference number: 5 (lower is better)
Translates to: PVWPFKCCCSEDTSE*VFGNSFSVGAADTA
Trigger: TGCTGTGTCTGCTGCCCCCACAGAGAAGGAGTTTCCAAAAACTCACTCTGATGTATCTTCAGAACAGCAACATTTGAAGGGCCAGACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000503201.1
ENST00000504572.5
ENST00000652686.1
CDS GCA 90 bp CTGAAACCTGGTATTGCCTTTGCCCATTTCACTGCTGCAATCACTTaGCGCCCTCCTAACATGTTGAGCGTAGTCATGATCCTCCAAGTT +
Preference number: 5 (lower is better)
Translates to: LKPGIAFAHFTAAIT*RPPNMLSVVMILQV
Trigger: AACTTGGAGGATCATGACTACGCTCAACATGTTAGGAGGGCGGCAAGTGATTGCAGCAGTGAAATGGGCAAAGGCAATACCAGGTTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000503201.1
ENST00000504572.5
ENST00000652686.1
CDS GCA 90 bp ATTTCCCCAGCAGAAGTGAAAGTGATTCGCCTCTACTCAAATGTCTaGATAGGCACAAGAATGAGGGCGAGAGGGAGCAAGAGAAGAGGA +
Preference number: 5 (lower is better)
Translates to: ISPAEVKVIRLYSNV*IGTRMRARGSKRRG
Trigger: TCCTCTTCTCTTGCTCCCTCTCGCCCTCATTCTTGTGCCTATGCAGACATTTGAGTAGAGGCGAATCACTTTCACTTCTGCTGGGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS-3UTR CAA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACTCTGGCTGCTGCGCATaGCTTACTGAGCCTTTTGGA +
Preference number: 5 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHSGCCA*LTEPFG
Trigger: TCCAAAAGGCTCAGTAAGCAATGCGCAGCAGCCAGA...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR CAA 90 bp CAAACTATTGCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGAGAGTGAAACTGCTTaGGACAGATCTGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: QTIAKLLKLLLSFNCWGRESETA*DRSGCC
Trigger: GCAGCAGCCAGATCTGTCCAAAGCAGTTTCACTCTC...CCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACGAGAGTGAAACTGCTTaGGACAGATCTGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHESETA*DRSGCC
Trigger: GCAGCAGCCAGATCTGTCCAAAGCAGTTTCACTCTC...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR CAA 90 bp ATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTAAAGTGTCCTCCTTACCGAGGAAAGGCTGATTaGGCCCTGCTGTGGGAATCC +
Preference number: 5 (lower is better)
Translates to: IVWEITKLHPKGLKCPPYRGKAD*ALLWES
Trigger: GGATTCCCACAGCAGGGCCAAATCAGCCTTTCCTCG...GTAAGGAGGACACTTTAAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp CCTGGGTGGACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCGTATACAATTTCACATaGCCACCGTTGGTGCCAGTC +
Preference number: 5 (lower is better)
Translates to: PGWTRLLENSLGNYETPPVYNFT*PPLVPV
Trigger: GACTGGCACCAACGGTGGCAATGTGAAATTGTATAC...GGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGTCCACCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTCACACCAGGCAGAGTTaGGGAGGTGGTCCTGTTGTT +
Preference number: 5 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIHTRQS*GGGPVV
Trigger: AACAACAGGACCACCTCCCAAACTCTGCCTGGTGTG...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACCGCCCTCCTAACATGTaGAGCGTAGTCATGATCCTC +
Preference number: 5 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHRPPNM*SVVMIL
Trigger: GAGGATCATGACTACGCTCAACATGTTAGGAGGGCG...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR CAA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTCGCCCTCCTAACATGTaGAGCGTAGTCATGATCCTC +
Preference number: 5 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSRPPNM*SVVMIL
Trigger: GAGGATCATGACTACGCTCAACATGTTAGGAGGGCG...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTACTCAACTGCTTCTGTaGCCAAGTCTTGGCCCTCTA +
Preference number: 5 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESTQLLL*PSLGPL
Trigger: TAGAGGGCCAAGACTTGGCAACAGAAGCAGTTGAGT...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCACTCAACTGCTTCTGTaGCCAAGTCTTGGCCCTCTA +
Preference number: 5 (lower is better)
Translates to: PSTLPSLKSDDDSTASVATQLLL*PSLGPL
Trigger: TAGAGGGCCAAGACTTGGCAACAGAAGCAGTTGAGT...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAGGTGCCATCCTTCTTaGACTGTGGAGATTACGTCC +
Preference number: 5 (lower is better)
Translates to: PSTLPSLKSDDDSTASVARCHPS*TVEITS
Trigger: GGACGTAATCTCCACAGTCAAAGAAGGATGGCACCT...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp CCTGGGTGGACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCTTCATCACACAGACTTaGGGCACTGGTGGTTTAGGT +
Preference number: 5 (lower is better)
Translates to: PGWTRLLENSLGNYETPPFITQT*GTGGLG
Trigger: ACCTAAACCACCAGTGCCCAAAGTCTGTGTGATGAA...GGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGTCCACCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CAA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACCCTGGGTGGACCAGGTaGCTTGAAAATAGTCTGGGA +
Preference number: 5 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHPGWTR*LENSLG
Trigger: TCCCAGACTATTTTCAAGCAACCTGGTCCACCCAGG...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS TCA 90 bp ATTGCCACCGTTGGTGCCAGTCTGGCCCTTCAAATGTTGCTGTTCTaGAGATACATCAGAGTGAGTTTTTGGAAACTCCTTCTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: IATVGASLALQMLLF*RYIRVSFWKLLLCG
Trigger: CCCACAGAGAAGGAGTTTCCAAAAACTCACTCTGATGTATCTTCAGAACAGCAACATTTGAAGGGCCAGACTGGCACCAACGGTGGCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000503201.1
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp CCTGGGTGGACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCCATCAGAGTGAGTTTTaGGAAACTCCTTCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: PGWTRLLENSLGNYETPPHQSEF*ETPSLW
Trigger: CCACAGAGAAGGAGTTTCCAAAAACTCACTCTGATG...GGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGTCCACCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp GCACAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATTTCACATTGCCACCGTaGGTGCCAGTCTGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: AQLLFPFNEKPPIVVDEHFTLPP*VPVWPF
Trigger: GAAGGGCCAGACTGGCACCAACGGTGGCAATGTGAA...ATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCGTATACAATTTCACATaGCCACCGTTGGTGCCAGTC +
Preference number: 5 (lower is better)
Translates to: PSTLPSLKSDDDSTASVAVYNFT*PPLVPV
Trigger: GACTGGCACCAACGGTGGCAATGTGAAATTGTATAC...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp GCACAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATTGGGAGGTGGTCCTGTaGTTGCTGTTGAGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: AQLLFPFNEKPPIVVDEHWEVVL*LLLRSW
Trigger: CCAGCTCCTCAACAGCAACAACAGGACCACCTCCCA...ATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTCGCCCTCCTAACATGTaGAGCGTAGTCATGATCCTC +
Preference number: 5 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIRPPNM*SVVMIL
Trigger: GAGGATCATGACTACGCTCAACATGTTAGGAGGGCG...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp CCAGCAGGTCACTGGACTAGGTGCTCTATACCAGTTAGGACTGTTAATTTGCACAACCTGGTATTGCCTTaGCCCATTTCACTGCTGCAA +
Preference number: 5 (lower is better)
Translates to: PAGHWTRCSIPVRTVNLHNLVLP*PISLLQ
Trigger: TTGCAGCAGTGAAATGGGCAAAGGCAATACCAGGTT...GTGCAAATTAACAGTCCTAACTGGTATAGAGCACCTAGTCCAGTGACCTGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTGAGTTTCCTTCCCTCTaGACAATGGCTTTTCCTAGC +
Preference number: 5 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESEFPSL*TMAFPS
Trigger: GCTAGGAAAAGCCATTGTCAAGAGGGAAGGAAACTC...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTACTCAACTGCTTCTGTaGCCAAGTCTTGGCCCTCTA +
Preference number: 5 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSTQLLL*PSLGPL
Trigger: TAGAGGGCCAAGACTTGGCAACAGAAGCAGTTGAGT...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACACTCAACTGCTTCTGTaGCCAAGTCTTGGCCCTCTA +
Preference number: 5 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHTQLLL*PSLGPL
Trigger: TAGAGGGCCAAGACTTGGCAACAGAAGCAGTTGAGT...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR CAA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTAGGTGCCATCCTTCTTaGACTGTGGAGATTACGTCC +
Preference number: 5 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSRCHPS*TVEITS
Trigger: GGACGTAATCTCCACAGTCAAAGAAGGATGGCACCT...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp CAAACTATTGCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGAGGTGCCATCCTTCTTaGACTGTGGAGATTACGTCC +
Preference number: 5 (lower is better)
Translates to: QTIAKLLKLLLSFNCWGRRCHPS*TVEITS
Trigger: GGACGTAATCTCCACAGTCAAAGAAGGATGGCACCT...CCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCTTCATCACACAGACTTaGGGCACTGGTGGTTTAGGT +
Preference number: 5 (lower is better)
Translates to: PSTLPSLKSDDDSTASVAFITQT*GTGGLG
Trigger: ACCTAAACCACCAGTGCCCAAAGTCTGTGTGATGAA...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTGGTAGGAGCTGCATTTaGTTCCTCCCCATTCTCGCA +
Preference number: 5 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIGRSCI*FLPILA
Trigger: TGCGAGAATGGGGAGGAACAAAATGCAGCTCCTACC...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000504572.5
CDS-3UTR CAA 90 bp AGAGAAGCAAATCCTTTCCTGAAAACCTGGTCACTAATCCTGGGTGGACCAGGTCCTAGAGCAAACTGTTaGGTTTCTGAGACCATCGCT +
Preference number: 5 (lower is better)
Translates to: REANPFLKTWSLILGGPGPRANC*VSETIA
Trigger: AGCGATGGTCTCAGAAACCAAACAGTTTGCTCTAGG...ACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGGATTTGCTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CAA 90 bp CAAAAACACATTCACCTACAGCTACAGTCAGGGAGTGACCAGCCAAGATGGAAACTTCTGAAGCTTCTGTaGTCATTCAACTGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: QKHIHLQLQSGSDQPRWKLLKLL*SFNCWG
Trigger: CCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG...TTTCCATCTTGGCTGGTCACTCCCTGACTGTAGCTGTAGGTGAATGTGTTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CAA 90 bp TTTCCTTCATGGCATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATCTTCTGAAGCTTCTGTaGTCATTCAACTGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: FPSWHAQSSSHANYPALHLLKLL*SFNCWG
Trigger: CCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG...ATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATGCCATGAAGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CAA 90 bp CCTGGGTGGACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCACAAACTTCAACAGTTaGGGTTGGGATGGCCAGATA +
Preference number: 5 (lower is better)
Translates to: PGWTRLLENSLGNYETPPTNFNS*GWDGQI
Trigger: TATCTGGCCATCCCAACCCAAACTGTTGAAGTTTGT...GGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGTCCACCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp CCTGGGTGGACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCATGTTAGTTTTCCTTTaGGGGTGGCCAAGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: PGWTRLLENSLGNYETPPMLVFL*GWPRFP
Trigger: AGGAAACCTTGGCCACCCCAAAAGGAAAACTAACAT...GGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGTCCACCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS GCA 90 bp AGGTGCTTTGGTCTGTGGTATACAATTTCACATTGCCACCGTTGGTaGCAGTCTGGCCCTTCAAATGTTGCTGTTCTGAAGATACATCAG +
Preference number: 5 (lower is better)
Translates to: RCFGLWYTISHCHRW*QSGPSNVAVLKIHQ
Trigger: CTGATGTATCTTCAGAACAGCAACATTTGAAGGGCCAGACTGGCACCAACGGTGGCAATGTGAAATTGTATACCACAGACCAAAGCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000503201.1
ENST00000504572.5
ENST00000652686.1
CDS GCA 90 bp GCAAAATGTCAAAGGTGCTTTGGTCTGTGGTATACAATTTCACATTaGCACCGTTGGTGCCAGTCTGGCCCTTCAAATGTTGCTGTTCTG +
Preference number: 5 (lower is better)
Translates to: AKCQRCFGLWYTISH*HRWCQSGPSNVAVL
Trigger: CAGAACAGCAACATTTGAAGGGCCAGACTGGCACCAACGGTGGCAATGTGAAATTGTATACCACAGACCAAAGCACCTTTGACATTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000503201.1
ENST00000504572.5
ENST00000652686.1
CDS GCA 90 bp ATTCCTGTTATTAAGGTACAACTAAAGCCCGAGGAGGGTAGGAGCTaGATTTTGTTCCTCCCCATTCTCGCACAGAGAAGGCACTCATTA +
Preference number: 5 (lower is better)
Translates to: IPVIKVQLKPEEGRS*ILFLPILAQRRHSL
Trigger: TAATGAGTGCCTTCTCTGTGCGAGAATGGGGAGGAACAAAATGCAGCTCCTACCCTCCTCGGGCTTTAGTTGTACCTTAATAACAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343796.6
ENST00000503701.1
ENST00000504572.5
ENST00000505058.5
CDS-3UTR CAA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCACACTGGTCGACCTATaGAGGTTTGCAATGCTTTCT +
Preference number: 5 (lower is better)
Translates to: PSTLPSLKSDDDSTASVATLVDL*RFAMLS
Trigger: AGAAAGCATTGCAAACCTCAATAGGTCGACCAGTGT...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCCATCAGAGTGAGTTTTaGGAAACTCCTTCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: PSTLPSLKSDDDSTASVAHQSEF*ETPSLW
Trigger: CCACAGAGAAGGAGTTTCCAAAAACTCACTCTGATG...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp CTAACATTTACTGCCAATTCGGTACAAATGTGTGGTTTGGTAATACCAGAACAGTTCACATTGCCACCGTaGGTGCCAGTCTGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: LTFTANSVQMCGLVIPEQFTLPP*VPVWPF
Trigger: GAAGGGCCAGACTGGCACCAACGGTGGCAATGTGAA...CTGTTCTGGTATTACCAAACCACACATTTGTACCGAATTGGCAGTAAATGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp TTTCCTTCATGGCATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATGTATACAATTTCACATaGCCACCGTTGGTGCCAGTC +
Preference number: 5 (lower is better)
Translates to: FPSWHAQSSSHANYPALHVYNFT*PPLVPV
Trigger: GACTGGCACCAACGGTGGCAATGTGAAATTGTATAC...ATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATGCCATGAAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTGTATACAATTTCACATaGCCACCGTTGGTGCCAGTC +
Preference number: 5 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSVYNFT*PPLVPV
Trigger: GACTGGCACCAACGGTGGCAATGTGAAATTGTATAC...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp GCACAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATCACACCAGGCAGAGTTaGGGAGGTGGTCCTGTTGTT +
Preference number: 5 (lower is better)
Translates to: AQLLFPFNEKPPIVVDEHHTRQS*GGGPVV
Trigger: AACAACAGGACCACCTCCCAAACTCTGCCTGGTGTG...ATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp ACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTCGCCCTCCTAACATGTaGAGCGTAGTCATGATCCTC +
Preference number: 5 (lower is better)
Translates to: TRLLENSLGNYETPPKGFRPPNM*SVVMIL
Trigger: GAGGATCATGACTACGCTCAACATGTTAGGAGGGCG...AAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTAACCTGGTATTGCCTTaGCCCATTTCACTGCTGCAA +
Preference number: 5 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSNLVLP*PISLLQ
Trigger: TTGCAGCAGTGAAATGGGCAAAGGCAATACCAGGTT...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp CAAAAACACATTCACCTACAGCTACAGTCAGGGAGTGACCAGCCAAGATGGAAAAACCTGGTATTGCCTTaGCCCATTTCACTGCTGCAA +
Preference number: 5 (lower is better)
Translates to: QKHIHLQLQSGSDQPRWKNLVLP*PISLLQ
Trigger: TTGCAGCAGTGAAATGGGCAAAGGCAATACCAGGTT...TTTCCATCTTGGCTGGTCACTCCCTGACTGTAGCTGTAGGTGAATGTGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp TTTCCTTCATGGCATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATGAGTTTCCTTCCCTCTaGACAATGGCTTTTCCTAGC +
Preference number: 5 (lower is better)
Translates to: FPSWHAQSSSHANYPALHEFPSL*TMAFPS
Trigger: GCTAGGAAAAGCCATTGTCAAGAGGGAAGGAAACTC...ATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATGCCATGAAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp AAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTAACCCGCAAGAGTTTTGTCAGTaGATAAAACCGCTGCCAGTT +
Preference number: 5 (lower is better)
Translates to: KLLLSFNCWGRAVCESNPQEFCQ*IKPLPV
Trigger: AACTGGCAGCGGTTTTATCAACTGACAAAACTCTTG...CGGGTTACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTTTCTGTTGCCAAGTCTaGGCCCTCTATAAACCACAT +
Preference number: 5 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESFCCQV*ALYKPH
Trigger: ATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAA...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp CATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATAGACACAAATCAACTCAACTGCTTCTGTaGCCAAGTCTTGGCCCTCTA +
Preference number: 5 (lower is better)
Translates to: HAQSSSHANYPALHRHKSTQLLL*PSLGPL
Trigger: TAGAGGGCCAAGACTTGGCAACAGAAGCAGTTGAGT...TGATTTGTGTCTATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CAA 90 bp CATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATAGACACAAATCAAGGTGCCATCCTTCTTaGACTGTGGAGATTACGTCC +
Preference number: 5 (lower is better)
Translates to: HAQSSSHANYPALHRHKSRCHPS*TVEITS
Trigger: GGACGTAATCTCCACAGTCAAAGAAGGATGGCACCT...TGATTTGTGTCTATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CAA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACTTCATCACACAGACTTaGGGCACTGGTGGTTTAGGT +
Preference number: 5 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHFITQT*GTGGLG
Trigger: ACCTAAACCACCAGTGCCCAAAGTCTGTGTGATGAA...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR CAA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTTTCATCACACAGACTTaGGGCACTGGTGGTTTAGGT +
Preference number: 5 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSFITQT*GTGGLG
Trigger: ACCTAAACCACCAGTGCCCAAAGTCTGTGTGATGAA...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTCTTCAACAGTTTGGGTaGGGATGGCCAGATAACACA +
Preference number: 5 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSLQQFG*GWPDNT
Trigger: TGTGTTATCTGGCCATCCCAACCCAAACTGTTGAAG...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CAA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACCTTCAACAGTTTGGGTaGGGATGGCCAGATAACACA +
Preference number: 5 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHLQQFG*GWPDNT
Trigger: TGTGTTATCTGGCCATCCCAACCCAAACTGTTGAAG...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CAA 90 bp CCAGCAGGTCACTGGACTAGGTGCTCTATACCAGTTAGGACTGTTAATTTGCACGTGCCTCAGTTCTGCTaGTATAGTATCCCACAGAAT +
Preference number: 5 (lower is better)
Translates to: PAGHWTRCSIPVRTVNLHVPQFC*YSIPQN
Trigger: ATTCTGTGGGATACTATACAAGCAGAACTGAGGCAC...GTGCAAATTAACAGTCCTAACTGGTATAGAGCACCTAGTCCAGTGACCTGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CAA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTATGTTAGTTTTCCTTTaGGGGTGGCCAAGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESMLVFL*GWPRFP
Trigger: AGGAAACCTTGGCCACCCCAAAAGGAAAACTAACAT...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS TCA 90 bp GACTCTCCTAATTATGGTGAATTTCCTAGTTCAGCTCAGAGCCACTaGTTCAGCAGATATTCCCCCAGGCAGATCCTAATGGAAACCAAC +
Preference number: 5 (lower is better)
Translates to: DSPNYGEFPSSAQSH*FSRYSPRQILMETN
Trigger: GTTGGTTTCCATTAGGATCTGCCTGGGGGAATATCTGCTGAATCAGTGGCTCTGAGCTGAACTAGGAAATTCACCATAATTAGGAGAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS CCA 90 bp CAAAGGTGCTTTGGTCTGTGGTATACAATTTCACATTGCCACCGTTaGTGCCAGTCTGGCCCTTCAAATGTTGCTGTTCTGAAGATACAT +
Preference number: 5 (lower is better)
Translates to: QRCFGLWYTISHCHR*CQSGPSNVAVLKIH
Trigger: ATGTATCTTCAGAACAGCAACATTTGAAGGGCCAGACTGGCACCAACGGTGGCAATGTGAAATTGTATACCACAGACCAAAGCACCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000503201.1
ENST00000504572.5
ENST00000652686.1
CDS CCA 90 bp AAGAAAACTCCAAATCCTGCAAAATGTCAAAGGTGCTTTGGTCTGTaGTATACAATTTCACATTGCCACCGTTGGTGCCAGTCTGGCCCT +
Preference number: 5 (lower is better)
Translates to: KKTPNPAKCQRCFGL*YTISHCHRWCQSGP
Trigger: AGGGCCAGACTGGCACCAACGGTGGCAATGTGAAATTGTATACCACAGACCAAAGCACCTTTGACATTTTGCAGGATTTGGAGTTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000503201.1
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp AAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTAACCCGTGCTTACTGAGCCTTTaGGAAAATCAACCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: KLLLSFNCWGRAVCESNPCLLSL*ENQPKV
Trigger: GACTTTTGGTTGATTTTCCAAAAGGCTCAGTAAGCA...CGGGTTACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTCCATATACAGTCCCATaGAGAGTGAAACTGCTTTGG +
Preference number: 5 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSPYTVP*RVKLLW
Trigger: CCAAAGCAGTTTCACTCTCAATGGGACTGTATATGG...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp TTTCCTTCATGGCATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATCCATATACAGTCCCATaGAGAGTGAAACTGCTTTGG +
Preference number: 5 (lower is better)
Translates to: FPSWHAQSSSHANYPALHPYTVP*RVKLLW
Trigger: CCAAAGCAGTTTCACTCTCAATGGGACTGTATATGG...ATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATGCCATGAAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp CAAACTATTGCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGCCATATACAGTCCCATaGAGAGTGAAACTGCTTTGG +
Preference number: 5 (lower is better)
Translates to: QTIAKLLKLLLSFNCWGRPYTVP*RVKLLW
Trigger: CCAAAGCAGTTTCACTCTCAATGGGACTGTATATGG...CCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACCCATATACAGTCCCATaGAGAGTGAAACTGCTTTGG +
Preference number: 5 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHPYTVP*RVKLLW
Trigger: CCAAAGCAGTTTCACTCTCAATGGGACTGTATATGG...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR CAA 90 bp TTTCCTTCATGGCATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATACACTGGTCGACCTATaGAGGTTTGCAATGCTTTCT +
Preference number: 5 (lower is better)
Translates to: FPSWHAQSSSHANYPALHTLVDL*RFAMLS
Trigger: AGAAAGCATTGCAAACCTCAATAGGTCGACCAGTGT...ATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATGCCATGAAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp CAAACTATTGCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGACACTGGTCGACCTATaGAGGTTTGCAATGCTTTCT +
Preference number: 5 (lower is better)
Translates to: QTIAKLLKLLLSFNCWGRTLVDL*RFAMLS
Trigger: AGAAAGCATTGCAAACCTCAATAGGTCGACCAGTGT...CCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACACACTGGTCGACCTATaGAGGTTTGCAATGCTTTCT +
Preference number: 5 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHTLVDL*RFAMLS
Trigger: AGAAAGCATTGCAAACCTCAATAGGTCGACCAGTGT...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR CAA 90 bp CAAACTATTGCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGCATCAGAGTGAGTTTTaGGAAACTCCTTCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: QTIAKLLKLLLSFNCWGRHQSEF*ETPSLW
Trigger: CCACAGAGAAGGAGTTTCCAAAAACTCACTCTGATG...CCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTCATCAGAGTGAGTTTTaGGAAACTCCTTCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSHQSEF*ETPSLW
Trigger: CCACAGAGAAGGAGTTTCCAAAAACTCACTCTGATG...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTGTATACAATTTCACATaGCCACCGTTGGTGCCAGTC +
Preference number: 5 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIVYNFT*PPLVPV
Trigger: GACTGGCACCAACGGTGGCAATGTGAAATTGTATAC...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTAACCTGGTATTGCCTTaGCCCATTTCACTGCTGCAA +
Preference number: 5 (lower is better)
Translates to: NCFCCQVLALYKPHVVRINLVLP*PISLLQ
Trigger: TTGCAGCAGTGAAATGGGCAAAGGCAATACCAGGTT...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTGAGTTTCCTTCCCTCTaGACAATGGCTTTTCCTAGC +
Preference number: 5 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIEFPSL*TMAFPS
Trigger: GCTAGGAAAAGCCATTGTCAAGAGGGAAGGAAACTC...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCCAAGAGTTTTGTCAGTaGATAAAACCGCTGCCAGTT +
Preference number: 5 (lower is better)
Translates to: PSTLPSLKSDDDSTASVAQEFCQ*IKPLPV
Trigger: AACTGGCAGCGGTTTTATCAACTGACAAAACTCTTG...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp CCAGCAGGTCACTGGACTAGGTGCTCTATACCAGTTAGGACTGTTAATTTGCACCAAGAGTTTTGTCAGTaGATAAAACCGCTGCCAGTT +
Preference number: 5 (lower is better)
Translates to: PAGHWTRCSIPVRTVNLHQEFCQ*IKPLPV
Trigger: AACTGGCAGCGGTTTTATCAACTGACAAAACTCTTG...GTGCAAATTAACAGTCCTAACTGGTATAGAGCACCTAGTCCAGTGACCTGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp CAAACTATTGCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGTTCTGTTGCCAAGTCTaGGCCCTCTATAAACCACAT +
Preference number: 5 (lower is better)
Translates to: QTIAKLLKLLLSFNCWGRFCCQV*ALYKPH
Trigger: ATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAA...CCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTTTCTGTTGCCAAGTCTaGGCCCTCTATAAACCACAT +
Preference number: 5 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSFCCQV*ALYKPH
Trigger: ATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAA...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTTTCATCACACAGACTTaGGGCACTGGTGGTTTAGGT +
Preference number: 5 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIFITQT*GTGGLG
Trigger: ACCTAAACCACCAGTGCCCAAAGTCTGTGTGATGAA...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp CAAAAACACATTCACCTACAGCTACAGTCAGGGAGTGACCAGCCAAGATGGAAAAGGAAGAGGTACCTTTaGAATGGGGTGAAAGCAAAC +
Preference number: 5 (lower is better)
Translates to: QKHIHLQLQSGSDQPRWKRKRYL*NGVKAN
Trigger: GTTTGCTTTCACCCCATTCAAAAGGTACCTCTTCCT...TTTCCATCTTGGCTGGTCACTCCCTGACTGTAGCTGTAGGTGAATGTGTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS-3UTR CAA 90 bp CCTGGGTGGACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCATTGAGTTCTATTTTTaGAGCGCCAAGATTGTTGGG +
Preference number: 5 (lower is better)
Translates to: PGWTRLLENSLGNYETPPIEFYF*SAKIVG
Trigger: CCCAACAATCTTGGCGCTCAAAAAATAGAACTCAAT...GGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGTCCACCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp CAAACTATTGCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGGGATGCAATTATATTaGCTCCAGGAAAGCTTGCCT +
Preference number: 5 (lower is better)
Translates to: QTIAKLLKLLLSFNCWGRGMQLY*LQESLP
Trigger: AGGCAAGCTTTCCTGGAGCAAATATAATTGCATCCC...CCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424646.6
CDS GCA 90 bp TTACACGATTCTCTCTCATGTAGATGGTTATGGCAGCTTCCTGACTaGTCTCCTTCCTTCCACACTTGCCCATCTACAGTTAATTCTTCA +
Preference number: 5 (lower is better)
Translates to: LHDSLSCRWLWQLPD*SPSFHTCPSTVNSS
Trigger: TGAAGAATTAACTGTAGATGGGCAAGTGTGGAAGGAAGGAGAGCAGTCAGGAAGCTGCCATAACCATCTACATGAGAGAGAATCGTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503701.1
CDS-3UTR CAA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCTGCTTACTGAGCCTTTaGGAAAATCAACCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: PSTLPSLKSDDDSTASVACLLSL*ENQPKV
Trigger: GACTTTTGGTTGATTTTCCAAAAGGCTCAGTAAGCA...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp CTAACATTTACTGCCAATTCGGTACAAATGTGTGGTTTGGTAATACCAGAACAGTCTGGCTGCTGCGCATaGCTTACTGAGCCTTTTGGA +
Preference number: 5 (lower is better)
Translates to: LTFTANSVQMCGLVIPEQSGCCA*LTEPFG
Trigger: TCCAAAAGGCTCAGTAAGCAATGCGCAGCAGCCAGA...CTGTTCTGGTATTACCAAACCACACATTTGTACCGAATTGGCAGTAAATGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp ACAGTGAAGAAATTCACAGGACTTGTGTTAAACTCTATGGCACACATTAGGGATTCTGGCTGCTGCGCATaGCTTACTGAGCCTTTTGGA +
Preference number: 5 (lower is better)
Translates to: TVKKFTGLVLNSMAHIRDSGCCA*LTEPFG
Trigger: TCCAAAAGGCTCAGTAAGCAATGCGCAGCAGCCAGA...ATCCCTAATGTGTGCCATAGAGTTTAACACAAGTCCTGTGAATTTCTTCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTCCATATACAGTCCCATaGAGAGTGAAACTGCTTTGG +
Preference number: 5 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIPYTVP*RVKLLW
Trigger: CCAAAGCAGTTTCACTCTCAATGGGACTGTATATGG...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTACACTGGTCGACCTATaGAGGTTTGCAATGCTTTCT +
Preference number: 5 (lower is better)
Translates to: NCFCCQVLALYKPHVVRITLVDL*RFAMLS
Trigger: AGAAAGCATTGCAAACCTCAATAGGTCGACCAGTGT...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTCATCAGAGTGAGTTTTaGGAAACTCCTTCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIHQSEF*ETPSLW
Trigger: CCACAGAGAAGGAGTTTCCAAAAACTCACTCTGATG...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp ACTACTTCAAAAGGTCCTGAAAGACAAATAGTTTACCAGCTTTCTTGCCATATATTCACATTGCCACCGTaGGTGCCAGTCTGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: TTSKGPERQIVYQLSCHIFTLPP*VPVWPF
Trigger: GAAGGGCCAGACTGGCACCAACGGTGGCAATGTGAA...TATATGGCAAGAAAGCTGGTAAACTATTTGTCTTTCAGGACCTTTTGAAGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp ACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTGTATACAATTTCACATaGCCACCGTTGGTGCCAGTC +
Preference number: 5 (lower is better)
Translates to: TRLLENSLGNYETPPKGFVYNFT*PPLVPV
Trigger: GACTGGCACCAACGGTGGCAATGTGAAATTGTATAC...AAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp GGATTTGTTGTGAGTAACCAACTCTCACTGAAGTTACTACAAACTTCAACAGTTGAGGTGGTCCTGTTGTaGCTGTTGAGGAGCTGGATG +
Preference number: 5 (lower is better)
Translates to: GFVVSNQLSLKLLQTSTVEVVLL*LLRSWM
Trigger: CATCCAGCTCCTCAACAGCAACAACAGGACCACCTC...AACTGTTGAAGTTTGTAGTAACTTCAGTGAGAGTTGGTTACTCACAACAAATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp TCTATACCAGTTAGGACTGTTAATTTGCACAACCTATATAATTCTCCACTGAAGTGGGAGGTGGTCCTGTaGTTGCTGTTGAGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: SIPVRTVNLHNLYNSPLKWEVVL*LLLRSW
Trigger: CCAGCTCCTCAACAGCAACAACAGGACCACCTCCCA...CTTCAGTGGAGAATTATATAGGTTGTGCAAATTAACAGTCCTAACTGGTATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp ATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTAAAGTGTCCTCCTTACAACCTGGTATTGCCTTaGCCCATTTCACTGCTGCAA +
Preference number: 5 (lower is better)
Translates to: IVWEITKLHPKGLKCPPYNLVLP*PISLLQ
Trigger: TTGCAGCAGTGAAATGGGCAAAGGCAATACCAGGTT...GTAAGGAGGACACTTTAAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACCAAGAGTTTTGTCAGTaGATAAAACCGCTGCCAGTT +
Preference number: 5 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHQEFCQ*IKPLPV
Trigger: AACTGGCAGCGGTTTTATCAACTGACAAAACTCTTG...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR CAA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTTTCTGTTGCCAAGTCTaGGCCCTCTATAAACCACAT +
Preference number: 5 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIFCCQV*ALYKPH
Trigger: ATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAA...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp AAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTAACCCGATGTTTAGAGTTTATTaGGGAAAGCTACGAACTAGC +
Preference number: 5 (lower is better)
Translates to: KLLLSFNCWGRAVCESNPMFRVY*GKLRTS
Trigger: GCTAGTTCGTAGCTTTCCCAAATAAACTCTAAACAT...CGGGTTACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp ACAGTGAAGAAATTCACAGGACTTGTGTTAAACTCTATGGCACACATTAGGGATGGTAGGAGCTGCATTTaGTTCCTCCCCATTCTCGCA +
Preference number: 5 (lower is better)
Translates to: TVKKFTGLVLNSMAHIRDGRSCI*FLPILA
Trigger: TGCGAGAATGGGGAGGAACAAAATGCAGCTCCTACC...ATCCCTAATGTGTGCCATAGAGTTTAACACAAGTCCTGTGAATTTCTTCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS-3UTR CAA 90 bp CAAAAACACATTCACCTACAGCTACAGTCAGGGAGTGACCAGCCAAGATGGAAAGGAAAGATTAACCAATaGGTGACAGATGGGAATGTG +
Preference number: 5 (lower is better)
Translates to: QKHIHLQLQSGSDQPRWKGKINQ*VTDGNV
Trigger: CACATTCCCATCTGTCACCAATTGGTTAATCTTTCC...TTTCCATCTTGGCTGGTCACTCCCTGACTGTAGCTGTAGGTGAATGTGTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CAA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACGGAAAGATTAACCAATaGGTGACAGATGGGAATGTG +
Preference number: 5 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHGKINQ*VTDGNV
Trigger: CACATTCCCATCTGTCACCAATTGGTTAATCTTTCC...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTGGAAAGATTAACCAATaGGTGACAGATGGGAATGTG +
Preference number: 5 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSGKINQ*VTDGNV
Trigger: CACATTCCCATCTGTCACCAATTGGTTAATCTTTCC...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp CATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATAGACACAAATCAACAAACTTCAACAGTTaGGGTTGGGATGGCCAGATA +
Preference number: 5 (lower is better)
Translates to: HAQSSSHANYPALHRHKSTNFNS*GWDGQI
Trigger: TATCTGGCCATCCCAACCCAAACTGTTGAAGTTTGT...TGATTTGTGTCTATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp CTAACATTTACTGCCAATTCGGTACAAATGTGTGGTTTGGTAATACCAGAACAGCCTGGGTGGACCAGGTaGCTTGAAAATAGTCTGGGA +
Preference number: 5 (lower is better)
Translates to: LTFTANSVQMCGLVIPEQPGWTR*LENSLG
Trigger: TCCCAGACTATTTTCAAGCAACCTGGTCCACCCAGG...CTGTTCTGGTATTACCAAACCACACATTTGTACCGAATTGGCAGTAAATGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp CTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGGCTGTATGTGAAAGTGGAGTTAATGATTCTTaGGAGTCCATCAGTGAATAT +
Preference number: 5 (lower is better)
Translates to: LLKLLLSFNCWGRAVCESGVNDS*ESISEY
Trigger: ATATTCACTGATGGACTCCAAAGAATCATTAACTCC...ACTTTCACATACAGCCCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp TTTCCTTCATGGCATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATTGCTTACTGAGCCTTTaGGAAAATCAACCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: FPSWHAQSSSHANYPALHCLLSL*ENQPKV
Trigger: GACTTTTGGTTGATTTTCCAAAAGGCTCAGTAAGCA...ATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATGCCATGAAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp CAAAAACACATTCACCTACAGCTACAGTCAGGGAGTGACCAGCCAAGATGGAAATGCTTACTGAGCCTTTaGGAAAATCAACCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: QKHIHLQLQSGSDQPRWKCLLSL*ENQPKV
Trigger: GACTTTTGGTTGATTTTCCAAAAGGCTCAGTAAGCA...TTTCCATCTTGGCTGGTCACTCCCTGACTGTAGCTGTAGGTGAATGTGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTTGCTTACTGAGCCTTTaGGAAAATCAACCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSCLLSL*ENQPKV
Trigger: GACTTTTGGTTGATTTTCCAAAAGGCTCAGTAAGCA...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp ATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTAAAGTGTCCTCCTTACACACTGGTCGACCTATaGAGGTTTGCAATGCTTTCT +
Preference number: 5 (lower is better)
Translates to: IVWEITKLHPKGLKCPPYTLVDL*RFAMLS
Trigger: AGAAAGCATTGCAAACCTCAATAGGTCGACCAGTGT...GTAAGGAGGACACTTTAAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAATGTCAAAGGTGCTTaGGTCTGTGGTATACAATTT +
Preference number: 5 (lower is better)
Translates to: PSTLPSLKSDDDSTASVANVKGA*VCGIQF
Trigger: AAATTGTATACCACAGACCAAAGCACCTTTGACATT...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp ACTACTTCAAAAGGTCCTGAAAGACAAATAGTTTACCAGCTTTCTTGCCATATACACACCAGGCAGAGTTaGGGAGGTGGTCCTGTTGTT +
Preference number: 5 (lower is better)
Translates to: TTSKGPERQIVYQLSCHIHTRQS*GGGPVV
Trigger: AACAACAGGACCACCTCCCAAACTCTGCCTGGTGTG...TATATGGCAAGAAAGCTGGTAAACTATTTGTCTTTCAGGACCTTTTGAAGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCACGTTGCAGGAACTATaGTTTTGTTACCAGGATTTT +
Preference number: 5 (lower is better)
Translates to: PSTLPSLKSDDDSTASVATLQEL*FCYQDF
Trigger: AAAATCCTGGTAACAAAACAATAGTTCCTGCAACGT...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR CAA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTCAAAACACAGCAGGTTaGCACTTGATTGTCTATATG +
Preference number: 5 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSQNTAG*HLIVYM
Trigger: CATATAGACAATCAAGTGCAAACCTGCTGTGTTTTG...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACCAAAACACAGCAGGTTaGCACTTGATTGTCTATATG +
Preference number: 5 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHQNTAG*HLIVYM
Trigger: CATATAGACAATCAAGTGCAAACCTGCTGTGTTTTG...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR CAA 90 bp TTTCCTTCATGGCATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATCAAAACACAGCAGGTTaGCACTTGATTGTCTATATG +
Preference number: 5 (lower is better)
Translates to: FPSWHAQSSSHANYPALHQNTAG*HLIVYM
Trigger: CATATAGACAATCAAGTGCAAACCTGCTGTGTTTTG...ATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATGCCATGAAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTCAAGAGTTTTGTCAGTaGATAAAACCGCTGCCAGTT +
Preference number: 5 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIQEFCQ*IKPLPV
Trigger: AACTGGCAGCGGTTTTATCAACTGACAAAACTCTTG...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp CTAACATTTACTGCCAATTCGGTACAAATGTGTGGTTTGGTAATACCAGAACAGAGGTGCCATCCTTCTTaGACTGTGGAGATTACGTCC +
Preference number: 5 (lower is better)
Translates to: LTFTANSVQMCGLVIPEQRCHPS*TVEITS
Trigger: GGACGTAATCTCCACAGTCAAAGAAGGATGGCACCT...CTGTTCTGGTATTACCAAACCACACATTTGTACCGAATTGGCAGTAAATGTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CAA 90 bp CCATCTACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCATGTTTAGAGTTTATTaGGGAAAGCTACGAACTAGC +
Preference number: 5 (lower is better)
Translates to: PSTLPSLKSDDDSTASVAMFRVY*GKLRTS
Trigger: GCTAGTTCGTAGCTTTCCCAAATAAACTCTAAACAT...GGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGTAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp AGAGAAGCAAATCCTTTCCTGAAAACCTGGTCACTAATCCTGGGTGGACCAGGTTGCACTATTTACATATaGCTGGTACCTCTATGCAAA +
Preference number: 5 (lower is better)
Translates to: REANPFLKTWSLILGGPGCTIYI*LVPLCK
Trigger: TTTGCATAGAGGTACCAGCAATATGTAAATAGTGCA...ACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGGATTTGCTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CAA 90 bp AGAGAAGCAAATCCTTTCCTGAAAACCTGGTCACTAATCCTGGGTGGACCAGGTGGAATTAGTGTATTATaGGCAACCTATGAGATTCTG +
Preference number: 5 (lower is better)
Translates to: REANPFLKTWSLILGGPGGISVL*ATYEIL
Trigger: CAGAATCTCATAGGTTGCCAATAATACACTAATTCC...ACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGGATTTGCTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CAA 90 bp CAAAAACACATTCACCTACAGCTACAGTCAGGGAGTGACCAGCCAAGATGGAAAATTGAGTTCTATTTTTaGAGCGCCAAGATTGTTGGG +
Preference number: 5 (lower is better)
Translates to: QKHIHLQLQSGSDQPRWKIEFYF*SAKIVG
Trigger: CCCAACAATCTTGGCGCTCAAAAAATAGAACTCAAT...TTTCCATCTTGGCTGGTCACTCCCTGACTGTAGCTGTAGGTGAATGTGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp GCACAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATCTTCAACAGTTTGGGTaGGGATGGCCAGATAACACA +
Preference number: 5 (lower is better)
Translates to: AQLLFPFNEKPPIVVDEHLQQFG*GWPDNT
Trigger: TGTGTTATCTGGCCATCCCAACCCAAACTGTTGAAG...ATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp ATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTAAAGTGTCCTCCTTACACAAACTTCAACAGTTaGGGTTGGGATGGCCAGATA +
Preference number: 5 (lower is better)
Translates to: IVWEITKLHPKGLKCPPYTNFNS*GWDGQI
Trigger: TATCTGGCCATCCCAACCCAAACTGTTGAAGTTTGT...GTAAGGAGGACACTTTAAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp AGAGAAGCAAATCCTTTCCTGAAAACCTGGTCACTAATCCTGGGTGGACCAGGTCATGGTTCTGGAAGTTaGACAGATCAATGTATTGTA +
Preference number: 5 (lower is better)
Translates to: REANPFLKTWSLILGGPGHGSGS*TDQCIV
Trigger: TACAATACATTGATCTGTCAAACTTCCAGAACCATG...ACCTGGTCCACCCAGGATTAGTGACCAGGTTTTCAGGAAAGGATTTGCTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp ATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTAAAGTGTCCTCCTTACGGTGGACCAGGTTGCTaGAAAATAGTCTGGGAAATT +
Preference number: 5 (lower is better)
Translates to: IVWEITKLHPKGLKCPPYGGPGC*KIVWEI
Trigger: AATTTCCCAGACTATTTTCAAGCAACCTGGTCCACC...GTAAGGAGGACACTTTAAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTGGAGTTAATGATTCTTaGGAGTCCATCAGTGAATAT +
Preference number: 5 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSGVNDS*ESISEY
Trigger: ATATTCACTGATGGACTCCAAAGAATCATTAACTCC...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACGGAGTTAATGATTCTTaGGAGTCCATCAGTGAATAT +
Preference number: 5 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHGVNDS*ESISEY
Trigger: ATATTCACTGATGGACTCCAAAGAATCATTAACTCC...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR CAA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTTGCTTACTGAGCCTTTaGGAAAATCAACCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: NCFCCQVLALYKPHVVRICLLSL*ENQPKV
Trigger: GACTTTTGGTTGATTTTCCAAAAGGCTCAGTAAGCA...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp ACTACTTCAAAAGGTCCTGAAAGACAAATAGTTTACCAGCTTTCTTGCCATATATCTGGCTGCTGCGCATaGCTTACTGAGCCTTTTGGA +
Preference number: 5 (lower is better)
Translates to: TTSKGPERQIVYQLSCHISGCCA*LTEPFG
Trigger: TCCAAAAGGCTCAGTAAGCAATGCGCAGCAGCCAGA...TATATGGCAAGAAAGCTGGTAAACTATTTGTCTTTCAGGACCTTTTGAAGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp TCTATACCAGTTAGGACTGTTAATTTGCACAACCTATATAATTCTCCACTGAAGTCTGGCTGCTGCGCATaGCTTACTGAGCCTTTTGGA +
Preference number: 5 (lower is better)
Translates to: SIPVRTVNLHNLYNSPLKSGCCA*LTEPFG
Trigger: TCCAAAAGGCTCAGTAAGCAATGCGCAGCAGCCAGA...CTTCAGTGGAGAATTATATAGGTTGTGCAAATTAACAGTCCTAACTGGTATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp ACTACTTCAAAAGGTCCTGAAAGACAAATAGTTTACCAGCTTTCTTGCCATATAGAGAGTGAAACTGCTTaGGACAGATCTGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: TTSKGPERQIVYQLSCHIESETA*DRSGCC
Trigger: GCAGCAGCCAGATCTGTCCAAAGCAGTTTCACTCTC...TATATGGCAAGAAAGCTGGTAAACTATTTGTCTTTCAGGACCTTTTGAAGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp GCACAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATCATCAGAGTGAGTTTTaGGAAACTCCTTCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: AQLLFPFNEKPPIVVDEHHQSEF*ETPSLW
Trigger: CCACAGAGAAGGAGTTTCCAAAAACTCACTCTGATG...ATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp GGCATTTGGATATATATACCCCAAAAGTGTTATGTCCTAAGTGCCTCAGTTCTGCATCAGAGTGAGTTTTaGGAAACTCCTTCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: GIWIYIPQKCYVLSASVLHQSEF*ETPSLW
Trigger: CCACAGAGAAGGAGTTTCCAAAAACTCACTCTGATG...CAGAACTGAGGCACTTAGGACATAACACTTTTGGGGTATATATATCCAAATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACAATGTCAAAGGTGCTTaGGTCTGTGGTATACAATTT +
Preference number: 5 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHNVKGA*VCGIQF
Trigger: AAATTGTATACCACAGACCAAAGCACCTTTGACATT...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR CAA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTAATGTCAAAGGTGCTTaGGTCTGTGGTATACAATTT +
Preference number: 5 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSNVKGA*VCGIQF
Trigger: AAATTGTATACCACAGACCAAAGCACCTTTGACATT...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp TTTCCTTCATGGCATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATAATGTCAAAGGTGCTTaGGTCTGTGGTATACAATTT +
Preference number: 5 (lower is better)
Translates to: FPSWHAQSSSHANYPALHNVKGA*VCGIQF
Trigger: AAATTGTATACCACAGACCAAAGCACCTTTGACATT...ATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATGCCATGAAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTACGTTGCAGGAACTATaGTTTTGTTACCAGGATTTT +
Preference number: 5 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSTLQEL*FCYQDF
Trigger: AAAATCCTGGTAACAAAACAATAGTTCCTGCAACGT...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR CAA 90 bp CAAACTATTGCCAAACTTCTGAAGCTTCTGTTGTCATTCAACTGCTGGGGGAGGACGTTGCAGGAACTATaGTTTTGTTACCAGGATTTT +
Preference number: 5 (lower is better)
Translates to: QTIAKLLKLLLSFNCWGRTLQEL*FCYQDF
Trigger: AAAATCCTGGTAACAAAACAATAGTTCCTGCAACGT...CCTCCCCCAGCAGTTGAATGACAACAGAAGCTTCAGAAGTTTGGCAATAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp TCTATACCAGTTAGGACTGTTAATTTGCACAACCTATATAATTCTCCACTGAAGCGCCCTCCTAACATGTaGAGCGTAGTCATGATCCTC +
Preference number: 5 (lower is better)
Translates to: SIPVRTVNLHNLYNSPLKRPPNM*SVVMIL
Trigger: GAGGATCATGACTACGCTCAACATGTTAGGAGGGCG...CTTCAGTGGAGAATTATATAGGTTGTGCAAATTAACAGTCCTAACTGGTATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTCAAAACACAGCAGGTTaGCACTTGATTGTCTATATG +
Preference number: 5 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIQNTAG*HLIVYM
Trigger: CATATAGACAATCAAGTGCAAACCTGCTGTGTTTTG...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp CTAACATTTACTGCCAATTCGGTACAAATGTGTGGTTTGGTAATACCAGAACAGGAGTTTCCTTCCCTCTaGACAATGGCTTTTCCTAGC +
Preference number: 5 (lower is better)
Translates to: LTFTANSVQMCGLVIPEQEFPSL*TMAFPS
Trigger: GCTAGGAAAAGCCATTGTCAAGAGGGAAGGAAACTC...CTGTTCTGGTATTACCAAACCACACATTTGTACCGAATTGGCAGTAAATGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp GGATTTGTTGTGAGTAACCAACTCTCACTGAAGTTACTACAAACTTCAACAGTTACTCAACTGCTTCTGTaGCCAAGTCTTGGCCCTCTA +
Preference number: 5 (lower is better)
Translates to: GFVVSNQLSLKLLQTSTVTQLLL*PSLGPL
Trigger: TAGAGGGCCAAGACTTGGCAACAGAAGCAGTTGAGT...AACTGTTGAAGTTTGTAGTAACTTCAGTGAGAGTTGGTTACTCACAACAAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CAA 90 bp ACTCTCCCATCACTGAAAAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTATGTTTAGAGTTTATTaGGGAAAGCTACGAACTAGC +
Preference number: 5 (lower is better)
Translates to: TLPSLKSDDDSTASVAKSMFRVY*GKLRTS
Trigger: GCTAGTTCGTAGCTTTCCCAAATAAACTCTAAACAT...AGACTTGGCAACAGAAGCAGTTGAGTCGTCATCACTTTTCAGTGATGGGAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACATGTTTAGAGTTTATTaGGGAAAGCTACGAACTAGC +
Preference number: 5 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHMFRVY*GKLRTS
Trigger: GCTAGTTCGTAGCTTTCCCAAATAAACTCTAAACAT...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR CAA 90 bp GGTCTTCTGATAGCTAAGTGCCATCAGGTTAGAAGCACCAACCCATTTTCACACTGCACTATTTACATATaGCTGGTACCTCTATGCAAA +
Preference number: 5 (lower is better)
Translates to: GLLIAKCHQVRSTNPFSHCTIYI*LVPLCK
Trigger: TTTGCATAGAGGTACCAGCAATATGTAAATAGTGCA...GTGTGAAAATGGGTTGGTGCTTCTAACCTGATGGCACTTAGCTATCAGAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp GCACAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATGTGCCTCAGTTCTGCTaGTATAGTATCCCACAGAAT +
Preference number: 5 (lower is better)
Translates to: AQLLFPFNEKPPIVVDEHVPQFC*YSIPQN
Trigger: ATTCTGTGGGATACTATACAAGCAGAACTGAGGCAC...ATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp CAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATCAGGGTGGACCAGGTTGCTaGAAAATAGTCTGGGAAATT +
Preference number: 5 (lower is better)
Translates to: QLLFPFNEKPPIVVDEHQGGPGC*KIVWEI
Trigger: AATTTCCCAGACTATTTTCAAGCAACCTGGTCCACC...CTGATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp CATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATAGACACAAATCAGGAGTTAATGATTCTTaGGAGTCCATCAGTGAATAT +
Preference number: 5 (lower is better)
Translates to: HAQSSSHANYPALHRHKSGVNDS*ESISEY
Trigger: ATATTCACTGATGGACTCCAAAGAATCATTAACTCC...TGATTTGTGTCTATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp CTAACATTTACTGCCAATTCGGTACAAATGTGTGGTTTGGTAATACCAGAACAGCCATATACAGTCCCATaGAGAGTGAAACTGCTTTGG +
Preference number: 5 (lower is better)
Translates to: LTFTANSVQMCGLVIPEQPYTVP*RVKLLW
Trigger: CCAAAGCAGTTTCACTCTCAATGGGACTGTATATGG...CTGTTCTGGTATTACCAAACCACACATTTGTACCGAATTGGCAGTAAATGTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp ACAGTGAAGAAATTCACAGGACTTGTGTTAAACTCTATGGCACACATTAGGGATACACTGGTCGACCTATaGAGGTTTGCAATGCTTTCT +
Preference number: 5 (lower is better)
Translates to: TVKKFTGLVLNSMAHIRDTLVDL*RFAMLS
Trigger: AGAAAGCATTGCAAACCTCAATAGGTCGACCAGTGT...ATCCCTAATGTGTGCCATAGAGTTTAACACAAGTCCTGTGAATTTCTTCACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTACGTTGCAGGAACTATaGTTTTGTTACCAGGATTTT +
Preference number: 5 (lower is better)
Translates to: NCFCCQVLALYKPHVVRITLQEL*FCYQDF
Trigger: AAAATCCTGGTAACAAAACAATAGTTCCTGCAACGT...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
CDS-3UTR CAA 90 bp ACCAGGTTGCTTGAAAATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTCAAAACACAGCAGGTTaGCACTTGATTGTCTATATG +
Preference number: 5 (lower is better)
Translates to: TRLLENSLGNYETPPKGFQNTAG*HLIVYM
Trigger: CATATAGACAATCAAGTGCAAACCTGCTGTGTTTTG...AAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTATTTTCAAGCAACCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp GCACAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATCAAGAGTTTTGTCAGTaGATAAAACCGCTGCCAGTT +
Preference number: 5 (lower is better)
Translates to: AQLLFPFNEKPPIVVDEHQEFCQ*IKPLPV
Trigger: AACTGGCAGCGGTTTTATCAACTGACAAAACTCTTG...ATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTATGTTTAGAGTTTATTaGGGAAAGCTACGAACTAGC +
Preference number: 5 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIMFRVY*GKLRTS
Trigger: GCTAGTTCGTAGCTTTCCCAAATAAACTCTAAACAT...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000504572.5
ENST00000652686.1
CDS-3UTR CAA 90 bp CATGCCCAGAGCTCATCCCATGCTAATTATCCAGCACTTCATAGACACAAATCAGGAATTAGTGTATTATaGGCAACCTATGAGATTCTG +
Preference number: 5 (lower is better)
Translates to: HAQSSSHANYPALHRHKSGISVL*ATYEIL
Trigger: CAGAATCTCATAGGTTGCCAATAATACACTAATTCC...TGATTTGTGTCTATGAAGTGCTGGATAATTAGCATGGGATGAGCTCTGGGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CAA 90 bp AACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTGGAATTAGTGTATTATaGGCAACCTATGAGATTCTG +
Preference number: 5 (lower is better)
Translates to: NCFCCQVLALYKPHVVRIGISVL*ATYEIL
Trigger: CAGAATCTCATAGGTTGCCAATAATACACTAATTCC...AATACGCACTACATGTGGTTTATAGAGGGCCAAGACTTGGCAACAGAAGCAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp CAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATCAGTGCTTACTGAGCCTTTaGGAAAATCAACCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: QLLFPFNEKPPIVVDEHQCLLSL*ENQPKV
Trigger: GACTTTTGGTTGATTTTCCAAAAGGCTCAGTAAGCA...CTGATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp ACTACTTCAAAAGGTCCTGAAAGACAAATAGTTTACCAGCTTTCTTGCCATATAAACCTGGTATTGCCTTaGCCCATTTCACTGCTGCAA +
Preference number: 5 (lower is better)
Translates to: TTSKGPERQIVYQLSCHINLVLP*PISLLQ
Trigger: TTGCAGCAGTGAAATGGGCAAAGGCAATACCAGGTT...TATATGGCAAGAAAGCTGGTAAACTATTTGTCTTTCAGGACCTTTTGAAGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp ACTACTTCAAAAGGTCCTGAAAGACAAATAGTTTACCAGCTTTCTTGCCATATACCTAGAGCAAACTGTTaGGTTTCTGAGACCATCGCT +
Preference number: 5 (lower is better)
Translates to: TTSKGPERQIVYQLSCHIPRANC*VSETIA
Trigger: AGCGATGGTCTCAGAAACCAAACAGTTTGCTCTAGG...TATATGGCAAGAAAGCTGGTAAACTATTTGTCTTTCAGGACCTTTTGAAGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp TCTATACCAGTTAGGACTGTTAATTTGCACAACCTATATAATTCTCCACTGAAGCCTAGAGCAAACTGTTaGGTTTCTGAGACCATCGCT +
Preference number: 5 (lower is better)
Translates to: SIPVRTVNLHNLYNSPLKPRANC*VSETIA
Trigger: AGCGATGGTCTCAGAAACCAAACAGTTTGCTCTAGG...CTTCAGTGGAGAATTATATAGGTTGTGCAAATTAACAGTCCTAACTGGTATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp GGCATTTGGATATATATACCCCAAAAGTGTTATGTCCTAAGTGCCTCAGTTCTGATTGAGTTCTATTTTTaGAGCGCCAAGATTGTTGGG +
Preference number: 5 (lower is better)
Translates to: GIWIYIPQKCYVLSASVLIEFYF*SAKIVG
Trigger: CCCAACAATCTTGGCGCTCAAAAAATAGAACTCAAT...CAGAACTGAGGCACTTAGGACATAACACTTTTGGGGTATATATATCCAAATGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp GGATTTGTTGTGAGTAACCAACTCTCACTGAAGTTACTACAAACTTCAACAGTTATGTTAGTTTTCCTTTaGGGGTGGCCAAGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: GFVVSNQLSLKLLQTSTVMLVFL*GWPRFP
Trigger: AGGAAACCTTGGCCACCCCAAAAGGAAAACTAACAT...AACTGTTGAAGTTTGTAGTAACTTCAGTGAGAGTTGGTTACTCACAACAAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp ATAGTCTGGGAAATTACGAAACTCCACCCAAAGGGTTTAAAGTGTCCTCCTTACCATGGTTCTGGAAGTTaGACAGATCAATGTATTGTA +
Preference number: 5 (lower is better)
Translates to: IVWEITKLHPKGLKCPPYHGSGS*TDQCIV
Trigger: TACAATACATTGATCTGTCAAACTTCCAGAACCATG...GTAAGGAGGACACTTTAAACCCTTTGGGTGGAGTTTCGTAATTTCCCAGACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp CAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATCAGGGAGTTAATGATTCTTaGGAGTCCATCAGTGAATAT +
Preference number: 5 (lower is better)
Translates to: QLLFPFNEKPPIVVDEHQGVNDS*ESISEY
Trigger: ATATTCACTGATGGACTCCAAAGAATCATTAACTCC...CTGATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp TCTATACCAGTTAGGACTGTTAATTTGCACAACCTATATAATTCTCCACTGAAGCCATATACAGTCCCATaGAGAGTGAAACTGCTTTGG +
Preference number: 5 (lower is better)
Translates to: SIPVRTVNLHNLYNSPLKPYTVP*RVKLLW
Trigger: CCAAAGCAGTTTCACTCTCAATGGGACTGTATATGG...CTTCAGTGGAGAATTATATAGGTTGTGCAAATTAACAGTCCTAACTGGTATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp CAGCTTCTTTTCCCATTTAATGAAAAGCCTCCTATAGTTGTCGATGAGCATCAGAATGTCAAAGGTGCTTaGGTCTGTGGTATACAATTT +
Preference number: 5 (lower is better)
Translates to: QLLFPFNEKPPIVVDEHQNVKGA*VCGIQF
Trigger: AAATTGTATACCACAGACCAAAGCACCTTTGACATT...CTGATGCTCATCGACAACTATAGGAGGCTTTTCATTAAATGGGAAAAGAAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp GGCATTTGGATATATATACCCCAAAAGTGTTATGTCCTAAGTGCCTCAGTTCTGACGTTGCAGGAACTATaGTTTTGTTACCAGGATTTT +
Preference number: 5 (lower is better)
Translates to: GIWIYIPQKCYVLSASVLTLQEL*FCYQDF
Trigger: AAAATCCTGGTAACAAAACAATAGTTCCTGCAACGT...CAGAACTGAGGCACTTAGGACATAACACTTTTGGGGTATATATATCCAAATGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp CTAACATTTACTGCCAATTCGGTACAAATGTGTGGTTTGGTAATACCAGAACAGCTAAGGTCCAGTGATTaGGTATCAGAAGATCTAAGT +
Preference number: 5 (lower is better)
Translates to: LTFTANSVQMCGLVIPEQLRSSD*VSEDLS
Trigger: ACTTAGATCTTCTGATACCAAATCACTGGACCTTAG...CTGTTCTGGTATTACCAAACCACACATTTGTACCGAATTGGCAGTAAATGTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS-3UTR CAA 90 bp ACTACTTCAAAAGGTCCTGAAAGACAAATAGTTTACCAGCTTTCTTGCCATATAGTGCCTCAGTTCTGCTaGTATAGTATCCCACAGAAT +
Preference number: 5 (lower is better)
Translates to: TTSKGPERQIVYQLSCHIVPQFC*YSIPQN
Trigger: ATTCTGTGGGATACTATACAAGCAGAACTGAGGCAC...TATATGGCAAGAAAGCTGGTAAACTATTTGTCTTTCAGGACCTTTTGAAGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CAA 90 bp TCTATACCAGTTAGGACTGTTAATTTGCACAACCTATATAATTCTCCACTGAAGGGTGGACCAGGTTGCTaGAAAATAGTCTGGGAAATT +
Preference number: 5 (lower is better)
Translates to: SIPVRTVNLHNLYNSPLKGGPGC*KIVWEI
Trigger: AATTTCCCAGACTATTTTCAAGCAACCTGGTCCACC...CTTCAGTGGAGAATTATATAGGTTGTGCAAATTAACAGTCCTAACTGGTATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS-3UTR CAA 90 bp ACAGTGAAGAAATTCACAGGACTTGTGTTAAACTCTATGGCACACATTAGGGATAATGTCAAAGGTGCTTaGGTCTGTGGTATACAATTT +
Preference number: 5 (lower is better)
Translates to: TVKKFTGLVLNSMAHIRDNVKGA*VCGIQF
Trigger: AAATTGTATACCACAGACCAAAGCACCTTTGACATT...ATCCCTAATGTGTGCCATAGAGTTTAACACAAGTCCTGTGAATTTCTTCACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp CTAACATTTACTGCCAATTCGGTACAAATGTGTGGTTTGGTAATACCAGAACAGACGTTGCAGGAACTATaGTTTTGTTACCAGGATTTT +
Preference number: 5 (lower is better)
Translates to: LTFTANSVQMCGLVIPEQTLQEL*FCYQDF
Trigger: AAAATCCTGGTAACAAAACAATAGTTCCTGCAACGT...CTGTTCTGGTATTACCAAACCACACATTTGTACCGAATTGGCAGTAAATGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000415690.6
CDS-3UTR CAA 90 bp ACTACTTCAAAAGGTCCTGAAAGACAAATAGTTTACCAGCTTTCTTGCCATATACAAAACACAGCAGGTTaGCACTTGATTGTCTATATG +
Preference number: 5 (lower is better)
Translates to: TTSKGPERQIVYQLSCHIQNTAG*HLIVYM
Trigger: CATATAGACAATCAAGTGCAAACCTGCTGTGTTTTG...TATATGGCAAGAAAGCTGGTAAACTATTTGTCTTTCAGGACCTTTTGAAGTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343796.6
ENST00000394464.7
ENST00000424646.6
CDS-3UTR CAA 90 bp GGATTTGTTGTGAGTAACCAACTCTCACTGAAGTTACTACAAACTTCAACAGTTTGCACTATTTACATATaGCTGGTACCTCTATGCAAA +
Preference number: 5 (lower is better)
Translates to: GFVVSNQLSLKLLQTSTVCTIYI*LVPLCK
Trigger: TTTGCATAGAGGTACCAGCAATATGTAAATAGTGCA...AACTGTTGAAGTTTGTAGTAACTTCAGTGAGAGTTGGTTACTCACAACAAATCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343796.6
ENST00000394464.7
CDS GCA 72 bp AGGTTCCGGGCGCGCGTGCCCCGTCCCGGTCCCAGCTaGTTCGGCCGCTCCGGCTGCGGCGTCTCCTTCCAC +
Preference number: 6 (lower is better)
Translates to: RFRARVPRPGPS*FGRSGCGVSFH
Trigger: GTGGAAGGAGACGCCGCAGCCGGAGCGGCCGAAGCAGCTGGGACCGGGACGGGGCACGCGCGCCCGGAACCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231509.7
ENST00000394464.7
CDS GCA 72 bp CCCCGTCCCGGTCCCAGCTGCTTCGGCCGCTCCGGCTaGGGCGTCTCCTTCCACCCACAGAATCCGTCCCCG +
Preference number: 6 (lower is better)
Translates to: PRPGPSCFGRSG*GVSFHPQNPSP
Trigger: CGGGGACGGATTCTGTGGGTGGAAGGAGACGCCGCAGCCGGAGCGGCCGAAGCAGCTGGGACCGGGACGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231509.7
ENST00000394464.7
CDS GCA 72 bp GCTGCCGCCGCCGCGCTCTCGCACTGGGAGAGAAGTTaGAAAGCAGAACCCACCCTCCCCCGCGCCCCGACC +
Preference number: 6 (lower is better)
Translates to: AAAAALSHWERS*KAEPTLPRAPT
Trigger: GGTCGGGGCGCGGGGGAGGGTGGGTTCTGCTTTGCAACTTCTCTCCCAGTGCGAGAGCGCGGCGGCGGCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503201.1
CDS TCA 72 bp TTCCACCCACAGAATCCGTCCCCGACGGGCAGGCGGTaGCTCGGGCTCCCGTCACAGACACGAGCTCGCAAA +
Preference number: 6 (lower is better)
Translates to: FHPQNPSPTGRR*LGLPSQTRARK
Trigger: TTTGCGAGCTCGTGTCTGTGACGGGAGCCCGAGTCACCGCCTGCCCGTCGGGGACGGATTCTGTGGGTGGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231509.7
ENST00000394464.7
CDS GCA 72 bp ATCAGTGAATATCAACTGTTGGTGACGCTTGGCAACTaGAGGGGCGCCCGCGGTCCCTGCCCCCACGCCCTC +
Preference number: 6 (lower is better)
Translates to: ISEYQLLVTLGN*RGARGPCPHAL
Trigger: GAGGGCGTGGGGGCAGGGACCGCGGGCGCCCCTGCAGTTGCCAAGCGTCACCAACAGTTGATATTCACTGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508760.5
CDS TCA 72 bp CAACTGGTGGGAGCAGAATCGTGTGAAGTGCAGAAGTaGCCATGGTTCCAGTGTTCAGCGCACCCTGGGCAT +
Preference number: 6 (lower is better)
Translates to: QLVGAESCEVQK*PWFQCSAHPGH
Trigger: ATGCCCAGGGTGCGCTGAACACTGGAACCATGGTCACTTCTGCACTTCACACGATTCTGCTCCCACCAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503701.1
ENST00000505058.5
CDS CCA 72 bp GAAACTCCTTCTCTGTGGGGGCAGCAGACACAGCAGTaGATGCTGAACTCTTGGGGTTCTCTGGAACACTGG +
Preference number: 6 (lower is better)
Translates to: ETPSLWGQQTQQ*MLNSWGSLEHW
Trigger: CCAGTGTTCCAGAGAACCCCAAGAGTTCAGCATCCACTGCTGTGTCTGCTGCCCCCACAGAGAAGGAGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000503201.1
ENST00000504572.5
ENST00000652686.1
CDS CCA 72 bp ATCCTGAAGCTTCATCAGAGCACACCAGGCAGAGTTTaGGAGGTGGTCCTGTTGTTGCTGTTGAGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: ILKLHQSTPGRV*EVVLLLLLRSW
Trigger: CCAGCTCCTCAACAGCAACAACAGGACCACCTCCCAAACTCTGCCTGGTGTGCTCTGATGAAGCTTCAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000503201.1
ENST00000504336.1
ENST00000504572.5
ENST00000652686.1
CDS CCA 72 bp GCAGAAGTGACCATGGTTCCAGTGTTCAGCGCACCCTaGGCATCAATCCATTGTTTTCCAGGGAGACTGGAG +
Preference number: 6 (lower is better)
Translates to: AEVTMVPVFSAP*ASIHCFPGRLE
Trigger: CTCCAGTCTCCCTGGAAAACAATGGATTGATGCCCAGGGTGCGCTGAACACTGGAACCATGGTCACTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503701.1
ENST00000505058.5
CDS CCA 72 bp AGCTTTAAGTCTGTTTCCCCCGAGGAAAGGCTGATTTaGCCCTGCTGTGGGAATCCCAGGTCATTTCCCATC +
Preference number: 6 (lower is better)
Translates to: SFKSVSPEERLI*PCCGNPRSFPI
Trigger: GATGGGAAATGACCTGGGATTCCCACAGCAGGGCCAAATCAGCCTTTCCTCGGGGGAAACAGACTTAAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000502500.1
ENST00000502892.5
ENST00000503201.1
ENST00000504572.5
ENST00000508760.5
ENST00000510170.5
ENST00000514699.1
ENST00000652686.1
CDS CAA 72 bp GTACAACTAAAGCCCGAGGAGGGTAGGAGCTGCATTTaGTTCCTCCCCATTCTCGCACAGAGAAGGCACTCA +
Preference number: 6 (lower is better)
Translates to: VQLKPEEGRSCI*FLPILAQRRHS
Trigger: TGAGTGCCTTCTCTGTGCGAGAATGGGGAGGAACAAAATGCAGCTCCTACCCTCCTCGGGCTTTAGTTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343796.6
ENST00000503701.1
ENST00000504572.5
ENST00000505058.5
CDS CAA 72 bp GGTTCCAGTGTTCAGCGCACCCTGGGCATCAATCCATaGTTTTCCAGGGAGACTGGAGAACTGGATCAGTTG +
Preference number: 6 (lower is better)
Translates to: GSSVQRTLGINP*FSRETGELDQL
Trigger: CAACTGATCCAGTTCTCCAGTCTCCCTGGAAAACAATGGATTGATGCCCAGGGTGCGCTGAACACTGGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503701.1
ENST00000505058.5
CDS TCA 72 bp CCAAAAGCTTTAAGTCTGTTTCCCCCGAGGAAAGGCTaGTTTGGCCCTGCTGTGGGAATCCCAGGTCATTTC +
Preference number: 6 (lower is better)
Translates to: PKALSLFPPRKG*FGPAVGIPGHF
Trigger: GAAATGACCTGGGATTCCCACAGCAGGGCCAAATCAGCCTTTCCTCGGGGGAAACAGACTTAAAGCTTTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000502500.1
ENST00000502892.5
ENST00000503201.1
ENST00000504572.5
ENST00000508760.5
ENST00000510170.5
ENST00000514699.1
ENST00000652686.1
CDS GCA 72 bp AAGTCTGTTTCCCCCGAGGAAAGGCTGATTTGGCCCTaGTGTGGGAATCCCAGGTCATTTCCCATCACTTTT +
Preference number: 6 (lower is better)
Translates to: KSVSPEERLIWP*CGNPRSFPITF
Trigger: AAAAGTGATGGGAAATGACCTGGGATTCCCACAGCAGGGCCAAATCAGCCTTTCCTCGGGGGAAACAGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000502500.1
ENST00000502892.5
ENST00000503201.1
ENST00000504572.5
ENST00000508760.5
ENST00000510170.5
ENST00000514699.1
ENST00000652686.1
CDS CCA 72 bp TGTTTCCCCCGAGGAAAGGCTGATTTGGCCCTGCTGTaGGAATCCCAGGTCATTTCCCATCACTTTTGTTTC +
Preference number: 6 (lower is better)
Translates to: CFPRGKADLALL*ESQVISHHFCF
Trigger: GAAACAAAAGTGATGGGAAATGACCTGGGATTCCCACAGCAGGGCCAAATCAGCCTTTCCTCGGGGGAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000502500.1
ENST00000502892.5
ENST00000503201.1
ENST00000504572.5
ENST00000508760.5
ENST00000510170.5
ENST00000514699.1
ENST00000652686.1
CDS GCA 72 bp GGTATTGCCTTTGCCCATTTCACTGCTGCAATCACTTaGCGCCCTCCTAACATGTTGAGCGTAGTCATGATC +
Preference number: 6 (lower is better)
Translates to: GIAFAHFTAAIT*RPPNMLSVVMI
Trigger: GATCATGACTACGCTCAACATGTTAGGAGGGCGGCAAGTGATTGCAGCAGTGAAATGGGCAAAGGCAATACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000503201.1
ENST00000504572.5
ENST00000652686.1
CDS GCA 72 bp AGTCGTCACAGAAGCTGGCCCCTTTCCTGGGCTAACTaGTCTGAGAGCACCAGAATGAAATCTGACTTAGAT +
Preference number: 6 (lower is better)
Translates to: SRHRSWPLSWAN*SESTRMKSDLD
Trigger: ATCTAAGTCAGATTTCATTCTGGTGCTCTCAGAGCAGTTAGCCCAGGAAAGGGGCCAGCTTCTGTGACGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS GCA 72 bp ATTAAGGTACAACTAAAGCCCGAGGAGGGTAGGAGCTaGATTTTGTTCCTCCCCATTCTCGCACAGAGAAGG +
Preference number: 6 (lower is better)
Translates to: IKVQLKPEEGRS*ILFLPILAQRR
Trigger: CCTTCTCTGTGCGAGAATGGGGAGGAACAAAATGCAGCTCCTACCCTCCTCGGGCTTTAGTTGTACCTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343796.6
ENST00000503701.1
ENST00000504572.5
ENST00000505058.5
CDS CAA 90 bp AGCACACTGCTGGGGTTTTCTTCTCTACCAGGAGTTAATGATTCTTaGGAGTCCATCAGTGAATATCAACTCTGGCAGAGGAGCCGCTCG +
Preference number: 6 (lower is better)
Translates to: STLLGFSSLPGVNDS*ESISEYQLWQRSRS
Trigger: CGAGCGGCTCCTCTGCCAGAGTTGATATTCACTGATGGACTCCAAAGAATCATTAACTCCTGGTAGAGAAGAAAACCCCAGCAGTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231509.7
ENST00000394464.7
ENST00000415690.6
CDS TCA 72 bp AAATCAACCAAAAGTCTTCGCTGCTTGGAGTCTGATTaGGAAGCGACAGCCAGTGAGGGTGAAGACGCAGAA +
Preference number: 6 (lower is better)
Translates to: KSTKSLRCLESD*EATASEGEDAE
Trigger: TTCTGCGTCTTCACCCTCACTGGCTGTCGCTTCTCAATCAGACTCCAAGCAGCGAAGACTTTTGGTTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000502500.1
ENST00000502892.5
ENST00000503201.1
ENST00000504572.5
ENST00000508760.5
ENST00000510170.5
ENST00000514699.1
ENST00000652686.1
CDS GCA 72 bp GGTCTGTGGTATACAATTTCACATTGCCACCGTTGGTaGCAGTCTGGCCCTTCAAATGTTGCTGTTCTGAAG +
Preference number: 6 (lower is better)
Translates to: GLWYTISHCHRW*QSGPSNVAVLK
Trigger: CTTCAGAACAGCAACATTTGAAGGGCCAGACTGGCACCAACGGTGGCAATGTGAAATTGTATACCACAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000503201.1
ENST00000504572.5
ENST00000652686.1
CDS CAA 72 bp TCTCCCATATACAGTCCCATTGAGAGTGAAACTGCTTaGGACAGATCTGGCTGCTGCGCATTGCTTACTGAG +
Preference number: 6 (lower is better)
Translates to: SPIYSPIESETA*DRSGCCALLTE
Trigger: CTCAGTAAGCAATGCGCAGCAGCCAGATCTGTCCAAAGCAGTTTCACTCTCAATGGGACTGTATATGGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000502500.1
ENST00000502892.5
ENST00000503201.1
ENST00000504572.5
ENST00000508760.5
ENST00000510170.5
ENST00000514699.1
ENST00000652686.1
CDS CAA 90 bp CTGCTTTGGACAGATCTGGCTGCTGCGCATTGCTTACTGAGCCTTTaGGAAAATCAACCAAAAGTCTTCGCTGCTTGGAGTCTGATTGAG +
Preference number: 6 (lower is better)
Translates to: LLWTDLAAAHCLLSL*ENQPKVFAAWSLIE
Trigger: CTCAATCAGACTCCAAGCAGCGAAGACTTTTGGTTGATTTTCCAAAAGGCTCAGTAAGCAATGCGCAGCAGCCAGATCTGTCCAAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000502500.1
ENST00000502892.5
ENST00000503201.1
ENST00000504572.5
ENST00000508760.5
ENST00000510170.5
ENST00000514699.1
ENST00000652686.1
CDS CAA 90 bp GTTTCTGTCTCTCCCATATACAGTCCCATTGAGAGTGAAACTGCTTaGGACAGATCTGGCTGCTGCGCATTGCTTACTGAGCCTTTTGGA +
Preference number: 6 (lower is better)
Translates to: VSVSPIYSPIESETA*DRSGCCALLTEPFG
Trigger: TCCAAAAGGCTCAGTAAGCAATGCGCAGCAGCCAGATCTGTCCAAAGCAGTTTCACTCTCAATGGGACTGTATATGGGAGAGACAGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000502500.1
ENST00000502892.5
ENST00000503201.1
ENST00000504572.5
ENST00000508760.5
ENST00000510170.5
ENST00000514699.1
ENST00000652686.1
CDS CAA 90 bp GTTATTAAGGTACAACTAAAGCCCGAGGAGGGTAGGAGCTGCATTTaGTTCCTCCCCATTCTCGCACAGAGAAGGCACTCATTAAGTGCT +
Preference number: 6 (lower is better)
Translates to: VIKVQLKPEEGRSCI*FLPILAQRRHSLSA
Trigger: AGCACTTAATGAGTGCCTTCTCTGTGCGAGAATGGGGAGGAACAAAATGCAGCTCCTACCCTCCTCGGGCTTTAGTTGTACCTTAATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343796.6
ENST00000503701.1
ENST00000504572.5
ENST00000505058.5
CDS TCA 72 bp GTTGGACACATGCGCATTTTACGGTCCTGCAGGGCTTaGAAGATTTCTGACCTTCTAAGGTCCAGTGATTTG +
Preference number: 6 (lower is better)
Translates to: VGHMRILRSCRA*KISDLLRSSDL
Trigger: CAAATCACTGGACCTTAGAAGGTCAGAAATCTTTCAAGCCCTGCAGGACCGTAAAATGCGCATGTGTCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS GCA 72 bp CAAAGGTGCTTTGGTCTGTGGTATACAATTTCACATTaGCACCGTTGGTGCCAGTCTGGCCCTTCAAATGTT +
Preference number: 6 (lower is better)
Translates to: QRCFGLWYTISH*HRWCQSGPSNV
Trigger: AACATTTGAAGGGCCAGACTGGCACCAACGGTGGCAATGTGAAATTGTATACCACAGACCAAAGCACCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000503201.1
ENST00000504572.5
ENST00000652686.1
CDS CCA 72 bp TTTGGTCTGTGGTATACAATTTCACATTGCCACCGTTaGTGCCAGTCTGGCCCTTCAAATGTTGCTGTTCTG +
Preference number: 6 (lower is better)
Translates to: FGLWYTISHCHR*CQSGPSNVAVL
Trigger: CAGAACAGCAACATTTGAAGGGCCAGACTGGCACCAACGGTGGCAATGTGAAATTGTATACCACAGACCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000503201.1
ENST00000504572.5
ENST00000652686.1
CDS CAA 72 bp ACAGATCTGGCTGCTGCGCATTGCTTACTGAGCCTTTaGGAAAATCAACCAAAAGTCTTCGCTGCTTGGAGT +
Preference number: 6 (lower is better)
Translates to: TDLAAAHCLLSL*ENQPKVFAAWS
Trigger: ACTCCAAGCAGCGAAGACTTTTGGTTGATTTTCCAAAAGGCTCAGTAAGCAATGCGCAGCAGCCAGATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000502500.1
ENST00000502892.5
ENST00000503201.1
ENST00000504572.5
ENST00000508760.5
ENST00000510170.5
ENST00000514699.1
ENST00000652686.1
CDS CAA 72 bp CTTTGGTCTGTGGTATACAATTTCACATTGCCACCGTaGGTGCCAGTCTGGCCCTTCAAATGTTGCTGTTCT +
Preference number: 6 (lower is better)
Translates to: LWSVVYNFTLPP*VPVWPFKCCCS
Trigger: AGAACAGCAACATTTGAAGGGCCAGACTGGCACCAACGGTGGCAATGTGAAATTGTATACCACAGACCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000503201.1
ENST00000504572.5
ENST00000652686.1
CDS CAA 72 bp TCAAAGGTGCTTTGGTCTGTGGTATACAATTTCACATaGCCACCGTTGGTGCCAGTCTGGCCCTTCAAATGT +
Preference number: 6 (lower is better)
Translates to: SKVLWSVVYNFT*PPLVPVWPFKC
Trigger: ACATTTGAAGGGCCAGACTGGCACCAACGGTGGCAATGTGAAATTGTATACCACAGACCAAAGCACCTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000503201.1
ENST00000504572.5
ENST00000652686.1
CDS CAA 90 bp GTGGATGCTGAACTCTTGGGGTTCTCTGGAACACTGGTCGACCTATaGAGGTTTGCAATGCTTTCTTCCAAAAGCTTTAAGTCTGTTTCC +
Preference number: 6 (lower is better)
Translates to: VDAELLGFSGTLVDL*RFAMLSSKSFKSVS
Trigger: GGAAACAGACTTAAAGCTTTTGGAAGAAAGCATTGCAAACCTCAATAGGTCGACCAGTGTTCCAGAGAACCCCAAGAGTTCAGCATCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000502892.5
ENST00000503201.1
ENST00000504572.5
ENST00000508760.5
ENST00000510170.5
ENST00000514699.1
ENST00000652686.1
CDS CAA 90 bp TCAAAGGTGCTTTGGTCTGTGGTATACAATTTCACATTGCCACCGTaGGTGCCAGTCTGGCCCTTCAAATGTTGCTGTTCTGAAGATACA +
Preference number: 6 (lower is better)
Translates to: SKVLWSVVYNFTLPP*VPVWPFKCCCSEDT
Trigger: TGTATCTTCAGAACAGCAACATTTGAAGGGCCAGACTGGCACCAACGGTGGCAATGTGAAATTGTATACCACAGACCAAAGCACCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000503201.1
ENST00000504572.5
ENST00000652686.1
CDS CAA 90 bp TGCAAAATGTCAAAGGTGCTTTGGTCTGTGGTATACAATTTCACATaGCCACCGTTGGTGCCAGTCTGGCCCTTCAAATGTTGCTGTTCT +
Preference number: 6 (lower is better)
Translates to: CKMSKVLWSVVYNFT*PPLVPVWPFKCCCS
Trigger: AGAACAGCAACATTTGAAGGGCCAGACTGGCACCAACGGTGGCAATGTGAAATTGTATACCACAGACCAAAGCACCTTTGACATTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000503201.1
ENST00000504572.5
ENST00000652686.1
CDS CAA 90 bp AGCACACTGCTGGGGTTTTCTTCTCTACCAGGAGTTAATGATTCTTaGGAGTCCATCAGTGAATATCAAACTCGAAGGAAGTTGCACGCC +
Preference number: 6 (lower is better)
Translates to: STLLGFSSLPGVNDS*ESISEYQTRRKLHA
Trigger: GGCGTGCAACTTCCTTCGAGTTTGATATTCACTGATGGACTCCAAAGAATCATTAACTCCTGGTAGAGAAGAAAACCCCAGCAGTGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502892.5
CDS CAA 90 bp AGCACACTGCTGGGGTTTTCTTCTCTACCAGGAGTTAATGATTCTTaGGAGTCCATCAGTGAATATCAACTGTTGGTGACGCTTGGCAAC +
Preference number: 6 (lower is better)
Translates to: STLLGFSSLPGVNDS*ESISEYQLLVTLGN
Trigger: GTTGCCAAGCGTCACCAACAGTTGATATTCACTGATGGACTCCAAAGAATCATTAACTCCTGGTAGAGAAGAAAACCCCAGCAGTGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508760.5
CDS TCA 72 bp CCCTTCAAATGTTGCTGTTCTGAAGATACATCAGAGTaGGTTTTTGGAAACTCCTTCTCTGTGGGGGCAGCA +
Preference number: 6 (lower is better)
Translates to: PFKCCCSEDTSE*VFGNSFSVGAA
Trigger: TGCTGCCCCCACAGAGAAGGAGTTTCCAAAAACTCACTCTGATGTATCTTCAGAACAGCAACATTTGAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000503201.1
ENST00000504572.5
ENST00000652686.1
CDS GCA 72 bp ATTGAGAGTGAAACTGCTTTGGACAGATCTGGCTGCTaGGCATTGCTTACTGAGCCTTTTGGAAAATCAACC +
Preference number: 6 (lower is better)
Translates to: IESETALDRSGC*ALLTEPFGKST
Trigger: GGTTGATTTTCCAAAAGGCTCAGTAAGCAATGCGCAGCAGCCAGATCTGTCCAAAGCAGTTTCACTCTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000502500.1
ENST00000502892.5
ENST00000503201.1
ENST00000504572.5
ENST00000508760.5
ENST00000510170.5
ENST00000514699.1
ENST00000652686.1
CDS CCA 72 bp CCAAATCCTGCAAAATGTCAAAGGTGCTTTGGTCTGTaGTATACAATTTCACATTGCCACCGTTGGTGCCAG +
Preference number: 6 (lower is better)
Translates to: PNPAKCQRCFGL*YTISHCHRWCQ
Trigger: CTGGCACCAACGGTGGCAATGTGAAATTGTATACCACAGACCAAAGCACCTTTGACATTTTGCAGGATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000503201.1
ENST00000504572.5
ENST00000652686.1
CDS CAA 72 bp AATGTTGCTGTTCTGAAGATACATCAGAGTGAGTTTTaGGAAACTCCTTCTCTGTGGGGGCAGCAGACACAG +
Preference number: 6 (lower is better)
Translates to: NVAVLKIHQSEF*ETPSLWGQQTQ
Trigger: CTGTGTCTGCTGCCCCCACAGAGAAGGAGTTTCCAAAAACTCACTCTGATGTATCTTCAGAACAGCAACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000503201.1
ENST00000504572.5
ENST00000652686.1
CDS CAA 72 bp ATAAACATGTTTGGGAAGCAAAAGCACCAGGAACTGTaGGTAGCTCAACTGGTGGGAGCAGAATCGTGTGAA +
Preference number: 6 (lower is better)
Translates to: INMFGKQKHQEL*VAQLVGAESCE
Trigger: TTCACACGATTCTGCTCCCACCAGTTGAGCTACCAACAGTTCCTGGTGCTTTTGCTTCCCAAACATGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503701.1
ENST00000505058.5
CDS TCA 72 bp GTTGGTGCCAGTCTGGCCCTTCAAATGTTGCTGTTCTaGAGATACATCAGAGTGAGTTTTTGGAAACTCCTT +
Preference number: 6 (lower is better)
Translates to: VGASLALQMLLF*RYIRVSFWKLL
Trigger: AAGGAGTTTCCAAAAACTCACTCTGATGTATCTTCAGAACAGCAACATTTGAAGGGCCAGACTGGCACCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000503201.1
ENST00000504572.5
ENST00000652686.1
CDS TCA 72 bp TATTCCCCCAGGCAGATCCTAATGGAAACCAACATGTaGGGTCTGATGCTGGGAATTTTATCATGCTCAACA +
Preference number: 6 (lower is better)
Translates to: YSPRQILMETNM*GLMLGILSCST
Trigger: TGTTGAGCATGATAAAATTCCCAGCATCAGACCTCACATGTTGGTTTCCATTAGGATCTGCCTGGGGGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS TCA 72 bp AATTATGGTGAATTTCCTAGTTCAGCTCAGAGCCACTaGTTCAGCAGATATTCCCCCAGGCAGATCCTAATG +
Preference number: 6 (lower is better)
Translates to: NYGEFPSSAQSH*FSRYSPRQILM
Trigger: CATTAGGATCTGCCTGGGGGAATATCTGCTGAATCAGTGGCTCTGAGCTGAACTAGGAAATTCACCATAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343796.6
CDS CCA 72 bp GTATACAATTTCACATTGCCACCGTTGGTGCCAGTCTaGCCCTTCAAATGTTGCTGTTCTGAAGATACATCA +
Preference number: 6 (lower is better)
Translates to: VYNFTLPPLVPV*PFKCCCSEDTS
Trigger: TGATGTATCTTCAGAACAGCAACATTTGAAGGGCCAGACTGGCACCAACGGTGGCAATGTGAAATTGTATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000503201.1
ENST00000504572.5
ENST00000652686.1
CDS CAA 72 bp GAACTCTTGGGGTTCTCTGGAACACTGGTCGACCTATaGAGGTTTGCAATGCTTTCTTCCAAAAGCTTTAAG +
Preference number: 6 (lower is better)
Translates to: ELLGFSGTLVDL*RFAMLSSKSFK
Trigger: CTTAAAGCTTTTGGAAGAAAGCATTGCAAACCTCAATAGGTCGACCAGTGTTCCAGAGAACCCCAAGAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000502500.1
ENST00000502892.5
ENST00000503201.1
ENST00000504572.5
ENST00000508760.5
ENST00000510170.5
ENST00000514699.1
ENST00000652686.1
CDS CAA 72 bp AACCACTTCATGCATAGAATCCAAGAGTTTTGTCAGTaGATAAAACCGCTGCCAGTTCTGGCTGGAGTTTCC +
Preference number: 6 (lower is better)
Translates to: NHFMHRIQEFCQ*IKPLPVLAGVS
Trigger: GGAAACTCCAGCCAGAACTGGCAGCGGTTTTATCAACTGACAAAACTCTTGGATTCTATGCATGAAGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000424646.6
ENST00000503201.1
ENST00000504572.5
ENST00000652686.1
CDS CAA 72 bp AGGGAGACTGGAGAACTGGATCAGTTGAGATCGATATaGAGTAGTGTCTGTTACACGATTCTTCCTTCTCAG +
Preference number: 6 (lower is better)
Translates to: RETGELDQLRSI*SSVCYTILPSQ
Trigger: CTGAGAAGGAAGAATCGTGTAACAGACACTACTCAATATCGATCTCAACTGATCCAGTTCTCCAGTCTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505058.5
CDS CAA 90 bp GGCATCAATCCATTGTTTTCCAGGGAGACTGGAGAACTGGATCAGTaGAGATCGATATTGAGTAGTGTCTGTTACACGATTCTTCCTTCT +
Preference number: 6 (lower is better)
Translates to: GINPLFSRETGELDQ*RSILSSVCYTILPS
Trigger: AGAAGGAAGAATCGTGTAACAGACACTACTCAATATCGATCTCAACTGATCCAGTTCTCCAGTCTCCCTGGAAAACAATGGATTGATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505058.5
CDS CAA 90 bp GGCATCAATCCATTGTTTTCCAGGGAGACTGGAGAACTGGATCAGTaGAGATCGATATTGAGTAGTGTCTGTTACACGATTCTCTCTCAT +
Preference number: 6 (lower is better)
Translates to: GINPLFSRETGELDQ*RSILSSVCYTILSH
Trigger: ATGAGAGAGAATCGTGTAACAGACACTACTCAATATCGATCTCAACTGATCCAGTTCTCCAGTCTCCCTGGAAAACAATGGATTGATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503701.1
CDS CCA 72 bp TGTAACTCAGAGGAAACATACAGCATGTGTTTACATTaGTCGTACATGCAGGGTAGAGTCATTCTCTGCTCA +
Preference number: 6 (lower is better)
Translates to: CNSEETYSMCLH*SYMQGRVILCS
Trigger: TGAGCAGAGAATGACTCTACCCTGCATGTACGACCAATGTAAACACATGCTGTATGTTTCCTCTGAGTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000231509.7
ENST00000343796.6
ENST00000394464.7
ENST00000394466.6
ENST00000415690.6
ENST00000424646.6
ENST00000503201.1
ENST00000504572.5
ENST00000652686.1
CDS CAA 72 bp CCATTGTTTTCCAGGGAGACTGGAGAACTGGATCAGTaGAGATCGATATTGAGTAGTGTCTGTTACACGATT +
Preference number: 6 (lower is better)
Translates to: PLFSRETGELDQ*RSILSSVCYTI
Trigger: AATCGTGTAACAGACACTACTCAATATCGATCTCAACTGATCCAGTTCTCCAGTCTCCCTGGAAAACAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503701.1
ENST00000505058.5
CDS CAA 72 bp AGGGAGACTGGAGAACTGGATCAGTTGAGATCGATATaGAGTAGTGTCTGTTACACGATTCTCTCTCATGTA +
Preference number: 6 (lower is better)
Translates to: RETGELDQLRSI*SSVCYTILSHV
Trigger: TACATGAGAGAGAATCGTGTAACAGACACTACTCAATATCGATCTCAACTGATCCAGTTCTCCAGTCTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503701.1
CDS CAA 90 bp AGCACACTGCTGGGGTTTTCTTCTCTACCAGGAGTTAATGATTCTTaGGAGTCCATCAGTGAATATCAACTCTCTCATGTAGATGGTTAT +
Preference number: 6 (lower is better)
Translates to: STLLGFSSLPGVNDS*ESISEYQLSHVDGY
Trigger: ATAACCATCTACATGAGAGAGTTGATATTCACTGATGGACTCCAAAGAATCATTAACTCCTGGTAGAGAAGAAAACCCCAGCAGTGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504572.5
CDS CAA 90 bp TTGTTTTCCAGGGAGACTGGAGAACTGGATCAGTTGAGATCGATATaGAGTAGTGTCTGTTACACGATTCTCTCTCATGTAGATGGTTAT +
Preference number: 6 (lower is better)
Translates to: LFSRETGELDQLRSI*SSVCYTILSHVDGY
Trigger: ATAACCATCTACATGAGAGAGAATCGTGTAACAGACACTACTCAATATCGATCTCAACTGATCCAGTTCTCCAGTCTCCCTGGAAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503701.1
CDS CCA 72 bp AGTACAGTAATAAGCAACAAATGGCATAAACATGTTTaGGAAGCAAAAGCACCAGGAACTGTTGGTAGCTCA +
Preference number: 6 (lower is better)
Translates to: STVISNKWHKHV*EAKAPGTVGSS
Trigger: TGAGCTACCAACAGTTCCTGGTGCTTTTGCTTCCCAAACATGTTTATGCCATTTGTTGCTTATTACTGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503701.1
ENST00000505058.5