RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NR2F2 (Homo sapiens)

Ensembl gene IDs: ENSG00000185551

Ensembl transcript IDs: ENST00000394166.8, ENST00000394171.6, ENST00000421109.6, ENST00000453270.2, ENST00000559679.1

Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGACAAAGGATCCCAAGAGCAGTACAGATTGTAGCCACACAATCTaGAATGTCAAAATGTCGATGTGTTTTTATGTACATAACTCCAAT +
Preference number: 1 (lower is better)
Translates to: RTKDPKSSTDCSHTI*NVKMSMCFYVHNSN
Trigger: ATTGGAGTTATGTACATAAAAACACATCGACATTTTGACATTTCAGATTGTGTGGCTACAATCTGTACTGCTCTTGGGATCCTTTGTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
3UTR-3UTR CCA 90 bp TTCACAATACCTTCCCTAAGCAGGCACTTAAGTGTGACAAATATAAGGGCCTTTTGTAAAGACAGTGAGTaGGGACAGCCAGGTTTCAGA +
Preference number: 2 (lower is better)
Translates to: FTIPSLSRHLSVTNIRAFCKDSE*GQPGFR
Trigger: TCTGAAACCTGGCTGTCCCCACTCACTGTCTTTACA...AAAGGCCCTTATATTTGTCACACTTAAGTGCCTGCTTAGGGAAGGTATTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
3UTR-3UTR GCA 90 bp ATTCAAAACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCGTCACCACTTGTAAGTaGGTTTCCATCATCTTTGAG +
Preference number: 2 (lower is better)
Translates to: IQNLSMCLGHIPWLPINSVTTCK*VSIIFE
Trigger: CTCAAAGATGATGGAAACGCACTTACAAGTGGTGAC...GGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTTTTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
3UTR-3UTR CCA 90 bp AAAGACTCCAAAAGAAATAGTTACTACTTCCAAATCAGCACACCCTGTAAAGTTCCTCAGCATGTGTCTTaGACACATTCCTTGGCTGCC +
Preference number: 2 (lower is better)
Translates to: KDSKRNSYYFQISTPCKVPQHVS*THSLAA
Trigger: GGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGG...AACTTTACAGGGTGTGCTGATTTGGAAGTAGTAACTATTTCTTTTGGAGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
3UTR-3UTR TCA 90 bp TTCACAATACCTTCCCTAAGCAGGCACTTAAGTGTGACAAATATAAGGGCCTTTAAAAGGAGGATTAGGTaGATGGGGGTGGTTTACTAT +
Preference number: 2 (lower is better)
Translates to: FTIPSLSRHLSVTNIRAFKRRIR*MGVVYY
Trigger: ATAGTAAACCACCCCCATTCACCTAATCCTCCTTTT...AAAGGCCCTTATATTTGTCACACTTAAGTGCCTGCTTAGGGAAGGTATTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
3UTR-3UTR TCA 90 bp AGTCAGATGGAGAACTCTGCACAAATCAGATTTTACTGGTCTGCATGTATTGACAAAAGGAGGATTAGGTaGATGGGGGTGGTTTACTAT +
Preference number: 2 (lower is better)
Translates to: SQMENSAQIRFYWSACIDKRRIR*MGVVYY
Trigger: ATAGTAAACCACCCCCATTCACCTAATCCTCCTTTT...GTCAATACATGCAGACCAGTAAAATCTGATTTGTGCAGAGTTCTCCATCTGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
3UTR-3UTR CCA 90 bp TTCACAATACCTTCCCTAAGCAGGCACTTAAGTGTGACAAATATAAGGGCCTTTCTTGGACACATTCCTTaGCTGCCAATAAATTCCACA +
Preference number: 2 (lower is better)
Translates to: FTIPSLSRHLSVTNIRAFLGHIP*LPINST
Trigger: TGTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAG...AAAGGCCCTTATATTTGTCACACTTAAGTGCCTGCTTAGGGAAGGTATTGTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
3UTR-3UTR TCA 90 bp AGTCAGATGGAGAACTCTGCACAAATCAGATTTTACTGGTCTGCATGTATTGACTGTAGCCACACAATCTaGAATGTCAAAATGTCGATG +
Preference number: 2 (lower is better)
Translates to: SQMENSAQIRFYWSACIDCSHTI*NVKMSM
Trigger: CATCGACATTTTGACATTTCAGATTGTGTGGCTACA...GTCAATACATGCAGACCAGTAAAATCTGATTTGTGCAGAGTTCTCCATCTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
3UTR-3UTR CCA 90 bp AAAGACTCCAAAAGAAATAGTTACTACTTCCAAATCAGCACACCCTGTAAAGTTTGTAAAGACAGTGAGTaGGGACAGCCAGGTTTCAGA +
Preference number: 2 (lower is better)
Translates to: KDSKRNSYYFQISTPCKVCKDSE*GQPGFR
Trigger: TCTGAAACCTGGCTGTCCCCACTCACTGTCTTTACA...AACTTTACAGGGTGTGCTGATTTGGAAGTAGTAACTATTTCTTTTGGAGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
3UTR-3UTR CCA 90 bp ATTCAAAACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCAACCACAGAATAAACTaGTTTGGAACCAGAAAAGTA +
Preference number: 2 (lower is better)
Translates to: IQNLSMCLGHIPWLPINSNHRIN*FGTRKV
Trigger: TACTTTTCTGGTTCCAAACCAGTTTATTCTGTGGTT...GGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTTTTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
3UTR-3UTR GCA 90 bp TTTCTAATACTTTTTCACAATACCTTCCCTAAGCAGGCACTTAAGTGTGACAAAGTCACCACTTGTAAGTaGGTTTCCATCATCTTTGAG +
Preference number: 2 (lower is better)
Translates to: FLILFHNTFPKQALKCDKVTTCK*VSIIFE
Trigger: CTCAAAGATGATGGAAACGCACTTACAAGTGGTGAC...TTTGTCACACTTAAGTGCCTGCTTAGGGAAGGTATTGTGAAAAAGTATTAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
3UTR-3UTR GCA 90 bp AGTCAGATGGAGAACTCTGCACAAATCAGATTTTACTGGTCTGCATGTATTGACCACGTTACCTATAAGTaGCAACAGTGTTATTTTTGT +
Preference number: 2 (lower is better)
Translates to: SQMENSAQIRFYWSACIDHVTYK*QQCYFC
Trigger: ACAAAAATAACACTGTTGGCACTTATAGGTAACGTG...GTCAATACATGCAGACCAGTAAAATCTGATTTGTGCAGAGTTCTCCATCTGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
3UTR-3UTR GCA 90 bp AGTCAGATGGAGAACTCTGCACAAATCAGATTTTACTGGTCTGCATGTATTGACGAGAGGGAAACCAACTaGAAGTTATCATATATACAT +
Preference number: 2 (lower is better)
Translates to: SQMENSAQIRFYWSACIDERETN*KLSYIH
Trigger: ATGTATATATGATAACTTGCAGTTGGTTTCCCTCTC...GTCAATACATGCAGACCAGTAAAATCTGATTTGTGCAGAGTTCTCCATCTGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
3UTR-3UTR CCA 90 bp TTCACAATACCTTCCCTAAGCAGGCACTTAAGTGTGACAAATATAAGGGCCTTTAACCACAGAATAAACTaGTTTGGAACCAGAAAAGTA +
Preference number: 2 (lower is better)
Translates to: FTIPSLSRHLSVTNIRAFNHRIN*FGTRKV
Trigger: TACTTTTCTGGTTCCAAACCAGTTTATTCTGTGGTT...AAAGGCCCTTATATTTGTCACACTTAAGTGCCTGCTTAGGGAAGGTATTGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
3UTR-3UTR CCA 90 bp AAAGACTCCAAAAGAAATAGTTACTACTTCCAAATCAGCACACCCTGTAAAGTTGGAGGATTAGGTGAATaGGGGTGGTTTACTATATCA +
Preference number: 2 (lower is better)
Translates to: KDSKRNSYYFQISTPCKVGGLGE*GWFTIS
Trigger: TGATATAGTAAACCACCCCCATTCACCTAATCCTCC...AACTTTACAGGGTGTGCTGATTTGGAAGTAGTAACTATTTCTTTTGGAGTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
3UTR-3UTR CCA 90 bp AGTCAGATGGAGAACTCTGCACAAATCAGATTTTACTGGTCTGCATGTATTGACTTCTCTTCCTTAATTTaGCTTCTAAGGACAAAGGAT +
Preference number: 2 (lower is better)
Translates to: SQMENSAQIRFYWSACIDFSSLI*LLRTKD
Trigger: ATCCTTTGTCCTTAGAAGCCAAATTAAGGAAGAGAA...GTCAATACATGCAGACCAGTAAAATCTGATTTGTGCAGAGTTCTCCATCTGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
3UTR-3UTR TCA 90 bp AAAGACTCCAAAAGAAATAGTTACTACTTCCAAATCAGCACACCCTGTAAAGTTCTAGTTACAATGCTGTaGTTAGCTTGCTTGAACGAT +
Preference number: 2 (lower is better)
Translates to: KDSKRNSYYFQISTPCKVLVTML*LACLND
Trigger: ATCGTTCAAGCAAGCTAATCACAGCATTGTAACTAG...AACTTTACAGGGTGTGCTGATTTGGAAGTAGTAACTATTTCTTTTGGAGTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
3UTR-3UTR CCA 90 bp AAAGACTCCAAAAGAAATAGTTACTACTTCCAAATCAGCACACCCTGTAAAGTTAACCACAGAATAAACTaGTTTGGAACCAGAAAAGTA +
Preference number: 2 (lower is better)
Translates to: KDSKRNSYYFQISTPCKVNHRIN*FGTRKV
Trigger: TACTTTTCTGGTTCCAAACCAGTTTATTCTGTGGTT...AACTTTACAGGGTGTGCTGATTTGGAAGTAGTAACTATTTCTTTTGGAGTCTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
3UTR-3UTR CAA 90 bp AGTCAGATGGAGAACTCTGCACAAATCAGATTTTACTGGTCTGCATGTATTGACTACAGTAGTCCACCTTaGAACAAACTGACTGAGGGG +
Preference number: 3 (lower is better)
Translates to: SQMENSAQIRFYWSACIDYSSPP*NKLTEG
Trigger: CCCCTCAGTCAGTTTGTTCAAAGGTGGACTACTGTA...GTCAATACATGCAGACCAGTAAAATCTGATTTGTGCAGAGTTCTCCATCTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
3UTR-3UTR CAA 90 bp AGTCAGATGGAGAACTCTGCACAAATCAGATTTTACTGGTCTGCATGTATTGACATGGAAAAGATTCCCTaGACCCTGTGGTCATGCTCT +
Preference number: 3 (lower is better)
Translates to: SQMENSAQIRFYWSACIDMEKIP*TLWSCS
Trigger: AGAGCATGACCACAGGGTCAAGGGAATCTTTTCCAT...GTCAATACATGCAGACCAGTAAAATCTGATTTGTGCAGAGTTCTCCATCTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
3UTR CCA 72 bp GCTCACAGGGGCTCTTCTAGATGTAAAGACAGTGAGTaGGGACAGCCAGGTTTCAGATATCAAATAATATTT +
Preference number: 3 (lower is better)
Translates to: AHRGSSRCKDSE*GQPGFRYQIIF
Trigger: AAATATTATTTGATATCTGAAACCTGGCTGTCCCCACTCACTGTCTTTACATCTAGAAGAGCCCCTGTGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
3UTR TCA 72 bp CTCACTGCAAACAACTGTCCTCTAGTTACAATGCTGTaGTTAGCTTGCTTGAACGATCTTCTGAGTAACTGT +
Preference number: 3 (lower is better)
Translates to: LTANNCPLVTML*LACLNDLLSNC
Trigger: ACAGTTACTCAGAAGATCGTTCAAGCAAGCTAATCACAGCATTGTAACTAGAGGACAGTTGTTTGCAGTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
3UTR-3UTR CAA 90 bp AGTCAGATGGAGAACTCTGCACAAATCAGATTTTACTGGTCTGCATGTATTGACAATGCTGTGATTAGCTaGCTTGAACGATCTTCTGAG +
Preference number: 3 (lower is better)
Translates to: SQMENSAQIRFYWSACIDNAVIS*LERSSE
Trigger: CTCAGAAGATCGTTCAAGCAAGCTAATCACAGCATT...GTCAATACATGCAGACCAGTAAAATCTGATTTGTGCAGAGTTCTCCATCTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
3UTR-3UTR CAA 90 bp AGTCAGATGGAGAACTCTGCACAAATCAGATTTTACTGGTCTGCATGTATTGACCTTCACCTAAAAATTTaGGTCACCACTTGTAAGTGC +
Preference number: 3 (lower is better)
Translates to: SQMENSAQIRFYWSACIDLHLKI*VTTCKC
Trigger: GCACTTACAAGTGGTGACCAAAATTTTTAGGTGAAG...GTCAATACATGCAGACCAGTAAAATCTGATTTGTGCAGAGTTCTCCATCTGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
3UTR-3UTR CAA 90 bp AGTCAGATGGAGAACTCTGCACAAATCAGATTTTACTGGTCTGCATGTATTGACCCTGTATCACTGAATTaGAAACTCTCTCAACAACCA +
Preference number: 3 (lower is better)
Translates to: SQMENSAQIRFYWSACIDPVSLN*KLSQQP
Trigger: TGGTTGTTGAGAGAGTTTCAAATTCAGTGATACAGG...GTCAATACATGCAGACCAGTAAAATCTGATTTGTGCAGAGTTCTCCATCTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
3UTR-3UTR CAA 90 bp AAAGACTCCAAAAGAAATAGTTACTACTTCCAAATCAGCACACCCTGTAAAGTTATGGAAAAGATTCCCTaGACCCTGTGGTCATGCTCT +
Preference number: 3 (lower is better)
Translates to: KDSKRNSYYFQISTPCKVMEKIP*TLWSCS
Trigger: AGAGCATGACCACAGGGTCAAGGGAATCTTTTCCAT...AACTTTACAGGGTGTGCTGATTTGGAAGTAGTAACTATTTCTTTTGGAGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
3UTR CCA 72 bp ATTCAAAACCTCAGCATGTGTCTTGGACACATTCCTTaGCTGCCAATAAATTCCACAGTTCATTCTCTTTCT +
Preference number: 3 (lower is better)
Translates to: IQNLSMCLGHIP*LPINSTVHSLS
Trigger: AGAAAGAGAATGAACTGTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTTTTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
3UTR-3UTR CAA 90 bp TTTCTAATACTTTTTCACAATACCTTCCCTAAGCAGGCACTTAAGTGTGACAAATCTTGGACACATTCCTaGGCTGCCAATAAATTCCAC +
Preference number: 3 (lower is better)
Translates to: FLILFHNTFPKQALKCDKSWTHS*AANKFH
Trigger: GTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAGA...TTTGTCACACTTAAGTGCCTGCTTAGGGAAGGTATTGTGAAAAAGTATTAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
3UTR-3UTR CAA 90 bp AGTCAGATGGAGAACTCTGCACAAATCAGATTTTACTGGTCTGCATGTATTGACTTTCTCTTCCTTAATTaGGCTTCTAAGGACAAAGGA +
Preference number: 3 (lower is better)
Translates to: SQMENSAQIRFYWSACIDFLFLN*ASKDKG
Trigger: TCCTTTGTCCTTAGAAGCCAAATTAAGGAAGAGAAA...GTCAATACATGCAGACCAGTAAAATCTGATTTGTGCAGAGTTCTCCATCTGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
3UTR TCA 72 bp GATCCCAAGAGCAGTACAGATTGTAGCCACACAATCTaGAATGTCAAAATGTCGATGTGTTTTTATGTACAT +
Preference number: 3 (lower is better)
Translates to: DPKSSTDCSHTI*NVKMSMCFYVH
Trigger: ATGTACATAAAAACACATCGACATTTTGACATTTCAGATTGTGTGGCTACAATCTGTACTGCTCTTGGGATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
3UTR-3UTR CAA 90 bp AAAGACTCCAAAAGAAATAGTTACTACTTCCAAATCAGCACACCCTGTAAAGTTCTTCACCTAAAAATTTaGGTCACCACTTGTAAGTGC +
Preference number: 3 (lower is better)
Translates to: KDSKRNSYYFQISTPCKVLHLKI*VTTCKC
Trigger: GCACTTACAAGTGGTGACCAAAATTTTTAGGTGAAG...AACTTTACAGGGTGTGCTGATTTGGAAGTAGTAACTATTTCTTTTGGAGTCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
3UTR CCA 72 bp GTGTTTTACTTATTAGAGAAACTTCACACACTCACATaGATAGCACTTGCAAGAGGAAGAAAATCAACAACA +
Preference number: 3 (lower is better)
Translates to: VFYLLEKLHTLT*IALARGRKSTT
Trigger: TGTTGTTGATTTTCTTCCTCTTGCAAGTGCTATCCATGTGAGTGTGTGAAGTTTCTCTAATAAGTAAAACAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR CCA 90 bp AACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCACAGTTAGCGCGAACTGCCCGTaGGTCGGCTGGGTCGGCGGC +
Preference number: 4 (lower is better)
Translates to: NLSMCLGHIPWLPINSTVSANCP*VGWVGG
Trigger: GCCGCCGACCCAGCCGACCCACGGGCAGTTCGCGCT...AACTGTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR CCA 90 bp ATTCAAAACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCTGCCCGTGGGTCGGCTaGGTCGGCGGCATCCTGCCC +
Preference number: 4 (lower is better)
Translates to: IQNLSMCLGHIPWLPINSCPWVG*VGGILP
Trigger: GGGCAGGATGCCGCCGACCCAGCCGACCCACGGGCA...GGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTTTTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR CCA 90 bp ATTCAAAACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCAGCGCGAACTGCCCGTaGGTCGGCTGGGTCGGCGGC +
Preference number: 4 (lower is better)
Translates to: IQNLSMCLGHIPWLPINSSANCP*VGWVGG
Trigger: GCCGCCGACCCAGCCGACCCACGGGCAGTTCGCGCT...GGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTTTTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR GCA 90 bp AGTCAGATGGAGAACTCTGCACAAATCAGATTTTACTGGTCTGCATGTATTGACCCGTCTGGGCTGGCGTaGTGGCTGGGCCCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: SQMENSAQIRFYWSACIDPSGLA*WLGPLG
Trigger: GCCAAGGGGGCCCAGCCAGCACGCCAGCCCAGACGG...GTCAATACATGCAGACCAGTAAAATCTGATTTGTGCAGAGTTCTCCATCTGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR CCA 90 bp TTCACAATACCTTCCCTAAGCAGGCACTTAAGTGTGACAAATATAAGGGCCTTTCTGGCTGGGCCCCCTTaGCCGGGCGTCTGTGGCGTG +
Preference number: 4 (lower is better)
Translates to: FTIPSLSRHLSVTNIRAFLAGPP*PGVCGV
Trigger: CACGCCACAGACGCCCGGCCAAGGGGGCCCAGCCAG...AAAGGCCCTTATATTTGTCACACTTAAGTGCCTGCTTAGGGAAGGTATTGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR CCA 90 bp AACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCACAGTTAGGAGCGGGGCGACGTaGAGGGGCATGGAGCACTGC +
Preference number: 4 (lower is better)
Translates to: NLSMCLGHIPWLPINSTVRSGAT*RGMEHC
Trigger: GCAGTGCTCCATGCCCCTCCACGTCGCCCCGCTCCT...AACTGTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR GCA 90 bp AACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCACAGTTTTGGTCAGCGCGAACTaGCCGTGGGTCGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: NLSMCLGHIPWLPINSTVLVSAN*PWVGWV
Trigger: GACCCAGCCGACCCACGGGCAGTTCGCGCTGACCAA...AACTGTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR CCA 90 bp ATTCAAAACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCTGCCGAAGCGCGACGTaGGATAGGGCTCCGCGCGCA +
Preference number: 4 (lower is better)
Translates to: IQNLSMCLGHIPWLPINSCRSAT*DRAPRA
Trigger: TGCGCGCGGAGCCCTATCCCACGTCGCGCTTCGGCA...GGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTTTTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR CCA 90 bp TTCACAATACCTTCCCTAAGCAGGCACTTAAGTGTGACAAATATAAGGGCCTTTTGCCGAAGCGCGACGTaGGATAGGGCTCCGCGCGCA +
Preference number: 4 (lower is better)
Translates to: FTIPSLSRHLSVTNIRAFCRSAT*DRAPRA
Trigger: TGCGCGCGGAGCCCTATCCCACGTCGCGCTTCGGCA...AAAGGCCCTTATATTTGTCACACTTAAGTGCCTGCTTAGGGAAGGTATTGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR TCA 90 bp TTCACAATACCTTCCCTAAGCAGGCACTTAAGTGTGACAAATATAAGGGCCTTTCCGGGGGAATCAGCATaGAAGTGGTCCGCGTCGGGC +
Preference number: 4 (lower is better)
Translates to: FTIPSLSRHLSVTNIRAFPGESA*KWSASG
Trigger: GCCCGACGCGGACCACTTTCATGCTGATTCCCCCGG...AAAGGCCCTTATATTTGTCACACTTAAGTGCCTGCTTAGGGAAGGTATTGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR GCA 90 bp ATTCAAAACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCGCCGCCTTTTGTGTGTaGGAGGGTGCAAGAGGGCGC +
Preference number: 4 (lower is better)
Translates to: IQNLSMCLGHIPWLPINSAAFCV*EGARGR
Trigger: GCGCCCTCTTGCACCCTCGCACACACAAAAGGCGGC...GGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTTTTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR GCA 90 bp AAGACTTACTTTCTCCATTCTGCTAATTGTCTCCCAATCTCCTTAAATGCACTTTGCGTCCGGACTTCCTaGTCCCCTGGCTGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: KTYFLHSANCLPISLNALCVRTS*SPGCGR
Trigger: CCGCCCGCAGCCAGGGGAGCAGGAAGTCCGGACGCA...AAGTGCATTTAAGGAGATTGGGAGACAATTAGCAGAATGGAGAAAGTAAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR GCA 90 bp AAGACTTACTTTCTCCATTCTGCTAATTGTCTCCCAATCTCCTTAAATGCACTTGGGTCGGCGGCATCCTaGCCCTCTGCACCGCTTCCC +
Preference number: 4 (lower is better)
Translates to: KTYFLHSANCLPISLNALGSAAS*PSAPLP
Trigger: GGGAAGCGGTGCAGAGGGGCAGGATGCCGCCGACCC...AAGTGCATTTAAGGAGATTGGGAGACAATTAGCAGAATGGAGAAAGTAAGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR GCA 90 bp AGTCAGATGGAGAACTCTGCACAAATCAGATTTTACTGGTCTGCATGTATTGACTTGGTCAGCGCGAACTaGCCGTGGGTCGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: SQMENSAQIRFYWSACIDLVSAN*PWVGWV
Trigger: GACCCAGCCGACCCACGGGCAGTTCGCGCTGACCAA...GTCAATACATGCAGACCAGTAAAATCTGATTTGTGCAGAGTTCTCCATCTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR CCA 90 bp TTTCTAATACTTTTTCACAATACCTTCCCTAAGCAGGCACTTAAGTGTGACAAACCCGCAGTCGCTGGGTaGAGGCCGCTCGCCGTTCCC +
Preference number: 4 (lower is better)
Translates to: FLILFHNTFPKQALKCDKPAVAG*RPLAVP
Trigger: GGGAACGGCGAGCGGCCTCCACCCAGCGACTGCGGG...TTTGTCACACTTAAGTGCCTGCTTAGGGAAGGTATTGTGAAAAAGTATTAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR CCA 90 bp TTTCTAATACTTTTTCACAATACCTTCCCTAAGCAGGCACTTAAGTGTGACAAAGGAGGGCGCCCCGGGTaGCTCGGGGGCTGGTTGGTT +
Preference number: 4 (lower is better)
Translates to: FLILFHNTFPKQALKCDKGGRPG*LGGWLV
Trigger: AACCAACCAGCCCCCGAGCCACCCGGGGCGCCCTCC...TTTGTCACACTTAAGTGCCTGCTTAGGGAAGGTATTGTGAAAAAGTATTAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR CCA 90 bp AAAGACTCCAAAAGAAATAGTTACTACTTCCAAATCAGCACACCCTGTAAAGTTCCGGGCACCTCGTCCTaGGGGTCGCGCCACGTGCTG +
Preference number: 4 (lower is better)
Translates to: KDSKRNSYYFQISTPCKVPGTSS*GSRHVL
Trigger: CAGCACGTGGCGCGACCCCCAGGACGAGGTGCCCGG...AACTTTACAGGGTGTGCTGATTTGGAAGTAGTAACTATTTCTTTTGGAGTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR CCA 90 bp TTTCTAATACTTTTTCACAATACCTTCCCTAAGCAGGCACTTAAGTGTGACAAATGCCCGTGGGTCGGCTaGGTCGGCGGCATCCTGCCC +
Preference number: 4 (lower is better)
Translates to: FLILFHNTFPKQALKCDKCPWVG*VGGILP
Trigger: GGGCAGGATGCCGCCGACCCAGCCGACCCACGGGCA...TTTGTCACACTTAAGTGCCTGCTTAGGGAAGGTATTGTGAAAAAGTATTAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR CCA 90 bp AAAGACTCCAAAAGAAATAGTTACTACTTCCAAATCAGCACACCCTGTAAAGTTAGCGCGAACTGCCCGTaGGTCGGCTGGGTCGGCGGC +
Preference number: 4 (lower is better)
Translates to: KDSKRNSYYFQISTPCKVSANCP*VGWVGG
Trigger: GCCGCCGACCCAGCCGACCCACGGGCAGTTCGCGCT...AACTTTACAGGGTGTGCTGATTTGGAAGTAGTAACTATTTCTTTTGGAGTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR GCA 90 bp AAAGACTCCAAAAGAAATAGTTACTACTTCCAAATCAGCACACCCTGTAAAGTTGAGTGGCCGGAGCGCTaGCCGGGTCCGGGGGAATCA +
Preference number: 4 (lower is better)
Translates to: KDSKRNSYYFQISTPCKVEWPER*PGPGES
Trigger: TGATTCCCCCGGACCCGGGCAGCGCTCCGGCCACTC...AACTTTACAGGGTGTGCTGATTTGGAAGTAGTAACTATTTCTTTTGGAGTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR CCA 90 bp AAGACTTACTTTCTCCATTCTGCTAATTGTCTCCCAATCTCCTTAAATGCACTTTGCCGAAGCGCGACGTaGGATAGGGCTCCGCGCGCA +
Preference number: 4 (lower is better)
Translates to: KTYFLHSANCLPISLNALCRSAT*DRAPRA
Trigger: TGCGCGCGGAGCCCTATCCCACGTCGCGCTTCGGCA...AAGTGCATTTAAGGAGATTGGGAGACAATTAGCAGAATGGAGAAAGTAAGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR CCA 90 bp AAGACTTACTTTCTCCATTCTGCTAATTGTCTCCCAATCTCCTTAAATGCACTTAGGAGCGGGGCGACGTaGAGGGGCATGGAGCACTGC +
Preference number: 4 (lower is better)
Translates to: KTYFLHSANCLPISLNALRSGAT*RGMEHC
Trigger: GCAGTGCTCCATGCCCCTCCACGTCGCCCCGCTCCT...AAGTGCATTTAAGGAGATTGGGAGACAATTAGCAGAATGGAGAAAGTAAGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR CCA 90 bp AACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCACAGTTCCGAATCTCGTCGGCTaGTTGGGGTACTGGCTCCTA +
Preference number: 4 (lower is better)
Translates to: NLSMCLGHIPWLPINSTVPNLVG*LGYWLL
Trigger: TAGGAGCCAGTACCCCAACCAGCCGACGAGATTCGG...AACTGTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR TCA 90 bp AACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCACAGTTGAGACCACAGGCATCTaGGGTGAACAGGACTATGGC +
Preference number: 4 (lower is better)
Translates to: NLSMCLGHIPWLPINSTVETTGI*GEQDYG
Trigger: GCCATAGTCCTGTTCACCTCAGATGCCTGTGGTCTC...AACTGTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR GCA 90 bp AAGACTTACTTTCTCCATTCTGCTAATTGTCTCCCAATCTCCTTAAATGCACTTTTGTGTGTGCGAGGGTaGAAGAGGGCGCGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: KTYFLHSANCLPISLNALLCVRG*KRAREG
Trigger: GCCCTCCCGCGCCCTCTTGCACCCTCGCACACACAA...AAGTGCATTTAAGGAGATTGGGAGACAATTAGCAGAATGGAGAAAGTAAGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR GCA 90 bp AACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCACAGTTAGGGGCATGGAGCACTaGGCCGCATTCAACACAAAC +
Preference number: 4 (lower is better)
Translates to: NLSMCLGHIPWLPINSTVRGMEH*AAFNTN
Trigger: GTTTGTGTTGAATGCGGCGCAGTGCTCCATGCCCCT...AACTGTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR GCA 90 bp AAGACTTACTTTCTCCATTCTGCTAATTGTCTCCCAATCTCCTTAAATGCACTTGGGTCGGCGGCATCCTaGCCCTCTGCACCGCAAAAC +
Preference number: 4 (lower is better)
Translates to: KTYFLHSANCLPISLNALGSAAS*PSAPQN
Trigger: GTTTTGCGGTGCAGAGGGGCAGGATGCCGCCGACCC...AAGTGCATTTAAGGAGATTGGGAGACAATTAGCAGAATGGAGAAAGTAAGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421109.6
CDS-3UTR CCA 90 bp ATTCAAAACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCCCGAATCTCGTCGGCTaGTTGGGGTACTGGCTCCTA +
Preference number: 4 (lower is better)
Translates to: IQNLSMCLGHIPWLPINSPNLVG*LGYWLL
Trigger: TAGGAGCCAGTACCCCAACCAGCCGACGAGATTCGG...GGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTTTTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR GCA 90 bp TTCACAATACCTTCCCTAAGCAGGCACTTAAGTGTGACAAATATAAGGGCCTTTCTCTTAGAGCTGGTGTaGAGCCGAGGAGTTGGCGGA +
Preference number: 4 (lower is better)
Translates to: FTIPSLSRHLSVTNIRAFLLELV*SRGVGG
Trigger: TCCGCCAACTCCTCGGCTGCACACCAGCTCTAAGAG...AAAGGCCCTTATATTTGTCACACTTAAGTGCCTGCTTAGGGAAGGTATTGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR GCA 90 bp AAGACTTACTTTCTCCATTCTGCTAATTGTCTCCCAATCTCCTTAAATGCACTTGGCATCCTGCCCCTCTaGACCGCTTCCCGTCTCATG +
Preference number: 4 (lower is better)
Translates to: KTYFLHSANCLPISLNALGILPL*TASRLM
Trigger: CATGAGACGGGAAGCGGTGCAGAGGGGCAGGATGCC...AAGTGCATTTAAGGAGATTGGGAGACAATTAGCAGAATGGAGAAAGTAAGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR GCA 90 bp AAAGACTCCAAAAGAAATAGTTACTACTTCCAAATCAGCACACCCTGTAAAGTTTTGGTCAGCGCGAACTaGCCGTGGGTCGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: KDSKRNSYYFQISTPCKVLVSAN*PWVGWV
Trigger: GACCCAGCCGACCCACGGGCAGTTCGCGCTGACCAA...AACTTTACAGGGTGTGCTGATTTGGAAGTAGTAACTATTTCTTTTGGAGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR GCA 90 bp ATTCAAAACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCAGGGGCATGGAGCACTaGGCCGCATTCAACACAAAC +
Preference number: 4 (lower is better)
Translates to: IQNLSMCLGHIPWLPINSRGMEH*AAFNTN
Trigger: GTTTGTGTTGAATGCGGCGCAGTGCTCCATGCCCCT...GGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTTTTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR CCA 90 bp AACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCACAGTTCCTCAGCATGTGTCTTaGACACATTCCTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: NLSMCLGHIPWLPINSTVPQHVS*THSLAA
Trigger: GGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGG...AACTGTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR TCA 90 bp AGTCAGATGGAGAACTCTGCACAAATCAGATTTTACTGGTCTGCATGTATTGACGAGACCACAGGCATCTaGGGTGAACAGGACTATGGC +
Preference number: 4 (lower is better)
Translates to: SQMENSAQIRFYWSACIDETTGI*GEQDYG
Trigger: GCCATAGTCCTGTTCACCTCAGATGCCTGTGGTCTC...GTCAATACATGCAGACCAGTAAAATCTGATTTGTGCAGAGTTCTCCATCTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR TCA 90 bp AGTCAGATGGAGAACTCTGCACAAATCAGATTTTACTGGTCTGCATGTATTGACCAATTGCTCTATGACTaGGGAGGAGACGGTGCGGAG +
Preference number: 4 (lower is better)
Translates to: SQMENSAQIRFYWSACIDQLLYD*GGDGAE
Trigger: CTCCGCACCGTCTCCTCCTCAGTCATAGAGCAATTG...GTCAATACATGCAGACCAGTAAAATCTGATTTGTGCAGAGTTCTCCATCTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR TCA 90 bp AACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCACAGTTTTTGTACATAGCTGCTaGGGAATGCAAGCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: NLSMCLGHIPWLPINSTVFVHSC*GMQASP
Trigger: AGGCGAGGCTTGCATTCCTCAGCAGCTATGTACAAA...AACTGTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421109.6
CDS-3UTR GCA 90 bp AAAGACTCCAAAAGAAATAGTTACTACTTCCAAATCAGCACACCCTGTAAAGTTTGTTGCTGCTGCTGCTaGTTGTCGCTACCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: KDSKRNSYYFQISTPCKVCCCCC*LSLPGP
Trigger: CGGCCCGGGTAGCGACAAGCAGCAGCAGCAGCAACA...AACTTTACAGGGTGTGCTGATTTGGAAGTAGTAACTATTTCTTTTGGAGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR CCA 90 bp AACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCACAGTTTGTCGATGGCTTGTCTaGCCCGGTGTGTTTGTTTTG +
Preference number: 4 (lower is better)
Translates to: NLSMCLGHIPWLPINSTVCRWLV*PGVFVL
Trigger: CAAAACAAACACACCGGGCCAGACAAGCCATCGACA...AACTGTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR CCA 90 bp AACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCACAGTTAGGCTCTCTCAGCCTTaGAAAACCCTGCACACTAAC +
Preference number: 4 (lower is better)
Translates to: NLSMCLGHIPWLPINSTVRLSQP*KTLHTN
Trigger: GTTAGTGTGCAGGGTTTTCCAAGGCTGAGAGAGCCT...AACTGTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421109.6
CDS-3UTR TCA 90 bp AACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCACAGTTAAAACAATTGCTCTATaGCTGAGGAGGAGACGGTGC +
Preference number: 4 (lower is better)
Translates to: NLSMCLGHIPWLPINSTVKTIAL*LRRRRC
Trigger: GCACCGTCTCCTCCTCAGTCATAGAGCAATTGTTTT...AACTGTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR TCA 90 bp ATTCAAAACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCTGGAAAAGATTCCCTTaGCCCTGTGGTCATGCTCTC +
Preference number: 4 (lower is better)
Translates to: IQNLSMCLGHIPWLPINSWKRFP*PCGHAL
Trigger: GAGAGCATGACCACAGGGTCAAGGGAATCTTTTCCA...GGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTTTTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR GCA 90 bp AAGACTTACTTTCTCCATTCTGCTAATTGTCTCCCAATCTCCTTAAATGCACTTCATATCTATGGGGGCTaGGTCCGGACTTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: KTYFLHSANCLPISLNALHIYGG*VRTSCS
Trigger: GGAGCAGGAAGTCCGGACGCAGCCCCCATAGATATG...AAGTGCATTTAAGGAGATTGGGAGACAATTAGCAGAATGGAGAAAGTAAGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR GCA 90 bp TTCACAATACCTTCCCTAAGCAGGCACTTAAGTGTGACAAATATAAGGGCCTTTCGTGCTGACTACCATTaGCATATCTATGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: FTIPSLSRHLSVTNIRAFRADYH*HIYGGC
Trigger: GCAGCCCCCATAGATATGGCAATGGTAGTCAGCACG...AAAGGCCCTTATATTTGTCACACTTAAGTGCCTGCTTAGGGAAGGTATTGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR GCA 90 bp ATTCAAAACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCAGGTCCCAAACCGCTTaGATCTTCCTCCTAAACTGG +
Preference number: 4 (lower is better)
Translates to: IQNLSMCLGHIPWLPINSRSQTA*IFLLNW
Trigger: CCAGTTTAGGAGGAAGATGCAAGCGGTTTGGGACCT...GGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTTTTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421109.6
CDS-3UTR CCA 90 bp ATTCAAAACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCTGGAAGATCCGTATGTaGTCCATAAAGGCGACCACC +
Preference number: 4 (lower is better)
Translates to: IQNLSMCLGHIPWLPINSWKIRM*SIKATT
Trigger: GGTGGTCGCCTTTATGGACCACATACGGATCTTCCA...GGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTTTTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR CCA 90 bp AACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCACAGTTTTCTCCACTTGCTCTTaGAAGATCCGTATGTGGTCC +
Preference number: 4 (lower is better)
Translates to: NLSMCLGHIPWLPINSTVFSTCS*KIRMWS
Trigger: GGACCACATACGGATCTTCCAAGAGCAAGTGGAGAA...AACTGTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR CCA 90 bp AACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCACAGTTTGCAAGCTTTCCACATaGGCTACATCAGAGAGACCA +
Preference number: 4 (lower is better)
Translates to: NLSMCLGHIPWLPINSTVCKLST*ATSERP
Trigger: TGGTCTCTCTGATGTAGCCCATGTGGAAAGCTTGCA...AACTGTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR CCA 90 bp AAGACTTACTTTCTCCATTCTGCTAATTGTCTCCCAATCTCCTTAAATGCACTTCCGAATCTCGTCGGCTaGTTGGGGTACTGGCTCCTA +
Preference number: 4 (lower is better)
Translates to: KTYFLHSANCLPISLNALPNLVG*LGYWLL
Trigger: TAGGAGCCAGTACCCCAACCAGCCGACGAGATTCGG...AAGTGCATTTAAGGAGATTGGGAGACAATTAGCAGAATGGAGAAAGTAAGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR CCA 90 bp AACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCACAGTTTGTAAAGACAGTGAGTaGGGACAGCCAGGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: NLSMCLGHIPWLPINSTVCKDSE*GQPGFR
Trigger: TCTGAAACCTGGCTGTCCCCACTCACTGTCTTTACA...AACTGTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR TCA 90 bp TTTCTAATACTTTTTCACAATACCTTCCCTAAGCAGGCACTTAAGTGTGACAAAGAGGGGAGGGAGAGCTaGAGTCGATTGTCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: FLILFHNTFPKQALKCDKEGRES*SRLSGF
Trigger: GAAGCCAGACAATCGACTTCAGCTCTCCCTCCCCTC...TTTGTCACACTTAAGTGCCTGCTTAGGGAAGGTATTGTGAAAAAGTATTAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR TCA 90 bp AAGACTTACTTTCTCCATTCTGCTAATTGTCTCCCAATCTCCTTAAATGCACTTCAATTGCTCTATGACTaGGGAGGAGACGGTGCGGAG +
Preference number: 4 (lower is better)
Translates to: KTYFLHSANCLPISLNALQLLYD*GGDGAE
Trigger: CTCCGCACCGTCTCCTCCTCAGTCATAGAGCAATTG...AAGTGCATTTAAGGAGATTGGGAGACAATTAGCAGAATGGAGAAAGTAAGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR CCA 90 bp AACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCACAGTTCTGAAGTCGATTGTCTaGCTTCAAGACAGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: NLSMCLGHIPWLPINSTVLKSIV*LQDRSR
Trigger: CCTACTTCTGTCTTGAAGCCAGACAATCGACTTCAG...AACTGTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR CCA 90 bp TTTCTAATACTTTTTCACAATACCTTCCCTAAGCAGGCACTTAAGTGTGACAAAAGTGGGAGCAGAACGTaGAGAAAGAGGGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: FLILFHNTFPKQALKCDKSGSRT*RKREGR
Trigger: CCTCCCCTCCCTCTTTCTCCACGTTCTGCTCCCACT...TTTGTCACACTTAAGTGCCTGCTTAGGGAAGGTATTGTGAAAAAGTATTAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR CCA 90 bp AAGACTTACTTTCTCCATTCTGCTAATTGTCTCCCAATCTCCTTAAATGCACTTCCATTGCCATATCTATaGGGGCTGCGTCCGGACTTC +
Preference number: 4 (lower is better)
Translates to: KTYFLHSANCLPISLNALPLPYL*GLRPDF
Trigger: GAAGTCCGGACGCAGCCCCCATAGATATGGCAATGG...AAGTGCATTTAAGGAGATTGGGAGACAATTAGCAGAATGGAGAAAGTAAGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR TCA 90 bp AAAGACTCCAAAAGAAATAGTTACTACTTCCAAATCAGCACACCCTGTAAAGTTGAGACCACAGGCATCTaGGGTGAACAGGACTATGGC +
Preference number: 4 (lower is better)
Translates to: KDSKRNSYYFQISTPCKVETTGI*GEQDYG
Trigger: GCCATAGTCCTGTTCACCTCAGATGCCTGTGGTCTC...AACTTTACAGGGTGTGCTGATTTGGAAGTAGTAACTATTTCTTTTGGAGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR TCA 90 bp TTCACAATACCTTCCCTAAGCAGGCACTTAAGTGTGACAAATATAAGGGCCTTTAAAACAATTGCTCTATaGCTGAGGAGGAGACGGTGC +
Preference number: 4 (lower is better)
Translates to: FTIPSLSRHLSVTNIRAFKTIAL*LRRRRC
Trigger: GCACCGTCTCCTCCTCAGTCATAGAGCAATTGTTTT...AAAGGCCCTTATATTTGTCACACTTAAGTGCCTGCTTAGGGAAGGTATTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR TCA 90 bp ATTCAAAACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCGCTTTGTTGGCCCCCTaGAAAGATGTGTCTTTGATA +
Preference number: 4 (lower is better)
Translates to: IQNLSMCLGHIPWLPINSALLAP*KDVSLI
Trigger: TATCAAAGACACATCTTTTCAGGGGGCCAACAAAGC...GGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTTTTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421109.6
CDS-3UTR GCA 90 bp AAAGACTCCAAAAGAAATAGTTACTACTTCCAAATCAGCACACCCTGTAAAGTTTCGATGTGTTGCTGCTaGTGCTGCTTGTCGCTACCC +
Preference number: 4 (lower is better)
Translates to: KDSKRNSYYFQISTPCKVSMCCC*CCLSLP
Trigger: GGGTAGCGACAAGCAGCAGCAGCAGCAACACATCGA...AACTTTACAGGGTGTGCTGATTTGGAAGTAGTAACTATTTCTTTTGGAGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR GCA 90 bp TTTCTAATACTTTTTCACAATACCTTCCCTAAGCAGGCACTTAAGTGTGACAAAAGGGGCATGGAGCACTaGGCCGCATTCAACACAAAC +
Preference number: 4 (lower is better)
Translates to: FLILFHNTFPKQALKCDKRGMEH*AAFNTN
Trigger: GTTTGTGTTGAATGCGGCGCAGTGCTCCATGCCCCT...TTTGTCACACTTAAGTGCCTGCTTAGGGAAGGTATTGTGAAAAAGTATTAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR GCA 90 bp AGTCAGATGGAGAACTCTGCACAAATCAGATTTTACTGGTCTGCATGTATTGACTTGACCCTGTGGTCATaGTCTCACAGACTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: SQMENSAQIRFYWSACIDLTLWS*SHRLKV
Trigger: TACCTTCAGTCTGTGAGAGCATGACCACAGGGTCAA...GTCAATACATGCAGACCAGTAAAATCTGATTTGTGCAGAGTTCTCCATCTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR CCA 90 bp AAGACTTACTTTCTCCATTCTGCTAATTGTCTCCCAATCTCCTTAAATGCACTTGGCTCGGGGGCTGGTTaGTTGAGGTTGGTTAGTTTT +
Preference number: 4 (lower is better)
Translates to: KTYFLHSANCLPISLNALGSGAG*LRLVSF
Trigger: AAAACTAACCAACCTCAACCAACCAGCCCCCGAGCC...AAGTGCATTTAAGGAGATTGGGAGACAATTAGCAGAATGGAGAAAGTAAGTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR CCA 90 bp AAGACTTACTTTCTCCATTCTGCTAATTGTCTCCCAATCTCCTTAAATGCACTTCCTCAGCATGTGTCTTaGACACATTCCTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: KTYFLHSANCLPISLNALPQHVS*THSLAA
Trigger: GGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGG...AAGTGCATTTAAGGAGATTGGGAGACAATTAGCAGAATGGAGAAAGTAAGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR TCA 90 bp TTCACAATACCTTCCCTAAGCAGGCACTTAAGTGTGACAAATATAAGGGCCTTTTCTTCCAAAGCACACTaGGACTTTTCCTGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: FTIPSLSRHLSVTNIRAFSSKAH*DFSCKL
Trigger: AAGCTTGCAGGAAAAGTCTCAGTGTGCTTTGGAAGA...AAAGGCCCTTATATTTGTCACACTTAAGTGCCTGCTTAGGGAAGGTATTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR TCA 90 bp AACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCACAGTTCTAGTTACAATGCTGTaGTTAGCTTGCTTGAACGAT +
Preference number: 4 (lower is better)
Translates to: NLSMCLGHIPWLPINSTVLVTML*LACLND
Trigger: ATCGTTCAAGCAAGCTAATCACAGCATTGTAACTAG...AACTGTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR TCA 90 bp AACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCACAGTTTGTAGCCACACAATCTaGAATGTCAAAATGTCGATG +
Preference number: 4 (lower is better)
Translates to: NLSMCLGHIPWLPINSTVCSHTI*NVKMSM
Trigger: CATCGACATTTTGACATTTCAGATTGTGTGGCTACA...AACTGTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR TCA 90 bp AACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCACAGTTATCTACAGAAATAAGTaGGAGTCAGATGGAGAACTC +
Preference number: 4 (lower is better)
Translates to: NLSMCLGHIPWLPINSTVIYRNK*ESDGEL
Trigger: GAGTTCTCCATCTGACTCTCACTTATTTCTGTAGAT...AACTGTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR GCA 90 bp ATTCAAAACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCAGCCTTGGAAAACCCTaGACACTAACTTTAGAGAGA +
Preference number: 4 (lower is better)
Translates to: IQNLSMCLGHIPWLPINSSLGKP*TLTLER
Trigger: TCTCTCTAAAGTTAGTGTGCAGGGTTTTCCAAGGCT...GGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTTTTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421109.6
CDS-3UTR GCA 90 bp ATTCAAAACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCCCGCAAAACCATATTTaGCTTGTTCAAGGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: IQNLSMCLGHIPWLPINSPQNHI*LVQGPK
Trigger: TTTGGGACCTTGAACAAGGCAAATATGGTTTTGCGG...GGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTTTTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421109.6
CDS-3UTR CCA 90 bp AAAGACTCCAAAAGAAATAGTTACTACTTCCAAATCAGCACACCCTGTAAAGTTGCAAAGTTTTGTCGATaGCTTGTCTGGCCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: KDSKRNSYYFQISTPCKVAKFCR*LVWPGV
Trigger: CACACCGGGCCAGACAAGCCATCGACAAAACTTTGC...AACTTTACAGGGTGTGCTGATTTGGAAGTAGTAACTATTTCTTTTGGAGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR CCA 90 bp AAGACTTACTTTCTCCATTCTGCTAATTGTCTCCCAATCTCCTTAAATGCACTTTGGAAGATCCGTATGTaGTCCATAAAGGCGACCACC +
Preference number: 4 (lower is better)
Translates to: KTYFLHSANCLPISLNALWKIRM*SIKATT
Trigger: GGTGGTCGCCTTTATGGACCACATACGGATCTTCCA...AAGTGCATTTAAGGAGATTGGGAGACAATTAGCAGAATGGAGAAAGTAAGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR CCA 90 bp AACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCACAGTTTTAGGTGAATGGGGGTaGTTTACTATATCAGTATGG +
Preference number: 4 (lower is better)
Translates to: NLSMCLGHIPWLPINSTVLGEWG*FTISVW
Trigger: CCATACTGATATAGTAAACCACCCCCATTCACCTAA...AACTGTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
3UTR CAA 72 bp GTTTTTATGTACATAACTCCAATGGAAAAGATTCCCTaGACCCTGTGGTCATGCTCTCACAGACTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: VFMYITPMEKIP*TLWSCSHRLKV
Trigger: TACCTTCAGTCTGTGAGAGCATGACCACAGGGTCAAGGGAATCTTTTCCATTGGAGTTATGTACATAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR TCA 90 bp TTTCTAATACTTTTTCACAATACCTTCCCTAAGCAGGCACTTAAGTGTGACAAATGGAAAAGATTCCCTTaGCCCTGTGGTCATGCTCTC +
Preference number: 4 (lower is better)
Translates to: FLILFHNTFPKQALKCDKWKRFP*PCGHAL
Trigger: GAGAGCATGACCACAGGGTCAAGGGAATCTTTTCCA...TTTGTCACACTTAAGTGCCTGCTTAGGGAAGGTATTGTGAAAAAGTATTAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR CCA 90 bp AAGACTTACTTTCTCCATTCTGCTAATTGTCTCCCAATCTCCTTAAATGCACTTTTCTCCACTTGCTCTTaGAAGATCCGTATGTGGTCC +
Preference number: 4 (lower is better)
Translates to: KTYFLHSANCLPISLNALFSTCS*KIRMWS
Trigger: GGACCACATACGGATCTTCCAAGAGCAAGTGGAGAA...AAGTGCATTTAAGGAGATTGGGAGACAATTAGCAGAATGGAGAAAGTAAGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR TCA 90 bp AAGACTTACTTTCTCCATTCTGCTAATTGTCTCCCAATCTCCTTAAATGCACTTTCTTCCAAAGCACACTaGGACTTTTCCTGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: KTYFLHSANCLPISLNALSSKAH*DFSCKL
Trigger: AAGCTTGCAGGAAAAGTCTCAGTGTGCTTTGGAAGA...AAGTGCATTTAAGGAGATTGGGAGACAATTAGCAGAATGGAGAAAGTAAGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR TCA 90 bp AAAGACTCCAAAAGAAATAGTTACTACTTCCAAATCAGCACACCCTGTAAAGTTAAAACAATTGCTCTATaGCTGAGGAGGAGACGGTGC +
Preference number: 4 (lower is better)
Translates to: KDSKRNSYYFQISTPCKVKTIAL*LRRRRC
Trigger: GCACCGTCTCCTCCTCAGTCATAGAGCAATTGTTTT...AACTTTACAGGGTGTGCTGATTTGGAAGTAGTAACTATTTCTTTTGGAGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR TCA 90 bp AGTCAGATGGAGAACTCTGCACAAATCAGATTTTACTGGTCTGCATGTATTGACCTAGTTACAATGCTGTaGTTAGCTTGCTTGAACGAT +
Preference number: 4 (lower is better)
Translates to: SQMENSAQIRFYWSACIDLVTML*LACLND
Trigger: ATCGTTCAAGCAAGCTAATCACAGCATTGTAACTAG...GTCAATACATGCAGACCAGTAAAATCTGATTTGTGCAGAGTTCTCCATCTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR TCA 90 bp ATTCAAAACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCGTGGGTTGGAAACCTTaGATAAGAACAAAATTGCAA +
Preference number: 4 (lower is better)
Translates to: IQNLSMCLGHIPWLPINSVGWKP*IRTKLQ
Trigger: TTGCAATTTTGTTCTTATTCAAGGTTTCCAACCCAC...GGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTTTTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR TCA 90 bp TTCACAATACCTTCCCTAAGCAGGCACTTAAGTGTGACAAATATAAGGGCCTTTATCTACAGAAATAAGTaGGAGTCAGATGGAGAACTC +
Preference number: 4 (lower is better)
Translates to: FTIPSLSRHLSVTNIRAFIYRNK*ESDGEL
Trigger: GAGTTCTCCATCTGACTCTCACTTATTTCTGTAGAT...AAAGGCCCTTATATTTGTCACACTTAAGTGCCTGCTTAGGGAAGGTATTGTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR GCA 90 bp AAGACTTACTTTCTCCATTCTGCTAATTGTCTCCCAATCTCCTTAAATGCACTTCGGACGAAAAACAATTaGTCTATGACTGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KTYFLHSANCLPISLNALRTKNN*SMTEEE
Trigger: CTCCTCCTCAGTCATAGAGCAATTGTTTTTCGTCCG...AAGTGCATTTAAGGAGATTGGGAGACAATTAGCAGAATGGAGAAAGTAAGTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR GCA 90 bp TTTCTAATACTTTTTCACAATACCTTCCCTAAGCAGGCACTTAAGTGTGACAAATTGACCCTGTGGTCATaGTCTCACAGACTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: FLILFHNTFPKQALKCDKLTLWS*SHRLKV
Trigger: TACCTTCAGTCTGTGAGAGCATGACCACAGGGTCAA...TTTGTCACACTTAAGTGCCTGCTTAGGGAAGGTATTGTGAAAAAGTATTAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR GCA 90 bp TTCACAATACCTTCCCTAAGCAGGCACTTAAGTGTGACAAATATAAGGGCCTTTAGGTCAGCAATACTGTaGCGTAAGAACATACTTGTA +
Preference number: 4 (lower is better)
Translates to: FTIPSLSRHLSVTNIRAFRSAIL*RKNILV
Trigger: TACAAGTATGTTCTTACGGCACAGTATTGCTGACCT...AAAGGCCCTTATATTTGTCACACTTAAGTGCCTGCTTAGGGAAGGTATTGTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR CCA 90 bp AAAGACTCCAAAAGAAATAGTTACTACTTCCAAATCAGCACACCCTGTAAAGTTTGCAAGCTTTCCACATaGGCTACATCAGAGAGACCA +
Preference number: 4 (lower is better)
Translates to: KDSKRNSYYFQISTPCKVCKLST*ATSERP
Trigger: TGGTCTCTCTGATGTAGCCCATGTGGAAAGCTTGCA...AACTTTACAGGGTGTGCTGATTTGGAAGTAGTAACTATTTCTTTTGGAGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR CCA 90 bp AACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCACAGTTTTCTCTTCCTTAATTTaGCTTCTAAGGACAAAGGAT +
Preference number: 4 (lower is better)
Translates to: NLSMCLGHIPWLPINSTVFSSLI*LLRTKD
Trigger: ATCCTTTGTCCTTAGAAGCCAAATTAAGGAAGAGAA...AACTGTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR GCA 90 bp AAAGACTCCAAAAGAAATAGTTACTACTTCCAAATCAGCACACCCTGTAAAGTTCGGACGAAAAACAATTaGTCTATGACTGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KDSKRNSYYFQISTPCKVRTKNN*SMTEEE
Trigger: CTCCTCCTCAGTCATAGAGCAATTGTTTTTCGTCCG...AACTTTACAGGGTGTGCTGATTTGGAAGTAGTAACTATTTCTTTTGGAGTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR GCA 90 bp AAGACTTACTTTCTCCATTCTGCTAATTGTCTCCCAATCTCCTTAAATGCACTTGTCACCACTTGTAAGTaGGTTTCCATCATCTTTGAG +
Preference number: 4 (lower is better)
Translates to: KTYFLHSANCLPISLNALVTTCK*VSIIFE
Trigger: CTCAAAGATGATGGAAACGCACTTACAAGTGGTGAC...AAGTGCATTTAAGGAGATTGGGAGACAATTAGCAGAATGGAGAAAGTAAGTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR GCA 90 bp ATTCAAAACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCCACGTTACCTATAAGTaGCAACAGTGTTATTTTTGT +
Preference number: 4 (lower is better)
Translates to: IQNLSMCLGHIPWLPINSHVTYK*QQCYFC
Trigger: ACAAAAATAACACTGTTGGCACTTATAGGTAACGTG...GGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTTTTGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR CCA 90 bp AAGACTTACTTTCTCCATTCTGCTAATTGTCTCCCAATCTCCTTAAATGCACTTCTTGGACACATTCCTTaGCTGCCAATAAATTCCACA +
Preference number: 4 (lower is better)
Translates to: KTYFLHSANCLPISLNALLGHIP*LPINST
Trigger: TGTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAG...AAGTGCATTTAAGGAGATTGGGAGACAATTAGCAGAATGGAGAAAGTAAGTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR CCA 90 bp AAGACTTACTTTCTCCATTCTGCTAATTGTCTCCCAATCTCCTTAAATGCACTTGGAGGATTAGGTGAATaGGGGTGGTTTACTATATCA +
Preference number: 4 (lower is better)
Translates to: KTYFLHSANCLPISLNALGGLGE*GWFTIS
Trigger: TGATATAGTAAACCACCCCCATTCACCTAATCCTCC...AAGTGCATTTAAGGAGATTGGGAGACAATTAGCAGAATGGAGAAAGTAAGTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR TCA 90 bp AAAGACTCCAAAAGAAATAGTTACTACTTCCAAATCAGCACACCCTGTAAAGTTAAAAGGAGGATTAGGTaGATGGGGGTGGTTTACTAT +
Preference number: 4 (lower is better)
Translates to: KDSKRNSYYFQISTPCKVKRRIR*MGVVYY
Trigger: ATAGTAAACCACCCCCATTCACCTAATCCTCCTTTT...AACTTTACAGGGTGTGCTGATTTGGAAGTAGTAACTATTTCTTTTGGAGTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR TCA 90 bp TTTCTAATACTTTTTCACAATACCTTCCCTAAGCAGGCACTTAAGTGTGACAAAAAAAGGAGGATTAGGTaGATGGGGGTGGTTTACTAT +
Preference number: 4 (lower is better)
Translates to: FLILFHNTFPKQALKCDKKRRIR*MGVVYY
Trigger: ATAGTAAACCACCCCCATTCACCTAATCCTCCTTTT...TTTGTCACACTTAAGTGCCTGCTTAGGGAAGGTATTGTGAAAAAGTATTAGAAA
38% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR GCA 90 bp AAAGACTCCAAAAGAAATAGTTACTACTTCCAAATCAGCACACCCTGTAAAGTTGTCACCACTTGTAAGTaGGTTTCCATCATCTTTGAG +
Preference number: 4 (lower is better)
Translates to: KDSKRNSYYFQISTPCKVVTTCK*VSIIFE
Trigger: CTCAAAGATGATGGAAACGCACTTACAAGTGGTGAC...AACTTTACAGGGTGTGCTGATTTGGAAGTAGTAACTATTTCTTTTGGAGTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR GCA 90 bp TTCACAATACCTTCCCTAAGCAGGCACTTAAGTGTGACAAATATAAGGGCCTTTGAGAGGGAAACCAACTaGAAGTTATCATATATACAT +
Preference number: 4 (lower is better)
Translates to: FTIPSLSRHLSVTNIRAFERETN*KLSYIH
Trigger: ATGTATATATGATAACTTGCAGTTGGTTTCCCTCTC...AAAGGCCCTTATATTTGTCACACTTAAGTGCCTGCTTAGGGAAGGTATTGTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR CCA 90 bp AAAGACTCCAAAAGAAATAGTTACTACTTCCAAATCAGCACACCCTGTAAAGTTCTTGGACACATTCCTTaGCTGCCAATAAATTCCACA +
Preference number: 4 (lower is better)
Translates to: KDSKRNSYYFQISTPCKVLGHIP*LPINST
Trigger: TGTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAG...AACTTTACAGGGTGTGCTGATTTGGAAGTAGTAACTATTTCTTTTGGAGTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR CCA 90 bp TTTCTAATACTTTTTCACAATACCTTCCCTAAGCAGGCACTTAAGTGTGACAAATTAGGTGAATGGGGGTaGTTTACTATATCAGTATGG +
Preference number: 4 (lower is better)
Translates to: FLILFHNTFPKQALKCDKLGEWG*FTISVW
Trigger: CCATACTGATATAGTAAACCACCCCCATTCACCTAA...TTTGTCACACTTAAGTGCCTGCTTAGGGAAGGTATTGTGAAAAAGTATTAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR CCA 90 bp AAGACTTACTTTCTCCATTCTGCTAATTGTCTCCCAATCTCCTTAAATGCACTTCAAATCAGATTTTACTaGTCTGCATGTATTGACTGG +
Preference number: 4 (lower is better)
Translates to: KTYFLHSANCLPISLNALQIRFY*SACIDW
Trigger: CCAGTCAATACATGCAGACCAGTAAAATCTGATTTG...AAGTGCATTTAAGGAGATTGGGAGACAATTAGCAGAATGGAGAAAGTAAGTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR TCA 90 bp TTTCTAATACTTTTTCACAATACCTTCCCTAAGCAGGCACTTAAGTGTGACAAAGTGGGTTGGAAACCTTaGATAAGAACAAAATTGCAA +
Preference number: 4 (lower is better)
Translates to: FLILFHNTFPKQALKCDKVGWKP*IRTKLQ
Trigger: TTGCAATTTTGTTCTTATTCAAGGTTTCCAACCCAC...TTTGTCACACTTAAGTGCCTGCTTAGGGAAGGTATTGTGAAAAAGTATTAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR CCA 90 bp AAGACTTACTTTCTCCATTCTGCTAATTGTCTCCCAATCTCCTTAAATGCACTTAACCACAGAATAAACTaGTTTGGAACCAGAAAAGTA +
Preference number: 4 (lower is better)
Translates to: KTYFLHSANCLPISLNALNHRIN*FGTRKV
Trigger: TACTTTTCTGGTTCCAAACCAGTTTATTCTGTGGTT...AAGTGCATTTAAGGAGATTGGGAGACAATTAGCAGAATGGAGAAAGTAAGTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR CCA 90 bp AAAGACTCCAAAAGAAATAGTTACTACTTCCAAATCAGCACACCCTGTAAAGTTCAAATCAGATTTTACTaGTCTGCATGTATTGACTGG +
Preference number: 4 (lower is better)
Translates to: KDSKRNSYYFQISTPCKVQIRFY*SACIDW
Trigger: CCAGTCAATACATGCAGACCAGTAAAATCTGATTTG...AACTTTACAGGGTGTGCTGATTTGGAAGTAGTAACTATTTCTTTTGGAGTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR GCA 90 bp AAAGACTCCAAAAGAAATAGTTACTACTTCCAAATCAGCACACCCTGTAAAGTTGAGAGGGAAACCAACTaGAAGTTATCATATATACAT +
Preference number: 4 (lower is better)
Translates to: KDSKRNSYYFQISTPCKVERETN*KLSYIH
Trigger: ATGTATATATGATAACTTGCAGTTGGTTTCCCTCTC...AACTTTACAGGGTGTGCTGATTTGGAAGTAGTAACTATTTCTTTTGGAGTCTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR CCA 90 bp AAAGACTCCAAAAGAAATAGTTACTACTTCCAAATCAGCACACCCTGTAAAGTTTTCTCTTCCTTAATTTaGCTTCTAAGGACAAAGGAT +
Preference number: 4 (lower is better)
Translates to: KDSKRNSYYFQISTPCKVFSSLI*LLRTKD
Trigger: ATCCTTTGTCCTTAGAAGCCAAATTAAGGAAGAGAA...AACTTTACAGGGTGTGCTGATTTGGAAGTAGTAACTATTTCTTTTGGAGTCTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS GCA 90 bp CCCGGGTCCGGGGGAATCAGCATGAAAGTGGTCCGCGTCGGGCGCTaGGCGGCGTCGTCCTGGCGCTGGGCCGCCGCCGCCGCCGCCTGC +
Preference number: 5 (lower is better)
Translates to: PGSGGISMKVVRVGR*AASSWRWAAAAAAC
Trigger: GCAGGCGGCGGCGGCGGCGGCCCAGCGCCAGGACGACGCCGCGCAGCGCCCGACGCGGACCACTTTCATGCTGATTCCCCCGGACCCGGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS TCA 90 bp CCCGCGGAGTGGCCGGAGCGCTGCCCGGGTCCGGGGGAATCAGCATaGAAGTGGTCCGCGTCGGGCGCTGCGCGGCGTCGTCCTGGCGCT +
Preference number: 5 (lower is better)
Translates to: PAEWPERCPGPGESA*KWSASGAARRRPGA
Trigger: AGCGCCAGGACGACGCCGCGCAGCGCCCGACGCGGACCACTTTCATGCTGATTCCCCCGGACCCGGGCAGCGCTCCGGCCACTCCGCGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS CCA 90 bp GAAGCCGGGAGAGGCAGGGAGCAGGCGGCCGGCACTAGCGGAGCCTaGGCAGGGCCTGTAAGGGCCGGGGAAAGCCGGCGAGGCTCGGGC +
Preference number: 5 (lower is better)
Translates to: EAGRGREQAAGTSGA*AGPVRAGESRRGSG
Trigger: GCCCGAGCCTCGCCGGCTTTCCCCGGCCCTTACAGGCCCTGCCCAGGCTCCGCTAGTGCCGGCCGCCTGCTCCCTGCCTCTCCCGGCTTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453270.2
CDS GCA 90 bp CGCTGCTGCCGCTGCTGCCGCCGCCGGAGCCGCTGCTGCTGCTGCTaGCGCCGCCGCCTCACACACATAGGGAAAGAGTCAACTCGCCGG +
Preference number: 5 (lower is better)
Translates to: RCCRCCRRRSRCCCC*RRRLTHIGKESTRR
Trigger: CCGGCGAGTTGACTCTTTCCCTATGTGTGTGAGGCGGCGGCGGCAGCAGCAGCAGCAGCGGCTCCGGCGGCGGCAGCAGCGGCAGCAGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS GCA 90 bp AGTCGCTGCTGCCGCTGCTGCCGCCGCCGGAGCCGCTGCTGCTGCTaGTGCCGCCGCCGCCTCACACACATAGGGAAAGAGTCAACTCGC +
Preference number: 5 (lower is better)
Translates to: SRCCRCCRRRSRCCC*CRRRLTHIGKESTR
Trigger: GCGAGTTGACTCTTTCCCTATGTGTGTGAGGCGGCGGCGGCAGCAGCAGCAGCAGCGGCTCCGGCGGCGGCAGCAGCGGCAGCAGCGACT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS CCA 90 bp CTCTCGTTCACTCTCGCTCTTAGAGCTGGTGTGCAGCCGAGGAGTTaGCGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: LSFTLALRAGVQPRS*RRRRRRRRRKRRWW
Trigger: CCACCACCTCCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCGCCAACTCCTCGGCTGCACACCAGCTCTAAGAGCGAGAGTGAACGAGAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS CCA 90 bp CGAGGACCCAGAATTGGCCACCTTGCCTCGGGGTCCCCGGCGCTGTaGGCGGGATGTAGCATTCTGAGGGCATCTTTCTTCTTTACTGCT +
Preference number: 5 (lower is better)
Translates to: RGPRIGHLASGSPAL*AGCSILRASFFFTA
Trigger: AGCAGTAAAGAAGAAAGATGCCCTCAGAATGCTACATCCCGCCCACAGCGCCGGGGACCCCGAGGCAAGGTGGCCAATTCTGGGTCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453270.2
CDS-3UTR CAA 90 bp ATTCAAAACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCCCGGCGCGCCGCCTTTaGTGTGTGCGAGGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: IQNLSMCLGHIPWLPINSPARRL*CVRGCK
Trigger: CTTGCACCCTCGCACACACAAAAGGCGGCGCGCCGG...GGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTTTTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR CAA 90 bp AAGACTTACTTTCTCCATTCTGCTAATTGTCTCCCAATCTCCTTAAATGCACTTGCTGGCTGGGCCCCCTaGGCCGGGCGTCTGTGGCGT +
Preference number: 5 (lower is better)
Translates to: KTYFLHSANCLPISLNALAGWAP*AGRLWR
Trigger: ACGCCACAGACGCCCGGCCAAGGGGGCCCAGCCAGC...AAGTGCATTTAAGGAGATTGGGAGACAATTAGCAGAATGGAGAAAGTAAGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR CAA 90 bp TTCACAATACCTTCCCTAAGCAGGCACTTAAGTGTGACAAATATAAGGGCCTTTTGCTGCTGCTGCTGCTaGTCGCTACCCGGGCCGCCA +
Preference number: 5 (lower is better)
Translates to: FTIPSLSRHLSVTNIRAFCCCCC*SLPGPP
Trigger: TGGCGGCCCGGGTAGCGACAAGCAGCAGCAGCAGCA...AAAGGCCCTTATATTTGTCACACTTAAGTGCCTGCTTAGGGAAGGTATTGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR CAA 90 bp ATTCAAAACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCTTGAGGGGATCCCCGTaGGTCAGCGCGAACTGCCCG +
Preference number: 5 (lower is better)
Translates to: IQNLSMCLGHIPWLPINSLRGSP*VSANCP
Trigger: CGGGCAGTTCGCGCTGACCAACGGGGATCCCCTCAA...GGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTTTTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS CCA 90 bp CCACCTCAAGGAAGTGCTTCCCCATGTATTAGGCTCTCTCAGCCTTaGAAAACCCTGCACACTAACTTTAGAGAGACAAGGTTTCAGGGA +
Preference number: 5 (lower is better)
Translates to: PPQGSASPCIRLSQP*KTLHTNFRETRFQG
Trigger: TCCCTGAAACCTTGTCTCTCTAAAGTTAGTGTGCAGGGTTTTCCAAGGCTGAGAGAGCCTAATACATGGGGAAGCACTTCCTTGAGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421109.6
CDS-3UTR CAA 90 bp AAGACTTACTTTCTCCATTCTGCTAATTGTCTCCCAATCTCCTTAAATGCACTTTTGAGGGGATCCCCGTaGGTCAGCGCGAACTGCCCG +
Preference number: 5 (lower is better)
Translates to: KTYFLHSANCLPISLNALLRGSP*VSANCP
Trigger: CGGGCAGTTCGCGCTGACCAACGGGGATCCCCTCAA...AAGTGCATTTAAGGAGATTGGGAGACAATTAGCAGAATGGAGAAAGTAAGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR CAA 90 bp TTCACAATACCTTCCCTAAGCAGGCACTTAAGTGTGACAAATATAAGGGCCTTTCACGCACTCGATGTGTaGCTGCTGCTGCTGCTTGTC +
Preference number: 5 (lower is better)
Translates to: FTIPSLSRHLSVTNIRAFHALDV*LLLLLV
Trigger: GACAAGCAGCAGCAGCAGCAACACATCGAGTGCGTG...AAAGGCCCTTATATTTGTCACACTTAAGTGCCTGCTTAGGGAAGGTATTGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS GCA 90 bp GAAGTGCTTCCCCATGTATTAGGCTCTCTCAGCCTTGGAAAACCCTaGACACTAACTTTAGAGAGACAAGGTTTCAGGGAGCTTTGTACA +
Preference number: 5 (lower is better)
Translates to: EVLPHVLGSLSLGKP*TLTLERQGFRELCT
Trigger: TGTACAAAGCTCCCTGAAACCTTGTCTCTCTAAAGTTAGTGTGCAGGGTTTTCCAAGGCTGAGAGAGCCTAATACATGGGGAAGCACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421109.6
CDS GCA 90 bp TGCACCGCAAAACCATATTTGCCTTGTTCAAGGTCCCAAACCGCTTaGATCTTCCTCCTAAACTGGAATAACTCTCCTTTAGTTTGGCGG +
Preference number: 5 (lower is better)
Translates to: CTAKPYLPCSRSQTA*IFLLNWNNSPLVWR
Trigger: CCGCCAAACTAAAGGAGAGTTATTCCAGTTTAGGAGGAAGATGCAAGCGGTTTGGGACCTTGAACAAGGCAAATATGGTTTTGCGGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421109.6
CDS-3UTR CAA 90 bp AACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCACAGTTCTTCTCCACTTGCTCTaGGAAGATCCGTATGTGGTC +
Preference number: 5 (lower is better)
Translates to: NLSMCLGHIPWLPINSTVLLHLL*EDPYVV
Trigger: GACCACATACGGATCTTCCAAGAGCAAGTGGAGAAG...AACTGTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR CAA 90 bp AACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCACAGTTAAGGTCCCAAACCGCTaGCATCTTCCTCCTAAACTG +
Preference number: 5 (lower is better)
Translates to: NLSMCLGHIPWLPINSTVKVPNR*HLPPKL
Trigger: CAGTTTAGGAGGAAGATGCAAGCGGTTTGGGACCTT...AACTGTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421109.6
CDS-3UTR CAA 90 bp ATTCAAAACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCCTTCTCCACTTGCTCTaGGAAGATCCGTATGTGGTC +
Preference number: 5 (lower is better)
Translates to: IQNLSMCLGHIPWLPINSLLHLL*EDPYVV
Trigger: GACCACATACGGATCTTCCAAGAGCAAGTGGAGAAG...GGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTTTTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR CAA 90 bp ATTCAAAACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCTCTGGCCCGGTGTGTTaGTTTTGTTTGTTTCTCTCG +
Preference number: 5 (lower is better)
Translates to: IQNLSMCLGHIPWLPINSSGPVC*FCLFLS
Trigger: CGAGAGAAACAAACAAAACAAACACACCGGGCCAGA...GGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTTTTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR CAA 90 bp ATTCAAAACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCTGCTTTTGCAAAGTTTaGTCGATGGCTTGTCTGGCC +
Preference number: 5 (lower is better)
Translates to: IQNLSMCLGHIPWLPINSCFCKV*SMACLA
Trigger: GGCCAGACAAGCCATCGACAAAACTTTGCAAAAGCA...GGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTTTTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR CAA 90 bp AGTCAGATGGAGAACTCTGCACAAATCAGATTTTACTGGTCTGCATGTATTGACCTTCTCCACTTGCTCTaGGAAGATCCGTATGTGGTC +
Preference number: 5 (lower is better)
Translates to: SQMENSAQIRFYWSACIDLLHLL*EDPYVV
Trigger: GACCACATACGGATCTTCCAAGAGCAAGTGGAGAAG...GTCAATACATGCAGACCAGTAAAATCTGATTTGTGCAGAGTTCTCCATCTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR CAA 90 bp AACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCACAGTTTCTTGGACACATTCCTaGGCTGCCAATAAATTCCAC +
Preference number: 5 (lower is better)
Translates to: NLSMCLGHIPWLPINSTVSWTHS*AANKFH
Trigger: GTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAGA...AACTGTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR CAA 90 bp ATTCAAAACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCATGGAAAAGATTCCCTaGACCCTGTGGTCATGCTCT +
Preference number: 5 (lower is better)
Translates to: IQNLSMCLGHIPWLPINSMEKIP*TLWSCS
Trigger: AGAGCATGACCACAGGGTCAAGGGAATCTTTTCCAT...GGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTTTTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR CAA 90 bp AACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCACAGTTACCGCAAAACCATATTaGCCTTGTTCAAGGTCCCAA +
Preference number: 5 (lower is better)
Translates to: NLSMCLGHIPWLPINSTVTAKPY*PCSRSQ
Trigger: TTGGGACCTTGAACAAGGCAAATATGGTTTTGCGGT...AACTGTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421109.6
CDS-3UTR CAA 90 bp ATTCAAAACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCAAAACCATATTTGCCTaGTTCAAGGTCCCAAACCGC +
Preference number: 5 (lower is better)
Translates to: IQNLSMCLGHIPWLPINSKTIFA*FKVPNR
Trigger: GCGGTTTGGGACCTTGAACAAGGCAAATATGGTTTT...GGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTTTTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421109.6
CDS TCA 90 bp CTCTCCTTTAGTTTGGCGGGTGAAATAAATGCTTTGTTGGCCCCCTaGAAAGATGTGTCTTTGATAATTAAAGAGAATCTCCTCCTCGGT +
Preference number: 5 (lower is better)
Translates to: LSFSLAGEINALLAP*KDVSLIIKENLLLG
Trigger: ACCGAGGAGGAGATTCTCTTTAATTATCAAAGACACATCTTTTCAGGGGGCCAACAAAGCATTTATTTCACCCGCCAAACTAAAGGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421109.6
CDS-3UTR CAA 90 bp AAAGACTCCAAAAGAAATAGTTACTACTTCCAAATCAGCACACCCTGTAAAGTTAGTTTTGTCGATGGCTaGTCTGGCCCGGTGTGTTTG +
Preference number: 5 (lower is better)
Translates to: KDSKRNSYYFQISTPCKVSFVDG*SGPVCL
Trigger: CAAACACACCGGGCCAGACAAGCCATCGACAAAACT...AACTTTACAGGGTGTGCTGATTTGGAAGTAGTAACTATTTCTTTTGGAGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR CAA 90 bp AAAGACTCCAAAAGAAATAGTTACTACTTCCAAATCAGCACACCCTGTAAAGTTTCGGGGGCTGGTTGGTaGAGGTTGGTTAGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: KDSKRNSYYFQISTPCKVSGAGW*RLVSFS
Trigger: GGAAAAACTAACCAACCTCAACCAACCAGCCCCCGA...AACTTTACAGGGTGTGCTGATTTGGAAGTAGTAACTATTTCTTTTGGAGTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR CAA 90 bp AGTCAGATGGAGAACTCTGCACAAATCAGATTTTACTGGTCTGCATGTATTGACTCTTGGACACATTCCTaGGCTGCCAATAAATTCCAC +
Preference number: 5 (lower is better)
Translates to: SQMENSAQIRFYWSACIDSWTHS*AANKFH
Trigger: GTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAGA...GTCAATACATGCAGACCAGTAAAATCTGATTTGTGCAGAGTTCTCCATCTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR CAA 90 bp ATTCAAAACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCCTTCACCTAAAAATTTaGGTCACCACTTGTAAGTGC +
Preference number: 5 (lower is better)
Translates to: IQNLSMCLGHIPWLPINSLHLKI*VTTCKC
Trigger: GCACTTACAAGTGGTGACCAAAATTTTTAGGTGAAG...GGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTTTTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394166.8
ENST00000394171.6
ENST00000421109.6
CDS-3UTR CAA 90 bp ATTCAAAACCTCAGCATGTGTCTTGGACACATTCCTTGGCTGCCAATAAATTCCCCTGTATCACTGAATTaGAAACTCTCTCAACAACCA +
Preference number: 5 (lower is better)
Translates to: IQNLSMCLGHIPWLPINSPVSLN*KLSQQP
Trigger: TGGTTGTTGAGAGAGTTTCAAATTCAGTGATACAGG...GGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGGTTTTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR CAA 90 bp AAGACTTACTTTCTCCATTCTGCTAATTGTCTCCCAATCTCCTTAAATGCACTTATGGAAAAGATTCCCTaGACCCTGTGGTCATGCTCT +
Preference number: 5 (lower is better)
Translates to: KTYFLHSANCLPISLNALMEKIP*TLWSCS
Trigger: AGAGCATGACCACAGGGTCAAGGGAATCTTTTCCAT...AAGTGCATTTAAGGAGATTGGGAGACAATTAGCAGAATGGAGAAAGTAAGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR CAA 90 bp AAAGACTCCAAAAGAAATAGTTACTACTTCCAAATCAGCACACCCTGTAAAGTTCCCGGTGTGTTTGTTTaGTTTGTTTCTCTCGGCTCA +
Preference number: 5 (lower is better)
Translates to: KDSKRNSYYFQISTPCKVPGVFV*FVSLGS
Trigger: TGAGCCGAGAGAAACAAACAAAACAAACACACCGGG...AACTTTACAGGGTGTGCTGATTTGGAAGTAGTAACTATTTCTTTTGGAGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS-3UTR CAA 90 bp AAAGACTCCAAAAGAAATAGTTACTACTTCCAAATCAGCACACCCTGTAAAGTTTACAGTAGTCCACCTTaGAACAAACTGACTGAGGGG +
Preference number: 5 (lower is better)
Translates to: KDSKRNSYYFQISTPCKVYSSPP*NKLTEG
Trigger: CCCCTCAGTCAGTTTGTTCAAAGGTGGACTACTGTA...AACTTTACAGGGTGTGCTGATTTGGAAGTAGTAACTATTTCTTTTGGAGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS-3UTR CAA 90 bp TTCACAATACCTTCCCTAAGCAGGCACTTAAGTGTGACAAATATAAGGGCCTTTTTTCTCTTCCTTAATTaGGCTTCTAAGGACAAAGGA +
Preference number: 5 (lower is better)
Translates to: FTIPSLSRHLSVTNIRAFFLFLN*ASKDKG
Trigger: TCCTTTGTCCTTAGAAGCCAAATTAAGGAAGAGAAA...AAAGGCCCTTATATTTGTCACACTTAAGTGCCTGCTTAGGGAAGGTATTGTGAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000394166.8
ENST00000394171.6
CDS CCA 72 bp CTGGCCACCGGCCGCCGTCTGGGCTGGCGTGCTGGCTaGGCCCCCTTGGCCGGGCGTCTGTGGCGTGTGCGG +
Preference number: 6 (lower is better)
Translates to: LATGRRLGWRAG*APLAGRLWRVR
Trigger: CCGCACACGCCACAGACGCCCGGCCAAGGGGGCCCAGCCAGCACGCCAGCCCAGACGGCGGCCGGTGGCCAG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS GCA 72 bp CGGGCTCCGGCGCGCCGCCTTTTGTGTGTGCGAGGGTaGAAGAGGGCGCGGGAGGGCGCCCCGGGTGGCTCG +
Preference number: 6 (lower is better)
Translates to: RAPARRLLCVRG*KRAREGAPGGS
Trigger: CGAGCCACCCGGGGCGCCCTCCCGCGCCCTCTTGCACCCTCGCACACACAAAAGGCGGCGCGCCGGAGCCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS GCA 72 bp CCGGGTCTCGGGCTCCGGCGCGCCGCCTTTTGTGTGTaGGAGGGTGCAAGAGGGCGCGGGAGGGCGCCCCGG +
Preference number: 6 (lower is better)
Translates to: PGLGLRRAAFCV*EGARGRGRAPR
Trigger: CCGGGGCGCCCTCCCGCGCCCTCTTGCACCCTCGCACACACAAAAGGCGGCGCGCCGGAGCCCGAGACCCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS GCA 72 bp GGGGGAATCAGCATGAAAGTGGTCCGCGTCGGGCGCTaGGCGGCGTCGTCCTGGCGCTGGGCCGCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: GGISMKVVRVGR*AASSWRWAAAA
Trigger: GGCGGCGGCGGCCCAGCGCCAGGACGACGCCGCGCAGCGCCCGACGCGGACCACTTTCATGCTGATTCCCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS CAA 72 bp CGGCTCCCCGGGTCTCGGGCTCCGGCGCGCCGCCTTTaGTGTGTGCGAGGGTGCAAGAGGGCGCGGGAGGGC +
Preference number: 6 (lower is better)
Translates to: RLPGSRAPARRL*CVRGCKRAREG
Trigger: GCCCTCCCGCGCCCTCTTGCACCCTCGCACACACAAAAGGCGGCGCGCCGGAGCCCGAGACCCGGGGAGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS TCA 72 bp TGGCCGGAGCGCTGCCCGGGTCCGGGGGAATCAGCATaGAAGTGGTCCGCGTCGGGCGCTGCGCGGCGTCGT +
Preference number: 6 (lower is better)
Translates to: WPERCPGPGESA*KWSASGAARRR
Trigger: ACGACGCCGCGCAGCGCCCGACGCGGACCACTTTCATGCTGATTCCCCCGGACCCGGGCAGCGCTCCGGCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS GCA 72 bp TGCCGCTGCTGCCGCCGCCGGAGCCGCTGCTGCTGCTaGTGCCGCCGCCGCCTCACACACATAGGGAAAGAG +
Preference number: 6 (lower is better)
Translates to: CRCCRRRSRCCC*CRRRLTHIGKE
Trigger: CTCTTTCCCTATGTGTGTGAGGCGGCGGCGGCAGCAGCAGCAGCAGCGGCTCCGGCGGCGGCAGCAGCGGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS CCA 72 bp CTGCCCCTCTGCACCGCTCCGAGGCCCGCTCGGGGCTaGTCCGCCGAGGACCCAGAATTGGCCACCTTGCCT +
Preference number: 6 (lower is better)
Translates to: LPLCTAPRPARG*SAEDPELATLP
Trigger: AGGCAAGGTGGCCAATTCTGGGTCCTCGGCGGACCAGCCCCGAGCGGGCCTCGGAGCGGTGCAGAGGGGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453270.2
CDS GCA 72 bp CGCTGCTGCCGCCGCCGGAGCCGCTGCTGCTGCTGCTaGCGCCGCCGCCTCACACACATAGGGAAAGAGTCA +
Preference number: 6 (lower is better)
Translates to: RCCRRRSRCCCC*RRRLTHIGKES
Trigger: TGACTCTTTCCCTATGTGTGTGAGGCGGCGGCGGCAGCAGCAGCAGCAGCGGCTCCGGCGGCGGCAGCAGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS GCA 72 bp CGAACTGCCCGTGGGTCGGCTGGGTCGGCGGCATCCTaGCCCTCTGCACCGCCAGAGCAGGCTAGCCAAACG +
Preference number: 6 (lower is better)
Translates to: RTARGSAGSAAS*PSAPPEQASQT
Trigger: CGTTTGGCTAGCCTGCTCTGGCGGTGCAGAGGGGCAGGATGCCGCCGACCCAGCCGACCCACGGGCAGTTCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394171.6
ENST00000559679.1
CDS TCA 72 bp GGGAAAGCCGGCGAGGCTCGGGCCCAGGCTGTTATCTaGCTCCGGACCGGGAGAGTCGCTCTCGCAGAAACA +
Preference number: 6 (lower is better)
Translates to: GKAGEARAQAVI*LRTGRVALAET
Trigger: TGTTTCTGCGAGAGCGACTCTCCCGGTCCGGAGTCAGATAACAGCCTGGGCCCGAGCCTCGCCGGCTTTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453270.2
CDS GCA 72 bp CTCGTCCTGGGGGTCGCGCCACGTGCTGACTACCATTaGCATATCTATGGGGGCTGCGTCCGGACTTCCTGC +
Preference number: 6 (lower is better)
Translates to: LVLGVAPRADYH*HIYGGCVRTSC
Trigger: GCAGGAAGTCCGGACGCAGCCCCCATAGATATGGCAATGGTAGTCAGCACGTGGCGCGACCCCCAGGACGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS GCA 72 bp CGAACTGCCCGTGGGTCGGCTGGGTCGGCGGCATCCTaGCCCTCTGCACCGCAAAACCATATTTGCCTTGTT +
Preference number: 6 (lower is better)
Translates to: RTARGSAGSAAS*PSAPQNHICLV
Trigger: AACAAGGCAAATATGGTTTTGCGGTGCAGAGGGGCAGGATGCCGCCGACCCAGCCGACCCACGGGCAGTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421109.6
CDS CCA 72 bp ACTCTCGCTCTTAGAGCTGGTGTGCAGCCGAGGAGTTaGCGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGG +
Preference number: 6 (lower is better)
Translates to: TLALRAGVQPRS*RRRRRRRRRKR
Trigger: CCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCGCCAACTCCTCGGCTGCACACCAGCTCTAAGAGCGAGAGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS CAA 72 bp GTCGATGGCTTGTCTGGCCCGGTGTGTTTGTTTTGTTaGTTTCTCTCGGCTCAGCTTTGTTGGTTTCGGGGG +
Preference number: 6 (lower is better)
Translates to: VDGLSGPVCLFC*FLSAQLCWFRG
Trigger: CCCCCGAAACCAACAAAGCTGAGCCGAGAGAAACAAACAAAACAAACACACCGGGCCAGACAAGCCATCGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS CAA 72 bp CATCCTGCCCCTCTGCACCGCAAAACCATATTTGCCTaGTTCAAGGTCCCAAACCGCTTGCATCTTCCTCCT +
Preference number: 6 (lower is better)
Translates to: HPAPLHRKTIFA*FKVPNRLHLPP
Trigger: AGGAGGAAGATGCAAGCGGTTTGGGACCTTGAACAAGGCAAATATGGTTTTGCGGTGCAGAGGGGCAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421109.6
CDS GCA 72 bp CCCCATGTATTAGGCTCTCTCAGCCTTGGAAAACCCTaGACACTAACTTTAGAGAGACAAGGTTTCAGGGAG +
Preference number: 6 (lower is better)
Translates to: PHVLGSLSLGKP*TLTLERQGFRE
Trigger: CTCCCTGAAACCTTGTCTCTCTAAAGTTAGTGTGCAGGGTTTTCCAAGGCTGAGAGAGCCTAATACATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421109.6
CDS CCA 72 bp GGAAGTGCTTCCCCATGTATTAGGCTCTCTCAGCCTTaGAAAACCCTGCACACTAACTTTAGAGAGACAAGG +
Preference number: 6 (lower is better)
Translates to: GSASPCIRLSQP*KTLHTNFRETR
Trigger: CCTTGTCTCTCTAAAGTTAGTGTGCAGGGTTTTCCAAGGCTGAGAGAGCCTAATACATGGGGAAGCACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421109.6
CDS CAA 72 bp CAAAGTTTTGTCGATGGCTTGTCTGGCCCGGTGTGTTaGTTTTGTTTGTTTCTCTCGGCTCAGCTTTGTTGG +
Preference number: 6 (lower is better)
Translates to: QSFVDGLSGPVC*FCLFLSAQLCW
Trigger: CCAACAAAGCTGAGCCGAGAGAAACAAACAAAACAAACACACCGGGCCAGACAAGCCATCGACAAAACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394166.8
CDS GCA 72 bp AAACCATATTTGCCTTGTTCAAGGTCCCAAACCGCTTaGATCTTCCTCCTAAACTGGAATAACTCTCCTTTA +
Preference number: 6 (lower is better)
Translates to: KPYLPCSRSQTA*IFLLNWNNSPL
Trigger: TAAAGGAGAGTTATTCCAGTTTAGGAGGAAGATGCAAGCGGTTTGGGACCTTGAACAAGGCAAATATGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421109.6