Pregenerated sensors for NR2C2AP (Homo sapiens)
Ensembl gene IDs: ENSG00000184162Ensembl transcript IDs: ENST00000331552.12, ENST00000420605.7, ENST00000537399.1, ENST00000538165.2, ENST00000539678.1, ENST00000539693.1, ENST00000544883.5
Found 161 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTGAGTCCTCGGTTCTCCCAGCTTTGCTCTGTAATGCAGGTCTCTaGAAGGGTCCCTGTTTGTCCCCTAAGGGGAGAGCGCAGGTTGGC | + |
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Preference number: 1 (lower is better) Translates to: GESSVLPALLCNAGL*KGPCLSPKGRAQVG Trigger: GCCAACCTGCGCTCTCCCCTTAGGGGACAAACAGGGACCCTTGCAGAGACCTGCATTACAGAGCAAAGCTGGGAGAACCGAGGACTCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| 3UTR GCA 90 bp | GCCTCCACCCCACTCCCGATTCAAGCTCACAGCCCACCTTTTCCCTaGCCCATCTCAGTGCAACAGGTGATCGAGAACCACATCCTCAAG | + |
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Preference number: 1 (lower is better) Translates to: ASTPLPIQAHSPPFP*PISVQQVIENHILK Trigger: CTTGAGGATGTGGTTCTCGATCACCTGTTGCACTGAGATGGGGCAGGGAAAAGGTGGGCTGTGAGCTTGAATCGGGAGTGGGGTGGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| 3UTR TCA 90 bp | AAGCTCACAGCCCACCTTTTCCCTGCCCCATCTCAGTGCAACAGGTaGTCGAGAACCACATCCTCAAGCTCTTCCAGAGCAACCTGGTGC | + |
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Preference number: 1 (lower is better) Translates to: KLTAHLFPAPSQCNR*SRTTSSSSSRATWC Trigger: GCACCAGGTTGCTCTGGAAGAGCTTGAGGATGTGGTTCTCGATCACCTGTTGCACTGAGATGGGGCAGGGAAAAGGTGGGCTGTGAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| 3UTR CCA 90 bp | TGCCGGGGACTCAGACACTCAGGGAACAAAATGGTCAGCCAGAGCTaGGGAAACCCAGAACTGACTTCAAAGGCAGCTTCTGGACAGGTG | + |
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Preference number: 1 (lower is better) Translates to: CRGLRHSGNKMVSQS*GNPELTSKAASGQV Trigger: CACCTGTCCAGAAGCTGCCTTTGAAGTCAGTTCTGGGTTTCCCCAGCTCTGGCTGACCATTTTGTTCCCTGAGTGTCTGAGTCCCCGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| 3UTR CCA 90 bp | GAGGTCACGTGTTCAAGATCACACATCAGGGTTCCCATTCGGGTTTaGGTGAGTCCAAAGCTTCCAGAGGCACAGACCACCCACCCCAGA | + |
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Preference number: 1 (lower is better) Translates to: EVTCSRSHIRVPIRV*VSPKLPEAQTTHPR Trigger: TCTGGGGTGGGTGGTCTGTGCCTCTGGAAGCTTTGGACTCACCCAAACCCGAATGGGAACCCTGATGTGTGATCTTGAACACGTGACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539678.1 |
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| 3UTR TCA 90 bp | TCACGTGTTCAAGATCACACATCAGGGTTCCCATTCGGGTTTGGGTaGGTCCAAAGCTTCCAGAGGCACAGACCACCCACCCCAGAAGCA | + |
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Preference number: 1 (lower is better) Translates to: SRVQDHTSGFPFGFG*VQSFQRHRPPTPEA Trigger: TGCTTCTGGGGTGGGTGGTCTGTGCCTCTGGAAGCTTTGGACTCACCCAAACCCGAATGGGAACCCTGATGTGTGATCTTGAACACGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539678.1 |
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| 3UTR CCA 90 bp | TCTCACACAGAACAGGTGGTCATCAGCACCATTTTACAGAAAAAGTaGAGTCCTAGAGGTCACGTGTTCAAGATCACACATCAGGGTTCC | + |
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Preference number: 1 (lower is better) Translates to: SHTEQVVISTILQKK*SPRGHVFKITHQGS Trigger: GGAACCCTGATGTGTGATCTTGAACACGTGACCTCTAGGACTCCACTTTTTCTGTAAAATGGTGCTGATGACCACCTGTTCTGTGTGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000539678.1 |
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| 3UTR CAA 90 bp | CTCCCAGCTTTGCTCTGTAATGCAGGTCTCTGCAAGGGTCCCTGTTaGTCCCCTAAGGGGAGAGCGCAGGTTGGCCTGTGCCTCCACCCC | + |
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Preference number: 2 (lower is better) Translates to: LPALLCNAGLCKGPC*SPKGRAQVGLCLHP Trigger: GGGGTGGAGGCACAGGCCAACCTGCGCTCTCCCCTTAGGGGACAAACAGGGACCCTTGCAGAGACCTGCATTACAGAGCAAAGCTGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| 3UTR-3UTR GCA 90 bp | TCTTCCAGAGCAACCTGGTGCCCGCTGACCCTGAGTGAAGGCCGCCTGCCGGGGCCAATAAACCTTCTGTaGAGAATGAGGGACTTTGCT | + |
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Preference number: 2 (lower is better) Translates to: SSRATWCPLTLSEGRLPGPINLL*RMRDFA Trigger: AGCAAAGTCCCTCATTCTGCACAGAAGGTTTATTGG...CCCCGGCAGGCGGCCTTCACTCAGGGTCAGCGGGCACCAGGTTGCTCTGGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| 3UTR-3UTR GCA 90 bp | CCTGGGGTGAGTCCTCGGTTCTCCCAGCTTTGCTCTGTAATGCAGGTCTCTGCATCCAGAGCAACCTGGTaGCCGCTGACCCTGAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: PGVSPRFSQLCSVMQVSASRATW*PLTLSE Trigger: TTCACTCAGGGTCAGCGGGCACCAGGTTGCTCTGGA...TGCAGAGACCTGCATTACAGAGCAAAGCTGGGAGAACCGAGGACTCACCCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| 3UTR-3UTR CCA 90 bp | GTAATGCAGGTCTCTGCAAGGGTCCCTGTTTGTCCCCTAAGGGGAGAGCGCAGGTTCAAAGGCAGCTTCTaGACAGGTGGTGGGAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: VMQVSARVPVCPLRGERRFKGSF*TGGGRG Trigger: TCCCCTCCCACCACCTGTCCAGAAGCTGCCTTTGAA...CCTGCGCTCTCCCCTTAGGGGACAAACAGGGACCCTTGCAGAGACCTGCATTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| 3UTR-3UTR CCA 90 bp | CCTGGGGTGAGTCCTCGGTTCTCCCAGCTTTGCTCTGTAATGCAGGTCTCTGCATCTTCCAGAGCAACCTaGTGCCCGCTGACCCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: PGVSPRFSQLCSVMQVSASSRAT*CPLTLS Trigger: ACTCAGGGTCAGCGGGCACCAGGTTGCTCTGGAAGA...TGCAGAGACCTGCATTACAGAGCAAAGCTGGGAGAACCGAGGACTCACCCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| 3UTR-3UTR GCA 90 bp | CACTCCCGATTCAAGCTCACAGCCCACCTTTTCCCTGCCCCATCTCAGTGCAACCAGAATGAGGGACTTTaGTGTGCTTCCCGGAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: HSRFKLTAHLFPAPSQCNQNEGL*CASRRA Trigger: AGCCCTCCGGGAAGCACAGCAAAGTCCCTCATTCTG...GTTGCACTGAGATGGGGCAGGGAAAAGGTGGGCTGTGAGCTTGAATCGGGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| 3UTR CAA 90 bp | AGAGGTCACGTGTTCAAGATCACACATCAGGGTTCCCATTCGGGTTaGGGTGAGTCCAAAGCTTCCAGAGGCACAGACCACCCACCCCAG | + |
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Preference number: 2 (lower is better) Translates to: RGHVFKITHQGSHSG*GESKASRGTDHPPQ Trigger: CTGGGGTGGGTGGTCTGTGCCTCTGGAAGCTTTGGACTCACCCAAACCCGAATGGGAACCCTGATGTGTGATCTTGAACACGTGACCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539678.1 |
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| 3UTR-3UTR CCA 90 bp | TTTACAAACTTAGGGGAAGTTGAGGTTCCTGGGGTGAGTCCTCGGTTCTCCCAGCTTCTGGACAGGTGGTaGGAGGGGACCCTTCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: FTNLGEVEVPGVSPRFSQLLDRW*EGTLPK Trigger: CTTGGGAAGGGTCCCCTCCCACCACCTGTCCAGAAG...CTGGGAGAACCGAGGACTCACCCCAGGAACCTCAACTTCCCCTAAGTTTGTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| 3UTR-3UTR CCA 90 bp | GAACAAAATGGTCAGCCAGAGCTGGGGAAACCCAGAACTGACTTCAAAGGCAGCCTTCTGGACAGGTGGTaGGAGGGGACCCTTCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: EQNGQPELGKPRTDFKGSLLDRW*EGTLPK Trigger: CTTGGGAAGGGTCCCCTCCCACCACCTGTCCAGAAG...GCTGCCTTTGAAGTCAGTTCTGGGTTTCCCCAGCTCTGGCTGACCATTTTGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| 3UTR-3UTR CCA 90 bp | AATGGTCAGCCAGAGCTGGGGAAACCCAGAACTGACTTCAAAGGCAGCTTCTGGTCTTCCAGAGCAACCTaGTGCCCGCTGACCCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: NGQPELGKPRTDFKGSFWSSRAT*CPLTLS Trigger: ACTCAGGGTCAGCGGGCACCAGGTTGCTCTGGAAGA...CCAGAAGCTGCCTTTGAAGTCAGTTCTGGGTTTCCCCAGCTCTGGCTGACCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| 3UTR-3UTR TCA 90 bp | GAGCTGGGGAAACCCAGAACTGACTTCAAAGGCAGCTTCTGGACAGGTGGTGGGACCTTCTGTGCAGAATaGGGGACTTTGCTGTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: ELGKPRTDFKGSFWTGGGTFCAE*GTLLCF Trigger: GAAGCACAGCAAAGTCCCTCATTCTGCACAGAAGGT...CCCACCACCTGTCCAGAAGCTGCCTTTGAAGTCAGTTCTGGGTTTCCCCAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| 3UTR-3UTR TCA 90 bp | AACCTGGGGAAGCTGCAGGTCCCTCTAAGCCTCTCACACAGAACAGGTGGTCATCAGGGGCAGGATATCTaGAGCGAGTTGTTGTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: NLGKLQVPLSLSHRTGGHQGQDI*SELLSS Trigger: TGAGGACAACAACTCGCTTCAGATATCCTGCCCCTG...ATGACCACCTGTTCTGTGTGAGAGGCTTAGAGGGACCTGCAGCTTCCCCAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000539678.1 |
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| 3UTR-3UTR GCA 90 bp | TGGCCTGTGCCTCCACCCCACTCCCGATTCAAGCTCACAGCCCACCTTTTCCCTCCAATAAACCTTCTGTaGAGAATGAGGGACTTTGCT | + |
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Preference number: 2 (lower is better) Translates to: WPVPPPHSRFKLTAHLFPPINLL*RMRDFA Trigger: AGCAAAGTCCCTCATTCTGCACAGAAGGTTTATTGG...AGGGAAAAGGTGGGCTGTGAGCTTGAATCGGGAGTGGGGTGGAGGCACAGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| 3UTR-3UTR CCA 90 bp | TTCCCAAGAGGAACCAATAAACCTTCTGTGCAGAATGAGGGACTTTGCTGTGCTCAGCTTCTGGACAGGTaGTGGGAGGGGACCCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: FPRGTNKPSVQNEGLCCAQLLDR*WEGTLP Trigger: GGGAAGGGTCCCCTCCCACCACCTGTCCAGAAGCTG...AGCACAGCAAAGTCCCTCATTCTGCACAGAAGGTTTATTGGTTCCTCTTGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| 3UTR-3UTR CCA 90 bp | AATGGTCAGCCAGAGCTGGGGAAACCCAGAACTGACTTCAAAGGCAGCTTCTGGATGGTCAGCCAGAGCTaGGGAAACCCAGAACTGACT | + |
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Preference number: 2 (lower is better) Translates to: NGQPELGKPRTDFKGSFWMVSQS*GNPELT Trigger: AGTCAGTTCTGGGTTTCCCCAGCTCTGGCTGACCAT...CCAGAAGCTGCCTTTGAAGTCAGTTCTGGGTTTCCCCAGCTCTGGCTGACCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| 3UTR-3UTR CCA 90 bp | CAGCCCACCTTTTCCCTGCCCCATCTCAGTGCAACAGGTGATCGAGAACCACATACTCAGGGAACAAAATaGTCAGCCAGAGCTGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: QPTFSLPHLSATGDREPHTQGTK*SARAGE Trigger: TTCCCCAGCTCTGGCTGACCATTTTGTTCCCTGAGT...ATGTGGTTCTCGATCACCTGTTGCACTGAGATGGGGCAGGGAAAAGGTGGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| 3UTR-3UTR CCA 90 bp | GTCAGCCAGAGCTGGGGAAACCCAGAACTGACTTCAAAGGCAGCTTCTGGACAGCTTCAGCAGCTGGTATaGGGAAAGTCTGAAGCGAGT | + |
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Preference number: 2 (lower is better) Translates to: VSQSWGNPELTSKAASGQLQQLV*GKSEAS Trigger: ACTCGCTTCAGACTTTCCCCATACCAGCTGCTGAAG...CTGTCCAGAAGCTGCCTTTGAAGTCAGTTCTGGGTTTCCCCAGCTCTGGCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544883.5 |
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| 3UTR-3UTR TCA 90 bp | GAACAAAATGGTCAGCCAGAGCTGGGGAAACCCAGAACTGACTTCAAAGGCAGCACCTTCTGTGCAGAATaGGGGACTTTGCTGTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: EQNGQPELGKPRTDFKGSTFCAE*GTLLCF Trigger: GAAGCACAGCAAAGTCCCTCATTCTGCACAGAAGGT...GCTGCCTTTGAAGTCAGTTCTGGGTTTCCCCAGCTCTGGCTGACCATTTTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| 3UTR-3UTR GCA 90 bp | TTCCCAAGAGGAACCAATAAACCTTCTGTGCAGAATGAGGGACTTTGCTGTGCTCAGAATGAGGGACTTTaGTGTGCTTCCCGGAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: FPRGTNKPSVQNEGLCCAQNEGL*CASRRA Trigger: AGCCCTCCGGGAAGCACAGCAAAGTCCCTCATTCTG...AGCACAGCAAAGTCCCTCATTCTGCACAGAAGGTTTATTGGTTCCTCTTGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| 3UTR-3UTR CCA 90 bp | TCCCAAGAGGAACCAATAAACCTTCTGTGCAGAATGAGGGACTTTGCTGTGCTTGTCCACTTCAGCAGCTaGTATGGGGAAAGTCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: SQEEPINLLCRMRDFAVLVHFSS*YGESLK Trigger: CTTCAGACTTTCCCCATACCAGCTGCTGAAGTGGAC...AAGCACAGCAAAGTCCCTCATTCTGCACAGAAGGTTTATTGGTTCCTCTTGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544883.5 |
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| 3UTR TCA 72 bp | CTCTTCCAGAGCAACCTGGTGCCCGCTGACCCTGAGTaGAGGCCGCCTGCCGGGGACTCAGACACTCAGGGA | + |
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Preference number: 3 (lower is better) Translates to: LFQSNLVPADPE*RPPAGDSDTQG Trigger: TCCCTGAGTGTCTGAGTCCCCGGCAGGCGGCCTTCACTCAGGGTCAGCGGGCACCAGGTTGCTCTGGAAGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| 3UTR GCA 72 bp | AGAACCACATCCTCAAGCTCTTCCAGAGCAACCTGGTaGCCGCTGACCCTGAGTGAAGGCCGCCTGCCGGGG | + |
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Preference number: 3 (lower is better) Translates to: RTTSSSSSRATW*PLTLSEGRLPG Trigger: CCCCGGCAGGCGGCCTTCACTCAGGGTCAGCGGGCACCAGGTTGCTCTGGAAGAGCTTGAGGATGTGGTTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| 3UTR CCA 72 bp | TCGAGAACCACATCCTCAAGCTCTTCCAGAGCAACCTaGTGCCCGCTGACCCTGAGTGAAGGCCGCCTGCCG | + |
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Preference number: 3 (lower is better) Translates to: SRTTSSSSSRAT*CPLTLSEGRLP Trigger: CGGCAGGCGGCCTTCACTCAGGGTCAGCGGGCACCAGGTTGCTCTGGAAGAGCTTGAGGATGTGGTTCTCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| 3UTR GCA 72 bp | TCGGTTCTCCCAGCTTTGCTCTGTAATGCAGGTCTCTaGAAGGGTCCCTGTTTGTCCCCTAAGGGGAGAGCG | + |
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Preference number: 3 (lower is better) Translates to: SVLPALLCNAGL*KGPCLSPKGRA Trigger: CGCTCTCCCCTTAGGGGACAAACAGGGACCCTTGCAGAGACCTGCATTACAGAGCAAAGCTGGGAGAACCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| 3UTR GCA 72 bp | GAGGTTCCTGGGGTGAGTCCTCGGTTCTCCCAGCTTTaGTCTGTAATGCAGGTCTCTGCAAGGGTCCCTGTT | + |
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Preference number: 3 (lower is better) Translates to: EVPGVSPRFSQL*SVMQVSARVPV Trigger: AACAGGGACCCTTGCAGAGACCTGCATTACAGAGCAAAGCTGGGAGAACCGAGGACTCACCCCAGGAACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| 3UTR TCA 72 bp | GCCCACCTTTTCCCTGCCCCATCTCAGTGCAACAGGTaGTCGAGAACCACATCCTCAAGCTCTTCCAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: AHLFPAPSQCNR*SRTTSSSSSRA Trigger: TGCTCTGGAAGAGCTTGAGGATGTGGTTCTCGATCACCTGTTGCACTGAGATGGGGCAGGGAAAAGGTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| 3UTR TCA 72 bp | CAAGATCACACATCAGGGTTCCCATTCGGGTTTGGGTaGGTCCAAAGCTTCCAGAGGCACAGACCACCCACC | + |
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Preference number: 3 (lower is better) Translates to: QDHTSGFPFGFG*VQSFQRHRPPT Trigger: GGTGGGTGGTCTGTGCCTCTGGAAGCTTTGGACTCACCCAAACCCGAATGGGAACCCTGATGTGTGATCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539678.1 |
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| 3UTR CCA 72 bp | CTCAAACGTCACCTTCAGCCGGTCCACTTCAGCAGCTaGTATGGGGAAAGTCTGAAGCGAGTTGTTGTCCTC | + |
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Preference number: 3 (lower is better) Translates to: LKRHLQPVHFSS*YGESLKRVVVL Trigger: GAGGACAACAACTCGCTTCAGACTTTCCCCATACCAGCTGCTGAAGTGGACCGGCTGAAGGTGACGTTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544883.5 |
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| 3UTR CCA 72 bp | TGTTCAAGATCACACATCAGGGTTCCCATTCGGGTTTaGGTGAGTCCAAAGCTTCCAGAGGCACAGACCACC | + |
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Preference number: 3 (lower is better) Translates to: CSRSHIRVPIRV*VSPKLPEAQTT Trigger: GGTGGTCTGTGCCTCTGGAAGCTTTGGACTCACCCAAACCCGAATGGGAACCCTGATGTGTGATCTTGAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539678.1 |
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| 3UTR CCA 72 bp | GCTGCAGGTCCCTCTAAGCCTCTCACACAGAACAGGTaGTCATCAGCACCATTTTACAGAAAAAGTGGAGTC | + |
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Preference number: 3 (lower is better) Translates to: AAGPSKPLTQNR*SSAPFYRKSGV Trigger: GACTCCACTTTTTCTGTAAAATGGTGCTGATGACCACCTGTTCTGTGTGAGAGGCTTAGAGGGACCTGCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538165.2 ENST00000539678.1 |
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| 3UTR CCA 72 bp | GAACAGGTGGTCATCAGCACCATTTTACAGAAAAAGTaGAGTCCTAGAGGTCACGTGTTCAAGATCACACAT | + |
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Preference number: 3 (lower is better) Translates to: EQVVISTILQKK*SPRGHVFKITH Trigger: ATGTGTGATCTTGAACACGTGACCTCTAGGACTCCACTTTTTCTGTAAAATGGTGCTGATGACCACCTGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000539678.1 |
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| CDS-3UTR CCA 90 bp | TCTTCCAGAGCAACCTGGTGCCCGCTGACCCTGAGTGAAGGCCGCCTGCCGGGGGGCAGCCCCGGCGACTaGAGAAGCCACCCTGAAACT | + |
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Preference number: 4 (lower is better) Translates to: SSRATWCPLTLSEGRLPGGSPGD*RSHPET Trigger: AGTTTCAGGGTGGCTTCTCCAGTCGCCGGGGCTGCC...CCCCGGCAGGCGGCCTTCACTCAGGGTCAGCGGGCACCAGGTTGCTCTGGAAGA 67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| CDS-3UTR CCA 90 bp | CAGGTCTCTGCAAGGGTCCCTGTTTGTCCCCTAAGGGGAGAGCGCAGGTTGGCCTCCAGCGTCACCCACTaGGAGGGGCCCTGGTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: QVSARVPVCPLRGERRLASSVTH*EGPWSE Trigger: CTCAGACCAGGGCCCCTCCCAGTGGGTGACGCTGGA...GGCCAACCTGCGCTCTCCCCTTAGGGGACAAACAGGGACCCTTGCAGAGACCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| CDS-3UTR TCA 90 bp | TCCACCGATGTGGGCAACCTGGGGAAGCTGCAGGTCCCTCTAAGCCTCTCACACAGCCTGAGTGCCCTGTaGACCTTCCAGGCAGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: STDVGNLGKLQVPLSLSHSLSAL*TFQAAP Trigger: CGGGGCTGCCTGGAAGGTTCACAGGGCACTCAGGCT...GTGTGAGAGGCTTAGAGGGACCTGCAGCTTCCCCAGGTTGCCCACATCGGTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538165.2 |
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| CDS-3UTR CCA 90 bp | TCCACCGATGTGGGCAACCTGGGGAAGCTGCAGGTCCCTCTAAGCCTCTCACACTCCAGCGTCACCCACTaGGAGGGGCCCTGGTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: STDVGNLGKLQVPLSLSHSSVTH*EGPWSE Trigger: CTCAGACCAGGGCCCCTCCCAGTGGGTGACGCTGGA...GTGTGAGAGGCTTAGAGGGACCTGCAGCTTCCCCAGGTTGCCCACATCGGTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538165.2 |
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| CDS-3UTR TCA 90 bp | TCTTCCAGAGCAACCTGGTGCCCGCTGACCCTGAGTGAAGGCCGCCTGCCGGGGGTTGCGATTCAGCACTaGACTCACCCTGCTCACTGT | + |
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Preference number: 4 (lower is better) Translates to: SSRATWCPLTLSEGRLPGVAIQH*THPAHC Trigger: ACAGTGAGCAGGGTGAGTTCAGTGCTGAATCGCAAC...CCCCGGCAGGCGGCCTTCACTCAGGGTCAGCGGGCACCAGGTTGCTCTGGAAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| CDS-3UTR TCA 90 bp | CAGGTCTCTGCAAGGGTCCCTGTTTGTCCCCTAAGGGGAGAGCGCAGGTTGGCCGGAGGGGCCCTGGTCTaGGTTCCAACATGTCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: QVSARVPVCPLRGERRLAGGALV*VPTCLL Trigger: GAGGAGACATGTTGGAACTCAGACCAGGGCCCCTCC...GGCCAACCTGCGCTCTCCCCTTAGGGGACAAACAGGGACCCTTGCAGAGACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| CDS-3UTR TCA 90 bp | TCCACCGATGTGGGCAACCTGGGGAAGCTGCAGGTCCCTCTAAGCCTCTCACACGCTGGGAGACACGGATaGGCTGGGGAAACTCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: STDVGNLGKLQVPLSLSHAGRHG*AGETPA Trigger: CGCTGGAGTTTCCCCAGCTCATCCGTGTCTCCCAGC...GTGTGAGAGGCTTAGAGGGACCTGCAGCTTCCCCAGGTTGCCCACATCGGTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538165.2 |
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| CDS-3UTR GCA 90 bp | TCCACCGATGTGGGCAACCTGGGGAAGCTGCAGGTCCCTCTAAGCCTCTCACACCAGGGAAACCGCCAATaGCCGGAGGCCAGGCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: STDVGNLGKLQVPLSLSHQGNRQ*PEARPF Trigger: GAAAGGCCTGGCCTCCGGGCATTGGCGGTTTCCCTG...GTGTGAGAGGCTTAGAGGGACCTGCAGCTTCCCCAGGTTGCCCACATCGGTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538165.2 |
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| CDS-3UTR CCA 90 bp | TCTTCCAGAGCAACCTGGTGCCCGCTGACCCTGAGTGAAGGCCGCCTGCCGGGGATGGTCAGCCAGAGCTaGGGAAACCCAGAACTGACT | + |
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Preference number: 4 (lower is better) Translates to: SSRATWCPLTLSEGRLPGMVSQS*GNPELT Trigger: AGTCAGTTCTGGGTTTCCCCAGCTCTGGCTGACCAT...CCCCGGCAGGCGGCCTTCACTCAGGGTCAGCGGGCACCAGGTTGCTCTGGAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| CDS-3UTR TCA 90 bp | ACCAATAAACCTTCTGTGCAGAATGAGGGACTTTGCTGTGCTTCCCGGAGGGCTCCCGCTGACCCTGAGTaGAGGCCGCCTGCCGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TNKPSVQNEGLCCASRRAPADPE*RPPAGD Trigger: GTCCCCGGCAGGCGGCCTTCACTCAGGGTCAGCGGG...AGCCCTCCGGGAAGCACAGCAAAGTCCCTCATTCTGCACAGAAGGTTTATTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| CDS-3UTR CCA 90 bp | TCTTCCAGAGCAACCTGGTGCCCGCTGACCCTGAGTGAAGGCCGCCTGCCGGGGCCTGCTCACTGTCTCTaGACAAACCAAAGAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSRATWCPLTLSEGRLPGPAHCL*TNQRVG Trigger: ACCCACTCTTTGGTTTGTCCAGAGACAGTGAGCAGG...CCCCGGCAGGCGGCCTTCACTCAGGGTCAGCGGGCACCAGGTTGCTCTGGAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| CDS-3UTR CCA 90 bp | TCTTCCAGAGCAACCTGGTGCCCGCTGACCCTGAGTGAAGGCCGCCTGCCGGGGCTTCAGCAGCTGGTATaGGGAAAGTCTGAAGCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSRATWCPLTLSEGRLPGLQQLV*GKSEAS Trigger: ACTCGCTTCAGACTTTCCCCATACCAGCTGCTGAAG...CCCCGGCAGGCGGCCTTCACTCAGGGTCAGCGGGCACCAGGTTGCTCTGGAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| CDS-3UTR CCA 90 bp | TCCACCGATGTGGGCAACCTGGGGAAGCTGCAGGTCCCTCTAAGCCTCTCACACCACACTCCACCGATGTaGGCAACCTGGGGAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: STDVGNLGKLQVPLSLSHHTPPM*ATWGSC Trigger: GCAGCTTCCCCAGGTTGCCCACATCGGTGGAGTGTG...GTGTGAGAGGCTTAGAGGGACCTGCAGCTTCCCCAGGTTGCCCACATCGGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538165.2 ENST00000539678.1 |
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| CDS-3UTR TCA 90 bp | TCCACCGATGTGGGCAACCTGGGGAAGCTGCAGGTCCCTCTAAGCCTCTCACACCTGGAGAAGCCACCCTaGAACTGGATCTGCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: STDVGNLGKLQVPLSLSHLEKPP*NWICSW Trigger: CCAGCTGCAGATCCAGTTTCAGGGTGGCTTCTCCAG...GTGTGAGAGGCTTAGAGGGACCTGCAGCTTCCCCAGGTTGCCCACATCGGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538165.2 |
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| CDS-3UTR TCA 90 bp | AAACCTTCTGTGCAGAATGAGGGACTTTGCTGTGCTTCCCGGAGGGCTTCCTGGAGCCTGAGTGCCCTGTaGACCTTCCAGGCAGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: KPSVQNEGLCCASRRASWSLSAL*TFQAAP Trigger: CGGGGCTGCCTGGAAGGTTCACAGGGCACTCAGGCT...CCAGGAAGCCCTCCGGGAAGCACAGCAAAGTCCCTCATTCTGCACAGAAGGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331552.12 |
||
| CDS-3UTR TCA 90 bp | CAGGTCTCTGCAAGGGTCCCTGTTTGTCCCCTAAGGGGAGAGCGCAGGTTGGCCATCTTGTGGAGAGCCTaGGTGCCCTGTGAACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QVSARVPVCPLRGERRLAILWRA*VPCEPS Trigger: GGAAGGTTCACAGGGCACTCAGGCTCTCCACAAGAT...GGCCAACCTGCGCTCTCCCCTTAGGGGACAAACAGGGACCCTTGCAGAGACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| CDS-3UTR GCA 90 bp | GGGCAACCTGGGGAAGCTGCAGGTCCCTCTAAGCCTCTCACACAGAACAGGTGGTGTGGAGAGCCTGAGTaGCCTGTGAACCTTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GQPGEAAGPSKPLTQNRWCGEPE*PVNLPG Trigger: GCCTGGAAGGTTCACAGGGCACTCAGGCTCTCCACA...CCACCTGTTCTGTGTGAGAGGCTTAGAGGGACCTGCAGCTTCCCCAGGTTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538165.2 |
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| CDS-3UTR CCA 90 bp | CCACCCACCCCAGAAGCAGGGGCAGGATATCTGAAGCGAGTTGTTGTCCTCAGGCACACTCCACCGATGTaGGCAACCTGGGGAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PPTPEAGAGYLKRVVVLRHTPPM*ATWGSC Trigger: GCAGCTTCCCCAGGTTGCCCACATCGGTGGAGTGTG...CCTGAGGACAACAACTCGCTTCAGATATCCTGCCCCTGCTTCTGGGGTGGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000539678.1 |
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| CDS-3UTR TCA 90 bp | CAACCTGGGGAAGCTGCAGGTCCCTCTAAGCCTCTCACACAGAACAGGTGGTCAGGAGGGGCCCTGGTCTaGGTTCCAACATGTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QPGEAAGPSKPLTQNRWSGGALV*VPTCLL Trigger: GAGGAGACATGTTGGAACTCAGACCAGGGCCCCTCC...TGACCACCTGTTCTGTGTGAGAGGCTTAGAGGGACCTGCAGCTTCCCCAGGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538165.2 |
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| CDS-3UTR TCA 90 bp | CAGCCCACCTTTTCCCTGCCCCATCTCAGTGCAACAGGTGATCGAGAACCACATGCTGGGAGACACGGATaGGCTGGGGAAACTCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QPTFSLPHLSATGDREPHAGRHG*AGETPA Trigger: CGCTGGAGTTTCCCCAGCTCATCCGTGTCTCCCAGC...ATGTGGTTCTCGATCACCTGTTGCACTGAGATGGGGCAGGGAAAAGGTGGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| CDS-3UTR TCA 90 bp | TCCACCGATGTGGGCAACCTGGGGAAGCTGCAGGTCCCTCTAAGCCTCTCACACATCTTGTGGAGAGCCTaGGTGCCCTGTGAACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: STDVGNLGKLQVPLSLSHILWRA*VPCEPS Trigger: GGAAGGTTCACAGGGCACTCAGGCTCTCCACAAGAT...GTGTGAGAGGCTTAGAGGGACCTGCAGCTTCCCCAGGTTGCCCACATCGGTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538165.2 |
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| CDS-3UTR GCA 90 bp | GTCAGCCAGAGCTGGGGAAACCCAGAACTGACTTCAAAGGCAGCTTCTGGACAGCAGGGAAACCGCCAATaGCCGGAGGCCAGGCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSQSWGNPELTSKAASGQQGNRQ*PEARPF Trigger: GAAAGGCCTGGCCTCCGGGCATTGGCGGTTTCCCTG...CTGTCCAGAAGCTGCCTTTGAAGTCAGTTCTGGGTTTCCCCAGCTCTGGCTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| CDS-3UTR GCA 90 bp | AAACCTTCTGTGCAGAATGAGGGACTTTGCTGTGCTTCCCGGAGGGCTTCCTGGCAGGGAAACCGCCAATaGCCGGAGGCCAGGCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KPSVQNEGLCCASRRASWQGNRQ*PEARPF Trigger: GAAAGGCCTGGCCTCCGGGCATTGGCGGTTTCCCTG...CCAGGAAGCCCTCCGGGAAGCACAGCAAAGTCCCTCATTCTGCACAGAAGGTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| CDS-3UTR GCA 90 bp | AATGGTCAGCCAGAGCTGGGGAAACCCAGAACTGACTTCAAAGGCAGCTTCTGGGCGCAGGTTGGCCTGTaGCTCCACCCCACTCCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: NGQPELGKPRTDFKGSFWAQVGL*LHPTPD Trigger: ATCGGGAGTGGGGTGGAGGCACAGGCCAACCTGCGC...CCAGAAGCTGCCTTTGAAGTCAGTTCTGGGTTTCCCCAGCTCTGGCTGACCATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| CDS-3UTR CCA 90 bp | AACCTGGGGAAGCTGCAGGTCCCTCTAAGCCTCTCACACAGAACAGGTGGTCATGGCAGCCCCGGCGACTaGAGAAGCCACCCTGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: NLGKLQVPLSLSHRTGGHGSPGD*RSHPET Trigger: AGTTTCAGGGTGGCTTCTCCAGTCGCCGGGGCTGCC...ATGACCACCTGTTCTGTGTGAGAGGCTTAGAGGGACCTGCAGCTTCCCCAGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538165.2 |
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| CDS-3UTR CCA 90 bp | CACCTTCAGCCGGTCCACTTCAGCAGCTGGTATGGGGAAAGTCTGAAGCGAGTTCAGCTTCTGGACAGGTaGTGGGAGGGGACCCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HLQPVHFSSWYGESLKRVQLLDR*WEGTLP Trigger: GGGAAGGGTCCCCTCCCACCACCTGTCCAGAAGCTG...AACTCGCTTCAGACTTTCCCCATACCAGCTGCTGAAGTGGACCGGCTGAAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000544883.5 |
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| CDS-3UTR TCA 90 bp | TTCCCAAGAGGAACCAATAAACCTTCTGTGCAGAATGAGGGACTTTGCTGTGCTCCCGCTGACCCTGAGTaGAGGCCGCCTGCCGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FPRGTNKPSVQNEGLCCAPADPE*RPPAGD Trigger: GTCCCCGGCAGGCGGCCTTCACTCAGGGTCAGCGGG...AGCACAGCAAAGTCCCTCATTCTGCACAGAAGGTTTATTGGTTCCTCTTGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| CDS-3UTR TCA 90 bp | CAGCCCACCTTTTCCCTGCCCCATCTCAGTGCAACAGGTGATCGAGAACCACATTTGAGGTTCCTGGGGTaGGTCCTCGGTTCTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QPTFSLPHLSATGDREPHLRFLG*VLGSPS Trigger: GCTGGGAGAACCGAGGACTCACCCCAGGAACCTCAA...ATGTGGTTCTCGATCACCTGTTGCACTGAGATGGGGCAGGGAAAAGGTGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| CDS-3UTR TCA 90 bp | CCACCCACCCCAGAAGCAGGGGCAGGATATCTGAAGCGAGTTGTTGTCCTCAGGATCTTGTGGAGAGCCTaGGTGCCCTGTGAACCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPTPEAGAGYLKRVVVLRILWRA*VPCEPG Trigger: ACCAGGTTCACAGGGCACTCAGGCTCTCCACAAGAT...CCTGAGGACAACAACTCGCTTCAGATATCCTGCCCCTGCTTCTGGGGTGGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000539678.1 |
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| CDS-3UTR CCA 90 bp | CACTCCCGATTCAAGCTCACAGCCCACCTTTTCCCTGCCCCATCTCAGTGCAACCACTGGGAGGGGCCCTaGTCTGAGTTCCAACATGTC | + |
|
Preference number: 4 (lower is better) Translates to: HSRFKLTAHLFPAPSQCNHWEGP*SEFQHV Trigger: GACATGTTGGAACTCAGACCAGGGCCCCTCCCAGTG...GTTGCACTGAGATGGGGCAGGGAAAAGGTGGGCTGTGAGCTTGAATCGGGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| CDS-3UTR CCA 90 bp | CAGCCCACCTTTTCCCTGCCCCATCTCAGTGCAACAGGTGATCGAGAACCACATCTTCTGGACAGGTGGTaGGAGGGGACCCTTCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QPTFSLPHLSATGDREPHLLDRW*EGTLPK Trigger: CTTGGGAAGGGTCCCCTCCCACCACCTGTCCAGAAG...ATGTGGTTCTCGATCACCTGTTGCACTGAGATGGGGCAGGGAAAAGGTGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| CDS-3UTR CCA 90 bp | AAGTCAGTGGCATCCTCAAACGTCACCTTCAGCCGGTCCACTTCAGCAGCTGGTCTTCTGGACAGGTGGTaGGAGGGGACCCTTCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KSVASSNVTFSRSTSAAGLLDRW*EGTLPK Trigger: CTTGGGAAGGGTCCCCTCCCACCACCTGTCCAGAAG...ACCAGCTGCTGAAGTGGACCGGCTGAAGGTGACGTTTGAGGATGCCACTGACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544883.5 |
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| 3UTR CAA 72 bp | TTGCTCTGTAATGCAGGTCTCTGCAAGGGTCCCTGTTaGTCCCCTAAGGGGAGAGCGCAGGTTGGCCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLCNAGLCKGPC*SPKGRAQVGLC Trigger: GCACAGGCCAACCTGCGCTCTCCCCTTAGGGGACAAACAGGGACCCTTGCAGAGACCTGCATTACAGAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| CDS-3UTR TCA 90 bp | GTGGGCAACCTGGGGAAGCTGCAGGTCCCTCTAAGCCTCTCACACAGAACAGGTGTTGCGATTCAGCACTaGACTCACCCTGCTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: VGNLGKLQVPLSLSHRTGVAIQH*THPAHC Trigger: ACAGTGAGCAGGGTGAGTTCAGTGCTGAATCGCAAC...ACCTGTTCTGTGTGAGAGGCTTAGAGGGACCTGCAGCTTCCCCAGGTTGCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538165.2 |
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| CDS-3UTR TCA 90 bp | ACTCCCGATTCAAGCTCACAGCCCACCTTTTCCCTGCCCCATCTCAGTGCAACACTGGAGAAGCCACCCTaGAACTGGATCTGCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TPDSSSQPTFSLPHLSATLEKPP*NWICSW Trigger: CCAGCTGCAGATCCAGTTTCAGGGTGGCTTCTCCAG...TGTTGCACTGAGATGGGGCAGGGAAAAGGTGGGCTGTGAGCTTGAATCGGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| CDS-3UTR TCA 90 bp | CACAGACCACCCACCCCAGAAGCAGGGGCAGGATATCTGAAGCGAGTTGTTGTCCCATTCGGGTTTGGGTaGGTCCAAAGCTTCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HRPPTPEAGAGYLKRVVVPFGFG*VQSFQR Trigger: CCTCTGGAAGCTTTGGACTCACCCAAACCCGAATGG...GACAACAACTCGCTTCAGATATCCTGCCCCTGCTTCTGGGGTGGGTGGTCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000539678.1 |
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| CDS-3UTR GCA 90 bp | TGGCCTGTGCCTCCACCCCACTCCCGATTCAAGCTCACAGCCCACCTTTTCCCTGCACTGAACTCACCCTaGTCACTGTCTCTGGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: WPVPPPHSRFKLTAHLFPALNSP*SLSLDK Trigger: TTTGTCCAGAGACAGTGAGCAGGGTGAGTTCAGTGC...AGGGAAAAGGTGGGCTGTGAGCTTGAATCGGGAGTGGGGTGGAGGCACAGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| CDS-3UTR GCA 90 bp | GGGCAACCTGGGGAAGCTGCAGGTCCCTCTAAGCCTCTCACACAGAACAGGTGGGCACTGAACTCACCCTaGTCACTGTCTCTGGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: GQPGEAAGPSKPLTQNRWALNSP*SLSLDK Trigger: TTTGTCCAGAGACAGTGAGCAGGGTGAGTTCAGTGC...CCACCTGTTCTGTGTGAGAGGCTTAGAGGGACCTGCAGCTTCCCCAGGTTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538165.2 |
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| CDS-3UTR CCA 90 bp | GGGCAACCTGGGGAAGCTGCAGGTCCCTCTAAGCCTCTCACACAGAACAGGTGGCCCTGCCGGAAAATTTaGGAGAGAGGATCAGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GQPGEAAGPSKPLTQNRWPCRKI*ERGSGK Trigger: TTTCCCTGATCCTCTCTCCCAAATTTTCCGGCAGGG...CCACCTGTTCTGTGTGAGAGGCTTAGAGGGACCTGCAGCTTCCCCAGGTTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538165.2 |
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| CDS-3UTR CCA 90 bp | AACCTGGGGAAGCTGCAGGTCCCTCTAAGCCTCTCACACAGAACAGGTGGTCATGAGACACGGATGAGCTaGGGAAACTCCAGCGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: NLGKLQVPLSLSHRTGGHETRMS*GNSSVT Trigger: GGTGACGCTGGAGTTTCCCCAGCTCATCCGTGTCTC...ATGACCACCTGTTCTGTGTGAGAGGCTTAGAGGGACCTGCAGCTTCCCCAGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538165.2 |
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| CDS-3UTR CCA 90 bp | CAACCTGGGGAAGCTGCAGGTCCCTCTAAGCCTCTCACACAGAACAGGTGGTCAAACTGGATCTGCAGCTaGGAGACACGGATGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QPGEAAGPSKPLTQNRWSNWICS*ETRMSW Trigger: CCAGCTCATCCGTGTCTCCCAGCTGCAGATCCAGTT...TGACCACCTGTTCTGTGTGAGAGGCTTAGAGGGACCTGCAGCTTCCCCAGGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538165.2 |
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| CDS-3UTR CCA 90 bp | TGGCCTGTGCCTCCACCCCACTCCCGATTCAAGCTCACAGCCCACCTTTTCCCTCTTCAGCAGCTGGTATaGGGAAAGTCTGAAGCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: WPVPPPHSRFKLTAHLFPLQQLV*GKSEAS Trigger: ACTCGCTTCAGACTTTCCCCATACCAGCTGCTGAAG...AGGGAAAAGGTGGGCTGTGAGCTTGAATCGGGAGTGGGGTGGAGGCACAGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| CDS-3UTR CCA 90 bp | ACCAATAAACCTTCTGTGCAGAATGAGGGACTTTGCTGTGCTTCCCGGAGGGCTCAGCTTCTGGACAGGTaGTGGGAGGGGACCCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TNKPSVQNEGLCCASRRAQLLDR*WEGTLP Trigger: GGGAAGGGTCCCCTCCCACCACCTGTCCAGAAGCTG...AGCCCTCCGGGAAGCACAGCAAAGTCCCTCATTCTGCACAGAAGGTTTATTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| CDS-3UTR CCA 90 bp | CACCTTCAGCCGGTCCACTTCAGCAGCTGGTATGGGGAAAGTCTGAAGCGAGTTTTCAAAGGCAGCTTCTaGACAGGTGGTGGGAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HLQPVHFSSWYGESLKRVFKGSF*TGGGRG Trigger: TCCCCTCCCACCACCTGTCCAGAAGCTGCCTTTGAA...AACTCGCTTCAGACTTTCCCCATACCAGCTGCTGAAGTGGACCGGCTGAAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000544883.5 |
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| CDS-3UTR TCA 90 bp | AACCTTCTGTGCAGAATGAGGGACTTTGCTGTGCTTCCCGGAGGGCTTCCTGGAGTTGCGATTCAGCACTaGACTCACCCTGCTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: NLLCRMRDFAVLPGGLPGVAIQH*THPAHC Trigger: ACAGTGAGCAGGGTGAGTTCAGTGCTGAATCGCAAC...TCCAGGAAGCCCTCCGGGAAGCACAGCAAAGTCCCTCATTCTGCACAGAAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| CDS-3UTR GCA 90 bp | GTGGGCAACCTGGGGAAGCTGCAGGTCCCTCTAAGCCTCTCACACAGAACAGGTCAAACTGCCGAGTGTTaGGATTCAGCACTGAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: VGNLGKLQVPLSLSHRTGQTAEC*DSALNS Trigger: TGAGTTCAGTGCTGAATCGCAACACTCGGCAGTTTG...ACCTGTTCTGTGTGAGAGGCTTAGAGGGACCTGCAGCTTCCCCAGGTTGCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538165.2 |
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| CDS-3UTR GCA 90 bp | GAACAAAATGGTCAGCCAGAGCTGGGGAAACCCAGAACTGACTTCAAAGGCAGCTGTGGAGAGCCTGAGTaGCCTGTGAACCTTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EQNGQPELGKPRTDFKGSCGEPE*PVNLPG Trigger: GCCTGGAAGGTTCACAGGGCACTCAGGCTCTCCACA...GCTGCCTTTGAAGTCAGTTCTGGGTTTCCCCAGCTCTGGCTGACCATTTTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| CDS-3UTR CCA 90 bp | GAGGAACCAATAAACCTTCTGTGCAGAATGAGGGACTTTGCTGTGCTTCCCGGAGGGTTTCGGGGGCGGTaGCTTTTTGTGCGAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EEPINLLCRMRDFAVLPGGFRGR*LFVRGC Trigger: ACAGCCTCGCACAAAAAGCCACCGCCCCCGAAACCC...TCCGGGAAGCACAGCAAAGTCCCTCATTCTGCACAGAAGGTTTATTGGTTCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000331552.12 |
||
| CDS-3UTR CCA 90 bp | CACTCAGGGAACAAAATGGTCAGCCAGAGCTGGGGAAACCCAGAACTGACTTCAGAGACACGGATGAGCTaGGGAAACTCCAGCGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: HSGNKMVSQSWGNPELTSETRMS*GNSSVT Trigger: GGTGACGCTGGAGTTTCCCCAGCTCATCCGTGTCTC...TGAAGTCAGTTCTGGGTTTCCCCAGCTCTGGCTGACCATTTTGTTCCCTGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| CDS-3UTR CCA 90 bp | ACCAATAAACCTTCTGTGCAGAATGAGGGACTTTGCTGTGCTTCCCGGAGGGCTTCTTCCAGAGCAACCTaGTGCCCGCTGACCCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TNKPSVQNEGLCCASRRASSRAT*CPLTLS Trigger: ACTCAGGGTCAGCGGGCACCAGGTTGCTCTGGAAGA...AGCCCTCCGGGAAGCACAGCAAAGTCCCTCATTCTGCACAGAAGGTTTATTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| CDS-3UTR TCA 90 bp | AAACCTTCTGTGCAGAATGAGGGACTTTGCTGTGCTTCCCGGAGGGCTTCCTGGACCTTCTGTGCAGAATaGGGGACTTTGCTGTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KPSVQNEGLCCASRRASWTFCAE*GTLLCF Trigger: GAAGCACAGCAAAGTCCCTCATTCTGCACAGAAGGT...CCAGGAAGCCCTCCGGGAAGCACAGCAAAGTCCCTCATTCTGCACAGAAGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
||
| CDS-3UTR TCA 90 bp | ACACATCAGGGTTCCCATTCGGGTTTGGGTGAGTCCAAAGCTTCCAGAGGCACACAGGGGCAGGATATCTaGAGCGAGTTGTTGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: THQGSHSGLGESKASRGTQGQDI*SELLSS Trigger: TGAGGACAACAACTCGCTTCAGATATCCTGCCCCTG...TGTGCCTCTGGAAGCTTTGGACTCACCCAAACCCGAATGGGAACCCTGATGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539678.1 |
||
| CDS-3UTR TCA 90 bp | GTGCAACAGGTGATCGAGAACCACATCCTCAAGCTCTTCCAGAGCAACCTGGTGCCTGTGAACCTGGTCTaGGTTCCAACATGTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VQQVIENHILKLFQSNLVPVNLV*VPTCLL Trigger: GAGGAGACATGTTGGAACTCAGACCAGGTTCACAGG...CACCAGGTTGCTCTGGAAGAGCTTGAGGATGTGGTTCTCGATCACCTGTTGCAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544883.5 |
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| CDS-3UTR GCA 90 bp | AACCTGGGGAAGCTGCAGGTCCCTCTAAGCCTCTCACACAGAACAGGTGGTCATCCTCGATCAATCCCCTaGCGGAAAATTTGGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NLGKLQVPLSLSHRTGGHPRSIP*RKIWER Trigger: TCTCTCCCAAATTTTCCGGCAGGGGATTGATCGAGG...ATGACCACCTGTTCTGTGTGAGAGGCTTAGAGGGACCTGCAGCTTCCCCAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000538165.2 |
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| CDS-3UTR GCA 90 bp | GAGGTTCCTGGGGTGAGTCCTCGGTTCTCCCAGCTTTGCTCTGTAATGCAGGTCCAAACTGCCGAGTGTTaGGATTCAGCACTGAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: EVPGVSPRFSQLCSVMQVQTAEC*DSALNS Trigger: TGAGTTCAGTGCTGAATCGCAACACTCGGCAGTTTG...GACCTGCATTACAGAGCAAAGCTGGGAGAACCGAGGACTCACCCCAGGAACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| CDS-3UTR GCA 90 bp | GAACAAAATGGTCAGCCAGAGCTGGGGAAACCCAGAACTGACTTCAAAGGCAGCCAGAATGAGGGACTTTaGTGTGCTTCCCGGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EQNGQPELGKPRTDFKGSQNEGL*CASRRA Trigger: AGCCCTCCGGGAAGCACAGCAAAGTCCCTCATTCTG...GCTGCCTTTGAAGTCAGTTCTGGGTTTCCCCAGCTCTGGCTGACCATTTTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| CDS-3UTR GCA 90 bp | CATCTCAGTGCAACAGGTGATCGAGAACCACATCCTCAAGCTCTTCCAGAGCAATCCAGAGCAACCTGGTaGCCGCTGACCCTGAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HLSATGDREPHPQALPEQSRATW*PLTLSE Trigger: TTCACTCAGGGTCAGCGGGCACCAGGTTGCTCTGGA...TTGCTCTGGAAGAGCTTGAGGATGTGGTTCTCGATCACCTGTTGCACTGAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| CDS-3UTR GCA 90 bp | ACTCCCGATTCAAGCTCACAGCCCACCTTTTCCCTGCCCCATCTCAGTGCAACACGGTTCTCCCAGCTTTaGTCTGTAATGCAGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TPDSSSQPTFSLPHLSATRFSQL*SVMQVS Trigger: AGAGACCTGCATTACAGAGCAAAGCTGGGAGAACCG...TGTTGCACTGAGATGGGGCAGGGAAAAGGTGGGCTGTGAGCTTGAATCGGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| CDS-3UTR CCA 90 bp | AACCTGGGGAAGCTGCAGGTCCCTCTAAGCCTCTCACACAGAACAGGTGGTCATCCTGCTCACTGTCTCTaGACAAACCAAAGAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NLGKLQVPLSLSHRTGGHPAHCL*TNQRVG Trigger: ACCCACTCTTTGGTTTGTCCAGAGACAGTGAGCAGG...ATGACCACCTGTTCTGTGTGAGAGGCTTAGAGGGACCTGCAGCTTCCCCAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538165.2 |
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| CDS-3UTR CCA 90 bp | CACCTTCAGCCGGTCCACTTCAGCAGCTGGTATGGGGAAAGTCTGAAGCGAGTTGTCCACTTCAGCAGCTaGTATGGGGAAAGTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HLQPVHFSSWYGESLKRVVHFSS*YGESLK Trigger: CTTCAGACTTTCCCCATACCAGCTGCTGAAGTGGAC...AACTCGCTTCAGACTTTCCCCATACCAGCTGCTGAAGTGGACCGGCTGAAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000544883.5 |
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| CDS-3UTR CCA 90 bp | ACCAATAAACCTTCTGTGCAGAATGAGGGACTTTGCTGTGCTTCCCGGAGGGCTTTCAAAGGCAGCTTCTaGACAGGTGGTGGGAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TNKPSVQNEGLCCASRRAFKGSF*TGGGRG Trigger: TCCCCTCCCACCACCTGTCCAGAAGCTGCCTTTGAA...AGCCCTCCGGGAAGCACAGCAAAGTCCCTCATTCTGCACAGAAGGTTTATTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| CDS-3UTR CCA 90 bp | ACTCCCGATTCAAGCTCACAGCCCACCTTTTCCCTGCCCCATCTCAGTGCAACAACTCAGGGAACAAAATaGTCAGCCAGAGCTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TPDSSSQPTFSLPHLSATTQGTK*SARAGE Trigger: TTCCCCAGCTCTGGCTGACCATTTTGTTCCCTGAGT...TGTTGCACTGAGATGGGGCAGGGAAAAGGTGGGCTGTGAGCTTGAATCGGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| 3UTR CAA 72 bp | GTGTTCAAGATCACACATCAGGGTTCCCATTCGGGTTaGGGTGAGTCCAAAGCTTCCAGAGGCACAGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: VFKITHQGSHSG*GESKASRGTDH Trigger: GTGGTCTGTGCCTCTGGAAGCTTTGGACTCACCCAAACCCGAATGGGAACCCTGATGTGTGATCTTGAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539678.1 |
||
| CDS-3UTR TCA 90 bp | GTGCAACAGGTGATCGAGAACCACATCCTCAAGCTCTTCCAGAGCAACCTGGTGTCTCAGTGCAACAGGTaGTCGAGAACCACATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VQQVIENHILKLFQSNLVSQCNR*SRTTSS Trigger: TGAGGATGTGGTTCTCGATCACCTGTTGCACTGAGA...CACCAGGTTGCTCTGGAAGAGCTTGAGGATGTGGTTCTCGATCACCTGTTGCAC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| CDS-3UTR TCA 90 bp | GAACAAAATGGTCAGCCAGAGCTGGGGAAACCCAGAACTGACTTCAAAGGCAGCAAACTTAGGGGAAGTTaGGGTTCCTGGGGTGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EQNGQPELGKPRTDFKGSKLRGS*GSWGES Trigger: GGACTCACCCCAGGAACCTCAACTTCCCCTAAGTTT...GCTGCCTTTGAAGTCAGTTCTGGGTTTCCCCAGCTCTGGCTGACCATTTTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000331552.12 |
||
| CDS-3UTR TCA 90 bp | CATCTCAGTGCAACAGGTGATCGAGAACCACATCCTCAAGCTCTTCCAGAGCAAATCTTGTGGAGAGCCTaGGTGCCCTGTGAACCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HLSATGDREPHPQALPEQILWRA*VPCEPG Trigger: ACCAGGTTCACAGGGCACTCAGGCTCTCCACAAGAT...TTGCTCTGGAAGAGCTTGAGGATGTGGTTCTCGATCACCTGTTGCACTGAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544883.5 |
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| CDS-3UTR GCA 90 bp | GAGGAACCAATAAACCTTCTGTGCAGAATGAGGGACTTTGCTGTGCTTCCCGGACAGAATGAGGGACTTTaGTGTGCTTCCCGGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EEPINLLCRMRDFAVLPGQNEGL*CASRRA Trigger: AGCCCTCCGGGAAGCACAGCAAAGTCCCTCATTCTG...TCCGGGAAGCACAGCAAAGTCCCTCATTCTGCACAGAAGGTTTATTGGTTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| CDS-3UTR GCA 90 bp | CCTTCCCAAGAGGAACCAATAAACCTTCTGTGCAGAATGAGGGACTTTGCTGTGTCCAGAGCAACCTGGTaGCCGCTGACCCTGAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PSQEEPINLLCRMRDFAVSRATW*PLTLSE Trigger: TTCACTCAGGGTCAGCGGGCACCAGGTTGCTCTGGA...CACAGCAAAGTCCCTCATTCTGCACAGAAGGTTTATTGGTTCCTCTTGGGAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| CDS-3UTR GCA 90 bp | GTGCAACAGGTGATCGAGAACCACATCCTCAAGCTCTTCCAGAGCAACCTGGTGTGTAATGCAGGTCTCTaGAAGGGTCCCTGTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VQQVIENHILKLFQSNLVCNAGL*KGPCLS Trigger: GGACAAACAGGGACCCTTGCAGAGACCTGCATTACA...CACCAGGTTGCTCTGGAAGAGCTTGAGGATGTGGTTCTCGATCACCTGTTGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| CDS-3UTR CCA 90 bp | AATGGTCAGCCAGAGCTGGGGAAACCCAGAACTGACTTCAAAGGCAGCTTCTGGTCTGCGAATAGCTCTTaGAGCCAAATCTTGGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: NGQPELGKPRTDFKGSFWSANSS*SQILGP Trigger: GGGTCCCAAGATTTGGCTCCAAGAGCTATTCGCAGA...CCAGAAGCTGCCTTTGAAGTCAGTTCTGGGTTTCCCCAGCTCTGGCTGACCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| CDS-3UTR CCA 90 bp | CAGCCAGAGCTGGGGAAACCCAGAACTGACTTCAAAGGCAGCTTCTGGACAGGTGGACAAACCAAAGAGTaGGTCATGTCGGTTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: QPELGKPRTDFKGSFWTGGQTKE*VMSVPQ Trigger: TTGTGGAACCGACATGACCCACTCTTTGGTTTGTCC...ACCTGTCCAGAAGCTGCCTTTGAAGTCAGTTCTGGGTTTCCCCAGCTCTGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| CDS-3UTR CCA 90 bp | GAAGTTGAGGTTCCTGGGGTGAGTCCTCGGTTCTCCCAGCTTTGCTCTGTAATGGTCCACTTCAGCAGCTaGTATGGGGAAAGTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EVEVPGVSPRFSQLCSVMVHFSS*YGESLK Trigger: CTTCAGACTTTCCCCATACCAGCTGCTGAAGTGGAC...CATTACAGAGCAAAGCTGGGAGAACCGAGGACTCACCCCAGGAACCTCAACTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| CDS-3UTR GCA 90 bp | GAACAAAATGGTCAGCCAGAGCTGGGGAAACCCAGAACTGACTTCAAAGGCAGCCCTCGATCAATCCCCTaGCGGAAAATTTGGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EQNGQPELGKPRTDFKGSPRSIP*RKIWER Trigger: TCTCTCCCAAATTTTCCGGCAGGGGATTGATCGAGG...GCTGCCTTTGAAGTCAGTTCTGGGTTTCCCCAGCTCTGGCTGACCATTTTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| CDS-3UTR GCA 90 bp | GAGGTTCCTGGGGTGAGTCCTCGGTTCTCCCAGCTTTGCTCTGTAATGCAGGTCCCAATAAACCTTCTGTaGAGAATGAGGGACTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EVPGVSPRFSQLCSVMQVPINLL*RMRDFA Trigger: AGCAAAGTCCCTCATTCTGCACAGAAGGTTTATTGG...GACCTGCATTACAGAGCAAAGCTGGGAGAACCGAGGACTCACCCCAGGAACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| CDS-3UTR CCA 90 bp | GCACCATTTTACAGAAAAAGTGGAGTCCTAGAGGTCACGTGTTCAAGATCACACGGGTTTCGGGGGCGGTaGCTTTTTGTGCGAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: APFYRKSGVLEVTCSRSHGFRGR*LFVRGC Trigger: ACAGCCTCGCACAAAAAGCCACCGCCCCCGAAACCC...GTGTGATCTTGAACACGTGACCTCTAGGACTCCACTTTTTCTGTAAAATGGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000538165.2 |
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| CDS-3UTR CCA 90 bp | CATCTCAGTGCAACAGGTGATCGAGAACCACATCCTCAAGCTCTTCCAGAGCAAATGGTCAGCCAGAGCTaGGGAAACCCAGAACTGACT | + |
|
Preference number: 4 (lower is better) Translates to: HLSATGDREPHPQALPEQMVSQS*GNPELT Trigger: AGTCAGTTCTGGGTTTCCCCAGCTCTGGCTGACCAT...TTGCTCTGGAAGAGCTTGAGGATGTGGTTCTCGATCACCTGTTGCACTGAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| CDS-3UTR CCA 90 bp | TCCCAAGAGGAACCAATAAACCTTCTGTGCAGAATGAGGGACTTTGCTGTGCTTTCTTCCAGAGCAACCTaGTGCCCGCTGACCCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SQEEPINLLCRMRDFAVLSSRAT*CPLTLS Trigger: ACTCAGGGTCAGCGGGCACCAGGTTGCTCTGGAAGA...AAGCACAGCAAAGTCCCTCATTCTGCACAGAAGGTTTATTGGTTCCTCTTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| CDS-3UTR TCA 90 bp | CATCTCAGTGCAACAGGTGATCGAGAACCACATCCTCAAGCTCTTCCAGAGCAATCTCAGTGCAACAGGTaGTCGAGAACCACATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HLSATGDREPHPQALPEQSQCNR*SRTTSS Trigger: TGAGGATGTGGTTCTCGATCACCTGTTGCACTGAGA...TTGCTCTGGAAGAGCTTGAGGATGTGGTTCTCGATCACCTGTTGCACTGAGATG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| CDS-3UTR TCA 90 bp | AAAAGTGGAGTCCTAGAGGTCACGTGTTCAAGATCACACATCAGGGTTCCCATTAGCCTGAGTGCCCTGTaGACCTGGTCTGAGTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KSGVLEVTCSRSHIRVPISLSAL*TWSEFQ Trigger: TTGGAACTCAGACCAGGTTCACAGGGCACTCAGGCT...AATGGGAACCCTGATGTGTGATCTTGAACACGTGACCTCTAGGACTCCACTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539678.1 |
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| CDS-3UTR TCA 90 bp | TTCCCAAGAGGAACCAATAAACCTTCTGTGCAGAATGAGGGACTTTGCTGTGCTAGCCTGAGTGCCCTGTaGACCTGGTCTGAGTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FPRGTNKPSVQNEGLCCASLSAL*TWSEFQ Trigger: TTGGAACTCAGACCAGGTTCACAGGGCACTCAGGCT...AGCACAGCAAAGTCCCTCATTCTGCACAGAAGGTTTATTGGTTCCTCTTGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544883.5 |
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| CDS-3UTR GCA 90 bp | GAGGAACCAATAAACCTTCTGTGCAGAATGAGGGACTTTGCTGTGCTTCCCGGAGCACTGAACTCACCCTaGTCACTGTCTCTGGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: EEPINLLCRMRDFAVLPGALNSP*SLSLDK Trigger: TTTGTCCAGAGACAGTGAGCAGGGTGAGTTCAGTGC...TCCGGGAAGCACAGCAAAGTCCCTCATTCTGCACAGAAGGTTTATTGGTTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| CDS-3UTR CCA 90 bp | CATCTCAGTGCAACAGGTGATCGAGAACCACATCCTCAAGCTCTTCCAGAGCAACCCTGCCGGAAAATTTaGGAGAGAGGATCAGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HLSATGDREPHPQALPEQPCRKI*ERGSGK Trigger: TTTCCCTGATCCTCTCTCCCAAATTTTCCGGCAGGG...TTGCTCTGGAAGAGCTTGAGGATGTGGTTCTCGATCACCTGTTGCACTGAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| CDS-3UTR CCA 90 bp | CACTCAGGGAACAAAATGGTCAGCCAGAGCTGGGGAAACCCAGAACTGACTTCAGGACAAACCAAAGAGTaGGTCATGTCGGTTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: HSGNKMVSQSWGNPELTSGQTKE*VMSVPQ Trigger: TTGTGGAACCGACATGACCCACTCTTTGGTTTGTCC...TGAAGTCAGTTCTGGGTTTCCCCAGCTCTGGCTGACCATTTTGTTCCCTGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| CDS-3UTR CCA 90 bp | GCACCATTTTACAGAAAAAGTGGAGTCCTAGAGGTCACGTGTTCAAGATCACACCACTGGGAGGGGCCCTaGTCTGAGTTCCAACATGTC | + |
|
Preference number: 4 (lower is better) Translates to: APFYRKSGVLEVTCSRSHHWEGP*SEFQHV Trigger: GACATGTTGGAACTCAGACCAGGGCCCCTCCCAGTG...GTGTGATCTTGAACACGTGACCTCTAGGACTCCACTTTTTCTGTAAAATGGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000538165.2 |
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| CDS-3UTR CCA 90 bp | TCCCAAGAGGAACCAATAAACCTTCTGTGCAGAATGAGGGACTTTGCTGTGCTTAACTGGATCTGCAGCTaGGAGACACGGATGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQEEPINLLCRMRDFAVLNWICS*ETRMSW Trigger: CCAGCTCATCCGTGTCTCCCAGCTGCAGATCCAGTT...AAGCACAGCAAAGTCCCTCATTCTGCACAGAAGGTTTATTGGTTCCTCTTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| CDS-3UTR TCA 90 bp | GCACCATTTTACAGAAAAAGTGGAGTCCTAGAGGTCACGTGTTCAAGATCACACCCATTCGGGTTTGGGTaGGTCCAAAGCTTCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: APFYRKSGVLEVTCSRSHPFGFG*VQSFQR Trigger: CCTCTGGAAGCTTTGGACTCACCCAAACCCGAATGG...GTGTGATCTTGAACACGTGACCTCTAGGACTCCACTTTTTCTGTAAAATGGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000538165.2 ENST00000539678.1 |
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| CDS-3UTR CCA 90 bp | CCCTTCCCAAGAGGAACCAATAAACCTTCTGTGCAGAATGAGGGACTTTGCTGTACTCAGGGAACAAAATaGTCAGCCAGAGCTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PFPRGTNKPSVQNEGLCCTQGTK*SARAGE Trigger: TTCCCCAGCTCTGGCTGACCATTTTGTTCCCTGAGT...ACAGCAAAGTCCCTCATTCTGCACAGAAGGTTTATTGGTTCCTCTTGGGAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| CDS-3UTR CCA 90 bp | GCACCATTTTACAGAAAAAGTGGAGTCCTAGAGGTCACGTGTTCAAGATCACACGAAACTGGTGATTTCTaGTTTCCCACCCGCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: APFYRKSGVLEVTCSRSHETGDF*FPTRRP Trigger: GGGCCTGCGGGTGGGAAACCAGAAATCACCAGTTTC...GTGTGATCTTGAACACGTGACCTCTAGGACTCCACTTTTTCTGTAAAATGGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000538165.2 |
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| CDS-3UTR TCA 90 bp | GCACCATTTTACAGAAAAAGTGGAGTCCTAGAGGTCACGTGTTCAAGATCACACCAGGGGCAGGATATCTaGAGCGAGTTGTTGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: APFYRKSGVLEVTCSRSHQGQDI*SELLSS Trigger: TGAGGACAACAACTCGCTTCAGATATCCTGCCCCTG...GTGTGATCTTGAACACGTGACCTCTAGGACTCCACTTTTTCTGTAAAATGGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000538165.2 ENST00000539678.1 |
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| CDS-3UTR TCA 90 bp | GCACCATTTTACAGAAAAAGTGGAGTCCTAGAGGTCACGTGTTCAAGATCACACCCTGTGAACCTGGTCTaGGTTCCAACATGTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: APFYRKSGVLEVTCSRSHPVNLV*VPTCLL Trigger: GAGGAGACATGTTGGAACTCAGACCAGGTTCACAGG...GTGTGATCTTGAACACGTGACCTCTAGGACTCCACTTTTTCTGTAAAATGGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000539678.1 |
||
| CDS-3UTR GCA 90 bp | CCCTTCCCAAGAGGAACCAATAAACCTTCTGTGCAGAATGAGGGACTTTGCTGTCAAACTGCCGAGTGTTaGGATTCAGCACTGAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: PFPRGTNKPSVQNEGLCCQTAEC*DSALNS Trigger: TGAGTTCAGTGCTGAATCGCAACACTCGGCAGTTTG...ACAGCAAAGTCCCTCATTCTGCACAGAAGGTTTATTGGTTCCTCTTGGGAAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| CDS-3UTR GCA 90 bp | CATCTCAGTGCAACAGGTGATCGAGAACCACATCCTCAAGCTCTTCCAGAGCAACCAATAAACCTTCTGTaGAGAATGAGGGACTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLSATGDREPHPQALPEQPINLL*RMRDFA Trigger: AGCAAAGTCCCTCATTCTGCACAGAAGGTTTATTGG...TTGCTCTGGAAGAGCTTGAGGATGTGGTTCTCGATCACCTGTTGCACTGAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
||
| CDS-3UTR CCA 90 bp | GCACCATTTTACAGAAAAAGTGGAGTCCTAGAGGTCACGTGTTCAAGATCACACGGACAAACCAAAGAGTaGGTCATGTCGGTTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: APFYRKSGVLEVTCSRSHGQTKE*VMSVPQ Trigger: TTGTGGAACCGACATGACCCACTCTTTGGTTTGTCC...GTGTGATCTTGAACACGTGACCTCTAGGACTCCACTTTTTCTGTAAAATGGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000538165.2 |
||
| CDS TCA 90 bp | TGGAGAAGCCACCCTGAAACTGGATCTGCAGCTGGGAGACACGGATaGGCTGGGGAAACTCCAGCGTCACCCACTGGGAGGGGCCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: WRSHPETGSAAGRHG*AGETPASPTGRGPG Trigger: ACCAGGGCCCCTCCCAGTGGGTGACGCTGGAGTTTCCCCAGCTCATCCGTGTCTCCCAGCTGCAGATCCAGTTTCAGGGTGGCTTCTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000331552.12 ENST00000420605.7 ENST00000537399.1 ENST00000538165.2 ENST00000539693.1 |
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| CDS-3UTR CAA 90 bp | GGGCAACCTGGGGAAGCTGCAGGTCCCTCTAAGCCTCTCACACAGAACAGGTGGGGGGGCGGTGGCTTTTaGTGCGAGGCTGTTTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GQPGEAAGPSKPLTQNRWGGGGF*CEAVSL Trigger: CAGAGAAACAGCCTCGCACAAAAAGCCACCGCCCCC...CCACCTGTTCTGTGTGAGAGGCTTAGAGGGACCTGCAGCTTCCCCAGGTTGCCC 61% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000538165.2 |
||
| CDS GCA 90 bp | GATCTGTCCACTGAGGGCTCGACCCCAGGCTTAGGGCCTCGCCACTaGCTGTCCCCACAGACTCTTACCTGCTCACTGTCTCTGGACAAA | + |
|
Preference number: 5 (lower is better) Translates to: DLSTEGSTPGLGPRH*LSPQTLTCSLSLDK Trigger: TTTGTCCAGAGACAGTGAGCAGGTAAGAGTCTGTGGGGACAGGCAGTGGCGAGGCCCTAAGCCTGGGGTCGAGCCCTCAGTGGACAGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000539693.1 |
||
| CDS CCA 90 bp | CCTGAGTGCCCTGTGAACCTTCAGCAGAGAAAGGCAATGAGTGTCTaGGGTGACCCCTGGAACCCCTGCCACCCAGGGCCTTCTAGTACC | + |
|
Preference number: 5 (lower is better) Translates to: PECPVNLQQRKAMSV*GDPWNPCHPGPSST Trigger: GGTACTAGAAGGCCCTGGGTGGCAGGGGTTCCAGGGGTCACCCCAGACACTCATTGCCTTTCTCTGCTGAAGGTTCACAGGGCACTCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537399.1 |
||
| CDS-3UTR CAA 90 bp | GGGCAACCTGGGGAAGCTGCAGGTCCCTCTAAGCCTCTCACACAGAACAGGTGGCCAAACTGCCGAGTGTaGCGATTCAGCACTGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: GQPGEAAGPSKPLTQNRWPNCRV*RFSTEL Trigger: GAGTTCAGTGCTGAATCGCAACACTCGGCAGTTTGG...CCACCTGTTCTGTGTGAGAGGCTTAGAGGGACCTGCAGCTTCCCCAGGTTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538165.2 |
||
| CDS-3UTR CAA 90 bp | GTGGGCAACCTGGGGAAGCTGCAGGTCCCTCTAAGCCTCTCACACAGAACAGGTGGTTCCCATTCGGGTTaGGGTGAGTCCAAAGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: VGNLGKLQVPLSLSHRTGGSHSG*GESKAS Trigger: GGAAGCTTTGGACTCACCCAAACCCGAATGGGAACC...ACCTGTTCTGTGTGAGAGGCTTAGAGGGACCTGCAGCTTCCCCAGGTTGCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538165.2 ENST00000539678.1 |
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| CDS CCA 90 bp | CAGGCCTTTCACAGGAAACAGATTTCCCGCGGGTTTCGGGGGCGGTaGCTTTTTGTGCGAGGCTGTTTCTCTGCGAATAGCTCTTGGAGC | + |
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Preference number: 5 (lower is better) Translates to: QAFHRKQISRGFRGR*LFVRGCFSANSSWS Trigger: GCTCCAAGAGCTATTCGCAGAGAAACAGCCTCGCACAAAAAGCCACCGCCCCCGAAACCCGCGGGAAATCTGTTTCCTGTGAAAGGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000539693.1 |
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| CDS CCA 90 bp | AGTGGCATCCTCAAACGTCACCTTCAGCCGGTCCACTTCAGCAGCTaGTATGGGGAAAGTGTGAGCGTGGGCAGTCAAGGGAAACTGGTG | + |
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Preference number: 5 (lower is better) Translates to: SGILKRHLQPVHFSS*YGESVSVGSQGKLV Trigger: CACCAGTTTCCCTTGACTGCCCACGCTCACACTTTCCCCATACCAGCTGCTGAAGTGGACCGGCTGAAGGTGACGTTTGAGGATGCCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537399.1 |
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| CDS CCA 90 bp | AGTGGCATCCTCAAACGTCACCTTCAGCCGGTCCACTTCAGCAGCTaGTATGGGGAAAGTGTGAGCCTGAAGCGAGTTGTTGTCCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: SGILKRHLQPVHFSS*YGESVSLKRVVVLR Trigger: CCTGAGGACAACAACTCGCTTCAGGCTCACACTTTCCCCATACCAGCTGCTGAAGTGGACCGGCTGAAGGTGACGTTTGAGGATGCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539693.1 |
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| CDS-3UTR CAA 90 bp | CACTCAGGGAACAAAATGGTCAGCCAGAGCTGGGGAAACCCAGAACTGACTTCAGGGGGCGGTGGCTTTTaGTGCGAGGCTGTTTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: HSGNKMVSQSWGNPELTSGGGGF*CEAVSL Trigger: CAGAGAAACAGCCTCGCACAAAAAGCCACCGCCCCC...TGAAGTCAGTTCTGGGTTTCCCCAGCTCTGGCTGACCATTTTGTTCCCTGAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| CDS-3UTR CAA 90 bp | GAACAAAATGGTCAGCCAGAGCTGGGGAAACCCAGAACTGACTTCAAAGGCAGCTGCAAGGGTCCCTGTTaGTCCCCTAAGGGGAGAGCG | + |
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Preference number: 5 (lower is better) Translates to: EQNGQPELGKPRTDFKGSCKGPC*SPKGRA Trigger: CGCTCTCCCCTTAGGGGACAAACAGGGACCCTTGCA...GCTGCCTTTGAAGTCAGTTCTGGGTTTCCCCAGCTCTGGCTGACCATTTTGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000331552.12 |
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| CDS CCA 90 bp | AGCACTGAACTCACCCTGCTCACTGTCTCTGGACAAACCAAAGAGTaGGTCATGTCGGTTCCACAAGACCTCGCAGGGCTTAGGATTGGG | + |
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Preference number: 5 (lower is better) Translates to: STELTLLTVSGQTKE*VMSVPQDLAGLRIG Trigger: CCCAATCCTAAGCCCTGCGAGGTCTTGTGGAACCGACATGACCCACTCTTTGGTTTGTCCAGAGACAGTGAGCAGGGTGAGTTCAGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000331552.12 ENST00000420605.7 ENST00000537399.1 ENST00000538165.2 ENST00000544883.5 |
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| CDS CCA 90 bp | CCCACAGACTCTTACCTGCTCACTGTCTCTGGACAAACCAAAGAGTaGGTCATGTCGGTTCCACAAGACCTCGCAGGGCTTAGGATTGGG | + |
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Preference number: 5 (lower is better) Translates to: PTDSYLLTVSGQTKE*VMSVPQDLAGLRIG Trigger: CCCAATCCTAAGCCCTGCGAGGTCTTGTGGAACCGACATGACCCACTCTTTGGTTTGTCCAGAGACAGTGAGCAGGTAAGAGTCTGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539693.1 |
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| CDS-3UTR CAA 90 bp | CCTAGAGGTCACGTGTTCAAGATCACACATCAGGGTTCCCATTCGGGTTTGGGTGGTTCCCATTCGGGTTaGGGTGAGTCCAAAGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: PRGHVFKITHQGSHSGLGGSHSG*GESKAS Trigger: GGAAGCTTTGGACTCACCCAAACCCGAATGGGAACC...ACCCAAACCCGAATGGGAACCCTGATGTGTGATCTTGAACACGTGACCTCTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539678.1 |
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| CDS-3UTR CAA 90 bp | CATCTCAGTGCAACAGGTGATCGAGAACCACATCCTCAAGCTCTTCCAGAGCAACCAAACTGCCGAGTGTaGCGATTCAGCACTGAACTC | + |
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Preference number: 5 (lower is better) Translates to: HLSATGDREPHPQALPEQPNCRV*RFSTEL Trigger: GAGTTCAGTGCTGAATCGCAACACTCGGCAGTTTGG...TTGCTCTGGAAGAGCTTGAGGATGTGGTTCTCGATCACCTGTTGCACTGAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| CDS GCA 90 bp | TGTTGTCCTCAGGGTAGAAATCTACAATCTTGTGGAGAGCCTGAGTaGCCTGTGAACCTTCAGCAGAGAAAGGCAATGAGTGTCTGGGGT | + |
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Preference number: 5 (lower is better) Translates to: CCPQGRNLQSCGEPE*PVNLQQRKAMSVWG Trigger: ACCCCAGACACTCATTGCCTTTCTCTGCTGAAGGTTCACAGGGCACTCAGGCTCTCCACAAGATTGTAGATTTCTACCCTGAGGACAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537399.1 |
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| CDS-3UTR CAA 90 bp | CCTTCCCAAGAGGAACCAATAAACCTTCTGTGCAGAATGAGGGACTTTGCTGTGCCAAACTGCCGAGTGTaGCGATTCAGCACTGAACTC | + |
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Preference number: 5 (lower is better) Translates to: PSQEEPINLLCRMRDFAVPNCRV*RFSTEL Trigger: GAGTTCAGTGCTGAATCGCAACACTCGGCAGTTTGG...CACAGCAAAGTCCCTCATTCTGCACAGAAGGTTTATTGGTTCCTCTTGGGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000544883.5 |
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| CDS CCA 72 bp | GAGTGCCCTGTGAACCTTCCAGGCAGCCCCGGCGACTaGAGAAGCCACCCTGAAACTGGATCTGCAGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: ECPVNLPGSPGD*RSHPETGSAAG Trigger: CCCAGCTGCAGATCCAGTTTCAGGGTGGCTTCTCCAGTCGCCGGGGCTGCCTGGAAGGTTCACAGGGCACTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000331552.12 ENST00000420605.7 ENST00000538165.2 ENST00000539693.1 |
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| CDS CAA 90 bp | TGTCGGTTCCACAAGACCTCGCAGGGCTTAGGATTGGGCACAGCCTaGGTTCGAATCCCGGCGCCTCCTCAAGCTACAGGGCGGCGCGAT | + |
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Preference number: 6 (lower is better) Translates to: CRFHKTSQGLGLGTA*VRIPAPPQATGRRD Trigger: ATCGCGCCGCCCTGTAGCTTGAGGAGGCGCCGGGATTCGAACCAAGGCTGTGCCCAATCCTAAGCCCTGCGAGGTCTTGTGGAACCGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000331552.12 ENST00000420605.7 ENST00000537399.1 ENST00000538165.2 ENST00000539693.1 ENST00000544883.5 |
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| CDS CAA 72 bp | TCATGTCGGTTCCACAAGACCTCGCAGGGCTTAGGATaGGGCACAGCCTTGGTTCGAATCCCGGCGCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SCRFHKTSQGLG*GTALVRIPAPP Trigger: AGGAGGCGCCGGGATTCGAACCAAGGCTGTGCCCAATCCTAAGCCCTGCGAGGTCTTGTGGAACCGACATGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000331552.12 ENST00000420605.7 ENST00000537399.1 ENST00000538165.2 ENST00000539693.1 ENST00000544883.5 |
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| CDS CAA 90 bp | AAGAGTGGGTCATGTCGGTTCCACAAGACCTCGCAGGGCTTAGGATaGGGCACAGCCTTGGTTCGAATCCCGGCGCCTCCTCAAGCTACA | + |
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Preference number: 6 (lower is better) Translates to: KSGSCRFHKTSQGLG*GTALVRIPAPPQAT Trigger: TGTAGCTTGAGGAGGCGCCGGGATTCGAACCAAGGCTGTGCCCAATCCTAAGCCCTGCGAGGTCTTGTGGAACCGACATGACCCACTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000331552.12 ENST00000420605.7 ENST00000537399.1 ENST00000538165.2 ENST00000539693.1 ENST00000544883.5 |
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| CDS CCA 72 bp | CTCAAACGTCACCTTCAGCCGGTCCACTTCAGCAGCTaGTATGGGGAAAGTGTGAGCGTGGGCAGTCAAGGG | + |
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Preference number: 6 (lower is better) Translates to: LKRHLQPVHFSS*YGESVSVGSQG Trigger: CCCTTGACTGCCCACGCTCACACTTTCCCCATACCAGCTGCTGAAGTGGACCGGCTGAAGGTGACGTTTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537399.1 |
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| CDS CCA 72 bp | CACAGGAAACAGATTTCCCGCGGGTTTCGGGGGCGGTaGCTTTTTGTGCGAGGCTGTTTCTCTGCGAATAGC | + |
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Preference number: 6 (lower is better) Translates to: HRKQISRGFRGR*LFVRGCFSANS Trigger: GCTATTCGCAGAGAAACAGCCTCGCACAAAAAGCCACCGCCCCCGAAACCCGCGGGAAATCTGTTTCCTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000539693.1 |
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| CDS CCA 72 bp | CTCACCCTGCTCACTGTCTCTGGACAAACCAAAGAGTaGGTCATGTCGGTTCCACAAGACCTCGCAGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: LTLLTVSGQTKE*VMSVPQDLAGL Trigger: AAGCCCTGCGAGGTCTTGTGGAACCGACATGACCCACTCTTTGGTTTGTCCAGAGACAGTGAGCAGGGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000331552.12 ENST00000420605.7 ENST00000537399.1 ENST00000538165.2 ENST00000544883.5 |
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| CDS CAA 72 bp | AACAGATTTCCCGCGGGTTTCGGGGGCGGTGGCTTTTaGTGCGAGGCTGTTTCTCTGCGAATAGCTCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: NRFPAGFGGGGF*CEAVSLRIALG Trigger: TCCAAGAGCTATTCGCAGAGAAACAGCCTCGCACAAAAAGCCACCGCCCCCGAAACCCGCGGGAAATCTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000539693.1 |
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| CDS CCA 72 bp | CTCAAACGTCACCTTCAGCCGGTCCACTTCAGCAGCTaGTATGGGGAAAGTGTGAGCCTGAAGCGAGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: LKRHLQPVHFSS*YGESVSLKRVV Trigger: AACAACTCGCTTCAGGCTCACACTTTCCCCATACCAGCTGCTGAAGTGGACCGGCTGAAGGTGACGTTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539693.1 |
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| CDS CAA 90 bp | TTCACAGGAAACAGATTTCCCGCGGGTTTCGGGGGCGGTGGCTTTTaGTGCGAGGCTGTTTCTCTGCGAATAGCTCTTGGAGCCAAATCT | + |
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Preference number: 6 (lower is better) Translates to: FTGNRFPAGFGGGGF*CEAVSLRIALGAKS Trigger: AGATTTGGCTCCAAGAGCTATTCGCAGAGAAACAGCCTCGCACAAAAAGCCACCGCCCCCGAAACCCGCGGGAAATCTGTTTCCTGTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000331552.12 ENST00000539693.1 |
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| CDS GCA 72 bp | GGAAAATTTGGGAGAGAGGATCAGGGAAACCGCCAATaGCCGGAGGCCAGGCCTTTCACAGGAAACAGATTT | + |
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Preference number: 6 (lower is better) Translates to: GKFGREDQGNRQ*PEARPFTGNRF Trigger: AAATCTGTTTCCTGTGAAAGGCCTGGCCTCCGGGCATTGGCGGTTTCCCTGATCCTCTCTCCCAAATTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000331552.12 ENST00000420605.7 ENST00000537399.1 ENST00000538165.2 ENST00000539693.1 ENST00000544883.5 |
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| CDS CCA 72 bp | TCTTACCTGCTCACTGTCTCTGGACAAACCAAAGAGTaGGTCATGTCGGTTCCACAAGACCTCGCAGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: SYLLTVSGQTKE*VMSVPQDLAGL Trigger: AAGCCCTGCGAGGTCTTGTGGAACCGACATGACCCACTCTTTGGTTTGTCCAGAGACAGTGAGCAGGTAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539693.1 |
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| CDS GCA 72 bp | CAGGGTAGAAATCTACAATCTTGTGGAGAGCCTGAGTaGCCTGTGAACCTTCAGCAGAGAAAGGCAATGAGT | + |
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Preference number: 6 (lower is better) Translates to: QGRNLQSCGEPE*PVNLQQRKAMS Trigger: ACTCATTGCCTTTCTCTGCTGAAGGTTCACAGGGCACTCAGGCTCTCCACAAGATTGTAGATTTCTACCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537399.1 |
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