RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NR1I2 (Homo sapiens)

Ensembl gene IDs: ENSG00000144852

Ensembl transcript IDs: ENST00000337940.4, ENST00000393716.8, ENST00000466380.6, ENST00000474090.1, ENST00000493757.1

Found 482 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGGAATTCCCTAGGGAGACAGGCCAGCAGGGCATTGTCGGCTCTTaGCAGTGTCCATCTGTCTTGGCCCGGGAGTGGCGGCTCAGAGGG +
Preference number: 1 (lower is better)
Translates to: QEFPRETGQQGIVGS*QCPSVLAREWRLRG
Trigger: CCCTCTGAGCCGCCACTCCCGGGCCAAGACAGATGGACACTGCCAAGAGCCGACAATGCCCTGCTGGCCTGTCTCCCTAGGGAATTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR TCA 90 bp CTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCTGCCGATaGGTACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGG +
Preference number: 1 (lower is better)
Translates to: LISLEDSHRYSCACR*VQAWSPQSSSEEEG
Trigger: CCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTACTCATCGGCAGGCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR CCA 90 bp TTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCACTTaGGTACCCAGTGCCCGCCATCACAGCTCAGCATCCACACAGGGA +
Preference number: 1 (lower is better)
Translates to: LCPCSYRLMSLGTFT*VPSARHHSSASTQG
Trigger: TCCCTGTGTGGATGCTGAGCTGTGATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR CCA 90 bp CTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTaGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCACAGCTCAG +
Preference number: 1 (lower is better)
Translates to: LTAAVCALAPTDSCP*EPSLGYPVPAITAQ
Trigger: CTGAGCTGTGATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR CCA 90 bp CAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAACGAGTaGGAAGTGGGAGACAGGACTATTAGAGGTAGCAATGAAAAGACT +
Preference number: 1 (lower is better)
Translates to: QAWSPQSSSEEEGNE*EVGDRTIRGSNEKT
Trigger: AGTCTTTTCATTGCTACCTCTAATAGTCCTGTCTCCCACTTCCCACTCGTTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR CCA 90 bp ATACCCAGCATTCCAGCCCCAGGAACAAACCCAGGCCCCATCAAGTaGCAAACAGACCTACCTACACCAAATCACACACACGCACTCACA +
Preference number: 1 (lower is better)
Translates to: IPSIPAPGTNPGPIK*QTDLPTPNHTHALT
Trigger: TGTGAGTGCGTGTGTGTGATTTGGTGTAGGTAGGTCTGTTTGCCACTTGATGGGGCCTGGGTTTGTTCCTGGGGCTGGAATGCTGGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR GCA 90 bp TACACCAAATCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTaGTCCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCC +
Preference number: 1 (lower is better)
Translates to: YTKSHTRTHSCSLCP*SYRLMSLGTFTWVP
Trigger: GGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGATTTGGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR GCA 90 bp CCTACCTACACCAAATCACACACACGCACTCACAGCTGCAGTTTGTaGCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCACTTGG +
Preference number: 1 (lower is better)
Translates to: PTYTKSHTRTHSCSL*PCSYRLMSLGTFTW
Trigger: CCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGATTTGGTGTAGGTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR GCA 90 bp GCAAACAGACCTACCTACACCAAATCACACACACGCACTCACAGCTaGAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACC +
Preference number: 1 (lower is better)
Translates to: ANRPTYTKSHTRTHS*SLCPCSYRLMSLGT
Trigger: GGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGATTTGGTGTAGGTAGGTCTGTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CCA 90 bp TACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAACGAGTGGGAAGCGGCTCAGAGGGCTCTaGGTCTGGCTGCCTCTCGGA +
Preference number: 2 (lower is better)
Translates to: YRPGAHKAARKRRGTSGKRLRGL*VWLPLG
Trigger: TCCGAGAGGCAGCCAGACCCAGAGCCCTCTGAGCCG...CTTCCCACTCGTTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CCA 90 bp GCAGGCCTCCTGGCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCGTCTTGGCCCGGGAGTaGCGGCTCAGAGGGCTCTGG +
Preference number: 2 (lower is better)
Translates to: AGLLASHLSRGLPQILMRVLARE*RLRGLW
Trigger: CCAGAGCCCTCTGAGCCGCCACTCCCGGGCCAAGAC...GCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGCCAGGAGGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR GCA 90 bp CCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCGGCTCTGGGTCTGGCTaGCTCTCGGAGGTGTCACCC +
Preference number: 2 (lower is better)
Translates to: PTDSCPWEPSLGYPVPAIGSGSG*LSEVSP
Trigger: GGGTGACACCTCCGAGAGGCAGCCAGACCCAGAGCC...GATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR GCA 90 bp GCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGGGCTCTGGGTCTGGCTaGCTCTCGGAGGTGTCACCC +
Preference number: 2 (lower is better)
Translates to: ALAPTDSCPWEPSLGYPVGSGSG*LSEVSP
Trigger: GGGTGACACCTCCGAGAGGCAGCCAGACCCAGAGCC...CACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CCA 90 bp CACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCGGCTCAGAGGGCTCTaGGTCTGGCTGCCTCTCGGA +
Preference number: 2 (lower is better)
Translates to: HSQLQFVPLLLQTHVLGNRLRGL*VWLPLG
Trigger: TCCGAGAGGCAGCCAGACCCAGAGCCCTCTGAGCCG...GTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CCA 90 bp CTGCCGATGAGTACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAACCATCCTTGGTCGCTTaGTCCCTTCCACACCTTGAC +
Preference number: 2 (lower is better)
Translates to: LPMSTGLEPTKQLGRGGEPSLVA*SLPHLD
Trigger: GTCAAGGTGTGGAAGGGACCAAGCGACCAAGGATGG...TTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTACTCATCGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CCA 90 bp TACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAACGAGTGGGAAGCCATCCTTGGTCGCTTaGTCCCTTCCACACCTTGAC +
Preference number: 2 (lower is better)
Translates to: YRPGAHKAARKRRGTSGKPSLVA*SLPHLD
Trigger: GTCAAGGTGTGGAAGGGACCAAGCGACCAAGGATGG...CTTCCCACTCGTTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CCA 90 bp CTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCACAGCTCAGCATCCACCAGATGGCCCATCCTTaGTCGCTTGGTCCCTTCCAC +
Preference number: 2 (lower is better)
Translates to: LGNLHLGTQCPPSQLSIHQMAHP*SLGPFH
Trigger: GTGGAAGGGACCAAGCGACCAAGGATGGGCCATCTG...GTGGATGCTGAGCTGTGATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR TCA 90 bp CACCAAATCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGTCATGCGCCTGCCGATaGGTACAGGCCTGGAGCCCA +
Preference number: 2 (lower is better)
Translates to: HQITHTHSQLQFVPLLLQSCACR*VQAWSP
Trigger: TGGGCTCCAGGCCTGTACTCATCGGCAGGCGCATGA...CTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGATTTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CCA 90 bp AGCAATGAAAAGACTCAGGAAGCGAACAAACGTGGGTATGTGGGCATAGACCCCGTCTTGGCCCGGGAGTaGCGGCTCAGAGGGCTCTGG +
Preference number: 2 (lower is better)
Translates to: SNEKTQEANKRGYVGIDPVLARE*RLRGLW
Trigger: CCAGAGCCCTCTGAGCCGCCACTCCCGGGCCAAGAC...GGGGTCTATGCCCACATACCCACGTTTGTTCGCTTCCTGAGTCTTTTCATTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CCA 90 bp GCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGAGTGTCCATCTGTCTTaGCCCGGGAGTGGCGGCTCA +
Preference number: 2 (lower is better)
Translates to: ALAPTDSCPWEPSLGYPVSVHLS*PGSGGS
Trigger: TGAGCCGCCACTCCCGGGCCAAGACAGATGGACACT...CACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CCA 90 bp CCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCCAGATGGCCCATCCTTaGTCGCTTGGTCCCTTCCAC +
Preference number: 2 (lower is better)
Translates to: PTDSCPWEPSLGYPVPAIQMAHP*SLGPFH
Trigger: GTGGAAGGGACCAAGCGACCAAGGATGGGCCATCTG...GATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CCA 90 bp GCAGGCCTCCTGGCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCGAGGAGGGGAACGAGTaGGAAGTGGGAGACAGGACT +
Preference number: 2 (lower is better)
Translates to: AGLLASHLSRGLPQILMREEGNE*EVGDRT
Trigger: AGTCCTGTCTCCCACTTCCCACTCGTTCCCCTCCTC...GCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGCCAGGAGGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR CAA 90 bp TTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCACTaGGGTACCCAGTGCCCGCCATCACAGCTCAGCATCCACACAGGG +
Preference number: 2 (lower is better)
Translates to: FVPLLLQTHVLGNLH*GTQCPPSQLSIHTG
Trigger: CCCTGTGTGGATGCTGAGCTGTGATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR TCA 90 bp CCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCCACCCATGTCCTTCCTaGGGAATGCTAGCCAGCTGT +
Preference number: 2 (lower is better)
Translates to: PTDSCPWEPSLGYPVPAIHPCPS*GMLASC
Trigger: ACAGCTGGCTAGCATTCCTCAGGAAGGACATGGGTG...GATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR TCA 90 bp GTATGTGGGCATAGACCCCAGATGGCCCATCCTTGGTCGCTTGGTCCCTTCCACCACTTTAGTGGGATCTaGGGGATTTCTCCCCAGACC +
Preference number: 2 (lower is better)
Translates to: VCGHRPQMAHPWSLGPFHHFSGI*GISPQT
Trigger: GGTCTGGGGAGAAATCCCTCAGATCCCACTAAAGTG...GTGGAAGGGACCAAGCGACCAAGGATGGGCCATCTGGGGTCTATGCCCACATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR GCA 90 bp CACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCACTTGGGTACCCAGTaGCCGCCATCACAGCTCAGC +
Preference number: 2 (lower is better)
Translates to: HSQLQFVPLLLQTHVLGNHLGTQ*PPSQLS
Trigger: GCTGAGCTGTGATGGCGGGCACTGGGTACCCAAGTG...GTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CCA 90 bp CACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCAGTGTCCATCTGTCTTaGCCCGGGAGTGGCGGCTCA +
Preference number: 2 (lower is better)
Translates to: HSCSLCPCSYRLMSLGTFSVHLS*PGSGGS
Trigger: TGAGCCGCCACTCCCGGGCCAAGACAGATGGACACT...GAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CCA 90 bp GTATGTGGGCATAGACCCCAGATGGCCCATCCTTGGTCGCTTGGTCCCTTCCACGGCATTGTCGGCTCTTaGCAGTGTCCATCTGTCTTG +
Preference number: 2 (lower is better)
Translates to: VCGHRPQMAHPWSLGPFHGIVGS*QCPSVL
Trigger: CAAGACAGATGGACACTGCCAAGAGCCGACAATGCC...GTGGAAGGGACCAAGCGACCAAGGATGGGCCATCTGGGGTCTATGCCCACATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CCA 90 bp GCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGGGCATAGACCCCAGATaGCCCATCCTTGGTCGCTTG +
Preference number: 2 (lower is better)
Translates to: ALAPTDSCPWEPSLGYPVGIDPR*PILGRL
Trigger: CAAGCGACCAAGGATGGGCCATCTGGGGTCTATGCC...CACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR CAA 90 bp ACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTaGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCACAGCTCA +
Preference number: 2 (lower is better)
Translates to: THSCSLCPCSYRLMS*GTFTWVPSARHHSS
Trigger: TGAGCTGTGATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR TCA 90 bp CCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCCACTTTAGTGGGATCTaGGGGATTTCTCCCCAGACC +
Preference number: 2 (lower is better)
Translates to: PTDSCPWEPSLGYPVPAIHFSGI*GISPQT
Trigger: GGTCTGGGGAGAAATCCCTCAGATCCCACTAAAGTG...GATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR TCA 90 bp CCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCTGCAGAGACACAGAATaGTGTGGCCGGAATGAGGTC +
Preference number: 2 (lower is better)
Translates to: PTDSCPWEPSLGYPVPAICRDTE*CGRNEV
Trigger: GACCTCATTCCGGCCACATCATTCTGTGTCTCTGCA...GATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CCA 90 bp CACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCAGATGGCCCATCCTTaGTCGCTTGGTCCCTTCCAC +
Preference number: 2 (lower is better)
Translates to: HSQLQFVPLLLQTHVLGNQMAHP*SLGPFH
Trigger: GTGGAAGGGACCAAGCGACCAAGGATGGGCCATCTG...GTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CCA 90 bp GCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCTGCCGATGAGTGGCATAGACCCCAGATaGCCCATCCTTGGTCGCTTG +
Preference number: 2 (lower is better)
Translates to: ASHLSRGLPQILMRLPMSGIDPR*PILGRL
Trigger: CAAGCGACCAAGGATGGGCCATCTGGGGTCTATGCC...ACTCATCGGCAGGCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CCA 90 bp GCAGGCCTCCTGGCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCGGAAGCGAACAAACGTaGGTATGTGGGCATAGACCC +
Preference number: 2 (lower is better)
Translates to: AGLLASHLSRGLPQILMRGSEQT*VCGHRP
Trigger: GGGTCTATGCCCACATACCCACGTTTGTTCGCTTCC...GCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGCCAGGAGGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CCA 90 bp CACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACGAGGAGGGGAACGAGTaGGAAGTGGGAGACAGGACT +
Preference number: 2 (lower is better)
Translates to: HSQLQFVPLLLQTHVLGNEEGNE*EVGDRT
Trigger: AGTCCTGTCTCCCACTTCCCACTCGTTCCCCTCCTC...GTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CCA 90 bp CCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCTTGGTGCAGGCCTCCTaGCTTCTCATCTCTCTAGAG +
Preference number: 2 (lower is better)
Translates to: PTDSCPWEPSLGYPVPAILVQAS*LLISLE
Trigger: CTCTAGAGAGATGAGAAGCCAGGAGGCCTGCACCAA...GATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR TCA 90 bp GCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCTGCCGATGAGTCACCCATGTCCTTCCTaGGGAATGCTAGCCAGCTGT +
Preference number: 2 (lower is better)
Translates to: ASHLSRGLPQILMRLPMSHPCPS*GMLASC
Trigger: ACAGCTGGCTAGCATTCCTCAGGAAGGACATGGGTG...ACTCATCGGCAGGCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR TCA 90 bp CACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCACCCATGTCCTTCCTaGGGAATGCTAGCCAGCTGT +
Preference number: 2 (lower is better)
Translates to: HSQLQFVPLLLQTHVLGNHPCPS*GMLASC
Trigger: ACAGCTGGCTAGCATTCCTCAGGAAGGACATGGGTG...GTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR TCA 90 bp CACCAAATCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGGTCATGCCAAGCTTCTaGCATTTGGTGCAGGCCTCC +
Preference number: 2 (lower is better)
Translates to: HQITHTHSQLQFVPLLLQVMPSF*HLVQAS
Trigger: GGAGGCCTGCACCAAATGTCAGAAGCTTGGCATGAC...CTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGATTTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CCA 90 bp CCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCGGAACGAGTGGGAAGTaGGAGACAGGACTATTAGAG +
Preference number: 2 (lower is better)
Translates to: PTDSCPWEPSLGYPVPAIGTSGK*ETGLLE
Trigger: CTCTAATAGTCCTGTCTCCCACTTCCCACTCGTTCC...GATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR TCA 90 bp CACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACATGATGTGGCCGGAATaGGGTCATGCCAAGCTTCTG +
Preference number: 2 (lower is better)
Translates to: HSQLQFVPLLLQTHVLGNMMWPE*GHAKLL
Trigger: CAGAAGCTTGGCATGACCTCATTCCGGCCACATCAT...GTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR GCA 90 bp GCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCTGCCGATGAGTAGGAAAGGGCAACCTTaGCTCTCTGATGGTCCTGAC +
Preference number: 2 (lower is better)
Translates to: ASHLSRGLPQILMRLPMSRKGQP*LSDGPD
Trigger: GTCAGGACCATCAGAGAGGCAAGGTTGCCCTTTCCT...ACTCATCGGCAGGCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CCA 90 bp GCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCCACGTAAGAGTCTGTaGCTTCACTCCCTACAGACT +
Preference number: 2 (lower is better)
Translates to: ALAPTDSCPWEPSLGYPVPRKSL*LHSLQT
Trigger: AGTCTGTAGGGAGTGAAGCCACAGACTCTTACGTGG...CACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CCA 90 bp CACCAAATCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGTTGGTGCAGGCCTCCTaGCTTCTCATCTCTCTAGAG +
Preference number: 2 (lower is better)
Translates to: HQITHTHSQLQFVPLLLQLVQAS*LLISLE
Trigger: CTCTAGAGAGATGAGAAGCCAGGAGGCCTGCACCAA...CTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGATTTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CCA 90 bp CACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCAAGCTTCTGACATTTaGTGCAGGCCTCCTGGCTTC +
Preference number: 2 (lower is better)
Translates to: HSQLQFVPLLLQTHVLGNQASDI*CRPPGF
Trigger: GAAGCCAGGAGGCCTGCACCAAATGTCAGAAGCTTG...GTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR CAA 90 bp CTACACCAAATCACACACACGCACTCACAGCTGCAGTTTGTGCCCTaGCTCCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACC +
Preference number: 2 (lower is better)
Translates to: LHQITHTHSQLQFVP*LLQTHVLGNLHLGT
Trigger: GGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGATTTGGTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR GCA 90 bp TACTCACAAGTGGCTATAAACAAGGCAGGCACTTTCATACCCTTTAGCTTTGAGGGCTCTGGGTCTGGCTaGCTCTCGGAGGTGTCACCC +
Preference number: 2 (lower is better)
Translates to: YSQVAINKAGTFIPFSFEGSGSG*LSEVSP
Trigger: GGGTGACACCTCCGAGAGGCAGCCAGACCCAGAGCC...CTCAAAGCTAAAGGGTATGAAAGTGCCTGCCTTGTTTATAGCCACTTGTGAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CCA 90 bp CACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCCCACGTAAGAGTCTGTaGCTTCACTCCCTACAGACT +
Preference number: 2 (lower is better)
Translates to: HSCSLCPCSYRLMSLGTFPRKSL*LHSLQT
Trigger: AGTCTGTAGGGAGTGAAGCCACAGACTCTTACGTGG...GAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CCA 90 bp GCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCTGCCGATGAGTGGAACGAGTGGGAAGTaGGAGACAGGACTATTAGAG +
Preference number: 2 (lower is better)
Translates to: ASHLSRGLPQILMRLPMSGTSGK*ETGLLE
Trigger: CTCTAATAGTCCTGTCTCCCACTTCCCACTCGTTCC...ACTCATCGGCAGGCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR CAA 90 bp AGACCTACCTACACCAAATCACACACACGCACTCACAGCTGCAGTTaGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCACT +
Preference number: 2 (lower is better)
Translates to: RPTYTKSHTRTHSCS*CPCSYRLMSLGTFT
Trigger: AGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGATTTGGTGTAGGTAGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CCA 90 bp GATTTGACATTAAACCCAGGGCTACATTTCCCAAAACTAGTTCTTAGGTGTGGACGGCTCAGAGGGCTCTaGGTCTGGCTGCCTCTCGGA +
Preference number: 2 (lower is better)
Translates to: DLTLNPGLHFPKLVLRCGRLRGL*VWLPLG
Trigger: TCCGAGAGGCAGCCAGACCCAGAGCCCTCTGAGCCG...TCCACACCTAAGAACTAGTTTTGGGAAATGTAGCCCTGGGTTTAATGTCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR GCA 90 bp TACTCACAAGTGGCTATAAACAAGGCAGGCACTTTCATACCCTTTAGCTTTGAGACACGCACTCACAGCTaGAGTTTGTGCCCTTGCTCC +
Preference number: 2 (lower is better)
Translates to: YSQVAINKAGTFIPFSFETRTHS*SLCPCS
Trigger: GGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGT...CTCAAAGCTAAAGGGTATGAAAGTGCCTGCCTTGTTTATAGCCACTTGTGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR TCA 90 bp TACTCACAAGTGGCTATAAACAAGGCAGGCACTTTCATACCCTTTAGCTTTGAGTGCAGAGACACAGAATaGTGTGGCCGGAATGAGGTC +
Preference number: 2 (lower is better)
Translates to: YSQVAINKAGTFIPFSFECRDTE*CGRNEV
Trigger: GACCTCATTCCGGCCACATCATTCTGTGTCTCTGCA...CTCAAAGCTAAAGGGTATGAAAGTGCCTGCCTTGTTTATAGCCACTTGTGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CCA 90 bp TACTCACAAGTGGCTATAAACAAGGCAGGCACTTTCATACCCTTTAGCTTTGAGGGCATTGTCGGCTCTTaGCAGTGTCCATCTGTCTTG +
Preference number: 2 (lower is better)
Translates to: YSQVAINKAGTFIPFSFEGIVGS*QCPSVL
Trigger: CAAGACAGATGGACACTGCCAAGAGCCGACAATGCC...CTCAAAGCTAAAGGGTATGAAAGTGCCTGCCTTGTTTATAGCCACTTGTGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CCA 90 bp GCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGAATAATGTGTTCAAATaGATGCAGAGACACAGAATG +
Preference number: 2 (lower is better)
Translates to: ALAPTDSCPWEPSLGYPVNNVFK*MQRHRM
Trigger: CATTCTGTGTCTCTGCATCCATTTGAACACATTATT...CACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CCA 90 bp TACTCACAAGTGGCTATAAACAAGGCAGGCACTTTCATACCCTTTAGCTTTGAGCCAGGCCCCATCAAGTaGCAAACAGACCTACCTACA +
Preference number: 2 (lower is better)
Translates to: YSQVAINKAGTFIPFSFEPGPIK*QTDLPT
Trigger: TGTAGGTAGGTCTGTTTGCCACTTGATGGGGCCTGG...CTCAAAGCTAAAGGGTATGAAAGTGCCTGCCTTGTTTATAGCCACTTGTGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR GCA 90 bp GATTTGACATTAAACCCAGGGCTACATTTCCCAAAACTAGTTCTTAGGTGTGGAGGAAATTCCTTGTGCTaGTTTTGTCACTTATCATTT +
Preference number: 2 (lower is better)
Translates to: DLTLNPGLHFPKLVLRCGGNSLC*FCHLSF
Trigger: AAATGATAAGTGACAAAAGCAGCACAAGGAATTTCC...TCCACACCTAAGAACTAGTTTTGGGAAATGTAGCCCTGGGTTTAATGTCAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CAA 90 bp GGAAAGGGCAACCTTGCCTCTCTGATGGTCCTGACCTACAGGTCAGTGCACTCTCAGTGTCCATCTGTCTaGGCCCGGGAGTGGCGGCTC +
Preference number: 3 (lower is better)
Translates to: GKGNLASLMVLTYRSVHSQCPSV*AREWRL
Trigger: GAGCCGCCACTCCCGGGCCAAGACAGATGGACACTG...AGAGTGCACTGACCTGTAGGTCAGGACCATCAGAGAGGCAAGGTTGCCCTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CAA 90 bp CAGTGCACTCTCCACGTAAGAGTCTGTGGCTTCACTCCCTACAGACTGAACTGGCAGTGTCCATCTGTCTaGGCCCGGGAGTGGCGGCTC +
Preference number: 3 (lower is better)
Translates to: QCTLHVRVCGFTPYRLNWQCPSV*AREWRL
Trigger: GAGCCGCCACTCCCGGGCCAAGACAGATGGACACTG...CCAGTTCAGTCTGTAGGGAGTGAAGCCACAGACTCTTACGTGGAGAGTGCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CAA 90 bp TCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGCAGTGTCCATCTGTCTaGGCCCGGGAGTGGCGGCTC +
Preference number: 3 (lower is better)
Translates to: SHTRTHSCSLCPCSYRLMQCPSV*AREWRL
Trigger: GAGCCGCCACTCCCGGGCCAAGACAGATGGACACTG...CATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CAA 90 bp CAGTGCACTCTCCACGTAAGAGTCTGTGGCTTCACTCCCTACAGACTGAACTGGCAGGCCAGCAGGGCATaGTCGGCTCTTGGCAGTGTC +
Preference number: 3 (lower is better)
Translates to: QCTLHVRVCGFTPYRLNWQASRA*SALGSV
Trigger: GACACTGCCAAGAGCCGACAATGCCCTGCTGGCCTG...CCAGTTCAGTCTGTAGGGAGTGAAGCCACAGACTCTTACGTGGAGAGTGCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CAA 90 bp GCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCTGCCGATGAGTCAGGCCAGCAGGGCATaGTCGGCTCTTGGCAGTGTC +
Preference number: 3 (lower is better)
Translates to: ASHLSRGLPQILMRLPMSQASRA*SALGSV
Trigger: GACACTGCCAAGAGCCGACAATGCCCTGCTGGCCTG...ACTCATCGGCAGGCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CAA 90 bp CACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCCAGGCCAGCAGGGCATaGTCGGCTCTTGGCAGTGTC +
Preference number: 3 (lower is better)
Translates to: HSCSLCPCSYRLMSLGTFQASRA*SALGSV
Trigger: GACACTGCCAAGAGCCGACAATGCCCTGCTGGCCTG...GAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CAA 90 bp GCAGGCCTCCTGGCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCGGGCATTGTCGGCTCTaGGCAGTGTCCATCTGTCTT +
Preference number: 3 (lower is better)
Translates to: AGLLASHLSRGLPQILMRGHCRL*AVSICL
Trigger: AAGACAGATGGACACTGCCAAGAGCCGACAATGCCC...GCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGCCAGGAGGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CAA 90 bp CACCAAATCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGCCAGATGGCCCATCCTaGGTCGCTTGGTCCCTTCCA +
Preference number: 3 (lower is better)
Translates to: HQITHTHSQLQFVPLLLQPDGPS*VAWSLP
Trigger: TGGAAGGGACCAAGCGACCAAGGATGGGCCATCTGG...CTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGATTTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CAA 90 bp CACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCCAGATGGCCCATCCTaGGTCGCTTGGTCCCTTCCA +
Preference number: 3 (lower is better)
Translates to: HSQLQFVPLLLQTHVLGNPDGPS*VAWSLP
Trigger: TGGAAGGGACCAAGCGACCAAGGATGGGCCATCTGG...GTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR CCA 72 bp ACCTACAGGTCAGTGCACTCTCCACGTAAGAGTCTGTaGCTTCACTCCCTACAGACTGAACTGGGGGTGGGG +
Preference number: 3 (lower is better)
Translates to: TYRSVHSPRKSL*LHSLQTELGVG
Trigger: CCCCACCCCCAGTTCAGTCTGTAGGGAGTGAAGCCACAGACTCTTACGTGGAGAGTGCACTGACCTGTAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR CCA 72 bp TGCTCCTACAGACTCATGTCCTTGGGAACCTTCACTTaGGTACCCAGTGCCCGCCATCACAGCTCAGCATCC +
Preference number: 3 (lower is better)
Translates to: CSYRLMSLGTFT*VPSARHHSSAS
Trigger: GGATGCTGAGCTGTGATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR CCA 72 bp GCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTaGGAACCTTCACTTGGGTACCCAGTGCCCGCCATC +
Preference number: 3 (lower is better)
Translates to: AVCALAPTDSCP*EPSLGYPVPAI
Trigger: GATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CAA 90 bp CACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCGGGCATTGTCGGCTCTaGGCAGTGTCCATCTGTCTT +
Preference number: 3 (lower is better)
Translates to: HSCSLCPCSYRLMSLGTFGHCRL*AVSICL
Trigger: AAGACAGATGGACACTGCCAAGAGCCGACAATGCCC...GAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR CCA 72 bp AGCCCACAAAGCAGCTCGGAAGAGGAGGGGAACGAGTaGGAAGTGGGAGACAGGACTATTAGAGGTAGCAAT +
Preference number: 3 (lower is better)
Translates to: SPQSSSEEEGNE*EVGDRTIRGSN
Trigger: ATTGCTACCTCTAATAGTCCTGTCTCCCACTTCCCACTCGTTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR GCA 72 bp TCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTaGTCCTACAGACTCATGTCCTTGGGAACCTTCACT +
Preference number: 3 (lower is better)
Translates to: SHTRTHSCSLCP*SYRLMSLGTFT
Trigger: AGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR CCA 72 bp ATTCCAGCCCCAGGAACAAACCCAGGCCCCATCAAGTaGCAAACAGACCTACCTACACCAAATCACACACAC +
Preference number: 3 (lower is better)
Translates to: IPAPGTNPGPIK*QTDLPTPNHTH
Trigger: GTGTGTGTGATTTGGTGTAGGTAGGTCTGTTTGCCACTTGATGGGGCCTGGGTTTGTTCCTGGGGCTGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CAA 90 bp CACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCTTCCTTGTGCTGCTTTaGTCACTTATCATTTCTCCT +
Preference number: 3 (lower is better)
Translates to: HSCSLCPCSYRLMSLGTFFLVLL*SLIISP
Trigger: AGGAGAAATGATAAGTGACAAAAGCAGCACAAGGAA...GAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CAA 90 bp CACCAAATCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGTTCCTTGTGCTGCTTTaGTCACTTATCATTTCTCCT +
Preference number: 3 (lower is better)
Translates to: HQITHTHSQLQFVPLLLQFLVLL*SLIISP
Trigger: AGGAGAAATGATAAGTGACAAAAGCAGCACAAGGAA...CTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGATTTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CAA 90 bp TACTCACAAGTGGCTATAAACAAGGCAGGCACTTTCATACCCTTTAGCTTTGAGACTCACAGCTGCAGTTaGTGCCCTTGCTCCTACAGA +
Preference number: 3 (lower is better)
Translates to: YSQVAINKAGTFIPFSFETHSCS*CPCSYR
Trigger: TCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGT...CTCAAAGCTAAAGGGTATGAAAGTGCCTGCCTTGTTTATAGCCACTTGTGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CAA 90 bp TACTCACAAGTGGCTATAAACAAGGCAGGCACTTTCATACCCTTTAGCTTTGAGATTGTCAGCGTAGCCTaGTCACAGAGCATACCCAGC +
Preference number: 3 (lower is better)
Translates to: YSQVAINKAGTFIPFSFEIVSVA*SQSIPS
Trigger: GCTGGGTATGCTCTGTGACAAGGCTACGCTGACAAT...CTCAAAGCTAAAGGGTATGAAAGTGCCTGCCTTGTTTATAGCCACTTGTGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CAA 90 bp GATTTGACATTAAACCCAGGGCTACATTTCCCAAAACTAGTTCTTAGGTGTGGAATTGTCAGCGTAGCCTaGTCACAGAGCATACCCAGC +
Preference number: 3 (lower is better)
Translates to: DLTLNPGLHFPKLVLRCGIVSVA*SQSIPS
Trigger: GCTGGGTATGCTCTGTGACAAGGCTACGCTGACAAT...TCCACACCTAAGAACTAGTTTTGGGAAATGTAGCCCTGGGTTTAATGTCAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CAA 90 bp TACTCACAAGTGGCTATAAACAAGGCAGGCACTTTCATACCCTTTAGCTTTGAGTACAGACTCATGTCCTaGGGAACCTTCACTTGGGTA +
Preference number: 3 (lower is better)
Translates to: YSQVAINKAGTFIPFSFEYRLMS*GTFTWV
Trigger: TACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTA...CTCAAAGCTAAAGGGTATGAAAGTGCCTGCCTTGTTTATAGCCACTTGTGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR-3UTR CAA 90 bp GATTTGACATTAAACCCAGGGCTACATTTCCCAAAACTAGTTCTTAGGTGTGGATCATACCCTTTAGCTTaGAGAATAGATGTGTACACA +
Preference number: 3 (lower is better)
Translates to: DLTLNPGLHFPKLVLRCGSYPLA*RIDVYT
Trigger: TGTGTACACATCTATTCTCAAAGCTAAAGGGTATGA...TCCACACCTAAGAACTAGTTTTGGGAAATGTAGCCCTGGGTTTAATGTCAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp GTATGTGGGCATAGACCCCAGATGGCCCATCCTTGGTCGCTTGGTCCCTTCCACTGGTCCACCACGCGGTaGTGCAGCACACCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: VCGHRPQMAHPWSLGPFHWSTTR*CSTPGR
Trigger: CCGCCCAGGTGTGCTGCAGCACCGCGTGGTGGACCA...GTGGAAGGGACCAAGCGACCAAGGATGGGCCATCTGGGGTCTATGCCCACATAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CTGCCGATGAGTACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAACGGCTCAGAGGGCTCTaGGTCTGGCTGCCTCTCGGA +
Preference number: 4 (lower is better)
Translates to: LPMSTGLEPTKQLGRGGERLRGL*VWLPLG
Trigger: TCCGAGAGGCAGCCAGACCCAGAGCCCTCTGAGCCG...TTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTACTCATCGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp TACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAACGAGTGGGAAGTCATGCGCCTGCCGATaGGTACAGGCCTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: YRPGAHKAARKRRGTSGKSCACR*VQAWSP
Trigger: TGGGCTCCAGGCCTGTACTCATCGGCAGGCGCATGA...CTTCCCACTCGTTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp GCAGGCCTCCTGGCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCTGGTCCACCACGCGGTaGTGCAGCACACCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: AGLLASHLSRGLPQILMRWSTTR*CSTPGR
Trigger: CCGCCCAGGTGTGCTGCAGCACCGCGTGGTGGACCA...GCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGCCAGGAGGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp TACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAACGAGTGGGAAGCACACCTGGGCGGTCTaGGGAGAAGAGGGAGATGGC +
Preference number: 4 (lower is better)
Translates to: YRPGAHKAARKRRGTSGKHTWAV*GEEGDG
Trigger: GCCATCTCCCTCTTCTCCCCAGACCGCCCAGGTGTG...CTTCCCACTCGTTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCGTCTTGGCCCGGGAGTaGCGGCTCAGAGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PTDSCPWEPSLGYPVPAIVLARE*RLRGLW
Trigger: CCAGAGCCCTCTGAGCCGCCACTCCCGGGCCAAGAC...GATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp CACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCGCCGGGTCTTCCGGGTaGTCTCGCAGGCGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: HSCSLCPCSYRLMSLGTFAGSSG*SRRRPS
Trigger: GGAAGGGCGCCTGCGAGATCACCCGGAAGACCCGGC...GAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp CTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCACAGCTCAGCATCCACAGCCGCTGGGTGTGCTaGGCATTGATGCTGCGGAGC +
Preference number: 4 (lower is better)
Translates to: LGNLHLGTQCPPSQLSIHSRWVC*ALMLRS
Trigger: GCTCCGCAGCATCAATGCTCAGCACACCCAGCGGCT...GTGGATGCTGAGCTGTGATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp GCAGGCCTCCTGGCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCTCCACCACGCGGTGCTaGAGCACACCTGGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: AGLLASHLSRGLPQILMRSTTRC*STPGRS
Trigger: AGACCGCCCAGGTGTGCTGCAGCACCGCGTGGTGGA...GCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGCCAGGAGGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp CTGCCGATGAGTACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAAGGTGTATGTCCTGGATaGGCAGCAGCCGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: LPMSTGLEPTKQLGRGGEGVCPG*AAAAGC
Trigger: ACACCCAGCGGCTGCTGCGCATCCAGGACATACACC...TTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTACTCATCGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CAGTGCACTCTCCACGTAAGAGTCTGTGGCTTCACTCCCTACAGACTGAACTGGCGCAGGCGGCAGGCCTaGCACTGTCGCCGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: QCTLHVRVCGFTPYRLNWRRRQA*HCRRVF
Trigger: GAAGACCCGGCGACAGTGCCAGGCCTGCCGCCTGCG...CCAGTTCAGTCTGTAGGGAGTGAAGCCACAGACTCTTACGTGGAGAGTGCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCACAGCTCAGCATCCACCACACCTGGGCGGTCTaGGGAGAAGAGGGAGATGGC +
Preference number: 4 (lower is better)
Translates to: LGNLHLGTQCPPSQLSIHHTWAV*GEEGDG
Trigger: GCCATCTCCCTCTTCTCCCCAGACCGCCCAGGTGTG...GTGGATGCTGAGCTGTGATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CTGCCGATGAGTACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAAAATTGCTCCTGCAGCTaGTCCACCACGCGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LPMSTGLEPTKQLGRGGENCSCS*STTRCC
Trigger: GCAGCACCGCGTGGTGGACCAGCTGCAGGAGCAATT...TTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTACTCATCGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp TACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAACGAGTGGGAAGAAGGGGTGTATGTCCTaGATGCGCAGCAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: YRPGAHKAARKRRGTSGKKGCMS*MRSSRW
Trigger: CCAGCGGCTGCTGCGCATCCAGGACATACACCCCTT...CTTCCCACTCGTTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp CCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCAGCCGCTGGGTGTGCTaGGCATTGATGCTGCGGAGC +
Preference number: 4 (lower is better)
Translates to: PTDSCPWEPSLGYPVPAISRWVC*ALMLRS
Trigger: GCTCCGCAGCATCAATGCTCAGCACACCCAGCGGCT...GATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp TACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAACGAGTGGGAAGCTGATCATCATCCGCTaGTCCTCTGTCAGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: YRPGAHKAARKRRGTSGKLIIIR*SSVSPC
Trigger: GCAGGGGCTGACAGAGGAGCAGCGGATGATGATCAG...CTTCCCACTCGTTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp GCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGTCCACCACGCGGTGCTaGAGCACACCTGGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: ALAPTDSCPWEPSLGYPVSTTRC*STPGRS
Trigger: AGACCGCCCAGGTGTGCTGCAGCACCGCGTGGTGGA...CACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp CACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACTGGTCCACCACGCGGTaGTGCAGCACACCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: HSQLQFVPLLLQTHVLGNWSTTR*CSTPGR
Trigger: CCGCCCAGGTGTGCTGCAGCACCGCGTGGTGGACCA...GTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp CTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCACAGCTCAGCATCCACATGGCGAATTGCTCCTaGAGCTGGTCCACCACGCGG +
Preference number: 4 (lower is better)
Translates to: LGNLHLGTQCPPSQLSIHMANCS*SWSTTR
Trigger: CCGCGTGGTGGACCAGCTGCAGGAGCAATTCGCCAT...GTGGATGCTGAGCTGTGATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp GTATGTGGGCATAGACCCCAGATGGCCCATCCTTGGTCGCTTGGTCCCTTCCACCACTTGGGTACCCAGTaGCCGCCATCACAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: VCGHRPQMAHPWSLGPFHHLGTQ*PPSQLS
Trigger: GCTGAGCTGTGATGGCGGGCACTGGGTACCCAAGTG...GTGGAAGGGACCAAGCGACCAAGGATGGGCCATCTGGGGTCTATGCCCACATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCACAGCTCAGCATCCACGGCCTGCAGAGACTCTaGCAACTCGCAGCCACTGCT +
Preference number: 4 (lower is better)
Translates to: LGNLHLGTQCPPSQLSIHGLQRL*QLAATA
Trigger: AGCAGTGGCTGCGAGTTGCCAGAGTCTCTGCAGGCC...GTGGATGCTGAGCTGTGATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337940.4
ENST00000393716.8
CDS-3UTR TCA 90 bp AGCAATGAAAAGACTCAGGAAGCGAACAAACGTGGGTATGTGGGCATAGACCCCGCCGGGTCTTCCGGGTaGTCTCGCAGGCGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: SNEKTQEANKRGYVGIDPAGSSG*SRRRPS
Trigger: GGAAGGGCGCCTGCGAGATCACCCGGAAGACCCGGC...GGGGTCTATGCCCACATACCCACGTTTGTTCGCTTCCTGAGTCTTTTCATTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp TACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAACGAGTGGGAAGCACTTTTCTTCCGCTTaGTCAAGGCCCGCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: YRPGAHKAARKRRGTSGKHFSSA*SRPASP
Trigger: AGGAGAGGCGGGCCTTGATCAAGCGGAAGAAAAGTG...CTTCCCACTCGTTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp CTGCCGATGAGTACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAACACTTTTCTTCCGCTTaGTCAAGGCCCGCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LPMSTGLEPTKQLGRGGEHFSSA*SRPASP
Trigger: AGGAGAGGCGGGCCTTGATCAAGCGGAAGAAAAGTG...TTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTACTCATCGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp CTGCCGATGAGTACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAAGTCATGCCAAGCTTCTaGCATTTGGTGCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LPMSTGLEPTKQLGRGGEVMPSF*HLVQAS
Trigger: GGAGGCCTGCACCAAATGTCAGAAGCTTGGCATGAC...TTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTACTCATCGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp CTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCACAGCTCAGCATCCACCTGATCATCATCCGCTaGTCCTCTGTCAGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: LGNLHLGTQCPPSQLSIHLIIIR*SSVSPC
Trigger: GCAGGGGCTGACAGAGGAGCAGCGGATGATGATCAG...GTGGATGCTGAGCTGTGATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp TACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAACGAGTGGGAAGGGCTCCAGTAGAAGTTaGTGGAAGCCACCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: YRPGAHKAARKRRGTSGKGSSRS*WKPPAV
Trigger: CACTGCAGGTGGCTTCCAGCAACTTCTACTGGAGCC...CTTCCCACTCGTTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp CACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACTCCACCACGCGGTGCTaGAGCACACCTGGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: HSQLQFVPLLLQTHVLGNSTTRC*STPGRS
Trigger: AGACCGCCCAGGTGTGCTGCAGCACCGCGTGGTGGA...GTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp GCAGGCCTCCTGGCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCGGTGTATGTCCTGGATaGGCAGCAGCCGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: AGLLASHLSRGLPQILMRGVCPG*AAAAGC
Trigger: ACACCCAGCGGCTGCTGCGCATCCAGGACATACACC...GCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGCCAGGAGGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp CACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCGGCTCTGGGTCTGGCTaGCTCTCGGAGGTGTCACCC +
Preference number: 4 (lower is better)
Translates to: HSCSLCPCSYRLMSLGTFGSGSG*LSEVSP
Trigger: GGGTGACACCTCCGAGAGGCAGCCAGACCCAGAGCC...GAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp GCAGGCCTCCTGGCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCACTTGGGTACCCAGTaGCCGCCATCACAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: AGLLASHLSRGLPQILMRHLGTQ*PPSQLS
Trigger: GCTGAGCTGTGATGGCGGGCACTGGGTACCCAAGTG...GCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGCCAGGAGGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp CTGCCGATGAGTACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAAACACGCACTCACAGCTaGAGTTTGTGCCCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: LPMSTGLEPTKQLGRGGETRTHS*SLCPCS
Trigger: GGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGT...TTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTACTCATCGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCCCCGCCACTGTCGGCTaGGGGTTTGTAGTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: PTDSCPWEPSLGYPVPAIPATVG*GFVVPD
Trigger: GTCTGGAACTACAAACCCCCAGCCGACAGTGGCGGG...GATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp TACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAACGAGTGGGAAGGACATGTCAGCCATGTaGGGCAGCAGGGAGAAGATC +
Preference number: 4 (lower is better)
Translates to: YRPGAHKAARKRRGTSGKDMSAM*GSREKI
Trigger: GATCTTCTCCCTGCTGCCCCACATGGCTGACATGTC...CTTCCCACTCGTTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCAAGGGGTGTATGTCCTaGATGCGCAGCAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: PTDSCPWEPSLGYPVPAIKGCMS*MRSSRW
Trigger: CCAGCGGCTGCTGCGCATCCAGGACATACACCCCTT...GATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp TCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGCGGCTCAGAGGGCTCTaGGTCTGGCTGCCTCTCGGA +
Preference number: 4 (lower is better)
Translates to: SHTRTHSCSLCPCSYRLMRLRGL*VWLPLG
Trigger: TCCGAGAGGCAGCCAGACCCAGAGCCCTCTGAGCCG...CATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCAGTGTCCATCTGTCTTaGCCCGGGAGTGGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: PTDSCPWEPSLGYPVPAISVHLS*PGSGGS
Trigger: TGAGCCGCCACTCCCGGGCCAAGACAGATGGACACT...GATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp CTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCACAGCTCAGCATCCACAGGAACAAGAACCTATaGGCAGGCTGGGGCCGATTG +
Preference number: 4 (lower is better)
Translates to: LGNLHLGTQCPPSQLSIHRNKNL*AGWGRL
Trigger: CAATCGGCCCCAGCCTGCTCATAGGTTCTTGTTCCT...GTGGATGCTGAGCTGTGATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp TACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAACGAGTGGGAAGCACTTTAGTGGGATCTaGGGGATTTCTCCCCAGACC +
Preference number: 4 (lower is better)
Translates to: YRPGAHKAARKRRGTSGKHFSGI*GISPQT
Trigger: GGTCTGGGGAGAAATCCCTCAGATCCCACTAAAGTG...CTTCCCACTCGTTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp GCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCTGCCGATGAGTTCATGCGCCTGCCGATaGGTACAGGCCTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: ASHLSRGLPQILMRLPMSSCACR*VQAWSP
Trigger: TGGGCTCCAGGCCTGTACTCATCGGCAGGCGCATGA...ACTCATCGGCAGGCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp TACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAACGAGTGGGAAGATGATGTGGCCGGAATaGGGTCATGCCAAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: YRPGAHKAARKRRGTSGKMMWPE*GHAKLL
Trigger: CAGAAGCTTGGCATGACCTCATTCCGGCCACATCAT...CTTCCCACTCGTTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp CTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCACAGCTCAGCATCCACCCAGTGGAAGTAGCCTaGACAGTGTGCTCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: LGNLHLGTQCPPSQLSIHPVEVA*TVCSGV
Trigger: TACCCCAGAGCACACTGTTCAGGCTACTTCCACTGG...GTGGATGCTGAGCTGTGATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR GCA 90 bp CTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCACAGCTCAGCATCCACGGCTCCAGTAGAAGTTaGTGGAAGCCACCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: LGNLHLGTQCPPSQLSIHGSSRS*WKPPAV
Trigger: CACTGCAGGTGGCTTCCAGCAACTTCTACTGGAGCC...GTGGATGCTGAGCTGTGATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp CTGCCGATGAGTACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAAAAGAGGGAGATGGCCTaGATCAGCACATACTCCTCC +
Preference number: 4 (lower is better)
Translates to: LPMSTGLEPTKQLGRGGEKREMA*ISTYSS
Trigger: GGAGGAGTATGTGCTGATGCAGGCCATCTCCCTCTT...TTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTACTCATCGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp GGAAAGGGCAACCTTGCCTCTCTGATGGTCCTGACCTACAGGTCAGTGCACTCTCACTTGGGTACCCAGTaGCCGCCATCACAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GKGNLASLMVLTYRSVHSHLGTQ*PPSQLS
Trigger: GCTGAGCTGTGATGGCGGGCACTGGGTACCCAAGTG...AGAGTGCACTGACCTGTAGGTCAGGACCATCAGAGAGGCAAGGTTGCCCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp TACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAACGAGTGGGAAGTCTGGGCCTCTTGGATaGTTTGAAGCCAACTCAGCC +
Preference number: 4 (lower is better)
Translates to: YRPGAHKAARKRRGTSGKSGPLG*FEANSA
Trigger: GGCTGAGTTGGCTTCAAACCATCCAAGAGGCCCAGA...CTTCCCACTCGTTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337940.4
CDS-3UTR CCA 90 bp GCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCACTGTCGGCTaGGGGTTTGTAGTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: ALAPTDSCPWEPSLGYPVPATVG*GFVVPD
Trigger: GTCTGGAACTACAAACCCCCAGCCGACAGTGGCGGG...CACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCACAGCTCAGCATCCACGACATGTCAGCCATGTaGGGCAGCAGGGAGAAGATC +
Preference number: 4 (lower is better)
Translates to: LGNLHLGTQCPPSQLSIHDMSAM*GSREKI
Trigger: GATCTTCTCCCTGCTGCCCCACATGGCTGACATGTC...GTGGATGCTGAGCTGTGATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp GTATGTGGGCATAGACCCCAGATGGCCCATCCTTGGTCGCTTGGTCCCTTCCACGACATGTCAGCCATGTaGGGCAGCAGGGAGAAGATC +
Preference number: 4 (lower is better)
Translates to: VCGHRPQMAHPWSLGPFHDMSAM*GSREKI
Trigger: GATCTTCTCCCTGCTGCCCCACATGGCTGACATGTC...GTGGAAGGGACCAAGCGACCAAGGATGGGCCATCTGGGGTCTATGCCCACATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp GTATGTGGGCATAGACCCCAGATGGCCCATCCTTGGTCGCTTGGTCCCTTCCACTTCAGCAGGGAGATCTaGTCCTCGATGGGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: VCGHRPQMAHPWSLGPFHFSREI*SSMGKS
Trigger: GGACTTGCCCATCGAGGACCAGATCTCCCTGCTGAA...GTGGAAGGGACCAAGCGACCAAGGATGGGCCATCTGGGGTCTATGCCCACATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp TCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGCACACCTGGGCGGTCTaGGGAGAAGAGGGAGATGGC +
Preference number: 4 (lower is better)
Translates to: SHTRTHSCSLCPCSYRLMHTWAV*GEEGDG
Trigger: GCCATCTCCCTCTTCTCCCCAGACCGCCCAGGTGTG...CATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp GGAAAGGGCAACCTTGCCTCTCTGATGGTCCTGACCTACAGGTCAGTGCACTCTAGTGTCCATCTGTCTTaGCCCGGGAGTGGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: GKGNLASLMVLTYRSVHSSVHLS*PGSGGS
Trigger: TGAGCCGCCACTCCCGGGCCAAGACAGATGGACACT...AGAGTGCACTGACCTGTAGGTCAGGACCATCAGAGAGGCAAGGTTGCCCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CTGCCGATGAGTACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAAGGCATTGTCGGCTCTTaGCAGTGTCCATCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: LPMSTGLEPTKQLGRGGEGIVGS*QCPSVL
Trigger: CAAGACAGATGGACACTGCCAAGAGCCGACAATGCC...TTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTACTCATCGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp GTATGTGGGCATAGACCCCAGATGGCCCATCCTTGGTCGCTTGGTCCCTTCCACCCATCCTTGGTCGCTTaGTCCCTTCCACACCTTGAC +
Preference number: 4 (lower is better)
Translates to: VCGHRPQMAHPWSLGPFHPSLVA*SLPHLD
Trigger: GTCAAGGTGTGGAAGGGACCAAGCGACCAAGGATGG...GTGGAAGGGACCAAGCGACCAAGGATGGGCCATCTGGGGTCTATGCCCACATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CTGCCGATGAGTACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAAGGAAGCGAACAAACGTaGGTATGTGGGCATAGACCC +
Preference number: 4 (lower is better)
Translates to: LPMSTGLEPTKQLGRGGEGSEQT*VCGHRP
Trigger: GGGTCTATGCCCACATACCCACGTTTGTTCGCTTCC...TTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTACTCATCGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CTGCCGATGAGTACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAACCAGGCCCCATCAAGTaGCAAACAGACCTACCTACA +
Preference number: 4 (lower is better)
Translates to: LPMSTGLEPTKQLGRGGEPGPIK*QTDLPT
Trigger: TGTAGGTAGGTCTGTTTGCCACTTGATGGGGCCTGG...TTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTACTCATCGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp GTATGTGGGCATAGACCCCAGATGGCCCATCCTTGGTCGCTTGGTCCCTTCCACCTCCAGGTTTGCTTCTaGGCCTCTTGGACTGCTTGG +
Preference number: 4 (lower is better)
Translates to: VCGHRPQMAHPWSLGPFHLQVCF*ASWTAW
Trigger: CCAAGCAGTCCAAGAGGCCCAGAAGCAAACCTGGAG...GTGGAAGGGACCAAGCGACCAAGGATGGGCCATCTGGGGTCTATGCCCACATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp GCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCGTCCATCAGCTCCCTaGTCATCATCCGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: ALAPTDSCPWEPSLGYPVRPSAP*SSSAAP
Trigger: AGGAGCAGCGGATGATGATCAGGGAGCTGATGGACG...CACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp GGAAAGGGCAACCTTGCCTCTCTGATGGTCCTGACCTACAGGTCAGTGCACTCTCCGCTCAGCTACCTGTaGTGCCGAACAACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GKGNLASLMVLTYRSVHSPLSYL*CRTTPA
Trigger: TGCAGGAGTTGTTCGGCATCACAGGTAGCTGAGCGG...AGAGTGCACTGACCTGTAGGTCAGGACCATCAGAGAGGCAAGGTTGCCCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp GCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCTGCCGATGAGTCAGGGGTATGGCAGGTaGTCTGAGGGACCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: ASHLSRGLPQILMRLPMSQGYGR*SEGPLL
Trigger: AAGGAGGGGTCCCTCAGAGCACCTGCCATACCCCTG...ACTCATCGGCAGGCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337940.4
CDS-3UTR GCA 90 bp CACCAAATCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGTCAGCCGCAGCACTGTaGAGGGGTATGGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: HQITHTHSQLQFVPLLLQSAAAL*RGMAGA
Trigger: AGCACCTGCCATACCCCTGCACAGTGCTGCGGCTGA...CTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGATTTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337940.4
CDS-3UTR GCA 90 bp CACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACTCCCTCGATGGGGCCTaGAGAGACTCTGGCAACTCG +
Preference number: 4 (lower is better)
Translates to: HSQLQFVPLLLQTHVLGNSLDGA*RDSGNS
Trigger: CGAGTTGCCAGAGTCTCTGCAGGCCCCATCGAGGGA...GTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337940.4
ENST00000393716.8
CDS-3UTR GCA 90 bp CTGCCGATGAGTACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAATTGCTGGAAGCCACCTaGAGTGTCTTCCAAGCAGTA +
Preference number: 4 (lower is better)
Translates to: LPMSTGLEPTKQLGRGGELLEAT*SVFQAV
Trigger: TACTGCTTGGAAGACACTGCAGGTGGCTTCCAGCAA...TTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTACTCATCGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp GTATGTGGGCATAGACCCCAGATGGCCCATCCTTGGTCGCTTGGTCCCTTCCACATGCCGAACAACTCCTaGATGAGGGGCGTAGCAAAG +
Preference number: 4 (lower is better)
Translates to: VCGHRPQMAHPWSLGPFHMPNNS*MRGVAK
Trigger: CTTTGCTACGCCCCTCATGCAGGAGTTGTTCGGCAT...GTGGAAGGGACCAAGCGACCAAGGATGGGCCATCTGGGGTCTATGCCCACATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp GTATGTGGGCATAGACCCCAGATGGCCCATCCTTGGTCGCTTGGTCCCTTCCACCACAGCTGCAGTTTGTaGCCTTGCTCCTACAGACTC +
Preference number: 4 (lower is better)
Translates to: VCGHRPQMAHPWSLGPFHHSCSL*PCSYRL
Trigger: GAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTG...GTGGAAGGGACCAAGCGACCAAGGATGGGCCATCTGGGGTCTATGCCCACATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp GTATGTGGGCATAGACCCCAGATGGCCCATCCTTGGTCGCTTGGTCCCTTCCACTGTGAACACTTGGCTTaGAGGCTGAGGCCGAGATTC +
Preference number: 4 (lower is better)
Translates to: VCGHRPQMAHPWSLGPFHCEHLA*RLRPRF
Trigger: GAATCTCGGCCTCAGCCTGCAAGCCAAGTGTTCACA...GTGGAAGGGACCAAGCGACCAAGGATGGGCCATCTGGGGTCTATGCCCACATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp CTGCCGATGAGTACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAACTGGGCCTCTTGGACTaGTTGGTGGTAAGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: LPMSTGLEPTKQLGRGGELGLLD*LVVSSL
Trigger: CAAAGAACTTACCACCAAGCAGTCCAAGAGGCCCAG...TTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTACTCATCGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp CACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCCTGCTGGGGACTTACTaGCAGCAGTGGGGACTGGGA +
Preference number: 4 (lower is better)
Translates to: HSCSLCPCSYRLMSLGTFLLGTY*QQWGLG
Trigger: TCCCAGTCCCCACTGCTGGCAGTAAGTCCCCAGCAG...GAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR CCA 90 bp CACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCGGCCTGCAGAGACTCTaGCAACTCGCAGCCACTGCT +
Preference number: 4 (lower is better)
Translates to: HSCSLCPCSYRLMSLGTFGLQRL*QLAATA
Trigger: AGCAGTGGCTGCGAGTTGCCAGAGTCTCTGCAGGCC...GAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337940.4
ENST00000393716.8
CDS-3UTR CCA 90 bp CACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCCCCGCCACTGTCGGCTaGGGGTTTGTAGTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: HSCSLCPCSYRLMSLGTFPATVG*GFVVPD
Trigger: GTCTGGAACTACAAACCCCCAGCCGACAGTGGCGGG...GAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCAAGGGGTGTATGTCCTaGATGCGCAGCAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: HSCSLCPCSYRLMSLGTFKGCMS*MRSSRW
Trigger: CCAGCGGCTGCTGCGCATCCAGGACATACACCCCTT...GAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp AGCAATGAAAAGACTCAGGAAGCGAACAAACGTGGGTATGTGGGCATAGACCCCCGGCTCAGAGGGCTCTaGGTCTGGCTGCCTCTCGGA +
Preference number: 4 (lower is better)
Translates to: SNEKTQEANKRGYVGIDPRLRGL*VWLPLG
Trigger: TCCGAGAGGCAGCCAGACCCAGAGCCCTCTGAGCCG...GGGGTCTATGCCCACATACCCACGTTTGTTCGCTTCCTGAGTCTTTTCATTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CACCAAATCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGAGTGTCCATCTGTCTTaGCCCGGGAGTGGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: HQITHTHSQLQFVPLLLQSVHLS*PGSGGS
Trigger: TGAGCCGCCACTCCCGGGCCAAGACAGATGGACACT...CTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGATTTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CTGCCGATGAGTACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAAGGAACGAGTGGGAAGTaGGAGACAGGACTATTAGAG +
Preference number: 4 (lower is better)
Translates to: LPMSTGLEPTKQLGRGGEGTSGK*ETGLLE
Trigger: CTCTAATAGTCCTGTCTCCCACTTCCCACTCGTTCC...TTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTACTCATCGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCACAGCTCAGCATCCACCCAGGCCCCATCAAGTaGCAAACAGACCTACCTACA +
Preference number: 4 (lower is better)
Translates to: LGNLHLGTQCPPSQLSIHPGPIK*QTDLPT
Trigger: TGTAGGTAGGTCTGTTTGCCACTTGATGGGGCCTGG...GTGGATGCTGAGCTGTGATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp GCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCTGCCGATGAGTACTTACTGCCAGCAGTaGGGACTGGGACCCACAGCC +
Preference number: 4 (lower is better)
Translates to: ASHLSRGLPQILMRLPMSTYCQQ*GLGPTA
Trigger: GGCTGTGGGTCCCAGTCCCCACTGCTGGCAGTAAGT...ACTCATCGGCAGGCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR TCA 90 bp GCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCTGCCGATGAGTGCCTCTTGGATGGTTTaGAGCCAACTCAGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: ASHLSRGLPQILMRLPMSASWMV*SQLSRS
Trigger: GCTGCGGCTGAGTTGGCTTCAAACCATCCAAGAGGC...ACTCATCGGCAGGCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337940.4
CDS-3UTR TCA 90 bp GCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCGGCCTCGTCGGACATaGTCATCTCCTTCTTCATGC +
Preference number: 4 (lower is better)
Translates to: ALAPTDSCPWEPSLGYPVRPRRT*SSPSSC
Trigger: GCATGAAGAAGGAGATGATCATGTCCGACGAGGCCG...CACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp CACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCCGTCCATCAGCTCCCTaGTCATCATCCGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: HSCSLCPCSYRLMSLGTFRPSAP*SSSAAP
Trigger: AGGAGCAGCGGATGATGATCAGGGAGCTGATGGACG...GAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp GTATGTGGGCATAGACCCCAGATGGCCCATCCTTGGTCGCTTGGTCCCTTCCACTCAAAGGTTTTCATCTaGGCGTCCATCAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: VCGHRPQMAHPWSLGPFHSKVFI*ASISSL
Trigger: CAGGGAGCTGATGGACGCTCAGATGAAAACCTTTGA...GTGGAAGGGACCAAGCGACCAAGGATGGGCCATCTGGGGTCTATGCCCACATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp CCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCGTGTTGAATCTCAGTTaGCACAGCTCGAAAGCGGCC +
Preference number: 4 (lower is better)
Translates to: PTDSCPWEPSLGYPVPAIVLNLS*HSSKAA
Trigger: GGCCGCTTTCGAGCTGTGTCAACTGAGATTCAACAC...GATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp GGAAAGGGCAACCTTGCCTCTCTGATGGTCCTGACCTACAGGTCAGTGCACTCTAGGAACAAGAACCTATaGGCAGGCTGGGGCCGATTG +
Preference number: 4 (lower is better)
Translates to: GKGNLASLMVLTYRSVHSRNKNL*AGWGRL
Trigger: CAATCGGCCCCAGCCTGCTCATAGGTTCTTGTTCCT...AGAGTGCACTGACCTGTAGGTCAGGACCATCAGAGAGGCAAGGTTGCCCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp TCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGCCGCTCAGCTACCTGTaGTGCCGAACAACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SHTRTHSCSLCPCSYRLMPLSYL*CRTTPA
Trigger: TGCAGGAGTTGTTCGGCATCACAGGTAGCTGAGCGG...CATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp GCAGGCCTCCTGGCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCATGATGTGGCCGGAATaGGGTCATGCCAAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: AGLLASHLSRGLPQILMRMMWPE*GHAKLL
Trigger: CAGAAGCTTGGCATGACCTCATTCCGGCCACATCAT...GCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGCCAGGAGGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp AGCAATGAAAAGACTCAGGAAGCGAACAAACGTGGGTATGTGGGCATAGACCCCGGAGGATGGACCAGCTaGGGGCTCTTTCCTCTCCCG +
Preference number: 4 (lower is better)
Translates to: SNEKTQEANKRGYVGIDPGGWTS*GLFPLP
Trigger: CGGGAGAGGAAAGAGCCCTCAGCTGGTCCATCCTCC...GGGGTCTATGCCCACATACCCACGTTTGTTCGCTTCCTGAGTCTTTTCATTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR GCA 90 bp CCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCTCCGACTTCCTCATCTaGGTTGACACTGGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: PTDSCPWEPSLGYPVPAISDFLI*VDTGLS
Trigger: GGAAAGCCCAGTGTCAACGCAGATGAGGAAGTCGGA...GATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp CACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCCTGATCATCATCCGCTaGTCCTCTGTCAGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: HSCSLCPCSYRLMSLGTFLIIIR*SSVSPC
Trigger: GCAGGGGCTGACAGAGGAGCAGCGGATGATGATCAG...GAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp GTATGTGGGCATAGACCCCAGATGGCCCATCCTTGGTCGCTTGGTCCCTTCCACCAGGCTGGGGCCGATTaGATTCAATGTAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: VCGHRPQMAHPWSLGPFHQAGAD*IQCRTS
Trigger: TGAAGTCCTACATTGAATGCAATCGGCCCCAGCCTG...GTGGAAGGGACCAAGCGACCAAGGATGGGCCATCTGGGGTCTATGCCCACATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp CCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCATGCCGAACAACTCCTaGATGAGGGGCGTAGCAAAG +
Preference number: 4 (lower is better)
Translates to: PTDSCPWEPSLGYPVPAIMPNNS*MRGVAK
Trigger: CTTTGCTACGCCCCTCATGCAGGAGTTGTTCGGCAT...GATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp GTATGTGGGCATAGACCCCAGATGGCCCATCCTTGGTCGCTTGGTCCCTTCCACTGCAGTTTGTGCCCTTaGTCCTACAGACTCATGTCC +
Preference number: 4 (lower is better)
Translates to: VCGHRPQMAHPWSLGPFHCSLCP*SYRLMS
Trigger: GGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCA...GTGGAAGGGACCAAGCGACCAAGGATGGGCCATCTGGGGTCTATGCCCACATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp GCAGGCCTCCTGGCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCACAGCTGCAGTTTGTaGCCTTGCTCCTACAGACTC +
Preference number: 4 (lower is better)
Translates to: AGLLASHLSRGLPQILMRHSCSL*PCSYRL
Trigger: GAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTG...GCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGCCAGGAGGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp GCAGGCCTCCTGGCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCATACACGGCAGATTTaGGGACCTCCGACTTCCTCA +
Preference number: 4 (lower is better)
Translates to: AGLLASHLSRGLPQILMRHTRQI*GPPTSS
Trigger: TGAGGAAGTCGGAGGTCCCCAAATCTGCCGTGTATG...GCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGCCAGGAGGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CACCAAATCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGGGACCTGGCTCCACTTaGCAGCTTCTTCCCTCGATG +
Preference number: 4 (lower is better)
Translates to: HQITHTHSQLQFVPLLLQGPGST*QLLPSM
Trigger: CATCGAGGGAAGAAGCTGCCAAGTGGAGCCAGGTCC...CTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGATTTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337940.4
ENST00000393716.8
CDS-3UTR CCA 90 bp CACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACGGACCTGGCTCCACTTaGCAGCTTCTTCCCTCGATG +
Preference number: 4 (lower is better)
Translates to: HSQLQFVPLLLQTHVLGNGPGST*QLLPSM
Trigger: CATCGAGGGAAGAAGCTGCCAAGTGGAGCCAGGTCC...GTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337940.4
ENST00000393716.8
CDS-3UTR CCA 90 bp GCAGGCCTCCTGGCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCGGGAGAAGAGGGAGATaGCCTGCATCAGCACATACT +
Preference number: 4 (lower is better)
Translates to: AGLLASHLSRGLPQILMRGRRGR*PASAHT
Trigger: AGTATGTGCTGATGCAGGCCATCTCCCTCTTCTCCC...GCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGCCAGGAGGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCGGCATTGTCGGCTCTTaGCAGTGTCCATCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: PTDSCPWEPSLGYPVPAIGIVGS*QCPSVL
Trigger: CAAGACAGATGGACACTGCCAAGAGCCGACAATGCC...GATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCACAGCTCAGCATCCACCCACGTAAGAGTCTGTaGCTTCACTCCCTACAGACT +
Preference number: 4 (lower is better)
Translates to: LGNLHLGTQCPPSQLSIHPRKSL*LHSLQT
Trigger: AGTCTGTAGGGAGTGAAGCCACAGACTCTTACGTGG...GTGGATGCTGAGCTGTGATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp TCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGCAGATGGCCCATCCTTaGTCGCTTGGTCCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: SHTRTHSCSLCPCSYRLMQMAHP*SLGPFH
Trigger: GTGGAAGGGACCAAGCGACCAAGGATGGGCCATCTG...CATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCCAGATGGCCCATCCTTaGTCGCTTGGTCCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: HSCSLCPCSYRLMSLGTFQMAHP*SLGPFH
Trigger: GTGGAAGGGACCAAGCGACCAAGGATGGGCCATCTG...GAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCGGCATAGACCCCAGATaGCCCATCCTTGGTCGCTTG +
Preference number: 4 (lower is better)
Translates to: HSCSLCPCSYRLMSLGTFGIDPR*PILGRL
Trigger: CAAGCGACCAAGGATGGGCCATCTGGGGTCTATGCC...GAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CACCAAATCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGGAGGAGGGGAACGAGTaGGAAGTGGGAGACAGGACT +
Preference number: 4 (lower is better)
Translates to: HQITHTHSQLQFVPLLLQEEGNE*EVGDRT
Trigger: AGTCCTGTCTCCCACTTCCCACTCGTTCCCCTCCTC...CTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGATTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CAGTGCACTCTCCACGTAAGAGTCTGTGGCTTCACTCCCTACAGACTGAACTGGGAGGAGGGGAACGAGTaGGAAGTGGGAGACAGGACT +
Preference number: 4 (lower is better)
Translates to: QCTLHVRVCGFTPYRLNWEEGNE*EVGDRT
Trigger: AGTCCTGTCTCCCACTTCCCACTCGTTCCCCTCCTC...CCAGTTCAGTCTGTAGGGAGTGAAGCCACAGACTCTTACGTGGAGAGTGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCACAGCTCAGCATCCACCAGATCAGAAGGCCATaGCTAAAGCCAAAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: LGNLHLGTQCPPSQLSIHQIRRP*LKPKRV
Trigger: CACCCTCTTTGGCTTTAGCCATGGCCTTCTGATCTG...GTGGATGCTGAGCTGTGATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466380.6
3UTR CAA 72 bp TTGCTCCTACAGACTCATGTCCTTGGGAACCTTCACTaGGGTACCCAGTGCCCGCCATCACAGCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: LLLQTHVLGNLH*GTQCPPSQLSI
Trigger: GATGCTGAGCTGTGATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
3UTR CAA 72 bp TGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTaGGGAACCTTCACTTGGGTACCCAGTGCCCGCCAT +
Preference number: 4 (lower is better)
Translates to: CSLCPCSYRLMS*GTFTWVPSARH
Trigger: ATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp CACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCCCCTCCTTGAAGTGGTaGGTCCTGGTGACTGTCATG +
Preference number: 4 (lower is better)
Translates to: HSCSLCPCSYRLMSLGTFPSLKW*VLVTVM
Trigger: CATGACAGTCACCAGGACTCACCACTTCAAGGAGGG...GAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337940.4
CDS-3UTR TCA 90 bp TACTCACAAGTGGCTATAAACAAGGCAGGCACTTTCATACCCTTTAGCTTTGAGGCCGGGTCTTCCGGGTaGTCTCGCAGGCGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: YSQVAINKAGTFIPFSFEAGSSG*SRRRPS
Trigger: GGAAGGGCGCCTGCGAGATCACCCGGAAGACCCGGC...CTCAAAGCTAAAGGGTATGAAAGTGCCTGCCTTGTTTATAGCCACTTGTGAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp CACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCCGGCCTCGTCGGACATaGTCATCTCCTTCTTCATGC +
Preference number: 4 (lower is better)
Translates to: HSCSLCPCSYRLMSLGTFRPRRT*SSPSSC
Trigger: GCATGAAGAAGGAGATGATCATGTCCGACGAGGCCG...GAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp GCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGGTGTTGAATCTCAGTTaGCACAGCTCGAAAGCGGCC +
Preference number: 4 (lower is better)
Translates to: ALAPTDSCPWEPSLGYPVVLNLS*HSSKAA
Trigger: GGCCGCTTTCGAGCTGTGTCAACTGAGATTCAACAC...CACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp GCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCTGCCGATGAGTAGGAACAAGAACCTATaGGCAGGCTGGGGCCGATTG +
Preference number: 4 (lower is better)
Translates to: ASHLSRGLPQILMRLPMSRNKNL*AGWGRL
Trigger: CAATCGGCCCCAGCCTGCTCATAGGTTCTTGTTCCT...ACTCATCGGCAGGCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp CAGTGCACTCTCCACGTAAGAGTCTGTGGCTTCACTCCCTACAGACTGAACTGGGTCATGCCAAGCTTCTaGCATTTGGTGCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QCTLHVRVCGFTPYRLNWVMPSF*HLVQAS
Trigger: GGAGGCCTGCACCAAATGTCAGAAGCTTGGCATGAC...CCAGTTCAGTCTGTAGGGAGTGAAGCCACAGACTCTTACGTGGAGAGTGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp GCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGTGCAGAGACACAGAATaGTGTGGCCGGAATGAGGTC +
Preference number: 4 (lower is better)
Translates to: ALAPTDSCPWEPSLGYPVCRDTE*CGRNEV
Trigger: GACCTCATTCCGGCCACATCATTCTGTGTCTCTGCA...CACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp GTATGTGGGCATAGACCCCAGATGGCCCATCCTTGGTCGCTTGGTCCCTTCCACTTGCTTTTCTCACTGTaGACACTTGGCTTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: VCGHRPQMAHPWSLGPFHLLFSL*TLGLQA
Trigger: AGCCTGCAAGCCAAGTGTTCACAGTGAGAAAAGCAA...GTGGAAGGGACCAAGCGACCAAGGATGGGCCATCTGGGGTCTATGCCCACATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp CACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCCCTGGGGTCCACTTTaGACAATCCGGTGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: HSQLQFVPLLLQTHVLGNPWGPL*TIRCKG
Trigger: TCCTTTGCACCGGATTGTTCAAAGTGGACCCCAGGG...GTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp CAGTGCACTCTCCACGTAAGAGTCTGTGGCTTCACTCCCTACAGACTGAACTGGCCCTGGGGTCCACTTTaGACAATCCGGTGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: QCTLHVRVCGFTPYRLNWPWGPL*TIRCKG
Trigger: TCCTTTGCACCGGATTGTTCAAAGTGGACCCCAGGG...CCAGTTCAGTCTGTAGGGAGTGAAGCCACAGACTCTTACGTGGAGAGTGCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp CACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCGCACTTCCCAAGGGATaGGAAAGACTTGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: HSCSLCPCSYRLMSLGTFALPKG*ERLEAG
Trigger: CCCAGCCTCAAGTCTTTCTCATCCCTTGGGAAGTGC...GAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR GCA 90 bp GCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGTCCGACTTCCTCATCTaGGTTGACACTGGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: ALAPTDSCPWEPSLGYPVSDFLI*VDTGLS
Trigger: GGAAAGCCCAGTGTCAACGCAGATGAGGAAGTCGGA...CACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp GGAAAGGGCAACCTTGCCTCTCTGATGGTCCTGACCTACAGGTCAGTGCACTCTTCATCTCCTTCTTCATaGCGCTCTCCAGGCACTTGC +
Preference number: 4 (lower is better)
Translates to: GKGNLASLMVLTYRSVHSSSPSS*RSPGTC
Trigger: GCAAGTGCCTGGAGAGCGGCATGAAGAAGGAGATGA...AGAGTGCACTGACCTGTAGGTCAGGACCATCAGAGAGGCAAGGTTGCCCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp CACCAAATCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGGGCTCCAGTAGAAGTTaGTGGAAGCCACCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: HQITHTHSQLQFVPLLLQGSSRS*WKPPAV
Trigger: CACTGCAGGTGGCTTCCAGCAACTTCTACTGGAGCC...CTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGATTTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp AGCAATGAAAAGACTCAGGAAGCGAACAAACGTGGGTATGTGGGCATAGACCCCATGGCGAATTGCTCCTaGAGCTGGTCCACCACGCGG +
Preference number: 4 (lower is better)
Translates to: SNEKTQEANKRGYVGIDPMANCS*SWSTTR
Trigger: CCGCGTGGTGGACCAGCTGCAGGAGCAATTCGCCAT...GGGGTCTATGCCCACATACCCACGTTTGTTCGCTTCCTGAGTCTTTTCATTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp CCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCCAGGCTGGGGCCGATTaGATTCAATGTAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: PTDSCPWEPSLGYPVPAIQAGAD*IQCRTS
Trigger: TGAAGTCCTACATTGAATGCAATCGGCCCCAGCCTG...GATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp GCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGAGGAAAGGGCAACCTTaGCTCTCTGATGGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: ALAPTDSCPWEPSLGYPVRKGQP*LSDGPD
Trigger: GTCAGGACCATCAGAGAGGCAAGGTTGCCCTTTCCT...CACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp CTGCCGATGAGTACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAACTATATCTGAGTCAATaGTGTATACCCCACAGCAGG +
Preference number: 4 (lower is better)
Translates to: LPMSTGLEPTKQLGRGGELYLSQ*CIPHSR
Trigger: CCTGCTGTGGGGTATACAGCATTGACTCAGATATAG...TTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTACTCATCGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp CACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACACACGCACTCACAGCTaGAGTTTGTGCCCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: HSQLQFVPLLLQTHVLGNTRTHS*SLCPCS
Trigger: GGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGT...GTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp GGAAAGGGCAACCTTGCCTCTCTGATGGTCCTGACCTACAGGTCAGTGCACTCTTGTGAACACTTGGCTTaGAGGCTGAGGCCGAGATTC +
Preference number: 4 (lower is better)
Translates to: GKGNLASLMVLTYRSVHSCEHLA*RLRPRF
Trigger: GAATCTCGGCCTCAGCCTGCAAGCCAAGTGTTCACA...AGAGTGCACTGACCTGTAGGTCAGGACCATCAGAGAGGCAAGGTTGCCCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp TCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGGCTATATCTGGGGCCTaGAGGTCCCCTGAGAAACAC +
Preference number: 4 (lower is better)
Translates to: SHTRTHSCSLCPCSYRLMAISGA*RSPEKH
Trigger: GTGTTTCTCAGGGGACCTGCAGGCCCCAGATATAGC...CATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR GCA 90 bp TCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGGCTTACACAGCTCACTaGTGGGGACTTACTGCCAGC +
Preference number: 4 (lower is better)
Translates to: SHTRTHSCSLCPCSYRLMAYTAH*WGLTAS
Trigger: GCTGGCAGTAAGTCCCCAGCAGTGAGCTGTGTAAGC...CATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR GCA 90 bp GCAGGCCTCCTGGCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCGCGCAGAATGTAAGGTaGTTACACAGCTCACTGCTG +
Preference number: 4 (lower is better)
Translates to: AGLLASHLSRGLPQILMRAQNVR*LHSSLL
Trigger: CAGCAGTGAGCTGTGTAAGCACCTTACATTCTGCGC...GCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGCCAGGAGGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR CCA 90 bp GCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCATACACGGCAGATTTaGGGACCTCCGACTTCCTCA +
Preference number: 4 (lower is better)
Translates to: ALAPTDSCPWEPSLGYPVHTRQI*GPPTSS
Trigger: TGAGGAAGTCGGAGGTCCCCAAATCTGCCGTGTATG...CACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCACTGCTAAGCACCCCTaGCAGCCGGAAATTCTTGAA +
Preference number: 4 (lower is better)
Translates to: PTDSCPWEPSLGYPVPAITAKHP*QPEILE
Trigger: TTCAAGAATTTCCGGCTGCCAGGGGTGCTTAGCAGT...GATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337940.4
ENST00000393716.8
CDS-3UTR CCA 90 bp TCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTTCAGCAGGGAGATCTaGTCCTCGATGGGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: SHTRTHSCSLCPCSYRLMFSREI*SSMGKS
Trigger: GGACTTGCCCATCGAGGACCAGATCTCCCTGCTGAA...CATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp AGCAATGAAAAGACTCAGGAAGCGAACAAACGTGGGTATGTGGGCATAGACCCCAATTGCTCCTGCAGCTaGTCCACCACGCGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SNEKTQEANKRGYVGIDPNCSCS*STTRCC
Trigger: GCAGCACCGCGTGGTGGACCAGCTGCAGGAGCAATT...GGGGTCTATGCCCACATACCCACGTTTGTTCGCTTCCTGAGTCTTTTCATTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp GCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGGGAAGCGAACAAACGTaGGTATGTGGGCATAGACCC +
Preference number: 4 (lower is better)
Translates to: ALAPTDSCPWEPSLGYPVGSEQT*VCGHRP
Trigger: GGGTCTATGCCCACATACCCACGTTTGTTCGCTTCC...CACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp GTATGTGGGCATAGACCCCAGATGGCCCATCCTTGGTCGCTTGGTCCCTTCCACACAGACTCATGTCCTTaGGAACCTTCACTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: VCGHRPQMAHPWSLGPFHTDSCP*EPSLGY
Trigger: GTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGT...GTGGAAGGGACCAAGCGACCAAGGATGGGCCATCTGGGGTCTATGCCCACATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp GCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCTGCCGATGAGTCTGAACAGTGTGCTCTaGGGTAGGAGGACAGCATGG +
Preference number: 4 (lower is better)
Translates to: ASHLSRGLPQILMRLPMSLNSVL*GRRTAW
Trigger: CCATGCTGTCCTCCTACCCCAGAGCACACTGTTCAG...ACTCATCGGCAGGCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR CCA 90 bp CACCAAATCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGAGTAAAGCAGGGGCATaGGCCCCAACAAGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: HQITHTHSQLQFVPLLLQSKAGA*APTREG
Trigger: TCCCTCTCTTGTTGGGGCCCATGCCCCTGCTTTACT...CTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGATTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR TCA 90 bp GCAGGCCTCCTGGCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCTTTGAACATGTAGGTTaGCATGTCAGCCATGTGGGG +
Preference number: 4 (lower is better)
Translates to: AGLLASHLSRGLPQILMRFEHVG*HVSHVG
Trigger: CCCCACATGGCTGACATGTCAACCTACATGTTCAAA...GCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGCCAGGAGGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp CACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCGTGTTGAATCTCAGTTaGCACAGCTCGAAAGCGGCC +
Preference number: 4 (lower is better)
Translates to: HSCSLCPCSYRLMSLGTFVLNLS*HSSKAA
Trigger: GGCCGCTTTCGAGCTGTGTCAACTGAGATTCAACAC...GAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp AGCAATGAAAAGACTCAGGAAGCGAACAAACGTGGGTATGTGGGCATAGACCCCCCGCTCAGCTACCTGTaGTGCCGAACAACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SNEKTQEANKRGYVGIDPPLSYL*CRTTPA
Trigger: TGCAGGAGTTGTTCGGCATCACAGGTAGCTGAGCGG...GGGGTCTATGCCCACATACCCACGTTTGTTCGCTTCCTGAGTCTTTTCATTGCT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp TCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGCACTTTAGTGGGATCTaGGGGATTTCTCCCCAGACC +
Preference number: 4 (lower is better)
Translates to: SHTRTHSCSLCPCSYRLMHFSGI*GISPQT
Trigger: GGTCTGGGGAGAAATCCCTCAGATCCCACTAAAGTG...CATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp TCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTGCAGAGACACAGAATaGTGTGGCCGGAATGAGGTC +
Preference number: 4 (lower is better)
Translates to: SHTRTHSCSLCPCSYRLMCRDTE*CGRNEV
Trigger: GACCTCATTCCGGCCACATCATTCTGTGTCTCTGCA...CATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp CCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCGGATTTCCTAGGGGTTaGCATTTCTCAAGTGGATGC +
Preference number: 4 (lower is better)
Translates to: PTDSCPWEPSLGYPVPAIGFPRG*HFSSGC
Trigger: GCATCCACTTGAGAAATGTCAACCCCTAGGAAATCC...GATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR GCA 90 bp GCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCTGCCGATGAGTTCTCACCTCCAGGTTTaGTTCTGGGCCTCTTGGATG +
Preference number: 4 (lower is better)
Translates to: ASHLSRGLPQILMRLPMSSHLQV*FWASWM
Trigger: CATCCAAGAGGCCCAGAAGCAAACCTGGAGGTGAGA...ACTCATCGGCAGGCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337940.4
CDS-3UTR GCA 90 bp CACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACTCATCTCCTTCTTCATaGCGCTCTCCAGGCACTTGC +
Preference number: 4 (lower is better)
Translates to: HSQLQFVPLLLQTHVLGNSSPSS*RSPGTC
Trigger: GCAAGTGCCTGGAGAGCGGCATGAAGAAGGAGATGA...GTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp CAGTGCACTCTCCACGTAAGAGTCTGTGGCTTCACTCCCTACAGACTGAACTGGTCATCTCCTTCTTCATaGCGCTCTCCAGGCACTTGC +
Preference number: 4 (lower is better)
Translates to: QCTLHVRVCGFTPYRLNWSSPSS*RSPGTC
Trigger: GCAAGTGCCTGGAGAGCGGCATGAAGAAGGAGATGA...CCAGTTCAGTCTGTAGGGAGTGAAGCCACAGACTCTTACGTGGAGAGTGCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp CAGTGCACTCTCCACGTAAGAGTCTGTGGCTTCACTCCCTACAGACTGAACTGGAAGAGGGAGATGGCCTaGATCAGCACATACTCCTCC +
Preference number: 4 (lower is better)
Translates to: QCTLHVRVCGFTPYRLNWKREMA*ISTYSS
Trigger: GGAGGAGTATGTGCTGATGCAGGCCATCTCCCTCTT...CCAGTTCAGTCTGTAGGGAGTGAAGCCACAGACTCTTACGTGGAGAGTGCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp CACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCAGAGTAATGGCGAATTaGTCCTGCAGCTGGTCCACC +
Preference number: 4 (lower is better)
Translates to: HSCSLCPCSYRLMSLGTFRVMAN*SCSWST
Trigger: GGTGGACCAGCTGCAGGAGCAATTCGCCATTACTCT...GAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp CACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACAGAGTAATGGCGAATTaGTCCTGCAGCTGGTCCACC +
Preference number: 4 (lower is better)
Translates to: HSQLQFVPLLLQTHVLGNRVMAN*SCSWST
Trigger: GGTGGACCAGCTGCAGGAGCAATTCGCCATTACTCT...GTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp CACCAAATCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGAGAGTAATGGCGAATTaGTCCTGCAGCTGGTCCACC +
Preference number: 4 (lower is better)
Translates to: HQITHTHSQLQFVPLLLQRVMAN*SCSWST
Trigger: GGTGGACCAGCTGCAGGAGCAATTCGCCATTACTCT...CTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGATTTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp CACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACATGCCGAACAACTCCTaGATGAGGGGCGTAGCAAAG +
Preference number: 4 (lower is better)
Translates to: HSQLQFVPLLLQTHVLGNMPNNS*MRGVAK
Trigger: CTTTGCTACGCCCCTCATGCAGGAGTTGTTCGGCAT...GTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp CACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCACAGCTGCAGTTTGTaGCCTTGCTCCTACAGACTC +
Preference number: 4 (lower is better)
Translates to: HSQLQFVPLLLQTHVLGNHSCSL*PCSYRL
Trigger: GAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTG...GTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp CAGTGCACTCTCCACGTAAGAGTCTGTGGCTTCACTCCCTACAGACTGAACTGGTTACCAAGGAGCCGCTaGCTTGTTCAGGACAGGAGT +
Preference number: 4 (lower is better)
Translates to: QCTLHVRVCGFTPYRLNWLPRSR*LVQDRS
Trigger: ACTCCTGTCCTGAACAAGGCAGCGGCTCCTTGGTAA...CCAGTTCAGTCTGTAGGGAGTGAAGCCACAGACTCTTACGTGGAGAGTGCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp TCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTTACCAAGGAGCCGCTaGCTTGTTCAGGACAGGAGT +
Preference number: 4 (lower is better)
Translates to: SHTRTHSCSLCPCSYRLMLPRSR*LVQDRS
Trigger: ACTCCTGTCCTGAACAAGGCAGCGGCTCCTTGGTAA...CATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp CTGCCGATGAGTACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAACTTCTCTATCCAATTTaGACTTCCCAAGGGATGAGA +
Preference number: 4 (lower is better)
Translates to: LPMSTGLEPTKQLGRGGELLYPI*TSQGMR
Trigger: TCTCATCCCTTGGGAAGTGCAAATTGGATAGAGAAG...TTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTACTCATCGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR CCA 90 bp GATTTGACATTAAACCCAGGGCTACATTTCCCAAAACTAGTTCTTAGGTGTGGACGCAGGCGGCAGGCCTaGCACTGTCGCCGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: DLTLNPGLHFPKLVLRCGRRRQA*HCRRVF
Trigger: GAAGACCCGGCGACAGTGCCAGGCCTGCCGCCTGCG...TCCACACCTAAGAACTAGTTTTGGGAAATGTAGCCCTGGGTTTAATGTCAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp GGAAAGGGCAACCTTGCCTCTCTGATGGTCCTGACCTACAGGTCAGTGCACTCTACTGCTAAGCACCCCTaGCAGCCGGAAATTCTTGAA +
Preference number: 4 (lower is better)
Translates to: GKGNLASLMVLTYRSVHSTAKHP*QPEILE
Trigger: TTCAAGAATTTCCGGCTGCCAGGGGTGCTTAGCAGT...AGAGTGCACTGACCTGTAGGTCAGGACCATCAGAGAGGCAAGGTTGCCCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337940.4
ENST00000393716.8
CDS-3UTR CCA 90 bp AGCAATGAAAAGACTCAGGAAGCGAACAAACGTGGGTATGTGGGCATAGACCCCAGCTTCTTCCCTCGATaGGGCCTGCAGAGACTCTGG +
Preference number: 4 (lower is better)
Translates to: SNEKTQEANKRGYVGIDPSFFPR*GLQRLW
Trigger: CCAGAGTCTCTGCAGGCCCCATCGAGGGAAGAAGCT...GGGGTCTATGCCCACATACCCACGTTTGTTCGCTTCCTGAGTCTTTTCATTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337940.4
ENST00000393716.8
CDS-3UTR CCA 90 bp CACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCAGATCTTTCCGGACCTaGCTCCACTTGGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: HSCSLCPCSYRLMSLGTFRSFRT*LHLAAS
Trigger: AGAAGCTGCCAAGTGGAGCCAGGTCCGGAAAGATCT...GAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337940.4
ENST00000393716.8
CDS-3UTR CCA 90 bp TCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGAGATCTTTCCGGACCTaGCTCCACTTGGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SHTRTHSCSLCPCSYRLMRSFRT*LHLAAS
Trigger: AGAAGCTGCCAAGTGGAGCCAGGTCCGGAAAGATCT...CATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337940.4
ENST00000393716.8
CDS-3UTR CCA 90 bp GGAAAGGGCAACCTTGCCTCTCTGATGGTCCTGACCTACAGGTCAGTGCACTCTTCCAGTAGAAGTTGCTaGAAGCCACCTGCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: GKGNLASLMVLTYRSVHSSSRSC*KPPAVS
Trigger: AGACACTGCAGGTGGCTTCCAGCAACTTCTACTGGA...AGAGTGCACTGACCTGTAGGTCAGGACCATCAGAGAGGCAAGGTTGCCCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp TCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGGGGAGAAGAGGGAGATaGCCTGCATCAGCACATACT +
Preference number: 4 (lower is better)
Translates to: SHTRTHSCSLCPCSYRLMGRRGR*PASAHT
Trigger: AGTATGTGCTGATGCAGGCCATCTCCCTCTTCTCCC...CATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CACCAAATCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGGGCATTGTCGGCTCTTaGCAGTGTCCATCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: HQITHTHSQLQFVPLLLQGIVGS*QCPSVL
Trigger: CAAGACAGATGGACACTGCCAAGAGCCGACAATGCC...CTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGATTTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp GGAAAGGGCAACCTTGCCTCTCTGATGGTCCTGACCTACAGGTCAGTGCACTCTCCACGTAAGAGTCTGTaGCTTCACTCCCTACAGACT +
Preference number: 4 (lower is better)
Translates to: GKGNLASLMVLTYRSVHSPRKSL*LHSLQT
Trigger: AGTCTGTAGGGAGTGAAGCCACAGACTCTTACGTGG...AGAGTGCACTGACCTGTAGGTCAGGACCATCAGAGAGGCAAGGTTGCCCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp GCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCTGCCGATGAGTGGAAGCGAACAAACGTaGGTATGTGGGCATAGACCC +
Preference number: 4 (lower is better)
Translates to: ASHLSRGLPQILMRLPMSGSEQT*VCGHRP
Trigger: GGGTCTATGCCCACATACCCACGTTTGTTCGCTTCC...ACTCATCGGCAGGCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp GCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCTGCCGATGAGTTTGGTGCAGGCCTCCTaGCTTCTCATCTCTCTAGAG +
Preference number: 4 (lower is better)
Translates to: ASHLSRGLPQILMRLPMSLVQAS*LLISLE
Trigger: CTCTAGAGAGATGAGAAGCCAGGAGGCCTGCACCAA...ACTCATCGGCAGGCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp TCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTTGGTGCAGGCCTCCTaGCTTCTCATCTCTCTAGAG +
Preference number: 4 (lower is better)
Translates to: SHTRTHSCSLCPCSYRLMLVQAS*LLISLE
Trigger: CTCTAGAGAGATGAGAAGCCAGGAGGCCTGCACCAA...CATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CAGTGCACTCTCCACGTAAGAGTCTGTGGCTTCACTCCCTACAGACTGAACTGGCAAGCTTCTGACATTTaGTGCAGGCCTCCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: QCTLHVRVCGFTPYRLNWQASDI*CRPPGF
Trigger: GAAGCCAGGAGGCCTGCACCAAATGTCAGAAGCTTG...CCAGTTCAGTCTGTAGGGAGTGAAGCCACAGACTCTTACGTGGAGAGTGCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CACCAAATCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGCCAGGCCCCATCAAGTaGCAAACAGACCTACCTACA +
Preference number: 4 (lower is better)
Translates to: HQITHTHSQLQFVPLLLQPGPIK*QTDLPT
Trigger: TGTAGGTAGGTCTGTTTGCCACTTGATGGGGCCTGG...CTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGATTTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp GCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCTGCCGATGAGTGACAGAAAGTTGACTTaGGCCTTAGGCAGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: ASHLSRGLPQILMRLPMSDRKLT*ALGRED
Trigger: GTCCTCCCTGCCTAAGGCCCAAGTCAACTTTCTGTC...ACTCATCGGCAGGCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR TCA 90 bp CACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACTCAAAGGTTTTCATCTaGGCGTCCATCAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: HSQLQFVPLLLQTHVLGNSKVFI*ASISSL
Trigger: CAGGGAGCTGATGGACGCTCAGATGAAAACCTTTGA...GTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp GCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCTGCCGATGAGTTCAAAGGTTTTCATCTaGGCGTCCATCAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: ASHLSRGLPQILMRLPMSSKVFI*ASISSL
Trigger: CAGGGAGCTGATGGACGCTCAGATGAAAACCTTTGA...ACTCATCGGCAGGCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp AGCAATGAAAAGACTCAGGAAGCGAACAAACGTGGGTATGTGGGCATAGACCCCCACCCATGTCCTTCCTaGGGAATGCTAGCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: SNEKTQEANKRGYVGIDPHPCPS*GMLASC
Trigger: ACAGCTGGCTAGCATTCCTCAGGAAGGACATGGGTG...GGGGTCTATGCCCACATACCCACGTTTGTTCGCTTCCTGAGTCTTTTCATTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp TCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTTGCTGGAAGCCACCTaGAGTGTCTTCCAAGCAGTA +
Preference number: 4 (lower is better)
Translates to: SHTRTHSCSLCPCSYRLMLLEAT*SVFQAV
Trigger: TACTGCTTGGAAGACACTGCAGGTGGCTTCCAGCAA...CATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp CAGTGCACTCTCCACGTAAGAGTCTGTGGCTTCACTCCCTACAGACTGAACTGGCAGGCTGGGGCCGATTaGATTCAATGTAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: QCTLHVRVCGFTPYRLNWQAGAD*IQCRTS
Trigger: TGAAGTCCTACATTGAATGCAATCGGCCCCAGCCTG...CCAGTTCAGTCTGTAGGGAGTGAAGCCACAGACTCTTACGTGGAGAGTGCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp CACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACTGCAGTTTGTGCCCTTaGTCCTACAGACTCATGTCC +
Preference number: 4 (lower is better)
Translates to: HSQLQFVPLLLQTHVLGNCSLCP*SYRLMS
Trigger: GGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCA...GTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp GCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCTGCCGATGAGTTGCAGTTTGTGCCCTTaGTCCTACAGACTCATGTCC +
Preference number: 4 (lower is better)
Translates to: ASHLSRGLPQILMRLPMSCSLCP*SYRLMS
Trigger: GGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCA...ACTCATCGGCAGGCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp GCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCTGCCGATGAGTTTCCCTAGCAGCAGGTaGTCCCAAGTGAACAGAATC +
Preference number: 4 (lower is better)
Translates to: ASHLSRGLPQILMRLPMSFPSSR*SQVNRI
Trigger: GATTCTGTTCACTTGGGAGCACCTGCTGCTAGGGAA...ACTCATCGGCAGGCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR CCA 90 bp TCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCAGTAGAAGTTGCTaGAAGCCACCTGCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: SHTRTHSCSLCPCSYRLMSSRSC*KPPAVS
Trigger: AGACACTGCAGGTGGCTTCCAGCAACTTCTACTGGA...CATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACGGAACGAGTGGGAAGTaGGAGACAGGACTATTAGAG +
Preference number: 4 (lower is better)
Translates to: HSQLQFVPLLLQTHVLGNGTSGK*ETGLLE
Trigger: CTCTAATAGTCCTGTCTCCCACTTCCCACTCGTTCC...GTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CAGTGCACTCTCCACGTAAGAGTCTGTGGCTTCACTCCCTACAGACTGAACTGGGGAACGAGTGGGAAGTaGGAGACAGGACTATTAGAG +
Preference number: 4 (lower is better)
Translates to: QCTLHVRVCGFTPYRLNWGTSGK*ETGLLE
Trigger: CTCTAATAGTCCTGTCTCCCACTTCCCACTCGTTCC...CCAGTTCAGTCTGTAGGGAGTGAAGCCACAGACTCTTACGTGGAGAGTGCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp GCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGACAGACTCATGTCCTTaGGAACCTTCACTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: ALAPTDSCPWEPSLGYPVTDSCP*EPSLGY
Trigger: GTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGT...CACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp GTATGTGGGCATAGACCCCAGATGGCCCATCCTTGGTCGCTTGGTCCCTTCCACTTGAAACCACCTCCCTaGATAGTGTTACTTGATGTG +
Preference number: 4 (lower is better)
Translates to: VCGHRPQMAHPWSLGPFHLKPPP*IVLLDV
Trigger: CACATCAAGTAACACTATCCAGGGAGGTGGTTTCAA...GTGGAAGGGACCAAGCGACCAAGGATGGGCCATCTGGGGTCTATGCCCACATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR TCA 90 bp CACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACTTTGAACATGTAGGTTaGCATGTCAGCCATGTGGGG +
Preference number: 4 (lower is better)
Translates to: HSQLQFVPLLLQTHVLGNFEHVG*HVSHVG
Trigger: CCCCACATGGCTGACATGTCAACCTACATGTTCAAA...GTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp TCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTTTGAACATGTAGGTTaGCATGTCAGCCATGTGGGG +
Preference number: 4 (lower is better)
Translates to: SHTRTHSCSLCPCSYRLMFEHVG*HVSHVG
Trigger: CCCCACATGGCTGACATGTCAACCTACATGTTCAAA...CATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp CACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACTTGCTTTTCTCACTGTaGACACTTGGCTTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: HSQLQFVPLLLQTHVLGNLLFSL*TLGLQA
Trigger: AGCCTGCAAGCCAAGTGTTCACAGTGAGAAAAGCAA...GTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp GCAGGCCTCCTGGCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCACAGTTGTCTTCAGGTaGACATTTGGACTTCCTTAC +
Preference number: 4 (lower is better)
Translates to: AGLLASHLSRGLPQILMRTVVFR*TFGLPY
Trigger: GTAAGGAAGTCCAAATGTTCACCTGAAGACAACTGT...GCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGCCAGGAGGCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR TCA 90 bp CCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCCAAAGTATTGATTTATaGCGGTGCCAATCACCAGCA +
Preference number: 4 (lower is better)
Translates to: PTDSCPWEPSLGYPVPAIQSIDL*RCQSPA
Trigger: TGCTGGTGATTGGCACCGTCATAAATCAATACTTTG...GATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR GCA 90 bp GATTTGACATTAAACCCAGGGCTACATTTCCCAAAACTAGTTCTTAGGTGTGGAGGCTCTGGGTCTGGCTaGCTCTCGGAGGTGTCACCC +
Preference number: 4 (lower is better)
Translates to: DLTLNPGLHFPKLVLRCGGSGSG*LSEVSP
Trigger: GGGTGACACCTCCGAGAGGCAGCCAGACCCAGAGCC...TCCACACCTAAGAACTAGTTTTGGGAAATGTAGCCCTGGGTTTAATGTCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp AGCAATGAAAAGACTCAGGAAGCGAACAAACGTGGGTATGTGGGCATAGACCCCAGGAAAGGGCAACCTTaGCTCTCTGATGGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: SNEKTQEANKRGYVGIDPRKGQP*LSDGPD
Trigger: GTCAGGACCATCAGAGAGGCAAGGTTGCCCTTTCCT...GGGGTCTATGCCCACATACCCACGTTTGTTCGCTTCCTGAGTCTTTTCATTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp CACCAAATCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGAGTGGATGCTTGCCTTaGTGTTTTCAACCAAGCGCA +
Preference number: 4 (lower is better)
Translates to: HQITHTHSQLQFVPLLLQSGCLP*CFQPSA
Trigger: TGCGCTTGGTTGAAAACAGCAAGGCAAGCATCCACT...CTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGATTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR GCA 90 bp GCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGGGGAGTGGAAGTAACTaGTCCTACCTAAAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: ALAPTDSCPWEPSLGYPVGSGSN*SYLKGK
Trigger: TTTGCCTTTTAGGTAGGAGCAGTTACTTCCACTCCC...CACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR CCA 90 bp AGCAATGAAAAGACTCAGGAAGCGAACAAACGTGGGTATGTGGGCATAGACCCCGGGAGAAGAGGGAGATaGCCTGCATCAGCACATACT +
Preference number: 4 (lower is better)
Translates to: SNEKTQEANKRGYVGIDPGRRGR*PASAHT
Trigger: AGTATGTGCTGATGCAGGCCATCTCCCTCTTCTCCC...GGGGTCTATGCCCACATACCCACGTTTGTTCGCTTCCTGAGTCTTTTCATTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCAAAAGGGGAAGAGAGTaGCAAATATCCGCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: PTDSCPWEPSLGYPVPAIKRGRE*QISALS
Trigger: AGACAAAGCGGATATTTGCCACTCTCTTCCCCTTTT...GATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR TCA 90 bp GATTTGACATTAAACCCAGGGCTACATTTCCCAAAACTAGTTCTTAGGTGTGGAAGCCGCTGGGTGTGCTaGGCATTGATGCTGCGGAGC +
Preference number: 4 (lower is better)
Translates to: DLTLNPGLHFPKLVLRCGSRWVC*ALMLRS
Trigger: GCTCCGCAGCATCAATGCTCAGCACACCCAGCGGCT...TCCACACCTAAGAACTAGTTTTGGGAAATGTAGCCCTGGGTTTAATGTCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp TACTCACAAGTGGCTATAAACAAGGCAGGCACTTTCATACCCTTTAGCTTTGAGGAGAGGGAAAGGGTGTaGGATGAGGGGGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: YSQVAINKAGTFIPFSFEERERV*DEGAEH
Trigger: GTGCTCAGCCCCCTCATCTCACACCCTTTCCCTCTC...CTCAAAGCTAAAGGGTATGAAAGTGCCTGCCTTGTTTATAGCCACTTGTGAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR TCA 90 bp CCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCCTGGATAGTGTTACTTaGTGTGAAAGTGAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: PTDSCPWEPSLGYPVPAILDSVT*CESEQS
Trigger: ACTTTGCTCACTTTCACATCAAGTAACACTATCCAG...GATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR GCA 90 bp AGCAATGAAAAGACTCAGGAAGCGAACAAACGTGGGTATGTGGGCATAGACCCCTTGCTGGAAGCCACCTaGAGTGTCTTCCAAGCAGTA +
Preference number: 4 (lower is better)
Translates to: SNEKTQEANKRGYVGIDPLLEAT*SVFQAV
Trigger: TACTGCTTGGAAGACACTGCAGGTGGCTTCCAGCAA...GGGGTCTATGCCCACATACCCACGTTTGTTCGCTTCCTGAGTCTTTTCATTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp TACTCACAAGTGGCTATAAACAAGGCAGGCACTTTCATACCCTTTAGCTTTGAGGGTGTATGTCCTGGATaGGCAGCAGCCGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: YSQVAINKAGTFIPFSFEGVCPG*AAAAGC
Trigger: ACACCCAGCGGCTGCTGCGCATCCAGGACATACACC...CTCAAAGCTAAAGGGTATGAAAGTGCCTGCCTTGTTTATAGCCACTTGTGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCAGTGGAATTTCAGCATaGGCTCCAGTAGAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: HSCSLCPCSYRLMSLGTFSGISA*APVEVA
Trigger: AGCAACTTCTACTGGAGCCCATGCTGAAATTCCACT...GAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp GCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCTGCCGATGAGTAGTGGAATTTCAGCATaGGCTCCAGTAGAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: ASHLSRGLPQILMRLPMSSGISA*APVEVA
Trigger: AGCAACTTCTACTGGAGCCCATGCTGAAATTCCACT...ACTCATCGGCAGGCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CTGCCGATGAGTACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAAAATAATGTGTTCAAATaGATGCAGAGACACAGAATG +
Preference number: 4 (lower is better)
Translates to: LPMSTGLEPTKQLGRGGENNVFK*MQRHRM
Trigger: CATTCTGTGTCTCTGCATCCATTTGAACACATTATT...TTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTACTCATCGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp TACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAACGAGTGGGAAGAATAATGTGTTCAAATaGATGCAGAGACACAGAATG +
Preference number: 4 (lower is better)
Translates to: YRPGAHKAARKRRGTSGKNNVFK*MQRHRM
Trigger: CATTCTGTGTCTCTGCATCCATTTGAACACATTATT...CTTCCCACTCGTTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CACCAAATCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGAGGGCTAGGAGGTATTaGATTACAAATCCCACTGGA +
Preference number: 4 (lower is better)
Translates to: HQITHTHSQLQFVPLLLQRARRY*ITNPTG
Trigger: TCCAGTGGGATTTGTAATCCAATACCTCCTAGCCCT...CTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGATTTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR CCA 90 bp GGAAAGGGCAACCTTGCCTCTCTGATGGTCCTGACCTACAGGTCAGTGCACTCTTATAAAGATGCTTTATaGCAGGTGAGGGGAGTGGAA +
Preference number: 4 (lower is better)
Translates to: GKGNLASLMVLTYRSVHSYKDAL*QVRGVE
Trigger: TTCCACTCCCCTCACCTGCCATAAAGCATCTTTATA...AGAGTGCACTGACCTGTAGGTCAGGACCATCAGAGAGGCAAGGTTGCCCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR TCA 90 bp GCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGTTCCAGTCACATTTCTaGTTATCCACATGGGATTCT +
Preference number: 4 (lower is better)
Translates to: ALAPTDSCPWEPSLGYPVFQSHF*LSTWDS
Trigger: AGAATCCCATGTGGATAATCAGAAATGTGACTGGAA...CACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR GCA 90 bp GATTTGACATTAAACCCAGGGCTACATTTCCCAAAACTAGTTCTTAGGTGTGGAATGGCGAATTGCTCCTaGAGCTGGTCCACCACGCGG +
Preference number: 4 (lower is better)
Translates to: DLTLNPGLHFPKLVLRCGMANCS*SWSTTR
Trigger: CCGCGTGGTGGACCAGCTGCAGGAGCAATTCGCCAT...TCCACACCTAAGAACTAGTTTTGGGAAATGTAGCCCTGGGTTTAATGTCAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp GCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCTGCCGATGAGTTCTCAAGTGGATGCTTaGCTTGCTGTTTTCAACCAA +
Preference number: 4 (lower is better)
Translates to: ASHLSRGLPQILMRLPMSSQVDA*LAVFNQ
Trigger: TTGGTTGAAAACAGCAAGGCAAGCATCCACTTGAGA...ACTCATCGGCAGGCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR CCA 90 bp TACTCACAAGTGGCTATAAACAAGGCAGGCACTTTCATACCCTTTAGCTTTGAGAGCTTCTTCCCTCGATaGGGCCTGCAGAGACTCTGG +
Preference number: 4 (lower is better)
Translates to: YSQVAINKAGTFIPFSFESFFPR*GLQRLW
Trigger: CCAGAGTCTCTGCAGGCCCCATCGAGGGAAGAAGCT...CTCAAAGCTAAAGGGTATGAAAGTGCCTGCCTTGTTTATAGCCACTTGTGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337940.4
ENST00000393716.8
CDS-3UTR CCA 90 bp TACTCACAAGTGGCTATAAACAAGGCAGGCACTTTCATACCCTTTAGCTTTGAGCAGATGGCCCATCCTTaGTCGCTTGGTCCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: YSQVAINKAGTFIPFSFEQMAHP*SLGPFH
Trigger: GTGGAAGGGACCAAGCGACCAAGGATGGGCCATCTG...CTCAAAGCTAAAGGGTATGAAAGTGCCTGCCTTGTTTATAGCCACTTGTGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp TACTCACAAGTGGCTATAAACAAGGCAGGCACTTTCATACCCTTTAGCTTTGAGGAGGAGGGGAACGAGTaGGAAGTGGGAGACAGGACT +
Preference number: 4 (lower is better)
Translates to: YSQVAINKAGTFIPFSFEEEGNE*EVGDRT
Trigger: AGTCCTGTCTCCCACTTCCCACTCGTTCCCCTCCTC...CTCAAAGCTAAAGGGTATGAAAGTGCCTGCCTTGTTTATAGCCACTTGTGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp GATTTGACATTAAACCCAGGGCTACATTTCCCAAAACTAGTTCTTAGGTGTGGACGTCCATCAGCTCCCTaGTCATCATCCGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: DLTLNPGLHFPKLVLRCGRPSAP*SSSAAP
Trigger: AGGAGCAGCGGATGATGATCAGGGAGCTGATGGACG...TCCACACCTAAGAACTAGTTTTGGGAAATGTAGCCCTGGGTTTAATGTCAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp GATTTGACATTAAACCCAGGGCTACATTTCCCAAAACTAGTTCTTAGGTGTGGACTGCCAGAGGGGAGCTaGAGAGTCCTCACTCTTCAG +
Preference number: 4 (lower is better)
Translates to: DLTLNPGLHFPKLVLRCGLPEGS*RVLTLQ
Trigger: CTGAAGAGTGAGGACTCTTCAGCTCCCCTCTGGCAG...TCCACACCTAAGAACTAGTTTTGGGAAATGTAGCCCTGGGTTTAATGTCAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR CCA 90 bp AGCAATGAAAAGACTCAGGAAGCGAACAAACGTGGGTATGTGGGCATAGACCCCAGTGGAATTTCAGCATaGGCTCCAGTAGAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: SNEKTQEANKRGYVGIDPSGISA*APVEVA
Trigger: AGCAACTTCTACTGGAGCCCATGCTGAAATTCCACT...GGGGTCTATGCCCACATACCCACGTTTGTTCGCTTCCTGAGTCTTTTCATTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp TACTCACAAGTGGCTATAAACAAGGCAGGCACTTTCATACCCTTTAGCTTTGAGCCATCCTTGGTCGCTTaGTCCCTTCCACACCTTGAC +
Preference number: 4 (lower is better)
Translates to: YSQVAINKAGTFIPFSFEPSLVA*SLPHLD
Trigger: GTCAAGGTGTGGAAGGGACCAAGCGACCAAGGATGG...CTCAAAGCTAAAGGGTATGAAAGTGCCTGCCTTGTTTATAGCCACTTGTGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp CCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCAATAATGTGTTCAAATaGATGCAGAGACACAGAATG +
Preference number: 4 (lower is better)
Translates to: PTDSCPWEPSLGYPVPAINNVFK*MQRHRM
Trigger: CATTCTGTGTCTCTGCATCCATTTGAACACATTATT...GATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp GATTTGACATTAAACCCAGGGCTACATTTCCCAAAACTAGTTCTTAGGTGTGGAGGTAGGAGGACAGCATaGGGCTATATCTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: DLTLNPGLHFPKLVLRCGGRRTA*GYIWGL
Trigger: CAGGCCCCAGATATAGCCCCATGCTGTCCTCCTACC...TCCACACCTAAGAACTAGTTTTGGGAAATGTAGCCCTGGGTTTAATGTCAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR CCA 90 bp CACCAAATCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGTTGACATTTCTCAAGTaGATGCTTGCCTTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: HQITHTHSQLQFVPLLLQLTFLK*MLALLF
Trigger: AAACAGCAAGGCAAGCATCCACTTGAGAAATGTCAA...CTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGATTTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR TCA 90 bp GATTTGACATTAAACCCAGGGCTACATTTCCCAAAACTAGTTCTTAGGTGTGGACACTTTTCTTCCGCTTaGTCAAGGCCCGCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: DLTLNPGLHFPKLVLRCGHFSSA*SRPASP
Trigger: AGGAGAGGCGGGCCTTGATCAAGCGGAAGAAAAGTG...TCCACACCTAAGAACTAGTTTTGGGAAATGTAGCCCTGGGTTTAATGTCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp GATTTGACATTAAACCCAGGGCTACATTTCCCAAAACTAGTTCTTAGGTGTGGACACCCATGTCCTTCCTaGGGAATGCTAGCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: DLTLNPGLHFPKLVLRCGHPCPS*GMLASC
Trigger: ACAGCTGGCTAGCATTCCTCAGGAAGGACATGGGTG...TCCACACCTAAGAACTAGTTTTGGGAAATGTAGCCCTGGGTTTAATGTCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp GATTTGACATTAAACCCAGGGCTACATTTCCCAAAACTAGTTCTTAGGTGTGGAGTCATGCCAAGCTTCTaGCATTTGGTGCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: DLTLNPGLHFPKLVLRCGVMPSF*HLVQAS
Trigger: GGAGGCCTGCACCAAATGTCAGAAGCTTGGCATGAC...TCCACACCTAAGAACTAGTTTTGGGAAATGTAGCCCTGGGTTTAATGTCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp TACTCACAAGTGGCTATAAACAAGGCAGGCACTTTCATACCCTTTAGCTTTGAGATGATGTGGCCGGAATaGGGTCATGCCAAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: YSQVAINKAGTFIPFSFEMMWPE*GHAKLL
Trigger: CAGAAGCTTGGCATGACCTCATTCCGGCCACATCAT...CTCAAAGCTAAAGGGTATGAAAGTGCCTGCCTTGTTTATAGCCACTTGTGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp TACTCACAAGTGGCTATAAACAAGGCAGGCACTTTCATACCCTTTAGCTTTGAGGTGACCCCACCACTTTaGTCTCAGAACAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: YSQVAINKAGTFIPFSFEVTPPL*SQNRRL
Trigger: CAGCCTTCTGTTCTGAGATCAAAGTGGTGGGGTCAC...CTCAAAGCTAAAGGGTATGAAAGTGCCTGCCTTGTTTATAGCCACTTGTGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR GCA 90 bp TACTCACAAGTGGCTATAAACAAGGCAGGCACTTTCATACCCTTTAGCTTTGAGTCTCACCTCCAGGTTTaGTTCTGGGCCTCTTGGACT +
Preference number: 4 (lower is better)
Translates to: YSQVAINKAGTFIPFSFESHLQV*FWASWT
Trigger: AGTCCAAGAGGCCCAGAAGCAAACCTGGAGGTGAGA...CTCAAAGCTAAAGGGTATGAAAGTGCCTGCCTTGTTTATAGCCACTTGTGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp TACTCACAAGTGGCTATAAACAAGGCAGGCACTTTCATACCCTTTAGCTTTGAGTTGGTGCAGGCCTCCTaGCTTCTCATCTCTCTAGAG +
Preference number: 4 (lower is better)
Translates to: YSQVAINKAGTFIPFSFELVQAS*LLISLE
Trigger: CTCTAGAGAGATGAGAAGCCAGGAGGCCTGCACCAA...CTCAAAGCTAAAGGGTATGAAAGTGCCTGCCTTGTTTATAGCCACTTGTGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp AGCAATGAAAAGACTCAGGAAGCGAACAAACGTGGGTATGTGGGCATAGACCCCAACAAAAGCCGAATGTaGTGGATACCAGGATGTGTT +
Preference number: 4 (lower is better)
Translates to: SNEKTQEANKRGYVGIDPNKSRM*WIPGCV
Trigger: AACACATCCTGGTATCCACCACATTCGGCTTTTGTT...GGGGTCTATGCCCACATACCCACGTTTGTTCGCTTCCTGAGTCTTTTCATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR TCA 90 bp GATTTGACATTAAACCCAGGGCTACATTTCCCAAAACTAGTTCTTAGGTGTGGAGGGATGAGAAAGACTTaGGGCTGGGATTTCCTAGGG +
Preference number: 4 (lower is better)
Translates to: DLTLNPGLHFPKLVLRCGGMRKT*GWDFLG
Trigger: CCCTAGGAAATCCCAGCCTCAAGTCTTTCTCATCCC...TCCACACCTAAGAACTAGTTTTGGGAAATGTAGCCCTGGGTTTAATGTCAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR TCA 90 bp TACTCACAAGTGGCTATAAACAAGGCAGGCACTTTCATACCCTTTAGCTTTGAGCAGTTCTCGAGAATGTaGCCCCACCACTTTGATCTC +
Preference number: 4 (lower is better)
Translates to: YSQVAINKAGTFIPFSFEQFSRM*PHHFDL
Trigger: GAGATCAAAGTGGTGGGGTCACATTCTCGAGAACTG...CTCAAAGCTAAAGGGTATGAAAGTGCCTGCCTTGTTTATAGCCACTTGTGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR GCA 90 bp GATTTGACATTAAACCCAGGGCTACATTTCCCAAAACTAGTTCTTAGGTGTGGAAGGAAAGGGCAACCTTaGCTCTCTGATGGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: DLTLNPGLHFPKLVLRCGRKGQP*LSDGPD
Trigger: GTCAGGACCATCAGAGAGGCAAGGTTGCCCTTTCCT...TCCACACCTAAGAACTAGTTTTGGGAAATGTAGCCCTGGGTTTAATGTCAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp GCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCTGCCGATGAGTGGAAATTCCTTGTGCTaGTTTTGTCACTTATCATTT +
Preference number: 4 (lower is better)
Translates to: ASHLSRGLPQILMRLPMSGNSLC*FCHLSF
Trigger: AAATGATAAGTGACAAAAGCAGCACAAGGAATTTCC...ACTCATCGGCAGGCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp CACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACGGAAATTCCTTGTGCTaGTTTTGTCACTTATCATTT +
Preference number: 4 (lower is better)
Translates to: HSQLQFVPLLLQTHVLGNGNSLC*FCHLSF
Trigger: AAATGATAAGTGACAAAAGCAGCACAAGGAATTTCC...GTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp CAGTGCACTCTCCACGTAAGAGTCTGTGGCTTCACTCCCTACAGACTGAACTGGGGAAATTCCTTGTGCTaGTTTTGTCACTTATCATTT +
Preference number: 4 (lower is better)
Translates to: QCTLHVRVCGFTPYRLNWGNSLC*FCHLSF
Trigger: AAATGATAAGTGACAAAAGCAGCACAAGGAATTTCC...CCAGTTCAGTCTGTAGGGAGTGAAGCCACAGACTCTTACGTGGAGAGTGCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp GATTTGACATTAAACCCAGGGCTACATTTCCCAAAACTAGTTCTTAGGTGTGGACAAGCTTCTGACATTTaGTGCAGGCCTCCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: DLTLNPGLHFPKLVLRCGQASDI*CRPPGF
Trigger: GAAGCCAGGAGGCCTGCACCAAATGTCAGAAGCTTG...TCCACACCTAAGAACTAGTTTTGGGAAATGTAGCCCTGGGTTTAATGTCAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR TCA 90 bp GATTTGACATTAAACCCAGGGCTACATTTCCCAAAACTAGTTCTTAGGTGTGGAGCAGGTGCTCCCAAGTaGACAGAATCAACAAAAGCC +
Preference number: 4 (lower is better)
Translates to: DLTLNPGLHFPKLVLRCGAGAPK*TESTKA
Trigger: GGCTTTTGTTGATTCTGTTCACTTGGGAGCACCTGC...TCCACACCTAAGAACTAGTTTTGGGAAATGTAGCCCTGGGTTTAATGTCAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR CCA 90 bp GATTTGACATTAAACCCAGGGCTACATTTCCCAAAACTAGTTCTTAGGTGTGGATCCAGTAGAAGTTGCTaGAAGCCACCTGCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: DLTLNPGLHFPKLVLRCGSSRSC*KPPAVS
Trigger: AGACACTGCAGGTGGCTTCCAGCAACTTCTACTGGA...TCCACACCTAAGAACTAGTTTTGGGAAATGTAGCCCTGGGTTTAATGTCAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp GATTTGACATTAAACCCAGGGCTACATTTCCCAAAACTAGTTCTTAGGTGTGGAACAGACTCATGTCCTTaGGAACCTTCACTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: DLTLNPGLHFPKLVLRCGTDSCP*EPSLGY
Trigger: GTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGT...TCCACACCTAAGAACTAGTTTTGGGAAATGTAGCCCTGGGTTTAATGTCAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR GCA 90 bp GATTTGACATTAAACCCAGGGCTACATTTCCCAAAACTAGTTCTTAGGTGTGGACTATATCTGAGTCAATaGTGTATACCCCACAGCAGG +
Preference number: 4 (lower is better)
Translates to: DLTLNPGLHFPKLVLRCGLYLSQ*CIPHSR
Trigger: CCTGCTGTGGGGTATACAGCATTGACTCAGATATAG...TCCACACCTAAGAACTAGTTTTGGGAAATGTAGCCCTGGGTTTAATGTCAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CCA 90 bp GATTTGACATTAAACCCAGGGCTACATTTCCCAAAACTAGTTCTTAGGTGTGGAAAAAGCCGAATGTGGTaGATACCAGGATGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: DLTLNPGLHFPKLVLRCGKSRMW*IPGCVS
Trigger: AGAAACACATCCTGGTATCCACCACATTCGGCTTTT...TCCACACCTAAGAACTAGTTTTGGGAAATGTAGCCCTGGGTTTAATGTCAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS TCA 90 bp ACTTGCGCAGGCGGCAGGCCTGGCACTGTCGCCGGGTCTTCCGGGTaGTCTCGCAGGCGCCCTTCCGGAAGGGGCACCTCAGCCGGGCGT +
Preference number: 5 (lower is better)
Translates to: TCAGGRPGTVAGSSG*SRRRPSGRGTSAGR
Trigger: ACGCCCGGCTGAGGTGCCCCTTCCGGAAGGGCGCCTGCGAGATCACCCGGAAGACCCGGCGACAGTGCCAGGCCTGCCGCCTGCGCAAGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
ENST00000474090.1
CDS GCA 90 bp CACACAAGCATGCCCACACCCACGGCACGTCCTTACTCAGAGCCGTaGACCCCGGCGCCGGCCCGCCCGCGCGCCCACTGCTCACTCTCC +
Preference number: 5 (lower is better)
Translates to: HTSMPTPTARPYSEP*TPAPARPRAHCSLS
Trigger: GGAGAGTGAGCAGTGGGCGCGCGGGCGGGCCGGCGCCGGGGTGCACGGCTCTGAGTAAGGACGTGCCGTGGGTGTGGGCATGCTTGTGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474090.1
CDS GCA 90 bp TACTCAGAGCCGTGCACCCCGGCGCCGGCCCGCCCGCGCGCCCACTaGTCACTCTCCTTCTTCATGCCGCTCTCCAGGCACTTGCGCAGG +
Preference number: 5 (lower is better)
Translates to: YSEPCTPAPARPRAH*SLSFFMPLSRHLRR
Trigger: CCTGCGCAAGTGCCTGGAGAGCGGCATGAAGAAGGAGAGTGAGCAGTGGGCGCGCGGGCGGGCCGGCGCCGGGGTGCACGGCTCTGAGTA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474090.1
CDS CCA 90 bp CAGTGTCCATCTGTCTTGGCCCGGGAGTGGCGGCTCAGAGGGCTCTaGGTCTGGCTGCCTCTCGGAGGTGTCACCCAAGGGCAGCCGCTC +
Preference number: 5 (lower is better)
Translates to: QCPSVLAREWRLRGL*VWLPLGGVTQGQPL
Trigger: GAGCGGCTGCCCTTGGGTGACACCTCCGAGAGGCAGCCAGACCCAGAGCCCTCTGAGCCGCCACTCCCGGGCCAAGACAGATGGACACTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
ENST00000493757.1
CDS GCA 90 bp CACGTGTGTTCACGCGCACACTCGGCGCGCATCTCCACACAAGCATaGCCACACCCACGGCACGTCCTTACTCAGAGCCGTGCACCCCGG +
Preference number: 5 (lower is better)
Translates to: HVCSRAHSARISTQA*PHPRHVLTQSRAPR
Trigger: CCGGGGTGCACGGCTCTGAGTAAGGACGTGCCGTGGGTGTGGGCATGCTTGTGTGGAGATGCGCGCCGAGTGTGCGCGTGAACACACGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474090.1
CDS GCA 90 bp CTCCCAGAGGGCCGACTGCAAGCGCTCCCCCAGGTGGCTGCCTGTTaGACACGGACACCAGCTCACATGTGCACGTGTGTTCACGCGCAC +
Preference number: 5 (lower is better)
Translates to: LPEGRLQALPQVAAC*TRTPAHMCTCVHAH
Trigger: GTGCGCGTGAACACACGTGCACATGTGAGCTGGTGTCCGTGTGCAACAGGCAGCCACCTGGGGGAGCGCTTGCAGTCGGCCCTCTGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474090.1
CDS GCA 90 bp CCAGGGCAGAGATTACCGACTCCCTCCATCTCCCAGAGGGCCGACTaGAAGCGCTCCCCCAGGTGGCTGCCTGTTGCACACGGACACCAG +
Preference number: 5 (lower is better)
Translates to: PGQRLPTPSISQRAD*KRSPRWLPVAHGHQ
Trigger: CTGGTGTCCGTGTGCAACAGGCAGCCACCTGGGGGAGCGCTTGCAGTCGGCCCTCTGGGAGATGGAGGGAGTCGGTAATCTCTGCCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474090.1
CDS-3UTR CAA 90 bp GTATGTGGGCATAGACCCCAGATGGCCCATCCTTGGTCGCTTGGTCCCTTCCACCCGCTCTCCAGGCACTaGCGCAGGCGGCAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: VCGHRPQMAHPWSLGPFHPLSRH*RRRQAW
Trigger: CCAGGCCTGCCGCCTGCGCAAGTGCCTGGAGAGCGG...GTGGAAGGGACCAAGCGACCAAGGATGGGCCATCTGGGGTCTATGCCCACATAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS CCA 90 bp ACTCCCTCCATCTCCCAGAGGGCCGACTGCAAGCGCTCCCCCAGGTaGCTGCCTGTTGCACACGGACACCAGCTCACATGTGCACGTGTG +
Preference number: 5 (lower is better)
Translates to: TPSISQRADCKRSPR*LPVAHGHQLTCARV
Trigger: CACACGTGCACATGTGAGCTGGTGTCCGTGTGCAACAGGCAGCCACCTGGGGGAGCGCTTGCAGTCGGCCCTCTGGGAGATGGAGGGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474090.1
CDS GCA 90 bp TTCCGGACCTGGCTCCACTTGGCAGCTTCTTCCCTCGATGGGGCCTaGAGAGACTCTGGCAACTCGCAGCCACTGCTAAGCACCCCTGGC +
Preference number: 5 (lower is better)
Translates to: FRTWLHLAASSLDGA*RDSGNSQPLLSTPG
Trigger: GCCAGGGGTGCTTAGCAGTGGCTGCGAGTTGCCAGAGTCTCTGCAGGCCCCATCGAGGGAAGAAGCTGCCAAGTGGAGCCAGGTCCGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000493757.1
CDS GCA 90 bp CTCCCCCAGGTGGCTGCCTGTTGCACACGGACACCAGCTCACATGTaGACGTGTGTTCACGCGCACACTCGGCGCGCATCTCCACACAAG +
Preference number: 5 (lower is better)
Translates to: LPQVAACCTRTPAHM*TCVHAHTRRASPHK
Trigger: CTTGTGTGGAGATGCGCGCCGAGTGTGCGCGTGAACACACGTGCACATGTGAGCTGGTGTCCGTGTGCAACAGGCAGCCACCTGGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474090.1
CDS GCA 90 bp CCTCCATCTCCCAGAGGGCCGACTGCAAGCGCTCCCCCAGGTGGCTaGCTGTTGCACACGGACACCAGCTCACATGTGCACGTGTGTTCA +
Preference number: 5 (lower is better)
Translates to: PPSPRGPTASAPPGG*LLHTDTSSHVHVCS
Trigger: TGAACACACGTGCACATGTGAGCTGGTGTCCGTGTGCAACAGGCAGCCACCTGGGGGAGCGCTTGCAGTCGGCCCTCTGGGAGATGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474090.1
CDS-3UTR CAA 90 bp CTGCCGATGAGTACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAACACCTCAGCCGGGCGTaGCGTTTCATGGCCCTCCTG +
Preference number: 5 (lower is better)
Translates to: LPMSTGLEPTKQLGRGGEHLSRA*RFMALL
Trigger: CAGGAGGGCCATGAAACGCAACGCCCGGCTGAGGTG...TTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTACTCATCGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS GCA 90 bp CACCCAAGGGCAGCCGCTCAGCTACCTGTGATGCCGAACAACTCCTaGATGAGGGGCGTAGCAAAGGGGTGTATGTCCTGGATGCGCAGC +
Preference number: 5 (lower is better)
Translates to: HPRAAAQLPVMPNNS*MRGVAKGCMSWMRS
Trigger: GCTGCGCATCCAGGACATACACCCCTTTGCTACGCCCCTCATGCAGGAGTTGTTCGGCATCACAGGTAGCTGAGCGGCTGCCCTTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
ENST00000493757.1
CDS CCA 90 bp GCTCCACTTGGCAGCTTCTTCCCTCGATGGGGCCTGCAGAGACTCTaGCAACTCGCAGCCACTGCTAAGCACCCCTGGCAGCCGGAAATT +
Preference number: 5 (lower is better)
Translates to: APLGSFFPRWGLQRL*QLAATAKHPWQPEI
Trigger: AATTTCCGGCTGCCAGGGGTGCTTAGCAGTGGCTGCGAGTTGCCAGAGTCTCTGCAGGCCCCATCGAGGGAAGAAGCTGCCAAGTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000493757.1
CDS-3UTR CAA 90 bp TACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAACGAGTGGGAAGCTTGGGAACCTTCACTaGGGTACCCAGTGCCCGCCA +
Preference number: 5 (lower is better)
Translates to: YRPGAHKAARKRRGTSGKLGNLH*GTQCPP
Trigger: TGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAG...CTTCCCACTCGTTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS GCA 90 bp TCTGGGCCTCTTGGATGGTTTGAAGCCAACTCAGCCGCAGCACTGTaGAGGGGTATGGCAGGTGCTCTGAGGGACCCCTCCTTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: SGPLGWFEANSAAAL*RGMAGALRDPSLKW
Trigger: CCACTTCAAGGAGGGGTCCCTCAGAGCACCTGCCATACCCCTGCACAGTGCTGCGGCTGAGTTGGCTTCAAACCATCCAAGAGGCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337940.4
CDS TCA 90 bp GCAAAGGGGTGTATGTCCTGGATGCGCAGCAGCCGCTGGGTGTGCTaGGCATTGATGCTGCGGAGCTCGGTGAGCATAGCCATGATCTTC +
Preference number: 5 (lower is better)
Translates to: AKGCMSWMRSSRWVC*ALMLRSSVSIAMIF
Trigger: GAAGATCATGGCTATGCTCACCGAGCTCCGCAGCATCAATGCTCAGCACACCCAGCGGCTGCTGCGCATCCAGGACATACACCCCTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
ENST00000493757.1
CDS CCA 90 bp CGCAGCTGCAGAGAGACCTTCAAAGAGCACAGATCTTTCCGGACCTaGCTCCACTTGGCAGCTTCTTCCCTCGATGGGGCCTGCAGAGAC +
Preference number: 5 (lower is better)
Translates to: RSCRETFKEHRSFRT*LHLAASSLDGACRD
Trigger: GTCTCTGCAGGCCCCATCGAGGGAAGAAGCTGCCAAGTGGAGCCAGGTCCGGAAAGATCTGTGCTCTTTGAAGGTCTCTCTGCAGCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000493757.1
CDS-3UTR CAA 90 bp TACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAACGAGTGGGAAGGTCTCACCTCCAGGTTaGCTTCTGGGCCTCTTGGAT +
Preference number: 5 (lower is better)
Translates to: YRPGAHKAARKRRGTSGKVSPPG*LLGLLD
Trigger: ATCCAAGAGGCCCAGAAGCAAACCTGGAGGTGAGAC...CTTCCCACTCGTTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337940.4
CDS-3UTR CAA 90 bp CACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCACCTCAGCCGGGCGTaGCGTTTCATGGCCCTCCTG +
Preference number: 5 (lower is better)
Translates to: HSQLQFVPLLLQTHVLGNHLSRA*RFMALL
Trigger: CAGGAGGGCCATGAAACGCAACGCCCGGCTGAGGTG...GTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp GCAGGCCTCCTGGCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCGGACCTGGCTCCACTaGGCAGCTTCTTCCCTCGAT +
Preference number: 5 (lower is better)
Translates to: AGLLASHLSRGLPQILMRRTWLH*AASSLD
Trigger: ATCGAGGGAAGAAGCTGCCAAGTGGAGCCAGGTCCG...GCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGCCAGGAGGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337940.4
ENST00000393716.8
CDS-3UTR CAA 90 bp GCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCTGCCGATGAGTCAGTGTCCATCTGTCTaGGCCCGGGAGTGGCGGCTC +
Preference number: 5 (lower is better)
Translates to: ASHLSRGLPQILMRLPMSQCPSV*AREWRL
Trigger: GAGCCGCCACTCCCGGGCCAAGACAGATGGACACTG...ACTCATCGGCAGGCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS TCA 90 bp CCAGCTGAGGGCTCTTTCCTCTCCCGGGTCCTGCCAGAGGGGAGCTaGAGAGTCCTCACTCTTCAGCCTCAACCTTCTTATTCCCTAGCA +
Preference number: 5 (lower is better)
Translates to: PAEGSFLSRVLPEGS*RVLTLQPQPSYSLA
Trigger: TGCTAGGGAATAAGAAGGTTGAGGCTGAAGAGTGAGGACTCTTCAGCTCCCCTCTGGCAGGACCCGGGAGAGGAAAGAGCCCTCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS TCA 90 bp AGAGATGAGGTGAGGCTGGTGTTTTGCCCTCTGCAGTGGAGTTTGTaGGGACACTGTGGGGCCCTGGCAAGAGCACGGGCTTCAGAATCC +
Preference number: 5 (lower is better)
Translates to: RDEVRLVFCPLQWSL*GHCGALARARASES
Trigger: GGATTCTGAAGCCCGTGCTCTTGCCAGGGCCCCACAGTGTCCTCACAAACTCCACTGCAGAGGGCAAAACACCAGCCTCACCTCATCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493757.1
CDS-3UTR CAA 90 bp CTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCACAGCTCAGCATCCACGGGCATTGTCGGCTCTaGGCAGTGTCCATCTGTCTT +
Preference number: 5 (lower is better)
Translates to: LGNLHLGTQCPPSQLSIHGHCRL*AVSICL
Trigger: AAGACAGATGGACACTGCCAAGAGCCGACAATGCCC...GTGGATGCTGAGCTGTGATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp CACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCAGGCCAGCAGGGCATaGTCGGCTCTTGGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: HSQLQFVPLLLQTHVLGNQASRA*SALGSV
Trigger: GACACTGCCAAGAGCCGACAATGCCCTGCTGGCCTG...GTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp GGAAAGGGCAACCTTGCCTCTCTGATGGTCCTGACCTACAGGTCAGTGCACTCTCCAGATGGCCCATCCTaGGTCGCTTGGTCCCTTCCA +
Preference number: 5 (lower is better)
Translates to: GKGNLASLMVLTYRSVHSPDGPS*VAWSLP
Trigger: TGGAAGGGACCAAGCGACCAAGGATGGGCCATCTGG...AGAGTGCACTGACCTGTAGGTCAGGACCATCAGAGAGGCAAGGTTGCCCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp GCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCTTGGGAACCTTCACTaGGGTACCCAGTGCCCGCCA +
Preference number: 5 (lower is better)
Translates to: ALAPTDSCPWEPSLGYPVLGNLH*GTQCPP
Trigger: TGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAG...CACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp CTGCCGATGAGTACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAACTGCAGTTTGTGCCCTaGCTCCTACAGACTCATGTC +
Preference number: 5 (lower is better)
Translates to: LPMSTGLEPTKQLGRGGELQFVP*LLQTHV
Trigger: GACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAG...TTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTACTCATCGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp GCAGGCCTCCTGGCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCTCTCACTGTGAACACTaGGCTTGCAGGCTGAGGCCG +
Preference number: 5 (lower is better)
Translates to: AGLLASHLSRGLPQILMRSHCEH*ACRLRP
Trigger: CGGCCTCAGCCTGCAAGCCAAGTGTTCACAGTGAGA...GCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGCCAGGAGGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp TACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAACGAGTGGGAAGGGCCTCTTGGACTGCTaGGTGGTAAGTTCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: YRPGAHKAARKRRGTSGKGLLDC*VVSSLL
Trigger: GAGCAAAGAACTTACCACCAAGCAGTCCAAGAGGCC...CTTCCCACTCGTTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393716.8
ENST00000466380.6
CDS TCA 90 bp TCCCAGGTTCCAGTCTCCGCGTTGAACACTGTGTTGAATCTCAGTTaGCACAGCTCGAAAGCGGCCCCCTTCAGCAGGGAGATCTGGTCC +
Preference number: 5 (lower is better)
Translates to: SQVPVSALNTVLNLS*HSSKAAPFSREIWS
Trigger: GGACCAGATCTCCCTGCTGAAGGGGGCCGCTTTCGAGCTGTGTCAACTGAGATTCAACACAGTGTTCAACGCGGAGACTGGAACCTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
ENST00000493757.1
CDS CCA 90 bp GAGAGACCTTCAAAGAGCACAGATCTTTCCGGACCTGGCTCCACTTaGCAGCTTCTTCCCTCGATGGGGCCTGCAGAGACTCTGGCAACT +
Preference number: 5 (lower is better)
Translates to: ERPSKSTDLSGPGST*QLLPSMGPAETLAT
Trigger: AGTTGCCAGAGTCTCTGCAGGCCCCATCGAGGGAAGAAGCTGCCAAGTGGAGCCAGGTCCGGAAAGATCTGTGCTCTTTGAAGGTCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000493757.1
CDS CCA 90 bp CTGTGGGGCCCTGGCAAGAGCACGGGCTTCAGAATCCAAAGGCGCTaGGTTTGCATGAAAGCTTTGCCACTTACTACCTGTGACCCCAAG +
Preference number: 5 (lower is better)
Translates to: LWGPGKSTGFRIQRR*VCMKALPLTTCDPK
Trigger: CTTGGGGTCACAGGTAGTAAGTGGCAAAGCTTTCATGCAAACCCAGCGCCTTTGGATTCTGAAGCCCGTGCTCTTGCCAGGGCCCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493757.1
CDS CCA 90 bp TGTTTTGCCCTCTGCAGTGGAGTTTGTGAGGACACTGTGGGGCCCTaGCAAGAGCACGGGCTTCAGAATCCAAAGGCGCTGGGTTTGCAT +
Preference number: 5 (lower is better)
Translates to: CFALCSGVCEDTVGP*QEHGLQNPKALGLH
Trigger: ATGCAAACCCAGCGCCTTTGGATTCTGAAGCCCGTGCTCTTGCCAGGGCCCCACAGTGTCCTCACAAACTCCACTGCAGAGGGCAAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493757.1
CDS-3UTR CAA 90 bp AGCAATGAAAAGACTCAGGAAGCGAACAAACGTGGGTATGTGGGCATAGACCCCCACCTCAGCCGGGCGTaGCGTTTCATGGCCCTCCTG +
Preference number: 5 (lower is better)
Translates to: SNEKTQEANKRGYVGIDPHLSRA*RFMALL
Trigger: CAGGAGGGCCATGAAACGCAACGCCCGGCTGAGGTG...GGGGTCTATGCCCACATACCCACGTTTGTTCGCTTCCTGAGTCTTTTCATTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp GCAGGCCTCCTGGCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCTCACTTTTCTTCCGCTaGATCAAGGCCCGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: AGLLASHLSRGLPQILMRSLFFR*IKARLS
Trigger: GGAGAGGCGGGCCTTGATCAAGCGGAAGAAAAGTGA...GCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGCCAGGAGGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp TCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGCGGACCTGGCTCCACTaGGCAGCTTCTTCCCTCGAT +
Preference number: 5 (lower is better)
Translates to: SHTRTHSCSLCPCSYRLMRTWLH*AASSLD
Trigger: ATCGAGGGAAGAAGCTGCCAAGTGGAGCCAGGTCCG...CATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337940.4
ENST00000393716.8
CDS-3UTR CAA 90 bp CACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCCCAGATGGCCCATCCTaGGTCGCTTGGTCCCTTCCA +
Preference number: 5 (lower is better)
Translates to: HSCSLCPCSYRLMSLGTFPDGPS*VAWSLP
Trigger: TGGAAGGGACCAAGCGACCAAGGATGGGCCATCTGG...GAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp CAGTGCACTCTCCACGTAAGAGTCTGTGGCTTCACTCCCTACAGACTGAACTGGCCAGATGGCCCATCCTaGGTCGCTTGGTCCCTTCCA +
Preference number: 5 (lower is better)
Translates to: QCTLHVRVCGFTPYRLNWPDGPS*VAWSLP
Trigger: TGGAAGGGACCAAGCGACCAAGGATGGGCCATCTGG...CCAGTTCAGTCTGTAGGGAGTGAAGCCACAGACTCTTACGTGGAGAGTGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp GTATGTGGGCATAGACCCCAGATGGCCCATCCTTGGTCGCTTGGTCCCTTCCACATTGTCAGCGTAGCCTaGTCACAGAGCATACCCAGC +
Preference number: 5 (lower is better)
Translates to: VCGHRPQMAHPWSLGPFHIVSVA*SQSIPS
Trigger: GCTGGGTATGCTCTGTGACAAGGCTACGCTGACAAT...GTGGAAGGGACCAAGCGACCAAGGATGGGCCATCTGGGGTCTATGCCCACATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp CTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCACAGCTCAGCATCCACTTGGTGGTAAGTTCTTaGCTCCGACTTCTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: LGNLHLGTQCPPSQLSIHLVVSS*LRLLPW
Trigger: CCAGGGGAGAAGTCGGAGCAAAGAACTTACCACCAA...GTGGATGCTGAGCTGTGATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp CCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCCCACTGGACAGAAAGTaGACTTGGGCCTTAGGCAGG +
Preference number: 5 (lower is better)
Translates to: PTDSCPWEPSLGYPVPAIPLDRK*TWALGR
Trigger: CCTGCCTAAGGCCCAAGTCAACTTTCTGTCCAGTGG...GATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS GCA 90 bp GTCCCCACATACACGGCAGATTTGGGGACCTCCGACTTCCTCATCTaGGTTGACACTGGGCTTTCCAGGAACAGACTCTGTGTCCTCACA +
Preference number: 5 (lower is better)
Translates to: VPTYTADLGTSDFLI*VDTGLSRNRLCVLT
Trigger: TGTGAGGACACAGAGTCTGTTCCTGGAAAGCCCAGTGTCAACGCAGATGAGGAAGTCGGAGGTCCCCAAATCTGCCGTGTATGTGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
ENST00000474090.1
CDS GCA 90 bp GGCCCTGGCAAGAGCACGGGCTTCAGAATCCAAAGGCGCTGGGTTTaGATGAAAGCTTTGCCACTTACTACCTGTGACCCCAAGCAACCT +
Preference number: 5 (lower is better)
Translates to: GPGKSTGFRIQRRWV*MKALPLTTCDPKQP
Trigger: AGGTTGCTTGGGGTCACAGGTAGTAAGTGGCAAAGCTTTCATGCAAACCCAGCGCCTTTGGATTCTGAAGCCCGTGCTCTTGCCAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493757.1
CDS-3UTR CAA 90 bp CACCAAATCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGGGCCTCTTGGATGGTTaGAAGCCAACTCAGCCGCAG +
Preference number: 5 (lower is better)
Translates to: HQITHTHSQLQFVPLLLQGLLDG*KPTQPQ
Trigger: CTGCGGCTGAGTTGGCTTCAAACCATCCAAGAGGCC...CTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGATTTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337940.4
CDS-3UTR CAA 90 bp CTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCACAGCTCAGCATCCACTGGTTCCAGCTTTCTTaGGGTCTCACCTCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: LGNLHLGTQCPPSQLSIHWFQLS*GLTSRF
Trigger: AAACCTGGAGGTGAGACCCAAAGAAAGCTGGAACCA...GTGGATGCTGAGCTGTGATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp GGAAAGGGCAACCTTGCCTCTCTGATGGTCCTGACCTACAGGTCAGTGCACTCTACATACACGGCAGATTaGGGGACCTCCGACTTCCTC +
Preference number: 5 (lower is better)
Translates to: GKGNLASLMVLTYRSVHSTYTAD*GTSDFL
Trigger: GAGGAAGTCGGAGGTCCCCAAATCTGCCGTGTATGT...AGAGTGCACTGACCTGTAGGTCAGGACCATCAGAGAGGCAAGGTTGCCCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp GTATGTGGGCATAGACCCCAGATGGCCCATCCTTGGTCGCTTGGTCCCTTCCACGGCAGCCGGAAATTCTaGAAATGGGAGAAGGTAGTG +
Preference number: 5 (lower is better)
Translates to: VCGHRPQMAHPWSLGPFHGSRKF*KWEKVV
Trigger: CACTACCTTCTCCCATTTCAAGAATTTCCGGCTGCC...GTGGAAGGGACCAAGCGACCAAGGATGGGCCATCTGGGGTCTATGCCCACATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337940.4
ENST00000393716.8
CDS-3UTR CAA 90 bp CTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCACAGCTCAGCATCCACGGCAGCCGGAAATTCTaGAAATGGGAGAAGGTAGTG +
Preference number: 5 (lower is better)
Translates to: LGNLHLGTQCPPSQLSIHGSRKF*KWEKVV
Trigger: CACTACCTTCTCCCATTTCAAGAATTTCCGGCTGCC...GTGGATGCTGAGCTGTGATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337940.4
ENST00000393716.8
CDS-3UTR CAA 90 bp GTATGTGGGCATAGACCCCAGATGGCCCATCCTTGGTCGCTTGGTCCCTTCCACTGTGTTGAATCTCAGTaGACACAGCTCGAAAGCGGC +
Preference number: 5 (lower is better)
Translates to: VCGHRPQMAHPWSLGPFHCVESQ*TQLESG
Trigger: GCCGCTTTCGAGCTGTGTCAACTGAGATTCAACACA...GTGGAAGGGACCAAGCGACCAAGGATGGGCCATCTGGGGTCTATGCCCACATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp GTATGTGGGCATAGACCCCAGATGGCCCATCCTTGGTCGCTTGGTCCCTTCCACGTTCCAGTCTCCGCGTaGAACACTGTGTTGAATCTC +
Preference number: 5 (lower is better)
Translates to: VCGHRPQMAHPWSLGPFHVPVSA*NTVLNL
Trigger: GAGATTCAACACAGTGTTCAACGCGGAGACTGGAAC...GTGGAAGGGACCAAGCGACCAAGGATGGGCCATCTGGGGTCTATGCCCACATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp AGCAATGAAAAGACTCAGGAAGCGAACAAACGTGGGTATGTGGGCATAGACCCCCAGGCCAGCAGGGCATaGTCGGCTCTTGGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: SNEKTQEANKRGYVGIDPQASRA*SALGSV
Trigger: GACACTGCCAAGAGCCGACAATGCCCTGCTGGCCTG...GGGGTCTATGCCCACATACCCACGTTTGTTCGCTTCCTGAGTCTTTTCATTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp GCAGGCCTCCTGGCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCTGCAGTTTGTGCCCTaGCTCCTACAGACTCATGTC +
Preference number: 5 (lower is better)
Translates to: AGLLASHLSRGLPQILMRLQFVP*LLQTHV
Trigger: GACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAG...GCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGCCAGGAGGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp GCAGGCCTCCTGGCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCACTCACAGCTGCAGTTaGTGCCCTTGCTCCTACAGA +
Preference number: 5 (lower is better)
Translates to: AGLLASHLSRGLPQILMRTHSCS*CPCSYR
Trigger: TCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGT...GCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGCCAGGAGGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp CCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCATTGTCAGCGTAGCCTaGTCACAGAGCATACCCAGC +
Preference number: 5 (lower is better)
Translates to: PTDSCPWEPSLGYPVPAIIVSVA*SQSIPS
Trigger: GCTGGGTATGCTCTGTGACAAGGCTACGCTGACAAT...GATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp GCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCTGCCGATGAGTTCTCACTGTGAACACTaGGCTTGCAGGCTGAGGCCG +
Preference number: 5 (lower is better)
Translates to: ASHLSRGLPQILMRLPMSSHCEH*ACRLRP
Trigger: CGGCCTCAGCCTGCAAGCCAAGTGTTCACAGTGAGA...ACTCATCGGCAGGCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp TCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGCCCCTGGGGTCCACTTaGAACAATCCGGTGCAAAGG +
Preference number: 5 (lower is better)
Translates to: SHTRTHSCSLCPCSYRLMPLGST*NNPVQR
Trigger: CCTTTGCACCGGATTGTTCAAAGTGGACCCCAGGGG...CATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp GCAGGCCTCCTGGCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCGGCCTCTTGGACTGCTaGGTGGTAAGTTCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: AGLLASHLSRGLPQILMRGLLDC*VVSSLL
Trigger: GAGCAAAGAACTTACCACCAAGCAGTCCAAGAGGCC...GCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGCCAGGAGGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp CCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCTTGCTTCTGGGCCTCTaGGACTGCTTGGTGGTAAGT +
Preference number: 5 (lower is better)
Translates to: PTDSCPWEPSLGYPVPAILLLGL*DCLVVS
Trigger: ACTTACCACCAAGCAGTCCAAGAGGCCCAGAAGCAA...GATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp TCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGGTCTCACCTCCAGGTTaGCTTCTGGGCCTCTTGGAC +
Preference number: 5 (lower is better)
Translates to: SHTRTHSCSLCPCSYRLMVSPPG*LLGLLD
Trigger: GTCCAAGAGGCCCAGAAGCAAACCTGGAGGTGAGAC...CATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp GTATGTGGGCATAGACCCCAGATGGCCCATCCTTGGTCGCTTGGTCCCTTCCACAGGGATGAGAAAGACTaGAGGCTGGGATTTCCTAGG +
Preference number: 5 (lower is better)
Translates to: VCGHRPQMAHPWSLGPFHRDEKD*RLGFPR
Trigger: CCTAGGAAATCCCAGCCTCAAGTCTTTCTCATCCCT...GTGGAAGGGACCAAGCGACCAAGGATGGGCCATCTGGGGTCTATGCCCACATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS CCA 90 bp ATACTGGATTTCAGTACCAGTGGAAGTAGCCTGAACAGTGTGCTCTaGGGTAGGAGGACAGCATGGGGCTATATCTGGGGCCTGCAGGTC +
Preference number: 5 (lower is better)
Translates to: ILDFSTSGSSLNSVL*GRRTAWGYIWGLQV
Trigger: GACCTGCAGGCCCCAGATATAGCCCCATGCTGTCCTCCTACCCCAGAGCACACTGTTCAGGCTACTTCCACTGGTACTGAAATCCAGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR CAA 90 bp CAGTGCACTCTCCACGTAAGAGTCTGTGGCTTCACTCCCTACAGACTGAACTGGACATACACGGCAGATTaGGGGACCTCCGACTTCCTC +
Preference number: 5 (lower is better)
Translates to: QCTLHVRVCGFTPYRLNWTYTAD*GTSDFL
Trigger: GAGGAAGTCGGAGGTCCCCAAATCTGCCGTGTATGT...CCAGTTCAGTCTGTAGGGAGTGAAGCCACAGACTCTTACGTGGAGAGTGCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp GATTTGACATTAAACCCAGGGCTACATTTCCCAAAACTAGTTCTTAGGTGTGGACCGCTCTCCAGGCACTaGCGCAGGCGGCAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: DLTLNPGLHFPKLVLRCGPLSRH*RRRQAW
Trigger: CCAGGCCTGCCGCCTGCGCAAGTGCCTGGAGAGCGG...TCCACACCTAAGAACTAGTTTTGGGAAATGTAGCCCTGGGTTTAATGTCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp TCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCACTTTTCTTCCGCTaGATCAAGGCCCGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: SHTRTHSCSLCPCSYRLMSLFFR*IKARLS
Trigger: GGAGAGGCGGGCCTTGATCAAGCGGAAGAAAAGTGA...CATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp CACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACTCACTTTTCTTCCGCTaGATCAAGGCCCGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: HSQLQFVPLLLQTHVLGNSLFFR*IKARLS
Trigger: GGAGAGGCGGGCCTTGATCAAGCGGAAGAAAAGTGA...GTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp GCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCTGCCGATGAGTCAGAGTAATGGCGAATaGCTCCTGCAGCTGGTCCAC +
Preference number: 5 (lower is better)
Translates to: ASHLSRGLPQILMRLPMSQSNGE*LLQLVH
Trigger: GTGGACCAGCTGCAGGAGCAATTCGCCATTACTCTG...ACTCATCGGCAGGCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp CAGTGCACTCTCCACGTAAGAGTCTGTGGCTTCACTCCCTACAGACTGAACTGGGGGCATTGTCGGCTCTaGGCAGTGTCCATCTGTCTT +
Preference number: 5 (lower is better)
Translates to: QCTLHVRVCGFTPYRLNWGHCRL*AVSICL
Trigger: AAGACAGATGGACACTGCCAAGAGCCGACAATGCCC...CCAGTTCAGTCTGTAGGGAGTGAAGCCACAGACTCTTACGTGGAGAGTGCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp GGAAAGGGCAACCTTGCCTCTCTGATGGTCCTGACCTACAGGTCAGTGCACTCTCTGCAGTTTGTGCCCTaGCTCCTACAGACTCATGTC +
Preference number: 5 (lower is better)
Translates to: GKGNLASLMVLTYRSVHSLQFVP*LLQTHV
Trigger: GACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAG...AGAGTGCACTGACCTGTAGGTCAGGACCATCAGAGAGGCAAGGTTGCCCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp CTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCACAGCTCAGCATCCACAGAGGGAGACCACGATaGAGCAAACAGGTAGAAAAG +
Preference number: 5 (lower is better)
Translates to: LGNLHLGTQCPPSQLSIHRGRPR*SKQVEK
Trigger: CTTTTCTACCTGTTTGCTCAATCGTGGTCTCCCTCT...GTGGATGCTGAGCTGTGATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS TCA 90 bp CCAAAGGCGCTGGGTTTGCATGAAAGCTTTGCCACTTACTACCTGTaGCCCCAAGCAACCTCCTTAACCTCTCCTGCCTCCAGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: PKALGLHESFATYYL*PQATSLTSPASRFL
Trigger: GAGAAACCTGGAGGCAGGAGAGGTTAAGGAGGTTGCTTGGGGTCACAGGTAGTAAGTGGCAAAGCTTTCATGCAAACCCAGCGCCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493757.1
CDS TCA 90 bp CTGGCAAGAGCACGGGCTTCAGAATCCAAAGGCGCTGGGTTTGCATaGAAGCTTTGCCACTTACTACCTGTGACCCCAAGCAACCTCCTT +
Preference number: 5 (lower is better)
Translates to: LARARASESKGAGFA*KLCHLLPVTPSNLL
Trigger: AAGGAGGTTGCTTGGGGTCACAGGTAGTAAGTGGCAAAGCTTTCATGCAAACCCAGCGCCTTTGGATTCTGAAGCCCGTGCTCTTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493757.1
CDS TCA 90 bp TGTGGGCTCTTCTGGAGAAACACTTGGGTGAGGACAGAGATGAGGTaGGGCTGGTGTTTTGCCCTCTGCAGTGGAGTTTGTGAGGACACT +
Preference number: 5 (lower is better)
Translates to: CGLFWRNTWVRTEMR*GWCFALCSGVCEDT
Trigger: AGTGTCCTCACAAACTCCACTGCAGAGGGCAAAACACCAGCCTCACCTCATCTCTGTCCTCACCCAAGTGTTTCTCCAGAAGAGCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493757.1
CDS-3UTR CAA 90 bp CACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCACTTCCTCATCTGCGTaGACACTGGGCTTTCCAGGA +
Preference number: 5 (lower is better)
Translates to: HSCSLCPCSYRLMSLGTFTSSSA*TLGFPG
Trigger: TCCTGGAAAGCCCAGTGTCAACGCAGATGAGGAAGT...GAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp CACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACACTTCCTCATCTGCGTaGACACTGGGCTTTCCAGGA +
Preference number: 5 (lower is better)
Translates to: HSQLQFVPLLLQTHVLGNTSSSA*TLGFPG
Trigger: TCCTGGAAAGCCCAGTGTCAACGCAGATGAGGAAGT...GTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp CTGCCGATGAGTACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAAACACAGGGAAATTCCTaGTGCTGCTTTTGTCACTTA +
Preference number: 5 (lower is better)
Translates to: LPMSTGLEPTKQLGRGGETQGNS*CCFCHL
Trigger: TAAGTGACAAAAGCAGCACAAGGAATTTCCCTGTGT...TTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTACTCATCGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp GCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCTGCCGATGAGTATTGTCAGCGTAGCCTaGTCACAGAGCATACCCAGC +
Preference number: 5 (lower is better)
Translates to: ASHLSRGLPQILMRLPMSIVSVA*SQSIPS
Trigger: GCTGGGTATGCTCTGTGACAAGGCTACGCTGACAAT...ACTCATCGGCAGGCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp CAGTGCACTCTCCACGTAAGAGTCTGTGGCTTCACTCCCTACAGACTGAACTGGTTGGTGGTAAGTTCTTaGCTCCGACTTCTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: QCTLHVRVCGFTPYRLNWLVVSS*LRLLPW
Trigger: CCAGGGGAGAAGTCGGAGCAAAGAACTTACCACCAA...CCAGTTCAGTCTGTAGGGAGTGAAGCCACAGACTCTTACGTGGAGAGTGCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp CACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACTTGCTTCTGGGCCTCTaGGACTGCTTGGTGGTAAGT +
Preference number: 5 (lower is better)
Translates to: HSQLQFVPLLLQTHVLGNLLLGL*DCLVVS
Trigger: ACTTACCACCAAGCAGTCCAAGAGGCCCAGAAGCAA...GTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393716.8
ENST00000466380.6
CDS CCA 90 bp CCTCATGCAGCTGCAGCTTCTTCAGCATGTAGTGGAATTTCAGCATaGGCTCCAGTAGAAGTTGCTGGAAGCCACCTGCAGTGTCTTCCA +
Preference number: 5 (lower is better)
Translates to: PHAAAASSACSGISA*APVEVAGSHLQCLP
Trigger: TGGAAGACACTGCAGGTGGCTTCCAGCAACTTCTACTGGAGCCCATGCTGAAATTCCACTACATGCTGAAGAAGCTGCAGCTGCATGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
ENST00000493757.1
CDS CCA 90 bp CTGTGTCCTCACAGTGTACAAAGTCAGCATGGTTCCAGCTTTCTTTaGGTCTCACCTCCAGGTTTGCTTCTGGGCCTCTTGGACTGCTTG +
Preference number: 5 (lower is better)
Translates to: LCPHSVQSQHGSSFL*VSPPGLLLGLLDCL
Trigger: CAAGCAGTCCAAGAGGCCCAGAAGCAAACCTGGAGGTGAGACCCAAAGAAAGCTGGAACCATGCTGACTTTGTACACTGTGAGGACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393716.8
ENST00000466380.6
ENST00000474090.1
CDS-3UTR CAA 90 bp TACTCACAAGTGGCTATAAACAAGGCAGGCACTTTCATACCCTTTAGCTTTGAGGTCATGCTGCTGTCCTaGGCCTCAGGGGGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: YSQVAINKAGTFIPFSFEVMLLS*ASGGCQ
Trigger: CTGGCAGCCCCCTGAGGCCAAGGACAGCAGCATGAC...CTCAAAGCTAAAGGGTATGAAAGTGCCTGCCTTGTTTATAGCCACTTGTGAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337940.4
CDS-3UTR CAA 90 bp AGCAATGAAAAGACTCAGGAAGCGAACAAACGTGGGTATGTGGGCATAGACCCCACATACACGGCAGATTaGGGGACCTCCGACTTCCTC +
Preference number: 5 (lower is better)
Translates to: SNEKTQEANKRGYVGIDPTYTAD*GTSDFL
Trigger: GAGGAAGTCGGAGGTCCCCAAATCTGCCGTGTATGT...GGGGTCTATGCCCACATACCCACGTTTGTTCGCTTCCTGAGTCTTTTCATTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp GCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCTGCCGATGAGTTGTGTTGAATCTCAGTaGACACAGCTCGAAAGCGGC +
Preference number: 5 (lower is better)
Translates to: ASHLSRGLPQILMRLPMSCVESQ*TQLESG
Trigger: GCCGCTTTCGAGCTGTGTCAACTGAGATTCAACACA...ACTCATCGGCAGGCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp CAGTGCACTCTCCACGTAAGAGTCTGTGGCTTCACTCCCTACAGACTGAACTGGGTTCCAGTCTCCGCGTaGAACACTGTGTTGAATCTC +
Preference number: 5 (lower is better)
Translates to: QCTLHVRVCGFTPYRLNWVPVSA*NTVLNL
Trigger: GAGATTCAACACAGTGTTCAACGCGGAGACTGGAAC...CCAGTTCAGTCTGTAGGGAGTGAAGCCACAGACTCTTACGTGGAGAGTGCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp CTGCCGATGAGTACAGGCCTGGAGCCCACAAAGCAGCTCGGAAGAGGAGGGGAATTCCTTGTGCTGCTTTaGTCACTTATCATTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LPMSTGLEPTKQLGRGGEFLVLL*SLIISP
Trigger: AGGAGAAATGATAAGTGACAAAAGCAGCACAAGGAA...TTCCCCTCCTCTTCCGAGCTGCTTTGTGGGCTCCAGGCCTGTACTCATCGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp GCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGTACAGACTCATGTCCTaGGGAACCTTCACTTGGGTA +
Preference number: 5 (lower is better)
Translates to: ALAPTDSCPWEPSLGYPVYRLMS*GTFTWV
Trigger: TACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTA...CACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp AGCAATGAAAAGACTCAGGAAGCGAACAAACGTGGGTATGTGGGCATAGACCCCGGACAGAAAGTTGACTaGGGCCTTAGGCAGGGAGGA +
Preference number: 5 (lower is better)
Translates to: SNEKTQEANKRGYVGIDPGQKVD*GLRQGG
Trigger: TCCTCCCTGCCTAAGGCCCAAGTCAACTTTCTGTCC...GGGGTCTATGCCCACATACCCACGTTTGTTCGCTTCCTGAGTCTTTTCATTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR CAA 90 bp CACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACAAGTGGATGCTTGCCTaGCTGTTTTCAACCAAGCGC +
Preference number: 5 (lower is better)
Translates to: HSQLQFVPLLLQTHVLGNKWMLA*LFSTKR
Trigger: GCGCTTGGTTGAAAACAGCAAGGCAAGCATCCACTT...GTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS CCA 90 bp CTGTGTCCTCACAGTGTACAAAGTCAGCATGGTTCCAGCTTTCTTTaGGTCTCACCTCCAGGTTTGCTTCTGGGCCTCTTGGATGGTTTG +
Preference number: 5 (lower is better)
Translates to: LCPHSVQSQHGSSFL*VSPPGLLLGLLDGL
Trigger: CAAACCATCCAAGAGGCCCAGAAGCAAACCTGGAGGTGAGACCCAAAGAAAGCTGGAACCATGCTGACTTTGTACACTGTGAGGACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337940.4
CDS-3UTR CAA 90 bp GATTTGACATTAAACCCAGGGCTACATTTCCCAAAACTAGTTCTTAGGTGTGGACAGTGTCCATCTGTCTaGGCCCGGGAGTGGCGGCTC +
Preference number: 5 (lower is better)
Translates to: DLTLNPGLHFPKLVLRCGQCPSV*AREWRL
Trigger: GAGCCGCCACTCCCGGGCCAAGACAGATGGACACTG...TCCACACCTAAGAACTAGTTTTGGGAAATGTAGCCCTGGGTTTAATGTCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp AGCAATGAAAAGACTCAGGAAGCGAACAAACGTGGGTATGTGGGCATAGACCCCACTCACAGCTGCAGTTaGTGCCCTTGCTCCTACAGA +
Preference number: 5 (lower is better)
Translates to: SNEKTQEANKRGYVGIDPTHSCS*CPCSYR
Trigger: TCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGT...GGGGTCTATGCCCACATACCCACGTTTGTTCGCTTCCTGAGTCTTTTCATTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS CCA 90 bp TTTCCAGGAACAGACTCTGTGTCCTCACAGTGTACAAAGTCAGCATaGTTCCAGCTTTCTTTGGGTCTCACCTCCAGGTTTGCTTCTGGG +
Preference number: 5 (lower is better)
Translates to: FPGTDSVSSQCTKSA*FQLSLGLTSRFASG
Trigger: CCCAGAAGCAAACCTGGAGGTGAGACCCAAAGAAAGCTGGAACCATGCTGACTTTGTACACTGTGAGGACACAGAGTCTGTTCCTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
ENST00000474090.1
CDS-3UTR CAA 90 bp TACTCACAAGTGGCTATAAACAAGGCAGGCACTTTCATACCCTTTAGCTTTGAGCTTGGGAACCTTCACTaGGGTACCCAGTGCCCGCCA +
Preference number: 5 (lower is better)
Translates to: YSQVAINKAGTFIPFSFELGNLH*GTQCPP
Trigger: TGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAG...CTCAAAGCTAAAGGGTATGAAAGTGCCTGCCTTGTTTATAGCCACTTGTGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp TCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCTTCTCTATCCAATTaGCACTTCCCAAGGGATGAG +
Preference number: 5 (lower is better)
Translates to: SHTRTHSCSLCPCSYRLMSSLSN*HFPRDE
Trigger: CTCATCCCTTGGGAAGTGCAAATTGGATAGAGAAGA...CATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS TCA 90 bp CGGAAATTCTTGAAATGGGAGAAGGTAGTGTCAAAGGTTTTCATCTaGGCGTCCATCAGCTCCCTGATCATCATCCGCTGCTCCTCTGTC +
Preference number: 5 (lower is better)
Translates to: RKFLKWEKVVSKVFI*ASISSLIIIRCSSV
Trigger: GACAGAGGAGCAGCGGATGATGATCAGGGAGCTGATGGACGCTCAGATGAAAACCTTTGACACTACCTTCTCCCATTTCAAGAATTTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
ENST00000493757.1
CDS-3UTR CAA 90 bp CACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCACACAGGGAAATTCCTaGTGCTGCTTTTGTCACTTA +
Preference number: 5 (lower is better)
Translates to: HSCSLCPCSYRLMSLGTFTQGNS*CCFCHL
Trigger: TAAGTGACAAAAGCAGCACAAGGAATTTCCCTGTGT...GAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp GCTTCTCATCTCTCTAGAGGACTCCCACAGATACTCATGCGCCTGCCGATGAGTACACAGGGAAATTCCTaGTGCTGCTTTTGTCACTTA +
Preference number: 5 (lower is better)
Translates to: ASHLSRGLPQILMRLPMSTQGNS*CCFCHL
Trigger: TAAGTGACAAAAGCAGCACAAGGAATTTCCCTGTGT...ACTCATCGGCAGGCGCATGAGTATCTGTGGGAGTCCTCTAGAGAGATGAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp TACTCACAAGTGGCTATAAACAAGGCAGGCACTTTCATACCCTTTAGCTTTGAGCCCCTGGGGTCCACTTaGAACAATCCGGTGCAAAGG +
Preference number: 5 (lower is better)
Translates to: YSQVAINKAGTFIPFSFEPLGST*NNPVQR
Trigger: CCTTTGCACCGGATTGTTCAAAGTGGACCCCAGGGG...CTCAAAGCTAAAGGGTATGAAAGTGCCTGCCTTGTTTATAGCCACTTGTGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp TACTCACAAGTGGCTATAAACAAGGCAGGCACTTTCATACCCTTTAGCTTTGAGGTCTCACCTCCAGGTTaGCTTCTGGGCCTCTTGGAC +
Preference number: 5 (lower is better)
Translates to: YSQVAINKAGTFIPFSFEVSPPG*LLGLLD
Trigger: GTCCAAGAGGCCCAGAAGCAAACCTGGAGGTGAGAC...CTCAAAGCTAAAGGGTATGAAAGTGCCTGCCTTGTTTATAGCCACTTGTGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp CCTACAGACTCATGTCCTTGGGAACCTTCACTTGGGTACCCAGTGCCCGCCATCGGATATGAGACAATCTaGTCTCTCACCTATATTTCA +
Preference number: 5 (lower is better)
Translates to: PTDSCPWEPSLGYPVPAIGYETI*SLTYIS
Trigger: TGAAATATAGGTGAGAGACAAGATTGTCTCATATCC...GATGGCGGGCACTGGGTACCCAAGTGAAGGTTCCCAAGGACATGAGTCTGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS TCA 90 bp TTCCCAAGGGATGAGAAAGACTTGAGGCTGGGATTTCCTAGGGGTTaGCATTTCTCAAGTGGATGCTTGCCTTGCTGTTTTCAACCAAGC +
Preference number: 5 (lower is better)
Translates to: FPRDEKDLRLGFPRG*HFSSGCLPCCFQPS
Trigger: GCTTGGTTGAAAACAGCAAGGCAAGCATCCACTTGAGAAATGTCAACCCCTAGGAAATCCCAGCCTCAAGTCTTTCTCATCCCTTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS GCA 90 bp CCGGTGCAAAGGATCGATCAAGGAGTAGCTTTACCAAGGAGCCGCTaGCTTGTTCAGGACAGGAGTATTAGCTTATTCTCTTGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: PVQRIDQGVALPRSR*LVQDRSISLFSCFS
Trigger: AGAAAAGCAAGAGAATAAGCTAATACTCCTGTCCTGAACAAGGCAGCGGCTCCTTGGTAAAGCTACTCCTTGATCGATCCTTTGCACCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393716.8
ENST00000466380.6
ENST00000474090.1
CDS-3UTR CAA 90 bp TACTCACAAGTGGCTATAAACAAGGCAGGCACTTTCATACCCTTTAGCTTTGAGCAGAGTAATGGCGAATaGCTCCTGCAGCTGGTCCAC +
Preference number: 5 (lower is better)
Translates to: YSQVAINKAGTFIPFSFEQSNGE*LLQLVH
Trigger: GTGGACCAGCTGCAGGAGCAATTCGCCATTACTCTG...CTCAAAGCTAAAGGGTATGAAAGTGCCTGCCTTGTTTATAGCCACTTGTGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp TCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTTCCTTGTGCTGCTTTaGTCACTTATCATTTCTCCT +
Preference number: 5 (lower is better)
Translates to: SHTRTHSCSLCPCSYRLMFLVLL*SLIISP
Trigger: AGGAGAAATGATAAGTGACAAAAGCAGCACAAGGAA...CATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp GATTTGACATTAAACCCAGGGCTACATTTCCCAAAACTAGTTCTTAGGTGTGGACAGAGTAATGGCGAATaGCTCCTGCAGCTGGTCCAC +
Preference number: 5 (lower is better)
Translates to: DLTLNPGLHFPKLVLRCGQSNGE*LLQLVH
Trigger: GTGGACCAGCTGCAGGAGCAATTCGCCATTACTCTG...TCCACACCTAAGAACTAGTTTTGGGAAATGTAGCCCTGGGTTTAATGTCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp CACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGTCCTTGGGAACCTTCTCATACCCTTTAGCTTaGAGAATAGATGTGTACACA +
Preference number: 5 (lower is better)
Translates to: HSCSLCPCSYRLMSLGTFSYPLA*RIDVYT
Trigger: TGTGTACACATCTATTCTCAAAGCTAAAGGGTATGA...GAAGGTTCCCAAGGACATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp CAGTGCACTCTCCACGTAAGAGTCTGTGGCTTCACTCCCTACAGACTGAACTGGTCATACCCTTTAGCTTaGAGAATAGATGTGTACACA +
Preference number: 5 (lower is better)
Translates to: QCTLHVRVCGFTPYRLNWSYPLA*RIDVYT
Trigger: TGTGTACACATCTATTCTCAAAGCTAAAGGGTATGA...CCAGTTCAGTCTGTAGGGAGTGAAGCCACAGACTCTTACGTGGAGAGTGCACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp TACTCACAAGTGGCTATAAACAAGGCAGGCACTTTCATACCCTTTAGCTTTGAGCAAGGAGCCGCTGCCTaGTTCAGGACAGGAGTATTA +
Preference number: 5 (lower is better)
Translates to: YSQVAINKAGTFIPFSFEQGAAA*FRTGVL
Trigger: TAATACTCCTGTCCTGAACAAGGCAGCGGCTCCTTG...CTCAAAGCTAAAGGGTATGAAAGTGCCTGCCTTGTTTATAGCCACTTGTGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp CACCAAATCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGAAAGTGAGCAAAGTATaGATTTATGACGGTGCCAAT +
Preference number: 5 (lower is better)
Translates to: HQITHTHSQLQFVPLLLQKVSKV*IYDGAN
Trigger: ATTGGCACCGTCATAAATCAATACTTTGCTCACTTT...CTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGATTTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR CAA 90 bp TCACACACACGCACTCACAGCTGCAGTTTGTGCCCTTGCTCCTACAGACTCATGAAGAGATTACCGTATTaGTTCTCATTATGTTCTCCC +
Preference number: 5 (lower is better)
Translates to: SHTRTHSCSLCPCSYRLMKRLPY*FSLCSP
Trigger: GGGAGAACATAATGAGAACAAATACGGTAATCTCTT...CATGAGTCTGTAGGAGCAAGGGCACAAACTGCAGCTGTGAGTGCGTGTGTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS-3UTR CAA 90 bp TACTCACAAGTGGCTATAAACAAGGCAGGCACTTTCATACCCTTTAGCTTTGAGTGGTTCCAGCTTTCTTaGGGTCTCACCTCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: YSQVAINKAGTFIPFSFEWFQLS*GLTSRF
Trigger: AAACCTGGAGGTGAGACCCAAAGAAAGCTGGAACCA...CTCAAAGCTAAAGGGTATGAAAGTGCCTGCCTTGTTTATAGCCACTTGTGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp TACTCACAAGTGGCTATAAACAAGGCAGGCACTTTCATACCCTTTAGCTTTGAGTGTGTTGAATCTCAGTaGACACAGCTCGAAAGCGGC +
Preference number: 5 (lower is better)
Translates to: YSQVAINKAGTFIPFSFECVESQ*TQLESG
Trigger: GCCGCTTTCGAGCTGTGTCAACTGAGATTCAACACA...CTCAAAGCTAAAGGGTATGAAAGTGCCTGCCTTGTTTATAGCCACTTGTGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
CDS-3UTR CAA 90 bp AGCAATGAAAAGACTCAGGAAGCGAACAAACGTGGGTATGTGGGCATAGACCCCAGGGGCAACATTAATTaGAACCTAGATCTCCTTATA +
Preference number: 5 (lower is better)
Translates to: SNEKTQEANKRGYVGIDPRGNIN*NLDLLI
Trigger: TATAAGGAGATCTAGGTTCAAATTAATGTTGCCCCT...GGGGTCTATGCCCACATACCCACGTTTGTTCGCTTCCTGAGTCTTTTCATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS TCA 72 bp GGCGGCAGGCCTGGCACTGTCGCCGGGTCTTCCGGGTaGTCTCGCAGGCGCCCTTCCGGAAGGGGCACCTCA +
Preference number: 6 (lower is better)
Translates to: GGRPGTVAGSSG*SRRRPSGRGTS
Trigger: TGAGGTGCCCCTTCCGGAAGGGCGCCTGCGAGATCACCCGGAAGACCCGGCGACAGTGCCAGGCCTGCCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
ENST00000474090.1
CDS GCA 72 bp GCGAATTGCTCCTGCAGCTGGTCCACCACGCGGTGCTaGAGCACACCTGGGCGGTCTGGGGAGAAGAGGGAG +
Preference number: 6 (lower is better)
Translates to: ANCSCSWSTTRC*STPGRSGEKRE
Trigger: CTCCCTCTTCTCCCCAGACCGCCCAGGTGTGCTGCAGCACCGCGTGGTGGACCAGCTGCAGGAGCAATTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
ENST00000493757.1
CDS GCA 72 bp CCGCCTCTCCTCCACGGCCTCGTCGGACATGATCACTaGAGGGACAGTGAGGCTGGCTCAGGCACACGTGCC +
Preference number: 6 (lower is better)
Translates to: PPLLHGLVGHDH*RDSEAGSGTRA
Trigger: GGCACGTGTGCCTGAGCCAGCCTCACTGTCCCTGCAGTGATCATGTCCGACGAGGCCGTGGAGGAGAGGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493757.1
CDS GCA 72 bp ATGGCGAATTGCTCCTGCAGCTGGTCCACCACGCGGTaGTGCAGCACACCTGGGCGGTCTGGGGAGAAGAGG +
Preference number: 6 (lower is better)
Translates to: MANCSCSWSTTR*CSTPGRSGEKR
Trigger: CCTCTTCTCCCCAGACCGCCCAGGTGTGCTGCAGCACCGCGTGGTGGACCAGCTGCAGGAGCAATTCGCCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
ENST00000493757.1
CDS CAA 72 bp GGGCCGACTGCAAGCGCTCCCCCAGGTGGCTGCCTGTaGCACACGGACACCAGCTCACATGTGCACGTGTGT +
Preference number: 6 (lower is better)
Translates to: GPTASAPPGGCL*HTDTSSHVHVC
Trigger: ACACACGTGCACATGTGAGCTGGTGTCCGTGTGCAACAGGCAGCCACCTGGGGGAGCGCTTGCAGTCGGCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474090.1
CDS CAA 90 bp TCTCCCAGAGGGCCGACTGCAAGCGCTCCCCCAGGTGGCTGCCTGTaGCACACGGACACCAGCTCACATGTGCACGTGTGTTCACGCGCA +
Preference number: 6 (lower is better)
Translates to: SPRGPTASAPPGGCL*HTDTSSHVHVCSRA
Trigger: TGCGCGTGAACACACGTGCACATGTGAGCTGGTGTCCGTGTGCAACAGGCAGCCACCTGGGGGAGCGCTTGCAGTCGGCCCTCTGGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474090.1
CDS GCA 72 bp TCACGCGCACACTCGGCGCGCATCTCCACACAAGCATaGCCACACCCACGGCACGTCCTTACTCAGAGCCGT +
Preference number: 6 (lower is better)
Translates to: SRAHSARISTQA*PHPRHVLTQSR
Trigger: ACGGCTCTGAGTAAGGACGTGCCGTGGGTGTGGGCATGCTTGTGTGGAGATGCGCGCCGAGTGTGCGCGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474090.1
CDS GCA 72 bp GGCCGACTGCAAGCGCTCCCCCAGGTGGCTGCCTGTTaGACACGGACACCAGCTCACATGTGCACGTGTGTT +
Preference number: 6 (lower is better)
Translates to: GRLQALPQVAAC*TRTPAHMCTCV
Trigger: AACACACGTGCACATGTGAGCTGGTGTCCGTGTGCAACAGGCAGCCACCTGGGGGAGCGCTTGCAGTCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474090.1
CDS CCA 72 bp GGCAGCTTCTTCCCTCGATGGGGCCTGCAGAGACTCTaGCAACTCGCAGCCACTGCTAAGCACCCCTGGCAG +
Preference number: 6 (lower is better)
Translates to: GSFFPRWGLQRL*QLAATAKHPWQ
Trigger: CTGCCAGGGGTGCTTAGCAGTGGCTGCGAGTTGCCAGAGTCTCTGCAGGCCCCATCGAGGGAAGAAGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000493757.1
CDS CAA 72 bp CAGGCGCCCTTCCGGAAGGGGCACCTCAGCCGGGCGTaGCGTTTCATGGCCCTCCTGAAAAAGCCCTTGCAT +
Preference number: 6 (lower is better)
Translates to: QAPFRKGHLSRA*RFMALLKKPLH
Trigger: ATGCAAGGGCTTTTTCAGGAGGGCCATGAAACGCAACGCCCGGCTGAGGTGCCCCTTCCGGAAGGGCGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
ENST00000474090.1
CDS TCA 72 bp TGTATGTCCTGGATGCGCAGCAGCCGCTGGGTGTGCTaGGCATTGATGCTGCGGAGCTCGGTGAGCATAGCC +
Preference number: 6 (lower is better)
Translates to: CMSWMRSSRWVC*ALMLRSSVSIA
Trigger: GGCTATGCTCACCGAGCTCCGCAGCATCAATGCTCAGCACACCCAGCGGCTGCTGCGCATCCAGGACATACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
ENST00000493757.1
CDS GCA 72 bp CAACTCAGCCGCAGCACTGTGCAGGGGTATGGCAGGTaGTCTGAGGGACCCCTCCTTGAAGTGGTGAGTCCT +
Preference number: 6 (lower is better)
Translates to: QLSRSTVQGYGR*SEGPLLEVVSP
Trigger: AGGACTCACCACTTCAAGGAGGGGTCCCTCAGAGCACCTGCCATACCCCTGCACAGTGCTGCGGCTGAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337940.4
CDS GCA 72 bp CTTGGATGGTTTGAAGCCAACTCAGCCGCAGCACTGTaGAGGGGTATGGCAGGTGCTCTGAGGGACCCCTCC +
Preference number: 6 (lower is better)
Translates to: LGWFEANSAAAL*RGMAGALRDPS
Trigger: GGAGGGGTCCCTCAGAGCACCTGCCATACCCCTGCACAGTGCTGCGGCTGAGTTGGCTTCAAACCATCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337940.4
CDS GCA 72 bp TGGCTCCACTTGGCAGCTTCTTCCCTCGATGGGGCCTaGAGAGACTCTGGCAACTCGCAGCCACTGCTAAGC +
Preference number: 6 (lower is better)
Translates to: WLHLAASSLDGA*RDSGNSQPLLS
Trigger: GCTTAGCAGTGGCTGCGAGTTGCCAGAGTCTCTGCAGGCCCCATCGAGGGAAGAAGCTGCCAAGTGGAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000493757.1
CDS GCA 72 bp GCAGCCGCTCAGCTACCTGTGATGCCGAACAACTCCTaGATGAGGGGCGTAGCAAAGGGGTGTATGTCCTGG +
Preference number: 6 (lower is better)
Translates to: AAAQLPVMPNNS*MRGVAKGCMSW
Trigger: CCAGGACATACACCCCTTTGCTACGCCCCTCATGCAGGAGTTGTTCGGCATCACAGGTAGCTGAGCGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
ENST00000493757.1
CDS CCA 72 bp CAGCAGGGAGAAGATCTCTTTCCCGCCACTGTCGGCTaGGGGTTTGTAGTTCCAGACACTGCCATCCTCCCC +
Preference number: 6 (lower is better)
Translates to: QQGEDLFPATVG*GFVVPDTAILP
Trigger: GGGGAGGATGGCAGTGTCTGGAACTACAAACCCCCAGCCGACAGTGGCGGGAAAGAGATCTTCTCCCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
ENST00000493757.1
CDS CAA 90 bp CTGGGGCCGATTGCATTCAATGTAGGACTTCAGAGTAATGGCGAATaGCTCCTGCAGCTGGTCCACCACGCGGTGCTGCAGCACACCTGG +
Preference number: 6 (lower is better)
Translates to: LGPIAFNVGLQSNGE*LLQLVHHAVLQHTW
Trigger: CCAGGTGTGCTGCAGCACCGCGTGGTGGACCAGCTGCAGGAGCAATTCGCCATTACTCTGAAGTCCTACATTGAATGCAATCGGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
ENST00000493757.1
CDS CCA 72 bp TTACACAGCTCACTGCTGGGGACTTACTGCCAGCAGTaGGGACTGGGACCCACAGCCATAGAGCTCTGTCCT +
Preference number: 6 (lower is better)
Translates to: LHSSLLGTYCQQ*GLGPTAIELCP
Trigger: AGGACAGAGCTCTATGGCTGTGGGTCCCAGTCCCCACTGCTGGCAGTAAGTCCCCAGCAGTGAGCTGTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS CAA 90 bp AGAGAGACCTTCAAAGAGCACAGATCTTTCCGGACCTGGCTCCACTaGGCAGCTTCTTCCCTCGATGGGGCCTGCAGAGACTCTGGCAAC +
Preference number: 6 (lower is better)
Translates to: RETFKEHRSFRTWLH*AASSLDGACRDSGN
Trigger: GTTGCCAGAGTCTCTGCAGGCCCCATCGAGGGAAGAAGCTGCCAAGTGGAGCCAGGTCCGGAAAGATCTGTGCTCTTTGAAGGTCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000493757.1
CDS TCA 72 bp CCAGTCTCCGCGTTGAACACTGTGTTGAATCTCAGTTaGCACAGCTCGAAAGCGGCCCCCTTCAGCAGGGAG +
Preference number: 6 (lower is better)
Translates to: PVSALNTVLNLS*HSSKAAPFSRE
Trigger: CTCCCTGCTGAAGGGGGCCGCTTTCGAGCTGTGTCAACTGAGATTCAACACAGTGTTCAACGCGGAGACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
ENST00000493757.1
CDS TCA 72 bp GGCTCTTTCCTCTCCCGGGTCCTGCCAGAGGGGAGCTaGAGAGTCCTCACTCTTCAGCCTCAACCTTCTTAT +
Preference number: 6 (lower is better)
Translates to: GSFLSRVLPEGS*RVLTLQPQPSY
Trigger: ATAAGAAGGTTGAGGCTGAAGAGTGAGGACTCTTCAGCTCCCCTCTGGCAGGACCCGGGAGAGGAAAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS CCA 72 bp AGAGAGACCTTCAAAGAGCACAGATCTTTCCGGACCTaGCTCCACTTGGCAGCTTCTTCCCTCGATGGGGCC +
Preference number: 6 (lower is better)
Translates to: RETFKEHRSFRT*LHLAASSLDGA
Trigger: GGCCCCATCGAGGGAAGAAGCTGCCAAGTGGAGCCAGGTCCGGAAAGATCTGTGCTCTTTGAAGGTCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000493757.1
CDS CAA 72 bp CGGCAGATTTGGGGACCTCCGACTTCCTCATCTGCGTaGACACTGGGCTTTCCAGGAACAGACTCTGTGTCC +
Preference number: 6 (lower is better)
Translates to: RQIWGPPTSSSA*TLGFPGTDSVS
Trigger: GGACACAGAGTCTGTTCCTGGAAAGCCCAGTGTCAACGCAGATGAGGAAGTCGGAGGTCCCCAAATCTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
ENST00000474090.1
CDS CAA 72 bp TTCAAAGAGCACAGATCTTTCCGGACCTGGCTCCACTaGGCAGCTTCTTCCCTCGATGGGGCCTGCAGAGAC +
Preference number: 6 (lower is better)
Translates to: FKEHRSFRTWLH*AASSLDGACRD
Trigger: GTCTCTGCAGGCCCCATCGAGGGAAGAAGCTGCCAAGTGGAGCCAGGTCCGGAAAGATCTGTGCTCTTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000493757.1
CDS CAA 90 bp CCACATACACGGCAGATTTGGGGACCTCCGACTTCCTCATCTGCGTaGACACTGGGCTTTCCAGGAACAGACTCTGTGTCCTCACAGTGT +
Preference number: 6 (lower is better)
Translates to: PHTRQIWGPPTSSSA*TLGFPGTDSVSSQC
Trigger: ACACTGTGAGGACACAGAGTCTGTTCCTGGAAAGCCCAGTGTCAACGCAGATGAGGAAGTCGGAGGTCCCCAAATCTGCCGTGTATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
ENST00000474090.1
CDS TCA 72 bp TGTCAAAGGTTTTCATCTGAGCGTCCATCAGCTCCCTaGTCATCATCCGCTGCTCCTCTGTCAGCCCCTGCA +
Preference number: 6 (lower is better)
Translates to: CQRFSSERPSAP*SSSAAPLSAPA
Trigger: TGCAGGGGCTGACAGAGGAGCAGCGGATGATGATCAGGGAGCTGATGGACGCTCAGATGAAAACCTTTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
ENST00000493757.1
CDS TCA 72 bp CTCCTTAACCTCTCCTGCCTCCAGGTTTCTCCTTTGTaGTCCGGAGAAACCGTGTTTACCTCGCACCGCTGT +
Preference number: 6 (lower is better)
Translates to: LLNLSCLQVSPL*SGETVFTSHRC
Trigger: ACAGCGGTGCGAGGTAAACACGGTTTCTCCGGATCACAAAGGAGAAACCTGGAGGCAGGAGAGGTTAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493757.1
CDS TCA 72 bp GCACGGGCTTCAGAATCCAAAGGCGCTGGGTTTGCATaGAAGCTTTGCCACTTACTACCTGTGACCCCAAGC +
Preference number: 6 (lower is better)
Translates to: ARASESKGAGFA*KLCHLLPVTPS
Trigger: GCTTGGGGTCACAGGTAGTAAGTGGCAAAGCTTTCATGCAAACCCAGCGCCTTTGGATTCTGAAGCCCGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493757.1
CDS GCA 72 bp AAGAGCACGGGCTTCAGAATCCAAAGGCGCTGGGTTTaGATGAAAGCTTTGCCACTTACTACCTGTGACCCC +
Preference number: 6 (lower is better)
Translates to: KSTGFRIQRRWV*MKALPLTTCDP
Trigger: GGGGTCACAGGTAGTAAGTGGCAAAGCTTTCATGCAAACCCAGCGCCTTTGGATTCTGAAGCCCGTGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493757.1
CDS CCA 72 bp GCTGCAGCTTCTTCAGCATGTAGTGGAATTTCAGCATaGGCTCCAGTAGAAGTTGCTGGAAGCCACCTGCAG +
Preference number: 6 (lower is better)
Translates to: AAASSACSGISA*APVEVAGSHLQ
Trigger: CTGCAGGTGGCTTCCAGCAACTTCTACTGGAGCCCATGCTGAAATTCCACTACATGCTGAAGAAGCTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
ENST00000493757.1
CDS CCA 72 bp CCTGGCAAGAGCACGGGCTTCAGAATCCAAAGGCGCTaGGTTTGCATGAAAGCTTTGCCACTTACTACCTGT +
Preference number: 6 (lower is better)
Translates to: PGKSTGFRIQRR*VCMKALPLTTC
Trigger: ACAGGTAGTAAGTGGCAAAGCTTTCATGCAAACCCAGCGCCTTTGGATTCTGAAGCCCGTGCTCTTGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493757.1
CDS CAA 72 bp ATTGCATTCAATGTAGGACTTCAGAGTAATGGCGAATaGCTCCTGCAGCTGGTCCACCACGCGGTGCTGCAG +
Preference number: 6 (lower is better)
Translates to: IAFNVGLQSNGE*LLQLVHHAVLQ
Trigger: CTGCAGCACCGCGTGGTGGACCAGCTGCAGGAGCAATTCGCCATTACTCTGAAGTCCTACATTGAATGCAAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
ENST00000493757.1
CDS CAA 90 bp TCTGTGTCCTCACAGTGTACAAAGTCAGCATGGTTCCAGCTTTCTTaGGGTCTCACCTCCAGGTTTGCTTCTGGGCCTCTTGGACTGCTT +
Preference number: 6 (lower is better)
Translates to: SVSSQCTKSAWFQLS*GLTSRFASGPLGLL
Trigger: AAGCAGTCCAAGAGGCCCAGAAGCAAACCTGGAGGTGAGACCCAAAGAAAGCTGGAACCATGCTGACTTTGTACACTGTGAGGACACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393716.8
ENST00000466380.6
ENST00000474090.1
CDS CCA 72 bp CACAGTGTACAAAGTCAGCATGGTTCCAGCTTTCTTTaGGTCTCACCTCCAGGTTTGCTTCTGGGCCTCTTG +
Preference number: 6 (lower is better)
Translates to: HSVQSQHGSSFL*VSPPGLLLGLL
Trigger: CAAGAGGCCCAGAAGCAAACCTGGAGGTGAGACCCAAAGAAAGCTGGAACCATGCTGACTTTGTACACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
ENST00000474090.1
CDS CAA 72 bp CATGGTTCCAGCTTTCTTTGGGTCTCACCTCCAGGTTaGCTTCTGGGCCTCTTGGATGGTTTGAAGCCAACT +
Preference number: 6 (lower is better)
Translates to: HGSSFLWVSPPG*LLGLLDGLKPT
Trigger: AGTTGGCTTCAAACCATCCAAGAGGCCCAGAAGCAAACCTGGAGGTGAGACCCAAAGAAAGCTGGAACCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337940.4
CDS CAA 90 bp TCTGTGTCCTCACAGTGTACAAAGTCAGCATGGTTCCAGCTTTCTTaGGGTCTCACCTCCAGGTTTGCTTCTGGGCCTCTTGGATGGTTT +
Preference number: 6 (lower is better)
Translates to: SVSSQCTKSAWFQLS*GLTSRFASGPLGWF
Trigger: AAACCATCCAAGAGGCCCAGAAGCAAACCTGGAGGTGAGACCCAAAGAAAGCTGGAACCATGCTGACTTTGTACACTGTGAGGACACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337940.4
CDS CAA 90 bp CTTGGTGGTAAGTTCTTTGCTCCGACTTCTCCCCTGGGGTCCACTTaGAACAATCCGGTGCAAAGGATCGATCAAGGAGTAGCTTTACCA +
Preference number: 6 (lower is better)
Translates to: LGGKFFAPTSPLGST*NNPVQRIDQGVALP
Trigger: TGGTAAAGCTACTCCTTGATCGATCCTTTGCACCGGATTGTTCAAAGTGGACCCCAGGGGAGAAGTCGGAGCAAAGAACTTACCACCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393716.8
ENST00000466380.6
ENST00000474090.1
CDS CAA 72 bp TCACAGTGTACAAAGTCAGCATGGTTCCAGCTTTCTTaGGGTCTCACCTCCAGGTTTGCTTCTGGGCCTCTT +
Preference number: 6 (lower is better)
Translates to: SQCTKSAWFQLS*GLTSRFASGPL
Trigger: AAGAGGCCCAGAAGCAAACCTGGAGGTGAGACCCAAAGAAAGCTGGAACCATGCTGACTTTGTACACTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
ENST00000474090.1
CDS CAA 72 bp AAGTTCTTTGCTCCGACTTCTCCCCTGGGGTCCACTTaGAACAATCCGGTGCAAAGGATCGATCAAGGAGTA +
Preference number: 6 (lower is better)
Translates to: KFFAPTSPLGST*NNPVQRIDQGV
Trigger: TACTCCTTGATCGATCCTTTGCACCGGATTGTTCAAAGTGGACCCCAGGGGAGAAGTCGGAGCAAAGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393716.8
ENST00000466380.6
ENST00000474090.1
CDS TCA 72 bp TTGAAATGGGAGAAGGTAGTGTCAAAGGTTTTCATCTaGGCGTCCATCAGCTCCCTGATCATCATCCGCTGC +
Preference number: 6 (lower is better)
Translates to: LKWEKVVSKVFI*ASISSLIIIRC
Trigger: GCAGCGGATGATGATCAGGGAGCTGATGGACGCTCAGATGAAAACCTTTGACACTACCTTCTCCCATTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337940.4
ENST00000393716.8
ENST00000466380.6
ENST00000493757.1
CDS GCA 72 bp AGATGCTTTATGGCAGGTGAGGGGAGTGGAAGTAACTaGTCCTACCTAAAAGGCAAACAAGTACAAGCCTCT +
Preference number: 6 (lower is better)
Translates to: RCFMAGEGSGSN*SYLKGKQVQAS
Trigger: AGAGGCTTGTACTTGTTTGCCTTTTAGGTAGGAGCAGTTACTTCCACTCCCCTCACCTGCCATAAAGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS TCA 72 bp GATGAGAAAGACTTGAGGCTGGGATTTCCTAGGGGTTaGCATTTCTCAAGTGGATGCTTGCCTTGCTGTTTT +
Preference number: 6 (lower is better)
Translates to: DEKDLRLGFPRG*HFSSGCLPCCF
Trigger: AAAACAGCAAGGCAAGCATCCACTTGAGAAATGTCAACCCCTAGGAAATCCCAGCCTCAAGTCTTTCTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS GCA 72 bp GATTTCCTAGGGGTTGACATTTCTCAAGTGGATGCTTaGCTTGCTGTTTTCAACCAAGCGCAGAATGTAAGG +
Preference number: 6 (lower is better)
Translates to: DFLGVDISQVDA*LAVFNQAQNVR
Trigger: CCTTACATTCTGCGCTTGGTTGAAAACAGCAAGGCAAGCATCCACTTGAGAAATGTCAACCCCTAGGAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS CAA 72 bp TATTGGATTACAAATCCCACTGGACAGAAAGTTGACTaGGGCCTTAGGCAGGGAGGACCTAGAGTAAGTGAA +
Preference number: 6 (lower is better)
Translates to: YWITNPTGQKVD*GLRQGGPRVSE
Trigger: TTCACTTACTCTAGGTCCTCCCTGCCTAAGGCCCAAGTCAACTTTCTGTCCAGTGGGATTTGTAATCCAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS CAA 90 bp CCACCTCCCTGGATAGTGTTACTTGATGTGAAAGTGAGCAAAGTATaGATTTATGACGGTGCCAATCACCAGCATGGTTATGTAAGAGGG +
Preference number: 6 (lower is better)
Translates to: PPPWIVLLDVKVSKV*IYDGANHQHGYVRG
Trigger: CCCTCTTACATAACCATGCTGGTGATTGGCACCGTCATAAATCAATACTTTGCTCACTTTCACATCAAGTAACACTATCCAGGGAGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS TCA 72 bp TATCCAATTTGCACTTCCCAAGGGATGAGAAAGACTTaGGGCTGGGATTTCCTAGGGGTTGACATTTCTCAA +
Preference number: 6 (lower is better)
Translates to: YPICTSQGMRKT*GWDFLGVDISQ
Trigger: TTGAGAAATGTCAACCCCTAGGAAATCCCAGCCTCAAGTCTTTCTCATCCCTTGGGAAGTGCAAATTGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS CAA 90 bp AGGGGCAACATTAATTTGAACCTAGATCTCCTTATACTTCCTCCTTaGTTGAAACCACCTCCCTGGATAGTGTTACTTGATGTGAAAGTG +
Preference number: 6 (lower is better)
Translates to: RGNINLNLDLLILPP*LKPPPWIVLLDVKV
Trigger: CACTTTCACATCAAGTAACACTATCCAGGGAGGTGGTTTCAACAAAGGAGGAAGTATAAGGAGATCTAGGTTCAAATTAATGTTGCCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466380.6
CDS CAA 72 bp TGGATAGTGTTACTTGATGTGAAAGTGAGCAAAGTATaGATTTATGACGGTGCCAATCACCAGCATGGTTAT +
Preference number: 6 (lower is better)
Translates to: WIVLLDVKVSKV*IYDGANHQHGY
Trigger: ATAACCATGCTGGTGATTGGCACCGTCATAAATCAATACTTTGCTCACTTTCACATCAAGTAACACTATCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466380.6