RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NR1H3 (Homo sapiens)

Ensembl gene IDs: ENSG00000025434

Ensembl transcript IDs: ENST00000395397.7, ENST00000405576.5, ENST00000405853.7, ENST00000407404.5, ENST00000412937.5, ENST00000419652.5, ENST00000420369.5, ENST00000436029.5, ENST00000436778.5, ENST00000437276.1, ENST00000441012.7, ENST00000444396.5, ENST00000449369.5, ENST00000457932.5, ENST00000461778.5, ENST00000462051.5, ENST00000467728.5, ENST00000473222.1, ENST00000476086.6, ENST00000481020.5, ENST00000481889.6, ENST00000483882.1, ENST00000486991.1, ENST00000487913.5, ENST00000494018.1, ENST00000495866.5, ENST00000498548.1, ENST00000525441.5, ENST00000527464.5, ENST00000527949.1, ENST00000529540.5, ENST00000530310.1, ENST00000531660.5, ENST00000532630.1, ENST00000616973.4

Found 644 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCATGCCAGCCTGACGGCATTTGCGAAGCCGACACTCCTGGCACTTaGGACGCATGTAGGTGTCCATGGGGCAGTGGCCGCCACTGTGGC +
Preference number: 1 (lower is better)
Translates to: ACQPDGICEADTPGT*DACRCPWGSGRHCG
Trigger: GCCACAGTGGCGGCCACTGCCCCATGGACACCTACATGCGTCGCAAGTGCCAGGAGTGTCGGCTTCGCAAATGCCGTCAGGCTGGCATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420369.5
3UTR GCA 90 bp TTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTaGCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCC +
Preference number: 1 (lower is better)
Translates to: FNATGGSPCPAPRNV*PSQSVPLLGGSHQA
Trigger: GGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
3UTR-3UTR TCA 90 bp GCCTGTTCCTCCTCTTGCCGCTTCAGTTTCTTCAGGCGGATCTGTTCTTCTGACTCCCGCATGCCAGCCTaGCGGCATTTGCGAAGCCGA +
Preference number: 2 (lower is better)
Translates to: ACSSSCRFSFFRRICSSDSRMPA*RHLRSR
Trigger: TCGGCTTCGCAAATGCCGTCAGGCTGGCATGCGGGA...GTCAGAAGAACAGATCCGCCTGAAGAAACTGAAGCGGCAAGAGGAGGAACAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420369.5
3UTR-3UTR CCA 90 bp TCCTCCTCTTGCCGCTTCAGTTTCTTCAGGCGGATCTGTTCTTCTGACAGGACAGCATGTAGGTGTCCATaGGGCAGTGGCCGCCACTGT +
Preference number: 2 (lower is better)
Translates to: SSSCRFSFFRRICSSDRTACRCP*GSGRHC
Trigger: ACAGTGGCGGCCACTGCCCCATGGACACCTACATGC...TGTCCTGTCAGAAGAACAGATCCGCCTGAAGAAACTGAAGCGGCAAGAGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420369.5
3UTR-3UTR GCA 90 bp AGCATGATCTTCAGACACAGCACAGTGTTAGCGAGGGCTCCACTGCTCAGTAGCACGGGAGGATCTCCTTaGCCAGCTCCCAGGAATGTT +
Preference number: 2 (lower is better)
Translates to: SMIFRHSTVLARAPLLSSTGGSP*PAPRNV
Trigger: AACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGT...GCTACTGAGCAGTGGAGCCCTCGCTAACACTGTGCTGTGTCTGAAGATCATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
3UTR-3UTR GCA 90 bp CCCAGGCCCATCCGTTTGTGGGGTCAGCATGATCTTCAGACACAGCACAGTGTTGCTCCCAGGAATGTTTaGCCTTCTCAGTCTGTTCCA +
Preference number: 2 (lower is better)
Translates to: PRPIRLWGQHDLQTQHSVAPRNV*PSQSVP
Trigger: TGGAACAGACTGAGAAGGGCAAACATTCCTGGGAGC...AACACTGTGCTGTGTCTGAAGATCATGCTGACCCCACAAACGGATGGGCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
3UTR GCA 72 bp CCTGACGGCATTTGCGAAGCCGACACTCCTGGCACTTaGGACGCATGTAGGTGTCCATGGGGCAGTGGCCGC +
Preference number: 3 (lower is better)
Translates to: PDGICEADTPGT*DACRCPWGSGR
Trigger: GCGGCCACTGCCCCATGGACACCTACATGCGTCGCAAGTGCCAGGAGTGTCGGCTTCGCAAATGCCGTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420369.5
3UTR TCA 72 bp TCTTCTGACAGGACACACTCCTCCCGCATGCCAGCCTaGCGGCATTTGCGAAGCCGACACTCCTGGCACTTG +
Preference number: 3 (lower is better)
Translates to: SSDRTHSSRMPA*RHLRSRHSWHL
Trigger: CAAGTGCCAGGAGTGTCGGCTTCGCAAATGCCGTCAGGCTGGCATGCGGGAGGAGTGTGTCCTGTCAGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420369.5
3UTR GCA 72 bp ACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTaGCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGC +
Preference number: 3 (lower is better)
Translates to: TGGSPCPAPRNV*PSQSVPLLGGS
Trigger: GCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
3UTR TCA 72 bp CTCCACTGCTCAGTAGCCACAAAACTCGCAACCCTTTaGCTCTCTTTTAATGCCACGGGAGGATCTCCTTGC +
Preference number: 3 (lower is better)
Translates to: LHCSVATKLATL*LSFNATGGSPC
Trigger: GCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTCAAAGGGTTGCGAGTTTTGTGGCTACTGAGCAGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR CCA 90 bp TCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAGGCAAGCGGTCCGGCTaGAGCCGGGCGGCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SQSVPLLGGSHQASAIRPGKRSG*SRAALL
Trigger: GAGGAGAGCCGCCCGGCTCCAGCCGGACCGCTTGCC...TGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616973.4
CDS-3UTR GCA 90 bp CAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGACAGGGCTGTGGGCTCTaGAGCCTCCAGCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: QSVPLLGGSHQASAIRPRQGCGL*SLQPHP
Trigger: GGGGTGGGGCTGGAGGCTGCAGAGCCCACAGCCCTG...TCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp TCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCACAGGGCTGTGGGCTCTaGAGCCTCCAGCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: SQSVPLLGGSHQASAIRPQGCGL*SLQPHP
Trigger: GGGGTGGGGCTGGAGGCTGCAGAGCCCACAGCCCTG...TGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp GTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGCAGGGCTGTGGGCTCTaGAGCCTCCAGCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: VPLLGGSHQASAIRPRKQQGCGL*SLQPHP
Trigger: GGGGTGGGGCTGGAGGCTGCAGAGCCCACAGCCCTG...CTGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp CCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGGCGGCTGCTTGCAGGTaGCACCCAGCGGGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PSQSVPLLGGSHQASAIRAAACR*HPAGSS
Trigger: GCTGGAACCCGCTGGGTGGCACCTGCAAGCAGCCGC...CCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616973.4
CDS-3UTR CCA 90 bp CAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGACGGGCCTCCCGGCTATaGGGATCTGGTGCCATGGGC +
Preference number: 4 (lower is better)
Translates to: QSVPLLGGSHQASAIRPRRASRL*GSGAMG
Trigger: GCCCATGGCACCAGATCCCCATAGCCGGGAGGCCCG...TCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395397.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp TCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCACGGGCCTCCCGGCTATaGGGATCTGGTGCCATGGGC +
Preference number: 4 (lower is better)
Translates to: SQSVPLLGGSHQASAIRPRASRL*GSGAMG
Trigger: GCCCATGGCACCAGATCCCCATAGCCGGGAGGCCCG...TGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395397.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp GTAGGTGTCCATGGGGCAGTGGCCGCCACTGTGGCAGATGTAGTGCGCTCCCTTCTGGGCCTGGCTGCTTaGATCCTGTGCGCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: VGVHGAVAATVADVVRSLLGLAA*ILCAWL
Trigger: AAGCCAGGCGCACAGGATGCAAGCAGCCAGGCCCAG...AAGGGAGCGCACTACATCTGCCACAGTGGCGGCCACTGCCCCATGGACACCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420369.5
CDS-3UTR GCA 90 bp CGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTCCAGGGCTGTGGGCTCTaGAGCCTCCAGCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: REDLLAQLPGMFALLSLFQGCGL*SLQPHP
Trigger: GGGGTGGGGCTGGAGGCTGCAGAGCCCACAGCCCTG...GAACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACACAGGGCTGTGGGCTCTaGAGCCTCCAGCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTQGCGL*SLQPHP
Trigger: GGGGTGGGGCTGGAGGCTGCAGAGCCCACAGCCCTG...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp CATGGGGCAGTGGCCGCCACTGTGGCAGATGTAGTGCGCTCCCTTGATGACGCTGTGTCCATGGGGCAGTaGCCGCCACTGTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: HGAVAATVADVVRSLDDAVSMGQ*PPLWQM
Trigger: CATCTGCCACAGTGGCGGCCACTGCCCCATGGACAC...AGCGTCATCAAGGGAGCGCACTACATCTGCCACAGTGGCGGCCACTGCCCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420369.5
CDS-3UTR CCA 90 bp CATGGGGCAGTGGCCGCCACTGTGGCAGATGTAGTGCGCTCCCTTGATGACGCTGGGGTGAGGAAGCCCTaGGGGGCAAGGATGTGGCAT +
Preference number: 4 (lower is better)
Translates to: HGAVAATVADVVRSLDDAGVRKP*GARMWH
Trigger: ATGCCACATCCTTGCCCCCCAGGGCTTCCTCACCCC...AGCGTCATCAAGGGAGCGCACTACATCTGCCACAGTGGCGGCCACTGCCCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420369.5
CDS-3UTR CCA 90 bp ACGCATGTAGGTGTCCATGGGGCAGTGGCCGCCACTGTGGCAGATGTAGTGCGCTGGGTGGGCAGTCTCTaGAGCCCCCTTGCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: THVGVHGAVAATVADVVRWVGSL*SPLAGR
Trigger: TCTCCCAGCAAGGGGGCTCCAGAGACTGCCCACCCA...GCGCACTACATCTGCCACAGTGGCGGCCACTGCCCCATGGACACCTACATGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420369.5
CDS-3UTR CCA 90 bp GTAGGTGTCCATGGGGCAGTGGCCGCCACTGTGGCAGATGTAGTGCGCTCCCTTACCAGACTTCCTGGGTaGGCAGTCTCTGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: VGVHGAVAATVADVVRSLTRLPG*AVSGAP
Trigger: GGGGGCTCCAGAGACTGCCCACCCAGGAAGTCTGGT...AAGGGAGCGCACTACATCTGCCACAGTGGCGGCCACTGCCCCATGGACACCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420369.5
CDS-3UTR CCA 90 bp CATGGGGCAGTGGCCGCCACTGTGGCAGATGTAGTGCGCTCCCTTGATGACGCTGGCCACCAGACTTCCTaGGTGGGCAGTCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: HGAVAATVADVVRSLDDAGHQTS*VGSLWS
Trigger: GCTCCAGAGACTGCCCACCCAGGAAGTCTGGTGGCC...AGCGTCATCAAGGGAGCGCACTACATCTGCCACAGTGGCGGCCACTGCCCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420369.5
CDS-3UTR TCA 90 bp TCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGTCCCGCATGCCAGCCTaGCGGCATTTGCGAAGCCGA +
Preference number: 4 (lower is better)
Translates to: SVCSTSRRQPPGLSHPAKSRMPA*RHLRSR
Trigger: TCGGCTTCGCAAATGCCGTCAGGCTGGCATGCGGGA...CTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR TCA 90 bp TCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCATCGGTGGCCAGCCAGTaGGCTGGAGCTGAGCACAAG +
Preference number: 4 (lower is better)
Translates to: SQSVPLLGGSHQASAIRPSVASQ*AGAEHK
Trigger: CTTGTGCTCAGCTCCAGCTCACTGGCTGGCCACCGA...TGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
CDS-3UTR GCA 90 bp TTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCCTGGGCCTGGCTGCTTaGATCCTGTGCGCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: FSVCSTSRRQPPGLSHPALGLAA*ILCAWL
Trigger: AAGCCAGGCGCACAGGATGCAAGCAGCCAGGCCCAG...GGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp TGGGGTCAGCATGATCTTCAGACACAGCACAGTGTTAGCGAGGGCTCCACTGCTCAGGGCTGTGGGCTCTaGAGCCTCCAGCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: WGQHDLQTQHSVSEGSTAQGCGL*SLQPHP
Trigger: GGGGTGGGGCTGGAGGCTGCAGAGCCCACAGCCCTG...AGCAGTGGAGCCCTCGCTAACACTGTGCTGTGTCTGAAGATCATGCTGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR GCA 90 bp CCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGACCTGGAGCTGGTCCTaGACGTTGGGCCGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PSQSVPLLGGSHQASAIRTWSWS*TLGRSA
Trigger: TGCAGACCGGCCCAACGTGCAGGACCAGCTCCAGGT...CCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCGCTCTGAGTGGACGCTaGTCAGGGTCCGGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: FSVCSTSRRQPPGLSHPAALSGR*SGSGGS
Trigger: TGAGCCTCCGGACCCTGAGCAGCGTCCACTCAGAGC...GGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAGCTCTGAGTGGACGCTaGTCAGGGTCCGGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: SQSVPLLGGSHQASAIRPALSGR*SGSGGS
Trigger: TGAGCCTCCGGACCCTGAGCAGCGTCCACTCAGAGC...TGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGGCTCTGAGTGGACGCTaGTCAGGGTCCGGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: SVCSTSRRQPPGLSHPAKALSGR*SGSGGS
Trigger: TGAGCCTCCGGACCCTGAGCAGCGTCCACTCAGAGC...CTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp CAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAGCTCTGAGTGGACGCTaGTCAGGGTCCGGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: QSVPLLGGSHQASAIRPRALSGR*SGSGGS
Trigger: TGAGCCTCCGGACCCTGAGCAGCGTCCACTCAGAGC...TCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp CAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGACTCTGGAGAACCCTGTaGAAAGTGGCCCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: QSVPLLGGSHQASAIRPRLWRTL*KVAPRP
Trigger: GGGCCTGGGGGCCACTTTGCACAGGGTTCTCCAGAG...TCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR GCA 90 bp ACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTCCACCGCAGAGTGGGTaGGTCCGGGCGGCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: TGGSPCPAPRNVCPSQSVPPQSG*VRAAAC
Trigger: GCAAGCAGCCGCCCGGACGCACCCACTCTGCGGTGG...AACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616973.4
CDS-3UTR CCA 90 bp TCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCATGCATCCTGTGCGCCTaGCTTCCACAGCTCCACCGC +
Preference number: 4 (lower is better)
Translates to: SQSVPLLGGSHQASAIRPCILCA*LPQLHR
Trigger: GCGGTGGAGCTGTGGAAGCCAGGCGCACAGGATGCA...TGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp GTAGGTGTCCATGGGGCAGTGGCCGCCACTGTGGCAGATGTAGTGCGCTCCCTTGTACCCCCAGCAGAGTaGGGCATCCTGGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: VGVHGAVAATVADVVRSLVPPAE*GILASS
Trigger: AGAGGAAGCCAGGATGCCCCACTCTGCTGGGGGTAC...AAGGGAGCGCACTACATCTGCCACAGTGGCGGCCACTGCCCCATGGACACCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420369.5
CDS-3UTR CCA 90 bp TCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGGTGTCCATGGGGCAGTaGCCGCCACTGTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: SVCSTSRRQPPGLSHPAKVSMGQ*PPLWQM
Trigger: CATCTGCCACAGTGGCGGCCACTGCCCCATGGACAC...CTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp CCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGGTGTCCATGGGGCAGTaGCCGCCACTGTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: PSQSVPLLGGSHQASAIRVSMGQ*PPLWQM
Trigger: CATCTGCCACAGTGGCGGCCACTGCCCCATGGACAC...CCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp TCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGGGGGTGAGGAAGCCCTaGGGGGCAAGGATGTGGCAT +
Preference number: 4 (lower is better)
Translates to: SVCSTSRRQPPGLSHPAKGVRKP*GARMWH
Trigger: ATGCCACATCCTTGCCCCCCAGGGCTTCCTCACCCC...CTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp TTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCGGGGTGAGGAAGCCCTaGGGGGCAAGGATGTGGCAT +
Preference number: 4 (lower is better)
Translates to: FSVCSTSRRQPPGLSHPAGVRKP*GARMWH
Trigger: ATGCCACATCCTTGCCCCCCAGGGCTTCCTCACCCC...GGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp CCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGGGGTGAGGAAGCCCTaGGGGGCAAGGATGTGGCAT +
Preference number: 4 (lower is better)
Translates to: PFSVCSTSRRQPPGLSHPGVRKP*GARMWH
Trigger: ATGCCACATCCTTGCCCCCCAGGGCTTCCTCACCCC...CGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp CAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGACCGGCTATGGGGATCTaGTGCCATGGGCCAAGGCGT +
Preference number: 4 (lower is better)
Translates to: QSVPLLGGSHQASAIRPRPAMGI*CHGPRR
Trigger: ACGCCTTGGCCCATGGCACCAGATCCCCATAGCCGG...TCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395397.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACACGGGCCTCCCGGCTATaGGGATCTGGTGCCATGGGC +
Preference number: 4 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTRASRL*GSGAMG
Trigger: GCCCATGGCACCAGATCCCCATAGCCGGGAGGCCCG...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395397.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp TTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCCTCTCTACCTGGAGCTaGTCCTGCACGTTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: FSVCSTSRRQPPGLSHPALSTWS*SCTLGR
Trigger: CCGGCCCAACGTGCAGGACCAGCTCCAGGTAGAGAG...GGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp CAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGACTCTCTACCTGGAGCTaGTCCTGCACGTTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: QSVPLLGGSHQASAIRPRLSTWS*SCTLGR
Trigger: CCGGCCCAACGTGCAGGACCAGCTCCAGGTAGAGAG...TCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp CCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGCTCTCTACCTGGAGCTaGTCCTGCACGTTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: PFSVCSTSRRQPPGLSHPLSTWS*SCTLGR
Trigger: CCGGCCCAACGTGCAGGACCAGCTCCAGGTAGAGAG...CGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp CAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGATGGGTGGGCAGTCTCTaGAGCCCCCTTGCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: QSVPLLGGSHQASAIRPRWVGSL*SPLAGR
Trigger: TCTCCCAGCAAGGGGGCTCCAGAGACTGCCCACCCA...TCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
CDS-3UTR CCA 90 bp CCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGACCAGACTTCCTGGGTaGGCAGTCTCTGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: PFSVCSTSRRQPPGLSHPTRLPG*AVSGAP
Trigger: GGGGGCTCCAGAGACTGCCCACCCAGGAAGTCTGGT...CGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
CDS-3UTR TCA 90 bp GTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAATCCCGCATGCCAGCCTaGCGGCATTTGCGAAGCCGA +
Preference number: 4 (lower is better)
Translates to: VCSTSRRQPPGLSHPAKKSRMPA*RHLRSR
Trigger: TCGGCTTCGCAAATGCCGTCAGGCTGGCATGCGGGA...TTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR TCA 90 bp GTAGGTGTCCATGGGGCAGTGGCCGCCACTGTGGCAGATGTAGTGCGCTCCCTTGCGGATCTGTTCTTCTaGCAGGACACACTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: VGVHGAVAATVADVVRSLADLFF*QDTLLP
Trigger: CGGGAGGAGTGTGTCCTGTCAGAAGAACAGATCCGC...AAGGGAGCGCACTACATCTGCCACAGTGGCGGCCACTGCCCCATGGACACCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420369.5
CDS-3UTR TCA 90 bp GCCGCCACTGTGGCAGATGTAGTGCGCTCCCTTGATGACGCTGCGGCGGAAGAAGGCAAGGATGTGGCATaGGCCTGTTCCTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: AATVADVVRSLDDAAAEEGKDVA*ACSSSC
Trigger: GCAAGAGGAGGAACAGGCTCATGCCACATCCTTGCC...TTCTTCCGCCGCAGCGTCATCAAGGGAGCGCACTACATCTGCCACAGTGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420369.5
CDS-3UTR GCA 90 bp CCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGAGACCACGACCCTCCTaGACGCAATCCCACCGAGAC +
Preference number: 4 (lower is better)
Translates to: PFSVCSTSRRQPPGLSHPRPRPS*TQSHRD
Trigger: GTCTCGGTGGGATTGCGTGCAGGAGGGTCGTGGTCT...CGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000481889.6
CDS-3UTR GCA 90 bp TGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCTGGGCCTGGCTGCTTaGATCCTGTGCGCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: CPSQSVPLLGGSHQASAILGLAA*ILCAWL
Trigger: AAGCCAGGCGCACAGGATGCAAGCAGCCAGGCCCAG...GATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp GCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTCTGGGCCTGGCTGCTTaGATCCTGTGCGCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: ATGGSPCPAPRNVCPSQSLGLAA*ILCAWL
Trigger: AAGCCAGGCGCACAGGATGCAAGCAGCCAGGCCCAG...AGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp TTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGGGCTGTGGGCTCTaGAGCCTCCAGCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: FNATGGSPCPAPRNVCPSQGCGL*SLQPHP
Trigger: GGGGTGGGGCTGGAGGCTGCAGAGCCCACAGCCCTG...AGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp TGCCGCTTCAGTTTCTTCAGGCGGATCTGTTCTTCTGACAGGACACACTCCTCCCAGGGCTGTGGGCTCTaGAGCCTCCAGCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: CRFSFFRRICSSDRTHSSQGCGL*SLQPHP
Trigger: GGGGTGGGGCTGGAGGCTGCAGAGCCCACAGCCCTG...GGAGGAGTGTGTCCTGTCAGAAGAACAGATCCGCCTGAAGAAACTGAAGCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420369.5
CDS-3UTR GCA 90 bp GACGCATGTAGGTGTCCATGGGGCAGTGGCCGCCACTGTGGCAGATGTAGTGCGGGCGGAAGAATCCCTTaGAGCCCTCGCAGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: DACRCPWGSGRHCGRCSAGGRIP*SPRSSE
Trigger: TTCTGAGCTGCGAGGGCTGCAAGGGATTCTTCCGCC...CGCACTACATCTGCCACAGTGGCGGCCACTGCCCCATGGACACCTACATGCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420369.5
CDS-3UTR GCA 90 bp CAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGACAGCCTGACGGCATTTaGGAAGCCGACACTCCTGGC +
Preference number: 4 (lower is better)
Translates to: QSVPLLGGSHQASAIRPRQPDGI*EADTPG
Trigger: GCCAGGAGTGTCGGCTTCGCAAATGCCGTCAGGCTG...TCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCACAGCCTGACGGCATTTaGGAAGCCGACACTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SQSVPLLGGSHQASAIRPQPDGI*EADTPG
Trigger: GCCAGGAGTGTCGGCTTCGCAAATGCCGTCAGGCTG...TGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCCAGCCTGACGGCATTTaGGAAGCCGACACTCCTGGC +
Preference number: 4 (lower is better)
Translates to: FSVCSTSRRQPPGLSHPAQPDGI*EADTPG
Trigger: GCCAGGAGTGTCGGCTTCGCAAATGCCGTCAGGCTG...GGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp CCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCAGCCTGACGGCATTTaGGAAGCCGACACTCCTGGC +
Preference number: 4 (lower is better)
Translates to: PSQSVPLLGGSHQASAIRQPDGI*EADTPG
Trigger: GCCAGGAGTGTCGGCTTCGCAAATGCCGTCAGGCTG...CCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCACGCCGGTTACACTGTTaGTGGGCAGCGACGAGCTTC +
Preference number: 4 (lower is better)
Translates to: SQSVPLLGGSHQASAIRPRRLHC*WAATSF
Trigger: GAAGCTCGTCGCTGCCCAGCAACAGTGTAACCGGCG...TGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp CAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGACGCCGGTTACACTGTTaGTGGGCAGCGACGAGCTTC +
Preference number: 4 (lower is better)
Translates to: QSVPLLGGSHQASAIRPRRRLHC*WAATSF
Trigger: GAAGCTCGTCGCTGCCCAGCAACAGTGTAACCGGCG...TCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGGCTATGGGGATCTGGTaGCATGGGCCAAGGCGTGAC +
Preference number: 4 (lower is better)
Translates to: SVCSTSRRQPPGLSHPAKAMGIW*HGPRRD
Trigger: GTCACGCCTTGGCCCATGGCACCAGATCCCCATAGC...CTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395397.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp CAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAGCTATGGGGATCTGGTaGCATGGGCCAAGGCGTGAC +
Preference number: 4 (lower is better)
Translates to: QSVPLLGGSHQASAIRPRAMGIW*HGPRRD
Trigger: GTCACGCCTTGGCCCATGGCACCAGATCCCCATAGC...TCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395397.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp GCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTTCCTCCCGGCTGAGCTaGAGGAAGCCGGGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: ATGGSPCPAPRNVCPSQSSSRLS*RKPGSC
Trigger: ACAGCTACCCGGCTTCCTGCAGCTCAGCCGGGAGGA...AGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp GTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGACCTGGAGCTGGTCCTaGACGTTGGGCCGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: VPLLGGSHQASAIRPRKQTWSWS*TLGRSA
Trigger: TGCAGACCGGCCCAACGTGCAGGACCAGCTCCAGGT...CTGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp GTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAGCTCTGAGTGGACGCTaGTCAGGGTCCGGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: VCSTSRRQPPGLSHPAKKALSGR*SGSGGS
Trigger: TGAGCCTCCGGACCCTGAGCAGCGTCCACTCAGAGC...TTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp GCCGCCACTGTGGCAGATGTAGTGCGCTCCCTTGATGACGCTGCGGCGGAAGAATCTCTGGAGCCCCCTTaGTGGGAGAAGAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: AATVADVVRSLDDAAAEESLEPP*WEKRMV
Trigger: CACCATCCTCTTCTCCCAGCAAGGGGGCTCCAGAGA...TTCTTCCGCCGCAGCGTCATCAAGGGAGCGCACTACATCTGCCACAGTGGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420369.5
CDS-3UTR GCA 90 bp TTAGCGAGGGCTCCACTGCTCAGTAGCCACAAAACTCGCAACCCTTTGACTCTCGTGCGTCCGGGCGGCTaGTTGCAGGTGCCACCCAGC +
Preference number: 4 (lower is better)
Translates to: LARAPLLSSHKTRNPLTLVRPGG*LQVPPS
Trigger: GCTGGGTGGCACCTGCAAGCAGCCGCCCGGACGCAC...GAGAGTCAAAGGGTTGCGAGTTTTGTGGCTACTGAGCAGTGGAGCCCTCGCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616973.4
CDS-3UTR CCA 90 bp GTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGTGCATCCTGTGCGCCTaGCTTCCACAGCTCCACCGC +
Preference number: 4 (lower is better)
Translates to: VPLLGGSHQASAIRPRKQCILCA*LPQLHR
Trigger: GCGGTGGAGCTGTGGAAGCCAGGCGCACAGGATGCA...CTGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp TCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGGTACCCCCAGCAGAGTaGGGCATCCTGGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SVCSTSRRQPPGLSHPAKVPPAE*GILASS
Trigger: AGAGGAAGCCAGGATGCCCCACTCTGCTGGGGGTAC...CTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp TTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCGTACCCCCAGCAGAGTaGGGCATCCTGGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: FSVCSTSRRQPPGLSHPAVPPAE*GILASS
Trigger: AGAGGAAGCCAGGATGCCCCACTCTGCTGGGGGTAC...GGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp TGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCGTGTCCATGGGGCAGTaGCCGCCACTGTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: CPSQSVPLLGGSHQASAIVSMGQ*PPLWQM
Trigger: CATCTGCCACAGTGGCGGCCACTGCCCCATGGACAC...GATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp GTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGGTGTCCATGGGGCAGTaGCCGCCACTGTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: VPLLGGSHQASAIRPRKQVSMGQ*PPLWQM
Trigger: CATCTGCCACAGTGGCGGCCACTGCCCCATGGACAC...CTGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp TCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGGCATGTAGGTGTCCATaGGGCAGTGGCCGCCACTGT +
Preference number: 4 (lower is better)
Translates to: SVCSTSRRQPPGLSHPAKACRCP*GSGRHC
Trigger: ACAGTGGCGGCCACTGCCCCATGGACACCTACATGC...CTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp TTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCGCATGTAGGTGTCCATaGGGCAGTGGCCGCCACTGT +
Preference number: 4 (lower is better)
Translates to: FSVCSTSRRQPPGLSHPAACRCP*GSGRHC
Trigger: ACAGTGGCGGCCACTGCCCCATGGACACCTACATGC...GGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp CTTGCGACGCATGTAGGTGTCCATGGGGCAGTGGCCGCCACTGTGGCAGATGTAGCATGTAGGTGTCCATaGGGCAGTGGCCGCCACTGT +
Preference number: 4 (lower is better)
Translates to: LATHVGVHGAVAATVADVACRCP*GSGRHC
Trigger: ACAGTGGCGGCCACTGCCCCATGGACACCTACATGC...TACATCTGCCACAGTGGCGGCCACTGCCCCATGGACACCTACATGCGTCGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420369.5
CDS-3UTR CCA 90 bp TCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAGCATGTAGGTGTCCATaGGGCAGTGGCCGCCACTGT +
Preference number: 4 (lower is better)
Translates to: SQSVPLLGGSHQASAIRPACRCP*GSGRHC
Trigger: ACAGTGGCGGCCACTGCCCCATGGACACCTACATGC...TGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp TGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCGGGGTGAGGAAGCCCTaGGGGGCAAGGATGTGGCAT +
Preference number: 4 (lower is better)
Translates to: CPSQSVPLLGGSHQASAIGVRKP*GARMWH
Trigger: ATGCCACATCCTTGCCCCCCAGGGCTTCCTCACCCC...GATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp GTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAGGGGTGAGGAAGCCCTaGGGGGCAAGGATGTGGCAT +
Preference number: 4 (lower is better)
Translates to: VCSTSRRQPPGLSHPAKKGVRKP*GARMWH
Trigger: ATGCCACATCCTTGCCCCCCAGGGCTTCCTCACCCC...TTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp TGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCTCTCTACCTGGAGCTaGTCCTGCACGTTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: CPSQSVPLLGGSHQASAILSTWS*SCTLGR
Trigger: CCGGCCCAACGTGCAGGACCAGCTCCAGGTAGAGAG...GATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp CCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGTCCAGAAGTCTCGGTaGCCAGCCAGTGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PFSVCSTSRRQPPGLSHPVQKSR*PASELE
Trigger: CTCCAGCTCACTGGCTGGCCACCGAGACTTCTGGAC...CGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
CDS-3UTR CCA 90 bp TCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAGTCCAGAAGTCTCGGTaGCCAGCCAGTGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SQSVPLLGGSHQASAIRPVQKSR*PASELE
Trigger: CTCCAGCTCACTGGCTGGCCACCGAGACTTCTGGAC...TGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
CDS-3UTR CCA 90 bp CCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCTGGAGCCCCCTTGCTaGGAGAAGAGGATGGTGCAG +
Preference number: 4 (lower is better)
Translates to: PSQSVPLLGGSHQASAIRLEPPC*EKRMVQ
Trigger: CTGCACCATCCTCTTCTCCCAGCAAGGGGGCTCCAG...CCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
CDS-3UTR CCA 90 bp TGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCGGCCACCAGACTTCCTaGGTGGGCAGTCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: CPSQSVPLLGGSHQASAIGHQTS*VGSLWS
Trigger: GCTCCAGAGACTGCCCACCCAGGAAGTCTGGTGGCC...GATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
CDS-3UTR TCA 90 bp TTGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATTCCCGCATGCCAGCCTaGCGGCATTTGCGAAGCCGA +
Preference number: 4 (lower is better)
Translates to: LPFSVCSTSRRQPPGLSHSRMPA*RHLRSR
Trigger: TCGGCTTCGCAAATGCCGTCAGGCTGGCATGCGGGA...ATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR TCA 90 bp TCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAGCGGATCTGTTCTTCTaGCAGGACACACTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: SQSVPLLGGSHQASAIRPADLFF*QDTLLP
Trigger: CGGGAGGAGTGTGTCCTGTCAGAAGAACAGATCCGC...TGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR TCA 90 bp TTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCGCGGATCTGTTCTTCTaGCAGGACACACTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: FSVCSTSRRQPPGLSHPAADLFF*QDTLLP
Trigger: CGGGAGGAGTGTGTCCTGTCAGAAGAACAGATCCGC...GGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR TCA 90 bp CCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGGCAAGGATGTGGCATaGGCCTGTTCCTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: PFSVCSTSRRQPPGLSHPGKDVA*ACSSSC
Trigger: GCAAGAGGAGGAACAGGCTCATGCCACATCCTTGCC...CGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR TCA 90 bp GTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGCCCTCACTCCAACACTaGGGACAGCTCACTCCACCC +
Preference number: 4 (lower is better)
Translates to: VPLLGGSHQASAIRPRKQPSLQH*GQLTPP
Trigger: GGGTGGAGTGAGCTGTCCTCAGTGTTGGAGTGAGGG...CTGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467728.5
CDS-3UTR TCA 90 bp CCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCATAGATTACAACGGTaGTGGCGGGCAAGCGGTCCG +
Preference number: 4 (lower is better)
Translates to: PSQSVPLLGGSHQASAIRHRLQR*WRASGP
Trigger: CGGACCGCTTGCCCGCCATCACCGTTGTAATCTATG...CCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616973.4
CDS-3UTR GCA 90 bp TCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAATCCCACCGAGACTaGGCCTTTTCCCCGCACCCC +
Preference number: 4 (lower is better)
Translates to: SVPLLGGSHQASAIRPRKQSHRD*AFSPHP
Trigger: GGGGTGCGGGGAAAAGGCGCAGTCTCGGTGGGATTG...TTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395397.7
ENST00000405576.5
CDS-3UTR GCA 90 bp TGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCAGACCACGACCCTCCTaGACGCAATCCCACCGAGAC +
Preference number: 4 (lower is better)
Translates to: CPSQSVPLLGGSHQASAIRPRPS*TQSHRD
Trigger: GTCTCGGTGGGATTGCGTGCAGGAGGGTCGTGGTCT...GATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000481889.6
CDS-3UTR GCA 90 bp CGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTCCTGGGCCTGGCTGCTTaGATCCTGTGCGCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: REDLLAQLPGMFALLSLFLGLAA*ILCAWL
Trigger: AAGCCAGGCGCACAGGATGCAAGCAGCCAGGCCCAG...GAACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACACTGGGCCTGGCTGCTTaGATCCTGTGCGCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTLGLAA*ILCAWL
Trigger: AAGCCAGGCGCACAGGATGCAAGCAGCCAGGCCCAG...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp TTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCTGTCCCCACACACGCTaGATAGCTCGTTCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: FSVCSTSRRQPPGLSHPACPHTR*IARSPA
Trigger: TGCTGGGGAACGAGCTATGCAGCGTGTGTGGGGACA...GGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp CCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGTGTCCCCACACACGCTaGATAGCTCGTTCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: PFSVCSTSRRQPPGLSHPCPHTR*IARSPA
Trigger: TGCTGGGGAACGAGCTATGCAGCGTGTGTGGGGACA...CGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp CAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGATGTCCCCACACACGCTaGATAGCTCGTTCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: QSVPLLGGSHQASAIRPRCPHTR*IARSPA
Trigger: TGCTGGGGAACGAGCTATGCAGCGTGTGTGGGGACA...TCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGGGCGGAAGAATCCCTTaGAGCCCTCGCAGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: SVCSTSRRQPPGLSHPAKGGRIP*SPRSSE
Trigger: TTCTGAGCTGCGAGGGCTGCAAGGGATTCTTCCGCC...CTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp CCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGGGCGGAAGAATCCCTTaGAGCCCTCGCAGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: PSQSVPLLGGSHQASAIRGGRIP*SPRSSE
Trigger: TTCTGAGCTGCGAGGGCTGCAAGGGATTCTTCCGCC...CCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCAGCCTGACGGCATTTaGGAAGCCGACACTCCTGGC +
Preference number: 4 (lower is better)
Translates to: CPSQSVPLLGGSHQASAIQPDGI*EADTPG
Trigger: GCCAGGAGTGTCGGCTTCGCAAATGCCGTCAGGCTG...GATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp GTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAACGCCGGTTACACTGTTaGTGGGCAGCGACGAGCTTC +
Preference number: 4 (lower is better)
Translates to: VCSTSRRQPPGLSHPAKKRRLHC*WAATSF
Trigger: GAAGCTCGTCGCTGCCCAGCAACAGTGTAACCGGCG...TTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp GTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGCGCCGGTTACACTGTTaGTGGGCAGCGACGAGCTTC +
Preference number: 4 (lower is better)
Translates to: VPLLGGSHQASAIRPRKQRRLHC*WAATSF
Trigger: GAAGCTCGTCGCTGCCCAGCAACAGTGTAACCGGCG...CTGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGCCGGTTACACTGTTaGTGGGCAGCGACGAGCTTC +
Preference number: 4 (lower is better)
Translates to: CPSQSVPLLGGSHQASAIRRLHC*WAATSF
Trigger: GAAGCTCGTCGCTGCCCAGCAACAGTGTAACCGGCG...GATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCGCTATGGGGATCTGGTaGCATGGGCCAAGGCGTGAC +
Preference number: 4 (lower is better)
Translates to: CPSQSVPLLGGSHQASAIAMGIW*HGPRRD
Trigger: GTCACGCCTTGGCCCATGGCACCAGATCCCCATAGC...GATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395397.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp TCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAATCCTCCCGGCTGAGCTaGAGGAAGCCGGGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: SVPLLGGSHQASAIRPRKSSRLS*RKPGSC
Trigger: ACAGCTACCCGGCTTCCTGCAGCTCAGCCGGGAGGA...TTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395397.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp CACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTCCTCCCGGCTGAGCTaGAGGAAGCCGGGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: HGRISLPSSQECLPFSVCSSRLS*RKPGSC
Trigger: ACAGCTACCCGGCTTCCTGCAGCTCAGCCGGGAGGA...ACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp CGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTCTCCTCCCGGCTGAGCTaGAGGAAGCCGGGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: REDLLAQLPGMFALLSLFSSRLS*RKPGSC
Trigger: ACAGCTACCCGGCTTCCTGCAGCTCAGCCGGGAGGA...GAACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp TCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAAACCTGGAGCTGGTCCTaGACGTTGGGCCGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: SVPLLGGSHQASAIRPRKTWSWS*TLGRSA
Trigger: TGCAGACCGGCCCAACGTGCAGGACCAGCTCCAGGT...TTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAAGCTCTGAGTGGACGCTaGTCAGGGTCCGGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: SVPLLGGSHQASAIRPRKALSGR*SGSGGS
Trigger: TGAGCCTCCGGACCCTGAGCAGCGTCCACTCAGAGC...TTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp CGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTCGCTCTGAGTGGACGCTaGTCAGGGTCCGGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: REDLLAQLPGMFALLSLFALSGR*SGSGGS
Trigger: TGAGCCTCCGGACCCTGAGCAGCGTCCACTCAGAGC...GAACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp CAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGATCTCTGGAGCCCCCTTaGTGGGAGAAGAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: QSVPLLGGSHQASAIRPRSLEPP*WEKRMV
Trigger: CACCATCCTCTTCTCCCAGCAAGGGGGCTCCAGAGA...TCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
CDS-3UTR GCA 90 bp ATCTTCAGACACAGCACAGTGTTAGCGAGGGCTCCACTGCTCAGTAGCCACAAAGTCCGGGCGGCTGCTTaGAGGTGCCACCCAGCGGGT +
Preference number: 4 (lower is better)
Translates to: IFRHSTVLARAPLLSSHKVRAAA*RCHPAG
Trigger: ACCCGCTGGGTGGCACCTGCAAGCAGCCGCCCGGAC...TTTGTGGCTACTGAGCAGTGGAGCCCTCGCTAACACTGTGCTGTGTCTGAAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616973.4
CDS-3UTR CCA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACATGCATCCTGTGCGCCTaGCTTCCACAGCTCCACCGC +
Preference number: 4 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTCILCA*LPQLHR
Trigger: GCGGTGGAGCTGTGGAAGCCAGGCGCACAGGATGCA...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp ACTGTGGCAGATGTAGTGCGCTCCCTTGATGACGCTGCGGCGGAAGAATCCCTTTGCATCCTGTGCGCCTaGCTTCCACAGCTCCACCGC +
Preference number: 4 (lower is better)
Translates to: TVADVVRSLDDAAAEESLCILCA*LPQLHR
Trigger: GCGGTGGAGCTGTGGAAGCCAGGCGCACAGGATGCA...AAGGGATTCTTCCGCCGCAGCGTCATCAAGGGAGCGCACTACATCTGCCACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420369.5
CDS-3UTR CCA 90 bp GCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTACCCCCAGCAGAGTaGGGCATCCTGGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: ATGGSPCPAPRNVCPSQSVPPAE*GILASS
Trigger: AGAGGAAGCCAGGATGCCCCACTCTGCTGGGGGTAC...AGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp TCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAGTGGACGGATCTCTGTaGGTTCTGAAGGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SQSVPLLGGSHQASAIRPVDGSL*VLKGAL
Trigger: CAGAGCCCCCTTCAGAACCCACAGAGATCCGTCCAC...TGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp TTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCGTGGACGGATCTCTGTaGGTTCTGAAGGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: FSVCSTSRRQPPGLSHPAVDGSL*VLKGAL
Trigger: CAGAGCCCCCTTCAGAACCCACAGAGATCCGTCCAC...GGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp TCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGGTGGACGGATCTCTGTaGGTTCTGAAGGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SVCSTSRRQPPGLSHPAKVDGSL*VLKGAL
Trigger: CAGAGCCCCCTTCAGAACCCACAGAGATCCGTCCAC...CTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp CCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGGTGGACGGATCTCTGTaGGTTCTGAAGGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PSQSVPLLGGSHQASAIRVDGSL*VLKGAL
Trigger: CAGAGCCCCCTTCAGAACCCACAGAGATCCGTCCAC...CCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp CGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTCGTGTCCATGGGGCAGTaGCCGCCACTGTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: REDLLAQLPGMFALLSLFVSMGQ*PPLWQM
Trigger: CATCTGCCACAGTGGCGGCCACTGCCCCATGGACAC...GAACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGTGTCCATGGGGCAGTaGCCGCCACTGTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTVSMGQ*PPLWQM
Trigger: CATCTGCCACAGTGGCGGCCACTGCCCCATGGACAC...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp TCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAAGTGTCCATGGGGCAGTaGCCGCCACTGTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: SVPLLGGSHQASAIRPRKVSMGQ*PPLWQM
Trigger: CATCTGCCACAGTGGCGGCCACTGCCCCATGGACAC...TTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGGGGTGAGGAAGCCCTaGGGGGCAAGGATGTGGCAT +
Preference number: 4 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTGVRKP*GARMWH
Trigger: ATGCCACATCCTTGCCCCCCAGGGCTTCCTCACCCC...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp CACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTGGGGTGAGGAAGCCCTaGGGGGCAAGGATGTGGCAT +
Preference number: 4 (lower is better)
Translates to: HGRISLPSSQECLPFSVCGVRKP*GARMWH
Trigger: ATGCCACATCCTTGCCCCCCAGGGCTTCCTCACCCC...ACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp TCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGCGGTTACACTGTTGCTaGGCAGCGACGAGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: SVCSTSRRQPPGLSHPAKRLHCC*AATSFS
Trigger: CGAGAAGCTCGTCGCTGCCCAGCAACAGTGTAACCG...CTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp CAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGACGGTTACACTGTTGCTaGGCAGCGACGAGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: QSVPLLGGSHQASAIRPRRLHCC*AATSFS
Trigger: CGAGAAGCTCGTCGCTGCCCAGCAACAGTGTAACCG...TCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp CCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCGGTTACACTGTTGCTaGGCAGCGACGAGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: PSQSVPLLGGSHQASAIRRLHCC*AATSFS
Trigger: CGAGAAGCTCGTCGCTGCCCAGCAACAGTGTAACCG...CCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp TCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACCGGCTATGGGGATCTaGTGCCATGGGCCAAGGCGT +
Preference number: 4 (lower is better)
Translates to: SVPLLGGSHQASAIRPRKPAMGI*CHGPRR
Trigger: ACGCCTTGGCCCATGGCACCAGATCCCCATAGCCGG...TTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395397.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp TTGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCTATGGGGATCTaGTGCCATGGGCCAAGGCGT +
Preference number: 4 (lower is better)
Translates to: LPFSVCSTSRRQPPGLSHPAMGI*CHGPRR
Trigger: ACGCCTTGGCCCATGGCACCAGATCCCCATAGCCGG...ATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395397.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp TCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTCGGGCCTCCCGGCTATaGGGATCTGGTGCCATGGGC +
Preference number: 4 (lower is better)
Translates to: SFNATGGSPCPAPRNVCPRASRL*GSGAMG
Trigger: GCCCATGGCACCAGATCCCCATAGCCGGGAGGCCCG...AGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR CCA 90 bp CACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTCTCTCTACCTGGAGCTaGTCCTGCACGTTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: HGRISLPSSQECLPFSVCLSTWS*SCTLGR
Trigger: CCGGCCCAACGTGCAGGACCAGCTCCAGGTAGAGAG...ACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp TCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACTCTCTACCTGGAGCTaGTCCTGCACGTTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: SVPLLGGSHQASAIRPRKLSTWS*SCTLGR
Trigger: CCGGCCCAACGTGCAGGACCAGCTCCAGGTAGAGAG...TTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp CCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGTGCAGCCTCTCTACCTaGAGCTGGTCCTGCACGTTG +
Preference number: 4 (lower is better)
Translates to: PSQSVPLLGGSHQASAIRCSLST*SWSCTL
Trigger: CAACGTGCAGGACCAGCTCCAGGTAGAGAGGCTGCA...CCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp TCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGCATGGGGATGGTGGATaGAGACGTAGGCATGCAGGG +
Preference number: 4 (lower is better)
Translates to: SVCSTSRRQPPGLSHPAKHGDGG*RRRHAG
Trigger: CCCTGCATGCCTACGTCTCCATCCACCATCCCCATG...CTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp TTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCCATGGGGATGGTGGATaGAGACGTAGGCATGCAGGG +
Preference number: 4 (lower is better)
Translates to: FSVCSTSRRQPPGLSHPAHGDGG*RRRHAG
Trigger: CCCTGCATGCCTACGTCTCCATCCACCATCCCCATG...GGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp CCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGAACACTTGCTCTGAGTaGACGCTGCTCAGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: PFSVCSTSRRQPPGLSHPNTCSE*TLLRVR
Trigger: CCGGACCCTGAGCAGCGTCCACTCAGAGCAAGTGTT...CGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp CAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAACACTTGCTCTGAGTaGACGCTGCTCAGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: QSVPLLGGSHQASAIRPRNTCSE*TLLRVR
Trigger: CCGGACCCTGAGCAGCGTCCACTCAGAGCAAGTGTT...TCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp TGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCGTCCAGAAGTCTCGGTaGCCAGCCAGTGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: CPSQSVPLLGGSHQASAIVQKSR*PASELE
Trigger: CTCCAGCTCACTGGCTGGCCACCGAGACTTCTGGAC...GATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
CDS-3UTR CCA 90 bp TGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCTGGAGCCCCCTTGCTaGGAGAAGAGGATGGTGCAG +
Preference number: 4 (lower is better)
Translates to: CPSQSVPLLGGSHQASAILEPPC*EKRMVQ
Trigger: CTGCACCATCCTCTTCTCCCAGCAAGGGGGCTCCAG...GATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
CDS-3UTR CCA 90 bp TTGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATTGGGTGGGCAGTCTCTaGAGCCCCCTTGCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LPFSVCSTSRRQPPGLSHWVGSL*SPLAGR
Trigger: TCTCCCAGCAAGGGGGCTCCAGAGACTGCCCACCCA...ATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
CDS-3UTR CCA 90 bp CACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTGGCCACCAGACTTCCTaGGTGGGCAGTCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: HGRISLPSSQECLPFSVCGHQTS*VGSLWS
Trigger: GCTCCAGAGACTGCCCACCCAGGAAGTCTGGTGGCC...ACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
CDS-3UTR CCA 90 bp CAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGATCCCAGCTCGATGTCTaGAGGCCCCTCCCACAGATA +
Preference number: 4 (lower is better)
Translates to: QSVPLLGGSHQASAIRPRSQLDV*RPLPQI
Trigger: TATCTGTGGGAGGGGCCTCCAGACATCGAGCTGGGA...TCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481889.6
CDS-3UTR CCA 90 bp GACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTAGCTCCACCGCAGAGTaGGTGCGTCCGGGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: DSLLMPREDLLAQLPGMFSSTAE*VRPGGC
Trigger: GCAGCCGCCCGGACGCACCCACTCTGCGGTGGAGCT...AAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616973.4
CDS-3UTR TCA 90 bp ACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTTCCCGCATGCCAGCCTaGCGGCATTTGCGAAGCCGA +
Preference number: 4 (lower is better)
Translates to: TGGSPCPAPRNVCPSQSVSRMPA*RHLRSR
Trigger: TCGGCTTCGCAAATGCCGTCAGGCTGGCATGCGGGA...AACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR TCA 90 bp GTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAGCGGATCTGTTCTTCTaGCAGGACACACTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: VCSTSRRQPPGLSHPAKKADLFF*QDTLLP
Trigger: CGGGAGGAGTGTGTCCTGTCAGAAGAACAGATCCGC...TTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR TCA 90 bp GTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGGCGGATCTGTTCTTCTaGCAGGACACACTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: VPLLGGSHQASAIRPRKQADLFF*QDTLLP
Trigger: CGGGAGGAGTGTGTCCTGTCAGAAGAACAGATCCGC...CTGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR TCA 90 bp GTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAGGCAAGGATGTGGCATaGGCCTGTTCCTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: VCSTSRRQPPGLSHPAKKGKDVA*ACSSSC
Trigger: GCAAGAGGAGGAACAGGCTCATGCCACATCCTTGCC...TTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR TCA 90 bp TGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCGGCAAGGATGTGGCATaGGCCTGTTCCTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: CPSQSVPLLGGSHQASAIGKDVA*ACSSSC
Trigger: GCAAGAGGAGGAACAGGCTCATGCCACATCCTTGCC...GATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR TCA 90 bp GCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGGCAAGGATGTGGCATaGGCCTGTTCCTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: ATGGSPCPAPRNVCPSQSGKDVA*ACSSSC
Trigger: GCAAGAGGAGGAACAGGCTCATGCCACATCCTTGCC...AGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR TCA 90 bp TCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGTGCAAACACTTGCTCTaGGTGGACGCTGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: SVCSTSRRQPPGLSHPAKCKHLL*VDAAQG
Trigger: ACCCTGAGCAGCGTCCACTCAGAGCAAGTGTTTGCA...CTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR TCA 90 bp CCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGTGCAAACACTTGCTCTaGGTGGACGCTGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: PFSVCSTSRRQPPGLSHPCKHLL*VDAAQG
Trigger: ACCCTGAGCAGCGTCCACTCAGAGCAAGTGTTTGCA...CGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR TCA 90 bp TCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCACCAGAAGCATCACCGTaGCTCGAAGCCGGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: SQSVPLLGGSHQASAIRPPEASP*LEAGQK
Trigger: TTTCTGACCGGCTTCGAGTCACGGTGATGCTTCTGG...TGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000527949.1
CDS-3UTR TCA 90 bp TTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCCCAGAAGCATCACCGTaGCTCGAAGCCGGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: FSVCSTSRRQPPGLSHPAPEASP*LEAGQK
Trigger: TTTCTGACCGGCTTCGAGTCACGGTGATGCTTCTGG...GGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000527949.1
CDS-3UTR TCA 90 bp CCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAGAAGCATCACCGTaGCTCGAAGCCGGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: PSQSVPLLGGSHQASAIRPEASP*LEAGQK
Trigger: TTTCTGACCGGCTTCGAGTCACGGTGATGCTTCTGG...CCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000527949.1
CDS-3UTR TCA 90 bp TGGGGTCAGCATGATCTTCAGACACAGCACAGTGTTAGCGAGGGCTCCACTGCTTCGGTGGCCAGCCAGTaGGCTGGAGCTGAGCACAAG +
Preference number: 4 (lower is better)
Translates to: WGQHDLQTQHSVSEGSTASVASQ*AGAEHK
Trigger: CTTGTGCTCAGCTCCAGCTCACTGGCTGGCCACCGA...AGCAGTGGAGCCCTCGCTAACACTGTGCTGTGTCTGAAGATCATGCTGACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441012.7
CDS-3UTR GCA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAAGACCACGACCCTCCTaGACGCAATCCCACCGAGAC +
Preference number: 4 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTRPRPS*TQSHRD
Trigger: GTCTCGGTGGGATTGCGTGCAGGAGGGTCGTGGTCT...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000481889.6
CDS-3UTR GCA 90 bp ACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTCTGGGCCTGGCTGCTTaGATCCTGTGCGCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: TGGSPCPAPRNVCPSQSVLGLAA*ILCAWL
Trigger: AAGCCAGGCGCACAGGATGCAAGCAGCCAGGCCCAG...AACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp GTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGTGTCCCCACACACGCTaGATAGCTCGTTCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: VPLLGGSHQASAIRPRKQCPHTR*IARSPA
Trigger: TGCTGGGGAACGAGCTATGCAGCGTGTGTGGGGACA...CTGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCGGCGGAAGAATCCCTTaGAGCCCTCGCAGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: CPSQSVPLLGGSHQASAIGGRIP*SPRSSE
Trigger: TTCTGAGCTGCGAGGGCTGCAAGGGATTCTTCCGCC...GATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp GTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGGGCGGAAGAATCCCTTaGAGCCCTCGCAGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: VPLLGGSHQASAIRPRKQGGRIP*SPRSSE
Trigger: TTCTGAGCTGCGAGGGCTGCAAGGGATTCTTCCGCC...CTGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCGACACTCCTGGCACTTaGGACGCATGTAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: FSVCSTSRRQPPGLSHPADTPGT*DACRCP
Trigger: TGGACACCTACATGCGTCGCAAGTGCCAGGAGTGTC...GGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAGACACTCCTGGCACTTaGGACGCATGTAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: SQSVPLLGGSHQASAIRPDTPGT*DACRCP
Trigger: TGGACACCTACATGCGTCGCAAGTGCCAGGAGTGTC...TGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACACAGCCTGACGGCATTTaGGAAGCCGACACTCCTGGC +
Preference number: 4 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTQPDGI*EADTPG
Trigger: GCCAGGAGTGTCGGCTTCGCAAATGCCGTCAGGCTG...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TGTGCAAAGTGGCCCCCAGGCCCATCCGTTTGTGGGGTCAGCATGATCTTCAGACAGCCTGACGGCATTTaGGAAGCCGACACTCCTGGC +
Preference number: 4 (lower is better)
Translates to: CAKWPPGPSVCGVSMIFRQPDGI*EADTPG
Trigger: GCCAGGAGTGTCGGCTTCGCAAATGCCGTCAGGCTG...TCTGAAGATCATGCTGACCCCACAAACGGATGGGCCTGGGGGCCACTTTGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR GCA 90 bp GCCGCCACTGTGGCAGATGTAGTGCGCTCCCTTGATGACGCTGCGGCGGAAGAAGCCTGTTCCTCCTCTTaGCGCTTCAGTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: AATVADVVRSLDDAAAEEACSSS*RFSFFR
Trigger: CCTGAAGAAACTGAAGCGGCAAGAGGAGGAACAGGC...TTCTTCCGCCGCAGCGTCATCAAGGGAGCGCACTACATCTGCCACAGTGGCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420369.5
CDS-3UTR GCA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACACGCCGGTTACACTGTTaGTGGGCAGCGACGAGCTTC +
Preference number: 4 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTRRLHC*WAATSF
Trigger: GAAGCTCGTCGCTGCCCAGCAACAGTGTAACCGGCG...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TGTGCAAAGTGGCCCCCAGGCCCATCCGTTTGTGGGGTCAGCATGATCTTCAGACGCCGGTTACACTGTTaGTGGGCAGCGACGAGCTTC +
Preference number: 4 (lower is better)
Translates to: CAKWPPGPSVCGVSMIFRRRLHC*WAATSF
Trigger: GAAGCTCGTCGCTGCCCAGCAACAGTGTAACCGGCG...TCTGAAGATCATGCTGACCCCACAAACGGATGGGCCTGGGGGCCACTTTGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR GCA 90 bp CCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGCACGTTGGGCCGGTCTaGAGAGAAGATGCTGATAGC +
Preference number: 4 (lower is better)
Translates to: PFSVCSTSRRQPPGLSHPHVGPV*REDADS
Trigger: GCTATCAGCATCTTCTCTGCAGACCGGCCCAACGTG...CGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCACACGTTGGGCCGGTCTaGAGAGAAGATGCTGATAGC +
Preference number: 4 (lower is better)
Translates to: SQSVPLLGGSHQASAIRPHVGPV*REDADS
Trigger: GCTATCAGCATCTTCTCTGCAGACCGGCCCAACGTG...TGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp ACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTACCTGGAGCTGGTCCTaGACGTTGGGCCGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: TGGSPCPAPRNVCPSQSVTWSWS*TLGRSA
Trigger: TGCAGACCGGCCCAACGTGCAGGACCAGCTCCAGGT...AACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp CCCTTTGACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAACCTGGAGCTGGTCCTaGACGTTGGGCCGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PFDSLLMPREDLLAQLPGTWSWS*TLGRSA
Trigger: TGCAGACCGGCCCAACGTGCAGGACCAGCTCCAGGT...TCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTCAAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR GCA 90 bp CAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGACGCAGTGCAAACACTTaGTCTGAGTGGACGCTGCTC +
Preference number: 4 (lower is better)
Translates to: QSVPLLGGSHQASAIRPRRSANT*SEWTLL
Trigger: GAGCAGCGTCCACTCAGAGCAAGTGTTTGCACTGCG...TCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCCGCAGTGCAAACACTTaGTCTGAGTGGACGCTGCTC +
Preference number: 4 (lower is better)
Translates to: FSVCSTSRRQPPGLSHPARSANT*SEWTLL
Trigger: GAGCAGCGTCCACTCAGAGCAAGTGTTTGCACTGCG...GGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp CCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGACGGGAGGATCTCCTTaGCCAGCTCCCAGGAATGTT +
Preference number: 4 (lower is better)
Translates to: PSQSVPLLGGSHQASAIRTGGSP*PAPRNV
Trigger: AACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGT...CCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp TCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGGCACTGTCCTTCTTATaGTCCTCCGCCACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: SVCSTSRRQPPGLSHPAKALSFL*SSATAR
Trigger: TCTGGCTGTGGCGGAGGAGCATAAGAAGGACAGTGC...CTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407404.5
CDS-3UTR GCA 90 bp TCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAATGGGTGCATCTGCCCTaGTTCTCTTGGGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: SVPLLGGSHQASAIRPRKWVHLP*FSWAPS
Trigger: GGAAGGGGCCCAAGAGAAGCAGGGCAGATGCACCCA...TTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467728.5
CDS-3UTR GCA 90 bp TCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAATGTTTGGGTGCATCTaGCCTGCTTCTCTTGGGCCC +
Preference number: 4 (lower is better)
Translates to: SQSVPLLGGSHQASAIRPMFGCI*PASLGP
Trigger: GGGCCCAAGAGAAGCAGGGCAGATGCACCCAAACAT...TGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467728.5
CDS-3UTR CCA 90 bp CACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTGTACCCCCAGCAGAGTaGGGCATCCTGGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: HGRISLPSSQECLPFSVCVPPAE*GILASS
Trigger: AGAGGAAGCCAGGATGCCCCACTCTGCTGGGGGTAC...ACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGTACCCCCAGCAGAGTaGGGCATCCTGGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTVPPAE*GILASS
Trigger: AGAGGAAGCCAGGATGCCCCACTCTGCTGGGGGTAC...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp TGTGCAAAGTGGCCCCCAGGCCCATCCGTTTGTGGGGTCAGCATGATCTTCAGAGTACCCCCAGCAGAGTaGGGCATCCTGGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: CAKWPPGPSVCGVSMIFRVPPAE*GILASS
Trigger: AGAGGAAGCCAGGATGCCCCACTCTGCTGGGGGTAC...TCTGAAGATCATGCTGACCCCACAAACGGATGGGCCTGGGGGCCACTTTGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR CCA 90 bp TGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCGTGGACGGATCTCTGTaGGTTCTGAAGGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: CPSQSVPLLGGSHQASAIVDGSL*VLKGAL
Trigger: CAGAGCCCCCTTCAGAACCCACAGAGATCCGTCCAC...GATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp GCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTGGACGGATCTCTGTaGGTTCTGAAGGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: ATGGSPCPAPRNVCPSQSVDGSL*VLKGAL
Trigger: CAGAGCCCCCTTCAGAACCCACAGAGATCCGTCCAC...AGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp ACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTGTGTCCATGGGGCAGTaGCCGCCACTGTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: TGGSPCPAPRNVCPSQSVVSMGQ*PPLWQM
Trigger: CATCTGCCACAGTGGCGGCCACTGCCCCATGGACAC...AACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp TGGGGTCAGCATGATCTTCAGACACAGCACAGTGTTAGCGAGGGCTCCACTGCTGTGTCCATGGGGCAGTaGCCGCCACTGTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: WGQHDLQTQHSVSEGSTAVSMGQ*PPLWQM
Trigger: CATCTGCCACAGTGGCGGCCACTGCCCCATGGACAC...AGCAGTGGAGCCCTCGCTAACACTGTGCTGTGTCTGAAGATCATGCTGACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR CCA 90 bp TTGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATGCATGTAGGTGTCCATaGGGCAGTGGCCGCCACTGT +
Preference number: 4 (lower is better)
Translates to: LPFSVCSTSRRQPPGLSHACRCP*GSGRHC
Trigger: ACAGTGGCGGCCACTGCCCCATGGACACCTACATGC...ATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGCATGTAGGTGTCCATaGGGCAGTGGCCGCCACTGT +
Preference number: 4 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTACRCP*GSGRHC
Trigger: ACAGTGGCGGCCACTGCCCCATGGACACCTACATGC...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp TGTGCAAAGTGGCCCCCAGGCCCATCCGTTTGTGGGGTCAGCATGATCTTCAGAGCATGTAGGTGTCCATaGGGCAGTGGCCGCCACTGT +
Preference number: 4 (lower is better)
Translates to: CAKWPPGPSVCGVSMIFRACRCP*GSGRHC
Trigger: ACAGTGGCGGCCACTGCCCCATGGACACCTACATGC...TCTGAAGATCATGCTGACCCCACAAACGGATGGGCCTGGGGGCCACTTTGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR CCA 90 bp CCCCCAGGCCCATCCGTTTGTGGGGTCAGCATGATCTTCAGACACAGCACAGTGCGGTTACACTGTTGCTaGGCAGCGACGAGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: PPGPSVCGVSMIFRHSTVRLHCC*AATSFS
Trigger: CGAGAAGCTCGTCGCTGCCCAGCAACAGTGTAACCG...CACTGTGCTGTGTCTGAAGATCATGCTGACCCCACAAACGGATGGGCCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR CCA 90 bp GACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTCGGGCCTCCCGGCTATaGGGATCTGGTGCCATGGGC +
Preference number: 4 (lower is better)
Translates to: DSLLMPREDLLAQLPGMFRASRL*GSGAMG
Trigger: GCCCATGGCACCAGATCCCCATAGCCGGGAGGCCCG...AAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR CCA 90 bp GTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAATGCAGCCTCTCTACCTaGAGCTGGTCCTGCACGTTG +
Preference number: 4 (lower is better)
Translates to: VCSTSRRQPPGLSHPAKKCSLST*SWSCTL
Trigger: CAACGTGCAGGACCAGCTCCAGGTAGAGAGGCTGCA...TTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp TGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCTGCAGCCTCTCTACCTaGAGCTGGTCCTGCACGTTG +
Preference number: 4 (lower is better)
Translates to: CPSQSVPLLGGSHQASAICSLST*SWSCTL
Trigger: CAACGTGCAGGACCAGCTCCAGGTAGAGAGGCTGCA...GATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp TGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCATGGGGATGGTGGATaGAGACGTAGGCATGCAGGG +
Preference number: 4 (lower is better)
Translates to: CPSQSVPLLGGSHQASAIHGDGG*RRRHAG
Trigger: CCCTGCATGCCTACGTCTCCATCCACCATCCCCATG...GATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp GTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGCATGGGGATGGTGGATaGAGACGTAGGCATGCAGGG +
Preference number: 4 (lower is better)
Translates to: VPLLGGSHQASAIRPRKQHGDGG*RRRHAG
Trigger: CCCTGCATGCCTACGTCTCCATCCACCATCCCCATG...CTGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp GTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGAACACTTGCTCTGAGTaGACGCTGCTCAGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: VPLLGGSHQASAIRPRKQNTCSE*TLLRVR
Trigger: CCGGACCCTGAGCAGCGTCCACTCAGAGCAAGTGTT...CTGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp GTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAAACACTTGCTCTGAGTaGACGCTGCTCAGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: VCSTSRRQPPGLSHPAKKNTCSE*TLLRVR
Trigger: CCGGACCCTGAGCAGCGTCCACTCAGAGCAAGTGTT...TTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp CCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGCTCAGAGAGCAGCGGTaGGAGCTTTTTGTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PFSVCSTSRRQPPGLSHPLREQR*ELFVLQ
Trigger: CTGCAGGACAAAAAGCTCCCACCGCTGCTCTCTGAG...CGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp TCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCACTCAGAGAGCAGCGGTaGGAGCTTTTTGTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SQSVPLLGGSHQASAIRPLREQR*ELFVLQ
Trigger: CTGCAGGACAAAAAGCTCCCACCGCTGCTCTCTGAG...TGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp ACTGTGGCAGATGTAGTGCGCTCCCTTGATGACGCTGCGGCGGAAGAATCCCTTGTCCAGAAGTCTCGGTaGCCAGCCAGTGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TVADVVRSLDDAAAEESLVQKSR*PASELE
Trigger: CTCCAGCTCACTGGCTGGCCACCGAGACTTCTGGAC...AAGGGATTCTTCCGCCGCAGCGTCATCAAGGGAGCGCACTACATCTGCCACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420369.5
CDS-3UTR CCA 90 bp TCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACTGGAGCCCCCTTGCTaGGAGAAGAGGATGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SVPLLGGSHQASAIRPRKLEPPC*EKRMVQ
Trigger: CTGCACCATCCTCTTCTCCCAGCAAGGGGGCTCCAG...TTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
CDS-3UTR CCA 90 bp ACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTGGCCACCAGACTTCCTaGGTGGGCAGTCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TGGSPCPAPRNVCPSQSVGHQTS*VGSLWS
Trigger: GCTCCAGAGACTGCCCACCCAGGAAGTCTGGTGGCC...AACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
CDS-3UTR CCA 90 bp GCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGGATGGGCAGGGCTCTaGAGAACCCTGTGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: ATGGSPCPAPRNVCPSQSGWAGL*RTLCKV
Trigger: CACTTTGCACAGGGTTCTCCAGAGCCCTGCCCATCC...AGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR CCA 90 bp TCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGCCAGCAGGGAATGTTTaGGTGCATCTGCCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SVCSTSRRQPPGLSHPAKPAGNV*VHLPCF
Trigger: GAAGCAGGGCAGATGCACCCAAACATTCCCTGCTGG...CTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467728.5
CDS-3UTR TCA 90 bp TCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAAGCGGATCTGTTCTTCTaGCAGGACACACTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: SVPLLGGSHQASAIRPRKADLFF*QDTLLP
Trigger: CGGGAGGAGTGTGTCCTGTCAGAAGAACAGATCCGC...TTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR TCA 90 bp TTGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATGCGGATCTGTTCTTCTaGCAGGACACACTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: LPFSVCSTSRRQPPGLSHADLFF*QDTLLP
Trigger: CGGGAGGAGTGTGTCCTGTCAGAAGAACAGATCCGC...ATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR TCA 90 bp TCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAAGGCAAGGATGTGGCATaGGCCTGTTCCTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: SVPLLGGSHQASAIRPRKGKDVA*ACSSSC
Trigger: GCAAGAGGAGGAACAGGCTCATGCCACATCCTTGCC...TTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR TCA 90 bp TTGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATGGCAAGGATGTGGCATaGGCCTGTTCCTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: LPFSVCSTSRRQPPGLSHGKDVA*ACSSSC
Trigger: GCAAGAGGAGGAACAGGCTCATGCCACATCCTTGCC...ATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR TCA 90 bp CGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTCCCCCTGAGCCCCTCATaGGTTATTCTGGGACCCAGA +
Preference number: 4 (lower is better)
Translates to: REDLLAQLPGMFALLSLFPLSPS*VILGPR
Trigger: TCTGGGTCCCAGAATAACTCATGAGGGGCTCAGGGG...GAACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467728.5
CDS-3UTR TCA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAACTCCAACCCTCCTCTaGCTCCAAAGTCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTTPTLL*LQSLGS
Trigger: GGAGCCCAGACTTTGGAGTCAGAGGAGGGTTGGAGT...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467728.5
CDS-3UTR GCA 90 bp TTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAATCCCACCGAGACTaGGCCTTTTCCCCGCACCCC +
Preference number: 4 (lower is better)
Translates to: FNATGGSPCPAPRNVCPSQSHRD*AFSPHP
Trigger: GGGGTGCGGGGAAAAGGCGCAGTCTCGGTGGGATTG...AGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405576.5
CDS-3UTR GCA 90 bp TTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCTGGGCCTGGCTGCTTaGATCCTGTGCGCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: FNATGGSPCPAPRNVCPSLGLAA*ILCAWL
Trigger: AAGCCAGGCGCACAGGATGCAAGCAGCCAGGCCCAG...AGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp CGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTCTGTCCCCACACACGCTaGATAGCTCGTTCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: REDLLAQLPGMFALLSLFCPHTR*IARSPA
Trigger: TGCTGGGGAACGAGCTATGCAGCGTGTGTGGGGACA...GAACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp ACTGTGGCAGATGTAGTGCGCTCCCTTGATGACGCTGCGGCGGAAGAATCCCTTTGTCCCCACACACGCTaGATAGCTCGTTCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: TVADVVRSLDDAAAEESLCPHTR*IARSPA
Trigger: TGCTGGGGAACGAGCTATGCAGCGTGTGTGGGGACA...AAGGGATTCTTCCGCCGCAGCGTCATCAAGGGAGCGCACTACATCTGCCACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420369.5
CDS-3UTR GCA 90 bp TTGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATTGTCCCCACACACGCTaGATAGCTCGTTCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LPFSVCSTSRRQPPGLSHCPHTR*IARSPA
Trigger: TGCTGGGGAACGAGCTATGCAGCGTGTGTGGGGACA...ATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACATGTCCCCACACACGCTaGATAGCTCGTTCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTCPHTR*IARSPA
Trigger: TGCTGGGGAACGAGCTATGCAGCGTGTGTGGGGACA...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCGACACTCCTGGCACTTaGGACGCATGTAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: CPSQSVPLLGGSHQASAIDTPGT*DACRCP
Trigger: TGGACACCTACATGCGTCGCAAGTGCCAGGAGTGTC...GATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp CCCTTTGACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGACAGCCTGACGGCATTTaGGAAGCCGACACTCCTGGC +
Preference number: 4 (lower is better)
Translates to: PFDSLLMPREDLLAQLPGQPDGI*EADTPG
Trigger: GCCAGGAGTGTCGGCTTCGCAAATGCCGTCAGGCTG...TCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTCAAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR GCA 90 bp TTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCGCCTGTTCCTCCTCTTaGCGCTTCAGTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: FSVCSTSRRQPPGLSHPAACSSS*RFSFFR
Trigger: CCTGAAGAAACTGAAGCGGCAAGAGGAGGAACAGGC...GGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp CCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGGCCTGTTCCTCCTCTTaGCGCTTCAGTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PSQSVPLLGGSHQASAIRACSSS*RFSFFR
Trigger: CCTGAAGAAACTGAAGCGGCAAGAGGAGGAACAGGC...CCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp GTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGCACGTTGGGCCGGTCTaGAGAGAAGATGCTGATAGC +
Preference number: 4 (lower is better)
Translates to: VPLLGGSHQASAIRPRKQHVGPV*REDADS
Trigger: GCTATCAGCATCTTCTCTGCAGACCGGCCCAACGTG...CTGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTACCTGGAGCTGGTCCTaGACGTTGGGCCGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: FNATGGSPCPAPRNVCPSTWSWS*TLGRSA
Trigger: TGCAGACCGGCCCAACGTGCAGGACCAGCTCCAGGT...AGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp TTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCGCTTCCACATATGTGTaGTGCAGCCTCTCTACCTGG +
Preference number: 4 (lower is better)
Translates to: FSVCSTSRRQPPGLSHPAASTYV*CSLSTW
Trigger: CCAGGTAGAGAGGCTGCAGCACACATATGTGGAAGC...GGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp GTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAACGCAGTGCAAACACTTaGTCTGAGTGGACGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VCSTSRRQPPGLSHPAKKRSANT*SEWTLL
Trigger: GAGCAGCGTCCACTCAGAGCAAGTGTTTGCACTGCG...TTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGCAGTGCAAACACTTaGTCTGAGTGGACGCTGCTC +
Preference number: 4 (lower is better)
Translates to: CPSQSVPLLGGSHQASAIRSANT*SEWTLL
Trigger: GAGCAGCGTCCACTCAGAGCAAGTGTTTGCACTGCG...GATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp GCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTCGCAGTGCAAACACTTaGTCTGAGTGGACGCTGCTC +
Preference number: 4 (lower is better)
Translates to: ATGGSPCPAPRNVCPSQSRSANT*SEWTLL
Trigger: GAGCAGCGTCCACTCAGAGCAAGTGTTTGCACTGCG...AGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp GCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTACGGGAGGATCTCCTTaGCCAGCTCCCAGGAATGTT +
Preference number: 4 (lower is better)
Translates to: ATGGSPCPAPRNVCPSQSTGGSP*PAPRNV
Trigger: AACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGT...AGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp ACGCATGTAGGTGTCCATGGGGCAGTGGCCGCCACTGTGGCAGATGTAGTGCGCGGGAGAAGAGGATGGTaGAGTTTCCTGTCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: THVGVHGAVAATVADVVRGRRGW*SFLSRS
Trigger: ACTTCTGGACAGGAAACTGCACCATCCTCTTCTCCC...GCGCACTACATCTGCCACAGTGGCGGCCACTGCCCCATGGACACCTACATGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420369.5
CDS-3UTR GCA 90 bp TTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCTCTGGAGAACCCTGTaGAAAGTGGCCCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: FNATGGSPCPAPRNVCPSLWRTL*KVAPRP
Trigger: GGGCCTGGGGGCCACTTTGCACAGGGTTCTCCAGAG...AGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR GCA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACATGGGACCCAGAGTCCTaGTCCTGTCCCAAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTWDPES*SCPKLP
Trigger: TGGAAGCTTGGGACAGGAGCAGGACTCTGGGTCCCA...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467728.5
CDS-3UTR CCA 90 bp TCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTGCATCCTGTGCGCCTaGCTTCCACAGCTCCACCGC +
Preference number: 4 (lower is better)
Translates to: SFNATGGSPCPAPRNVCPCILCA*LPQLHR
Trigger: GCGGTGGAGCTGTGGAAGCCAGGCGCACAGGATGCA...AGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR CCA 90 bp TCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAAGTGGACGGATCTCTGTaGGTTCTGAAGGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SVPLLGGSHQASAIRPRKVDGSL*VLKGAL
Trigger: CAGAGCCCCCTTCAGAACCCACAGAGATCCGTCCAC...TTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp ACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTGCATGTAGGTGTCCATaGGGCAGTGGCCGCCACTGT +
Preference number: 4 (lower is better)
Translates to: TGGSPCPAPRNVCPSQSVACRCP*GSGRHC
Trigger: ACAGTGGCGGCCACTGCCCCATGGACACCTACATGC...AACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp TTGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCGGTTACACTGTTGCTaGGCAGCGACGAGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: LPFSVCSTSRRQPPGLSHRLHCC*AATSFS
Trigger: CGAGAAGCTCGTCGCTGCCCAGCAACAGTGTAACCG...ATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp TTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCCGGCTATGGGGATCTaGTGCCATGGGCCAAGGCGT +
Preference number: 4 (lower is better)
Translates to: FNATGGSPCPAPRNVCPSPAMGI*CHGPRR
Trigger: ACGCCTTGGCCCATGGCACCAGATCCCCATAGCCGG...AGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp TCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTCTCTCTACCTGGAGCTaGTCCTGCACGTTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: SFNATGGSPCPAPRNVCPLSTWS*SCTLGR
Trigger: CCGGCCCAACGTGCAGGACCAGCTCCAGGTAGAGAG...AGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR CCA 90 bp CACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTGCAGCCTCTCTACCTaGAGCTGGTCCTGCACGTTG +
Preference number: 4 (lower is better)
Translates to: HGRISLPSSQECLPFSVCCSLST*SWSCTL
Trigger: CAACGTGCAGGACCAGCTCCAGGTAGAGAGGCTGCA...ACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp TCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACATGGGGATGGTGGATaGAGACGTAGGCATGCAGGG +
Preference number: 4 (lower is better)
Translates to: SVPLLGGSHQASAIRPRKHGDGG*RRRHAG
Trigger: CCCTGCATGCCTACGTCTCCATCCACCATCCCCATG...TTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp CGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTCCATGGGGATGGTGGATaGAGACGTAGGCATGCAGGG +
Preference number: 4 (lower is better)
Translates to: REDLLAQLPGMFALLSLFHGDGG*RRRHAG
Trigger: CCCTGCATGCCTACGTCTCCATCCACCATCCCCATG...GAACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp CAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAACATCAGTCGGTCATaGGGATGGTGGATGGAGACG +
Preference number: 4 (lower is better)
Translates to: QSVPLLGGSHQASAIRPRNISRS*GWWMET
Trigger: CGTCTCCATCCACCATCCCCATGACCGACTGATGTT...TCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp TTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAACATCAGTCGGTCATaGGGATGGTGGATGGAGACG +
Preference number: 4 (lower is better)
Translates to: FSVCSTSRRQPPGLSHPANISRS*GWWMET
Trigger: CGTCTCCATCCACCATCCCCATGACCGACTGATGTT...GGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp CACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTAACACTTGCTCTGAGTaGACGCTGCTCAGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: HGRISLPSSQECLPFSVCNTCSE*TLLRVR
Trigger: CCGGACCCTGAGCAGCGTCCACTCAGAGCAAGTGTT...ACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp TCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAAAACACTTGCTCTGAGTaGACGCTGCTCAGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: SVPLLGGSHQASAIRPRKNTCSE*TLLRVR
Trigger: CCGGACCCTGAGCAGCGTCCACTCAGAGCAAGTGTT...TTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp GTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGCTCAGAGAGCAGCGGTaGGAGCTTTTTGTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: VPLLGGSHQASAIRPRKQLREQR*ELFVLQ
Trigger: CTGCAGGACAAAAAGCTCCCACCGCTGCTCTCTGAG...CTGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp GTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAACTCAGAGAGCAGCGGTaGGAGCTTTTTGTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: VCSTSRRQPPGLSHPAKKLREQR*ELFVLQ
Trigger: CTGCAGGACAAAAAGCTCCCACCGCTGCTCTCTGAG...TTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp CCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCTGGGAGAAGAGGATaGTGCAGTTTCCTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: PFSVCSTSRRQPPGLSHPAGRRG*CSFLSR
Trigger: TCTGGACAGGAAACTGCACCATCCTCTTCTCCCAGC...CGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
CDS-3UTR CCA 90 bp TCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTACCAGACTTCCTGGGTaGGCAGTCTCTGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: SFNATGGSPCPAPRNVCPTRLPG*AVSGAP
Trigger: GGGGGCTCCAGAGACTGCCCACCCAGGAAGTCTGGT...AGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
CDS-3UTR CCA 90 bp TTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAGGCCCATCCGTTTGTaGGGTCAGCATGATCTTCAG +
Preference number: 4 (lower is better)
Translates to: FSVCSTSRRQPPGLSHPARPIRL*GQHDLQ
Trigger: CTGAAGATCATGCTGACCCCACAAACGGATGGGCCT...GGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR CCA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGGATGGGCAGGGCTCTaGAGAACCCTGTGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTGWAGL*RTLCKV
Trigger: CACTTTGCACAGGGTTCTCCAGAGCCCTGCCCATCC...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR TCA 90 bp GGTCAGCATGATCTTCAGACACAGCACAGTGTTAGCGAGGGCTCCACTGCTCAGGCGGATCTGTTCTTCTaGCAGGACACACTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: GQHDLQTQHSVSEGSTAQADLFF*QDTLLP
Trigger: CGGGAGGAGTGTGTCCTGTCAGAAGAACAGATCCGC...CTGAGCAGTGGAGCCCTCGCTAACACTGTGCTGTGTCTGAAGATCATGCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR TCA 90 bp TCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAATGCAAACACTTGCTCTaGGTGGACGCTGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: SVPLLGGSHQASAIRPRKCKHLL*VDAAQG
Trigger: ACCCTGAGCAGCGTCCACTCAGAGCAAGTGTTTGCA...TTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR TCA 90 bp TTGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATTGCAAACACTTGCTCTaGGTGGACGCTGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: LPFSVCSTSRRQPPGLSHCKHLL*VDAAQG
Trigger: ACCCTGAGCAGCGTCCACTCAGAGCAAGTGTTTGCA...ATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR TCA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACATGCAAACACTTGCTCTaGGTGGACGCTGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTCKHLL*VDAAQG
Trigger: ACCCTGAGCAGCGTCCACTCAGAGCAAGTGTTTGCA...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR TCA 90 bp CCTCTTGCCGCTTCAGTTTCTTCAGGCGGATCTGTTCTTCTGACAGGACACACTTCGGTGGCCAGCCAGTaGGCTGGAGCTGAGCACAAG +
Preference number: 4 (lower is better)
Translates to: PLAASVSSGGSVLLTGHTSVASQ*AGAEHK
Trigger: CTTGTGCTCAGCTCCAGCTCACTGGCTGGCCACCGA...AGTGTGTCCTGTCAGAAGAACAGATCCGCCTGAAGAAACTGAAGCGGCAAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420369.5
CDS-3UTR TCA 90 bp TTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCTTTGTGGGGTCAGCATaGTCTTCAGACACAGCACAG +
Preference number: 4 (lower is better)
Translates to: FSVCSTSRRQPPGLSHPAFVGSA*SSDTAQ
Trigger: CTGTGCTGTGTCTGAAGATCATGCTGACCCCACAAA...GGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR TCA 90 bp ACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTATTCCTGGGCTCAAGTaGTCCTCTCACCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: TGGSPCPAPRNVCPSQSVIPGLK*SSHLGL
Trigger: GAGGCCCAGGTGAGAGGATCACTTGAGCCCAGGAAT...AACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467728.5
CDS-3UTR GCA 90 bp TCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACGCAGAGTCTTCTTATaGTCCTCCGCCACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: SVPLLGGSHQASAIRPRKRRVFL*SSATAR
Trigger: TCTGGCTGTGGCGGAGGAGCATAAGAAGACTCTGCG...TTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000481889.6
CDS-3UTR GCA 90 bp ACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTGGCGGAAGAATCCCTTaGAGCCCTCGCAGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: TGGSPCPAPRNVCPSQSVGGRIP*SPRSSE
Trigger: TTCTGAGCTGCGAGGGCTGCAAGGGATTCTTCCGCC...AACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGACACTCCTGGCACTTaGGACGCATGTAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTDTPGT*DACRCP
Trigger: TGGACACCTACATGCGTCGCAAGTGCCAGGAGTGTC...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAAGACACTCCTGGCACTTaGGACGCATGTAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: SVPLLGGSHQASAIRPRKDTPGT*DACRCP
Trigger: TGGACACCTACATGCGTCGCAAGTGCCAGGAGTGTC...TTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TTGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATGACACTCCTGGCACTTaGGACGCATGTAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: LPFSVCSTSRRQPPGLSHDTPGT*DACRCP
Trigger: TGGACACCTACATGCGTCGCAAGTGCCAGGAGTGTC...ATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCGCCTGTTCCTCCTCTTaGCGCTTCAGTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: CPSQSVPLLGGSHQASAIACSSS*RFSFFR
Trigger: CCTGAAGAAACTGAAGCGGCAAGAGGAGGAACAGGC...GATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTGCTATGGGGATCTGGTaGCATGGGCCAAGGCGTGAC +
Preference number: 4 (lower is better)
Translates to: SFNATGGSPCPAPRNVCPAMGIW*HGPRRD
Trigger: GTCACGCCTTGGCCCATGGCACCAGATCCCCATAGC...AGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR GCA 90 bp GTGTTAGCGAGGGCTCCACTGCTCAGTAGCCACAAAACTCGCAACCCTTTGACTGCTATGGGGATCTGGTaGCATGGGCCAAGGCGTGAC +
Preference number: 4 (lower is better)
Translates to: VLARAPLLSSHKTRNPLTAMGIW*HGPRRD
Trigger: GTCACGCCTTGGCCCATGGCACCAGATCCCCATAGC...AGTCAAAGGGTTGCGAGTTTTGTGGCTACTGAGCAGTGGAGCCCTCGCTAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR GCA 90 bp TCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGTCGGCATCATTGAGTTaGAGCTCATTCATGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SVCSTSRRQPPGLSHPAKSASLS*SSFMAL
Trigger: CAGGGCCATGAATGAGCTGCAACTCAATGATGCCGA...CTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp CCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGTCGGCATCATTGAGTTaGAGCTCATTCATGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PSQSVPLLGGSHQASAIRSASLS*SSFMAL
Trigger: CAGGGCCATGAATGAGCTGCAACTCAATGATGCCGA...CCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACACGTTGGGCCGGTCTaGAGAGAAGATGCTGATAGC +
Preference number: 4 (lower is better)
Translates to: SVPLLGGSHQASAIRPRKHVGPV*REDADS
Trigger: GCTATCAGCATCTTCTCTGCAGACCGGCCCAACGTG...TTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TTGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCACGTTGGGCCGGTCTaGAGAGAAGATGCTGATAGC +
Preference number: 4 (lower is better)
Translates to: LPFSVCSTSRRQPPGLSHHVGPV*REDADS
Trigger: GCTATCAGCATCTTCTCTGCAGACCGGCCCAACGTG...ATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCGCTTCCACATATGTGTaGTGCAGCCTCTCTACCTGG +
Preference number: 4 (lower is better)
Translates to: CPSQSVPLLGGSHQASAIASTYV*CSLSTW
Trigger: CCAGGTAGAGAGGCTGCAGCACACATATGTGGAAGC...GATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp GTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGGCTTCCACATATGTGTaGTGCAGCCTCTCTACCTGG +
Preference number: 4 (lower is better)
Translates to: VPLLGGSHQASAIRPRKQASTYV*CSLSTW
Trigger: CCAGGTAGAGAGGCTGCAGCACACATATGTGGAAGC...CTGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACGCAGTGCAAACACTTaGTCTGAGTGGACGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SVPLLGGSHQASAIRPRKRSANT*SEWTLL
Trigger: GAGCAGCGTCCACTCAGAGCAAGTGTTTGCACTGCG...TTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAGGGAGCTTTTTGTCCTaGAGACGCAGTGCAAACACT +
Preference number: 4 (lower is better)
Translates to: SQSVPLLGGSHQASAIRPGSFLS*RRSANT
Trigger: AGTGTTTGCACTGCGTCTGCAGGACAAAAAGCTCCC...TGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp CCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGGGGAGCTTTTTGTCCTaGAGACGCAGTGCAAACACT +
Preference number: 4 (lower is better)
Translates to: PSQSVPLLGGSHQASAIRGSFLS*RRSANT
Trigger: AGTGTTTGCACTGCGTCTGCAGGACAAAAAGCTCCC...CCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAGCTCCCAGGAATGTTTaGCCTTCTCAGTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: SQSVPLLGGSHQASAIRPAPRNV*PSQSVP
Trigger: TGGAACAGACTGAGAAGGGCAAACATTCCTGGGAGC...TGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCGCTCCCAGGAATGTTTaGCCTTCTCAGTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: FSVCSTSRRQPPGLSHPAAPRNV*PSQSVP
Trigger: TGGAACAGACTGAGAAGGGCAAACATTCCTGGGAGC...GGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp CAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAGCTCCCAGGAATGTTTaGCCTTCTCAGTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: QSVPLLGGSHQASAIRPRAPRNV*PSQSVP
Trigger: TGGAACAGACTGAGAAGGGCAAACATTCCTGGGAGC...TCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp ACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTTCTCTGGAGCCCCCTTaGTGGGAGAAGAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: TGGSPCPAPRNVCPSQSVSLEPP*WEKRMV
Trigger: CACCATCCTCTTCTCCCAGCAAGGGGGCTCCAGAGA...AACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
CDS-3UTR GCA 90 bp GGTCAGCATGATCTTCAGACACAGCACAGTGTTAGCGAGGGCTCCACTGCTCAGTCTCTGGAGCCCCCTTaGTGGGAGAAGAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: GQHDLQTQHSVSEGSTAQSLEPP*WEKRMV
Trigger: CACCATCCTCTTCTCCCAGCAAGGGGGCTCCAGAGA...CTGAGCAGTGGAGCCCTCGCTAACACTGTGCTGTGTCTGAAGATCATGCTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441012.7
CDS-3UTR GCA 90 bp TCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAGATTCTCCTCATCCCTaGTTCCCAGCAGATTTGGCT +
Preference number: 4 (lower is better)
Translates to: SQSVPLLGGSHQASAIRPDSPHP*FPADLA
Trigger: AGCCAAATCTGCTGGGAAGCAGGGATGAGGAGAATC...TGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481889.6
CDS-3UTR CCA 90 bp GCGACGCATGTAGGTGTCCATGGGGCAGTGGCCGCCACTGTGGCAGATGTAGTGCTTTTTCCGCTTTTGTaGACGGATCTCTGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: ATHVGVHGAVAATVADVVLFPLL*TDLCGF
Trigger: GAACCCACAGAGATCCGTCCACAAAAGCGGAAAAAG...CACTACATCTGCCACAGTGGCGGCCACTGCCCCATGGACACCTACATGCGTCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420369.5
CDS-3UTR CCA 90 bp TCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCACTTGCAGCCCTGCTTTaGCAAAGTCTTCCCGGTTAT +
Preference number: 4 (lower is better)
Translates to: SQSVPLLGGSHQASAIRPLAALL*QSLPGY
Trigger: ATAACCGGGAAGACTTTGCCAAAGCAGGGCTGCAAG...TGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp TTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCCTTGCAGCCCTGCTTTaGCAAAGTCTTCCCGGTTAT +
Preference number: 4 (lower is better)
Translates to: FSVCSTSRRQPPGLSHPALAALL*QSLPGY
Trigger: ATAACCGGGAAGACTTTGCCAAAGCAGGGCTGCAAG...GGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp CAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGACTTGCAGCCCTGCTTTaGCAAAGTCTTCCCGGTTAT +
Preference number: 4 (lower is better)
Translates to: QSVPLLGGSHQASAIRPRLAALL*QSLPGY
Trigger: ATAACCGGGAAGACTTTGCCAAAGCAGGGCTGCAAG...TCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp CCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGCTTGCAGCCCTGCTTTaGCAAAGTCTTCCCGGTTAT +
Preference number: 4 (lower is better)
Translates to: PFSVCSTSRRQPPGLSHPLAALL*QSLPGY
Trigger: ATAACCGGGAAGACTTTGCCAAAGCAGGGCTGCAAG...CGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp CCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGGTTGCAGCTCATTCATaGCCCTGGAGAACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: PSQSVPLLGGSHQASAIRVAAHS*PWRTRR
Trigger: TCTTCGAGTTCTCCAGGGCCATGAATGAGCTGCAAC...CCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp TCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGGTTGCAGCTCATTCATaGCCCTGGAGAACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: SVCSTSRRQPPGLSHPAKVAAHS*PWRTRR
Trigger: TCTTCGAGTTCTCCAGGGCCATGAATGAGCTGCAAC...CTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp ACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTTGCAGCCTCTCTACCTaGAGCTGGTCCTGCACGTTG +
Preference number: 4 (lower is better)
Translates to: TGGSPCPAPRNVCPSQSVCSLST*SWSCTL
Trigger: CAACGTGCAGGACCAGCTCCAGGTAGAGAGGCTGCA...AACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp CCCTTTGACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGATGCAGCCTCTCTACCTaGAGCTGGTCCTGCACGTTG +
Preference number: 4 (lower is better)
Translates to: PFDSLLMPREDLLAQLPGCSLST*SWSCTL
Trigger: CAACGTGCAGGACCAGCTCCAGGTAGAGAGGCTGCA...TCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTCAAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR CCA 90 bp GTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAAACATCAGTCGGTCATaGGGATGGTGGATGGAGACG +
Preference number: 4 (lower is better)
Translates to: VCSTSRRQPPGLSHPAKKNISRS*GWWMET
Trigger: CGTCTCCATCCACCATCCCCATGACCGACTGATGTT...TTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp TGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCAACATCAGTCGGTCATaGGGATGGTGGATGGAGACG +
Preference number: 4 (lower is better)
Translates to: CPSQSVPLLGGSHQASAINISRS*GWWMET
Trigger: CGTCTCCATCCACCATCCCCATGACCGACTGATGTT...GATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp GCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTAACATCAGTCGGTCATaGGGATGGTGGATGGAGACG +
Preference number: 4 (lower is better)
Translates to: ATGGSPCPAPRNVCPSQSNISRS*GWWMET
Trigger: CGTCTCCATCCACCATCCCCATGACCGACTGATGTT...AGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp ACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTAACACTTGCTCTGAGTaGACGCTGCTCAGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: TGGSPCPAPRNVCPSQSVNTCSE*TLLRVR
Trigger: CCGGACCCTGAGCAGCGTCCACTCAGAGCAAGTGTT...AACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp TTGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCTCAGAGAGCAGCGGTaGGAGCTTTTTGTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LPFSVCSTSRRQPPGLSHLREQR*ELFVLQ
Trigger: CTGCAGGACAAAAAGCTCCCACCGCTGCTCTCTGAG...ATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp CGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTCCTCAGAGAGCAGCGGTaGGAGCTTTTTGTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: REDLLAQLPGMFALLSLFLREQR*ELFVLQ
Trigger: CTGCAGGACAAAAAGCTCCCACCGCTGCTCTCTGAG...GAACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp TCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACTCAGAGAGCAGCGGTaGGAGCTTTTTGTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SVPLLGGSHQASAIRPRKLREQR*ELFVLQ
Trigger: CTGCAGGACAAAAAGCTCCCACCGCTGCTCTCTGAG...TTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp TGGCATGAGCCTGTTCCTCCTCTTGCCGCTTCAGTTTCTTCAGGCGGATCTGTTCTGGAGCCCCCTTGCTaGGAGAAGAGGATGGTGCAG +
Preference number: 4 (lower is better)
Translates to: WHEPVPPLAASVSSGGSVLEPPC*EKRMVQ
Trigger: CTGCACCATCCTCTTCTCCCAGCAAGGGGGCTCCAG...AACAGATCCGCCTGAAGAAACTGAAGCGGCAAGAGGAGGAACAGGCTCATGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420369.5
CDS-3UTR CCA 90 bp TTTGACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTGGGTGGGCAGTCTCTaGAGCCCCCTTGCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: FDSLLMPREDLLAQLPGMWVGSL*SPLAGR
Trigger: TCTCCCAGCAAGGGGGCTCCAGAGACTGCCCACCCA...CATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
CDS-3UTR CCA 90 bp TTTGACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGACCAGACTTCCTGGGTaGGCAGTCTCTGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: FDSLLMPREDLLAQLPGMTRLPG*AVSGAP
Trigger: GGGGGCTCCAGAGACTGCCCACCCAGGAAGTCTGGT...CATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
CDS-3UTR CCA 90 bp GTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAACTCTTCCTGGAGCCCTaGTCATTACCAAGGCACTGT +
Preference number: 4 (lower is better)
Translates to: VCSTSRRQPPGLSHPAKKLFLEP*SLPRHC
Trigger: ACAGTGCCTTGGTAATGACCAGGGCTCCAGGAAGAG...TTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
CDS-3UTR CCA 90 bp GTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGCTCTTCCTGGAGCCCTaGTCATTACCAAGGCACTGT +
Preference number: 4 (lower is better)
Translates to: VPLLGGSHQASAIRPRKQLFLEP*SLPRHC
Trigger: ACAGTGCCTTGGTAATGACCAGGGCTCCAGGAAGAG...CTGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
CDS-3UTR CCA 90 bp TTGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATGCTTCCCAGCAGATTTaGCTCTCCCAGCTCGATGTC +
Preference number: 4 (lower is better)
Translates to: LPFSVCSTSRRQPPGLSHASQQI*LSQLDV
Trigger: GACATCGAGCTGGGAGAGCCAAATCTGCTGGGAAGC...ATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481889.6
3UTR CAA 72 bp CACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTaGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: HGRISLPSSQEC*PFSVCSTSRRQ
Trigger: CTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR TCA 90 bp GTGTTAGCGAGGGCTCCACTGCTCAGTAGCCACAAAACTCGCAACCCTTTGACTGGCAAGGATGTGGCATaGGCCTGTTCCTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: VLARAPLLSSHKTRNPLTGKDVA*ACSSSC
Trigger: GCAAGAGGAGGAACAGGCTCATGCCACATCCTTGCC...AGTCAAAGGGTTGCGAGTTTTGTGGCTACTGAGCAGTGGAGCCCTCGCTAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR TCA 90 bp TCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCACAAACTCGGCATCATTaGGTTGCAGCTCATTCATGG +
Preference number: 4 (lower is better)
Translates to: SQSVPLLGGSHQASAIRPQTRHH*VAAHSW
Trigger: CCATGAATGAGCTGCAACTCAATGATGCCGAGTTTG...TGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR TCA 90 bp CCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGCAAACTCGGCATCATTaGGTTGCAGCTCATTCATGG +
Preference number: 4 (lower is better)
Translates to: PFSVCSTSRRQPPGLSHPQTRHH*VAAHSW
Trigger: CCATGAATGAGCTGCAACTCAATGATGCCGAGTTTG...CGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR TCA 90 bp ACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTTGCAAACACTTGCTCTaGGTGGACGCTGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: TGGSPCPAPRNVCPSQSVCKHLL*VDAAQG
Trigger: ACCCTGAGCAGCGTCCACTCAGAGCAAGTGTTTGCA...AACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR TCA 90 bp TTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCCTCAAACTACTGGGCTaGAGCAATCAGGTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: FSVCSTSRRQPPGLSHPALKLLG*SNQVSA
Trigger: AGCTGAAACCTGATTGCTTCAGCCCAGTAGTTTGAG...GGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467728.5
CDS-3UTR TCA 90 bp GTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAACACCAAAGACTTCCCTaGAGCTGTACCTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: VCSTSRRQPPGLSHPAKKHQRLP*SCTLAL
Trigger: CAAAGCCAAGGTACAGCTTCAGGGAAGTCTTTGGTG...TTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616973.4
CDS-3UTR GCA 90 bp ACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTCGCAGAGTCTTCTTATaGTCCTCCGCCACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: TGGSPCPAPRNVCPSQSVRRVFL*SSATAR
Trigger: TCTGGCTGTGGCGGAGGAGCATAAGAAGACTCTGCG...AACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405576.5
ENST00000481889.6
CDS-3UTR GCA 90 bp TTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTGGCGGAAGAATCCCTTaGAGCCCTCGCAGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: FNATGGSPCPAPRNVCPSGGRIP*SPRSSE
Trigger: TTCTGAGCTGCGAGGGCTGCAAGGGATTCTTCCGCC...AGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp CCCAGGCCCATCCGTTTGTGGGGTCAGCATGATCTTCAGACACAGCACAGTGTTGACACTCCTGGCACTTaGGACGCATGTAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: PRPIRLWGQHDLQTQHSVDTPGT*DACRCP
Trigger: TGGACACCTACATGCGTCGCAAGTGCCAGGAGTGTC...AACACTGTGCTGTGTCTGAAGATCATGCTGACCCCACAAACGGATGGGCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR GCA 90 bp CATGAGCCTGTTCCTCCTCTTGCCGCTTCAGTTTCTTCAGGCGGATCTGTTCTTCAGCCTGACGGCATTTaGGAAGCCGACACTCCTGGC +
Preference number: 4 (lower is better)
Translates to: HEPVPPLAASVSSGGSVLQPDGI*EADTPG
Trigger: GCCAGGAGTGTCGGCTTCGCAAATGCCGTCAGGCTG...AAGAACAGATCCGCCTGAAGAAACTGAAGCGGCAAGAGGAGGAACAGGCTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420369.5
CDS-3UTR GCA 90 bp CACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTGCCTGTTCCTCCTCTTaGCGCTTCAGTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: HGRISLPSSQECLPFSVCACSSS*RFSFFR
Trigger: CCTGAAGAAACTGAAGCGGCAAGAGGAGGAACAGGC...ACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp CGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTCGCCTGTTCCTCCTCTTaGCGCTTCAGTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: REDLLAQLPGMFALLSLFACSSS*RFSFFR
Trigger: CCTGAAGAAACTGAAGCGGCAAGAGGAGGAACAGGC...GAACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp TCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAAGCCTGTTCCTCCTCTTaGCGCTTCAGTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SVPLLGGSHQASAIRPRKACSSS*RFSFFR
Trigger: CCTGAAGAAACTGAAGCGGCAAGAGGAGGAACAGGC...TTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCAAGTCAACTATCTCCTaGACAGAGACGATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: CPSQSVPLLGGSHQASAIKSTIS*TETMAS
Trigger: GCTGGCCATCGTCTCTGTGCAGGAGATAGTTGACTT...GATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395397.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp GCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTAAGTCAACTATCTCCTaGACAGAGACGATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ATGGSPCPAPRNVCPSQSKSTIS*TETMAS
Trigger: GCTGGCCATCGTCTCTGTGCAGGAGATAGTTGACTT...AGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp GTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGAAGTCAACTATCTCCTaGACAGAGACGATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VPLLGGSHQASAIRPRKQKSTIS*TETMAS
Trigger: GCTGGCCATCGTCTCTGTGCAGGAGATAGTTGACTT...CTGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395397.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp CAAAACTCGCAACCCTTTGACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCTCCTCCCGGCTGAGCTaGAGGAAGCCGGGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: QNSQPFDSLLMPREDLLASSRLS*RKPGSC
Trigger: ACAGCTACCCGGCTTCCTGCAGCTCAGCCGGGAGGA...GGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTCAAAGGGTTGCGAGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR GCA 90 bp GCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTTCGGCATCATTGAGTTaGAGCTCATTCATGGCCCTG +
Preference number: 4 (lower is better)
Translates to: ATGGSPCPAPRNVCPSQSSASLS*SSFMAL
Trigger: CAGGGCCATGAATGAGCTGCAACTCAATGATGCCGA...AGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp TGGGGTCAGCATGATCTTCAGACACAGCACAGTGTTAGCGAGGGCTCCACTGCTCACGTTGGGCCGGTCTaGAGAGAAGATGCTGATAGC +
Preference number: 4 (lower is better)
Translates to: WGQHDLQTQHSVSEGSTAHVGPV*REDADS
Trigger: GCTATCAGCATCTTCTCTGCAGACCGGCCCAACGTG...AGCAGTGGAGCCCTCGCTAACACTGTGCTGTGTCTGAAGATCATGCTGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR GCA 90 bp ACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTCACGTTGGGCCGGTCTaGAGAGAAGATGCTGATAGC +
Preference number: 4 (lower is better)
Translates to: TGGSPCPAPRNVCPSQSVHVGPV*REDADS
Trigger: GCTATCAGCATCTTCTCTGCAGACCGGCCCAACGTG...AACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGCTTCCACATATGTGTaGTGCAGCCTCTCTACCTGG +
Preference number: 4 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTASTYV*CSLSTW
Trigger: CCAGGTAGAGAGGCTGCAGCACACATATGTGGAAGC...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp CCCTTTGACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGACGCAGTGCAAACACTTaGTCTGAGTGGACGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PFDSLLMPREDLLAQLPGRSANT*SEWTLL
Trigger: GAGCAGCGTCCACTCAGAGCAAGTGTTTGCACTGCG...TCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTCAAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR GCA 90 bp GTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGGGGAGCTTTTTGTCCTaGAGACGCAGTGCAAACACT +
Preference number: 4 (lower is better)
Translates to: VPLLGGSHQASAIRPRKQGSFLS*RRSANT
Trigger: AGTGTTTGCACTGCGTCTGCAGGACAAAAAGCTCCC...CTGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp GTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAGGGAGCTTTTTGTCCTaGAGACGCAGTGCAAACACT +
Preference number: 4 (lower is better)
Translates to: VCSTSRRQPPGLSHPAKKGSFLS*RRSANT
Trigger: AGTGTTTGCACTGCGTCTGCAGGACAAAAAGCTCCC...TTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp GCCCCCAGGCCCATCCGTTTGTGGGGTCAGCATGATCTTCAGACACAGCACAGTGGGAGCTTTTTGTCCTaGAGACGCAGTGCAAACACT +
Preference number: 4 (lower is better)
Translates to: APRPIRLWGQHDLQTQHSGSFLS*RRSANT
Trigger: AGTGTTTGCACTGCGTCTGCAGGACAAAAAGCTCCC...ACTGTGCTGTGTCTGAAGATCATGCTGACCCCACAAACGGATGGGCCTGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR GCA 90 bp TCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCACAGAACAGTCATTCGTaGACATCCCAGATCTCAGAG +
Preference number: 4 (lower is better)
Translates to: SQSVPLLGGSHQASAIRPQNSHS*TSQISE
Trigger: CTCTGAGATCTGGGATGTGCACGAATGACTGTTCTG...TGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp GTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGGCTCCCAGGAATGTTTaGCCTTCTCAGTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: VPLLGGSHQASAIRPRKQAPRNV*PSQSVP
Trigger: TGGAACAGACTGAGAAGGGCAAACATTCCTGGGAGC...CTGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCGCTCCCAGGAATGTTTaGCCTTCTCAGTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: CPSQSVPLLGGSHQASAIAPRNV*PSQSVP
Trigger: TGGAACAGACTGAGAAGGGCAAACATTCCTGGGAGC...GATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp GGTCAGCATGATCTTCAGACACAGCACAGTGTTAGCGAGGGCTCCACTGCTCAGACGGGAGGATCTCCTTaGCCAGCTCCCAGGAATGTT +
Preference number: 4 (lower is better)
Translates to: GQHDLQTQHSVSEGSTAQTGGSP*PAPRNV
Trigger: AACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGT...CTGAGCAGTGGAGCCCTCGCTAACACTGTGCTGTGTCTGAAGATCATGCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR CCA 90 bp GACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGTACCCCCAGCAGAGTaGGGCATCCTGGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: DSLLMPREDLLAQLPGMFVPPAE*GILASS
Trigger: AGAGGAAGCCAGGATGCCCCACTCTGCTGGGGGTAC...AAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR CCA 90 bp GCCTGTTCCTCCTCTTGCCGCTTCAGTTTCTTCAGGCGGATCTGTTCTTCTGACGTGGACGGATCTCTGTaGGTTCTGAAGGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: ACSSSCRFSFFRRICSSDVDGSL*VLKGAL
Trigger: CAGAGCCCCCTTCAGAACCCACAGAGATCCGTCCAC...GTCAGAAGAACAGATCCGCCTGAAGAAACTGAAGCGGCAAGAGGAGGAACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420369.5
CDS-3UTR CCA 90 bp TTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCGGTTACACTGTTGCTaGGCAGCGACGAGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: FNATGGSPCPAPRNVCPSRLHCC*AATSFS
Trigger: CGAGAAGCTCGTCGCTGCCCAGCAACAGTGTAACCG...AGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp TGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCGTTGCAGCTCATTCATaGCCCTGGAGAACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: CPSQSVPLLGGSHQASAIVAAHS*PWRTRR
Trigger: TCTTCGAGTTCTCCAGGGCCATGAATGAGCTGCAAC...GATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp GTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGGTTGCAGCTCATTCATaGCCCTGGAGAACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: VPLLGGSHQASAIRPRKQVAAHS*PWRTRR
Trigger: TCTTCGAGTTCTCCAGGGCCATGAATGAGCTGCAAC...CTGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp TTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTTGCAGCCTCTCTACCTaGAGCTGGTCCTGCACGTTG +
Preference number: 4 (lower is better)
Translates to: FNATGGSPCPAPRNVCPSCSLST*SWSCTL
Trigger: CAACGTGCAGGACCAGCTCCAGGTAGAGAGGCTGCA...AGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp TCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTCATGGGGATGGTGGATaGAGACGTAGGCATGCAGGG +
Preference number: 4 (lower is better)
Translates to: SFNATGGSPCPAPRNVCPHGDGG*RRRHAG
Trigger: CCCTGCATGCCTACGTCTCCATCCACCATCCCCATG...AGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR CCA 90 bp TTGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATAACATCAGTCGGTCATaGGGATGGTGGATGGAGACG +
Preference number: 4 (lower is better)
Translates to: LPFSVCSTSRRQPPGLSHNISRS*GWWMET
Trigger: CGTCTCCATCCACCATCCCCATGACCGACTGATGTT...ATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp TCTTCAGGCGGATCTGTTCTTCTGACAGGACACACTCCTCCCGCATGCCAGCCTGCTGGGAGAAGAGGATaGTGCAGTTTCCTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: SSGGSVLLTGHTPPACQPAGRRG*CSFLSR
Trigger: TCTGGACAGGAAACTGCACCATCCTCTTCTCCCAGC...AGGCTGGCATGCGGGAGGAGTGTGTCCTGTCAGAAGAACAGATCCGCCTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420369.5
CDS-3UTR CCA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACACTCTTCCTGGAGCCCTaGTCATTACCAAGGCACTGT +
Preference number: 4 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTLFLEP*SLPRHC
Trigger: ACAGTGCCTTGGTAATGACCAGGGCTCCAGGAAGAG...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
CDS-3UTR CCA 90 bp TCTTCAGGCGGATCTGTTCTTCTGACAGGACACACTCCTCCCGCATGCCAGCCTCTCTTCCTGGAGCCCTaGTCATTACCAAGGCACTGT +
Preference number: 4 (lower is better)
Translates to: SSGGSVLLTGHTPPACQPLFLEP*SLPRHC
Trigger: ACAGTGCCTTGGTAATGACCAGGGCTCCAGGAAGAG...AGGCTGGCATGCGGGAGGAGTGTGTCCTGTCAGAAGAACAGATCCGCCTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420369.5
CDS-3UTR CCA 90 bp GGGGCTGGAGTGTATGCATTTCAGAGATCAGATAAAACTCTTCAAAGCCAGAGCCAGACTGGGGAGGACTaGGCGGGTGCCTGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: GAGVYAFQRSDKTLQSQSQTGED*AGACKG
Trigger: GCCCTTGCAGGCACCCGCCCAGTCCTCCCCAGTCTG...GCTCTGGCTTTGAAGAGTTTTATCTGATCTCTGAAATGCATACACTCCAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419652.5
CDS-3UTR CCA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAAGGCCCATCCGTTTGTaGGGTCAGCATGATCTTCAG +
Preference number: 4 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTRPIRL*GQHDLQ
Trigger: CTGAAGATCATGCTGACCCCACAAACGGATGGGCCT...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR CCA 90 bp TTTGACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTCTGACTCCAAAGTCTaGGCTCCCAGCCACCGTGCC +
Preference number: 4 (lower is better)
Translates to: FDSLLMPREDLLAQLPGMSDSKV*APSHRA
Trigger: GGCACGGTGGCTGGGAGCCCAGACTTTGGAGTCAGA...CATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467728.5
CDS-3UTR TCA 90 bp GACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCGGATCTGTTCTTCTaGCAGGACACACTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: DSLLMPREDLLAQLPGMFADLFF*QDTLLP
Trigger: CGGGAGGAGTGTGTCCTGTCAGAAGAACAGATCCGC...AAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR TCA 90 bp TTTGACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGGGCAAGGATGTGGCATaGGCCTGTTCCTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: FDSLLMPREDLLAQLPGMGKDVA*ACSSSC
Trigger: GCAAGAGGAGGAACAGGCTCATGCCACATCCTTGCC...CATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR TCA 90 bp TGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCAAACTCGGCATCATTaGGTTGCAGCTCATTCATGG +
Preference number: 4 (lower is better)
Translates to: CPSQSVPLLGGSHQASAIQTRHH*VAAHSW
Trigger: CCATGAATGAGCTGCAACTCAATGATGCCGAGTTTG...GATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR TCA 90 bp GTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAACAAACTCGGCATCATTaGGTTGCAGCTCATTCATGG +
Preference number: 4 (lower is better)
Translates to: VCSTSRRQPPGLSHPAKKQTRHH*VAAHSW
Trigger: CCATGAATGAGCTGCAACTCAATGATGCCGAGTTTG...TTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR TCA 90 bp TTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTTGCAAACACTTGCTCTaGGTGGACGCTGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: FNATGGSPCPAPRNVCPSCKHLL*VDAAQG
Trigger: ACCCTGAGCAGCGTCCACTCAGAGCAAGTGTTTGCA...AGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR TCA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGCTCACTCCACCCAGTaGAACACGCTGCTTATTAGA +
Preference number: 4 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTAHSTQ*NTLLIR
Trigger: TCTAATAAGCAGCGTGTTTCACTGGGTGGAGTGAGC...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467728.5
CDS-3UTR GCA 90 bp ATCTTCAGACACAGCACAGTGTTAGCGAGGGCTCCACTGCTCAGTAGCCACAAATGTCCCCACACACGCTaGATAGCTCGTTCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: IFRHSTVLARAPLLSSHKCPHTR*IARSPA
Trigger: TGCTGGGGAACGAGCTATGCAGCGTGTGTGGGGACA...TTTGTGGCTACTGAGCAGTGGAGCCCTCGCTAACACTGTGCTGTGTCTGAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR GCA 90 bp TTTGACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGGGCGGAAGAATCCCTTaGAGCCCTCGCAGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: FDSLLMPREDLLAQLPGMGGRIP*SPRSSE
Trigger: TTCTGAGCTGCGAGGGCTGCAAGGGATTCTTCCGCC...CATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR GCA 90 bp TCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGTTGATGAATTCCACTTaGAGCCCTGCTTTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: SVCSTSRRQPPGLSHPAKLMNST*SPALAK
Trigger: CTTTGCCAAAGCAGGGCTGCAAGTGGAATTCATCAA...CTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp CCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGTTGATGAATTCCACTTaGAGCCCTGCTTTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: PSQSVPLLGGSHQASAIRLMNST*SPALAK
Trigger: CTTTGCCAAAGCAGGGCTGCAAGTGGAATTCATCAA...CCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp CAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGATTGATGAATTCCACTTaGAGCCCTGCTTTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: QSVPLLGGSHQASAIRPRLMNST*SPALAK
Trigger: CTTTGCCAAAGCAGGGCTGCAAGTGGAATTCATCAA...TCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCATTGATGAATTCCACTTaGAGCCCTGCTTTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: SQSVPLLGGSHQASAIRPLMNST*SPALAK
Trigger: CTTTGCCAAAGCAGGGCTGCAAGTGGAATTCATCAA...TGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TTGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATTCGGCATCATTGAGTTaGAGCTCATTCATGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LPFSVCSTSRRQPPGLSHSASLS*SSFMAL
Trigger: CAGGGCCATGAATGAGCTGCAACTCAATGATGCCGA...ATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp GGTCAGCATGATCTTCAGACACAGCACAGTGTTAGCGAGGGCTCCACTGCTCAGGCTTCCACATATGTGTaGTGCAGCCTCTCTACCTGG +
Preference number: 4 (lower is better)
Translates to: GQHDLQTQHSVSEGSTAQASTYV*CSLSTW
Trigger: CCAGGTAGAGAGGCTGCAGCACACATATGTGGAAGC...CTGAGCAGTGGAGCCCTCGCTAACACTGTGCTGTGTCTGAAGATCATGCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR GCA 90 bp TCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAAGGGAGCTTTTTGTCCTaGAGACGCAGTGCAAACACT +
Preference number: 4 (lower is better)
Translates to: SVPLLGGSHQASAIRPRKGSFLS*RRSANT
Trigger: AGTGTTTGCACTGCGTCTGCAGGACAAAAAGCTCCC...TTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp GTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGCAGAACAGTCATTCGTaGACATCCCAGATCTCAGAG +
Preference number: 4 (lower is better)
Translates to: VPLLGGSHQASAIRPRKQQNSHS*TSQISE
Trigger: CTCTGAGATCTGGGATGTGCACGAATGACTGTTCTG...CTGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TTGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATGCTCCCAGGAATGTTTaGCCTTCTCAGTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: LPFSVCSTSRRQPPGLSHAPRNV*PSQSVP
Trigger: TGGAACAGACTGAGAAGGGCAAACATTCCTGGGAGC...ATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTACGGGAGGATCTCCTTaGCCAGCTCCCAGGAATGTT +
Preference number: 4 (lower is better)
Translates to: SFNATGGSPCPAPRNVCPTGGSP*PAPRNV
Trigger: AACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGT...AGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR GCA 90 bp TTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTACGGGAGGATCTCCTTaGCCAGCTCCCAGGAATGTT +
Preference number: 4 (lower is better)
Translates to: FNATGGSPCPAPRNVCPSTGGSP*PAPRNV
Trigger: AACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGT...AGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp CGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTCGGGAGAAGAGGATGGTaGAGTTTCCTGTCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: REDLLAQLPGMFALLSLFGRRGW*SFLSRS
Trigger: ACTTCTGGACAGGAAACTGCACCATCCTCTTCTCCC...GAACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
CDS-3UTR GCA 90 bp GACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTAGAGAACCTCGCTCGTaGCACTTTCCAGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: DSLLMPREDLLAQLPGMFREPRS*HFPGSQ
Trigger: CTGGGACCCTGGAAAGTGGCACGAGCGAGGTTCTCT...AAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467728.5
CDS-3UTR GCA 90 bp GTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAACCCAGTGAAACACGCTaGTTATTAGAGAACCTCGCT +
Preference number: 4 (lower is better)
Translates to: VCSTSRRQPPGLSHPAKKPSETR*LLENLA
Trigger: AGCGAGGTTCTCTAATAAGCAGCGTGTTTCACTGGG...TTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467728.5
CDS-3UTR GCA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAATTGGAGTAAGCCACTaGGCCCAGCCTGTTATAAGG +
Preference number: 4 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTIGVSH*AQPVIR
Trigger: CCTTATAACAGGCTGGGCGCAGTGGCTTACTCCAAT...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467728.5
CDS-3UTR GCA 90 bp CACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTGCTGTACCTTGGCTTTaGCTATGGTCTCCAGTAGCA +
Preference number: 4 (lower is better)
Translates to: HGRISLPSSQECLPFSVCAVPWL*LWSPVA
Trigger: TGCTACTGGAGACCATAGGCAAAGCCAAGGTACAGC...ACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616973.4
CDS-3UTR CCA 90 bp ATCTTCAGACACAGCACAGTGTTAGCGAGGGCTCCACTGCTCAGTAGCCACAAAGTGGACGGATCTCTGTaGGTTCTGAAGGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: IFRHSTVLARAPLLSSHKVDGSL*VLKGAL
Trigger: CAGAGCCCCCTTCAGAACCCACAGAGATCCGTCCAC...TTTGTGGCTACTGAGCAGTGGAGCCCTCGCTAACACTGTGCTGTGTCTGAAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR CCA 90 bp GTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGCTTTTTCCGCTTTTGTaGACGGATCTCTGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: VPLLGGSHQASAIRPRKQLFPLL*TDLCGF
Trigger: GAACCCACAGAGATCCGTCCACAAAAGCGGAAAAAG...CTGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp CAAAACTCGCAACCCTTTGACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCGCATGTAGGTGTCCATaGGGCAGTGGCCGCCACTGT +
Preference number: 4 (lower is better)
Translates to: QNSQPFDSLLMPREDLLAACRCP*GSGRHC
Trigger: ACAGTGGCGGCCACTGCCCCATGGACACCTACATGC...GGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTCAAAGGGTTGCGAGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR CCA 90 bp TTGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCTTGCAGCCCTGCTTTaGCAAAGTCTTCCCGGTTAT +
Preference number: 4 (lower is better)
Translates to: LPFSVCSTSRRQPPGLSHLAALL*QSLPGY
Trigger: ATAACCGGGAAGACTTTGCCAAAGCAGGGCTGCAAG...ATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACACTTGCAGCCCTGCTTTaGCAAAGTCTTCCCGGTTAT +
Preference number: 4 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTLAALL*QSLPGY
Trigger: ATAACCGGGAAGACTTTGCCAAAGCAGGGCTGCAAG...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp TCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAAGTTGCAGCTCATTCATaGCCCTGGAGAACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: SVPLLGGSHQASAIRPRKVAAHS*PWRTRR
Trigger: TCTTCGAGTTCTCCAGGGCCATGAATGAGCTGCAAC...TTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp CACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTGTTGCAGCTCATTCATaGCCCTGGAGAACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: HGRISLPSSQECLPFSVCVAAHS*PWRTRR
Trigger: TCTTCGAGTTCTCCAGGGCCATGAATGAGCTGCAAC...ACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGTTGCAGCTCATTCATaGCCCTGGAGAACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTVAAHS*PWRTRR
Trigger: TCTTCGAGTTCTCCAGGGCCATGAATGAGCTGCAAC...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CCA 90 bp GACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTTGCAGCCTCTCTACCTaGAGCTGGTCCTGCACGTTG +
Preference number: 4 (lower is better)
Translates to: DSLLMPREDLLAQLPGMFCSLST*SWSCTL
Trigger: CAACGTGCAGGACCAGCTCCAGGTAGAGAGGCTGCA...AAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR CCA 90 bp CCCTTTGACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAGCTGGGAGAAGAGGATaGTGCAGTTTCCTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: PFDSLLMPREDLLAQLPGAGRRG*CSFLSR
Trigger: TCTGGACAGGAAACTGCACCATCCTCTTCTCCCAGC...TCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTCAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000467728.5
CDS-3UTR CCA 90 bp GTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGAAGGACATCTCTTCCTaGAGCCCTGGTCATTACCAA +
Preference number: 4 (lower is better)
Translates to: VPLLGGSHQASAIRPRKQKDISS*SPGHYQ
Trigger: TTGGTAATGACCAGGGCTCCAGGAAGAGATGTCCTT...CTGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
CDS-3UTR TCA 90 bp TCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAAACTCGGCATCATTaGGTTGCAGCTCATTCATGG +
Preference number: 4 (lower is better)
Translates to: SVPLLGGSHQASAIRPRKQTRHH*VAAHSW
Trigger: CCATGAATGAGCTGCAACTCAATGATGCCGAGTTTG...TTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR TCA 90 bp CGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTCCAAACTCGGCATCATTaGGTTGCAGCTCATTCATGG +
Preference number: 4 (lower is better)
Translates to: REDLLAQLPGMFALLSLFQTRHH*VAAHSW
Trigger: CCATGAATGAGCTGCAACTCAATGATGCCGAGTTTG...GAACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR TCA 90 bp ATCTTCAGACACAGCACAGTGTTAGCGAGGGCTCCACTGCTCAGTAGCCACAAATGCAAACACTTGCTCTaGGTGGACGCTGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: IFRHSTVLARAPLLSSHKCKHLL*VDAAQG
Trigger: ACCCTGAGCAGCGTCCACTCAGAGCAAGTGTTTGCA...TTTGTGGCTACTGAGCAGTGGAGCCCTCGCTAACACTGTGCTGTGTCTGAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR TCA 90 bp GACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTCCAGAAGCATCACCGTaGCTCGAAGCCGGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: DSLLMPREDLLAQLPGMFPEASP*LEAGQK
Trigger: TTTCTGACCGGCTTCGAGTCACGGTGATGCTTCTGG...AAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405576.5
ENST00000405853.7
CDS-3UTR TCA 90 bp CACAGCTCCACCGCAGAGTATCTCAGGACCTTAAATGAAGATGTTAATCCTTGTGAACCAGGGGAGAGGTaGTCTGGGCGGGAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: HSSTAEYLRTLNEDVNPCEPGER*SGREAS
Trigger: GCTTGCCTCCCGCCCAGATCACCTCTCCCCTGGTTC...ACAAGGATTAACATCTTCATTTAAGGTCCTGAGATACTCTGCGGTGGAGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419652.5
CDS-3UTR TCA 90 bp CCCAGGCCCATCCGTTTGTGGGGTCAGCATGATCTTCAGACACAGCACAGTGTTTTTGTGGGGTCAGCATaGTCTTCAGACACAGCACAG +
Preference number: 4 (lower is better)
Translates to: PRPIRLWGQHDLQTQHSVFVGSA*SSDTAQ
Trigger: CTGTGCTGTGTCTGAAGATCATGCTGACCCCACAAA...AACACTGTGCTGTGTCTGAAGATCATGCTGACCCCACAAACGGATGGGCCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR GCA 90 bp GACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTCGCAGAGTCTTCTTATaGTCCTCCGCCACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: DSLLMPREDLLAQLPGMFRRVFL*SSATAR
Trigger: TCTGGCTGTGGCGGAGGAGCATAAGAAGACTCTGCG...AAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405576.5
CDS-3UTR GCA 90 bp CATGAGCCTGTTCCTCCTCTTGCCGCTTCAGTTTCTTCAGGCGGATCTGTTCTTGACACTCCTGGCACTTaGGACGCATGTAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: HEPVPPLAASVSSGGSVLDTPGT*DACRCP
Trigger: TGGACACCTACATGCGTCGCAAGTGCCAGGAGTGTC...AAGAACAGATCCGCCTGAAGAAACTGAAGCGGCAAGAGGAGGAACAGGCTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420369.5
CDS-3UTR GCA 90 bp CCCTTTGACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAAAGTCAACTATCTCCTaGACAGAGACGATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PFDSLLMPREDLLAQLPGKSTIS*TETMAS
Trigger: GCTGGCCATCGTCTCTGTGCAGGAGATAGTTGACTT...TCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTCAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR GCA 90 bp GTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAATTGATGAATTCCACTTaGAGCCCTGCTTTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: VCSTSRRQPPGLSHPAKKLMNST*SPALAK
Trigger: CTTTGCCAAAGCAGGGCTGCAAGTGGAATTCATCAA...TTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCTTGATGAATTCCACTTaGAGCCCTGCTTTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: CPSQSVPLLGGSHQASAILMNST*SPALAK
Trigger: CTTTGCCAAAGCAGGGCTGCAAGTGGAATTCATCAA...GATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp GTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGTTGATGAATTCCACTTaGAGCCCTGCTTTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: VPLLGGSHQASAIRPRKQLMNST*SPALAK
Trigger: CTTTGCCAAAGCAGGGCTGCAAGTGGAATTCATCAA...CTGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp ACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTTCGGCATCATTGAGTTaGAGCTCATTCATGGCCCTG +
Preference number: 4 (lower is better)
Translates to: TGGSPCPAPRNVCPSQSVSASLS*SSFMAL
Trigger: CAGGGCCATGAATGAGCTGCAACTCAATGATGCCGA...AACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp TGGGGTCAGCATGATCTTCAGACACAGCACAGTGTTAGCGAGGGCTCCACTGCTTCGGCATCATTGAGTTaGAGCTCATTCATGGCCCTG +
Preference number: 4 (lower is better)
Translates to: WGQHDLQTQHSVSEGSTASASLS*SSFMAL
Trigger: CAGGGCCATGAATGAGCTGCAACTCAATGATGCCGA...AGCAGTGGAGCCCTCGCTAACACTGTGCTGTGTCTGAAGATCATGCTGACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR GCA 90 bp TCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTGCTTCCACATATGTGTaGTGCAGCCTCTCTACCTGG +
Preference number: 4 (lower is better)
Translates to: SFNATGGSPCPAPRNVCPASTYV*CSLSTW
Trigger: CCAGGTAGAGAGGCTGCAGCACACATATGTGGAAGC...AGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR GCA 90 bp CCCTTTGACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAGGGAGCTTTTTGTCCTaGAGACGCAGTGCAAACACT +
Preference number: 4 (lower is better)
Translates to: PFDSLLMPREDLLAQLPGGSFLS*RRSANT
Trigger: AGTGTTTGCACTGCGTCTGCAGGACAAAAAGCTCCC...TCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTCAAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR GCA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACACAGAACAGTCATTCGTaGACATCCCAGATCTCAGAG +
Preference number: 4 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTQNSHS*TSQISE
Trigger: CTCTGAGATCTGGGATGTGCACGAATGACTGTTCTG...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGAACAGTCATTCGTaGACATCCCAGATCTCAGAG +
Preference number: 4 (lower is better)
Translates to: SVPLLGGSHQASAIRPRKQNSHS*TSQISE
Trigger: CTCTGAGATCTGGGATGTGCACGAATGACTGTTCTG...TTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp TTGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCAGAACAGTCATTCGTaGACATCCCAGATCTCAGAG +
Preference number: 4 (lower is better)
Translates to: LPFSVCSTSRRQPPGLSHQNSHS*TSQISE
Trigger: CTCTGAGATCTGGGATGTGCACGAATGACTGTTCTG...ATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR GCA 90 bp ATCTTCAGACACAGCACAGTGTTAGCGAGGGCTCCACTGCTCAGTAGCCACAAAACGGGAGGATCTCCTTaGCCAGCTCCCAGGAATGTT +
Preference number: 4 (lower is better)
Translates to: IFRHSTVLARAPLLSSHKTGGSP*PAPRNV
Trigger: AACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGT...TTTGTGGCTACTGAGCAGTGGAGCCCTCGCTAACACTGTGCTGTGTCTGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR GCA 90 bp CGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTCCAGATAATCCCACTCTaGTTCTCCCTTCATCCCTTG +
Preference number: 4 (lower is better)
Translates to: REDLLAQLPGMFALLSLFQIIPL*FSLHPL
Trigger: CAAGGGATGAAGGGAGAAGCAGAGTGGGATTATCTG...GAACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481889.6
CDS-3UTR CCA 90 bp TTGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCTTTTTCCGCTTTTGTaGACGGATCTCTGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: LPFSVCSTSRRQPPGLSHLFPLL*TDLCGF
Trigger: GAACCCACAGAGATCCGTCCACAAAAGCGGAAAAAG...ATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp CACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTCTTTTTCCGCTTTTGTaGACGGATCTCTGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: HGRISLPSSQECLPFSVCLFPLL*TDLCGF
Trigger: GAACCCACAGAGATCCGTCCACAAAAGCGGAAAAAG...ACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACACTTTTTCCGCTTTTGTaGACGGATCTCTGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTLFPLL*TDLCGF
Trigger: GAACCCACAGAGATCCGTCCACAAAAGCGGAAAAAG...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp TGTGCAAAGTGGCCCCCAGGCCCATCCGTTTGTGGGGTCAGCATGATCTTCAGACTTTTTCCGCTTTTGTaGACGGATCTCTGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: CAKWPPGPSVCGVSMIFRLFPLL*TDLCGF
Trigger: GAACCCACAGAGATCCGTCCACAAAAGCGGAAAAAG...TCTGAAGATCATGCTGACCCCACAAACGGATGGGCCTGGGGGCCACTTTGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR CCA 90 bp CGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTCCTTTTTCCGCTTTTGTaGACGGATCTCTGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: REDLLAQLPGMFALLSLFLFPLL*TDLCGF
Trigger: GAACCCACAGAGATCCGTCCACAAAAGCGGAAAAAG...GAACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp TGTGCAAAGTGGCCCCCAGGCCCATCCGTTTGTGGGGTCAGCATGATCTTCAGAAAGGACATCTCTTCCTaGAGCCCTGGTCATTACCAA +
Preference number: 4 (lower is better)
Translates to: CAKWPPGPSVCGVSMIFRKDISS*SPGHYQ
Trigger: TTGGTAATGACCAGGGCTCCAGGAAGAGATGTCCTT...TCTGAAGATCATGCTGACCCCACAAACGGATGGGCCTGGGGGCCACTTTGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441012.7
CDS-3UTR CCA 90 bp CGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTCCCTTGGCTTTGCCTATaGTCTCCAGTAGCATTGCTT +
Preference number: 4 (lower is better)
Translates to: REDLLAQLPGMFALLSLFPWLCL*SPVALL
Trigger: AAGCAATGCTACTGGAGACCATAGGCAAAGCCAAGG...GAACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616973.4
CDS-3UTR CCA 90 bp CACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTCTTGGTAATGAGAGATaGGCTCACCAAAGACTTCCC +
Preference number: 4 (lower is better)
Translates to: HGRISLPSSQECLPFSVCLGNER*AHQRLP
Trigger: GGGAAGTCTTTGGTGAGCCCATCTCTCATTACCAAG...ACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616973.4
CDS-3UTR TCA 90 bp ACCGCAGAGTATCTCAGGACCTTAAATGAAGATGTTAATCCTTGTCCCTTTGGGTCGGTGGCCAGCCAGTaGGCTGGAGCTGAGCACAAG +
Preference number: 4 (lower is better)
Translates to: TAEYLRTLNEDVNPCPFGSVASQ*AGAEHK
Trigger: CTTGTGCTCAGCTCCAGCTCACTGGCTGGCCACCGA...CCCAAAGGGACAAGGATTAACATCTTCATTTAAGGTCCTGAGATACTCTGCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419652.5
CDS-3UTR TCA 90 bp TTGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATAAACTCGCAACCCTTTaGCTCTCTTTTAATGCCACG +
Preference number: 4 (lower is better)
Translates to: LPFSVCSTSRRQPPGLSHKLATL*LSFNAT
Trigger: CGTGGCATTAAAAGAGAGTCAAAGGGTTGCGAGTTT...ATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR GCA 90 bp AGCATGATCTTCAGACACAGCACAGTGTTAGCGAGGGCTCCACTGCTCAGTAGCAAGTCAACTATCTCCTaGACAGAGACGATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SMIFRHSTVLARAPLLSSKSTIS*TETMAS
Trigger: GCTGGCCATCGTCTCTGTGCAGGAGATAGTTGACTT...GCTACTGAGCAGTGGAGCCCTCGCTAACACTGTGCTGTGTCTGAAGATCATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR GCA 90 bp CGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTCTTGATGAATTCCACTTaGAGCCCTGCTTTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: REDLLAQLPGMFALLSLFLMNST*SPALAK
Trigger: CTTTGCCAAAGCAGGGCTGCAAGTGGAATTCATCAA...GAACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp TTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTTCGGCATCATTGAGTTaGAGCTCATTCATGGCCCTG +
Preference number: 4 (lower is better)
Translates to: FNATGGSPCPAPRNVCPSSASLS*SSFMAL
Trigger: CAGGGCCATGAATGAGCTGCAACTCAATGATGCCGA...AGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp GACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCTTCCACATATGTGTaGTGCAGCCTCTCTACCTGG +
Preference number: 4 (lower is better)
Translates to: DSLLMPREDLLAQLPGMFASTYV*CSLSTW
Trigger: CCAGGTAGAGAGGCTGCAGCACACATATGTGGAAGC...AAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR GCA 90 bp TCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTGGGAGCTTTTTGTCCTaGAGACGCAGTGCAAACACT +
Preference number: 4 (lower is better)
Translates to: SFNATGGSPCPAPRNVCPGSFLS*RRSANT
Trigger: AGTGTTTGCACTGCGTCTGCAGGACAAAAAGCTCCC...AGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR GCA 90 bp TCCACCGCAGAGTATCTCAGGACCTTAAATGAAGATGTTAATCCTTGTCCCTTTGACTGGGCGGGTGCCTaGAAGGGCCAGGCACTGGAA +
Preference number: 4 (lower is better)
Translates to: STAEYLRTLNEDVNPCPFDWAGA*KGQALE
Trigger: TTCCAGTGCCTGGCCCTTGCAGGCACCCGCCCAGTC...AAAGGGACAAGGATTAACATCTTCATTTAAGGTCCTGAGATACTCTGCGGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419652.5
CDS-3UTR GCA 90 bp TCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTACCAAGGCACTGTCCTaGAGGAAGGACCCAGATTAT +
Preference number: 4 (lower is better)
Translates to: SFNATGGSPCPAPRNVCPTKALS*RKDPDY
Trigger: ATAATCTGGGTCCTTCCTGCAGGACAGTGCCTTGGT...AGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467728.5
CDS-3UTR GCA 90 bp TCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTCAGGGAATGTTTGGGTaGATCTGCCCTGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: SFNATGGSPCPAPRNVCPQGMFG*ICPASL
Trigger: AAGAGAAGCAGGGCAGATGCACCCAAACATTCCCTG...AGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467728.5
CDS-3UTR GCA 90 bp TCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGTGCTATTCACAGGTaGAATAATAGGACACTATCG +
Preference number: 4 (lower is better)
Translates to: SQSVPLLGGSHQASAIRPSAIHR*NNRTLS
Trigger: CGATAGTGTCCTATTATTGCACCTGTGAATAGCACT...TGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467728.5
CDS-3UTR CCA 90 bp TTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCTTGCAGCCCTGCTTTaGCAAAGTCTTCCCGGTTAT +
Preference number: 4 (lower is better)
Translates to: FNATGGSPCPAPRNVCPSLAALL*QSLPGY
Trigger: ATAACCGGGAAGACTTTGCCAAAGCAGGGCTGCAAG...AGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp AGCATGATCTTCAGACACAGCACAGTGTTAGCGAGGGCTCCACTGCTCAGTAGCCTTGCAGCCCTGCTTTaGCAAAGTCTTCCCGGTTAT +
Preference number: 4 (lower is better)
Translates to: SMIFRHSTVLARAPLLSSLAALL*QSLPGY
Trigger: ATAACCGGGAAGACTTTGCCAAAGCAGGGCTGCAAG...GCTACTGAGCAGTGGAGCCCTCGCTAACACTGTGCTGTGTCTGAAGATCATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR CCA 90 bp TTCCACAGCTCCACCGCAGAGTATCTCAGGACCTTAAATGAAGATGTTAATCCTACCAGACTTCCTGGGTaGGCAGTCTCTGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: FHSSTAEYLRTLNEDVNPTRLPG*AVSGAP
Trigger: GGGGGCTCCAGAGACTGCCCACCCAGGAAGTCTGGT...AGGATTAACATCTTCATTTAAGGTCCTGAGATACTCTGCGGTGGAGCTGTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419652.5
CDS-3UTR CCA 90 bp TTCCACAGCTCCACCGCAGAGTATCTCAGGACCTTAAATGAAGATGTTAATCCTGGCCACCAGACTTCCTaGGTGGGCAGTCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: FHSSTAEYLRTLNEDVNPGHQTS*VGSLWS
Trigger: GCTCCAGAGACTGCCCACCCAGGAAGTCTGGTGGCC...AGGATTAACATCTTCATTTAAGGTCCTGAGATACTCTGCGGTGGAGCTGTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419652.5
CDS-3UTR CCA 90 bp TTTGACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGCTCTTCCTGGAGCCCTaGTCATTACCAAGGCACTGT +
Preference number: 4 (lower is better)
Translates to: FDSLLMPREDLLAQLPGMLFLEP*SLPRHC
Trigger: ACAGTGCCTTGGTAATGACCAGGGCTCCAGGAAGAG...CATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
CDS-3UTR CCA 90 bp ACCGCAGAGTATCTCAGGACCTTAAATGAAGATGTTAATCCTTGTCCCTTTGGGAGGGGAGAGGTGATCTaGGCGGGAGGCAAGCACGAC +
Preference number: 4 (lower is better)
Translates to: TAEYLRTLNEDVNPCPFGRGEVI*AGGKHD
Trigger: GTCGTGCTTGCCTCCCGCCCAGATCACCTCTCCCCT...CCCAAAGGGACAAGGATTAACATCTTCATTTAAGGTCCTGAGATACTCTGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419652.5
CDS-3UTR CCA 90 bp CACAGCTCCACCGCAGAGTATCTCAGGACCTTAAATGAAGATGTTAATCCTTGTGCAGCAAATCCAGACTaGGGAGGACTGGGCGGGTGC +
Preference number: 4 (lower is better)
Translates to: HSSTAEYLRTLNEDVNPCAANPD*GGLGGC
Trigger: GCACCCGCCCAGTCCTCCCCAGTCTGGATTTGCTGC...ACAAGGATTAACATCTTCATTTAAGGTCCTGAGATACTCTGCGGTGGAGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419652.5
CDS-3UTR CCA 90 bp TTGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCTTTTTCCGCTTTTGTaGACGGATCTCTGGATACAG +
Preference number: 4 (lower is better)
Translates to: LPFSVCSTSRRQPPGLSHLFPLL*TDLWIQ
Trigger: CTGTATCCAGAGATCCGTCCACAAAAGCGGAAAAAG...ATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527949.1
CDS-3UTR GCA 90 bp TTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGAACAGTCATTCGTaGACATCCCAGATCTCAGAG +
Preference number: 4 (lower is better)
Translates to: FNATGGSPCPAPRNVCPSQNSHS*TSQISE
Trigger: CTCTGAGATCTGGGATGTGCACGAATGACTGTTCTG...AGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR GCA 90 bp TTTGACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGGCTCCCAGGAATGTTTaGCCTTCTCAGTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: FDSLLMPREDLLAQLPGMAPRNV*PSQSVP
Trigger: TGGAACAGACTGAGAAGGGCAAACATTCCTGGGAGC...CATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR GCA 90 bp ATCTTCAGACACAGCACAGTGTTAGCGAGGGCTCCACTGCTCAGTAGCCACAAAGCTCCCAGGAATGTTTaGCCTTCTCAGTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: IFRHSTVLARAPLLSSHKAPRNV*PSQSVP
Trigger: TGGAACAGACTGAGAAGGGCAAACATTCCTGGGAGC...TTTGTGGCTACTGAGCAGTGGAGCCCTCGCTAACACTGTGCTGTGTCTGAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR GCA 90 bp TTTGACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGGGGAGAAGAGGATGGTaGAGTTTCCTGTCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: FDSLLMPREDLLAQLPGMGRRGW*SFLSRS
Trigger: ACTTCTGGACAGGAAACTGCACCATCCTCTTCTCCC...CATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
CDS-3UTR CCA 90 bp TCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTCTTTTTCCGCTTTTGTaGACGGATCTCTGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: SFNATGGSPCPAPRNVCPLFPLL*TDLCGF
Trigger: GAACCCACAGAGATCCGTCCACAAAAGCGGAAAAAG...AGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR CCA 90 bp TTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCTTTTTCCGCTTTTGTaGACGGATCTCTGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: FNATGGSPCPAPRNVCPSLFPLL*TDLCGF
Trigger: GAACCCACAGAGATCCGTCCACAAAAGCGGAAAAAG...AGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CCA 90 bp TTTGACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGGTTGCAGCTCATTCATaGCCCTGGAGAACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: FDSLLMPREDLLAQLPGMVAAHS*PWRTRR
Trigger: TCTTCGAGTTCTCCAGGGCCATGAATGAGCTGCAAC...CATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR CCA 90 bp TTCCACAGCTCCACCGCAGAGTATCTCAGGACCTTAAATGAAGATGTTAATCCTGTCCAGAAGTCTCGGTaGCCAGCCAGTGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: FHSSTAEYLRTLNEDVNPVQKSR*PASELE
Trigger: CTCCAGCTCACTGGCTGGCCACCGAGACTTCTGGAC...AGGATTAACATCTTCATTTAAGGTCCTGAGATACTCTGCGGTGGAGCTGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419652.5
CDS-3UTR CCA 90 bp CAAAACTCGCAACCCTTTGACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCGCTGGGAGAAGAGGATaGTGCAGTTTCCTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: QNSQPFDSLLMPREDLLAAGRRG*CSFLSR
Trigger: TCTGGACAGGAAACTGCACCATCCTCTTCTCCCAGC...GGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTCAAAGGGTTGCGAGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441012.7
CDS-3UTR CCA 90 bp ACCGCAGAGTATCTCAGGACCTTAAATGAAGATGTTAATCCTTGTCCCTTTGGGCTGGAGCCCCCTTGCTaGGAGAAGAGGATGGTGCAG +
Preference number: 4 (lower is better)
Translates to: TAEYLRTLNEDVNPCPFGLEPPC*EKRMVQ
Trigger: CTGCACCATCCTCTTCTCCCAGCAAGGGGGCTCCAG...CCCAAAGGGACAAGGATTAACATCTTCATTTAAGGTCCTGAGATACTCTGCGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419652.5
CDS-3UTR CCA 90 bp TCCACCGCAGAGTATCTCAGGACCTTAAATGAAGATGTTAATCCTTGTCCCTTTTGGGTGGGCAGTCTCTaGAGCCCCCTTGCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: STAEYLRTLNEDVNPCPFWVGSL*SPLAGR
Trigger: TCTCCCAGCAAGGGGGCTCCAGAGACTGCCCACCCA...AAAGGGACAAGGATTAACATCTTCATTTAAGGTCCTGAGATACTCTGCGGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419652.5
CDS-3UTR CCA 90 bp CACAGCTCCACCGCAGAGTATCTCAGGACCTTAAATGAAGATGTTAATCCTTGTGCAAGGGCCAGGCACTaGAACCAGGGGAGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: HSSTAEYLRTLNEDVNPCARARH*NQGRGD
Trigger: ATCACCTCTCCCCTGGTTCCAGTGCCTGGCCCTTGC...ACAAGGATTAACATCTTCATTTAAGGTCCTGAGATACTCTGCGGTGGAGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419652.5
CDS-3UTR TCA 90 bp GTTTGTGGGGTCAGCATGATCTTCAGACACAGCACAGTGTTAGCGAGGGCTCCAAAACTCGCAACCCTTTaGCTCTCTTTTAATGCCACG +
Preference number: 4 (lower is better)
Translates to: VCGVSMIFRHSTVLARAPKLATL*LSFNAT
Trigger: CGTGGCATTAAAAGAGAGTCAAAGGGTTGCGAGTTT...TGGAGCCCTCGCTAACACTGTGCTGTGTCTGAAGATCATGCTGACCCCACAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR GCA 90 bp ACCGCAGAGTATCTCAGGACCTTAAATGAAGATGTTAATCCTTGTCCCTTTGGGTCTCTGGAGCCCCCTTaGTGGGAGAAGAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: TAEYLRTLNEDVNPCPFGSLEPP*WEKRMV
Trigger: CACCATCCTCTTCTCCCAGCAAGGGGGCTCCAGAGA...CCCAAAGGGACAAGGATTAACATCTTCATTTAAGGTCCTGAGATACTCTGCGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419652.5
CDS-3UTR GCA 90 bp TTGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATTTCCAGCTTGTTTGCTaGATAGATTACAACGGTGAT +
Preference number: 4 (lower is better)
Translates to: LPFSVCSTSRRQPPGLSHFQLVC*IDYNGD
Trigger: ATCACCGTTGTAATCTATGCAGCAAACAAGCTGGAA...ATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616973.4
CDS-3UTR CCA 90 bp GTTCCTCCTCTTGCCGCTTCAGTTTCTTCAGGCGGATCTGTTCTTCTGACAGGAAAGGACATCTCTTCCTaGAGCCCTGGTCATTACCAA +
Preference number: 4 (lower is better)
Translates to: VPPLAASVSSGGSVLLTGKDISS*SPGHYQ
Trigger: TTGGTAATGACCAGGGCTCCAGGAAGAGATGTCCTT...TCCTGTCAGAAGAACAGATCCGCCTGAAGAAACTGAAGCGGCAAGAGGAGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420369.5
CDS-3UTR CCA 90 bp GACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTAAGGACATCTCTTCCTaGAGCCCTGGTCATTACCAA +
Preference number: 4 (lower is better)
Translates to: DSLLMPREDLLAQLPGMFKDISS*SPGHYQ
Trigger: TTGGTAATGACCAGGGCTCCAGGAAGAGATGTCCTT...AAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
CDS-3UTR CCA 90 bp CAAAACTCGCAACCCTTTGACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCCTGAAGCTGTACCTTaGCTTTGCCTATGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: QNSQPFDSLLMPREDLLAPEAVP*LCLWSP
Trigger: TGGAGACCATAGGCAAAGCCAAGGTACAGCTTCAGG...GGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTCAAAGGGTTGCGAGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616973.4
CDS-3UTR GCA 90 bp CAAAACTCGCAACCCTTTGACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGAACAGTCATTCGTaGACATCCCAGATCTCAGAG +
Preference number: 4 (lower is better)
Translates to: QNSQPFDSLLMPREDLLAQNSHS*TSQISE
Trigger: CTCTGAGATCTGGGATGTGCACGAATGACTGTTCTG...GGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTCAAAGGGTTGCGAGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR GCA 90 bp GACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGGGTTCCAGCTTGTTTaGTGCATAGATTACAACGGT +
Preference number: 4 (lower is better)
Translates to: DSLLMPREDLLAQLPGMFGFQLV*CIDYNG
Trigger: ACCGTTGTAATCTATGCAGCAAACAAGCTGGAACCC...AAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616973.4
CDS-3UTR CCA 90 bp CACAGCTCCACCGCAGAGTATCTCAGGACCTTAAATGAAGATGTTAATCCTTGTCTCTTCCTGGAGCCCTaGTCATTACCAAGGCACTGT +
Preference number: 4 (lower is better)
Translates to: HSSTAEYLRTLNEDVNPCLFLEP*SLPRHC
Trigger: ACAGTGCCTTGGTAATGACCAGGGCTCCAGGAAGAG...ACAAGGATTAACATCTTCATTTAAGGTCCTGAGATACTCTGCGGTGGAGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419652.5
CDS-3UTR GCA 90 bp ACCGCAGAGTATCTCAGGACCTTAAATGAAGATGTTAATCCTTGTCCCTTTGGGGGGAGAAGAGGATGGTaGAGTTTCCTGTCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: TAEYLRTLNEDVNPCPFGGRRGW*SFLSRS
Trigger: ACTTCTGGACAGGAAACTGCACCATCCTCTTCTCCC...CCCAAAGGGACAAGGATTAACATCTTCATTTAAGGTCCTGAGATACTCTGCGGT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000419652.5
CDS-3UTR CCA 90 bp TCCACCGCAGAGTATCTCAGGACCTTAAATGAAGATGTTAATCCTTGTCCCTTTGCTGGGAGAAGAGGATaGTGCAGTTTCCTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: STAEYLRTLNEDVNPCPFAGRRG*CSFLSR
Trigger: TCTGGACAGGAAACTGCACCATCCTCTTCTCCCAGC...AAAGGGACAAGGATTAACATCTTCATTTAAGGTCCTGAGATACTCTGCGGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419652.5
CDS-3UTR CCA 90 bp TCCACCGCAGAGTATCTCAGGACCTTAAATGAAGATGTTAATCCTTGTCCCTTTAAGGACATCTCTTCCTaGAGCCCTGGTCATTACCAA +
Preference number: 4 (lower is better)
Translates to: STAEYLRTLNEDVNPCPFKDISS*SPGHYQ
Trigger: TTGGTAATGACCAGGGCTCCAGGAAGAGATGTCCTT...AAAGGGACAAGGATTAACATCTTCATTTAAGGTCCTGAGATACTCTGCGGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419652.5
CDS-3UTR CAA 90 bp CCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCGTCCGGGCGGCTGCTaGCAGGTGCCACCCAGCGGG +
Preference number: 5 (lower is better)
Translates to: PSQSVPLLGGSHQASAIRRPGGC*QVPPSG
Trigger: CCCGCTGGGTGGCACCTGCAAGCAGCCGCCCGGACG...CCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616973.4
CDS CCA 90 bp TCCAGACTGGGGAGGACTGGGCGGGTGCCTGCAAGGGCCAGGCACTaGAACCAGGGGAGAGGTGATCTGGGCGGGAGGCAAGCACGACTA +
Preference number: 5 (lower is better)
Translates to: SRLGRTGRVPARARH*NQGRGDLGGRQARL
Trigger: TAGTCGTGCTTGCCTCCCGCCCAGATCACCTCTCCCCTGGTTCCAGTGCCTGGCCCTTGCAGGCACCCGCCCAGTCCTCCCCAGTCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419652.5
CDS TCA 90 bp GCCACCCAGCGGGTTCCAGCTTGTTTGCTGCATAGATTACAACGGTaGTGGCGGGCAAGCGGTCCGGCTGGAGCCGGGCGGCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: ATQRVPACLLHRLQR*WRASGPAGAGRLSS
Trigger: GGAGGAGAGCCGCCCGGCTCCAGCCGGACCGCTTGCCCGCCATCACCGTTGTAATCTATGCAGCAAACAAGCTGGAACCCGCTGGGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495866.5
ENST00000527464.5
ENST00000529540.5
ENST00000616973.4
CDS GCA 90 bp CCGGGCGGCTGCTTGCAGGTGCCACCCAGCGGGTTCCAGCTTGTTTaGTGCATAGATTACAACGGTGATGGCGGGCAAGCGGTCCGGCTG +
Preference number: 5 (lower is better)
Translates to: PGGCLQVPPSGFQLV*CIDYNGDGGQAVRL
Trigger: CAGCCGGACCGCTTGCCCGCCATCACCGTTGTAATCTATGCAGCAAACAAGCTGGAACCCGCTGGGTGGCACCTGCAAGCAGCCGCCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495866.5
ENST00000527464.5
ENST00000529540.5
ENST00000616973.4
CDS CCA 90 bp ATCCTGGCTTCCTCTCTGAGGATGCAGCTGCTGCCTCCCTGGGCCTaGCTGCTTGCATCCTGTGCGCCTGGCTTCCACAGCTCCACCGCA +
Preference number: 5 (lower is better)
Translates to: ILASSLRMQLLPPWA*LLASCAPGFHSSTA
Trigger: TGCGGTGGAGCTGTGGAAGCCAGGCGCACAGGATGCAAGCAGCCAGGCCCAGGGAGGCAGCAGCTGCATCCTCAGAGAGGAAGCCAGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 28 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000412937.5
ENST00000420369.5
ENST00000436029.5
ENST00000436778.5
ENST00000437276.1
ENST00000441012.7
ENST00000444396.5
ENST00000449369.5
ENST00000457932.5
ENST00000461778.5
ENST00000467728.5
ENST00000473222.1
ENST00000476086.6
ENST00000481020.5
ENST00000481889.6
ENST00000483882.1
ENST00000495866.5
ENST00000498548.1
ENST00000525441.5
ENST00000527464.5
ENST00000529540.5
ENST00000530310.1
ENST00000531660.5
ENST00000616973.4
CDS GCA 90 bp GGCGGCTGCTTGCAGGTGCCACCCAGCGGGTTCCAGCTTGTTTGCTaGATAGATTACAACGGTGATGGCGGGCAAGCGGTCCGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: GGCLQVPPSGFQLVC*IDYNGDGGQAVRLE
Trigger: CTCCAGCCGGACCGCTTGCCCGCCATCACCGTTGTAATCTATGCAGCAAACAAGCTGGAACCCGCTGGGTGGCACCTGCAAGCAGCCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495866.5
ENST00000527464.5
ENST00000529540.5
ENST00000616973.4
CDS CCA 90 bp CCACAGCTCCACCGCAGAGTCAAATCCCCAGGCCACCAGACTTCCTaGGTGGGCAGTCTCTGGAGCCCCCTTGCTGGGAGAAGAGGATGG +
Preference number: 5 (lower is better)
Translates to: PQLHRRVKSPGHQTS*VGSLWSPLAGRRGW
Trigger: CCATCCTCTTCTCCCAGCAAGGGGGCTCCAGAGACTGCCCACCCAGGAAGTCTGGTGGCCTGGGGATTTGACTCTGCGGTGGAGCTGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476086.6
CDS GCA 90 bp TGGGTGGGCAGTCTCTGGAGCCCCCTTGCTGGGAGAAGAGGATGGTaGAGTTTCCTGTCCAGAAGTCTCGGTGGCCAGCCAGTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: WVGSLWSPLAGRRGW*SFLSRSLGGQPVSW
Trigger: CCAGCTCACTGGCTGGCCACCGAGACTTCTGGACAGGAAACTGCACCATCCTCTTCTCCCAGCAAGGGGGCTCCAGAGACTGCCCACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000405853.7
ENST00000419652.5
ENST00000420369.5
ENST00000436029.5
ENST00000437276.1
ENST00000441012.7
ENST00000444396.5
ENST00000449369.5
ENST00000457932.5
ENST00000461778.5
ENST00000467728.5
ENST00000476086.6
ENST00000486991.1
ENST00000525441.5
CDS CCA 90 bp CTGCTAAGGAGCAGACCCACCAAATCCCCAGGCCACCAGACTTCCTaGGTGGGCAGTCTCTGGAGCCCCCTTGCTGGGAGAAGAGGATGG +
Preference number: 5 (lower is better)
Translates to: LLRSRPTKSPGHQTS*VGSLWSPLAGRRGW
Trigger: CCATCCTCTTCTCCCAGCAAGGGGGCTCCAGAGACTGCCCACCCAGGAAGTCTGGTGGCCTGGGGATTTGGTGGGTCTGCTCCTTAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000419652.5
ENST00000437276.1
ENST00000457932.5
ENST00000467728.5
ENST00000486991.1
CDS-3UTR CAA 90 bp CCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCGGCGGAAGAATCCCTaGCAGCCCTCGCAGCTCAGA +
Preference number: 5 (lower is better)
Translates to: PSQSVPLLGGSHQASAIRRRKNP*QPSQLR
Trigger: TCTGAGCTGCGAGGGCTGCAAGGGATTCTTCCGCCG...CCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp TCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGCGGCGGAAGAATCCCTaGCAGCCCTCGCAGCTCAGA +
Preference number: 5 (lower is better)
Translates to: SVCSTSRRQPPGLSHPAKRRKNP*QPSQLR
Trigger: TCTGAGCTGCGAGGGCTGCAAGGGATTCTTCCGCCG...CTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp ACTTGCGACGCATGTAGGTGTCCATGGGGCAGTGGCCGCCACTGTGGCAGATGTCGGCGGAAGAATCCCTaGCAGCCCTCGCAGCTCAGA +
Preference number: 5 (lower is better)
Translates to: TCDACRCPWGSGRHCGRCRRKNP*QPSQLR
Trigger: TCTGAGCTGCGAGGGCTGCAAGGGATTCTTCCGCCG...ACATCTGCCACAGTGGCGGCCACTGCCCCATGGACACCTACATGCGTCGCAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420369.5
CDS-3UTR CAA 90 bp CCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGCGGCGGAAGAATCCCTaGCAGCCCTCGCAGCTCAGA +
Preference number: 5 (lower is better)
Translates to: PFSVCSTSRRQPPGLSHPRRKNP*QPSQLR
Trigger: TCTGAGCTGCGAGGGCTGCAAGGGATTCTTCCGCCG...CGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp CCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCTCGATCATGCCCAGTaGTTCCGGGCTGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: PSQSVPLLGGSHQASAIRLDHAQ*FRAELG
Trigger: CCCCAGCTCAGCCCGGAACAACTGGGCATGATCGAG...CCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp TCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCACTCGATCATGCCCAGTaGTTCCGGGCTGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: SQSVPLLGGSHQASAIRPLDHAQ*FRAELG
Trigger: CCCCAGCTCAGCCCGGAACAACTGGGCATGATCGAG...TGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp CCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGCTCGATCATGCCCAGTaGTTCCGGGCTGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: PFSVCSTSRRQPPGLSHPLDHAQ*FRAELG
Trigger: CCCCAGCTCAGCCCGGAACAACTGGGCATGATCGAG...CGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp TTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCGCGCCGGTTACACTGTaGCTGGGCAGCGACGAGCTT +
Preference number: 5 (lower is better)
Translates to: FSVCSTSRRQPPGLSHPAAPVTL*LGSDEL
Trigger: AAGCTCGTCGCTGCCCAGCAACAGTGTAACCGGCGC...GGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp CAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAGCGCCGGTTACACTGTaGCTGGGCAGCGACGAGCTT +
Preference number: 5 (lower is better)
Translates to: QSVPLLGGSHQASAIRPRAPVTL*LGSDEL
Trigger: AAGCTCGTCGCTGCCCAGCAACAGTGTAACCGGCGC...TCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp CCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCGCCGGTTACACTGTaGCTGGGCAGCGACGAGCTT +
Preference number: 5 (lower is better)
Translates to: PFSVCSTSRRQPPGLSHPAPVTL*LGSDEL
Trigger: AAGCTCGTCGCTGCCCAGCAACAGTGTAACCGGCGC...CGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS TCA 90 bp GGTGATCTGGGCGCAGCCGCCTCTCCCCAGGTGTGTCAAGTACCGTaGCTCGAAGCCGGTCAGAAAAGGAGCGCCGGTTACACTGTTGCT +
Preference number: 5 (lower is better)
Translates to: GDLGAAASPQVCQVP*LEAGQKRSAGYTVA
Trigger: AGCAACAGTGTAACCGGCGCTCCTTTTCTGACCGGCTTCGAGTCACGGTACTTGACACACCTGGGGAGAGGCGGCTGCGCCCAGATCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487913.5
CDS GCA 90 bp GGCGTGACTCGAAGCCGGTCAGAAAAGGAGCGCCGGTTACACTGTTaGTGGGCAGCGACGAGCTTCTCGATCATGCCCAGTTGTTCCGGG +
Preference number: 5 (lower is better)
Translates to: GVTRSRSEKERRLHC*WAATSFSIMPSCSG
Trigger: CCCGGAACAACTGGGCATGATCGAGAAGCTCGTCGCTGCCCAGCAACAGTGTAACCGGCGCTCCTTTTCTGACCGGCTTCGAGTCACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000441012.7
ENST00000467728.5
ENST00000481020.5
ENST00000481889.6
ENST00000527464.5
ENST00000529540.5
ENST00000616973.4
CDS CCA 90 bp AGGCCACCAGACTTCCTGGGTGGGCAGTCTCTGGAGCCCCCTTGCTaGGAGAAGAGGATGGTGCAGTTTCCTGTCCAGAAGTCTCGGTGG +
Preference number: 5 (lower is better)
Translates to: RPPDFLGGQSLEPPC*EKRMVQFPVQKSRW
Trigger: CCACCGAGACTTCTGGACAGGAAACTGCACCATCCTCTTCTCCCAGCAAGGGGGCTCCAGAGACTGCCCACCCAGGAAGTCTGGTGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000405853.7
ENST00000419652.5
ENST00000420369.5
ENST00000436029.5
ENST00000437276.1
ENST00000441012.7
ENST00000444396.5
ENST00000449369.5
ENST00000457932.5
ENST00000461778.5
ENST00000467728.5
ENST00000476086.6
ENST00000486991.1
ENST00000525441.5
CDS CCA 90 bp TGCTGGGAGAAGAGGATGGTGCAGTTTCCTGTCCAGAAGTCTCGGTaGCCAGCCAGTGAGCTGGAGCTGAGCACAAGCAGGACCCAGCGC +
Preference number: 5 (lower is better)
Translates to: CWEKRMVQFPVQKSR*PASELELSTSRTQR
Trigger: GCGCTGGGTCCTGCTTGTGCTCAGCTCCAGCTCACTGGCTGGCCACCGAGACTTCTGGACAGGAAACTGCACCATCCTCTTCTCCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000419652.5
ENST00000449369.5
ENST00000457932.5
ENST00000486991.1
CDS-3UTR CAA 90 bp TGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCGGAAGAATCCCTaGCAGCCCTCGCAGCTCAGA +
Preference number: 5 (lower is better)
Translates to: CPSQSVPLLGGSHQASAIRRKNP*QPSQLR
Trigger: TCTGAGCTGCGAGGGCTGCAAGGGATTCTTCCGCCG...GATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp GTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAACGGCGGAAGAATCCCTaGCAGCCCTCGCAGCTCAGA +
Preference number: 5 (lower is better)
Translates to: VCSTSRRQPPGLSHPAKKRRKNP*QPSQLR
Trigger: TCTGAGCTGCGAGGGCTGCAAGGGATTCTTCCGCCG...TTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp TGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCTCGATCATGCCCAGTaGTTCCGGGCTGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: CPSQSVPLLGGSHQASAILDHAQ*FRAELG
Trigger: CCCCAGCTCAGCCCGGAACAACTGGGCATGATCGAG...GATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp GTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAGCGCCGGTTACACTGTaGCTGGGCAGCGACGAGCTT +
Preference number: 5 (lower is better)
Translates to: VCSTSRRQPPGLSHPAKKAPVTL*LGSDEL
Trigger: AAGCTCGTCGCTGCCCAGCAACAGTGTAACCGGCGC...TTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS TCA 90 bp GAGGATGGTGCAGTTTCCTGTCCAGAAGTCTCGGTGGCCAGCCAGTaGGCTGGAGCTGAGCACAAGCAGGACCCAGCGCTCTTAGCAGCT +
Preference number: 5 (lower is better)
Translates to: EDGAVSCPEVSVASQ*AGAEHKQDPALLAA
Trigger: AGCTGCTAAGAGCGCTGGGTCCTGCTTGTGCTCAGCTCCAGCTCACTGGCTGGCCACCGAGACTTCTGGACAGGAAACTGCACCATCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000419652.5
ENST00000449369.5
ENST00000457932.5
ENST00000486991.1
CDS TCA 90 bp GAGGATGGTGCAGTTTCCTGTCCAGAAGTCTCGGTGGCCAGCCAGTaGGCTGGAGCTGAGCACAAGCAGGACCTGGAGCCCCAGAGAAGT +
Preference number: 5 (lower is better)
Translates to: EDGAVSCPEVSVASQ*AGAEHKQDLEPQRS
Trigger: ACTTCTCTGGGGCTCCAGGTCCTGCTTGTGCTCAGCTCCAGCTCACTGGCTGGCCACCGAGACTTCTGGACAGGAAACTGCACCATCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000436029.5
ENST00000437276.1
ENST00000461778.5
ENST00000525441.5
CDS TCA 90 bp GAGGATGGTGCAGTTTCCTGTCCAGAAGTCTCGGTGGCCAGCCAGTaGGCTGGAGCTGAGCACAAGCAGGACCTCGTGGAGCAAAGGTCC +
Preference number: 5 (lower is better)
Translates to: EDGAVSCPEVSVASQ*AGAEHKQDLVEQRS
Trigger: GGACCTTTGCTCCACGAGGTCCTGCTTGTGCTCAGCTCCAGCTCACTGGCTGGCCACCGAGACTTCTGGACAGGAAACTGCACCATCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444396.5
CDS GCA 90 bp ACCGTGACTCGAAGCCGGTCAGAAAAGGAGCGCCGGTTACACTGTTaGTGGGCAGCGACGAGCTTCTCGATCATGCCCAGTTGTTCCGGG +
Preference number: 5 (lower is better)
Translates to: TVTRSRSEKERRLHC*WAATSFSIMPSCSG
Trigger: CCCGGAACAACTGGGCATGATCGAGAAGCTCGTCGCTGCCCAGCAACAGTGTAACCGGCGCTCCTTTTCTGACCGGCTTCGAGTCACGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000487913.5
ENST00000527949.1
ENST00000531660.5
CDS GCA 90 bp TCCCAGCTCGATGTCTGGAGGCCCCTCCCACAGATAATCCCACTCTaGTTCTCCCTTCATCCCTTGCCCTTCTCCAGCCACCTCGATCGC +
Preference number: 5 (lower is better)
Translates to: SQLDVWRPLPQIIPL*FSLHPLPFSSHLDR
Trigger: GCGATCGAGGTGGCTGGAGAAGGGCAAGGGATGAAGGGAGAAGCAGAGTGGGATTATCTGTGGGAGGGGCCTCCAGACATCGAGCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481020.5
ENST00000481889.6
ENST00000487913.5
CDS GCA 90 bp TCTTGGAGCATGGCCTCTTCCAGGGAGGCCGATTCTCCTCATCCCTaGTTCCCAGCAGATTTGGCTCTCCCAGCTCGATGTCTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: SWSMASSREADSPHP*FPADLALPARCLEA
Trigger: GGCCTCCAGACATCGAGCTGGGAGAGCCAAATCTGCTGGGAAGCAGGGATGAGGAGAATCGGCCTCCCTGGAAGAGGCCATGCTCCAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481020.5
ENST00000481889.6
ENST00000487913.5
CDS CCA 90 bp GTGACTCGAAGCCGGTCAGAAAAGGAGCGCCGGTTACACTGTTGCTaGGCAGCGACGAGCTTCTCGATCATGCCCAGTTGTTCCGGGCTG +
Preference number: 5 (lower is better)
Translates to: VTRSRSEKERRLHCC*AATSFSIMPSCSGL
Trigger: CAGCCCGGAACAACTGGGCATGATCGAGAAGCTCGTCGCTGCCCAGCAACAGTGTAACCGGCGCTCCTTTTCTGACCGGCTTCGAGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481020.5
ENST00000481889.6
ENST00000487913.5
ENST00000527464.5
ENST00000527949.1
ENST00000529540.5
ENST00000531660.5
ENST00000616973.4
CDS CCA 90 bp GTCATTACCAAGGCACTGTCCAAATCCCCAGGCCACCAGACTTCCTaGGTGGGCAGTCTCTGGAGCCCCCTTGCTGGGAGAAGAGGATGG +
Preference number: 5 (lower is better)
Translates to: VITKALSKSPGHQTS*VGSLWSPLAGRRGW
Trigger: CCATCCTCTTCTCCCAGCAAGGGGGCTCCAGAGACTGCCCACCCAGGAAGTCTGGTGGCCTGGGGATTTGGACAGTGCCTTGGTAATGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000405853.7
ENST00000420369.5
ENST00000441012.7
ENST00000444396.5
ENST00000449369.5
ENST00000525441.5
CDS CCA 90 bp AGGCACAGGGGCCCCCAGCCACAAGGACATCTCTTCCTGGAGCCCTaGTCATTACCAAGGCACTGTCCTTCTTATGCTCCTCCGCCACAG +
Preference number: 5 (lower is better)
Translates to: RHRGPQPQGHLFLEP*SLPRHCPSYAPPPQ
Trigger: CTGTGGCGGAGGAGCATAAGAAGGACAGTGCCTTGGTAATGACCAGGGCTCCAGGAAGAGATGTCCTTGTGGCTGGGGGCCCCTGTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407404.5
CDS CCA 90 bp TGCTGGGAGAAGAGGATGGTGCAGTTTCCTGTCCAGAAGTCTCGGTaGCCAGCCAGTGAGCTGGAGCTGAGCACAAGCAGGACCTGGAGC +
Preference number: 5 (lower is better)
Translates to: CWEKRMVQFPVQKSR*PASELELSTSRTWS
Trigger: GCTCCAGGTCCTGCTTGTGCTCAGCTCCAGCTCACTGGCTGGCCACCGAGACTTCTGGACAGGAAACTGCACCATCCTCTTCTCCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000436029.5
ENST00000437276.1
ENST00000461778.5
ENST00000467728.5
ENST00000525441.5
CDS CCA 90 bp TGCTGGGAGAAGAGGATGGTGCAGTTTCCTGTCCAGAAGTCTCGGTaGCCAGCCAGTGAGCTGGAGCTGAGCACAAGCAGGACCTCGTGG +
Preference number: 5 (lower is better)
Translates to: CWEKRMVQFPVQKSR*PASELELSTSRTSW
Trigger: CCACGAGGTCCTGCTTGTGCTCAGCTCCAGCTCACTGGCTGGCCACCGAGACTTCTGGACAGGAAACTGCACCATCCTCTTCTCCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444396.5
CDS CCA 90 bp AGGCAAAGCGCTTTGAGTCGGACATCAAGAAGCCCACTGGTGATCTaGGCGCAGCCGCCTCTCCCCAGGTGTGTCAAGTACCGTGACTCG +
Preference number: 5 (lower is better)
Translates to: RQSALSRTSRSPLVI*AQPPLPRCVKYRDS
Trigger: CGAGTCACGGTACTTGACACACCTGGGGAGAGGCGGCTGCGCCCAGATCACCAGTGGGCTTCTTGATGTCCGACTCAAAGCGCTTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487913.5
CDS-3UTR CAA 90 bp GCGACGCATGTAGGTGTCCATGGGGCAGTGGCCGCCACTGTGGCAGATGTAGTGCCCCTTTTTCCGCTTTaGTGGACGGATCTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: ATHVGVHGAVAATVADVVPLFPL*WTDLCG
Trigger: CCCACAGAGATCCGTCCACAAAAGCGGAAAAAGGGG...CACTACATCTGCCACAGTGGCGGCCACTGCCCCATGGACACCTACATGCGTCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420369.5
CDS-3UTR CAA 90 bp TTGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCGGCGGAAGAATCCCTaGCAGCCCTCGCAGCTCAGA +
Preference number: 5 (lower is better)
Translates to: LPFSVCSTSRRQPPGLSHRRKNP*QPSQLR
Trigger: TCTGAGCTGCGAGGGCTGCAAGGGATTCTTCCGCCG...ATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACACGGCGGAAGAATCCCTaGCAGCCCTCGCAGCTCAGA +
Preference number: 5 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTRRKNP*QPSQLR
Trigger: TCTGAGCTGCGAGGGCTGCAAGGGATTCTTCCGCCG...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp TCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACTCGATCATGCCCAGTaGTTCCGGGCTGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: SVPLLGGSHQASAIRPRKLDHAQ*FRAELG
Trigger: CCCCAGCTCAGCCCGGAACAACTGGGCATGATCGAG...TTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACACTCGATCATGCCCAGTaGTTCCGGGCTGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTLDHAQ*FRAELG
Trigger: CCCCAGCTCAGCCCGGAACAACTGGGCATGATCGAG...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp TTGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCTCGATCATGCCCAGTaGTTCCGGGCTGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: LPFSVCSTSRRQPPGLSHLDHAQ*FRAELG
Trigger: CCCCAGCTCAGCCCGGAACAACTGGGCATGATCGAG...ATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp TCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAAGCGCCGGTTACACTGTaGCTGGGCAGCGACGAGCTT +
Preference number: 5 (lower is better)
Translates to: SVPLLGGSHQASAIRPRKAPVTL*LGSDEL
Trigger: AAGCTCGTCGCTGCCCAGCAACAGTGTAACCGGCGC...TTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGCGCCGGTTACACTGTaGCTGGGCAGCGACGAGCTT +
Preference number: 5 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTAPVTL*LGSDEL
Trigger: AAGCTCGTCGCTGCCCAGCAACAGTGTAACCGGCGC...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp TCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCACTCTCACTCCCAGGGTaGTACCTCCGAGATGTCTCC +
Preference number: 5 (lower is better)
Translates to: SQSVPLLGGSHQASAIRPLSLPG*YLRDVS
Trigger: GGAGACATCTCGGAGGTACAACCCTGGGAGTGAGAG...TGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp CCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGAGCGGTGGGAGCTTTTaGTCCTGCAGACGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: PSQSVPLLGGSHQASAIRSGGSF*SCRRSA
Trigger: TGCACTGCGTCTGCAGGACAAAAAGCTCCCACCGCT...CCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp TCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGCGGTGGGAGCTTTTaGTCCTGCAGACGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: SQSVPLLGGSHQASAIRPSGGSF*SCRRSA
Trigger: TGCACTGCGTCTGCAGGACAAAAAGCTCCCACCGCT...TGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp CAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAGCGGTGGGAGCTTTTaGTCCTGCAGACGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: QSVPLLGGSHQASAIRPRSGGSF*SCRRSA
Trigger: TGCACTGCGTCTGCAGGACAAAAAGCTCCCACCGCT...TCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp GTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGCTAGGAGGGCTGGTCTaGGAGCATGGCCTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: VPLLGGSHQASAIRPRKQLGGLV*EHGLFQ
Trigger: CTGGAAGAGGCCATGCTCCAAGACCAGCCCTCCTAG...CTGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481889.6
CDS CCA 90 bp CTTCCAGGGAGGCCGATTCTCCTCATCCCTGCTTCCCAGCAGATTTaGCTCTCCCAGCTCGATGTCTGGAGGCCCCTCCCACAGATAATC +
Preference number: 5 (lower is better)
Translates to: LPGRPILLIPASQQI*LSQLDVWRPLPQII
Trigger: GATTATCTGTGGGAGGGGCCTCCAGACATCGAGCTGGGAGAGCCAAATCTGCTGGGAAGCAGGGATGAGGAGAATCGGCCTCCCTGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481020.5
ENST00000481889.6
ENST00000487913.5
CDS-3UTR CAA 90 bp TTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCCCCCTTTTTCCGCTTTaGTGGACGGATCTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: FSVCSTSRRQPPGLSHPAPLFPL*WTDLCG
Trigger: CCCACAGAGATCCGTCCACAAAAGCGGAAAAAGGGG...GGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CAA 90 bp TCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCACCCCTTTTTCCGCTTTaGTGGACGGATCTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: SQSVPLLGGSHQASAIRPPLFPL*WTDLCG
Trigger: CCCACAGAGATCCGTCCACAAAAGCGGAAAAAGGGG...TGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CAA 90 bp ACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTCTCGATCATGCCCAGTaGTTCCGGGCTGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: TGGSPCPAPRNVCPSQSVLDHAQ*FRAELG
Trigger: CCCCAGCTCAGCCCGGAACAACTGGGCATGATCGAG...AACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CAA 90 bp GCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTCTCTCACTCCCAGGGTaGTACCTCCGAGATGTCTCC +
Preference number: 5 (lower is better)
Translates to: ATGGSPCPAPRNVCPSQSLSLPG*YLRDVS
Trigger: GGAGACATCTCGGAGGTACAACCCTGGGAGTGAGAG...AGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CAA 90 bp GCCCCCAGGCCCATCCGTTTGTGGGGTCAGCATGATCTTCAGACACAGCACAGTAGCGGTGGGAGCTTTTaGTCCTGCAGACGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: APRPIRLWGQHDLQTQHSSGGSF*SCRRSA
Trigger: TGCACTGCGTCTGCAGGACAAAAAGCTCCCACCGCT...ACTGTGCTGTGTCTGAAGATCATGCTGACCCCACAAACGGATGGGCCTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR CAA 90 bp GCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTCCCAGGCCCATCCGTTaGTGGGGTCAGCATGATCTT +
Preference number: 5 (lower is better)
Translates to: ATGGSPCPAPRNVCPSQSPRPIR*WGQHDL
Trigger: AAGATCATGCTGACCCCACAAACGGATGGGCCTGGG...AGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR CAA 90 bp CCCCCAGGCCCATCCGTTTGTGGGGTCAGCATGATCTTCAGACACAGCACAGTGCCCAGGCCCATCCGTTaGTGGGGTCAGCATGATCTT +
Preference number: 5 (lower is better)
Translates to: PPGPSVCGVSMIFRHSTVPRPIR*WGQHDL
Trigger: AAGATCATGCTGACCCCACAAACGGATGGGCCTGGG...CACTGTGCTGTGTCTGAAGATCATGCTGACCCCACAAACGGATGGGCCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR CAA 90 bp GTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGGCCAGCAGGGAATGTTaGGGTGCATCTGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: VPLLGGSHQASAIRPRKQASREC*GASALL
Trigger: AAGCAGGGCAGATGCACCCAAACATTCCCTGCTGGC...CTGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467728.5
CDS-3UTR CAA 90 bp CAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGATGCTTCCCAGCAGATTaGGCTCTCCCAGCTCGATGT +
Preference number: 5 (lower is better)
Translates to: QSVPLLGGSHQASAIRPRCFPAD*ALPARC
Trigger: ACATCGAGCTGGGAGAGCCAAATCTGCTGGGAAGCA...TCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481889.6
CDS TCA 90 bp AGCTGGTCCTGCACGTTGGGCCGGTCTATAGGTCACCAAGAGAGTTaGGGAGCAGGTCTGGCCAGGGTCCAGTTCCATACCCCAAATTGC +
Preference number: 5 (lower is better)
Translates to: SWSCTLGRSIGHQES*GAGLARVQFHTPNC
Trigger: GCAATTTGGGGTATGGAACTGGACCCTGGCCAGACCTGCTCCTCAACTCTCTTGGTGACCTATAGACCGGCCCAACGTGCAGGACCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462051.5
ENST00000494018.1
CDS CCA 90 bp AGGCACAGGGGCCCCCAGCCACAAGGACATCTCTTCCTGGAGCCCTaGTCATTACCAAGGCACTGTCCTGCAGGAAGGACCCAGATTATA +
Preference number: 5 (lower is better)
Translates to: RHRGPQPQGHLFLEP*SLPRHCPAGRTQII
Trigger: TATAATCTGGGTCCTTCCTGCAGGACAGTGCCTTGGTAATGACCAGGGCTCCAGGAAGAGATGTCCTTGTGGCTGGGGGCCCCTGTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000436029.5
ENST00000461778.5
ENST00000467728.5
ENST00000498548.1
CDS-3UTR CAA 90 bp GCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTCCCCTTTTTCCGCTTTaGTGGACGGATCTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: ATGGSPCPAPRNVCPSQSPLFPL*WTDLCG
Trigger: CCCACAGAGATCCGTCCACAAAAGCGGAAAAAGGGG...AGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CAA 90 bp TCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAGCCTGTTCCTCCTCTaGCCGCTTCAGTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: SVCSTSRRQPPGLSHPAKSLFLL*PLQFLQ
Trigger: CTGAAGAAACTGAAGCGGCAAGAGGAGGAACAGGCT...CTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp TTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAGCCTGTTCCTCCTCTaGCCGCTTCAGTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: FSVCSTSRRQPPGLSHPASLFLL*PLQFLQ
Trigger: CTGAAGAAACTGAAGCGGCAAGAGGAGGAACAGGCT...GGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp CAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAGCCTGTTCCTCCTCTaGCCGCTTCAGTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: QSVPLLGGSHQASAIRPRSLFLL*PLQFLQ
Trigger: CTGAAGAAACTGAAGCGGCAAGAGGAGGAACAGGCT...TCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp TTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTGCGCCGGTTACACTGTaGCTGGGCAGCGACGAGCTT +
Preference number: 5 (lower is better)
Translates to: FNATGGSPCPAPRNVCPSAPVTL*LGSDEL
Trigger: AAGCTCGTCGCTGCCCAGCAACAGTGTAACCGGCGC...AGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CAA 90 bp TTAGCGAGGGCTCCACTGCTCAGTAGCCACAAAACTCGCAACCCTTTGACTCTCGCGCCGGTTACACTGTaGCTGGGCAGCGACGAGCTT +
Preference number: 5 (lower is better)
Translates to: LARAPLLSSHKTRNPLTLAPVTL*LGSDEL
Trigger: AAGCTCGTCGCTGCCCAGCAACAGTGTAACCGGCGC...GAGAGTCAAAGGGTTGCGAGTTTTGTGGCTACTGAGCAGTGGAGCCCTCGCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR CAA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACACTCTCACTCCCAGGGTaGTACCTCCGAGATGTCTCC +
Preference number: 5 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTLSLPG*YLRDVS
Trigger: GGAGACATCTCGGAGGTACAACCCTGGGAGTGAGAG...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp TCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACTCTCACTCCCAGGGTaGTACCTCCGAGATGTCTCC +
Preference number: 5 (lower is better)
Translates to: SVPLLGGSHQASAIRPRKLSLPG*YLRDVS
Trigger: GGAGACATCTCGGAGGTACAACCCTGGGAGTGAGAG...TTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp CGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTCCTCTCACTCCCAGGGTaGTACCTCCGAGATGTCTCC +
Preference number: 5 (lower is better)
Translates to: REDLLAQLPGMFALLSLFLSLPG*YLRDVS
Trigger: GGAGACATCTCGGAGGTACAACCCTGGGAGTGAGAG...GAACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CAA 90 bp TCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAACTTGCAGCCCTGCTTaGGCAAAGTCTTCCCGGTTA +
Preference number: 5 (lower is better)
Translates to: SQSVPLLGGSHQASAIRPTCSPA*AKSSRL
Trigger: TAACCGGGAAGACTTTGCCAAAGCAGGGCTGCAAGT...TGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp TCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGACTTGCAGCCCTGCTTaGGCAAAGTCTTCCCGGTTA +
Preference number: 5 (lower is better)
Translates to: SVCSTSRRQPPGLSHPAKTCSPA*AKSSRL
Trigger: TAACCGGGAAGACTTTGCCAAAGCAGGGCTGCAAGT...CTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp CCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCTCGGCATCATTGAGTaGCAGCTCATTCATGGCCCT +
Preference number: 5 (lower is better)
Translates to: PSQSVPLLGGSHQASAIRLGIIE*QLIHGP
Trigger: AGGGCCATGAATGAGCTGCAACTCAATGATGCCGAG...CCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp CCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGCTCGGCATCATTGAGTaGCAGCTCATTCATGGCCCT +
Preference number: 5 (lower is better)
Translates to: PFSVCSTSRRQPPGLSHPLGIIE*QLIHGP
Trigger: AGGGCCATGAATGAGCTGCAACTCAATGATGCCGAG...CGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp TCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAAAGCGGTGGGAGCTTTTaGTCCTGCAGACGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: SVPLLGGSHQASAIRPRKSGGSF*SCRRSA
Trigger: TGCACTGCGTCTGCAGGACAAAAAGCTCCCACCGCT...TTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp TTGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATAGCGGTGGGAGCTTTTaGTCCTGCAGACGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: LPFSVCSTSRRQPPGLSHSGGSF*SCRRSA
Trigger: TGCACTGCGTCTGCAGGACAAAAAGCTCCCACCGCT...ATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp CACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTAGCGGTGGGAGCTTTTaGTCCTGCAGACGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: HGRISLPSSQECLPFSVCSGGSF*SCRRSA
Trigger: TGCACTGCGTCTGCAGGACAAAAAGCTCCCACCGCT...ACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CAA 90 bp TTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAGCTCCCAGGAATGTTaGCCCTTCTCAGTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: FSVCSTSRRQPPGLSHPASSQEC*PFSVCS
Trigger: GGAACAGACTGAGAAGGGCAAACATTCCTGGGAGCT...GGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS GCA 90 bp TCACTCCCAGGGTTGTACCTCCGAGATGTCTCCAGAAGCATCACCTaGACACAAGCAGCAAACCTCAAACGGGGACTAGGAGGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: SLPGLYLRDVSRSIT*TQAANLKRGLGGLV
Trigger: GACCAGCCCTCCTAGTCCCCGTTTGAGGTTTGCTGCTTGTGTGCAGGTGATGCTTCTGGAGACATCTCGGAGGTACAACCCTGGGAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481020.5
ENST00000481889.6
ENST00000487913.5
CDS CCA 90 bp CTCATCCCTGCTTCCCAGCAGATTTGGCTCTCCCAGCTCGATGTCTaGAGGCCCCTCCCACAGATAATCCCACTCTGCTTCTCCCTTCAT +
Preference number: 5 (lower is better)
Translates to: LIPASQQIWLSQLDV*RPLPQIIPLCFSLH
Trigger: ATGAAGGGAGAAGCAGAGTGGGATTATCTGTGGGAGGGGCCTCCAGACATCGAGCTGGGAGAGCCAAATCTGCTGGGAAGCAGGGATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481020.5
ENST00000481889.6
ENST00000487913.5
CDS-3UTR CAA 90 bp GTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGAGCCTGTTCCTCCTCTaGCCGCTTCAGTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: VPLLGGSHQASAIRPRKQSLFLL*PLQFLQ
Trigger: CTGAAGAAACTGAAGCGGCAAGAGGAGGAACAGGCT...CTGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp TGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCAGCCTGTTCCTCCTCTaGCCGCTTCAGTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: CPSQSVPLLGGSHQASAISLFLL*PLQFLQ
Trigger: CTGAAGAAACTGAAGCGGCAAGAGGAGGAACAGGCT...GATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp ACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTCTCTCACTCCCAGGGTaGTACCTCCGAGATGTCTCC +
Preference number: 5 (lower is better)
Translates to: TGGSPCPAPRNVCPSQSVLSLPG*YLRDVS
Trigger: GGAGACATCTCGGAGGTACAACCCTGGGAGTGAGAG...AACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CAA 90 bp GTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAACTCGGCATCATTGAGTaGCAGCTCATTCATGGCCCT +
Preference number: 5 (lower is better)
Translates to: VCSTSRRQPPGLSHPAKKLGIIE*QLIHGP
Trigger: AGGGCCATGAATGAGCTGCAACTCAATGATGCCGAG...TTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp TGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCTCGGCATCATTGAGTaGCAGCTCATTCATGGCCCT +
Preference number: 5 (lower is better)
Translates to: CPSQSVPLLGGSHQASAILGIIE*QLIHGP
Trigger: AGGGCCATGAATGAGCTGCAACTCAATGATGCCGAG...GATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp GTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGAGCTCCCAGGAATGTTaGCCCTTCTCAGTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: VPLLGGSHQASAIRPRKQSSQEC*PFSVCS
Trigger: GGAACAGACTGAGAAGGGCAAACATTCCTGGGAGCT...CTGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp GTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAAGCTCCCAGGAATGTTaGCCCTTCTCAGTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: VCSTSRRQPPGLSHPAKKSSQEC*PFSVCS
Trigger: GGAACAGACTGAGAAGGGCAAACATTCCTGGGAGCT...TTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp GTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAACTGCGCTTCGTTACCTaGGTAATGAGAGATGGGCTC +
Preference number: 5 (lower is better)
Translates to: VCSTSRRQPPGLSHPAKKLRFVT*VMRDGL
Trigger: GAGCCCATCTCTCATTACCAAGGTAACGAAGCGCAG...TTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616973.4
CDS TCA 90 bp CCCTTCCCCCTCACTCCAACACTGAGGACAGCTCACTCCACCCAGTaGAACACGCTGCTTATTAGAGAACCTCGCTCGTGCCACTTTCCA +
Preference number: 5 (lower is better)
Translates to: PFPLTPTLRTAHSTQ*NTLLIREPRSCHFP
Trigger: TGGAAAGTGGCACGAGCGAGGTTCTCTAATAAGCAGCGTGTTTCACTGGGTGGAGTGAGCTGTCCTCAGTGTTGGAGTGAGGGGGAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467728.5
ENST00000486991.1
CDS-3UTR CAA 90 bp TTGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATAGCCTGTTCCTCCTCTaGCCGCTTCAGTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: LPFSVCSTSRRQPPGLSHSLFLL*PLQFLQ
Trigger: CTGAAGAAACTGAAGCGGCAAGAGGAGGAACAGGCT...ATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp TCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAAACTTGCAGCCCTGCTTaGGCAAAGTCTTCCCGGTTA +
Preference number: 5 (lower is better)
Translates to: SVPLLGGSHQASAIRPRKTCSPA*AKSSRL
Trigger: TAACCGGGAAGACTTTGCCAAAGCAGGGCTGCAAGT...TTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAACTTGCAGCCCTGCTTaGGCAAAGTCTTCCCGGTTA +
Preference number: 5 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTTCSPA*AKSSRL
Trigger: TAACCGGGAAGACTTTGCCAAAGCAGGGCTGCAAGT...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp CGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTCACTTGCAGCCCTGCTTaGGCAAAGTCTTCCCGGTTA +
Preference number: 5 (lower is better)
Translates to: REDLLAQLPGMFALLSLFTCSPA*AKSSRL
Trigger: TAACCGGGAAGACTTTGCCAAAGCAGGGCTGCAAGT...GAACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CAA 90 bp CAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAGTTGATGAATTCCACTaGCAGCCCTGCTTTGGCAAA +
Preference number: 5 (lower is better)
Translates to: QSVPLLGGSHQASAIRPRVDEFH*QPCFGK
Trigger: TTTGCCAAAGCAGGGCTGCAAGTGGAATTCATCAAC...TCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp TCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAGTTGATGAATTCCACTaGCAGCCCTGCTTTGGCAAA +
Preference number: 5 (lower is better)
Translates to: SQSVPLLGGSHQASAIRPVDEFH*QPCFGK
Trigger: TTTGCCAAAGCAGGGCTGCAAGTGGAATTCATCAAC...TGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp CCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGGTTGATGAATTCCACTaGCAGCCCTGCTTTGGCAAA +
Preference number: 5 (lower is better)
Translates to: PSQSVPLLGGSHQASAIRVDEFH*QPCFGK
Trigger: TTTGCCAAAGCAGGGCTGCAAGTGGAATTCATCAAC...CCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp TGTGCAAAGTGGCCCCCAGGCCCATCCGTTTGTGGGGTCAGCATGATCTTCAGACTCGGCATCATTGAGTaGCAGCTCATTCATGGCCCT +
Preference number: 5 (lower is better)
Translates to: CAKWPPGPSVCGVSMIFRLGIIE*QLIHGP
Trigger: AGGGCCATGAATGAGCTGCAACTCAATGATGCCGAG...TCTGAAGATCATGCTGACCCCACAAACGGATGGGCCTGGGGGCCACTTTGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR CAA 90 bp TTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCGCAAACTCGGCATCATaGAGTTGCAGCTCATTCATG +
Preference number: 5 (lower is better)
Translates to: FSVCSTSRRQPPGLSHPAANSAS*SCSSFM
Trigger: CATGAATGAGCTGCAACTCAATGATGCCGAGTTTGC...GGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp CCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCAAACTCGGCATCATaGAGTTGCAGCTCATTCATG +
Preference number: 5 (lower is better)
Translates to: PFSVCSTSRRQPPGLSHPANSAS*SCSSFM
Trigger: CATGAATGAGCTGCAACTCAATGATGCCGAGTTTGC...CGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp TTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTAGCGGTGGGAGCTTTTaGTCCTGCAGACGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: FNATGGSPCPAPRNVCPSSGGSF*SCRRSA
Trigger: TGCACTGCGTCTGCAGGACAAAAAGCTCCCACCGCT...AGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CAA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAAGCTCCCAGGAATGTTaGCCCTTCTCAGTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTSSQEC*PFSVCS
Trigger: GGAACAGACTGAGAAGGGCAAACATTCCTGGGAGCT...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp CGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTCAGCTCCCAGGAATGTTaGCCCTTCTCAGTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: REDLLAQLPGMFALLSLFSSQEC*PFSVCS
Trigger: GGAACAGACTGAGAAGGGCAAACATTCCTGGGAGCT...GAACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CAA 90 bp TGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAAGCTGTACCTTGGCTTaGCCTATGGTCTCCAGTAGC +
Preference number: 5 (lower is better)
Translates to: CSTSRRQPPGLSHPAKKTSCTLA*PMVSSS
Trigger: GCTACTGGAGACCATAGGCAAAGCCAAGGTACAGCT...TGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616973.4
CDS-3UTR CAA 90 bp GTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGCCCCTTTTTCCGCTTTaGTGGACGGATCTCTGGATA +
Preference number: 5 (lower is better)
Translates to: VPLLGGSHQASAIRPRKQPLFPL*WTDLWI
Trigger: TATCCAGAGATCCGTCCACAAAAGCGGAAAAAGGGG...CTGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527949.1
CDS-3UTR CAA 90 bp TCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTCCCCTTTTTCCGCTTTaGTGGACGGATCTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: SFNATGGSPCPAPRNVCPPLFPL*WTDLCG
Trigger: CCCACAGAGATCCGTCCACAAAAGCGGAAAAAGGGG...AGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR CAA 90 bp TGGGGTCAGCATGATCTTCAGACACAGCACAGTGTTAGCGAGGGCTCCACTGCTAGCCTGTTCCTCCTCTaGCCGCTTCAGTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: WGQHDLQTQHSVSEGSTASLFLL*PLQFLQ
Trigger: CTGAAGAAACTGAAGCGGCAAGAGGAGGAACAGGCT...AGCAGTGGAGCCCTCGCTAACACTGTGCTGTGTCTGAAGATCATGCTGACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR CAA 90 bp ACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTACTTGCAGCCCTGCTTaGGCAAAGTCTTCCCGGTTA +
Preference number: 5 (lower is better)
Translates to: TGGSPCPAPRNVCPSQSVTCSPA*AKSSRL
Trigger: TAACCGGGAAGACTTTGCCAAAGCAGGGCTGCAAGT...AACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CAA 90 bp GTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAGTTGATGAATTCCACTaGCAGCCCTGCTTTGGCAAA +
Preference number: 5 (lower is better)
Translates to: VCSTSRRQPPGLSHPAKKVDEFH*QPCFGK
Trigger: TTTGCCAAAGCAGGGCTGCAAGTGGAATTCATCAAC...TTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp GTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGGTTGATGAATTCCACTaGCAGCCCTGCTTTGGCAAA +
Preference number: 5 (lower is better)
Translates to: VPLLGGSHQASAIRPRKQVDEFH*QPCFGK
Trigger: TTTGCCAAAGCAGGGCTGCAAGTGGAATTCATCAAC...CTGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp GTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATCCGGCCAAGAAAACAGGCAAACTCGGCATCATaGAGTTGCAGCTCATTCATG +
Preference number: 5 (lower is better)
Translates to: VPLLGGSHQASAIRPRKQANSAS*SCSSFM
Trigger: CATGAATGAGCTGCAACTCAATGATGCCGAGTTTGC...CTGTTTTCTTGGCCGGATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000527949.1
ENST00000616973.4
CDS-3UTR CAA 90 bp CGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTCCGGGTTCCAGCTTGTTaGCTGCATAGATTACAACGG +
Preference number: 5 (lower is better)
Translates to: REDLLAQLPGMFALLSLFRVPAC*LHRLQR
Trigger: CCGTTGTAATCTATGCAGCAAACAAGCTGGAACCCG...GAACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616973.4
CDS-3UTR CAA 90 bp TGGCATGAGCCTGTTCCTCCTCTTGCCGCTTCAGTTTCTTCAGGCGGATCTGTTAGCCTGTTCCTCCTCTaGCCGCTTCAGTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: WHEPVPPLAASVSSGGSVSLFLL*PLQFLQ
Trigger: CTGAAGAAACTGAAGCGGCAAGAGGAGGAACAGGCT...AACAGATCCGCCTGAAGAAACTGAAGCGGCAAGAGGAGGAACAGGCTCATGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420369.5
CDS-3UTR CAA 90 bp GTTTGTGGGGTCAGCATGATCTTCAGACACAGCACAGTGTTAGCGAGGGCTCCAAGCCTGTTCCTCCTCTaGCCGCTTCAGTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: VCGVSMIFRHSTVLARAPSLFLL*PLQFLQ
Trigger: CTGAAGAAACTGAAGCGGCAAGAGGAGGAACAGGCT...TGGAGCCCTCGCTAACACTGTGCTGTGTCTGAAGATCATGCTGACCCCACAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR CAA 90 bp TCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTACTTGCAGCCCTGCTTaGGCAAAGTCTTCCCGGTTA +
Preference number: 5 (lower is better)
Translates to: SFNATGGSPCPAPRNVCPTCSPA*AKSSRL
Trigger: TAACCGGGAAGACTTTGCCAAAGCAGGGCTGCAAGT...AGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR CAA 90 bp TTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCTCGGCATCATTGAGTaGCAGCTCATTCATGGCCCT +
Preference number: 5 (lower is better)
Translates to: FNATGGSPCPAPRNVCPSLGIIE*QLIHGP
Trigger: AGGGCCATGAATGAGCTGCAACTCAATGATGCCGAG...AGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CAA 90 bp TCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTAGCTCCCAGGAATGTTaGCCCTTCTCAGTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: SFNATGGSPCPAPRNVCPSSQEC*PFSVCS
Trigger: GGAACAGACTGAGAAGGGCAAACATTCCTGGGAGCT...AGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR CAA 90 bp GACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTAGCCTGTTCCTCCTCTaGCCGCTTCAGTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: DSLLMPREDLLAQLPGMFSLFLL*PLQFLQ
Trigger: CTGAAGAAACTGAAGCGGCAAGAGGAGGAACAGGCT...AAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR CAA 90 bp TTTGACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGACTTGCAGCCCTGCTTaGGCAAAGTCTTCCCGGTTA +
Preference number: 5 (lower is better)
Translates to: FDSLLMPREDLLAQLPGMTCSPA*AKSSRL
Trigger: TAACCGGGAAGACTTTGCCAAAGCAGGGCTGCAAGT...CATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR CAA 90 bp GACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTACTTGCAGCCCTGCTTaGGCAAAGTCTTCCCGGTTA +
Preference number: 5 (lower is better)
Translates to: DSLLMPREDLLAQLPGMFTCSPA*AKSSRL
Trigger: TAACCGGGAAGACTTTGCCAAAGCAGGGCTGCAAGT...AAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR CAA 90 bp TTTGACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGCTCGGCATCATTGAGTaGCAGCTCATTCATGGCCCT +
Preference number: 5 (lower is better)
Translates to: FDSLLMPREDLLAQLPGMLGIIE*QLIHGP
Trigger: AGGGCCATGAATGAGCTGCAACTCAATGATGCCGAG...CATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR CAA 90 bp GGTCAGCATGATCTTCAGACACAGCACAGTGTTAGCGAGGGCTCCACTGCTCAGGCAAACTCGGCATCATaGAGTTGCAGCTCATTCATG +
Preference number: 5 (lower is better)
Translates to: GQHDLQTQHSVSEGSTAQANSAS*SCSSFM
Trigger: CATGAATGAGCTGCAACTCAATGATGCCGAGTTTGC...CTGAGCAGTGGAGCCCTCGCTAACACTGTGCTGTGTCTGAAGATCATGCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS-3UTR CAA 90 bp ACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTCAGTCTGTTGCAAACTCGGCATCATaGAGTTGCAGCTCATTCATG +
Preference number: 5 (lower is better)
Translates to: TGGSPCPAPRNVCPSQSVANSAS*SCSSFM
Trigger: CATGAATGAGCTGCAACTCAATGATGCCGAGTTTGC...AACAGACTGAGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CAA 90 bp TTTGACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGAGCTCCCAGGAATGTTaGCCCTTCTCAGTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: FDSLLMPREDLLAQLPGMSSQEC*PFSVCS
Trigger: GGAACAGACTGAGAAGGGCAAACATTCCTGGGAGCT...CATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR CAA 90 bp TTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGCCCTTCTGTTGATGAATTCCACTaGCAGCCCTGCTTTGGCAAA +
Preference number: 5 (lower is better)
Translates to: FNATGGSPCPAPRNVCPSVDEFH*QPCFGK
Trigger: TTTGCCAAAGCAGGGCTGCAAGTGGAATTCATCAAC...AGAAGGGCAAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000481889.6
ENST00000616973.4
CDS-3UTR CAA 90 bp GTGTTAGCGAGGGCTCCACTGCTCAGTAGCCACAAAACTCGCAACCCTTTGACTGCAAACTCGGCATCATaGAGTTGCAGCTCATTCATG +
Preference number: 5 (lower is better)
Translates to: VLARAPLLSSHKTRNPLTANSAS*SCSSFM
Trigger: CATGAATGAGCTGCAACTCAATGATGCCGAGTTTGC...AGTCAAAGGGTTGCGAGTTTTGTGGCTACTGAGCAGTGGAGCCCTCGCTAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441012.7
ENST00000616973.4
CDS TCA 90 bp CAAACTACTGGGCTGAAGCAATCAGGTTTCAGCTTCCTGAGTATCTaGGATTATGGGCGCACGCTACTGCTCCTGGCTCAGGACTATTCT +
Preference number: 5 (lower is better)
Translates to: QTTGLKQSGFSFLSI*DYGRTLLLLAQDYS
Trigger: AGAATAGTCCTGAGCCAGGAGCAGTAGCGTGCGCCCATAATCTCAGATACTCAGGAAGCTGAAACCTGATTGCTTCAGCCCAGTAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467728.5
CDS-3UTR CAA 90 bp TTTGACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGGTTGATGAATTCCACTaGCAGCCCTGCTTTGGCAAA +
Preference number: 5 (lower is better)
Translates to: FDSLLMPREDLLAQLPGMVDEFH*QPCFGK
Trigger: TTTGCCAAAGCAGGGCTGCAAGTGGAATTCATCAAC...CATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR CAA 90 bp GACTCTCTTTTAATGCCACGGGAGGATCTCCTTGCCCAGCTCCCAGGAATGTTTGTTGATGAATTCCACTaGCAGCCCTGCTTTGGCAAA +
Preference number: 5 (lower is better)
Translates to: DSLLMPREDLLAQLPGMFVDEFH*QPCFGK
Trigger: TTTGCCAAAGCAGGGCTGCAAGTGGAATTCATCAAC...AAACATTCCTGGGAGCTGGGCAAGGAGATCCTCCCGTGGCATTAAAAGAGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000441012.7
ENST00000467728.5
ENST00000616973.4
CDS-3UTR CAA 90 bp TTGCCCTTCTCAGTCTGTTCCACTTCTAGGAGGCAGCCACCAGGCCTCAGCCATTCAGCTAACATTTACTaGCCATATATTAGCCTGTAC +
Preference number: 5 (lower is better)
Translates to: LPFSVCSTSRRQPPGLSHSANIY*PYISLY
Trigger: GTACAGGCTAATATATGGCAAGTAAATGTTAGCTGA...ATGGCTGAGGCCTGGTGGCTGCCTCCTAGAAGTGGAACAGACTGAGAAGGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467728.5
CDS CCA 72 bp GGGAGGACTGGGCGGGTGCCTGCAAGGGCCAGGCACTaGAACCAGGGGAGAGGTGATCTGGGCGGGAGGCAA +
Preference number: 6 (lower is better)
Translates to: GRTGRVPARARH*NQGRGDLGGRQ
Trigger: TTGCCTCCCGCCCAGATCACCTCTCCCCTGGTTCCAGTGCCTGGCCCTTGCAGGCACCCGCCCAGTCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419652.5
CDS GCA 72 bp GCGCTGCTGACGGGCCTCCCGGCTATGGGGATCTGGTaGCATGGGCCAAGGCGTGACTCGAAGCCGGTCAGA +
Preference number: 6 (lower is better)
Translates to: ALLTGLPAMGIW*HGPRRDSKPVR
Trigger: TCTGACCGGCTTCGAGTCACGCCTTGGCCCATGGCACCAGATCCCCATAGCCGGGAGGCCCGTCAGCAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000441012.7
ENST00000467728.5
ENST00000481020.5
ENST00000481889.6
ENST00000527464.5
ENST00000529540.5
ENST00000616973.4
CDS GCA 72 bp CACAGCTCCACCGCAGAGTGGGTGCGTCCGGGCGGCTaGTTGCAGGTGCCACCCAGCGGGTTCCAGCTTGTT +
Preference number: 6 (lower is better)
Translates to: HSSTAEWVRPGG*LQVPPSGFQLV
Trigger: AACAAGCTGGAACCCGCTGGGTGGCACCTGCAAGCAGCCGCCCGGACGCACCCACTCTGCGGTGGAGCTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495866.5
ENST00000527464.5
ENST00000529540.5
ENST00000616973.4
CDS CAA 72 bp AGCTCCACCGCAGAGTGGGTGCGTCCGGGCGGCTGCTaGCAGGTGCCACCCAGCGGGTTCCAGCTTGTTTGC +
Preference number: 6 (lower is better)
Translates to: SSTAEWVRPGGC*QVPPSGFQLVC
Trigger: GCAAACAAGCTGGAACCCGCTGGGTGGCACCTGCAAGCAGCCGCCCGGACGCACCCACTCTGCGGTGGAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495866.5
ENST00000527464.5
ENST00000529540.5
ENST00000616973.4
CDS CCA 72 bp AAAGCGCTGCTGACGGGCCTCCCGGCTATGGGGATCTaGTGCCATGGGCCAAGGCGTGACTCGAAGCCGGTC +
Preference number: 6 (lower is better)
Translates to: KALLTGLPAMGI*CHGPRRDSKPV
Trigger: GACCGGCTTCGAGTCACGCCTTGGCCCATGGCACCAGATCCCCATAGCCGGGAGGCCCGTCAGCAGCGCTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000441012.7
ENST00000467728.5
ENST00000481020.5
ENST00000481889.6
ENST00000527464.5
ENST00000529540.5
ENST00000616973.4
CDS CCA 72 bp GCTGACGGGCCTCCCGGCTATGGGGATCTGGTGCCATaGGCCAAGGCTACCCAGGAGGGAAAAGGCAAAGCG +
Preference number: 6 (lower is better)
Translates to: ADGPPGYGDLVP*AKATQEGKGKA
Trigger: CGCTTTGCCTTTTCCCTCCTGGGTAGCCTTGGCCCATGGCACCAGATCCCCATAGCCGGGAGGCCCGTCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487913.5
CDS TCA 72 bp GGCGCAGCCGCCTCTCCCCAGGTGTGTCAAGTACCGTaGCTCGAAGCCGGTCAGAAAAGGAGCGCCGGTTAC +
Preference number: 6 (lower is better)
Translates to: GAAASPQVCQVP*LEAGQKRSAGY
Trigger: GTAACCGGCGCTCCTTTTCTGACCGGCTTCGAGTCACGGTACTTGACACACCTGGGGAGAGGCGGCTGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487913.5
CDS TCA 72 bp CGGGTTCCAGCTTGTTTGCTGCATAGATTACAACGGTaGTGGCGGGCAAGCGGTCCGGCTGGAGCCGGGCGG +
Preference number: 6 (lower is better)
Translates to: RVPACLLHRLQR*WRASGPAGAGR
Trigger: CCGCCCGGCTCCAGCCGGACCGCTTGCCCGCCATCACCGTTGTAATCTATGCAGCAAACAAGCTGGAACCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495866.5
ENST00000527464.5
ENST00000529540.5
ENST00000616973.4
CDS GCA 72 bp TTATGCTCCTCCGCCACAGCCAGACCACGACCCTCCTaGACGCAATCCCACCGAGACTGCGCCTTTTCCCCG +
Preference number: 6 (lower is better)
Translates to: LCSSATARPRPS*TQSHRDCAFSP
Trigger: CGGGGAAAAGGCGCAGTCTCGGTGGGATTGCGTGCAGGAGGGTCGTGGTCTGGCTGTGGCGGAGGAGCATAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000481020.5
ENST00000481889.6
CDS CCA 72 bp GACCCACCAAATCCCCAGGCCACCAGACTTCCTGGGTaGGCAGTCTCTGGAGCCCCCTTGCTGGGAGAAGAG +
Preference number: 6 (lower is better)
Translates to: DPPNPQATRLPG*AVSGAPLLGEE
Trigger: CTCTTCTCCCAGCAAGGGGGCTCCAGAGACTGCCCACCCAGGAAGTCTGGTGGCCTGGGGATTTGGTGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000419652.5
ENST00000437276.1
ENST00000457932.5
ENST00000467728.5
ENST00000486991.1
CDS CCA 72 bp ACTCAGCTGGCCAACTCTCTAGCAGCAAATCCAGACTaGGGAGGACTGGGCGGGTGCCTGCAAGGGCCAGGC +
Preference number: 6 (lower is better)
Translates to: TQLANSLAANPD*GGLGGCLQGPG
Trigger: GCCTGGCCCTTGCAGGCACCCGCCCAGTCCTCCCCAGTCTGGATTTGCTGCTAGAGAGTTGGCCAGCTGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419652.5
CDS CAA 90 bp CCCCAGGCCACCAGACTTCCTGGGTGGGCAGTCTCTGGAGCCCCCTaGCTGGGAGAAGAGGATGGTGCAGTTTCCTGTCCAGAAGTCTCG +
Preference number: 6 (lower is better)
Translates to: PQATRLPGWAVSGAP*LGEEDGAVSCPEVS
Trigger: CGAGACTTCTGGACAGGAAACTGCACCATCCTCTTCTCCCAGCAAGGGGGCTCCAGAGACTGCCCACCCAGGAAGTCTGGTGGCCTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000405853.7
ENST00000419652.5
ENST00000420369.5
ENST00000436029.5
ENST00000437276.1
ENST00000441012.7
ENST00000444396.5
ENST00000449369.5
ENST00000457932.5
ENST00000461778.5
ENST00000467728.5
ENST00000476086.6
ENST00000486991.1
ENST00000525441.5
CDS TCA 72 bp GCAGTTTCCTGTCCAGAAGTCTCGGTGGCCAGCCAGTaGGCTGGAGCTGAGCACAAGCAGGACCCAGCGCTC +
Preference number: 6 (lower is better)
Translates to: AVSCPEVSVASQ*AGAEHKQDPAL
Trigger: GAGCGCTGGGTCCTGCTTGTGCTCAGCTCCAGCTCACTGGCTGGCCACCGAGACTTCTGGACAGGAAACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000419652.5
ENST00000449369.5
ENST00000457932.5
ENST00000486991.1
CDS TCA 72 bp GCAGTTTCCTGTCCAGAAGTCTCGGTGGCCAGCCAGTaGGCTGGAGCTGAGCACAAGCAGGACCTGGAGCCC +
Preference number: 6 (lower is better)
Translates to: AVSCPEVSVASQ*AGAEHKQDLEP
Trigger: GGGCTCCAGGTCCTGCTTGTGCTCAGCTCCAGCTCACTGGCTGGCCACCGAGACTTCTGGACAGGAAACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000436029.5
ENST00000437276.1
ENST00000461778.5
ENST00000467728.5
ENST00000525441.5
CDS TCA 72 bp TTAGGCGGCGGTAGAGTCAAGACTCCAACCCTCCTCTaGCTCCAAAGTCTGGGCTCCCAGCCACCGTGCCGG +
Preference number: 6 (lower is better)
Translates to: LGGGRVKTPTLL*LQSLGSQPPCR
Trigger: CCGGCACGGTGGCTGGGAGCCCAGACTTTGGAGTCAGAGGAGGGTTGGAGTCTTGACTCTACCGCCGCCTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467728.5
CDS TCA 72 bp CTGTGCGCCTGGCTTCCACAGCTCCACCGCAGAGTCTaGGCTCCAAAAGAGAGGCACAAGGGGGTCTCAGGC +
Preference number: 6 (lower is better)
Translates to: LCAWLPQLHRRV*APKERHKGVSG
Trigger: GCCTGAGACCCCCTTGTGCCTCTCTTTTGGAGCTCAGACTCTGCGGTGGAGCTGTGGAAGCCAGGCGCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483882.1
CDS CCA 72 bp CACTGTCCAAATCCCCAGGCCACCAGACTTCCTGGGTaGGCAGTCTCTGGAGCCCCCTTGCTGGGAGAAGAG +
Preference number: 6 (lower is better)
Translates to: HCPNPQATRLPG*AVSGAPLLGEE
Trigger: CTCTTCTCCCAGCAAGGGGGCTCCAGAGACTGCCCACCCAGGAAGTCTGGTGGCCTGGGGATTTGGACAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000405853.7
ENST00000420369.5
ENST00000441012.7
ENST00000444396.5
ENST00000449369.5
ENST00000525441.5
CDS CCA 72 bp GGCCCCCAGCCACAAGGACATCTCTTCCTGGAGCCCTaGTCATTACCAAGGCACTGTCACAGAGCCCCAGGC +
Preference number: 6 (lower is better)
Translates to: GPQPQGHLFLEP*SLPRHCHRAPG
Trigger: GCCTGGGGCTCTGTGACAGTGCCTTGGTAATGACCAGGGCTCCAGGAAGAGATGTCCTTGTGGCTGGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419652.5
ENST00000457932.5
ENST00000530310.1
CDS CCA 72 bp ATCCTCCCAAATCCCCAGGCCACCAGACTTCCTGGGTaGGCAGTCTCTGGAGCCCCCTTGCTGGGAGAAGAG +
Preference number: 6 (lower is better)
Translates to: ILPNPQATRLPG*AVSGAPLLGEE
Trigger: CTCTTCTCCCAGCAAGGGGGCTCCAGAGACTGCCCACCCAGGAAGTCTGGTGGCCTGGGGATTTGGGAGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000436029.5
ENST00000461778.5
CDS CCA 72 bp GGCCCCCAGCCACAAGGACATCTCTTCCTGGAGCCCTaGTCATTACCAAGGCAACAGAGCCCCAGGCCACTG +
Preference number: 6 (lower is better)
Translates to: GPQPQGHLFLEP*SLPRQQSPRPL
Trigger: CAGTGGCCTGGGGCTCTGTTGCCTTGGTAATGACCAGGGCTCCAGGAAGAGATGTCCTTGTGGCTGGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437276.1
CDS CCA 72 bp GCAGAGTCAAATCCCCAGGCCACCAGACTTCCTGGGTaGGCAGTCTCTGGAGCCCCCTTGCTGGGAGAAGAG +
Preference number: 6 (lower is better)
Translates to: AESNPQATRLPG*AVSGAPLLGEE
Trigger: CTCTTCTCCCAGCAAGGGGGCTCCAGAGACTGCCCACCCAGGAAGTCTGGTGGCCTGGGGATTTGACTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476086.6
CDS CAA 72 bp GAGGCCGATTCTCCTCATCCCTGCTTCCCAGCAGATTaGGCTCTCCCAGCTCGATGTCTGGAGGCCCCTCCC +
Preference number: 6 (lower is better)
Translates to: EADSPHPCFPAD*ALPARCLEAPP
Trigger: GGGAGGGGCCTCCAGACATCGAGCTGGGAGAGCCAAATCTGCTGGGAAGCAGGGATGAGGAGAATCGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481020.5
ENST00000481889.6
ENST00000487913.5
CDS CAA 90 bp GGTGCCATGGGCCAAGGCTACCCAGGAGGGAAAAGGCAAAGCGCTTaGAGTCGGACATCAAGAAGCCCACTGGTGATCTGGGCGCAGCCG +
Preference number: 6 (lower is better)
Translates to: GAMGQGYPGGKRQSA*SRTSRSPLVIWAQP
Trigger: CGGCTGCGCCCAGATCACCAGTGGGCTTCTTGATGTCCGACTCAAAGCGCTTTGCCTTTTCCCTCCTGGGTAGCCTTGGCCCATGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487913.5
CDS TCA 72 bp TCCAGAAGTCTCGGTGGCCAGCCAGTGAGCTGGAGCTaGGCACAAGCAGGACCCAGCGCTCTTAGCAGCTCT +
Preference number: 6 (lower is better)
Translates to: SRSLGGQPVSWS*AQAGPSALSSS
Trigger: AGAGCTGCTAAGAGCGCTGGGTCCTGCTTGTGCTCAGCTCCAGCTCACTGGCTGGCCACCGAGACTTCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000419652.5
ENST00000449369.5
ENST00000457932.5
ENST00000486991.1
CDS TCA 72 bp TCCAGAAGTCTCGGTGGCCAGCCAGTGAGCTGGAGCTaGGCACAAGCAGGACCTCGTGGAGCAAAGGTCCCA +
Preference number: 6 (lower is better)
Translates to: SRSLGGQPVSWS*AQAGPRGAKVP
Trigger: TGGGACCTTTGCTCCACGAGGTCCTGCTTGTGCTCAGCTCCAGCTCACTGGCTGGCCACCGAGACTTCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444396.5
CDS TCA 72 bp GCAGTTTCCTGTCCAGAAGTCTCGGTGGCCAGCCAGTaGGCTGGAGCTGAGCACAAGCAGGACCTCGTGGAG +
Preference number: 6 (lower is better)
Translates to: AVSCPEVSVASQ*AGAEHKQDLVE
Trigger: CTCCACGAGGTCCTGCTTGTGCTCAGCTCCAGCTCACTGGCTGGCCACCGAGACTTCTGGACAGGAAACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444396.5
CDS CCA 72 bp GGCACAGGGGCCCCCAGCCACAAGGACATCTCTTCCTaGAGCCCTGGTCATTACCAAGGCACTGTCACAGAG +
Preference number: 6 (lower is better)
Translates to: GTGAPSHKDISS*SPGHYQGTVTE
Trigger: CTCTGTGACAGTGCCTTGGTAATGACCAGGGCTCCAGGAAGAGATGTCCTTGTGGCTGGGGGCCCCTGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419652.5
ENST00000457932.5
ENST00000530310.1
CDS CCA 72 bp AGGCCGATTCTCCTCATCCCTGCTTCCCAGCAGATTTaGCTCTCCCAGCTCGATGTCTGGAGGCCCCTCCCA +
Preference number: 6 (lower is better)
Translates to: RPILLIPASQQI*LSQLDVWRPLP
Trigger: TGGGAGGGGCCTCCAGACATCGAGCTGGGAGAGCCAAATCTGCTGGGAAGCAGGGATGAGGAGAATCGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481020.5
ENST00000481889.6
ENST00000487913.5
CDS CAA 72 bp GCAGCAAACCTCAAACGGGGACTAGGAGGGCTGGTCTaGGAGCATGGCCTCTTCCAGGGAGGCCGATTCTCC +
Preference number: 6 (lower is better)
Translates to: AANLKRGLGGLV*EHGLFQGGRFS
Trigger: GGAGAATCGGCCTCCCTGGAAGAGGCCATGCTCCAAGACCAGCCCTCCTAGTCCCCGTTTGAGGTTTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481020.5
ENST00000481889.6
ENST00000487913.5
CDS CAA 72 bp CCGCCCACCCGGGCCCGGAGTCTGCGCTTCGTTACCTaGGTAATGAGAGATGGGCTCACCAAAGACTTCCCT +
Preference number: 6 (lower is better)
Translates to: PPTRARSLRFVT*VMRDGLTKDFP
Trigger: AGGGAAGTCTTTGGTGAGCCCATCTCTCATTACCAAGGTAACGAAGCGCAGACTCCGGGCCCGGGTGGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495866.5
ENST00000527464.5
ENST00000616973.4
CDS CAA 90 bp AGGCGTGACTCGAAGCCGGTCAGAAAAGGAGCGCCGGTTACACTGTaGCTGGGCAGCGACGAGCTTCTCGATCATGCCCAGTTGTTCCGG +
Preference number: 6 (lower is better)
Translates to: RRDSKPVRKGAPVTL*LGSDELLDHAQLFR
Trigger: CCGGAACAACTGGGCATGATCGAGAAGCTCGTCGCTGCCCAGCAACAGTGTAACCGGCGCTCCTTTTCTGACCGGCTTCGAGTCACGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395397.7
ENST00000441012.7
ENST00000467728.5
ENST00000481020.5
ENST00000481889.6
ENST00000527464.5
ENST00000529540.5
ENST00000616973.4
CDS CAA 90 bp CACCGTGACTCGAAGCCGGTCAGAAAAGGAGCGCCGGTTACACTGTaGCTGGGCAGCGACGAGCTTCTCGATCATGCCCAGTTGTTCCGG +
Preference number: 6 (lower is better)
Translates to: HRDSKPVRKGAPVTL*LGSDELLDHAQLFR
Trigger: CCGGAACAACTGGGCATGATCGAGAAGCTCGTCGCTGCCCAGCAACAGTGTAACCGGCGCTCCTTTTCTGACCGGCTTCGAGTCACGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000527949.1
ENST00000531660.5
CDS GCA 72 bp CGAAGCCGGTCAGAAAAGGAGCGCCGGTTACACTGTTaGTGGGCAGCGACGAGCTTCTCGATCATGCCCAGT +
Preference number: 6 (lower is better)
Translates to: RSRSEKERRLHC*WAATSFSIMPS
Trigger: ACTGGGCATGATCGAGAAGCTCGTCGCTGCCCAGCAACAGTGTAACCGGCGCTCCTTTTCTGACCGGCTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481020.5
ENST00000481889.6
ENST00000487913.5
ENST00000527464.5
ENST00000527949.1
ENST00000529540.5
ENST00000531660.5
ENST00000616973.4
CDS GCA 72 bp GGGAGCTTTTTGTCCTGCAGACGCAGTGCAAACACTTaGTCTGAGTGGACGCTGCTCAGGGTCCGGAGGCTC +
Preference number: 6 (lower is better)
Translates to: GSFLSCRRSANT*SEWTLLRVRRL
Trigger: GAGCCTCCGGACCCTGAGCAGCGTCCACTCAGAGCAAGTGTTTGCACTGCGTCTGCAGGACAAAAAGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000462051.5
ENST00000467728.5
ENST00000481020.5
ENST00000481889.6
ENST00000494018.1
ENST00000527949.1
ENST00000529540.5
ENST00000532630.1
ENST00000616973.4
CDS GCA 72 bp AGTCTCTGGAGCCCCCTTGCTGGGAGAAGAGGATGGTaGAGTTTCCTGTCCAGAAGTCTCGGTGGCCAGCCA +
Preference number: 6 (lower is better)
Translates to: SLWSPLAGRRGW*SFLSRSLGGQP
Trigger: TGGCTGGCCACCGAGACTTCTGGACAGGAAACTGCACCATCCTCTTCTCCCAGCAAGGGGGCTCCAGAGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000405853.7
ENST00000419652.5
ENST00000420369.5
ENST00000436029.5
ENST00000437276.1
ENST00000441012.7
ENST00000444396.5
ENST00000449369.5
ENST00000457932.5
ENST00000461778.5
ENST00000467728.5
ENST00000476086.6
ENST00000486991.1
ENST00000525441.5
CDS CAA 72 bp TCGAAGCCGGTCAGAAAAGGAGCGCCGGTTACACTGTaGCTGGGCAGCGACGAGCTTCTCGATCATGCCCAG +
Preference number: 6 (lower is better)
Translates to: SKPVRKGAPVTL*LGSDELLDHAQ
Trigger: CTGGGCATGATCGAGAAGCTCGTCGCTGCCCAGCAACAGTGTAACCGGCGCTCCTTTTCTGACCGGCTTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481020.5
ENST00000481889.6
ENST00000487913.5
ENST00000527464.5
ENST00000527949.1
ENST00000529540.5
ENST00000531660.5
ENST00000616973.4
CDS CAA 90 bp TGCACACAAGCAGCAAACCTCAAACGGGGACTAGGAGGGCTGGTCTaGGAGCATGGCCTCTTCCAGGGAGGCCGATTCTCCTCATCCCTG +
Preference number: 6 (lower is better)
Translates to: CTQAANLKRGLGGLV*EHGLFQGGRFSSSL
Trigger: CAGGGATGAGGAGAATCGGCCTCCCTGGAAGAGGCCATGCTCCAAGACCAGCCCTCCTAGTCCCCGTTTGAGGTTTGCTGCTTGTGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481020.5
ENST00000481889.6
ENST00000487913.5
CDS CAA 90 bp TACCGTGACTCGAAGCCGGTCAGAAAAGGAGCGCCGGTTACACTGTaGCTGGGCAGCGACGAGCTTCTCGATCATGCCCAGTTGTTCCGG +
Preference number: 6 (lower is better)
Translates to: YRDSKPVRKGAPVTL*LGSDELLDHAQLFR
Trigger: CCGGAACAACTGGGCATGATCGAGAAGCTCGTCGCTGCCCAGCAACAGTGTAACCGGCGCTCCTTTTCTGACCGGCTTCGAGTCACGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487913.5
CDS CAA 90 bp GTGGTGATGCCGCCCACCCGGGCCCGGAGTCTGCGCTTCGTTACCTaGGTAATGAGAGATGGGCTCACCAAAGACTTCCCTGAAGCTGTA +
Preference number: 6 (lower is better)
Translates to: VVMPPTRARSLRFVT*VMRDGLTKDFPEAV
Trigger: TACAGCTTCAGGGAAGTCTTTGGTGAGCCCATCTCTCATTACCAAGGTAACGAAGCGCAGACTCCGGGCCCGGGTGGGCGGCATCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495866.5
ENST00000527464.5
ENST00000616973.4
CDS CAA 90 bp CCACCGATTCCTGTGGGACCTGCAGCCCTCCTTGGTGTAAGTCTCTaGCTGTTTCCCATTGCCCCTCCTCCACACCTGCAGAGAAGATGC +
Preference number: 6 (lower is better)
Translates to: PPIPVGPAALLGVSL*LFPIAPPPHLQRRC
Trigger: GCATCTTCTCTGCAGGTGTGGAGGAGGGGCAATGGGAAACAGCAAGAGACTTACACCAAGGAGGGCTGCAGGTCCCACAGGAATCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462051.5
CDS CAA 90 bp TCTTCCAGGGAGGCCGATTCTCCTCATCCCTGCTTCCCAGCAGATTaGGCTCTCCCAGCTCGATGTCTGGAGGCCCCTCCCACAGATAAT +
Preference number: 6 (lower is better)
Translates to: SSREADSPHPCFPAD*ALPARCLEAPPTDN
Trigger: ATTATCTGTGGGAGGGGCCTCCAGACATCGAGCTGGGAGAGCCAAATCTGCTGGGAAGCAGGGATGAGGAGAATCGGCCTCCCTGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481020.5
ENST00000481889.6
ENST00000487913.5
CDS TCA 72 bp TGCACGTTGGGCCGGTCTATAGGTCACCAAGAGAGTTaGGGAGCAGGTCTGGCCAGGGTCCAGTTCCATACC +
Preference number: 6 (lower is better)
Translates to: CTLGRSIGHQES*GAGLARVQFHT
Trigger: GGTATGGAACTGGACCCTGGCCAGACCTGCTCCTCAACTCTCTTGGTGACCTATAGACCGGCCCAACGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462051.5
ENST00000494018.1
CDS GCA 72 bp TGCTTGCAGGTGCCACCCAGCGGGTTCCAGCTTGTTTaGTGCATAGATTACAACGGTGATGGCGGGCAAGCG +
Preference number: 6 (lower is better)
Translates to: CLQVPPSGFQLV*CIDYNGDGGQA
Trigger: CGCTTGCCCGCCATCACCGTTGTAATCTATGCAGCAAACAAGCTGGAACCCGCTGGGTGGCACCTGCAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495866.5
ENST00000527464.5
ENST00000529540.5
ENST00000616973.4
CDS CCA 72 bp AGCCGGTCAGAAAAGGAGCGCCGGTTACACTGTTGCTaGGCAGCGACGAGCTTCTCGATCATGCCCAGTTGT +
Preference number: 6 (lower is better)
Translates to: SRSEKERRLHCC*AATSFSIMPSC
Trigger: ACAACTGGGCATGATCGAGAAGCTCGTCGCTGCCCAGCAACAGTGTAACCGGCGCTCCTTTTCTGACCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481020.5
ENST00000481889.6
ENST00000487913.5
ENST00000527464.5
ENST00000527949.1
ENST00000529540.5
ENST00000531660.5
ENST00000616973.4
CDS CCA 72 bp AAGAGGATGGTGCAGTTTCCTGTCCAGAAGTCTCGGTaGCCAGCCAGTGAGCTGGAGCTGAGCACAAGCAGG +
Preference number: 6 (lower is better)
Translates to: KRMVQFPVQKSR*PASELELSTSR
Trigger: CCTGCTTGTGCTCAGCTCCAGCTCACTGGCTGGCCACCGAGACTTCTGGACAGGAAACTGCACCATCCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000405853.7
ENST00000419652.5
ENST00000420369.5
ENST00000436029.5
ENST00000437276.1
ENST00000441012.7
ENST00000444396.5
ENST00000449369.5
ENST00000457932.5
ENST00000461778.5
ENST00000467728.5
ENST00000486991.1
ENST00000525441.5
CDS CCA 72 bp CCAGCCAGTGAGCTGGAGCTGAGCACAAGCAGGACCTaGAGCCCCAGAGAAGTAGCAATTTGGGGAAAGGCT +
Preference number: 6 (lower is better)
Translates to: PASELELSTSRT*SPREVAIWGKA
Trigger: AGCCTTTCCCCAAATTGCTACTTCTCTGGGGCTCCAGGTCCTGCTTGTGCTCAGCTCCAGCTCACTGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461778.5
CDS CCA 72 bp GCTTCCCAGCAGATTTGGCTCTCCCAGCTCGATGTCTaGAGGCCCCTCCCACAGATAATCCCACTCTGCTTC +
Preference number: 6 (lower is better)
Translates to: ASQQIWLSQLDV*RPLPQIIPLCF
Trigger: GAAGCAGAGTGGGATTATCTGTGGGAGGGGCCTCCAGACATCGAGCTGGGAGAGCCAAATCTGCTGGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481020.5
ENST00000481889.6
ENST00000487913.5
CDS GCA 72 bp TATGTGTGCTGCAGCCTCTCTACCTGGAGCTGGTCCTaGACGTTGGGCCGGTCTATAGGTCACCAAGAGAGT +
Preference number: 6 (lower is better)
Translates to: YVCCSLSTWSWS*TLGRSIGHQES
Trigger: ACTCTCTTGGTGACCTATAGACCGGCCCAACGTGCAGGACCAGCTCCAGGTAGAGAGGCTGCAGCACACATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462051.5
ENST00000494018.1
CDS CAA 72 bp GGCCAAGGCTACCCAGGAGGGAAAAGGCAAAGCGCTTaGAGTCGGACATCAAGAAGCCCACTGGTGATCTGG +
Preference number: 6 (lower is better)
Translates to: GQGYPGGKRQSA*SRTSRSPLVIW
Trigger: CCAGATCACCAGTGGGCTTCTTGATGTCCGACTCAAAGCGCTTTGCCTTTTCCCTCCTGGGTAGCCTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487913.5
CDS TCA 72 bp AATTCACATAGAGGACCTCCTCCCCTGAGCCCCTCATaGGTTATTCTGGGACCCAGAGTCCTGCTCCTGTCC +
Preference number: 6 (lower is better)
Translates to: NSHRGPPPLSPS*VILGPRVLLLS
Trigger: GGACAGGAGCAGGACTCTGGGTCCCAGAATAACTCATGAGGGGCTCAGGGGAGGAGGTCCTCTATGTGAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467728.5
ENST00000486991.1
CDS TCA 72 bp CTCACTCCAACACTGAGGACAGCTCACTCCACCCAGTaGAACACGCTGCTTATTAGAGAACCTCGCTCGTGC +
Preference number: 6 (lower is better)
Translates to: LTPTLRTAHSTQ*NTLLIREPRSC
Trigger: GCACGAGCGAGGTTCTCTAATAAGCAGCGTGTTTCACTGGGTGGAGTGAGCTGTCCTCAGTGTTGGAGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467728.5
ENST00000486991.1
CDS TCA 72 bp GGGCTGAAGCAATCAGGTTTCAGCTTCCTGAGTATCTaGGATTATGGGCGCACGCTACTGCTCCTGGCTCAG +
Preference number: 6 (lower is better)
Translates to: GLKQSGFSFLSI*DYGRTLLLLAQ
Trigger: CTGAGCCAGGAGCAGTAGCGTGCGCCCATAATCTCAGATACTCAGGAAGCTGAAACCTGATTGCTTCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467728.5
CDS GCA 72 bp GCAGGTCTGGCCAGGGTCCAGTTCCATACCCCAAATTaGAACCAAAATATAGAGACATGCTCCAGCCAAGCT +
Preference number: 6 (lower is better)
Translates to: AGLARVQFHTPN*NQNIETCSSQA
Trigger: AGCTTGGCTGGAGCATGTCTCTATATTTTGGTTGCAATTTGGGGTATGGAACTGGACCCTGGCCAGACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462051.5
ENST00000494018.1
CDS CCA 72 bp GCAATCAGGTTTCAGCTTCCTGAGTATCTGAGATTATaGGCGCACGCTACTGCTCCTGGCTCAGGACTATTC +
Preference number: 6 (lower is better)
Translates to: AIRFQLPEYLRL*AHATAPGSGLF
Trigger: GAATAGTCCTGAGCCAGGAGCAGTAGCGTGCGCCCATAATCTCAGATACTCAGGAAGCTGAAACCTGATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467728.5
CDS CAA 72 bp ATGCTGATAGCAATGAGCAAGGCAAACTCGGCATCATaGAGTTGCAGCTCATTCATGGCCCTGGAGAACTCG +
Preference number: 6 (lower is better)
Translates to: MLIAMSKANSAS*SCSSFMALENS
Trigger: CGAGTTCTCCAGGGCCATGAATGAGCTGCAACTCAATGATGCCGAGTTTGCCTTGCTCATTGCTATCAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481020.5
ENST00000481889.6
ENST00000527949.1
ENST00000529540.5
ENST00000532630.1
ENST00000616973.4
CDS GCA 72 bp ATAGCAATGAGCAAGGCAAACTCGGCATCATTGAGTTaGAGCTCATTCATGGCCCTGGAGAACTCGAAGATG +
Preference number: 6 (lower is better)
Translates to: IAMSKANSASLS*SSFMALENSKM
Trigger: CATCTTCGAGTTCTCCAGGGCCATGAATGAGCTGCAACTCAATGATGCCGAGTTTGCCTTGCTCATTGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000395397.7
ENST00000405576.5
ENST00000405853.7
ENST00000407404.5
ENST00000441012.7
ENST00000467728.5
ENST00000481020.5
ENST00000481889.6
ENST00000527949.1
ENST00000529540.5
ENST00000532630.1
ENST00000616973.4
CDS GCA 72 bp ATGTTGCCCAGGCTGGAACTCAGTGCTATTCACAGGTaGAATAATAGGACACTATCGCCTCAAACTACTGGG +
Preference number: 6 (lower is better)
Translates to: MLPRLELSAIHR*NNRTLSPQTTG
Trigger: CCCAGTAGTTTGAGGCGATAGTGTCCTATTATTGCACCTGTGAATAGCACTGAGTTCCAGCCTGGGCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467728.5
CDS CAA 72 bp CCTGGTCATTACCAAGGCACTGTCTCTATTTGCTTCTaGGCCTCCTCCATGACAACTCTGGAAGCAAAGTTT +
Preference number: 6 (lower is better)
Translates to: PGHYQGTVSICF*ASSMTTLEAKF
Trigger: AAACTTTGCTTCCAGAGTTGTCATGGAGGAGGCCAAGAAGCAAATAGAGACAGTGCCTTGGTAATGACCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436778.5