RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NR1D2 (Homo sapiens)

Ensembl gene IDs: ENSG00000174738

Ensembl transcript IDs: ENST00000312521.9, ENST00000383773.8, ENST00000468700.1, ENST00000472780.1, ENST00000492552.5

Found 242 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTCTCCAGTTTAAGTGCGACACAGCTGATTGGTCTATCAGGGAGATaGAGTCAACGTCTAATCATGGCTGAAGAGTTCTCAATCCGAACA +
Preference number: 1 (lower is better)
Translates to: FSSLSATQLIGLSGR*SQRLIMAEEFSIRT
Trigger: TGTTCGGATTGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAATCAGCTGTGTCGCACTTAAACTGGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
3UTR TCA 90 bp GCTGATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTaGAGAGTTCTCAATCCGAACAGCTATTGCATGATTACAGAGATA +
Preference number: 1 (lower is better)
Translates to: ADWSIREMQSTSNHG*RVLNPNSYCMITEI
Trigger: TATCTCTGTAATCATGCAATAGCTGTTCGGATTGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAATCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
3UTR TCA 90 bp GTGAAGCTCATCGAAAATTCTTCCCAGATTTCATGTCCTGATTTATaGGGATCCACATATGGAGACTTACTCATTGGACAAACCTGTCAG +
Preference number: 1 (lower is better)
Translates to: VKLIENSSQISCPDL*GSTYGDLLIGQTCQ
Trigger: CTGACAGGTTTGTCCAATGAGTAAGTCTCCATATGTGGATCCTCATAAATCAGGACATGAAATCTGGGAAGAATTTTCGATGAGCTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
3UTR TCA 90 bp CAGGAATACGCTTTGCAAATTCCACCACTTCTTTCACTGCTGGAGTaGAGCTCATCGAAAATTCTTCCCAGATTTCATGTCCTGATTTAT +
Preference number: 1 (lower is better)
Translates to: QEYALQIPPLLSLLE*SSSKILPRFHVLIY
Trigger: ATAAATCAGGACATGAAATCTGGGAAGAATTTTCGATGAGCTTCACTCCAGCAGTGAAAGAAGTGGTGGAATTTGCAAAGCGTATTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
3UTR GCA 90 bp TGGTTTTTCATTATTAAGGTCCTTAGTGCACGAATGAGAGTTTCCTaGAAAGCCTCCACAGAGTTGACGTTTTCTATTCCAGATCGATCT +
Preference number: 1 (lower is better)
Translates to: WFFIIKVLSARMRVS*KASTELTFSIPDRS
Trigger: AGATCGATCTGGAATAGAAAACGTCAACTCTGTGGAGGCTTTGCAGGAAACTCTCATTCGTGCACTAAGGACCTTAATAATGAAAAACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383773.8
3UTR TCA 90 bp TTGAGTGTAAATCATCCACACTATATTTCTTTCCACTTAAAAAGGTaGCAGTACGTTCCTTTGCATCAAATAATGATGCGAACCGTACCA +
Preference number: 1 (lower is better)
Translates to: LSVNHPHYISFHLKR*QYVPLHQIMMRTVP
Trigger: TGGTACGGTTCGCATCATTATTTGATGCAAAGGAACGTACTGTCACCTTTTTAAGTGGAAAGAAATATAGTGTGGATGATTTACACTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383773.8
3UTR-3UTR CCA 90 bp AACTTCTCCAGTTTAAGTGCGACACAGCTGATTGGTCTATCAGGGAGATGCAGTAGTAACTCTGTGAGGTaGGGCATTGGGGACACCATC +
Preference number: 2 (lower is better)
Translates to: NFSSLSATQLIGLSGRCSSNSVR*GIGDTI
Trigger: GATGGTGTCCCCAATGCCCCACCTCACAGAGTTACT...ACTGCATCTCCCTGATAGACCAATCAGCTGTGTCGCACTTAAACTGGAGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
3UTR-3UTR TCA 90 bp AACTTCTCCAGTTTAAGTGCGACACAGCTGATTGGTCTATCAGGGAGATGCAGTGCTGAGAGAGATCTCTaGACCCAGGAATACGCTTTG +
Preference number: 2 (lower is better)
Translates to: NFSSLSATQLIGLSGRCSAERDL*TQEYAL
Trigger: CAAAGCGTATTCCTGGGTTCAGAGATCTCTCTCAGC...ACTGCATCTCCCTGATAGACCAATCAGCTGTGTCGCACTTAAACTGGAGAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383773.8
3UTR-3UTR CCA 90 bp AACTTCTCCAGTTTAAGTGCGACACAGCTGATTGGTCTATCAGGGAGATGCAGTTGCGACACAGCTGATTaGTCTATCAGGGAGATGCAG +
Preference number: 2 (lower is better)
Translates to: NFSSLSATQLIGLSGRCSCDTAD*SIREMQ
Trigger: CTGCATCTCCCTGATAGACCAATCAGCTGTGTCGCA...ACTGCATCTCCCTGATAGACCAATCAGCTGTGTCGCACTTAAACTGGAGAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
3UTR CAA 90 bp GTCCTTAGTGCACGAATGAGAGTTTCCTGCAAAGCCTCCACAGAGTaGACGTTTTCTATTCCAGATCGATCTGCAGATACCAGGACAACA +
Preference number: 2 (lower is better)
Translates to: VLSARMRVSCKASTE*TFSIPDRSADTRTT
Trigger: TGTTGTCCTGGTATCTGCAGATCGATCTGGAATAGAAAACGTCAACTCTGTGGAGGCTTTGCAGGAAACTCTCATTCGTGCACTAAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
3UTR-3UTR TCA 90 bp CTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTTCTCAATCCGAACGTCTAATCATGGCTaGAGAGTTCTCAATCCGAAC +
Preference number: 2 (lower is better)
Translates to: LSGRCSQRLIMAEEFSIRTSNHG*RVLNPN
Trigger: GTTCGGATTGAGAACTCTTCAGCCATGATTAGACGT...TCGGATTGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
3UTR-3UTR TCA 90 bp ATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTTCTCACAGCCTTTAAAAGGTTaGCCTGGTCATGCTGAGAGA +
Preference number: 2 (lower is better)
Translates to: IGLSGRCSQRLIMAEEFSQPLKG*PGHAER
Trigger: TCTCTCAGCATGACCAGGTCAACCTTTTAAAGGCTG...TGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
3UTR-3UTR GCA 90 bp ATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTTCTCACGAATGAGAGTTTCCTaGAAAGCCTCCACAGAGTTG +
Preference number: 2 (lower is better)
Translates to: IGLSGRCSQRLIMAEEFSRMRVS*KASTEL
Trigger: CAACTCTGTGGAGGCTTTGCAGGAAACTCTCATTCG...TGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383773.8
3UTR-3UTR TCA 90 bp ATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTTCTCAACGTCTAATCATGGCTaGAGAGTTCTCAATCCGAAC +
Preference number: 2 (lower is better)
Translates to: IGLSGRCSQRLIMAEEFSTSNHG*RVLNPN
Trigger: GTTCGGATTGAGAACTCTTCAGCCATGATTAGACGT...TGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
3UTR-3UTR TCA 90 bp ATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTTCTCAATGGTTGGTGTGGACTaGAATGATTTCCCAGAAAGG +
Preference number: 2 (lower is better)
Translates to: IGLSGRCSQRLIMAEEFSMVGVD*NDFPER
Trigger: CCTTTCTGGGAAATCATTTCAGTCCACACCAACCAT...TGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
3UTR-3UTR TCA 90 bp ATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTTCTCAATATGGCAGGAACCCTaGATAATATGGTTGGTGTGG +
Preference number: 2 (lower is better)
Translates to: IGLSGRCSQRLIMAEEFSIWQEP*IIWLVW
Trigger: CCACACCAACCATATTATTCAGGGTTCCTGCCATAT...TGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
3UTR-3UTR CCA 90 bp CAGCTGATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTGGAGACTTACTCATTaGACAAACCTGTCAGTAGAA +
Preference number: 2 (lower is better)
Translates to: QLIGLSGRCSQRLIMAEEWRLTH*TNLSVE
Trigger: TTCTACTGACAGGTTTGTCCAATGAGTAAGTCTCCA...CTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAATCAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383773.8
3UTR-3UTR TCA 90 bp CACAGAGTTGACGTTTTCTATTCCAGATCGATCTGCAGATACCAGGACAACAGCCCAGATTTCATGTCCTaGTTTATGAGGATCCACATA +
Preference number: 2 (lower is better)
Translates to: HRVDVFYSRSICRYQDNSPDFMS*FMRIHI
Trigger: TATGTGGATCCTCATAAATCAGGACATGAAATCTGG...GCTGTTGTCCTGGTATCTGCAGATCGATCTGGAATAGAAAACGTCAACTCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
3UTR-3UTR GCA 90 bp AACTTCTCCAGTTTAAGTGCGACACAGCTGATTGGTCTATCAGGGAGATGCAGTAATCCGAACAGCTATTaGATGATTACAGAGATAGCC +
Preference number: 2 (lower is better)
Translates to: NFSSLSATQLIGLSGRCSNPNSY*MITEIA
Trigger: GGCTATCTCTGTAATCATGCAATAGCTGTTCGGATT...ACTGCATCTCCCTGATAGACCAATCAGCTGTGTCGCACTTAAACTGGAGAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
3UTR-3UTR GCA 90 bp TTAGCAGATCCCCTGCTCCCATTGAGTGTAAATCATCCACACTATATTTCTTTCCACCACTTCTTTCACTaGTGGAGTGAAGCTCATCGA +
Preference number: 2 (lower is better)
Translates to: LADPLLPLSVNHPHYISFHHFFH*WSEAHR
Trigger: TCGATGAGCTTCACTCCAGCAGTGAAAGAAGTGGTG...GAAAGAAATATAGTGTGGATGATTTACACTCAATGGGAGCAGGGGATCTGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
3UTR-3UTR CCA 90 bp AGTTCTCAATCCGAACAGCTATTGCATGATTACAGAGATAGCCTACAATCTTTTAGTAACTCTGTGAGGTaGGGCATTGGGGACACCATC +
Preference number: 2 (lower is better)
Translates to: SSQSEQLLHDYRDSLQSFSNSVR*GIGDTI
Trigger: GATGGTGTCCCCAATGCCCCACCTCACAGAGTTACT...AAAAGATTGTAGGCTATCTCTGTAATCATGCAATAGCTGTTCGGATTGAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
3UTR-3UTR TCA 90 bp GTACGTTCCTTTGCATCAAATAATGATGCGAACCGTACCATTAAAACCTCAAAATTGACCTGGTCATGCTaGGAGAGATCTCTGAACCCA +
Preference number: 2 (lower is better)
Translates to: VRSFASNNDANRTIKTSKLTWSC*ERSLNP
Trigger: TGGGTTCAGAGATCTCTCTCAGCATGACCAGGTCAA...TTTTGAGGTTTTAATGGTACGGTTCGCATCATTATTTGATGCAAAGGAACGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383773.8
3UTR-3UTR GCA 90 bp TTAGCAGATCCCCTGCTCCCATTGAGTGTAAATCATCCACACTATATTTCTTTCGGTCTATCAGGGAGATaGAGTCAACGTCTAATCATG +
Preference number: 2 (lower is better)
Translates to: LADPLLPLSVNHPHYISFGLSGR*SQRLIM
Trigger: CATGATTAGACGTTGACTGCATCTCCCTGATAGACC...GAAAGAAATATAGTGTGGATGATTTACACTCAATGGGAGCAGGGGATCTGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
3UTR-3UTR TCA 90 bp TTAGCAGATCCCCTGCTCCCATTGAGTGTAAATCATCCACACTATATTTCTTTCTCATGTCCTGATTTATaGGGATCCACATATGGAGAC +
Preference number: 2 (lower is better)
Translates to: LADPLLPLSVNHPHYISFSCPDL*GSTYGD
Trigger: GTCTCCATATGTGGATCCTCATAAATCAGGACATGA...GAAAGAAATATAGTGTGGATGATTTACACTCAATGGGAGCAGGGGATCTGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
3UTR-3UTR GCA 90 bp TCTATTCCAGATCGATCTGCAGATACCAGGACAACAGCTGTAAACAAACTCATCAATCCGAACAGCTATTaGATGATTACAGAGATAGCC +
Preference number: 2 (lower is better)
Translates to: SIPDRSADTRTTAVNKLINPNSY*MITEIA
Trigger: GGCTATCTCTGTAATCATGCAATAGCTGTTCGGATT...GATGAGTTTGTTTACAGCTGTTGTCCTGGTATCTGCAGATCGATCTGGAATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383773.8
3UTR-3UTR GCA 90 bp TTCCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGAGGTCTATCAGGGAGATaGAGTCAACGTCTAATCATG +
Preference number: 2 (lower is better)
Translates to: FPSAISINLNPLSDHVKRGLSGR*SQRLIM
Trigger: CATGATTAGACGTTGACTGCATCTCCCTGATAGACC...TCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
3UTR-3UTR GCA 90 bp TTCCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGACTTCTCCAGTTTAAGTaGGACACAGCTGATTGGTCT +
Preference number: 2 (lower is better)
Translates to: FPSAISINLNPLSDHVKRLLQFK*DTADWS
Trigger: AGACCAATCAGCTGTGTCGCACTTAAACTGGAGAAG...TCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
3UTR-3UTR GCA 90 bp TTCCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGATATAAGGGGCAGCAATaGAACCTTTCTCAGCACAAG +
Preference number: 2 (lower is better)
Translates to: FPSAISINLNPLSDHVKRYKGQQ*NLSQHK
Trigger: CTTGTGCTGAGAAAGGTTGCATTGCTGCCCCTTATA...TCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312521.9
3UTR-3UTR GCA 90 bp AACAAACTCATCTCTTCATCACTAAGTTGGAGGGCATTTAGCTTCTCACTAAATCCCAGGAATACGCTTTaGAAATTCCACCACTTCTTT +
Preference number: 2 (lower is better)
Translates to: NKLISSSLSWRAFSFSLNPRNTL*KFHHFF
Trigger: AAAGAAGTGGTGGAATTTGCAAAGCGTATTCCTGGG...ATTTAGTGAGAAGCTAAATGCCCTCCAACTTAGTGATGAAGAGATGAGTTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383773.8
3UTR-3UTR CCA 90 bp GTACGTTCCTTTGCATCAAATAATGATGCGAACCGTACCATTAAAACCTCAAAACACTTCTTTCACTGCTaGAGTGAAGCTCATCGAAAA +
Preference number: 2 (lower is better)
Translates to: VRSFASNNDANRTIKTSKHFFHC*SEAHRK
Trigger: TTTTCGATGAGCTTCACTCCAGCAGTGAAAGAAGTG...TTTTGAGGTTTTAATGGTACGGTTCGCATCATTATTTGATGCAAAGGAACGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383773.8
3UTR-3UTR TCA 90 bp TTCCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGAGTCCTCATACACTTGTaGTTGTGCGTTATATTGATA +
Preference number: 2 (lower is better)
Translates to: FPSAISINLNPLSDHVKRVLIHL*LCVILI
Trigger: TATCAATATAACGCACAATCACAAGTGTATGAGGAC...TCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
3UTR-3UTR TCA 90 bp CCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGATAAAACAACTAGTACCCTaGACCAAAGATTTTGCCAAA +
Preference number: 2 (lower is better)
Translates to: PLSYFYQLESSLRSCKEIKQLVP*TKDFAK
Trigger: TTTGGCAAAATCTTTGGTTCAGGGTACTAGTTGTTT...TATCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312521.9
3UTR-3UTR GCA 90 bp CCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGATACAAAATAAGGCATTCTaGTCACACGTCATGAAAGTA +
Preference number: 2 (lower is better)
Translates to: PLSYFYQLESSLRSCKEIQNKAF*SHVMKV
Trigger: TACTTTCATGACGTGTGAGCAGAATGCCTTATTTTG...TATCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312521.9
3UTR-3UTR GCA 90 bp AGTTCTCAATCCGAACAGCTATTGCATGATTACAGAGATAGCCTACAATCTTTTAAGAGCTCCTCAGAGTaGATGTTGTTTAAAGATCGA +
Preference number: 2 (lower is better)
Translates to: SSQSEQLLHDYRDSLQSFKSSSE*MLFKDR
Trigger: TCGATCTTTAAACAACATGCACTCTGAGGAGCTCTT...AAAAGATTGTAGGCTATCTCTGTAATCATGCAATAGCTGTTCGGATTGAGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
3UTR-3UTR CCA 90 bp CCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGATAATAATATGGTTGGTGTaGACTGAAATGATTTCCCAG +
Preference number: 2 (lower is better)
Translates to: PLSYFYQLESSLRSCKEIIIWLV*TEMISQ
Trigger: CTGGGAAATCATTTCAGTCCACACCAACCATATTAT...TATCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
3UTR-3UTR CCA 90 bp AGTTCTCAATCCGAACAGCTATTGCATGATTACAGAGATAGCCTACAATCTTTTATAATATGGTTGGTGTaGACTGAAATGATTTCCCAG +
Preference number: 2 (lower is better)
Translates to: SSQSEQLLHDYRDSLQSFIIWLV*TEMISQ
Trigger: CTGGGAAATCATTTCAGTCCACACCAACCATATTAT...AAAAGATTGTAGGCTATCTCTGTAATCATGCAATAGCTGTTCGGATTGAGAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
3UTR CAA 90 bp ACATTATTAATCAACAGTGTCCCACCAACTCAGAAGTTTCCTAAATaGGCTGCTTTCTCTGCATTTAGTAAGTTTATAACCAATGACTCA +
Preference number: 2 (lower is better)
Translates to: TLLINSVPPTQKFPK*AAFSAFSKFITNDS
Trigger: TGAGTCATTGGTTATAAACTTACTAAATGCAGAGAAAGCAGCCAATTTAGGAAACTTCTGAGTTGGTGGGACACTGTTGATTAATAATGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312521.9
3UTR GCA 72 bp TTAAGTGCGACACAGCTGATTGGTCTATCAGGGAGATaGAGTCAACGTCTAATCATGGCTGAAGAGTTCTCA +
Preference number: 3 (lower is better)
Translates to: LSATQLIGLSGR*SQRLIMAEEFS
Trigger: TGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAATCAGCTGTGTCGCACTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
3UTR TCA 72 bp TCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTaGAGAGTTCTCAATCCGAACAGCTATTGCATGATT +
Preference number: 3 (lower is better)
Translates to: SIREMQSTSNHG*RVLNPNSYCMI
Trigger: AATCATGCAATAGCTGTTCGGATTGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
3UTR-3UTR CAA 90 bp TTAGCAGATCCCCTGCTCCCATTGAGTGTAAATCATCCACACTATATTTCTTTCACCCAGGAATACGCTTaGCAAATTCCACCACTTCTT +
Preference number: 3 (lower is better)
Translates to: LADPLLPLSVNHPHYISFTQEYA*QIPPLL
Trigger: AAGAAGTGGTGGAATTTGCAAAGCGTATTCCTGGGT...GAAAGAAATATAGTGTGGATGATTTACACTCAATGGGAGCAGGGGATCTGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
3UTR GCA 72 bp ATTATTAAGGTCCTTAGTGCACGAATGAGAGTTTCCTaGAAAGCCTCCACAGAGTTGACGTTTTCTATTCCA +
Preference number: 3 (lower is better)
Translates to: IIKVLSARMRVS*KASTELTFSIP
Trigger: TGGAATAGAAAACGTCAACTCTGTGGAGGCTTTGCAGGAAACTCTCATTCGTGCACTAAGGACCTTAATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
3UTR-3UTR CAA 90 bp TATGTCTTTGTTGTACCCATAAACTTTGAATACGTGTGTATCAGTAGGATACCCATGGAGACTTACTCATaGGACAAACCTGTCAGTAGA +
Preference number: 3 (lower is better)
Translates to: YVFVVPINFEYVCISRIPMETYS*DKPVSR
Trigger: TCTACTGACAGGTTTGTCCAATGAGTAAGTCTCCAT...GGGTATCCTACTGATACACACGTATTCAAAGTTTATGGGTACAACAAAGACATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383773.8
3UTR TCA 72 bp ATGGCAGGAACCCTGAATAATATGGTTGGTGTGGACTaGAATGATTTCCCAGAAAGGCTTAGAAATAAGAAA +
Preference number: 3 (lower is better)
Translates to: MAGTLNNMVGVD*NDFPERLRNKK
Trigger: TTTCTTATTTCTAAGCCTTTCTGGGAAATCATTTCAGTCCACACCAACCATATTATTCAGGGTTCCTGCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
3UTR TCA 72 bp GAAGCTCATCGAAAATTCTTCCCAGATTTCATGTCCTaGTTTATGAGGATCCACATATGGAGACTTACTCAT +
Preference number: 3 (lower is better)
Translates to: EAHRKFFPDFMS*FMRIHIWRLTH
Trigger: ATGAGTAAGTCTCCATATGTGGATCCTCATAAATCAGGACATGAAATCTGGGAAGAATTTTCGATGAGCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
3UTR-3UTR CAA 90 bp TTACAAAATAAGGCATTCTGCTCACACGTCATGAAAGTAACAGGCTTAGTACAGCCTGAACCAAAGATTTaGCCAAAGATGAACTCTAAA +
Preference number: 3 (lower is better)
Translates to: LQNKAFCSHVMKVTGLVQPEPKI*PKMNSK
Trigger: TTTAGAGTTCATCTTTGGCAAAATCTTTGGTTCAGG...CTGTACTAAGCCTGTTACTTTCATGACGTGTGAGCAGAATGCCTTATTTTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
3UTR-3UTR CAA 90 bp TTACAAAATAAGGCATTCTGCTCACACGTCATGAAAGTAACAGGCTTAGTACAGATAAAATCCTCAACTTaGGCTATTTCTCCTACTACC +
Preference number: 3 (lower is better)
Translates to: LQNKAFCSHVMKVTGLVQIKSST*AISPTT
Trigger: GGTAGTAGGAGAAATAGCCAAAGTTGAGGATTTTAT...CTGTACTAAGCCTGTTACTTTCATGACGTGTGAGCAGAATGCCTTATTTTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR CCA 90 bp AACTTCTCCAGTTTAAGTGCGACACAGCTGATTGGTCTATCAGGGAGATGCAGTGGCTGGAAGCAGCGGTaGTCGCGGGGCCCCCTCATG +
Preference number: 4 (lower is better)
Translates to: NFSSLSATQLIGLSGRCSGWKQR*SRGPLM
Trigger: CATGAGGGGGCCCCGCGACCACCGCTGCTTCCAGCC...ACTGCATCTCCCTGATAGACCAATCAGCTGTGTCGCACTTAAACTGGAGAAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR GCA 90 bp CACAGAGTTGACGTTTTCTATTCCAGATCGATCTGCAGATACCAGGACAACAGCCATTCACCTCCATGGTaGCCTCGCGGAGGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: HRVDVFYSRSICRYQDNSHSPPW*PRGGGR
Trigger: CCGGCCGCCTCCGCGAGGGCACCATGGAGGTGAATG...GCTGTTGTCCTGGTATCTGCAGATCGATCTGGAATAGAAAACGTCAACTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR TCA 90 bp CAGCTGATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTCAGAACCCTCACTGTaGCAAGAGGCAGGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: QLIGLSGRCSQRLIMAEESEPSL*QEAGLE
Trigger: CTCAAGCCCTGCCTCTTGTCACAGTGAGGGTTCTGA...CTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAATCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR GCA 90 bp TTCCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGACATTCACCTCCATGGTaGCCTCGCGGAGGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: FPSAISINLNPLSDHVKRHSPPW*PRGGGR
Trigger: CCGGCCGCCTCCGCGAGGGCACCATGGAGGTGAATG...TCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR CCA 90 bp AGTTCTCAATCCGAACAGCTATTGCATGATTACAGAGATAGCCTACAATCTTTTGGCTGGAAGCAGCGGTaGTCGCGGGGCCCCCTCATG +
Preference number: 4 (lower is better)
Translates to: SSQSEQLLHDYRDSLQSFGWKQR*SRGPLM
Trigger: CATGAGGGGGCCCCGCGACCACCGCTGCTTCCAGCC...AAAAGATTGTAGGCTATCTCTGTAATCATGCAATAGCTGTTCGGATTGAGAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR TCA 90 bp CCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGATATCCTCGCTGGGTCCCTaGCAACAAAAGCGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: PLSYFYQLESSLRSCKEISSLGP*QQKRRR
Trigger: GCGCCGCCGCTTTTGTTGTCAGGGACCCAGCGAGGA...TATCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR TCA 90 bp CACAGAGTTGACGTTTTCTATTCCAGATCGATCTGCAGATACCAGGACAACAGCTCAGAACCCTCACTGTaGCAAGAGGCAGGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: HRVDVFYSRSICRYQDNSSEPSL*QEAGLE
Trigger: CTCAAGCCCTGCCTCTTGTCACAGTGAGGGTTCTGA...GCTGTTGTCCTGGTATCTGCAGATCGATCTGGAATAGAAAACGTCAACTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR TCA 90 bp CACAGAGTTGACGTTTTCTATTCCAGATCGATCTGCAGATACCAGGACAACAGCTCCATAGTGGAATCCTaGCGCCACATCCCCACAGAC +
Preference number: 4 (lower is better)
Translates to: HRVDVFYSRSICRYQDNSSIVES*RHIPTD
Trigger: GTCTGTGGGGATGTGGCGTCAGGATTCCACTATGGA...GCTGTTGTCCTGGTATCTGCAGATCGATCTGGAATAGAAAACGTCAACTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR GCA 90 bp CAGCTGATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTCTCCTCTCTGGGGCTaGATGCTCTCAGCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: QLIGLSGRCSQRLIMAEESPLWG*MLSAEF
Trigger: AAACTCAGCTGAGAGCATGCAGCCCCAGAGAGGAGA...CTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAATCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CCA 90 bp CAGCTGATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGAGTAACTCTGTGAGGTaGGGCATTGGGGACACCATC +
Preference number: 4 (lower is better)
Translates to: QLIGLSGRCSQRLIMAEESNSVR*GIGDTI
Trigger: GATGGTGTCCCCAATGCCCCACCTCACAGAGTTACT...CTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAATCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR TCA 90 bp CAGCTGATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGCTGCATGCTCTCAGCTaGGTTTTCTTGCTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: QLIGLSGRCSQRLIMAEELHALS*VFLLLL
Trigger: CAAGAGCAGCAAGAAAACTCAGCTGAGAGCATGCAG...CTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAATCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR GCA 90 bp AACTTCTCCAGTTTAAGTGCGACACAGCTGATTGGTCTATCAGGGAGATGCAGTTCTCCTCTCTGGGGCTaGATGCTCTCAGCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: NFSSLSATQLIGLSGRCSSPLWG*MLSAEF
Trigger: AAACTCAGCTGAGAGCATGCAGCCCCAGAGAGGAGA...ACTGCATCTCCCTGATAGACCAATCAGCTGTGTCGCACTTAAACTGGAGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CCA 90 bp ATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTTCTCAATCCGTTCTCCTCTCTaGGGCTGCATGCTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: IGLSGRCSQRLIMAEEFSIRSPL*GCMLSA
Trigger: AGCTGAGAGCATGCAGCCCCAGAGAGGAGAACGGAT...TGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CCA 90 bp CAGCTGATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTCACTACAGGGAAAATaGCTGCTAAGCCCATTGCCG +
Preference number: 4 (lower is better)
Translates to: QLIGLSGRCSQRLIMAEESLQGK*LLSPLP
Trigger: CGGCAATGGGCTTAGCAGCCATTTTCCCTGTAGTGA...CTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAATCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR TCA 90 bp AACTTCTCCAGTTTAAGTGCGACACAGCTGATTGGTCTATCAGGGAGATGCAGTTTGACCTGGTCATGCTaGGAGAGATCTCTGAACCCA +
Preference number: 4 (lower is better)
Translates to: NFSSLSATQLIGLSGRCSLTWSC*ERSLNP
Trigger: TGGGTTCAGAGATCTCTCTCAGCATGACCAGGTCAA...ACTGCATCTCCCTGATAGACCAATCAGCTGTGTCGCACTTAAACTGGAGAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR GCA 90 bp GTCCTGATTTATGAGGATCCACATATGGAGACTTACTCATTGGACAAACCTGTCGGCAATCACACCTCCTaGATTCACCTCCATGGTGCC +
Preference number: 4 (lower is better)
Translates to: VLIYEDPHMETYSLDKPVGNHTS*IHLHGA
Trigger: GGCACCATGGAGGTGAATGCAGGAGGTGTGATTGCC...GACAGGTTTGTCCAATGAGTAAGTCTCCATATGTGGATCCTCATAAATCAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR GCA 90 bp CTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTTCTCAATCCGATGTCCATTGAGATGCTaGTGGCTCTCACTACAGGGA +
Preference number: 4 (lower is better)
Translates to: LSGRCSQRLIMAEEFSIRCPLRC*WLSLQG
Trigger: TCCCTGTAGTGAGAGCCAGCAGCATCTCAATGGACA...TCGGATTGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CCA 90 bp TTCCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGAGGTCGCAGCTGTTCCTaGGCTGGCAAGGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: FPSAISINLNPLSDHVKRGRSCS*AGKAVC
Trigger: ACAGACAGCCTTGCCAGCCCAGGAACAGCTGCGACC...TCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR CCA 90 bp ATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTTCTCATTTTCTTGCTCCAGTTaGGGCTTGGGTCGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: IGLSGRCSQRLIMAEEFSFSCSS*GLGRSC
Trigger: ACAGCTGCGACCCAAGCCCCAACTGGAGCAAGAAAA...TGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR TCA 90 bp AACTTCTCCAGTTTAAGTGCGACACAGCTGATTGGTCTATCAGGGAGATGCAGTCTGAGCTGGAAGAACTaGTATAGGCAATCACACCTC +
Preference number: 4 (lower is better)
Translates to: NFSSLSATQLIGLSGRCSLSWKN*YRQSHL
Trigger: GAGGTGTGATTGCCTATATCAGTTCTTCCAGCTCAG...ACTGCATCTCCCTGATAGACCAATCAGCTGTGTCGCACTTAAACTGGAGAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR TCA 90 bp CTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTTCTCAATCCGATTTGCAAGTGACCACTaGACTGGCTGTTCATCATGG +
Preference number: 4 (lower is better)
Translates to: LSGRCSQRLIMAEEFSIRFASDH*TGCSSW
Trigger: CCATGATGAACAGCCAGTTCAGTGGTCACTTGCAAA...TCGGATTGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR TCA 90 bp CTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTTCTCAATCCGAGTGTCATTTTGCAAGTaGCCACTGAACTGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: LSGRCSQRLIMAEEFSIRVSFCK*PLNWLF
Trigger: GAACAGCCAGTTCAGTGGTCACTTGCAAAATGACAC...TCGGATTGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR GCA 90 bp AACTTCTCCAGTTTAAGTGCGACACAGCTGATTGGTCTATCAGGGAGATGCAGTGAGCTCTGGTCACCATaGCAATCACTTCTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: NFSSLSATQLIGLSGRCSELWSP*QSLLPL
Trigger: CAAAGGAAGAAGTGATTGGCATGGTGACCAGAGCTC...ACTGCATCTCCCTGATAGACCAATCAGCTGTGTCGCACTTAAACTGGAGAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR GCA 90 bp AACTTCTCCAGTTTAAGTGCGACACAGCTGATTGGTCTATCAGGGAGATGCAGTCGAATGAGAGTTTCCTaGAAAGCCTCCACAGAGTTG +
Preference number: 4 (lower is better)
Translates to: NFSSLSATQLIGLSGRCSRMRVS*KASTEL
Trigger: CAACTCTGTGGAGGCTTTGCAGGAAACTCTCATTCG...ACTGCATCTCCCTGATAGACCAATCAGCTGTGTCGCACTTAAACTGGAGAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CCA 90 bp TATGTCTTTGTTGTACCCATAAACTTTGAATACGTGTGTATCAGTAGGATACCCAGCGGCGCTCCTCGCTaGGTCCCTGACAACAAAAGC +
Preference number: 4 (lower is better)
Translates to: YVFVVPINFEYVCISRIPSGAPR*VPDNKS
Trigger: GCTTTTGTTGTCAGGGACCCAGCGAGGAGCGCCGCT...GGGTATCCTACTGATACACACGTATTCAAAGTTTATGGGTACAACAAAGACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR CCA 90 bp GTACGTTCCTTTGCATCAAATAATGATGCGAACCGTACCATTAAAACCTCAAAAGGTCGCAGCTGTTCCTaGGCTGGCAAGGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: VRSFASNNDANRTIKTSKGRSCS*AGKAVC
Trigger: ACAGACAGCCTTGCCAGCCCAGGAACAGCTGCGACC...TTTTGAGGTTTTAATGGTACGGTTCGCATCATTATTTGATGCAAAGGAACGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR CCA 90 bp CAGCTGATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGATTGCTCCATGTTCTTaGGAATCCGTTCTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: QLIGLSGRCSQRLIMAEEIAPCS*ESVLLS
Trigger: AGAGAGGAGAACGGATTCCCAAGAACATGGAGCAAT...CTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAATCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CCA 90 bp AACTTCTCCAGTTTAAGTGCGACACAGCTGATTGGTCTATCAGGGAGATGCAGTCCATTGAGATGCTGCTaGCTCTCACTACAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: NFSSLSATQLIGLSGRCSPLRCC*LSLQGK
Trigger: TTTTCCCTGTAGTGAGAGCCAGCAGCATCTCAATGG...ACTGCATCTCCCTGATAGACCAATCAGCTGTGTCGCACTTAAACTGGAGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
3UTR CAA 72 bp GCACGAATGAGAGTTTCCTGCAAAGCCTCCACAGAGTaGACGTTTTCTATTCCAGATCGATCTGCAGATACC +
Preference number: 4 (lower is better)
Translates to: ARMRVSCKASTE*TFSIPDRSADT
Trigger: GGTATCTGCAGATCGATCTGGAATAGAAAACGTCAACTCTGTGGAGGCTTTGCAGGAAACTCTCATTCGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR TCA 90 bp TCTATTCCAGATCGATCTGCAGATACCAGGACAACAGCTGTAAACAAACTCATCCTGCATGCTCTCAGCTaGGTTTTCTTGCTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: SIPDRSADTRTTAVNKLILHALS*VFLLLL
Trigger: CAAGAGCAGCAAGAAAACTCAGCTGAGAGCATGCAG...GATGAGTTTGTTTACAGCTGTTGTCCTGGTATCTGCAGATCGATCTGGAATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR TCA 90 bp ATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTTCTCATCCTTAGTGCACGAATaGGAGTTTCCTGCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: IGLSGRCSQRLIMAEEFSSLVHE*EFPAKP
Trigger: AGGCTTTGCAGGAAACTCTCATTCGTGCACTAAGGA...TGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR GCA 90 bp TTACAAAATAAGGCATTCTGCTCACACGTCATGAAAGTAACAGGCTTAGTACAGGGCAATCACACCTCCTaGATTCACCTCCATGGTGCC +
Preference number: 4 (lower is better)
Translates to: LQNKAFCSHVMKVTGLVQGNHTS*IHLHGA
Trigger: GGCACCATGGAGGTGAATGCAGGAGGTGTGATTGCC...CTGTACTAAGCCTGTTACTTTCATGACGTGTGAGCAGAATGCCTTATTTTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR GCA 90 bp ATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTTCTCAAACTGTCCATTGAGATaGTGCTGGCTCTCACTACAG +
Preference number: 4 (lower is better)
Translates to: IGLSGRCSQRLIMAEEFSNCPLR*CWLSLQ
Trigger: CTGTAGTGAGAGCCAGCAGCATCTCAATGGACAGTT...TGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR GCA 90 bp CACAGAGTTGACGTTTTCTATTCCAGATCGATCTGCAGATACCAGGACAACAGCTATTCCAGATCGATCTaGAGATACCAGGACAACAGC +
Preference number: 4 (lower is better)
Translates to: HRVDVFYSRSICRYQDNSYSRSI*RYQDNS
Trigger: GCTGTTGTCCTGGTATCTGCAGATCGATCTGGAATA...GCTGTTGTCCTGGTATCTGCAGATCGATCTGGAATAGAAAACGTCAACTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR GCA 90 bp CTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTTCTCAATCCGATATAAGGGGCAGCAATaGAACCTTTCTCAGCACAAG +
Preference number: 4 (lower is better)
Translates to: LSGRCSQRLIMAEEFSIRYKGQQ*NLSQHK
Trigger: CTTGTGCTGAGAAAGGTTGCATTGCTGCCCCTTATA...TCGGATTGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR CCA 90 bp CAGCTGATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGAGATGCCTTCAATATTaGCGAGATCACCATTCTTGG +
Preference number: 4 (lower is better)
Translates to: QLIGLSGRCSQRLIMAEERCLQY*RDHHSW
Trigger: CCAAGAATGGTGATCTCGCCAATATTGAAGGCATCT...CTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAATCAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CCA 90 bp TCTATTCCAGATCGATCTGCAGATACCAGGACAACAGCTGTAAACAAACTCATCTGTGAGGTGGGGCATTaGGGACACCATCAATTCTCA +
Preference number: 4 (lower is better)
Translates to: SIPDRSADTRTTAVNKLICEVGH*GHHQFS
Trigger: TGAGAATTGATGGTGTCCCCAATGCCCCACCTCACA...GATGAGTTTGTTTACAGCTGTTGTCCTGGTATCTGCAGATCGATCTGGAATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR TCA 90 bp TATGTCTTTGTTGTACCCATAAACTTTGAATACGTGTGTATCAGTAGGATACCCTCCATAGTGGAATCCTaGCGCCACATCCCCACAGAC +
Preference number: 4 (lower is better)
Translates to: YVFVVPINFEYVCISRIPSIVES*RHIPTD
Trigger: GTCTGTGGGGATGTGGCGTCAGGATTCCACTATGGA...GGGTATCCTACTGATACACACGTATTCAAAGTTTATGGGTACAACAAAGACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR TCA 90 bp TCTATTCCAGATCGATCTGCAGATACCAGGACAACAGCTGTAAACAAACTCATCCCGAACAGCATCTCTTaGCATTCCAACAGACAGACA +
Preference number: 4 (lower is better)
Translates to: SIPDRSADTRTTAVNKLIPNSIS*HSNRQT
Trigger: TGTCTGTCTGTTGGAATGTCAAGAGATGCTGTTCGG...GATGAGTTTGTTTACAGCTGTTGTCCTGGTATCTGCAGATCGATCTGGAATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR TCA 90 bp GTCCTGATTTATGAGGATCCACATATGGAGACTTACTCATTGGACAAACCTGTCGTGTCATTTTGCAAGTaGCCACTGAACTGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: VLIYEDPHMETYSLDKPVVSFCK*PLNWLF
Trigger: GAACAGCCAGTTCAGTGGTCACTTGCAAAATGACAC...GACAGGTTTGTCCAATGAGTAAGTCTCCATATGTGGATCCTCATAAATCAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR TCA 90 bp AACTTCTCCAGTTTAAGTGCGACACAGCTGATTGGTCTATCAGGGAGATGCAGTTCATGTCCTGATTTATaGGGATCCACATATGGAGAC +
Preference number: 4 (lower is better)
Translates to: NFSSLSATQLIGLSGRCSSCPDL*GSTYGD
Trigger: GTCTCCATATGTGGATCCTCATAAATCAGGACATGA...ACTGCATCTCCCTGATAGACCAATCAGCTGTGTCGCACTTAAACTGGAGAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR TCA 90 bp CAGCTGATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGCCAGATTTCATGTCCTaGTTTATGAGGATCCACATA +
Preference number: 4 (lower is better)
Translates to: QLIGLSGRCSQRLIMAEEPDFMS*FMRIHI
Trigger: TATGTGGATCCTCATAAATCAGGACATGAAATCTGG...CTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAATCAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR TCA 90 bp CAGCTGATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTTCCACTTAAAAAGGTaGCAGTACGTTCCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: QLIGLSGRCSQRLIMAEEFHLKR*QYVPLH
Trigger: ATGCAAAGGAACGTACTGTCACCTTTTTAAGTGGAA...CTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAATCAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR TCA 90 bp ATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTTCTCAAAGCCTCCACAGAGTTaGCGTTTTCTATTCCAGATC +
Preference number: 4 (lower is better)
Translates to: IGLSGRCSQRLIMAEEFSKPPQS*RFLFQI
Trigger: GATCTGGAATAGAAAACGTCAACTCTGTGGAGGCTT...TGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR GCA 90 bp TCTATTCCAGATCGATCTGCAGATACCAGGACAACAGCTGTAAACAAACTCATCCACCACTTCTTTCACTaGTGGAGTGAAGCTCATCGA +
Preference number: 4 (lower is better)
Translates to: SIPDRSADTRTTAVNKLIHHFFH*WSEAHR
Trigger: TCGATGAGCTTCACTCCAGCAGTGAAAGAAGTGGTG...GATGAGTTTGTTTACAGCTGTTGTCCTGGTATCTGCAGATCGATCTGGAATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR GCA 90 bp CAGCTGATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGACGCACACACACACATaGCATCATATTAAACAGTTG +
Preference number: 4 (lower is better)
Translates to: QLIGLSGRCSQRLIMAEETHTHT*HHIKQL
Trigger: CAACTGTTTAATATGATGGCATGTGTGTGTGTGCGT...CTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAATCAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR CCA 90 bp TATGTCTTTGTTGTACCCATAAACTTTGAATACGTGTGTATCAGTAGGATACCCATCCGTTCTCCTCTCTaGGGCTGCATGCTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: YVFVVPINFEYVCISRIPIRSPL*GCMLSA
Trigger: AGCTGAGAGCATGCAGCCCCAGAGAGGAGAACGGAT...GGGTATCCTACTGATACACACGTATTCAAAGTTTATGGGTACAACAAAGACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CCA 90 bp AACTTCTCCAGTTTAAGTGCGACACAGCTGATTGGTCTATCAGGGAGATGCAGTCACTTCTTTCACTGCTaGAGTGAAGCTCATCGAAAA +
Preference number: 4 (lower is better)
Translates to: NFSSLSATQLIGLSGRCSHFFHC*SEAHRK
Trigger: TTTTCGATGAGCTTCACTCCAGCAGTGAAAGAAGTG...ACTGCATCTCCCTGATAGACCAATCAGCTGTGTCGCACTTAAACTGGAGAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR TCA 90 bp CTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTTCTCAATCCGACCAGATTTCATGTCCTaGTTTATGAGGATCCACATA +
Preference number: 4 (lower is better)
Translates to: LSGRCSQRLIMAEEFSIRPDFMS*FMRIHI
Trigger: TATGTGGATCCTCATAAATCAGGACATGAAATCTGG...TCGGATTGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR TCA 90 bp ATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTTCTCACTTTCACTGCTGGAGTaGAGCTCATCGAAAATTCTT +
Preference number: 4 (lower is better)
Translates to: IGLSGRCSQRLIMAEEFSLSLLE*SSSKIL
Trigger: AAGAATTTTCGATGAGCTTCACTCCAGCAGTGAAAG...TGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR GCA 90 bp CACAGAGTTGACGTTTTCTATTCCAGATCGATCTGCAGATACCAGGACAACAGCTTTTGTCATCCCAGGTaGACTCGATTTGCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: HRVDVFYSRSICRYQDNSFCHPR*TRFACF
Trigger: AAAACAAGCAAATCGAGTGCACCTGGGATGACAAAA...GCTGTTGTCCTGGTATCTGCAGATCGATCTGGAATAGAAAACGTCAACTCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR GCA 90 bp TTACAAAATAAGGCATTCTGCTCACACGTCATGAAAGTAACAGGCTTAGTACAGTGTCCATTGAGATGCTaGTGGCTCTCACTACAGGGA +
Preference number: 4 (lower is better)
Translates to: LQNKAFCSHVMKVTGLVQCPLRC*WLSLQG
Trigger: TCCCTGTAGTGAGAGCCAGCAGCATCTCAATGGACA...CTGTACTAAGCCTGTTACTTTCATGACGTGTGAGCAGAATGCCTTATTTTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR GCA 90 bp ATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTTCTCACCCAGGAATACGCTTTaGAAATTCCACCACTTCTTT +
Preference number: 4 (lower is better)
Translates to: IGLSGRCSQRLIMAEEFSPRNTL*KFHHFF
Trigger: AAAGAAGTGGTGGAATTTGCAAAGCGTATTCCTGGG...TGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR GCA 90 bp TTAGCAGATCCCCTGCTCCCATTGAGTGTAAATCATCCACACTATATTTCTTTCCGAATGAGAGTTTCCTaGAAAGCCTCCACAGAGTTG +
Preference number: 4 (lower is better)
Translates to: LADPLLPLSVNHPHYISFRMRVS*KASTEL
Trigger: CAACTCTGTGGAGGCTTTGCAGGAAACTCTCATTCG...GAAAGAAATATAGTGTGGATGATTTACACTCAATGGGAGCAGGGGATCTGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR GCA 90 bp GTCCTGATTTATGAGGATCCACATATGGAGACTTACTCATTGGACAAACCTGTCCTTCTCCAGTTTAAGTaGGACACAGCTGATTGGTCT +
Preference number: 4 (lower is better)
Translates to: VLIYEDPHMETYSLDKPVLLQFK*DTADWS
Trigger: AGACCAATCAGCTGTGTCGCACTTAAACTGGAGAAG...GACAGGTTTGTCCAATGAGTAAGTCTCCATATGTGGATCCTCATAAATCAGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR CCA 90 bp AACAAACTCATCTCTTCATCACTAAGTTGGAGGGCATTTAGCTTCTCACTAAATTTTTCTTGCTCCAGTTaGGGCTTGGGTCGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: NKLISSSLSWRAFSFSLNFSCSS*GLGRSC
Trigger: ACAGCTGCGACCCAAGCCCCAACTGGAGCAAGAAAA...ATTTAGTGAGAAGCTAAATGCCCTCCAACTTAGTGATGAAGAGATGAGTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR CCA 90 bp CCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGATATCACTACAGGGAAAATaGCTGCTAAGCCCATTGCCG +
Preference number: 4 (lower is better)
Translates to: PLSYFYQLESSLRSCKEISLQGK*LLSPLP
Trigger: CGGCAATGGGCTTAGCAGCCATTTTCCCTGTAGTGA...TATCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR CCA 90 bp TTACAAAATAAGGCATTCTGCTCACACGTCATGAAAGTAACAGGCTTAGTACAGTGTGAGGTGGGGCATTaGGGACACCATCAATTCTCA +
Preference number: 4 (lower is better)
Translates to: LQNKAFCSHVMKVTGLVQCEVGH*GHHQFS
Trigger: TGAGAATTGATGGTGTCCCCAATGCCCCACCTCACA...CTGTACTAAGCCTGTTACTTTCATGACGTGTGAGCAGAATGCCTTATTTTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR CCA 90 bp CACAGAGTTGACGTTTTCTATTCCAGATCGATCTGCAGATACCAGGACAACAGCCTTCATGGTTTAAACTaGAAATGGTGTGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: HRVDVFYSRSICRYQDNSLHGLN*KWCGTA
Trigger: AGCAGTACCACACCATTTCCAGTTTAAACCATGAAG...GCTGTTGTCCTGGTATCTGCAGATCGATCTGGAATAGAAAACGTCAACTCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR TCA 90 bp CCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGATAATAAAGGTATCCTTGTaGGCTCTGGTCACCATGCCA +
Preference number: 4 (lower is better)
Translates to: PLSYFYQLESSLRSCKEIIKVSL*ALVTMP
Trigger: TGGCATGGTGACCAGAGCTCACAAGGATACCTTTAT...TATCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR TCA 90 bp TATGTCTTTGTTGTACCCATAAACTTTGAATACGTGTGTATCAGTAGGATACCCGCTGAGAGAGATCTCTaGACCCAGGAATACGCTTTG +
Preference number: 4 (lower is better)
Translates to: YVFVVPINFEYVCISRIPAERDL*TQEYAL
Trigger: CAAAGCGTATTCCTGGGTTCAGAGATCTCTCTCAGC...GGGTATCCTACTGATACACACGTATTCAAAGTTTATGGGTACAACAAAGACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR TCA 90 bp AACAAACTCATCTCTTCATCACTAAGTTGGAGGGCATTTAGCTTCTCACTAAATTTGACCTGGTCATGCTaGGAGAGATCTCTGAACCCA +
Preference number: 4 (lower is better)
Translates to: NKLISSSLSWRAFSFSLNLTWSC*ERSLNP
Trigger: TGGGTTCAGAGATCTCTCTCAGCATGACCAGGTCAA...ATTTAGTGAGAAGCTAAATGCCCTCCAACTTAGTGATGAAGAGATGAGTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR TCA 90 bp ATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTTCTCATTCCACTTAAAAAGGTaGCAGTACGTTCCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: IGLSGRCSQRLIMAEEFSFHLKR*QYVPLH
Trigger: ATGCAAAGGAACGTACTGTCACCTTTTTAAGTGGAA...TGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR TCA 90 bp TTACAAAATAAGGCATTCTGCTCACACGTCATGAAAGTAACAGGCTTAGTACAGTCCTTAGTGCACGAATaGGAGTTTCCTGCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: LQNKAFCSHVMKVTGLVQSLVHE*EFPAKP
Trigger: AGGCTTTGCAGGAAACTCTCATTCGTGCACTAAGGA...CTGTACTAAGCCTGTTACTTTCATGACGTGTGAGCAGAATGCCTTATTTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR TCA 90 bp CTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTTCTCAATCCGAGTCCTCATACACTTGTaGTTGTGCGTTATATTGATA +
Preference number: 4 (lower is better)
Translates to: LSGRCSQRLIMAEEFSIRVLIHL*LCVILI
Trigger: TATCAATATAACGCACAATCACAAGTGTATGAGGAC...TCGGATTGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR TCA 90 bp AACTTCTCCAGTTTAAGTGCGACACAGCTGATTGGTCTATCAGGGAGATGCAGTGTCCTCATACACTTGTaGTTGTGCGTTATATTGATA +
Preference number: 4 (lower is better)
Translates to: NFSSLSATQLIGLSGRCSVLIHL*LCVILI
Trigger: TATCAATATAACGCACAATCACAAGTGTATGAGGAC...ACTGCATCTCCCTGATAGACCAATCAGCTGTGTCGCACTTAAACTGGAGAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR TCA 90 bp ATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTTCTCAAGTAATAAATCTAGCTaGGCTGCTACACCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: IGLSGRCSQRLIMAEEFSSNKSS*AATPCF
Trigger: AAAGCAAGGTGTAGCAGCTCAGCTAGATTTATTACT...TGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR GCA 90 bp CCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGATAGAGCTCTGGTCACCATaGCAATCACTTCTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: PLSYFYQLESSLRSCKEIELWSP*QSLLPL
Trigger: CAAAGGAAGAAGTGATTGGCATGGTGACCAGAGCTC...TATCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR CCA 90 bp TTCCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGAGAAGAGGAGGAGGACTaGAAACTATTCTCAGAACCC +
Preference number: 4 (lower is better)
Translates to: FPSAISINLNPLSDHVKREEEED*KLFSEP
Trigger: GGGTTCTGAGAATAGTTTCCAGTCCTCCTCCTCTTC...TCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR CCA 90 bp TTCCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGACCATTGAGATGCTGCTaGCTCTCACTACAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: FPSAISINLNPLSDHVKRPLRCC*LSLQGK
Trigger: TTTTCCCTGTAGTGAGAGCCAGCAGCATCTCAATGG...TCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR CCA 90 bp GTACGTTCCTTTGCATCAAATAATGATGCGAACCGTACCATTAAAACCTCAAAATGCGACACAGCTGATTaGTCTATCAGGGAGATGCAG +
Preference number: 4 (lower is better)
Translates to: VRSFASNNDANRTIKTSKCDTAD*SIREMQ
Trigger: CTGCATCTCCCTGATAGACCAATCAGCTGTGTCGCA...TTTTGAGGTTTTAATGGTACGGTTCGCATCATTATTTGATGCAAAGGAACGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR CCA 90 bp AACTTCTCCAGTTTAAGTGCGACACAGCTGATTGGTCTATCAGGGAGATGCAGTATAATATGGTTGGTGTaGACTGAAATGATTTCCCAG +
Preference number: 4 (lower is better)
Translates to: NFSSLSATQLIGLSGRCSIIWLV*TEMISQ
Trigger: CTGGGAAATCATTTCAGTCCACACCAACCATATTAT...ACTGCATCTCCCTGATAGACCAATCAGCTGTGTCGCACTTAAACTGGAGAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR TCA 90 bp AGTTCTCAATCCGAACAGCTATTGCATGATTACAGAGATAGCCTACAATCTTTTCTGAGCTGGAAGAACTaGTATAGGCAATCACACCTC +
Preference number: 4 (lower is better)
Translates to: SSQSEQLLHDYRDSLQSFLSWKN*YRQSHL
Trigger: GAGGTGTGATTGCCTATATCAGTTCTTCCAGCTCAG...AAAAGATTGTAGGCTATCTCTGTAATCATGCAATAGCTGTTCGGATTGAGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR TCA 90 bp AGTTCTCAATCCGAACAGCTATTGCATGATTACAGAGATAGCCTACAATCTTTTCCGAACAGCATCTCTTaGCATTCCAACAGACAGACA +
Preference number: 4 (lower is better)
Translates to: SSQSEQLLHDYRDSLQSFPNSIS*HSNRQT
Trigger: TGTCTGTCTGTTGGAATGTCAAGAGATGCTGTTCGG...AAAAGATTGTAGGCTATCTCTGTAATCATGCAATAGCTGTTCGGATTGAGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR TCA 90 bp TATGTCTTTGTTGTACCCATAAACTTTGAATACGTGTGTATCAGTAGGATACCCTTTGCAAGTGACCACTaGACTGGCTGTTCATCATGG +
Preference number: 4 (lower is better)
Translates to: YVFVVPINFEYVCISRIPFASDH*TGCSSW
Trigger: CCATGATGAACAGCCAGTTCAGTGGTCACTTGCAAA...GGGTATCCTACTGATACACACGTATTCAAAGTTTATGGGTACAACAAAGACATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR TCA 90 bp TTAGCAGATCCCCTGCTCCCATTGAGTGTAAATCATCCACACTATATTTCTTTCGAGGAGAAGAGCTTTTaGTGTTTTCTTGCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: LADPLLPLSVNHPHYISFEEKSF*CFLAPV
Trigger: AACTGGAGCAAGAAAACATCAAAAGCTCTTCTCCTC...GAAAGAAATATAGTGTGGATGATTTACACTCAATGGGAGCAGGGGATCTGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR TCA 90 bp GTACGTTCCTTTGCATCAAATAATGATGCGAACCGTACCATTAAAACCTCAAAAATAAAGGTATCCTTGTaGGCTCTGGTCACCATGCCA +
Preference number: 4 (lower is better)
Translates to: VRSFASNNDANRTIKTSKIKVSL*ALVTMP
Trigger: TGGCATGGTGACCAGAGCTCACAAGGATACCTTTAT...TTTTGAGGTTTTAATGGTACGGTTCGCATCATTATTTGATGCAAAGGAACGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR TCA 90 bp TATGTCTTTGTTGTACCCATAAACTTTGAATACGTGTGTATCAGTAGGATACCCCAGCCTTTAAAAGGTTaGCCTGGTCATGCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: YVFVVPINFEYVCISRIPQPLKG*PGHAER
Trigger: TCTCTCAGCATGACCAGGTCAACCTTTTAAAGGCTG...GGGTATCCTACTGATACACACGTATTCAAAGTTTATGGGTACAACAAAGACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR TCA 90 bp GTACGTTCCTTTGCATCAAATAATGATGCGAACCGTACCATTAAAACCTCAAAACAGCCTTTAAAAGGTTaGCCTGGTCATGCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: VRSFASNNDANRTIKTSKQPLKG*PGHAER
Trigger: TCTCTCAGCATGACCAGGTCAACCTTTTAAAGGCTG...TTTTGAGGTTTTAATGGTACGGTTCGCATCATTATTTGATGCAAAGGAACGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR TCA 90 bp CCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGATAACGTCTAATCATGGCTaGAGAGTTCTCAATCCGAAC +
Preference number: 4 (lower is better)
Translates to: PLSYFYQLESSLRSCKEITSNHG*RVLNPN
Trigger: GTTCGGATTGAGAACTCTTCAGCCATGATTAGACGT...TATCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR TCA 90 bp TTCCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGAATGGTTGGTGTGGACTaGAATGATTTCCCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: FPSAISINLNPLSDHVKRMVGVD*NDFPER
Trigger: CCTTTCTGGGAAATCATTTCAGTCCACACCAACCAT...TCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR TCA 90 bp TTACAAAATAAGGCATTCTGCTCACACGTCATGAAAGTAACAGGCTTAGTACAGATATGGCAGGAACCCTaGATAATATGGTTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LQNKAFCSHVMKVTGLVQIWQEP*IIWLVW
Trigger: CCACACCAACCATATTATTCAGGGTTCCTGCCATAT...CTGTACTAAGCCTGTTACTTTCATGACGTGTGAGCAGAATGCCTTATTTTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR GCA 90 bp TATGTCTTTGTTGTACCCATAAACTTTGAATACGTGTGTATCAGTAGGATACCCAACTGTCCATTGAGATaGTGCTGGCTCTCACTACAG +
Preference number: 4 (lower is better)
Translates to: YVFVVPINFEYVCISRIPNCPLR*CWLSLQ
Trigger: CTGTAGTGAGAGCCAGCAGCATCTCAATGGACAGTT...GGGTATCCTACTGATACACACGTATTCAAAGTTTATGGGTACAACAAAGACATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR GCA 90 bp AGTTCTCAATCCGAACAGCTATTGCATGATTACAGAGATAGCCTACAATCTTTTCACCACTTCTTTCACTaGTGGAGTGAAGCTCATCGA +
Preference number: 4 (lower is better)
Translates to: SSQSEQLLHDYRDSLQSFHHFFH*WSEAHR
Trigger: TCGATGAGCTTCACTCCAGCAGTGAAAGAAGTGGTG...AAAAGATTGTAGGCTATCTCTGTAATCATGCAATAGCTGTTCGGATTGAGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR GCA 90 bp CCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGATACTTCTCCAGTTTAAGTaGGACACAGCTGATTGGTCT +
Preference number: 4 (lower is better)
Translates to: PLSYFYQLESSLRSCKEILLQFK*DTADWS
Trigger: AGACCAATCAGCTGTGTCGCACTTAAACTGGAGAAG...TATCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR CCA 90 bp AGTTCTCAATCCGAACAGCTATTGCATGATTACAGAGATAGCCTACAATCTTTTGAAGAGGAGGAGGACTaGAAACTATTCTCAGAACCC +
Preference number: 4 (lower is better)
Translates to: SSQSEQLLHDYRDSLQSFEEEED*KLFSEP
Trigger: GGGTTCTGAGAATAGTTTCCAGTCCTCCTCCTCTTC...AAAAGATTGTAGGCTATCTCTGTAATCATGCAATAGCTGTTCGGATTGAGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CCA 90 bp CACAGAGTTGACGTTTTCTATTCCAGATCGATCTGCAGATACCAGGACAACAGCAATGGCATGACCATTTaGGTAATGCATTATATTCCT +
Preference number: 4 (lower is better)
Translates to: HRVDVFYSRSICRYQDNSNGMTI*VMHYIP
Trigger: AGGAATATAATGCATTACCCAAATGGTCATGCCATT...GCTGTTGTCCTGGTATCTGCAGATCGATCTGGAATAGAAAACGTCAACTCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR TCA 90 bp TTACAAAATAAGGCATTCTGCTCACACGTCATGAAAGTAACAGGCTTAGTACAGTTTGTCACACCACTATaGCTTTTTGTCATCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LQNKAFCSHVMKVTGLVQFVTPL*LFVIPG
Trigger: ACCTGGGATGACAAAAAGTCATAGTGGTGTGACAAA...CTGTACTAAGCCTGTTACTTTCATGACGTGTGAGCAGAATGCCTTATTTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR TCA 90 bp TTACAAAATAAGGCATTCTGCTCACACGTCATGAAAGTAACAGGCTTAGTACAGGAGGAGAAGAGCTTTTaGTGTTTTCTTGCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: LQNKAFCSHVMKVTGLVQEEKSF*CFLAPV
Trigger: AACTGGAGCAAGAAAACATCAAAAGCTCTTCTCCTC...CTGTACTAAGCCTGTTACTTTCATGACGTGTGAGCAGAATGCCTTATTTTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR TCA 90 bp TCTATTCCAGATCGATCTGCAGATACCAGGACAACAGCTGTAAACAAACTCATCTTCTTGTTCTCATTCTaGGAAAATCCATCTATCGGA +
Preference number: 4 (lower is better)
Translates to: SIPDRSADTRTTAVNKLIFLFSF*ENPSIG
Trigger: TCCGATAGATGGATTTTCTCAGAATGAGAACAAGAA...GATGAGTTTGTTTACAGCTGTTGTCCTGGTATCTGCAGATCGATCTGGAATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR TCA 90 bp AGTTCTCAATCCGAACAGCTATTGCATGATTACAGAGATAGCCTACAATCTTTTAAGCCTCCACAGAGTTaGCGTTTTCTATTCCAGATC +
Preference number: 4 (lower is better)
Translates to: SSQSEQLLHDYRDSLQSFKPPQS*RFLFQI
Trigger: GATCTGGAATAGAAAACGTCAACTCTGTGGAGGCTT...AAAAGATTGTAGGCTATCTCTGTAATCATGCAATAGCTGTTCGGATTGAGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR TCA 90 bp TCATTTGGATGGTTTTTCATTATTAAGGTCCTTAGTGCACGAATGAGAGTTTCCATGGTTGGTGTGGACTaGAATGATTTCCCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: SFGWFFIIKVLSARMRVSMVGVD*NDFPER
Trigger: CCTTTCTGGGAAATCATTTCAGTCCACACCAACCAT...GGAAACTCTCATTCGTGCACTAAGGACCTTAATAATGAAAAACCATCCAAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR TCA 90 bp TATGTCTTTGTTGTACCCATAAACTTTGAATACGTGTGTATCAGTAGGATACCCATATGGCAGGAACCCTaGATAATATGGTTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: YVFVVPINFEYVCISRIPIWQEP*IIWLVW
Trigger: CCACACCAACCATATTATTCAGGGTTCCTGCCATAT...GGGTATCCTACTGATACACACGTATTCAAAGTTTATGGGTACAACAAAGACATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR GCA 90 bp CCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGATAATTGGACAAACCAGATaGATTCTTCCTCCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: PLSYFYQLESSLRSCKEIIGQTR*ILPPVL
Trigger: CAACACTGGAGGAAGAATGCATCTGGTTTGTCCAAT...TATCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR GCA 90 bp TATGTCTTTGTTGTACCCATAAACTTTGAATACGTGTGTATCAGTAGGATACCCTATTCCAGATCGATCTaGAGATACCAGGACAACAGC +
Preference number: 4 (lower is better)
Translates to: YVFVVPINFEYVCISRIPYSRSI*RYQDNS
Trigger: GCTGTTGTCCTGGTATCTGCAGATCGATCTGGAATA...GGGTATCCTACTGATACACACGTATTCAAAGTTTATGGGTACAACAAAGACATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR GCA 90 bp TATGTCTTTGTTGTACCCATAAACTTTGAATACGTGTGTATCAGTAGGATACCCGGTCTATCAGGGAGATaGAGTCAACGTCTAATCATG +
Preference number: 4 (lower is better)
Translates to: YVFVVPINFEYVCISRIPGLSGR*SQRLIM
Trigger: CATGATTAGACGTTGACTGCATCTCCCTGATAGACC...GGGTATCCTACTGATACACACGTATTCAAAGTTTATGGGTACAACAAAGACATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CCA 90 bp TATGTCTTTGTTGTACCCATAAACTTTGAATACGTGTGTATCAGTAGGATACCCATTGCTCCATGTTCTTaGGAATCCGTTCTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: YVFVVPINFEYVCISRIPIAPCS*ESVLLS
Trigger: AGAGAGGAGAACGGATTCCCAAGAACATGGAGCAAT...GGGTATCCTACTGATACACACGTATTCAAAGTTTATGGGTACAACAAAGACATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CCA 90 bp TTAGCAGATCCCCTGCTCCCATTGAGTGTAAATCATCCACACTATATTTCTTTCTCTTCATCACTAAGTTaGAGGGCATTTAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LADPLLPLSVNHPHYISFSSSLS*RAFSFS
Trigger: TGAGAAGCTAAATGCCCTCCAACTTAGTGATGAAGA...GAAAGAAATATAGTGTGGATGATTTACACTCAATGGGAGCAGGGGATCTGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR CCA 90 bp TTAGCAGATCCCCTGCTCCCATTGAGTGTAAATCATCCACACTATATTTCTTTCTGGAGACTTACTCATTaGACAAACCTGTCAGTAGAA +
Preference number: 4 (lower is better)
Translates to: LADPLLPLSVNHPHYISFWRLTH*TNLSVE
Trigger: TTCTACTGACAGGTTTGTCCAATGAGTAAGTCTCCA...GAAAGAAATATAGTGTGGATGATTTACACTCAATGGGAGCAGGGGATCTGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR TCA 90 bp TCATTTGGATGGTTTTTCATTATTAAGGTCCTTAGTGCACGAATGAGAGTTTCCTTTGTCACACCACTATaGCTTTTTGTCATCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SFGWFFIIKVLSARMRVSFVTPL*LFVIPG
Trigger: ACCTGGGATGACAAAAAGTCATAGTGGTGTGACAAA...GGAAACTCTCATTCGTGCACTAAGGACCTTAATAATGAAAAACCATCCAAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR TCA 90 bp AGTTCTCAATCCGAACAGCTATTGCATGATTACAGAGATAGCCTACAATCTTTTTCATGTCCTGATTTATaGGGATCCACATATGGAGAC +
Preference number: 4 (lower is better)
Translates to: SSQSEQLLHDYRDSLQSFSCPDL*GSTYGD
Trigger: GTCTCCATATGTGGATCCTCATAAATCAGGACATGA...AAAAGATTGTAGGCTATCTCTGTAATCATGCAATAGCTGTTCGGATTGAGAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR TCA 90 bp TCATTTGGATGGTTTTTCATTATTAAGGTCCTTAGTGCACGAATGAGAGTTTCCCTTTCACTGCTGGAGTaGAGCTCATCGAAAATTCTT +
Preference number: 4 (lower is better)
Translates to: SFGWFFIIKVLSARMRVSLSLLE*SSSKIL
Trigger: AAGAATTTTCGATGAGCTTCACTCCAGCAGTGAAAG...GGAAACTCTCATTCGTGCACTAAGGACCTTAATAATGAAAAACCATCCAAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR GCA 90 bp AGTTCTCAATCCGAACAGCTATTGCATGATTACAGAGATAGCCTACAATCTTTTCCCAGGAATACGCTTTaGAAATTCCACCACTTCTTT +
Preference number: 4 (lower is better)
Translates to: SSQSEQLLHDYRDSLQSFPRNTL*KFHHFF
Trigger: AAAGAAGTGGTGGAATTTGCAAAGCGTATTCCTGGG...AAAAGATTGTAGGCTATCTCTGTAATCATGCAATAGCTGTTCGGATTGAGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR GCA 90 bp TTCCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGAAAGAGCTCCTCAGAGTaGATGTTGTTTAAAGATCGA +
Preference number: 4 (lower is better)
Translates to: FPSAISINLNPLSDHVKRKSSSE*MLFKDR
Trigger: TCGATCTTTAAACAACATGCACTCTGAGGAGCTCTT...TCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR GCA 90 bp CCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGATAAATCCGAACAGCTATTaGATGATTACAGAGATAGCC +
Preference number: 4 (lower is better)
Translates to: PLSYFYQLESSLRSCKEINPNSY*MITEIA
Trigger: GGCTATCTCTGTAATCATGCAATAGCTGTTCGGATT...TATCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR CCA 90 bp TATGTCTTTGTTGTACCCATAAACTTTGAATACGTGTGTATCAGTAGGATACCCAGATGCCTTCAATATTaGCGAGATCACCATTCTTGG +
Preference number: 4 (lower is better)
Translates to: YVFVVPINFEYVCISRIPRCLQY*RDHHSW
Trigger: CCAAGAATGGTGATCTCGCCAATATTGAAGGCATCT...GGGTATCCTACTGATACACACGTATTCAAAGTTTATGGGTACAACAAAGACATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CCA 90 bp TTACAAAATAAGGCATTCTGCTCACACGTCATGAAAGTAACAGGCTTAGTACAGTGGAGACTTACTCATTaGACAAACCAGATGCATTCT +
Preference number: 4 (lower is better)
Translates to: LQNKAFCSHVMKVTGLVQWRLTH*TNQMHS
Trigger: AGAATGCATCTGGTTTGTCCAATGAGTAAGTCTCCA...CTGTACTAAGCCTGTTACTTTCATGACGTGTGAGCAGAATGCCTTATTTTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR CCA 90 bp TCATTTGGATGGTTTTTCATTATTAAGGTCCTTAGTGCACGAATGAGAGTTTCCCACTTCTTTCACTGCTaGAGTGAAGCTCATCGAAAA +
Preference number: 4 (lower is better)
Translates to: SFGWFFIIKVLSARMRVSHFFHC*SEAHRK
Trigger: TTTTCGATGAGCTTCACTCCAGCAGTGAAAGAAGTG...GGAAACTCTCATTCGTGCACTAAGGACCTTAATAATGAAAAACCATCCAAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR CCA 90 bp TTCCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGATCTTCATCACTAAGTTaGAGGGCATTTAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: FPSAISINLNPLSDHVKRSSSLS*RAFSFS
Trigger: TGAGAAGCTAAATGCCCTCCAACTTAGTGATGAAGA...TCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR CCA 90 bp TCTATTCCAGATCGATCTGCAGATACCAGGACAACAGCTGTAAACAAACTCATCTTTGTCGTTGAAATTTaGATTCAATTGCCTGTTGCA +
Preference number: 4 (lower is better)
Translates to: SIPDRSADTRTTAVNKLIFVVEI*IQLPVA
Trigger: TGCAACAGGCAATTGAATCCAAATTTCAACGACAAA...GATGAGTTTGTTTACAGCTGTTGTCCTGGTATCTGCAGATCGATCTGGAATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR TCA 90 bp CCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGATATTCTTGTTCTCATTCTaGGAAAATCCATCTATCGGA +
Preference number: 4 (lower is better)
Translates to: PLSYFYQLESSLRSCKEIFLFSF*ENPSIG
Trigger: TCCGATAGATGGATTTTCTCAGAATGAGAACAAGAA...TATCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR TCA 90 bp TTACAAAATAAGGCATTCTGCTCACACGTCATGAAAGTAACAGGCTTAGTACAGCTATTTCTATCAACTTaGATCCTCTCTCAGATCATG +
Preference number: 4 (lower is better)
Translates to: LQNKAFCSHVMKVTGLVQLFLST*ILSQIM
Trigger: CATGATCTGAGAGAGGATTCAAGTTGATAGAAATAG...CTGTACTAAGCCTGTTACTTTCATGACGTGTGAGCAGAATGCCTTATTTTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR GCA 90 bp TATGTCTTTGTTGTACCCATAAACTTTGAATACGTGTGTATCAGTAGGATACCCTTTTGTCATCCCAGGTaGACTCGATTTGCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: YVFVVPINFEYVCISRIPFCHPR*TRFACF
Trigger: AAAACAAGCAAATCGAGTGCACCTGGGATGACAAAA...GGGTATCCTACTGATACACACGTATTCAAAGTTTATGGGTACAACAAAGACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR GCA 90 bp TATGTCTTTGTTGTACCCATAAACTTTGAATACGTGTGTATCAGTAGGATACCCTTCTTCCTCCAGTGTTaGACAGGTAACTATTCTTGT +
Preference number: 4 (lower is better)
Translates to: YVFVVPINFEYVCISRIPFFLQC*TGNYSC
Trigger: ACAAGAATAGTTACCTGTGCAACACTGGAGGAAGAA...GGGTATCCTACTGATACACACGTATTCAAAGTTTATGGGTACAACAAAGACATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR GCA 90 bp TCATTTGGATGGTTTTTCATTATTAAGGTCCTTAGTGCACGAATGAGAGTTTCCTTCTTCCTCCAGTGTTaGACAGGTAACTATTCTTGT +
Preference number: 4 (lower is better)
Translates to: SFGWFFIIKVLSARMRVSFFLQC*TGNYSC
Trigger: ACAAGAATAGTTACCTGTGCAACACTGGAGGAAGAA...GGAAACTCTCATTCGTGCACTAAGGACCTTAATAATGAAAAACCATCCAAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR GCA 90 bp AGTTCTCAATCCGAACAGCTATTGCATGATTACAGAGATAGCCTACAATCTTTTAATCCGAACAGCTATTaGATGATTACAGAGATAGCC +
Preference number: 4 (lower is better)
Translates to: SSQSEQLLHDYRDSLQSFNPNSY*MITEIA
Trigger: GGCTATCTCTGTAATCATGCAATAGCTGTTCGGATT...AAAAGATTGTAGGCTATCTCTGTAATCATGCAATAGCTGTTCGGATTGAGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CCA 90 bp CCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGATAGAGGCCTCATTTGGATaGTTTTTCATTATTAAGGTC +
Preference number: 4 (lower is better)
Translates to: PLSYFYQLESSLRSCKEIEASFG*FFIIKV
Trigger: GACCTTAATAATGAAAAACCATCCAAATGAGGCCTC...TATCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR TCA 90 bp AGTTCTCAATCCGAACAGCTATTGCATGATTACAGAGATAGCCTACAATCTTTTAAACAACTAGTACCCTaGACCAAAGATTTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: SSQSEQLLHDYRDSLQSFKQLVP*TKDFAK
Trigger: TTTGGCAAAATCTTTGGTTCAGGGTACTAGTTGTTT...AAAAGATTGTAGGCTATCTCTGTAATCATGCAATAGCTGTTCGGATTGAGAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR GCA 90 bp TATGTCTTTGTTGTACCCATAAACTTTGAATACGTGTGTATCAGTAGGATACCCGATCATTCTTCAAGATaGCTTCAATATTGGCGAGAT +
Preference number: 4 (lower is better)
Translates to: YVFVVPINFEYVCISRIPDHSSR*LQYWRD
Trigger: ATCTCGCCAATATTGAAGGCATCTTGAAGAATGATC...GGGTATCCTACTGATACACACGTATTCAAAGTTTATGGGTACAACAAAGACATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR GCA 90 bp TTCCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGAGTGCTTGTAATAGGCTaGTGGTTTAATTTTAGAATC +
Preference number: 4 (lower is better)
Translates to: FPSAISINLNPLSDHVKRVLVIG*WFNFRI
Trigger: GATTCTAAAATTAAACCAGCAGCCTATTACAAGCAC...TCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR CCA 90 bp TTCCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGAAATGGCATGACCATTTaGGTAATGCATTATATTCCT +
Preference number: 4 (lower is better)
Translates to: FPSAISINLNPLSDHVKRNGMTI*VMHYIP
Trigger: AGGAATATAATGCATTACCCAAATGGTCATGCCATT...TCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR CCA 90 bp TCATTTGGATGGTTTTTCATTATTAAGGTCCTTAGTGCACGAATGAGAGTTTCCGAGGCCTCATTTGGATaGTTTTTCATTATTAAGGTC +
Preference number: 4 (lower is better)
Translates to: SFGWFFIIKVLSARMRVSEASFG*FFIIKV
Trigger: GACCTTAATAATGAAAAACCATCCAAATGAGGCCTC...GGAAACTCTCATTCGTGCACTAAGGACCTTAATAATGAAAAACCATCCAAATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR CCA 90 bp CCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGATATTTGTCGTTGAAATTTaGATTCAATTGCCTGTTGCA +
Preference number: 4 (lower is better)
Translates to: PLSYFYQLESSLRSCKEIFVVEI*IQLPVA
Trigger: TGCAACAGGCAATTGAATCCAAATTTCAACGACAAA...TATCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS CCA 90 bp TGCAGCGAGAGAGGGTGGCGGCGGCCGGCGAGCGGCGCTCCTCGCTaGGTCCCTGACAACAAAAGCGGCGGCGCGGCGGCTTCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: CSERGWRRPASGAPR*VPDNKSGGAAASCS
Trigger: GCTGCAGGAAGCCGCCGCGCCGCCGCTTTTGTTGTCAGGGACCCAGCGAGGAGCGCCGCTCGCCGGCCGCCGCCACCCTCTCTCGCTGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR CAA 90 bp CAGCTGATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGGTTTTCTTGCTCCAGTaGGGGCTTGGGTCGCAGCTG +
Preference number: 5 (lower is better)
Translates to: QLIGLSGRCSQRLIMAEEVFLLQ*GLGSQL
Trigger: CAGCTGCGACCCAAGCCCCAACTGGAGCAAGAAAAC...CTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAATCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CAA 90 bp TCTATTCCAGATCGATCTGCAGATACCAGGACAACAGCTGTAAACAAACTCATCTGCTCCAGTTGGGGCTaGGGTCGCAGCTGTTCCTGG +
Preference number: 5 (lower is better)
Translates to: SIPDRSADTRTTAVNKLICSSWG*GRSCSW
Trigger: CCAGGAACAGCTGCGACCCAAGCCCCAACTGGAGCA...GATGAGTTTGTTTACAGCTGTTGTCCTGGTATCTGCAGATCGATCTGGAATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR CAA 90 bp CTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTTCTCAATCCGAGTTTTCTTGCTCCAGTaGGGGCTTGGGTCGCAGCTG +
Preference number: 5 (lower is better)
Translates to: LSGRCSQRLIMAEEFSIRVFLLQ*GLGSQL
Trigger: CAGCTGCGACCCAAGCCCCAACTGGAGCAAGAAAAC...TCGGATTGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CAA 90 bp TTACAAAATAAGGCATTCTGCTCACACGTCATGAAAGTAACAGGCTTAGTACAGTGCTCCAGTTGGGGCTaGGGTCGCAGCTGTTCCTGG +
Preference number: 5 (lower is better)
Translates to: LQNKAFCSHVMKVTGLVQCSSWG*GRSCSW
Trigger: CCAGGAACAGCTGCGACCCAAGCCCCAACTGGAGCA...CTGTACTAAGCCTGTTACTTTCATGACGTGTGAGCAGAATGCCTTATTTTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR CAA 90 bp CAGCTGATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGCCTTTGAACTGTCCATaGAGATGCTGCTGGCTCTCA +
Preference number: 5 (lower is better)
Translates to: QLIGLSGRCSQRLIMAEEPLNCP*RCCWLS
Trigger: TGAGAGCCAGCAGCATCTCAATGGACAGTTCAAAGG...CTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAATCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CAA 90 bp AACTTCTCCAGTTTAAGTGCGACACAGCTGATTGGTCTATCAGGGAGATGCAGTGATCCCCTGCTCCCATaGAGTGTAAATCATCCACAC +
Preference number: 5 (lower is better)
Translates to: NFSSLSATQLIGLSGRCSDPLLP*SVNHPH
Trigger: GTGTGGATGATTTACACTCAATGGGAGCAGGGGATC...ACTGCATCTCCCTGATAGACCAATCAGCTGTGTCGCACTTAAACTGGAGAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CAA 90 bp CACAGAGTTGACGTTTTCTATTCCAGATCGATCTGCAGATACCAGGACAACAGCGCGAGATCACCATTCTaGGGATTACCATTGGTATCA +
Preference number: 5 (lower is better)
Translates to: HRVDVFYSRSICRYQDNSARSPF*GLPLVS
Trigger: TGATACCAATGGTAATCCCAAGAATGGTGATCTCGC...GCTGTTGTCCTGGTATCTGCAGATCGATCTGGAATAGAAAACGTCAACTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR CAA 90 bp TCTATTCCAGATCGATCTGCAGATACCAGGACAACAGCTGTAAACAAACTCATCCACCACTATGACTTTTaGTCATCCCAGGTGCACTCG +
Preference number: 5 (lower is better)
Translates to: SIPDRSADTRTTAVNKLIHHYDF*SSQVHS
Trigger: CGAGTGCACCTGGGATGACAAAAAGTCATAGTGGTG...GATGAGTTTGTTTACAGCTGTTGTCCTGGTATCTGCAGATCGATCTGGAATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR CAA 90 bp AACTTCTCCAGTTTAAGTGCGACACAGCTGATTGGTCTATCAGGGAGATGCAGTACCCAGGAATACGCTTaGCAAATTCCACCACTTCTT +
Preference number: 5 (lower is better)
Translates to: NFSSLSATQLIGLSGRCSTQEYA*QIPPLL
Trigger: AAGAAGTGGTGGAATTTGCAAAGCGTATTCCTGGGT...ACTGCATCTCCCTGATAGACCAATCAGCTGTGTCGCACTTAAACTGGAGAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CAA 90 bp CACAGAGTTGACGTTTTCTATTCCAGATCGATCTGCAGATACCAGGACAACAGCACCCAGGAATACGCTTaGCAAATTCCACCACTTCTT +
Preference number: 5 (lower is better)
Translates to: HRVDVFYSRSICRYQDNSTQEYA*QIPPLL
Trigger: AAGAAGTGGTGGAATTTGCAAAGCGTATTCCTGGGT...GCTGTTGTCCTGGTATCTGCAGATCGATCTGGAATAGAAAACGTCAACTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR CAA 90 bp AACTTCTCCAGTTTAAGTGCGACACAGCTGATTGGTCTATCAGGGAGATGCAGTAAGATGCCTTCAATATaGGCGAGATCACCATTCTTG +
Preference number: 5 (lower is better)
Translates to: NFSSLSATQLIGLSGRCSKMPSI*ARSPFL
Trigger: CAAGAATGGTGATCTCGCCAATATTGAAGGCATCTT...ACTGCATCTCCCTGATAGACCAATCAGCTGTGTCGCACTTAAACTGGAGAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CAA 90 bp CAGCTGATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGCAATCACTTCTTCCTTaGCAAAATCAGAAGATGGAG +
Preference number: 5 (lower is better)
Translates to: QLIGLSGRCSQRLIMAEEQSLLP*QNQKME
Trigger: CTCCATCTTCTGATTTTGCAAAGGAAGAAGTGATTG...CTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAATCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CAA 90 bp GTCCTGATTTATGAGGATCCACATATGGAGACTTACTCATTGGACAAACCTGTCTATTGCTCCATGTTCTaGGGAATCCGTTCTCCTCTC +
Preference number: 5 (lower is better)
Translates to: VLIYEDPHMETYSLDKPVYCSMF*GIRSPL
Trigger: GAGAGGAGAACGGATTCCCAAGAACATGGAGCAATA...GACAGGTTTGTCCAATGAGTAAGTCTCCATATGTGGATCCTCATAAATCAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR CAA 90 bp AACTTCTCCAGTTTAAGTGCGACACAGCTGATTGGTCTATCAGGGAGATGCAGTATGGAGACTTACTCATaGGACAAACCAGATGCATTC +
Preference number: 5 (lower is better)
Translates to: NFSSLSATQLIGLSGRCSMETYS*DKPDAF
Trigger: GAATGCATCTGGTTTGTCCAATGAGTAAGTCTCCAT...ACTGCATCTCCCTGATAGACCAATCAGCTGTGTCGCACTTAAACTGGAGAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR CAA 90 bp CTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTTCTCAATCCGAATTATATTCCTCCCTTaGAACTGTCCATTGAGATGC +
Preference number: 5 (lower is better)
Translates to: LSGRCSQRLIMAEEFSIRIIFLP*NCPLRC
Trigger: GCATCTCAATGGACAGTTCAAAGGGAGGAATATAAT...TCGGATTGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CAA 90 bp CAGCTGATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTCATACAATGTCCATTaGCAATACAAATGGCATGAC +
Preference number: 5 (lower is better)
Translates to: QLIGLSGRCSQRLIMAEESYNVH*QYKWHD
Trigger: GTCATGCCATTTGTATTGCAAATGGACATTGTATGA...CTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAATCAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CAA 90 bp CCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGATAGATCCCCTGCTCCCATaGAGTGTAAATCATCCACAC +
Preference number: 5 (lower is better)
Translates to: PLSYFYQLESSLRSCKEIDPLLP*SVNHPH
Trigger: GTGTGGATGATTTACACTCAATGGGAGCAGGGGATC...TATCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR CAA 90 bp ATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTTCTCAAAAGCCTCCACAGAGTaGACGTTTTCTATTCCAGAT +
Preference number: 5 (lower is better)
Translates to: IGLSGRCSQRLIMAEEFSKASTE*TFSIPD
Trigger: ATCTGGAATAGAAAACGTCAACTCTGTGGAGGCTTT...TGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CAA 90 bp CAGCTGATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGATAAAATCCTCAACTTaGGCTATTTCTCCTACTACC +
Preference number: 5 (lower is better)
Translates to: QLIGLSGRCSQRLIMAEEIKSST*AISPTT
Trigger: GGTAGTAGGAGAAATAGCCAAAGTTGAGGATTTTAT...CTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAATCAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR CAA 90 bp CAGCTGATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGCTGCTACACCTTGCTTaGCAAAGATGTTTACATAAA +
Preference number: 5 (lower is better)
Translates to: QLIGLSGRCSQRLIMAEELLHLA*QRCLHK
Trigger: TTTATGTAAACATCTTTGCAAAGCAAGGTGTAGCAG...CTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAATCAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR CAA 90 bp AGTTCTCAATCCGAACAGCTATTGCATGATTACAGAGATAGCCTACAATCTTTTCACCACTATGACTTTTaGTCATCCCAGGTGCACTCG +
Preference number: 5 (lower is better)
Translates to: SSQSEQLLHDYRDSLQSFHHYDF*SSQVHS
Trigger: CGAGTGCACCTGGGATGACAAAAAGTCATAGTGGTG...AAAAGATTGTAGGCTATCTCTGTAATCATGCAATAGCTGTTCGGATTGAGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CAA 90 bp CTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTTCTCAATCCGAGTACTGGATGTTTTGTaGAATACTTCTCCGAAAGAA +
Preference number: 5 (lower is better)
Translates to: LSGRCSQRLIMAEEFSIRVLDVL*NTSPKE
Trigger: TTCTTTCGGAGAAGTATTCAACAAAACATCCAGTAC...TCGGATTGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CAA 90 bp AACTTCTCCAGTTTAAGTGCGACACAGCTGATTGGTCTATCAGGGAGATGCAGTCTTGTACTGGATGTTTaGTTGAATACTTCTCCGAAA +
Preference number: 5 (lower is better)
Translates to: NFSSLSATQLIGLSGRCSLVLDV*LNTSPK
Trigger: TTTCGGAGAAGTATTCAACAAAACATCCAGTACAAG...ACTGCATCTCCCTGATAGACCAATCAGCTGTGTCGCACTTAAACTGGAGAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CAA 90 bp CACAGAGTTGACGTTTTCTATTCCAGATCGATCTGCAGATACCAGGACAACAGCCTTGTACTGGATGTTTaGTTGAATACTTCTCCGAAA +
Preference number: 5 (lower is better)
Translates to: HRVDVFYSRSICRYQDNSLVLDV*LNTSPK
Trigger: TTTCGGAGAAGTATTCAACAAAACATCCAGTACAAG...GCTGTTGTCCTGGTATCTGCAGATCGATCTGGAATAGAAAACGTCAACTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR CAA 90 bp TTACAAAATAAGGCATTCTGCTCACACGTCATGAAAGTAACAGGCTTAGTACAGACCGAACAGCATCTCTaGACATTCCAACAGACAGAC +
Preference number: 5 (lower is better)
Translates to: LQNKAFCSHVMKVTGLVQTEQHL*TFQQTD
Trigger: GTCTGTCTGTTGGAATGTCAAGAGATGCTGTTCGGT...CTGTACTAAGCCTGTTACTTTCATGACGTGTGAGCAGAATGCCTTATTTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR CAA 90 bp TTAGCAGATCCCCTGCTCCCATTGAGTGTAAATCATCCACACTATATTTCTTTCGGAGGAGAAGAGCTTTaGATGTTTTCTTGCTCCAGT +
Preference number: 5 (lower is better)
Translates to: LADPLLPLSVNHPHYISFGGEEL*MFSCSS
Trigger: ACTGGAGCAAGAAAACATCAAAAGCTCTTCTCCTCC...GAAAGAAATATAGTGTGGATGATTTACACTCAATGGGAGCAGGGGATCTGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR CAA 90 bp TTACAAAATAAGGCATTCTGCTCACACGTCATGAAAGTAACAGGCTTAGTACAGTATTGCTCCATGTTCTaGGGAATCCGTTCTCCTCTC +
Preference number: 5 (lower is better)
Translates to: LQNKAFCSHVMKVTGLVQYCSMF*GIRSPL
Trigger: GAGAGGAGAACGGATTCCCAAGAACATGGAGCAATA...CTGTACTAAGCCTGTTACTTTCATGACGTGTGAGCAGAATGCCTTATTTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR CAA 90 bp ATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTTCTCATCCTCAGAGTGCATGTaGTTTAAAGATCGAAGATCT +
Preference number: 5 (lower is better)
Translates to: IGLSGRCSQRLIMAEEFSSSECM*FKDRRS
Trigger: AGATCTTCGATCTTTAAACAACATGCACTCTGAGGA...TGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CAA 90 bp CTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTTCTCAATCCGACCTAATTTGGGTCTTTaGACACCTCTTGTTTTAAGT +
Preference number: 5 (lower is better)
Translates to: LSGRCSQRLIMAEEFSIRPNLGL*TPLVLS
Trigger: ACTTAAAACAAGAGGTGTCAAAAGACCCAAATTAGG...TCGGATTGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS TCA 90 bp GTGAAGCTCATCGAAAATTCTTCCCAGATTTCATGTCCTGATTTATaGGGATCCACATATGGAGACTTACTCATTGGACAAACCAGATGC +
Preference number: 5 (lower is better)
Translates to: VKLIENSSQISCPDL*GSTYGDLLIGQTRC
Trigger: GCATCTGGTTTGTCCAATGAGTAAGTCTCCATATGTGGATCCTCATAAATCAGGACATGAAATCTGGGAAGAATTTTCGATGAGCTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000492552.5
CDS-3UTR CAA 90 bp TTCCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGAGCGAGATCACCATTCTaGGGATTACCATTGGTATCA +
Preference number: 5 (lower is better)
Translates to: FPSAISINLNPLSDHVKRARSPF*GLPLVS
Trigger: TGATACCAATGGTAATCCCAAGAATGGTGATCTCGC...TCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR CAA 90 bp TTAGCAGATCCCCTGCTCCCATTGAGTGTAAATCATCCACACTATATTTCTTTCAAGATGCCTTCAATATaGGCGAGATCACCATTCTTG +
Preference number: 5 (lower is better)
Translates to: LADPLLPLSVNHPHYISFKMPSI*ARSPFL
Trigger: CAAGAATGGTGATCTCGCCAATATTGAAGGCATCTT...GAAAGAAATATAGTGTGGATGATTTACACTCAATGGGAGCAGGGGATCTGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR CAA 90 bp ATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTTCTCAGTACTGGATGTTTTGTaGAATACTTCTCCGAAAGAA +
Preference number: 5 (lower is better)
Translates to: IGLSGRCSQRLIMAEEFSVLDVL*NTSPKE
Trigger: TTCTTTCGGAGAAGTATTCAACAAAACATCCAGTAC...TGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CAA 90 bp TATGTCTTTGTTGTACCCATAAACTTTGAATACGTGTGTATCAGTAGGATACCCACCGAACAGCATCTCTaGACATTCCAACAGACAGAC +
Preference number: 5 (lower is better)
Translates to: YVFVVPINFEYVCISRIPTEQHL*TFQQTD
Trigger: GTCTGTCTGTTGGAATGTCAAGAGATGCTGTTCGGT...GGGTATCCTACTGATACACACGTATTCAAAGTTTATGGGTACAACAAAGACATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CAA 90 bp GTCCTGATTTATGAGGATCCACATATGGAGACTTACTCATTGGACAAACCTGTCCAATCACTTCTTCCTTaGCAAAATCAGAAGATGGAG +
Preference number: 5 (lower is better)
Translates to: VLIYEDPHMETYSLDKPVQSLLP*QNQKME
Trigger: CTCCATCTTCTGATTTTGCAAAGGAAGAAGTGATTG...GACAGGTTTGTCCAATGAGTAAGTCTCCATATGTGGATCCTCATAAATCAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR CAA 90 bp ATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTTCTCAAAATGGCATGACCATTaGGGTAATGCATTATATTCC +
Preference number: 5 (lower is better)
Translates to: IGLSGRCSQRLIMAEEFSKWHDH*GNALYS
Trigger: GGAATATAATGCATTACCCAAATGGTCATGCCATTT...TGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CAA 90 bp ATTGGTCTATCAGGGAGATGCAGTCAACGTCTAATCATGGCTGAAGAGTTCTCAGGATTCAATTGCCTGTaGCACTTTTACATTAAGTGT +
Preference number: 5 (lower is better)
Translates to: IGLSGRCSQRLIMAEEFSGFNCL*HFYIKC
Trigger: ACACTTAATGTAAAAGTGCAACAGGCAATTGAATCC...TGAGAACTCTTCAGCCATGATTAGACGTTGACTGCATCTCCCTGATAGACCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CAA 90 bp TTCCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGACTGAGCTGCTACACCTaGCTTTGCAAAGATGTTTAC +
Preference number: 5 (lower is better)
Translates to: FPSAISINLNPLSDHVKRLSCYT*LCKDVY
Trigger: GTAAACATCTTTGCAAAGCAAGGTGTAGCAGCTCAG...TCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS GCA 90 bp GAGACTTACTCATTGGACAAACCAGATGCATTCTTCCTCCAGTGTTaGACAGGTAACTATTCTTGTTCTCATTCTGAGAAAATCCATCTA +
Preference number: 5 (lower is better)
Translates to: ETYSLDKPDAFFLQC*TGNYSCSHSEKIHL
Trigger: TAGATGGATTTTCTCAGAATGAGAACAAGAATAGTTACCTGTGCAACACTGGAGGAAGAATGCATCTGGTTTGTCCAATGAGTAAGTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000492552.5
CDS-3UTR CAA 90 bp TTACAAAATAAGGCATTCTGCTCACACGTCATGAAAGTAACAGGCTTAGTACAGCCAGGTGCACTCGATTaGCTTGTTTTCATAGAACAA +
Preference number: 5 (lower is better)
Translates to: LQNKAFCSHVMKVTGLVQPGALD*LVFIEQ
Trigger: TTGTTCTATGAAAACAAGCAAATCGAGTGCACCTGG...CTGTACTAAGCCTGTTACTTTCATGACGTGTGAGCAGAATGCCTTATTTTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR CAA 90 bp AGTTCTCAATCCGAACAGCTATTGCATGATTACAGAGATAGCCTACAATCTTTTGGAGGAGAAGAGCTTTaGATGTTTTCTTGCTCCAGT +
Preference number: 5 (lower is better)
Translates to: SSQSEQLLHDYRDSLQSFGGEEL*MFSCSS
Trigger: ACTGGAGCAAGAAAACATCAAAAGCTCTTCTCCTCC...AAAAGATTGTAGGCTATCTCTGTAATCATGCAATAGCTGTTCGGATTGAGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CAA 90 bp GTCCTGATTTATGAGGATCCACATATGGAGACTTACTCATTGGACAAACCTGTCAAATGGCATGACCATTaGGGTAATGCATTATATTCC +
Preference number: 5 (lower is better)
Translates to: VLIYEDPHMETYSLDKPVKWHDH*GNALYS
Trigger: GGAATATAATGCATTACCCAAATGGTCATGCCATTT...GACAGGTTTGTCCAATGAGTAAGTCTCCATATGTGGATCCTCATAAATCAGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR CAA 90 bp TTAGCAGATCCCCTGCTCCCATTGAGTGTAAATCATCCACACTATATTTCTTTCTCCTCAGAGTGCATGTaGTTTAAAGATCGAAGATCT +
Preference number: 5 (lower is better)
Translates to: LADPLLPLSVNHPHYISFSSECM*FKDRRS
Trigger: AGATCTTCGATCTTTAAACAACATGCACTCTGAGGA...GAAAGAAATATAGTGTGGATGATTTACACTCAATGGGAGCAGGGGATCTGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR CAA 90 bp TTAGCAGATCCCCTGCTCCCATTGAGTGTAAATCATCCACACTATATTTCTTTCGTGGTACTGCTGTTTTaGGTGAAATTTTGGCTGAAT +
Preference number: 5 (lower is better)
Translates to: LADPLLPLSVNHPHYISFVVLLF*VKFWLN
Trigger: ATTCAGCCAAAATTTCACCAAAAACAGCAGTACCAC...GAAAGAAATATAGTGTGGATGATTTACACTCAATGGGAGCAGGGGATCTGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS GCA 90 bp TTGGCTGAATATGAACACTGTACAGATGCATTCTTCCTCCAGTGTTaGACAGGTAACTATTCTTGTTCTCATTCTGAGAAAATCCATCTA +
Preference number: 5 (lower is better)
Translates to: LAEYEHCTDAFFLQC*TGNYSCSHSEKIHL
Trigger: TAGATGGATTTTCTCAGAATGAGAACAAGAATAGTTACCTGTGCAACACTGGAGGAAGAATGCATCTGTACAGTGTTCATATTCAGCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR CAA 90 bp AGTTCTCAATCCGAACAGCTATTGCATGATTACAGAGATAGCCTACAATCTTTTAAAGCCTCCACAGAGTaGACGTTTTCTATTCCAGAT +
Preference number: 5 (lower is better)
Translates to: SSQSEQLLHDYRDSLQSFKASTE*TFSIPD
Trigger: ATCTGGAATAGAAAACGTCAACTCTGTGGAGGCTTT...AAAAGATTGTAGGCTATCTCTGTAATCATGCAATAGCTGTTCGGATTGAGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CAA 90 bp TTAGCAGATCCCCTGCTCCCATTGAGTGTAAATCATCCACACTATATTTCTTTCGGATTCAATTGCCTGTaGCACTTTTACATTAAGTGT +
Preference number: 5 (lower is better)
Translates to: LADPLLPLSVNHPHYISFGFNCL*HFYIKC
Trigger: ACACTTAATGTAAAAGTGCAACAGGCAATTGAATCC...GAAAGAAATATAGTGTGGATGATTTACACTCAATGGGAGCAGGGGATCTGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR CAA 90 bp GTACGTTCCTTTGCATCAAATAATGATGCGAACCGTACCATTAAAACCTCAAAAATGGAGACTTACTCATaGGACAAACCTGTCAGTAGA +
Preference number: 5 (lower is better)
Translates to: VRSFASNNDANRTIKTSKMETYS*DKPVSR
Trigger: TCTACTGACAGGTTTGTCCAATGAGTAAGTCTCCAT...TTTTGAGGTTTTAATGGTACGGTTCGCATCATTATTTGATGCAAAGGAACGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR CAA 90 bp TATGTCTTTGTTGTACCCATAAACTTTGAATACGTGTGTATCAGTAGGATACCCCTTTTTGAAGCGACATaGCTGACATCTGTTCCTATT +
Preference number: 5 (lower is better)
Translates to: YVFVVPINFEYVCISRIPLFEAT*LTSVPI
Trigger: AATAGGAACAGATGTCAGCAATGTCGCTTCAAAAAG...GGGTATCCTACTGATACACACGTATTCAAAGTTTATGGGTACAACAAAGACATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS-3UTR CAA 90 bp GTACGTTCCTTTGCATCAAATAATGATGCGAACCGTACCATTAAAACCTCAAAACTTTTTGAAGCGACATaGCTGACATCTGTTCCTATT +
Preference number: 5 (lower is better)
Translates to: VRSFASNNDANRTIKTSKLFEAT*LTSVPI
Trigger: AATAGGAACAGATGTCAGCAATGTCGCTTCAAAAAG...TTTTGAGGTTTTAATGGTACGGTTCGCATCATTATTTGATGCAAAGGAACGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS-3UTR CAA 90 bp CCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGATACCTAATTTGGGTCTTTaGACACCTCTTGTTTTAAGT +
Preference number: 5 (lower is better)
Translates to: PLSYFYQLESSLRSCKEIPNLGL*TPLVLS
Trigger: ACTTAAAACAAGAGGTGTCAAAAGACCCAAATTAGG...TATCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS-3UTR CAA 90 bp TTCCCCTCAGCTATTTCTATCAACTTGAATCCTCTCTCAGATCATGTAAAGAGACCTGAACCAAAGATTTaGCCAAAGATGAACTCTAAA +
Preference number: 5 (lower is better)
Translates to: FPSAISINLNPLSDHVKRPEPKI*PKMNSK
Trigger: TTTAGAGTTCATCTTTGGCAAAATCTTTGGTTCAGG...TCTCTTTACATGATCTGAGAGAGGATTCAAGTTGATAGAAATAGCTGAGGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS CCA 90 bp ATCCATCTATCGGAACTCTATCACATACTCTTTGAGTATAAGCATTaGAGAAGTTCATACAATGTCCATTTGCAATACAAATGGCATGAC +
Preference number: 5 (lower is better)
Translates to: IHLSELYHILFEYKH*RSSYNVHLQYKWHD
Trigger: GTCATGCCATTTGTATTGCAAATGGACATTGTATGAACTTCTCCAATGCTTATACTCAAAGAGTATGTGATAGAGTTCCGATAGATGGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312521.9
ENST00000383773.8
ENST00000492552.5
CDS TCA 72 bp GCGGCGGCCGGCGAGCGGCGCTCCTCGCTGGGTCCCTaGCAACAAAAGCGGCGGCGCGGCGGCTTCCTGCAG +
Preference number: 6 (lower is better)
Translates to: AAAGERRSSLGP*QQKRRRGGFLQ
Trigger: CTGCAGGAAGCCGCCGCGCCGCCGCTTTTGTTGTCAGGGACCCAGCGAGGAGCGCCGCTCGCCGGCCGCCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS CCA 72 bp AGAGGGTGGCGGCGGCCGGCGAGCGGCGCTCCTCGCTaGGTCCCTGACAACAAAAGCGGCGGCGCGGCGGCT +
Preference number: 6 (lower is better)
Translates to: RGWRRPASGAPR*VPDNKSGGAAA
Trigger: AGCCGCCGCGCCGCCGCTTTTGTTGTCAGGGACCCAGCGAGGAGCGCCGCTCGCCGGCCGCCGCCACCCTCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS GCA 72 bp GTCCCTGACAACAAAAGCGGCGGCGCGGCGGCTTCCTaGAGCCAGCGCACCGCGGCGGCGAGGGCGGCTGAC +
Preference number: 6 (lower is better)
Translates to: VPDNKSGGAAAS*SQRTAAARAAD
Trigger: GTCAGCCGCCCTCGCCGCCGCGGTGCGCTGGCTGCAGGAAGCCGCCGCGCCGCCGCTTTTGTTGTCAGGGAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312521.9
CDS GCA 72 bp TCACACCTCCTCGCGAAAAGAGCGTGCGGCGTCCGGTaGACTGCGGTGTCAGCGCCCGCTTCGGGGACGCCC +
Preference number: 6 (lower is better)
Translates to: SHLLAKRACGVR*TAVSAPASGTP
Trigger: GGGCGTCCCCGAAGCGGGCGCTGACACCGCAGTGCACCGGACGCCGCACGCTCTTTTCGCGAGGAGGTGTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492552.5
CDS GCA 72 bp TATAGGCAATCACACCTCCTGCATTCACCTCCATGGTaGCCTCGCGGAGGCGGCCGGGGCCGCCCGCTTCCC +
Preference number: 6 (lower is better)
Translates to: YRQSHLLHSPPW*PRGGGRGRPLP
Trigger: GGGAAGCGGGCGGCCCCGGCCGCCTCCGCGAGGGCACCATGGAGGTGAATGCAGGAGGTGTGATTGCCTATA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS TCA 72 bp GACAAGAGGCAGGGCTTGAGGCTGAGCTGGAAGAACTaGTATAGGCAATCACACCTCCTCGCGAAAAGAGCG +
Preference number: 6 (lower is better)
Translates to: DKRQGLRLSWKN*YRQSHLLAKRA
Trigger: CGCTCTTTTCGCGAGGAGGTGTGATTGCCTATATCAGTTCTTCCAGCTCAGCCTCAAGCCCTGCCTCTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492552.5
CDS TCA 72 bp GACAAGAGGCAGGGCTTGAGGCTGAGCTGGAAGAACTaGTATAGGCAATCACACCTCCTGCATTCACCTCCA +
Preference number: 6 (lower is better)
Translates to: DKRQGLRLSWKN*YRQSHLLHSPP
Trigger: TGGAGGTGAATGCAGGAGGTGTGATTGCCTATATCAGTTCTTCCAGCTCAGCCTCAAGCCCTGCCTCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312521.9
ENST00000383773.8
CDS CCA 72 bp ATATTCCTCCCTTTGAACTGTCCATTGAGATGCTGCTaGCTCTCACTACAGGGAAAATGGCTGCTAAGCCCA +
Preference number: 6 (lower is better)
Translates to: IFLPLNCPLRCC*LSLQGKWLLSP
Trigger: TGGGCTTAGCAGCCATTTTCCCTGTAGTGAGAGCCAGCAGCATCTCAATGGACAGTTCAAAGGGAGGAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312521.9
ENST00000383773.8
ENST00000492552.5
CDS GCA 72 bp TGCATTATATTCCTCCCTTTGAACTGTCCATTGAGATaGTGCTGGCTCTCACTACAGGGAAAATGGCTGCTA +
Preference number: 6 (lower is better)
Translates to: CIIFLPLNCPLR*CWLSLQGKWLL
Trigger: TAGCAGCCATTTTCCCTGTAGTGAGAGCCAGCAGCATCTCAATGGACAGTTCAAAGGGAGGAATATAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312521.9
ENST00000383773.8
ENST00000492552.5
CDS TCA 72 bp AGTAGAACCATGCCACTAAATTTTGTCACACCACTATaGCTTTTTGTCATCCCAGGTGCACTCGATTTGCTT +
Preference number: 6 (lower is better)
Translates to: SRTMPLNFVTPL*LFVIPGALDLL
Trigger: AAGCAAATCGAGTGCACCTGGGATGACAAAAAGTCATAGTGGTGTGACAAAATTTAGTGGCATGGTTCTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312521.9
ENST00000383773.8
ENST00000468700.1
ENST00000492552.5
CDS GCA 72 bp CTGAACTGGCTGTTCATCATGGTCTTCATTGCACTTTaGATTTCAATTAGCATCCTCTGTTTTTCACGCTTA +
Preference number: 6 (lower is better)
Translates to: LNWLFIMVFIAL*ISISILCFSRL
Trigger: TAAGCGTGAAAAACAGAGGATGCTAATTGAAATGCAAAGTGCAATGAAGACCATGATGAACAGCCAGTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312521.9
ENST00000383773.8
ENST00000468700.1
ENST00000492552.5
CDS CAA 90 bp CGATCATTCTTCAAGATGCCTTCAATATTGGCGAGATCACCATTCTaGGGATTACCATTGGTATCAGAATTAGAGCTATTTGGAGAAGAT +
Preference number: 6 (lower is better)
Translates to: RSFFKMPSILARSPF*GLPLVSELELFGED
Trigger: ATCTTCTCCAAATAGCTCTAATTCTGATACCAATGGTAATCCCAAGAATGGTGATCTCGCCAATATTGAAGGCATCTTGAAGAATGATCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312521.9
ENST00000383773.8
ENST00000468700.1
ENST00000492552.5
CDS CAA 72 bp CAATCTATTCGATCATTCTTCAAGATGCCTTCAATATaGGCGAGATCACCATTCTTGGGATTACCATTGGTA +
Preference number: 6 (lower is better)
Translates to: QSIRSFFKMPSI*ARSPFLGLPLV
Trigger: TACCAATGGTAATCCCAAGAATGGTGATCTCGCCAATATTGAAGGCATCTTGAAGAATGATCGAATAGATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312521.9
ENST00000383773.8
ENST00000468700.1
ENST00000492552.5
CDS CCA 72 bp AATCTATTCGATCATTCTTCAAGATGCCTTCAATATTaGCGAGATCACCATTCTTGGGATTACCATTGGTAT +
Preference number: 6 (lower is better)
Translates to: NLFDHSSRCLQY*RDHHSWDYHWY
Trigger: ATACCAATGGTAATCCCAAGAATGGTGATCTCGCCAATATTGAAGGCATCTTGAAGAATGATCGAATAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312521.9
ENST00000383773.8
ENST00000468700.1
ENST00000492552.5
CDS CCA 72 bp TCAGTAGAAAATACCAAGCACTATCAAAGGACTTCATaGTTTAAACTGGAAATGGTGTGGTACTGCTGTTTT +
Preference number: 6 (lower is better)
Translates to: SVENTKHYQRTS*FKLEMVWYCCF
Trigger: AAAACAGCAGTACCACACCATTTCCAGTTTAAACCATGAAGTCCTTTGATAGTGCTTGGTATTTTCTACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383773.8
CDS CAA 72 bp GAGTATAAGCATTGGAGAAGTTCATACAATGTCCATTaGCAATACAAATGGCATGACCATTTGGGTAATGCA +
Preference number: 6 (lower is better)
Translates to: EYKHWRSSYNVH*QYKWHDHLGNA
Trigger: TGCATTACCCAAATGGTCATGCCATTTGTATTGCAAATGGACATTGTATGAACTTCTCCAATGCTTATACTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312521.9
ENST00000383773.8
ENST00000492552.5
CDS CAA 90 bp TTCATAGAACAATCTATTCGATCATTCTTCAAGATGCCTTCAATATaGGCGAGATCACCATTCTTGGGATTACCATTGGTATCAGAATTA +
Preference number: 6 (lower is better)
Translates to: FIEQSIRSFFKMPSI*ARSPFLGLPLVSEL
Trigger: TAATTCTGATACCAATGGTAATCCCAAGAATGGTGATCTCGCCAATATTGAAGGCATCTTGAAGAATGATCGAATAGATTGTTCTATGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312521.9
ENST00000383773.8
ENST00000468700.1
ENST00000492552.5
CDS CAA 72 bp CTGATTTATGAGGATCCACATATGGAGACTTACTCATaGGACAAACCTAGTATACATAAAACGGAAAAACTC +
Preference number: 6 (lower is better)
Translates to: LIYEDPHMETYS*DKPSIHKTEKL
Trigger: GAGTTTTTCCGTTTTATGTATACTAGGTTTGTCCAATGAGTAAGTCTCCATATGTGGATCCTCATAAATCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472780.1
CDS CCA 72 bp TCGGAACTCTATCACATACTCTTTGAGTATAAGCATTaGAGAAGTTCATACAATGTCCATTTGCAATACAAA +
Preference number: 6 (lower is better)
Translates to: SELYHILFEYKH*RSSYNVHLQYK
Trigger: TTTGTATTGCAAATGGACATTGTATGAACTTCTCCAATGCTTATACTCAAAGAGTATGTGATAGAGTTCCGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312521.9
ENST00000383773.8
ENST00000492552.5