Pregenerated sensors for NR0B2 (Homo sapiens)
Ensembl gene IDs: ENSG00000131910Ensembl transcript IDs: ENST00000254227.4
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGAGCCAAGTGCTGTCTATACAGGCTTGCCCCCTCCAGGAGCATTaGGTCACCTCTGGGGATGGCCAGGCTGAATCAGCACTGCCAGCC | + |
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Preference number: 1 (lower is better) Translates to: RSQVLSIQACPLQEH*VTSGDGQAESALPA Trigger: GGCTGGCAGTGCTGATTCAGCCTGGCCATCCCCAGAGGTGACCCAATGCTCCTGGAGGGGGCAAGCCTGTATAGACAGCACTTGGCTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| 3UTR GCA 90 bp | AGTGAAGAGCTGTTCCTAAGGAGCCAAGTGCTGTCTATACAGGCTTaGCCCCTCCAGGAGCATTGGGTCACCTCTGGGGATGGCCAGGCT | + |
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Preference number: 1 (lower is better) Translates to: SEELFLRSQVLSIQA*PLQEHWVTSGDGQA Trigger: AGCCTGGCCATCCCCAGAGGTGACCCAATGCTCCTGGAGGGGGCAAGCCTGTATAGACAGCACTTGGCTCCTTAGGAACAGCTCTTCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| 3UTR CCA 90 bp | AGCAGCCTAAGCTTTCATTCTCATCCCAAGAAGGGACAGGAGTCTTaGCCCAGAGGCTGTGGGGACCACCAAAAGCCTCCCAGGCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: SSLSFHSHPKKGQES*PRGCGDHQKPPRQL Trigger: CAGCTGCCTGGGAGGCTTTTGGTGGTCCCCACAGCCTCTGGGCCAAGACTCCTGTCCCTTCTTGGGATGAGAATGAAAGCTTAGGCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| 3UTR TCA 90 bp | ACACTGTGTCCAAACCAAGGAAGTCCAATGTGGGGTGTGGCTGAGTaGAGAGCTGTTCCTAAGGAGCCAAGTGCTGTCTATACAGGCTTG | + |
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Preference number: 1 (lower is better) Translates to: TLCPNQGSPMWGVAE*RAVPKEPSAVYTGL Trigger: CAAGCCTGTATAGACAGCACTTGGCTCCTTAGGAACAGCTCTTCACTCAGCCACACCCCACATTGGACTTCCTTGGTTTGGACACAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| 3UTR CCA 90 bp | CAGCTGGAACACTGTGTCCAAACCAAGGAAGTCCAATGTGGGGTGTaGCTGAGTGAAGAGCTGTTCCTAAGGAGCCAAGTGCTGTCTATA | + |
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Preference number: 1 (lower is better) Translates to: QLEHCVQTKEVQCGV*LSEELFLRSQVLSI Trigger: TATAGACAGCACTTGGCTCCTTAGGAACAGCTCTTCACTCAGCCACACCCCACATTGGACTTCCTTGGTTTGGACACAGTGTTCCAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| 3UTR-3UTR CCA 90 bp | CAGGAGTCTTGGCCCAGAGGCTGTGGGGACCACCAAAAGCCTCCCAGGCAGCTGCCCCTCCAGGAGCATTaGGTCACCTCTGGGGATGGC | + |
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Preference number: 2 (lower is better) Translates to: QESWPRGCGDHQKPPRQLPLQEH*VTSGDG Trigger: GCCATCCCCAGAGGTGACCCAATGCTCCTGGAGGGG...CAGCTGCCTGGGAGGCTTTTGGTGGTCCCCACAGCCTCTGGGCCAAGACTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| 3UTR-3UTR GCA 90 bp | AGGAGTCTTGGCCCAGAGGCTGTGGGGACCACCAAAAGCCTCCCAGGCAGCTGGAGCACTGCCAGCCTCTaGCCACCTGATCTCTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: RSLGPEAVGTTKSLPGSWSTASL*PPDLCL Trigger: CAGGCAGAGATCAGGTGGGCAGAGGCTGGCAGTGCT...CCAGCTGCCTGGGAGGCTTTTGGTGGTCCCCACAGCCTCTGGGCCAAGACTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| 3UTR-3UTR CCA 90 bp | AGGAGTCTTGGCCCAGAGGCTGTGGGGACCACCAAAAGCCTCCCAGGCAGCTGGGTCCAATGTGGGGTGTaGCTGAGTGAAGAGCTGTTC | + |
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Preference number: 2 (lower is better) Translates to: RSLGPEAVGTTKSLPGSWVQCGV*LSEELF Trigger: GAACAGCTCTTCACTCAGCCACACCCCACATTGGAC...CCAGCTGCCTGGGAGGCTTTTGGTGGTCCCCACAGCCTCTGGGCCAAGACTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| 3UTR-3UTR CAA 90 bp | GGACAGGAGTCTTGGCCCAGAGGCTGTGGGGACCACCAAAAGCCTCCCAGGCAGGCTGTCTATACAGGCTaGCCCCCTCCAGGAGCATTG | + |
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Preference number: 3 (lower is better) Translates to: GQESWPRGCGDHQKPPRQAVYTG*PPPGAL Trigger: CAATGCTCCTGGAGGGGGCAAGCCTGTATAGACAGC...CTGCCTGGGAGGCTTTTGGTGGTCCCCACAGCCTCTGGGCCAAGACTCCTGTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| 3UTR CCA 72 bp | GTGCTGTCTATACAGGCTTGCCCCCTCCAGGAGCATTaGGTCACCTCTGGGGATGGCCAGGCTGAATCAGCA | + |
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Preference number: 3 (lower is better) Translates to: VLSIQACPLQEH*VTSGDGQAESA Trigger: TGCTGATTCAGCCTGGCCATCCCCAGAGGTGACCCAATGCTCCTGGAGGGGGCAAGCCTGTATAGACAGCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| 3UTR GCA 72 bp | CTGTTCCTAAGGAGCCAAGTGCTGTCTATACAGGCTTaGCCCCTCCAGGAGCATTGGGTCACCTCTGGGGAT | + |
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Preference number: 3 (lower is better) Translates to: LFLRSQVLSIQA*PLQEHWVTSGD Trigger: ATCCCCAGAGGTGACCCAATGCTCCTGGAGGGGGCAAGCCTGTATAGACAGCACTTGGCTCCTTAGGAACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| 3UTR TCA 72 bp | CCAAACCAAGGAAGTCCAATGTGGGGTGTGGCTGAGTaGAGAGCTGTTCCTAAGGAGCCAAGTGCTGTCTAT | + |
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Preference number: 3 (lower is better) Translates to: PNQGSPMWGVAE*RAVPKEPSAVY Trigger: ATAGACAGCACTTGGCTCCTTAGGAACAGCTCTTCACTCAGCCACACCCCACATTGGACTTCCTTGGTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR GCA 90 bp | CAGAGGCTGTGGGGACCACCAAAAGCCTCCCAGGCAGCTGGAACACTGTGTCCAGGGCCCCAGCAACCCTaGAGCAGCCGCCGCTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: QRLWGPPKASQAAGTLCPGPQQP*SSRRWS Trigger: GGACCAGCGGCGGCTGCTGCAGGGTTGCTGGGGCCC...TGGACACAGTGTTCCAGCTGCCTGGGAGGCTTTTGGTGGTCCCCACAGCCTCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR GCA 90 bp | CAGGCTTGCCCCCTCCAGGAGCATTGGGTCACCTCTGGGGATGGCCAGGCTGAACTGGCAGTTGGCCACTaGCTCCACTGCTGCTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: QACPLQEHWVTSGDGQAELAVGH*LHCCWA Trigger: AGCCCAGCAGCAGTGGAGGCAGTGGCCAACTGCCAG...TTCAGCCTGGCCATCCCCAGAGGTGACCCAATGCTCCTGGAGGGGGCAAGCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR TCA 90 bp | CCCTCCAGGAGCATTGGGTCACCTCTGGGGATGGCCAGGCTGAATCAGCACTGCGTCGGGGGACAGCCTTaGGGCTGGAGCTCAGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: PSRSIGSPLGMARLNQHCVGGQP*GWSSEV Trigger: CACTTCTGAGCTCCAGCCTCAAGGCTGTCCCCCGAC...GCAGTGCTGATTCAGCCTGGCCATCCCCAGAGGTGACCCAATGCTCCTGGAGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR GCA 90 bp | GGACAGGAGTCTTGGCCCAGAGGCTGTGGGGACCACCAAAAGCCTCCCAGGCAGAGGCCTCCCGGCAGGTaGGATGAGGTGCACATAGCT | + |
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Preference number: 4 (lower is better) Translates to: GQESWPRGCGDHQKPPRQRPPGR*DEVHIA Trigger: AGCTATGTGCACCTCATCGCACCTGCCGGGAGGCCT...CTGCCTGGGAGGCTTTTGGTGGTCCCCACAGCCTCTGGGCCAAGACTCCTGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR GCA 90 bp | AGGAGTCTTGGCCCAGAGGCTGTGGGGACCACCAAAAGCCTCCCAGGCAGCTGGCACTGCCTCCACTGCTaGTGGGCTCCTCCAGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: RSLGPEAVGTTKSLPGSWHCLHC*WAPPAE Trigger: TTCTGCTGGAGGAGCCCAGCAGCAGTGGAGGCAGTG...CCAGCTGCCTGGGAGGCTTTTGGTGGTCCCCACAGCCTCTGGGCCAAGACTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR CCA 90 bp | ACAGGAGTCTTGGCCCAGAGGCTGTGGGGACCACCAAAAGCCTCCCAGGCAGCTGCATGGGCAGGCCCCTaGTTGGCTGGTGCTCATGGT | + |
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Preference number: 4 (lower is better) Translates to: TGVLAQRLWGPPKASQAAAWAGP*LAGAHG Trigger: ACCATGAGCACCAGCCAACCAGGGGCCTGCCCATGC...AGCTGCCTGGGAGGCTTTTGGTGGTCCCCACAGCCTCTGGGCCAAGACTCCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR CCA 90 bp | CCCTCCAGGAGCATTGGGTCACCTCTGGGGATGGCCAGGCTGAATCAGCACTGCGGCGGCTTGGAGGCCTaGCACATCGGGGTTGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: PSRSIGSPLGMARLNQHCGGLEA*HIGVEE Trigger: CTCTTCAACCCCGATGTGCCAGGCCTCCAAGCCGCC...GCAGTGCTGATTCAGCCTGGCCATCCCCAGAGGTGACCCAATGCTCCTGGAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR CCA 90 bp | TGTCTATACAGGCTTGCCCCCTCCAGGAGCATTGGGTCACCTCTGGGGATGGCCATGTGGGAGGCGGCTTaGAGGCCTGGCACATCGGGG | + |
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Preference number: 4 (lower is better) Translates to: CLYRLAPSRSIGSPLGMAMWEAA*RPGTSG Trigger: CCCCGATGTGCCAGGCCTCCAAGCCGCCTCCCACAT...GGCCATCCCCAGAGGTGACCCAATGCTCCTGGAGGGGGCAAGCCTGTATAGACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR CCA 90 bp | AGGCTTGCCCCCTCCAGGAGCATTGGGTCACCTCTGGGGATGGCCAGGCTGAATCCCCTCCAGGAGCATTaGGTCACCTCTGGGGATGGC | + |
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Preference number: 4 (lower is better) Translates to: RLAPSRSIGSPLGMARLNPLQEH*VTSGDG Trigger: GCCATCCCCAGAGGTGACCCAATGCTCCTGGAGGGG...ATTCAGCCTGGCCATCCCCAGAGGTGACCCAATGCTCCTGGAGGGGGCAAGCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR TCA 90 bp | TGTCTATACAGGCTTGCCCCCTCCAGGAGCATTGGGTCACCTCTGGGGATGGCCTCCCGGCAGGTGCGATaGGGTGCACATAGCTGGACG | + |
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Preference number: 4 (lower is better) Translates to: CLYRLAPSRSIGSPLGMASRQVR*GAHSWT Trigger: CGTCCAGCTATGTGCACCTCATCGCACCTGCCGGGA...GGCCATCCCCAGAGGTGACCCAATGCTCCTGGAGGGGGCAAGCCTGTATAGACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR TCA 90 bp | TACAGGCTTGCCCCCTCCAGGAGCATTGGGTCACCTCTGGGGATGGCCAGGCTGAGGATGGCAGGTTCCTaGGGAAGGCCACTGTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: YRLAPSRSIGSPLGMARLRMAGS*GRPLSW Trigger: CCAAGACAGTGGCCTTCCTCAGGAACCTGCCATCCT...CAGCCTGGCCATCCCCAGAGGTGACCCAATGCTCCTGGAGGGGGCAAGCCTGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR GCA 90 bp | AGGAGCCAAGTGCTGTCTATACAGGCTTGCCCCCTCCAGGAGCATTGGGTCACCGCCTCCTGCTGCAGGTaGCCAATGTGGGAGGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: RSQVLSIQACPLQEHWVTASCCR*PMWEAA Trigger: AGCCGCCTCCCACATTGGGCACCTGCAGCAGGAGGC...GGTGACCCAATGCTCCTGGAGGGGGCAAGCCTGTATAGACAGCACTTGGCTCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR CCA 90 bp | TATACAGGCTTGCCCCCTCCAGGAGCATTGGGTCACCTCTGGGGATGGCCAGGCGAAGTGCGTAGAGAATaGCGGGGCGGCTTGCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: YTGLPPPGALGHLWGWPGEVRRE*RGGLQL Trigger: GAGCTGCAAGCCGCCCCGCCATTCTCTACGCACTTC...GCCTGGCCATCCCCAGAGGTGACCCAATGCTCCTGGAGGGGGCAAGCCTGTATA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR CCA 90 bp | ATACAGGCTTGCCCCCTCCAGGAGCATTGGGTCACCTCTGGGGATGGCCAGGCTTTGGCCCAGAGGCTGTaGGGACCACCAAAAGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: IQACPLQEHWVTSGDGQALAQRL*GPPKAS Trigger: GGAGGCTTTTGGTGGTCCCCACAGCCTCTGGGCCAA...AGCCTGGCCATCCCCAGAGGTGACCCAATGCTCCTGGAGGGGGCAAGCCTGTAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR CCA 90 bp | ATACAGGCTTGCCCCCTCCAGGAGCATTGGGTCACCTCTGGGGATGGCCAGGCTAAGGGACAGGAGTCTTaGCCCAGAGGCTGTGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: IQACPLQEHWVTSGDGQAKGQES*PRGCGD Trigger: GTCCCCACAGCCTCTGGGCCAAGACTCCTGTCCCTT...AGCCTGGCCATCCCCAGAGGTGACCCAATGCTCCTGGAGGGGGCAAGCCTGTAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR TCA 90 bp | TGTCTATACAGGCTTGCCCCCTCCAGGAGCATTGGGTCACCTCTGGGGATGGCCGACTCCAGACAGCATTaGAGCCACTGCACCGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: CLYRLAPSRSIGSPLGMADSRQH*SHCTAA Trigger: GGCTGCGGTGCAGTGGCTTCAATGCTGTCTGGAGTC...GGCCATCCCCAGAGGTGACCCAATGCTCCTGGAGGGGGCAAGCCTGTATAGACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR TCA 90 bp | TACAGGCTTGCCCCCTCCAGGAGCATTGGGTCACCTCTGGGGATGGCCAGGCTGCTGGCACATCGGGGTTaGAGAGGATGGTCCCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: YRLAPSRSIGSPLGMARLLAHRG*RGWSLS Trigger: TGAAAGGGACCATCCTCTTCAACCCCGATGTGCCAG...CAGCCTGGCCATCCCCAGAGGTGACCCAATGCTCCTGGAGGGGGCAAGCCTGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR TCA 90 bp | GTGCTGTCTATACAGGCTTGCCCCCTCCAGGAGCATTGGGTCACCTCTGGGGATTCACACAGCACCCAGTaGGCCTCCTGCTGCAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: VLSIQACPLQEHWVTSGDSHSTQ*ASCCRC Trigger: GCACCTGCAGCAGGAGGCTCACTGGGTGCTGTGTGA...ATCCCCAGAGGTGACCCAATGCTCCTGGAGGGGGCAAGCCTGTATAGACAGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR GCA 90 bp | GTGCTGTCTATACAGGCTTGCCCCCTCCAGGAGCATTGGGTCACCTCTGGGGATTGGACGGGCCGGTGCTaGCTACATAGGCAGCGGCTA | + |
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Preference number: 4 (lower is better) Translates to: VLSIQACPLQEHWVTSGDWTGRC*LHRQRL Trigger: TAGCCGCTGCCTATGTAGGCAGCACCGGCCCGTCCA...ATCCCCAGAGGTGACCCAATGCTCCTGGAGGGGGCAAGCCTGTATAGACAGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR GCA 90 bp | TACAGGCTTGCCCCCTCCAGGAGCATTGGGTCACCTCTGGGGATGGCCAGGCTGCTGTCTATACAGGCTTaGCCCCTCCAGGAGCATTGG | + |
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Preference number: 4 (lower is better) Translates to: YRLAPSRSIGSPLGMARLLSIQA*PLQEHW Trigger: CCAATGCTCCTGGAGGGGGCAAGCCTGTATAGACAG...CAGCCTGGCCATCCCCAGAGGTGACCCAATGCTCCTGGAGGGGGCAAGCCTGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR CCA 90 bp | ACAGGAGTCTTGGCCCAGAGGCTGTGGGGACCACCAAAAGCCTCCCAGGCAGCTAGGCCCCTGGTTGGCTaGTGCTCATGGTTAGGGATC | + |
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Preference number: 4 (lower is better) Translates to: TGVLAQRLWGPPKASQAARPLVG*CSWLGI Trigger: GATCCCTAACCATGAGCACCAGCCAACCAGGGGCCT...AGCTGCCTGGGAGGCTTTTGGTGGTCCCCACAGCCTCTGGGCCAAGACTCCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR CCA 90 bp | AGGAGTCTTGGCCCAGAGGCTGTGGGGACCACCAAAAGCCTCCCAGGCAGCTGGGGAAGGCCACTGTCTTaGCCAGAACATCCAAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: RSLGPEAVGTTKSLPGSWGRPLS*PEHPRP Trigger: AGGCCTTGGATGTTCTGGCCAAGACAGTGGCCTTCC...CCAGCTGCCTGGGAGGCTTTTGGTGGTCCCCACAGCCTCTGGGCCAAGACTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR CCA 90 bp | CCTCCCAGGCAGCTGGAACACTGTGTCCAAACCAAGGAAGTCCAATGTGGGGTGGGGCTGGGGTCTGTCTaGCAGTTGGCCACTGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: PPRQLEHCVQTKEVQCGVGLGSV*QLATAS Trigger: GGAGGCAGTGGCCAACTGCCAGACAGACCCCAGCCC...CACCCCACATTGGACTTCCTTGGTTTGGACACAGTGTTCCAGCTGCCTGGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR TCA 90 bp | TATACAGGCTTGCCCCCTCCAGGAGCATTGGGTCACCTCTGGGGATGGCCAGGCTGGGGTGTGGCTGAGTaGAGAGCTGTTCCTAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: YTGLPPPGALGHLWGWPGWGVAE*RAVPKE Trigger: CTCCTTAGGAACAGCTCTTCACTCAGCCACACCCCA...GCCTGGCCATCCCCAGAGGTGACCCAATGCTCCTGGAGGGGGCAAGCCTGTATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR GCA 90 bp | TGTCTATACAGGCTTGCCCCCTCCAGGAGCATTGGGTCACCTCTGGGGATGGCCCCCCTGGTTGGCTGGTaGTCATGGTTAGGGATCTGC | + |
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Preference number: 4 (lower is better) Translates to: CLYRLAPSRSIGSPLGMAPLVGW*SWLGIC Trigger: GCAGATCCCTAACCATGAGCACCAGCCAACCAGGGG...GGCCATCCCCAGAGGTGACCCAATGCTCCTGGAGGGGGCAAGCCTGTATAGACA 60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR CCA 90 bp | CCTCCCAGGCAGCTGGAACACTGTGTCCAAACCAAGGAAGTCCAATGTGGGGTGTGCAGGTGCCCAATGTaGGAGGCGGCTTGGAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: PPRQLEHCVQTKEVQCGVCRCPM*EAAWRP Trigger: AGGCCTCCAAGCCGCCTCCCACATTGGGCACCTGCA...CACCCCACATTGGACTTCCTTGGTTTGGACACAGTGTTCCAGCTGCCTGGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR CCA 90 bp | TGTCTATACAGGCTTGCCCCCTCCAGGAGCATTGGGTCACCTCTGGGGATGGCCCACCTGATCTCTGCCTaGGCTGGAACAGGTCACCTG | + |
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Preference number: 4 (lower is better) Translates to: CLYRLAPSRSIGSPLGMAHLISA*AGTGHL Trigger: CAGGTGACCTGTTCCAGCCCAGGCAGAGATCAGGTG...GGCCATCCCCAGAGGTGACCCAATGCTCCTGGAGGGGGCAAGCCTGTATAGACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR TCA 90 bp | TATACAGGCTTGCCCCCTCCAGGAGCATTGGGTCACCTCTGGGGATGGCCAGGCCTGGAACAGGTCACCTaGGCAAAAGCATGTCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: YTGLPPPGALGHLWGWPGLEQVT*AKACPQ Trigger: TTGGGGACATGCTTTTGCTCAGGTGACCTGTTCCAG...GCCTGGCCATCCCCAGAGGTGACCCAATGCTCCTGGAGGGGGCAAGCCTGTATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR CCA 90 bp | ATACAGGCTTGCCCCCTCCAGGAGCATTGGGTCACCTCTGGGGATGGCCAGGCTAAGGTCACAGCATCTTaGGCCAACCCAAGCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: IQACPLQEHWVTSGDGQAKVTAS*ANPSRK Trigger: CTTCCTGCTTGGGTTGGCCCAAGATGCTGTGACCTT...AGCCTGGCCATCCCCAGAGGTGACCCAATGCTCCTGGAGGGGGCAAGCCTGTAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR TCA 90 bp | CCTCCCAGGCAGCTGGAACACTGTGTCCAAACCAAGGAAGTCCAATGTGGGGTGCCAGCAGAATCTTCTTaGGTATGCTGGGCACCGGGG | + |
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Preference number: 4 (lower is better) Translates to: PPRQLEHCVQTKEVQCGVPAESS*VCWAPG Trigger: CCCCGGTGCCCAGCATACTCAAGAAGATTCTGCTGG...CACCCCACATTGGACTTCCTTGGTTTGGACACAGTGTTCCAGCTGCCTGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR GCA 90 bp | TGTGTCCAAACCAAGGAAGTCCAATGTGGGGTGTGGCTGAGTGAAGAGCTGTTCGGCCACTGCCTCCACTaGTGCTGGGCTCCTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: CVQTKEVQCGVWLSEELFGHCLH*CWAPPA Trigger: TGCTGGAGGAGCCCAGCAGCAGTGGAGGCAGTGGCC...GAACAGCTCTTCACTCAGCCACACCCCACATTGGACTTCCTTGGTTTGGACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| 3UTR CAA 72 bp | GCTGTTCCTAAGGAGCCAAGTGCTGTCTATACAGGCTaGCCCCCTCCAGGAGCATTGGGTCACCTCTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: AVPKEPSAVYTG*PPPGALGHLWG Trigger: TCCCCAGAGGTGACCCAATGCTCCTGGAGGGGGCAAGCCTGTATAGACAGCACTTGGCTCCTTAGGAACAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR CCA 90 bp | GTGCTGTCTATACAGGCTTGCCCCCTCCAGGAGCATTGGGTCACCTCTGGGGATGTTGGCTGGTGCTCATaGTTAGGGATCTGCTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: VLSIQACPLQEHWVTSGDVGWCS*LGICSH Trigger: GTGAGAGCAGATCCCTAACCATGAGCACCAGCCAAC...ATCCCCAGAGGTGACCCAATGCTCCTGGAGGGGGCAAGCCTGTATAGACAGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR CCA 90 bp | TGTGTCCAAACCAAGGAAGTCCAATGTGGGGTGTGGCTGAGTGAAGAGCTGTTCGTCCAATGTGGGGTGTaGCTGAGTGAAGAGCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: CVQTKEVQCGVWLSEELFVQCGV*LSEELF Trigger: GAACAGCTCTTCACTCAGCCACACCCCACATTGGAC...GAACAGCTCTTCACTCAGCCACACCCCACATTGGACTTCCTTGGTTTGGACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR GCA 90 bp | CTGTATAAAGTCGATAGGACTTCTGGTCCAATAAGCAGCCTAAGCTTTCATTCTAATGGCGGGGCGGCTTaGAGCTCCCTGGCATGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LYKVDRTSGPISSLSFHSNGGAA*SSLAWA Trigger: TGCCCATGCCAGGGAGCTGCAAGCCGCCCCGCCATT...AGAATGAAAGCTTAGGCTGCTTATTGGACCAGAAGTCCTATCGACTTTATACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR GCA 90 bp | CTGTATAAAGTCGATAGGACTTCTGGTCCAATAAGCAGCCTAAGCTTTCATTCTAGCTGGACGGGCCGGTaGTGCCTACATAGGCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: LYKVDRTSGPISSLSFHSSWTGR*CLHRQR Trigger: CCGCTGCCTATGTAGGCAGCACCGGCCCGTCCAGCT...AGAATGAAAGCTTAGGCTGCTTATTGGACCAGAAGTCCTATCGACTTTATACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR GCA 90 bp | CTTAATTCAGTTCTGTATAAAGTCGATAGGACTTCTGGTCCAATAAGCAGCCTACAGGCGGCCTTGGGCTaGTGGGCACCAGGGTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: LNSVLYKVDRTSGPISSLQAALG*WAPGFQ Trigger: CTGGAACCCTGGTGCCCAGCAGCCCAAGGCCGCCTG...TAGGCTGCTTATTGGACCAGAAGTCCTATCGACTTTATACAGAACTGAATTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR GCA 90 bp | AAAGTCGATAGGACTTCTGGTCCAATAAGCAGCCTAAGCTTTCATTCTCATCCCAGCACTGCCAGCCTCTaGCCACCTGATCTCTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: KVDRTSGPISSLSFHSHPSTASL*PPDLCL Trigger: CAGGCAGAGATCAGGTGGGCAGAGGCTGGCAGTGCT...GGGATGAGAATGAAAGCTTAGGCTGCTTATTGGACCAGAAGTCCTATCGACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR CCA 90 bp | TCAGTTCTGTATAAAGTCGATAGGACTTCTGGTCCAATAAGCAGCCTAAGCTTTGGGCAGGCCCCTGGTTaGCTGGTGCTCATGGTTAGG | + |
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Preference number: 4 (lower is better) Translates to: SVLYKVDRTSGPISSLSFGQAPG*LVLMVR Trigger: CCTAACCATGAGCACCAGCCAACCAGGGGCCTGCCC...AAAGCTTAGGCTGCTTATTGGACCAGAAGTCCTATCGACTTTATACAGAACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR GCA 90 bp | CTGTATAAAGTCGATAGGACTTCTGGTCCAATAAGCAGCCTAAGCTTTCATTCTGCTGGAGCTCAGAAGTaGGTAGAGAATGGCGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: LYKVDRTSGPISSLSFHSAGAQK*VENGGA Trigger: CGCCCCGCCATTCTCTACGCACTTCTGAGCTCCAGC...AGAATGAAAGCTTAGGCTGCTTATTGGACCAGAAGTCCTATCGACTTTATACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR CCA 90 bp | CTGTATAAAGTCGATAGGACTTCTGGTCCAATAAGCAGCCTAAGCTTTCATTCTGGTCTGTCTGGCAGTTaGCCACTGCCTCCACTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LYKVDRTSGPISSLSFHSGLSGS*PLPPLL Trigger: CAGCAGTGGAGGCAGTGGCCAACTGCCAGACAGACC...AGAATGAAAGCTTAGGCTGCTTATTGGACCAGAAGTCCTATCGACTTTATACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR GCA 90 bp | TCTGGTCCAATAAGCAGCCTAAGCTTTCATTCTCATCCCAAGAAGGGACAGGAGTCATGGTTAGGGATCTaGTCTCACTTCCAGCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: SGPISSLSFHSHPKKGQESWLGI*SHFQLS Trigger: AGAGAGCTGGAAGTGAGAGCAGATCCCTAACCATGA...CTCCTGTCCCTTCTTGGGATGAGAATGAAAGCTTAGGCTGCTTATTGGACCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS TCA 90 bp | GCCGCTGGTCCTGGGGAGGCAGCTGCCAGAAGGATGGCAGGTTCCTaGGGAAGGCCACTGTCTTGGCCAGAACATCCAAGGCCTCCCGGC | + |
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Preference number: 5 (lower is better) Translates to: AAGPGEAAARRMAGS*GRPLSWPEHPRPPG Trigger: GCCGGGAGGCCTTGGATGTTCTGGCCAAGACAGTGGCCTTCCTCAGGAACCTGCCATCCTTCTGGCAGCTGCCTCCCCAGGACCAGCGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS TCA 90 bp | TGGGCTGCTGGGCACCAGGGTTCCAGGACTTCACACAGCACCCAGTaGGCCTCCTGCTGCAGGTGCCCAATGTGGGAGGCGGCTTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: WAAGHQGSRTSHSTQ*ASCCRCPMWEAAWR Trigger: CCTCCAAGCCGCCTCCCACATTGGGCACCTGCAGCAGGAGGCTCACTGGGTGCTGTGTGAAGTCCTGGAACCCTGGTGCCCAGCAGCCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS CCA 90 bp | CGGGGCGGCTTGCAGCTCCCTGGCATGGGCAGGCCCCTGGTTGGCTaGTGCTCATGGTTAGGGATCTGCTCTCACTTCCAGCTCTCTGGC | + |
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Preference number: 5 (lower is better) Translates to: RGGLQLPGMGRPLVG*CSWLGICSHFQLSG Trigger: GCCAGAGAGCTGGAAGTGAGAGCAGATCCCTAACCATGAGCACCAGCCAACCAGGGGCCTGCCCATGCCAGGGAGCTGCAAGCCGCCCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR CAA 90 bp | TACAGGCTTGCCCCCTCCAGGAGCATTGGGTCACCTCTGGGGATGGCCAGGCTGGGTCGGGGGACAGCCTaGAGGCTGGAGCTCAGAAGT | + |
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Preference number: 5 (lower is better) Translates to: YRLAPSRSIGSPLGMARLGRGTA*RLELRS Trigger: ACTTCTGAGCTCCAGCCTCAAGGCTGTCCCCCGACC...CAGCCTGGCCATCCCCAGAGGTGACCCAATGCTCCTGGAGGGGGCAAGCCTGTA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS TCA 90 bp | GCCACTGTCTTGGCCAGAACATCCAAGGCCTCCCGGCAGGTGCGATaGGGTGCACATAGCTGGACGGGCCGGTGCTGCCTACATAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: ATVLARTSKASRQVR*GAHSWTGRCCLHRQ Trigger: CTGCCTATGTAGGCAGCACCGGCCCGTCCAGCTATGTGCACCTCATCGCACCTGCCGGGAGGCCTTGGATGTTCTGGCCAAGACAGTGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS GCA 90 bp | GGAAGGCCACTGTCTTGGCCAGAACATCCAAGGCCTCCCGGCAGGTaGGATGAGGTGCACATAGCTGGACGGGCCGGTGCTGCCTACATA | + |
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Preference number: 5 (lower is better) Translates to: GRPLSWPEHPRPPGR*DEVHIAGRAGAAYI Trigger: TATGTAGGCAGCACCGGCCCGTCCAGCTATGTGCACCTCATCGCACCTGCCGGGAGGCCTTGGATGTTCTGGCCAAGACAGTGGCCTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR CAA 90 bp | CAGGCTTGCCCCCTCCAGGAGCATTGGGTCACCTCTGGGGATGGCCAGGCTGAAGCTGTCTATACAGGCTaGCCCCCTCCAGGAGCATTG | + |
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Preference number: 5 (lower is better) Translates to: QACPLQEHWVTSGDGQAEAVYTG*PPPGAL Trigger: CAATGCTCCTGGAGGGGGCAAGCCTGTATAGACAGC...TTCAGCCTGGCCATCCCCAGAGGTGACCCAATGCTCCTGGAGGGGGCAAGCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR CAA 90 bp | ATACAGGCTTGCCCCCTCCAGGAGCATTGGGTCACCTCTGGGGATGGCCAGGCTAGGAAGGCCACTGTCTaGGCCAGAACATCCAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: IQACPLQEHWVTSGDGQARKATV*ARTSKA Trigger: GGCCTTGGATGTTCTGGCCAAGACAGTGGCCTTCCT...AGCCTGGCCATCCCCAGAGGTGACCCAATGCTCCTGGAGGGGGCAAGCCTGTAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR CAA 90 bp | AGGCTTGCCCCCTCCAGGAGCATTGGGTCACCTCTGGGGATGGCCAGGCTGAATAGGCAGGCATATTCCTaGGGGCTAAGCTCCAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: RLAPSRSIGSPLGMARLNRQAYS*GLSSRL Trigger: GAGCCTGGAGCTTAGCCCCAAGGAATATGCCTGCCT...ATTCAGCCTGGCCATCCCCAGAGGTGACCCAATGCTCCTGGAGGGGGCAAGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR CAA 90 bp | GGACAGGAGTCTTGGCCCAGAGGCTGTGGGGACCACCAAAAGCCTCCCAGGCAGAAAGGTCACAGCATCTaGGGCCAACCCAAGCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: GQESWPRGCGDHQKPPRQKGHSI*GQPKQE Trigger: TTCCTGCTTGGGTTGGCCCAAGATGCTGTGACCTTT...CTGCCTGGGAGGCTTTTGGTGGTCCCCACAGCCTCTGGGCCAAGACTCCTGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR CAA 90 bp | AAGTGCTGTCTATACAGGCTTGCCCCCTCCAGGAGCATTGGGTCACCTCTGGGGGGACTCCAGACAGCATaGAAGCCACTGCACCGCAGC | + |
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Preference number: 5 (lower is better) Translates to: KCCLYRLAPSRSIGSPLGGLQTA*KPLHRS Trigger: GCTGCGGTGCAGTGGCTTCAATGCTGTCTGGAGTCC...CCCCAGAGGTGACCCAATGCTCCTGGAGGGGGCAAGCCTGTATAGACAGCACTT 60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR CAA 90 bp | GTGCTGTCTATACAGGCTTGCCCCCTCCAGGAGCATTGGGTCACCTCTGGGGATTCCAGCAGAATCTTCTaGAGTATGCTGGGCACCGGG | + |
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Preference number: 5 (lower is better) Translates to: VLSIQACPLQEHWVTSGDSSRIF*SMLGTG Trigger: CCCGGTGCCCAGCATACTCAAGAAGATTCTGCTGGA...ATCCCCAGAGGTGACCCAATGCTCCTGGAGGGGGCAAGCCTGTATAGACAGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS-3UTR CAA 90 bp | AAAGTCGATAGGACTTCTGGTCCAATAAGCAGCCTAAGCTTTCATTCTCATCCCGGGTCTGTCTGGCAGTaGGCCACTGCCTCCACTGCT | + |
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Preference number: 5 (lower is better) Translates to: KVDRTSGPISSLSFHSHPGSVWQ*ATASTA Trigger: AGCAGTGGAGGCAGTGGCCAACTGCCAGACAGACCC...GGGATGAGAATGAAAGCTTAGGCTGCTTATTGGACCAGAAGTCCTATCGACTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS TCA 72 bp | TTGGCCAGAACATCCAAGGCCTCCCGGCAGGTGCGATaGGGTGCACATAGCTGGACGGGCCGGTGCTGCCTA | + |
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Preference number: 6 (lower is better) Translates to: LARTSKASRQVR*GAHSWTGRCCL Trigger: TAGGCAGCACCGGCCCGTCCAGCTATGTGCACCTCATCGCACCTGCCGGGAGGCCTTGGATGTTCTGGCCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS GCA 72 bp | CTGTCTTGGCCAGAACATCCAAGGCCTCCCGGCAGGTaGGATGAGGTGCACATAGCTGGACGGGCCGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: LSWPEHPRPPGR*DEVHIAGRAGA Trigger: AGCACCGGCCCGTCCAGCTATGTGCACCTCATCGCACCTGCCGGGAGGCCTTGGATGTTCTGGCCAAGACAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS CAA 72 bp | AGCCTCCTGCTGCAGGTGCCCAATGTGGGAGGCGGCTaGGAGGCCTGGCACATCGGGGTTGAAGAGGATGGT | + |
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Preference number: 6 (lower is better) Translates to: SLLLQVPNVGGG*EAWHIGVEEDG Trigger: ACCATCCTCTTCAACCCCGATGTGCCAGGCCTCCAAGCCGCCTCCCACATTGGGCACCTGCAGCAGGAGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS GCA 72 bp | CAGCTCCCTGGCATGGGCAGGCCCCTGGTTGGCTGGTaGTCATGGTTAGGGATCTGCTCTCACTTCCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: QLPGMGRPLVGW*SWLGICSHFQL Trigger: GAGCTGGAAGTGAGAGCAGATCCCTAACCATGAGCACCAGCCAACCAGGGGCCTGCCCATGCCAGGGAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS CCA 72 bp | CCTGGCATGGGCAGGCCCCTGGTTGGCTGGTGCTCATaGTTAGGGATCTGCTCTCACTTCCAGCTCTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: PGMGRPLVGWCS*LGICSHFQLSG Trigger: GCCAGAGAGCTGGAAGTGAGAGCAGATCCCTAACCATGAGCACCAGCCAACCAGGGGCCTGCCCATGCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS CAA 72 bp | CCTCCACTGCTGCTGGGCTCCTCCAGCAGAATCTTCTaGAGTATGCTGGGCACCGGGGCCTCAGCCACCTCA | + |
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Preference number: 6 (lower is better) Translates to: PPLLLGSSSRIF*SMLGTGASATS Trigger: TGAGGTGGCTGAGGCCCCGGTGCCCAGCATACTCAAGAAGATTCTGCTGGAGGAGCCCAGCAGCAGTGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS TCA 72 bp | CCTGGGGAGGCAGCTGCCAGAAGGATGGCAGGTTCCTaGGGAAGGCCACTGTCTTGGCCAGAACATCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: PGEAAARRMAGS*GRPLSWPEHPR Trigger: CCTTGGATGTTCTGGCCAAGACAGTGGCCTTCCTCAGGAACCTGCCATCCTTCTGGCAGCTGCCTCCCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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| CDS CCA 72 bp | TTGCAGCTCCCTGGCATGGGCAGGCCCCTGGTTGGCTaGTGCTCATGGTTAGGGATCTGCTCTCACTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: LQLPGMGRPLVG*CSWLGICSHFQ Trigger: CTGGAAGTGAGAGCAGATCCCTAACCATGAGCACCAGCCAACCAGGGGCCTGCCCATGCCAGGGAGCTGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254227.4 |
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