RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NQO2 (Homo sapiens)

Ensembl gene IDs: ENSG00000124588

Ensembl transcript IDs: ENST00000338130.7, ENST00000380430.6, ENST00000380441.5, ENST00000380454.8, ENST00000380455.11, ENST00000380472.7, ENST00000397717.7, ENST00000426637.5, ENST00000606474.1

Found 193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp GTTGTAATTTTATTTCATGACAGCACCATCTTCTCTTTGCCTGCGCCTGGGCCTAGTGTGCTGCTTACGTaGTGCCCACGTGCCACAGAG +
Preference number: 2 (lower is better)
Translates to: VVILFHDSTIFSLPAPGPSVLLT*CPRATE
Trigger: CTCTGTGGCACGTGGGCATCACGTAAGCAGCACACT...AGGCCCAGGCGCAGGCAAAGAGAAGATGGTGCTGTCATGAAATAAAATTACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
3UTR-3UTR TCA 90 bp AGTGATATCTTTGTCTGTGGCCCTCGGCTCAAGGTTCATGGCATACAAATCAGATCTTCAAGGATCCGTTaGAAGACTTGGGTTCCTGGT +
Preference number: 2 (lower is better)
Translates to: SDIFVCGPRLKVHGIQIRSSRIR*KTWVPG
Trigger: ACCAGGAACCCAAGTCTTTCAACGGATCCTTGAAGA...TCTGATTTGTATGCCATGAACCTTGAGCCGAGGGCCACAGACAAAGATATCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606474.1
3UTR-3UTR TCA 90 bp GTGATATCTTTGTCTGTGGCCCTCGGCTCAAGGTTCATGGCATACAAATCAGACGGTGTGCATAGACAATaGGTACTTTCTTACCCAAGA +
Preference number: 2 (lower is better)
Translates to: VISLSVALGSRFMAYKSDGVHRQ*VLSYPR
Trigger: TCTTGGGTAAGAAAGTACTCATTGTCTATGCACACC...GTCTGATTTGTATGCCATGAACCTTGAGCCGAGGGCCACAGACAAAGATATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606474.1
3UTR-3UTR CAA 90 bp GTGATATCTTTGTCTGTGGCCCTCGGCTCAAGGTTCATGGCATACAAATCAGACTTCTTCAAGGATCCGTaGAAAGACTTGGGTTCCTGG +
Preference number: 3 (lower is better)
Translates to: VISLSVALGSRFMAYKSDFFKDP*KDLGSW
Trigger: CCAGGAACCCAAGTCTTTCAACGGATCCTTGAAGAA...GTCTGATTTGTATGCCATGAACCTTGAGCCGAGGGCCACAGACAAAGATATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606474.1
CDS-3UTR TCA 90 bp TGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCACAGGGACCGCGCACTCGCTaGCGCCTGGAGGGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: CLRLGLLVCCLRDAHVPQGPRTR*RLEGGS
Trigger: GCTCCCGCCCTCCAGGCGTCAGCGAGTGCGCGGTCC...CTGTGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380455.11
CDS-3UTR CCA 90 bp TGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCACAGGCACTCGCTGACGCCTaGAGGGCGGGAGCGCTGCGA +
Preference number: 4 (lower is better)
Translates to: CLRLGLLVCCLRDAHVPQALADA*RAGALR
Trigger: TCGCAGCGCTCCCGCCCTCCAGGCGTCAGCGAGTGC...CTGTGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380455.11
CDS-3UTR CCA 90 bp TGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCACAGTGCCCGAAGTGCCAGTaGGCTGTGCAGGGGATGGGC +
Preference number: 4 (lower is better)
Translates to: CLRLGLLVCCLRDAHVPQCPKCQ*AVQGMG
Trigger: GCCCATCCCCTGCACAGCCCACTGGCACTTCGGGCA...CTGTGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CCA 90 bp TCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCGGGACCCTGCGTGTaGGCGCGTTCCGTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: SLCLRLGLLVCCLRDAHVPGPCV*ARSVRA
Trigger: GGCTCTCACGGAACGCGCCCACACGCAGGGTCCCGG...CACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380430.6
CDS-3UTR GCA 90 bp CTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCAGACCGCTCTAGGAGTTaGGCCAGGTTCCGGCCGCAC +
Preference number: 4 (lower is better)
Translates to: LCLRLGLLVCCLRDAHVPDRSRS*ARFRPH
Trigger: GTGCGGCCGGAACCTGGCGCAACTCCTAGAGCGGTC...TGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338130.7
ENST00000380441.5
ENST00000380455.11
CDS-3UTR CCA 90 bp TGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCACAGCGGCCGTGCCTCCCGTaGTTACGGAAAGGAGCGCTA +
Preference number: 4 (lower is better)
Translates to: CLRLGLLVCCLRDAHVPQRPCLP*LRKGAL
Trigger: TAGCGCTCCTTTCCGTAACCACGGGAGGCACGGCCG...CTGTGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CCA 90 bp CTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCATGCCCGAAGTGCCAGTaGGCTGTGCAGGGGATGGGC +
Preference number: 4 (lower is better)
Translates to: LCLRLGLLVCCLRDAHVPCPKCQ*AVQGMG
Trigger: GCCCATCCCCTGCACAGCCCACTGGCACTTCGGGCA...TGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CCA 90 bp TCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGAGGTTCCGGCCGCACTaGACCGCGCACTCGCTGACG +
Preference number: 4 (lower is better)
Translates to: SLCLRLGLLVCCLRDAHVRFRPH*TAHSLT
Trigger: CGTCAGCGAGTGCGCGGTCCAGTGCGGCCGGAACCT...CACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380455.11
CDS-3UTR CCA 90 bp CTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCAGTACAGAATGGTCCCTaGCCCGGGCGCGACGACCCA +
Preference number: 4 (lower is better)
Translates to: LCLRLGLLVCCLRDAHVPVQNGP*PGRDDP
Trigger: TGGGTCGTCGCGCCCGGGCCAGGGACCATTCTGTAC...TGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380430.6
CDS-3UTR TCA 90 bp TGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCACAGGGATGGCTGGCACGCTaGACCAGTACAGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: CLRLGLLVCCLRDAHVPQGWLAR*TSTAGT
Trigger: AGTTCCCGCTGTACTGGTTCAGCGTGCCAGCCATCC...CTGTGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380455.11
CDS-3UTR GCA 90 bp TCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGGACCGCTCTAGGAGTTaGGCCAGGTTCCGGCCGCAC +
Preference number: 4 (lower is better)
Translates to: SLCLRLGLLVCCLRDAHVDRSRS*ARFRPH
Trigger: GTGCGGCCGGAACCTGGCGCAACTCCTAGAGCGGTC...CACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338130.7
ENST00000380441.5
ENST00000380455.11
CDS-3UTR GCA 90 bp TCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGGGGACCACGGACCGGTaGCAACCTAAGCAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: SLCLRLGLLVCCLRDAHVGTTDR*QPKQPG
Trigger: TCCGGGCTGCTTAGGTTGGCACCGGTCCGTGGTCCC...CACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380455.11
CDS-3UTR GCA 90 bp TCTTCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACTCGACACCGGGACCCTaGGTGTGGGCGCGTTCCGTG +
Preference number: 4 (lower is better)
Translates to: SSLCLRLGLLVCCLRDAHSTPGP*VWARSV
Trigger: CACGGAACGCGCCCACACGCAGGGTCCCGGTGTCGA...GTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380430.6
CDS-3UTR CCA 90 bp TGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCACAGGGGCTGTGCAGGGGATaGGCTCTTCCTTCCAGATGG +
Preference number: 4 (lower is better)
Translates to: CLRLGLLVCCLRDAHVPQGLCRG*ALPSRW
Trigger: CCATCTGGAAGGAAGAGCCCATCCCCTGCACAGCCC...CTGTGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR TCA 90 bp CTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCAGGATGGCTGGCACGCTaGACCAGTACAGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: LCLRLGLLVCCLRDAHVPGWLAR*TSTAGT
Trigger: AGTTCCCGCTGTACTGGTTCAGCGTGCCAGCCATCC...TGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380455.11
CDS-3UTR GCA 90 bp TCTTCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGACCGCTCTAGGAGTTaGGCCAGGTTCCGGCCGCAC +
Preference number: 4 (lower is better)
Translates to: SSLCLRLGLLVCCLRDAHDRSRS*ARFRPH
Trigger: GTGCGGCCGGAACCTGGCGCAACTCCTAGAGCGGTC...GTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338130.7
ENST00000380441.5
ENST00000380455.11
CDS-3UTR GCA 90 bp TGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCACAGTCCTTCCAGATGGTCTaGAGCCTCTGGGACCACGCA +
Preference number: 4 (lower is better)
Translates to: CLRLGLLVCCLRDAHVPQSFQMV*SLWDHA
Trigger: TGCGTGGTCCCAGAGGCTGCAGACCATCTGGAAGGA...CTGTGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp TGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCACAGAGTTATTGCCCGAAGTaGCAGTGGGCTGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: CLRLGLLVCCLRDAHVPQSYCPK*QWAVQG
Trigger: CCCCTGCACAGCCCACTGGCACTTCGGGCAATAACT...CTGTGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp TGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCACAGCTGGGCCTCCTAGTGTaGTGCTTACGTGATGCCCAC +
Preference number: 4 (lower is better)
Translates to: CLRLGLLVCCLRDAHVPQLGLLV*CLRDAH
Trigger: GTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAG...CTGTGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CCA 90 bp TGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCACAGGCCCTTCAGGATGGCTaGCACGCTGAACCAGTACAG +
Preference number: 4 (lower is better)
Translates to: CLRLGLLVCCLRDAHVPQALQDG*HAEPVQ
Trigger: CTGTACTGGTTCAGCGTGCCAGCCATCCTGAAGGGC...CTGTGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380455.11
CDS-3UTR CCA 90 bp TCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCGGCCGTGCCTCCCGTaGTTACGGAAAGGAGCGCTA +
Preference number: 4 (lower is better)
Translates to: SLCLRLGLLVCCLRDAHVRPCLP*LRKGAL
Trigger: TAGCGCTCCTTTCCGTAACCACGGGAGGCACGGCCG...CACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CCA 90 bp TGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCACAGGCTCTTCCTTCCAGATaGTCTGCAGCCTCTGGGACC +
Preference number: 4 (lower is better)
Translates to: CLRLGLLVCCLRDAHVPQALPSR*SAASGT
Trigger: GGTCCCAGAGGCTGCAGACCATCTGGAAGGAAGAGC...CTGTGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CCA 90 bp CTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCAGGGCTGTGCAGGGGATaGGCTCTTCCTTCCAGATGG +
Preference number: 4 (lower is better)
Translates to: LCLRLGLLVCCLRDAHVPGLCRG*ALPSRW
Trigger: CCATCTGGAAGGAAGAGCCCATCCCCTGCACAGCCC...TGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CCA 90 bp TGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCACAGATCCTATGTACAGAATaGTCCCTGGCCCGGGCGCGA +
Preference number: 4 (lower is better)
Translates to: CLRLGLLVCCLRDAHVPQILCTE*SLARAR
Trigger: TCGCGCCCGGGCCAGGGACCATTCTGTACATAGGAT...CTGTGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380430.6
CDS-3UTR TCA 90 bp TCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGGGATGGCTGGCACGCTaGACCAGTACAGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: SLCLRLGLLVCCLRDAHVGWLAR*TSTAGT
Trigger: AGTTCCCGCTGTACTGGTTCAGCGTGCCAGCCATCC...CACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380455.11
CDS-3UTR TCA 90 bp CTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCAAGTGTGCTGCTTACGTaGTGCCCACGTGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: LCLRLGLLVCCLRDAHVPSVLLT*CPRATE
Trigger: CTCTGTGGCACGTGGGCATCACGTAAGCAGCACACT...TGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp TGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCACAGTGGCTGGGGCTTTCCTaGGTAGTCTCTCTTCAGCGA +
Preference number: 4 (lower is better)
Translates to: CLRLGLLVCCLRDAHVPQWLGLS*VVSLQR
Trigger: TCGCTGAAGAGAGACTACGCAGGAAAGCCCCAGCCA...CTGTGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp TCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGAGTGCCAGTGGGCTGTaGAGGGGATGGGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SLCLRLGLLVCCLRDAHVSASGL*RGWALP
Trigger: AGGAAGAGCCCATCCCCTGCACAGCCCACTGGCACT...CACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp TGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCACAGGTGCCACAGAGTTATTaGCCGAAGTGCCAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: CLRLGLLVCCLRDAHVPQVPQSY*PKCQWA
Trigger: AGCCCACTGGCACTTCGGGCAATAACTCTGTGGCAC...CTGTGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp CTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCAGGCCTCCTAGTGTGCTaGTTACGTGATGCCCACGTG +
Preference number: 4 (lower is better)
Translates to: LCLRLGLLVCCLRDAHVPGLLVC*LRDAHV
Trigger: CACGTGGGCATCACGTAAGCAGCACACTAGGAGGCC...TGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp CTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCACTGGGCCTCCTAGTGTaGTGCTTACGTGATGCCCAC +
Preference number: 4 (lower is better)
Translates to: LCLRLGLLVCCLRDAHVPLGLLV*CLRDAH
Trigger: GTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAG...TGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp CTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCAGCACCATCTTCTCTTTaGCTGCGCCTGGGCCTCCTA +
Preference number: 4 (lower is better)
Translates to: LCLRLGLLVCCLRDAHVPAPSSL*LRLGLL
Trigger: TAGGAGGCCCAGGCGCAGGCAAAGAGAAGATGGTGC...TGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CCA 90 bp CTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCAGCCCTTCAGGATGGCTaGCACGCTGAACCAGTACAG +
Preference number: 4 (lower is better)
Translates to: LCLRLGLLVCCLRDAHVPALQDG*HAEPVQ
Trigger: CTGTACTGGTTCAGCGTGCCAGCCATCCTGAAGGGC...TGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380455.11
CDS-3UTR CCA 90 bp TCTTCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACCGGCCGTGCCTCCCGTaGTTACGGAAAGGAGCGCTA +
Preference number: 4 (lower is better)
Translates to: SSLCLRLGLLVCCLRDAHRPCLP*LRKGAL
Trigger: TAGCGCTCCTTTCCGTAACCACGGGAGGCACGGCCG...GTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CCA 90 bp CTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCAGCTCTTCCTTCCAGATaGTCTGCAGCCTCTGGGACC +
Preference number: 4 (lower is better)
Translates to: LCLRLGLLVCCLRDAHVPALPSR*SAASGT
Trigger: GGTCCCAGAGGCTGCAGACCATCTGGAAGGAAGAGC...TGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR TCA 90 bp TGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCACAGTGGATTCCTTCTCTCTaGTTTGATGGGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: CLRLGLLVCCLRDAHVPQWIPSL*FDGWLG
Trigger: CCCCAGCCACCCATCAAATCAGAGAGAAGGAATCCA...CTGTGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR TCA 90 bp TCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGAGTGTGCTGCTTACGTaGTGCCCACGTGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: SLCLRLGLLVCCLRDAHVSVLLT*CPRATE
Trigger: CTCTGTGGCACGTGGGCATCACGTAAGCAGCACACT...CACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp CTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCATGGCTGGGGCTTTCCTaGGTAGTCTCTCTTCAGCGA +
Preference number: 4 (lower is better)
Translates to: LCLRLGLLVCCLRDAHVPWLGLS*VVSLQR
Trigger: TCGCTGAAGAGAGACTACGCAGGAAAGCCCCAGCCA...TGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp TCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGTCCTTCCAGATGGTCTaGAGCCTCTGGGACCACGCA +
Preference number: 4 (lower is better)
Translates to: SLCLRLGLLVCCLRDAHVSFQMV*SLWDHA
Trigger: TGCGTGGTCCCAGAGGCTGCAGACCATCTGGAAGGA...CACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp TCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGAGTTATTGCCCGAAGTaGCAGTGGGCTGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SLCLRLGLLVCCLRDAHVSYCPK*QWAVQG
Trigger: CCCCTGCACAGCCCACTGGCACTTCGGGCAATAACT...CACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp CTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCAGTGCCACAGAGTTATTaGCCGAAGTGCCAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: LCLRLGLLVCCLRDAHVPVPQSY*PKCQWA
Trigger: AGCCCACTGGCACTTCGGGCAATAACTCTGTGGCAC...TGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp TGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCACAGTACGTGATGCCCACGTaGCACAGAGTTATTGCCCGA +
Preference number: 4 (lower is better)
Translates to: CLRLGLLVCCLRDAHVPQYVMPT*HRVIAR
Trigger: TCGGGCAATAACTCTGTGGCACGTGGGCATCACGTA...CTGTGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp TCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCTGGGCCTCCTAGTGTaGTGCTTACGTGATGCCCAC +
Preference number: 4 (lower is better)
Translates to: SLCLRLGLLVCCLRDAHVLGLLV*CLRDAH
Trigger: GTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAG...CACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp TCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGGCACCATCTTCTCTTTaGCTGCGCCTGGGCCTCCTA +
Preference number: 4 (lower is better)
Translates to: SLCLRLGLLVCCLRDAHVAPSSL*LRLGLL
Trigger: TAGGAGGCCCAGGCGCAGGCAAAGAGAAGATGGTGC...CACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CCA 90 bp TGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCACAGTCCAGCAATCAGGACTaGAATCTTGAGCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: CLRLGLLVCCLRDAHVPQSSNQD*NLEQGL
Trigger: CAGGCCCTGCTCAAGATTCCAGTCCTGATTGCTGGA...CTGTGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338130.7
ENST00000380441.5
CDS-3UTR CCA 90 bp TCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGGCTCTTCCTTCCAGATaGTCTGCAGCCTCTGGGACC +
Preference number: 4 (lower is better)
Translates to: SLCLRLGLLVCCLRDAHVALPSR*SAASGT
Trigger: GGTCCCAGAGGCTGCAGACCATCTGGAAGGAAGAGC...CACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CCA 90 bp TCTTCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGGGCTGTGCAGGGGATaGGCTCTTCCTTCCAGATGG +
Preference number: 4 (lower is better)
Translates to: SSLCLRLGLLVCCLRDAHGLCRG*ALPSRW
Trigger: CCATCTGGAAGGAAGAGCCCATCCCCTGCACAGCCC...GTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR TCA 90 bp TCTTCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACAGTGTGCTGCTTACGTaGTGCCCACGTGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: SSLCLRLGLLVCCLRDAHSVLLT*CPRATE
Trigger: CTCTGTGGCACGTGGGCATCACGTAAGCAGCACACT...GTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp TCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGTGGCTGGGGCTTTCCTaGGTAGTCTCTCTTCAGCGA +
Preference number: 4 (lower is better)
Translates to: SLCLRLGLLVCCLRDAHVWLGLS*VVSLQR
Trigger: TCGCTGAAGAGAGACTACGCAGGAAAGCCCCAGCCA...CACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp TGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCACAGCACAGAAGTGTAATGTaGCATGCTGGAGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: CLRLGLLVCCLRDAHVPQHRSVM*HAGVAT
Trigger: TGTGGCCACTCCAGCATGGCACATTACACTTCTGTG...CTGTGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp TCTTCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACAGTTATTGCCCGAAGTaGCAGTGGGCTGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SSLCLRLGLLVCCLRDAHSYCPK*QWAVQG
Trigger: CCCCTGCACAGCCCACTGGCACTTCGGGCAATAACT...GTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp CTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCATACGTGATGCCCACGTaGCACAGAGTTATTGCCCGA +
Preference number: 4 (lower is better)
Translates to: LCLRLGLLVCCLRDAHVPYVMPT*HRVIAR
Trigger: TCGGGCAATAACTCTGTGGCACGTGGGCATCACGTA...TGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp TCTTCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGGCCTCCTAGTGTGCTaGTTACGTGATGCCCACGTG +
Preference number: 4 (lower is better)
Translates to: SSLCLRLGLLVCCLRDAHGLLVC*LRDAHV
Trigger: CACGTGGGCATCACGTAAGCAGCACACTAGGAGGCC...GTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp TCTTCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGCACCATCTTCTCTTTaGCTGCGCCTGGGCCTCCTA +
Preference number: 4 (lower is better)
Translates to: SSLCLRLGLLVCCLRDAHAPSSL*LRLGLL
Trigger: TAGGAGGCCCAGGCGCAGGCAAAGAGAAGATGGTGC...GTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CCA 90 bp TCTTCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGCCCTTCAGGATGGCTaGCACGCTGAACCAGTACAG +
Preference number: 4 (lower is better)
Translates to: SSLCLRLGLLVCCLRDAHALQDG*HAEPVQ
Trigger: CTGTACTGGTTCAGCGTGCCAGCCATCCTGAAGGGC...GTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380455.11
CDS-3UTR CCA 90 bp CTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCATGTGCCATGCTGGAGTaGCCACAGGAAGTATCGAGA +
Preference number: 4 (lower is better)
Translates to: LCLRLGLLVCCLRDAHVPCAMLE*PQEVSR
Trigger: TCTCGATACTTCCTGTGGCCACTCCAGCATGGCACA...TGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR TCA 90 bp TCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGTGGCATGTGAGTTTGTaGCTTCTGTCTCCATCCCCC +
Preference number: 4 (lower is better)
Translates to: SLCLRLGLLVCCLRDAHVWHVSL*LLSPSP
Trigger: GGGGGATGGAGACAGAAGTCACAAACTCACATGCCA...CACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338130.7
CDS-3UTR TCA 90 bp TCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGTGGATTCCTTCTCTCTaGTTTGATGGGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SLCLRLGLLVCCLRDAHVWIPSL*FDGWLG
Trigger: CCCCAGCCACCCATCAAATCAGAGAGAAGGAATCCA...CACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp TCTTCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCACAGAGTTATTaGCCGAAGTGCCAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: SSLCLRLGLLVCCLRDAHVPQSY*PKCQWA
Trigger: AGCCCACTGGCACTTCGGGCAATAACTCTGTGGCAC...GTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp TCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGTACGTGATGCCCACGTaGCACAGAGTTATTGCCCGA +
Preference number: 4 (lower is better)
Translates to: SLCLRLGLLVCCLRDAHVYVMPT*HRVIAR
Trigger: TCGGGCAATAACTCTGTGGCACGTGGGCATCACGTA...CACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CCA 90 bp TCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGTCAAAGGCAAAGCCCTaGCACAGCACCCTATCCATC +
Preference number: 4 (lower is better)
Translates to: SLCLRLGLLVCCLRDAHVSKAKP*HSTLSI
Trigger: GATGGATAGGGTGCTGTGCCAGGGCTTTGCCTTTGA...CACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380455.11
CDS-3UTR CCA 90 bp TGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCACAGGGAATCGTAGAATCCTaGGATGTCAAAGGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: CLRLGLLVCCLRDAHVPQGIVES*DVKGKA
Trigger: GGCTTTGCCTTTGACATCCCAGGATTCTACGATTCC...CTGTGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380455.11
CDS-3UTR CCA 90 bp TCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGTGTGCCATGCTGGAGTaGCCACAGGAAGTATCGAGA +
Preference number: 4 (lower is better)
Translates to: SLCLRLGLLVCCLRDAHVCAMLE*PQEVSR
Trigger: TCTCGATACTTCCTGTGGCCACTCCAGCATGGCACA...CACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR TCA 90 bp CTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCATCTTCAAGGATCCGTTaGAAGACTTGGGTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: LCLRLGLLVCCLRDAHVPSSRIR*KTWVPG
Trigger: ACCAGGAACCCAAGTCTTTCAACGGATCCTTGAAGA...TGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp TCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGTGTTGCCAGTGTTTCTaGAGACTGGGGGAACACCTT +
Preference number: 4 (lower is better)
Translates to: SLCLRLGLLVCCLRDAHVCCQCF*RLGEHL
Trigger: AAGGTGTTCCCCCAGTCTGCAGAAACACTGGCAACA...CACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338130.7
CDS-3UTR GCA 90 bp TGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCACAGGAGTACTTTCTTACCTaGCATAGCGTAAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: CLRLGLLVCCLRDAHVPQEYFLT*HSVRRW
Trigger: CCACCTTCTTACGCTATGGCAGGTAAGAAAGTACTC...CTGTGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp TGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCACAGTCCCGAACCTTTTTCTaGTCATCAGTGATGTCGCTA +
Preference number: 4 (lower is better)
Translates to: CLRLGLLVCCLRDAHVPQSRTFF*SSVMSL
Trigger: TAGCGACATCACTGATGAGCAGAAAAAGGTTCGGGA...CTGTGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp TCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGAAGTGTAATGTGCCATaGTGGAGTGGCCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: SLCLRLGLLVCCLRDAHVKCNVP*WSGHRK
Trigger: CTTCCTGTGGCCACTCCAGCATGGCACATTACACTT...CACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp TCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCACAGAAGTGTAATGTaGCATGCTGGAGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: SLCLRLGLLVCCLRDAHVHRSVM*HAGVAT
Trigger: TGTGGCCACTCCAGCATGGCACATTACACTTCTGTG...CACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CCA 90 bp TCTTCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACTCAAAGGCAAAGCCCTaGCACAGCACCCTATCCATC +
Preference number: 4 (lower is better)
Translates to: SSLCLRLGLLVCCLRDAHSKAKP*HSTLSI
Trigger: GATGGATAGGGTGCTGTGCCAGGGCTTTGCCTTTGA...GTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380455.11
CDS-3UTR CCA 90 bp CTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCAGGAATCGTAGAATCCTaGGATGTCAAAGGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: LCLRLGLLVCCLRDAHVPGIVES*DVKGKA
Trigger: GGCTTTGCCTTTGACATCCCAGGATTCTACGATTCC...TGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380455.11
CDS-3UTR CCA 90 bp TCTTCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACTGTGCCATGCTGGAGTaGCCACAGGAAGTATCGAGA +
Preference number: 4 (lower is better)
Translates to: SSLCLRLGLLVCCLRDAHCAMLE*PQEVSR
Trigger: TCTCGATACTTCCTGTGGCCACTCCAGCATGGCACA...GTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CCA 90 bp CTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCATGTAATGTGCCATGCTaGAGTGGCCACAGGAAGTAT +
Preference number: 4 (lower is better)
Translates to: LCLRLGLLVCCLRDAHVPCNVPC*SGHRKY
Trigger: ATACTTCCTGTGGCCACTCCAGCATGGCACATTACA...TGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR TCA 90 bp TCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGGGAGCAAAGCTGATCTaGGGGGCAAGGACTTTAAAT +
Preference number: 4 (lower is better)
Translates to: SLCLRLGLLVCCLRDAHVGAKLI*GARTLN
Trigger: ATTTAAAGTCCTTGCCCCTCAGATCAGCTTTGCTCC...CACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp CTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCAGAGTACTTTCTTACCTaGCATAGCGTAAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: LCLRLGLLVCCLRDAHVPEYFLT*HSVRRW
Trigger: CCACCTTCTTACGCTATGGCAGGTAAGAAAGTACTC...TGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR TCA 90 bp TCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGGGTGTGCATAGACAATaGGTACTTTCTTACCTGCCA +
Preference number: 4 (lower is better)
Translates to: SLCLRLGLLVCCLRDAHVGVHRQ*VLSYLP
Trigger: TGGCAGGTAAGAAAGTACTCATTGTCTATGCACACC...CACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR TCA 90 bp TCTTCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACTCTTCAAGGATCCGTTaGAAGACTTGGGTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SSLCLRLGLLVCCLRDAHSSRIR*KTWVPG
Trigger: ACCAGGAACCCAAGTCTTTCAACGGATCCTTGAAGA...GTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR TCA 90 bp TCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGATCGAGAATCTCCATTaGCTCCTGTCTTCGTGTACA +
Preference number: 4 (lower is better)
Translates to: SLCLRLGLLVCCLRDAHVIENLH*LLSSCT
Trigger: TGTACACGAAGACAGGAGTCAATGGAGATTCTCGAT...CACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR TCA 90 bp TCTTCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGGAGCAAAGCTGATCTaGGGGGCAAGGACTTTAAAT +
Preference number: 4 (lower is better)
Translates to: SSLCLRLGLLVCCLRDAHGAKLI*GARTLN
Trigger: ATTTAAAGTCCTTGCCCCTCAGATCAGCTTTGCTCC...GTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp TCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGTCCCGAACCTTTTTCTaGTCATCAGTGATGTCGCTA +
Preference number: 4 (lower is better)
Translates to: SLCLRLGLLVCCLRDAHVSRTFF*SSVMSL
Trigger: TAGCGACATCACTGATGAGCAGAAAAAGGTTCGGGA...CACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CCA 90 bp TGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCACAGCCCTTTTGTATTCCTTaGCCCAGTTTACATGTTTAC +
Preference number: 4 (lower is better)
Translates to: CLRLGLLVCCLRDAHVPQPFCIP*PSLHVY
Trigger: GTAAACATGTAAACTGGGCCAAGGAATACAAAAGGG...CTGTGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338130.7
CDS-3UTR CCA 90 bp TCTTCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGGAATCGTAGAATCCTaGGATGTCAAAGGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: SSLCLRLGLLVCCLRDAHGIVES*DVKGKA
Trigger: GGCTTTGCCTTTGACATCCCAGGATTCTACGATTCC...GTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380455.11
CDS-3UTR CCA 90 bp TCTTCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACTGTAATGTGCCATGCTaGAGTGGCCACAGGAAGTAT +
Preference number: 4 (lower is better)
Translates to: SSLCLRLGLLVCCLRDAHCNVPC*SGHRKY
Trigger: ATACTTCCTGTGGCCACTCCAGCATGGCACATTACA...GTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CCA 90 bp GTTGTAATTTTATTTCATGACAGCACCATCTTCTCTTTGCCTGCGCCTGGGCCTTGCCCGAAGTGCCAGTaGGCTGTGCAGGGGATGGGC +
Preference number: 4 (lower is better)
Translates to: VVILFHDSTIFSLPAPGPCPKCQ*AVQGMG
Trigger: GCCCATCCCCTGCACAGCCCACTGGCACTTCGGGCA...AGGCCCAGGCGCAGGCAAAGAGAAGATGGTGCTGTCATGAAATAAAATTACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR TCA 90 bp TCTTCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGGTGTGCATAGACAATaGGTACTTTCTTACCTGCCA +
Preference number: 4 (lower is better)
Translates to: SSLCLRLGLLVCCLRDAHGVHRQ*VLSYLP
Trigger: TGGCAGGTAAGAAAGTACTCATTGTCTATGCACACC...GTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR TCA 90 bp TCTTCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACATCGAGAATCTCCATTaGCTCCTGTCTTCGTGTACA +
Preference number: 4 (lower is better)
Translates to: SSLCLRLGLLVCCLRDAHIENLH*LLSSCT
Trigger: TGTACACGAAGACAGGAGTCAATGGAGATTCTCGAT...GTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp TCTTCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGAGTACTTTCTTACCTaGCATAGCGTAAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: SSLCLRLGLLVCCLRDAHEYFLT*HSVRRW
Trigger: CCACCTTCTTACGCTATGGCAGGTAAGAAAGTACTC...GTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR TCA 90 bp GTTGTAATTTTATTTCATGACAGCACCATCTTCTCTTTGCCTGCGCCTGGGCCTTGTGGGCGCGTTCCGTaGGAGCCAAGCACGATCCTA +
Preference number: 4 (lower is better)
Translates to: VVILFHDSTIFSLPAPGPCGRVP*EPSTIL
Trigger: TAGGATCGTGCTTGGCTCTCACGGAACGCGCCCACA...AGGCCCAGGCGCAGGCAAAGAGAAGATGGTGCTGTCATGAAATAAAATTACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380430.6
CDS-3UTR GCA 90 bp TCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGGATTCCCAAAGTGATTaGCCGAAATCATGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: SLCLRLGLLVCCLRDAHVDSQSD*PKSCCL
Trigger: CAAACAACATGATTTCGGGCAATCACTTTGGGAATC...CACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338130.7
CDS-3UTR GCA 90 bp TCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGTCTTTCTTCTTCGGATaGAATTTCAGGAGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: SLCLRLGLLVCCLRDAHVSFFFG*NFRSKA
Trigger: AGCTTTGCTCCTGAAATTGCATCCGAAGAAGAAAGA...CACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp GTTGTAATTTTATTTCATGACAGCACCATCTTCTCTTTGCCTGCGCCTGGGCCTAGTGCCAGTGGGCTGTaGAGGGGATGGGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: VVILFHDSTIFSLPAPGPSASGL*RGWALP
Trigger: AGGAAGAGCCCATCCCCTGCACAGCCCACTGGCACT...AGGCCCAGGCGCAGGCAAAGAGAAGATGGTGCTGTCATGAAATAAAATTACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CCA 90 bp GTTGTAATTTTATTTCATGACAGCACCATCTTCTCTTTGCCTGCGCCTGGGCCTGGGCTGTGCAGGGGATaGGCTCTTCCTTCCAGATGG +
Preference number: 4 (lower is better)
Translates to: VVILFHDSTIFSLPAPGPGLCRG*ALPSRW
Trigger: CCATCTGGAAGGAAGAGCCCATCCCCTGCACAGCCC...AGGCCCAGGCGCAGGCAAAGAGAAGATGGTGCTGTCATGAAATAAAATTACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp TCTTCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACTCTTTCTTCTTCGGATaGAATTTCAGGAGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: SSLCLRLGLLVCCLRDAHSFFFG*NFRSKA
Trigger: AGCTTTGCTCCTGAAATTGCATCCGAAGAAGAAAGA...GTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp GTTGTAATTTTATTTCATGACAGCACCATCTTCTCTTTGCCTGCGCCTGGGCCTTCCTTCCAGATGGTCTaGAGCCTCTGGGACCACGCA +
Preference number: 4 (lower is better)
Translates to: VVILFHDSTIFSLPAPGPSFQMV*SLWDHA
Trigger: TGCGTGGTCCCAGAGGCTGCAGACCATCTGGAAGGA...AGGCCCAGGCGCAGGCAAAGAGAAGATGGTGCTGTCATGAAATAAAATTACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp GTTGTAATTTTATTTCATGACAGCACCATCTTCTCTTTGCCTGCGCCTGGGCCTAGTTATTGCCCGAAGTaGCAGTGGGCTGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: VVILFHDSTIFSLPAPGPSYCPK*QWAVQG
Trigger: CCCCTGCACAGCCCACTGGCACTTCGGGCAATAACT...AGGCCCAGGCGCAGGCAAAGAGAAGATGGTGCTGTCATGAAATAAAATTACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CCA 90 bp GTTGTAATTTTATTTCATGACAGCACCATCTTCTCTTTGCCTGCGCCTGGGCCTGCTCTTCCTTCCAGATaGTCTGCAGCCTCTGGGACC +
Preference number: 4 (lower is better)
Translates to: VVILFHDSTIFSLPAPGPALPSR*SAASGT
Trigger: GGTCCCAGAGGCTGCAGACCATCTGGAAGGAAGAGC...AGGCCCAGGCGCAGGCAAAGAGAAGATGGTGCTGTCATGAAATAAAATTACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CCA 90 bp GTGATATCTTTGTCTGTGGCCCTCGGCTCAAGGTTCATGGCATACAAATCAGACGCCTTGCAGTTGAGATaGCCAGTGAGGTGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: VISLSVALGSRFMAYKSDALQLR*PVRCQQ
Trigger: CTGCTGACACCTCACTGGCCATCTCAACTGCAAGGC...GTCTGATTTGTATGCCATGAACCTTGAGCCGAGGGCCACAGACAAAGATATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606474.1
CDS-3UTR GCA 90 bp AGTGATATCTTTGTCTGTGGCCCTCGGCTCAAGGTTCATGGCATACAAATCAGATGGCTGGGGCTTTCCTaGGTAGTCTCTCTTCAGCGA +
Preference number: 4 (lower is better)
Translates to: SDIFVCGPRLKVHGIQIRWLGLS*VVSLQR
Trigger: TCGCTGAAGAGAGACTACGCAGGAAAGCCCCAGCCA...TCTGATTTGTATGCCATGAACCTTGAGCCGAGGGCCACAGACAAAGATATCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606474.1
CDS-3UTR GCA 90 bp GTTGTAATTTTATTTCATGACAGCACCATCTTCTCTTTGCCTGCGCCTGGGCCTGTGCCACAGAGTTATTaGCCGAAGTGCCAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: VVILFHDSTIFSLPAPGPVPQSY*PKCQWA
Trigger: AGCCCACTGGCACTTCGGGCAATAACTCTGTGGCAC...AGGCCCAGGCGCAGGCAAAGAGAAGATGGTGCTGTCATGAAATAAAATTACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR TCA 90 bp GTTGTAATTTTATTTCATGACAGCACCATCTTCTCTTTGCCTGCGCCTGGGCCTTGGATTCCTTCTCTCTaGTTTGATGGGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VVILFHDSTIFSLPAPGPWIPSL*FDGWLG
Trigger: CCCCAGCCACCCATCAAATCAGAGAGAAGGAATCCA...AGGCCCAGGCGCAGGCAAAGAGAAGATGGTGCTGTCATGAAATAAAATTACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CCA 90 bp AGTGATATCTTTGTCTGTGGCCCTCGGCTCAAGGTTCATGGCATACAAATCAGAGAGAATTTCAGGGCCTaGAGGCACAGCAAAGACAGG +
Preference number: 4 (lower is better)
Translates to: SDIFVCGPRLKVHGIQIRENFRA*RHSKDR
Trigger: CCTGTCTTTGCTGTGCCTCCAGGCCCTGAAATTCTC...TCTGATTTGTATGCCATGAACCTTGAGCCGAGGGCCACAGACAAAGATATCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606474.1
CDS-3UTR TCA 90 bp GTTGTAATTTTATTTCATGACAGCACCATCTTCTCTTTGCCTGCGCCTGGGCCTATGGCTGGTGGCATGTaGGTTTGTGACTTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: VVILFHDSTIFSLPAPGPMAGGM*VCDFCL
Trigger: GAGACAGAAGTCACAAACTCACATGCCACCAGCCAT...AGGCCCAGGCGCAGGCAAAGAGAAGATGGTGCTGTCATGAAATAAAATTACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338130.7
CDS-3UTR GCA 90 bp GTTGTAATTTTATTTCATGACAGCACCATCTTCTCTTTGCCTGCGCCTGGGCCTAAGTGTAATGTGCCATaGTGGAGTGGCCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: VVILFHDSTIFSLPAPGPKCNVP*WSGHRK
Trigger: CTTCCTGTGGCCACTCCAGCATGGCACATTACACTT...AGGCCCAGGCGCAGGCAAAGAGAAGATGGTGCTGTCATGAAATAAAATTACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp GTTGTAATTTTATTTCATGACAGCACCATCTTCTCTTTGCCTGCGCCTGGGCCTCACAGAAGTGTAATGTaGCATGCTGGAGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: VVILFHDSTIFSLPAPGPHRSVM*HAGVAT
Trigger: TGTGGCCACTCCAGCATGGCACATTACACTTCTGTG...AGGCCCAGGCGCAGGCAAAGAGAAGATGGTGCTGTCATGAAATAAAATTACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR TCA 90 bp GTTGTAATTTTATTTCATGACAGCACCATCTTCTCTTTGCCTGCGCCTGGGCCTTCTTCAAGGATCCGTTaGAAGACTTGGGTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: VVILFHDSTIFSLPAPGPSSRIR*KTWVPG
Trigger: ACCAGGAACCCAAGTCTTTCAACGGATCCTTGAAGA...AGGCCCAGGCGCAGGCAAAGAGAAGATGGTGCTGTCATGAAATAAAATTACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR TCA 90 bp GTTGTAATTTTATTTCATGACAGCACCATCTTCTCTTTGCCTGCGCCTGGGCCTGGAGCAAAGCTGATCTaGGGGGCAAGGACTTTAAAT +
Preference number: 4 (lower is better)
Translates to: VVILFHDSTIFSLPAPGPGAKLI*GARTLN
Trigger: ATTTAAAGTCCTTGCCCCTCAGATCAGCTTTGCTCC...AGGCCCAGGCGCAGGCAAAGAGAAGATGGTGCTGTCATGAAATAAAATTACAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR TCA 90 bp GTTGTAATTTTATTTCATGACAGCACCATCTTCTCTTTGCCTGCGCCTGGGCCTGGTGTGCATAGACAATaGGTACTTTCTTACCTGCCA +
Preference number: 4 (lower is better)
Translates to: VVILFHDSTIFSLPAPGPGVHRQ*VLSYLP
Trigger: TGGCAGGTAAGAAAGTACTCATTGTCTATGCACACC...AGGCCCAGGCGCAGGCAAAGAGAAGATGGTGCTGTCATGAAATAAAATTACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR TCA 90 bp GTTGTAATTTTATTTCATGACAGCACCATCTTCTCTTTGCCTGCGCCTGGGCCTATCGAGAATCTCCATTaGCTCCTGTCTTCGTGTACA +
Preference number: 4 (lower is better)
Translates to: VVILFHDSTIFSLPAPGPIENLH*LLSSCT
Trigger: TGTACACGAAGACAGGAGTCAATGGAGATTCTCGAT...AGGCCCAGGCGCAGGCAAAGAGAAGATGGTGCTGTCATGAAATAAAATTACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR GCA 90 bp GTTGTAATTTTATTTCATGACAGCACCATCTTCTCTTTGCCTGCGCCTGGGCCTTCCCGAACCTTTTTCTaGTCATCAGTGATGTCGCTA +
Preference number: 4 (lower is better)
Translates to: VVILFHDSTIFSLPAPGPSRTFF*SSVMSL
Trigger: TAGCGACATCACTGATGAGCAGAAAAAGGTTCGGGA...AGGCCCAGGCGCAGGCAAAGAGAAGATGGTGCTGTCATGAAATAAAATTACAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR TCA 90 bp AGTGATATCTTTGTCTGTGGCCCTCGGCTCAAGGTTCATGGCATACAAATCAGAGGTGTGCATAGACAATaGGTACTTTCTTACCCAAGA +
Preference number: 4 (lower is better)
Translates to: SDIFVCGPRLKVHGIQIRGVHRQ*VLSYPR
Trigger: TCTTGGGTAAGAAAGTACTCATTGTCTATGCACACC...TCTGATTTGTATGCCATGAACCTTGAGCCGAGGGCCACAGACAAAGATATCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606474.1
CDS-3UTR GCA 90 bp GTTGTAATTTTATTTCATGACAGCACCATCTTCTCTTTGCCTGCGCCTGGGCCTTCTTTCTTCTTCGGATaGAATTTCAGGAGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: VVILFHDSTIFSLPAPGPSFFFG*NFRSKA
Trigger: AGCTTTGCTCCTGAAATTGCATCCGAAGAAGAAAGA...AGGCCCAGGCGCAGGCAAAGAGAAGATGGTGCTGTCATGAAATAAAATTACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS GCA 90 bp CCGCAGGACTGGGACCCGCGTCTCCCCAAGGACCGCTCTAGGAGTTaGGCCAGGTTCCGGCCGCACTGGACCGCGCACTCGCTGACGCCT +
Preference number: 5 (lower is better)
Translates to: PQDWDPRLPKDRSRS*ARFRPHWTAHSLTP
Trigger: AGGCGTCAGCGAGTGCGCGGTCCAGTGCGGCCGGAACCTGGCGCAACTCCTAGAGCGGTCCTTGGGGAGACGCGGGTCCCAGTCCTGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380455.11
ENST00000397717.7
CDS CCA 90 bp GCGTTCCGTGAGAGCCAAGCACGATCCTATGTACAGAATGGTCCCTaGCCCGGGCGCGACGACCCACAGGGCCATATGGCCGGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: AFRESQARSYVQNGP*PGRDDPQGHMAGQL
Trigger: CAGCTGGCCGGCCATATGGCCCTGTGGGTCGTCGCGCCCGGGCCAGGGACCATTCTGTACATAGGATCGTGCTTGGCTCTCACGGAACGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380430.6
CDS TCA 90 bp CACCAGACGATTCGACACCGGGACCCTGCGTGTGGGCGCGTTCCGTaGGAGCCAAGCACGATCCTATGTACAGAATGGTCCCTGGCCCGG +
Preference number: 5 (lower is better)
Translates to: HQTIRHRDPACGRVP*EPSTILCTEWSLAR
Trigger: CCGGGCCAGGGACCATTCTGTACATAGGATCGTGCTTGGCTCTCACGGAACGCGCCCACACGCAGGGTCCCGGTGTCGAATCGTCTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380430.6
CDS CCA 90 bp CGAAGTGCCAGTGGGCTGTGCAGGGGATGGGCTCTTCCTTCCAGATaGTCTGCAGCCTCTGGGACCACGCAGCCACCATCCCCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: RSASGLCRGWALPSR*SAASGTTQPPSPFF
Trigger: AAAGAAAGGGGATGGTGGCTGCGTGGTCCCAGAGGCTGCAGACCATCTGGAAGGAAGAGCCCATCCCCTGCACAGCCCACTGGCACTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CAA 90 bp TGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCACAGGCTAGCCAGAGACCTTaGCTTGTAGGCTTCGTGGGT +
Preference number: 5 (lower is better)
Translates to: CLRLGLLVCCLRDAHVPQASQRP*LVGFVG
Trigger: ACCCACGAAGCCTACAAGCAAAGGTCTCTGGCTAGC...CTGTGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS GCA 90 bp TGCCAGTGGGCTGTGCAGGGGATGGGCTCTTCCTTCCAGATGGTCTaGAGCCTCTGGGACCACGCAGCCACCATCCCCTTTCTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: CQWAVQGMGSSFQMV*SLWDHAATIPFLSS
Trigger: AGAAGAAAGAAAGGGGATGGTGGCTGCGTGGTCCCAGAGGCTGCAGACCATCTGGAAGGAAGAGCCCATCCCCTGCACAGCCCACTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CAA 90 bp CTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCACCAGGCCAGGTGCCCTaGCTGTGTTTAAGGTACATC +
Preference number: 5 (lower is better)
Translates to: LCLRLGLLVCCLRDAHVPPGQVP*LCLRYI
Trigger: GATGTACCTTAAACACAGCAAGGGCACCTGGCCTGG...TGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338130.7
CDS-3UTR CAA 90 bp TCTTCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACCGTGCCACAGAGTTATaGCCCGAAGTGCCAGTGGGC +
Preference number: 5 (lower is better)
Translates to: SSLCLRLGLLVCCLRDAHRATEL*PEVPVG
Trigger: GCCCACTGGCACTTCGGGCAATAACTCTGTGGCACG...GTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS TCA 90 bp ATCTTCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTaGTGCCCACGTGCCACAGAGTTATTGCCCGAAGTGCCAGTGGGC +
Preference number: 5 (lower is better)
Translates to: IFSLPAPGPPSVLLT*CPRATELLPEVPVG
Trigger: GCCCACTGGCACTTCGGGCAATAACTCTGTGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGAAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS GCA 90 bp TGCTGCTTACGTGATGCCCACGTGCCACAGAGTTATTGCCCGAAGTaGCAGTGGGCTGTGCAGGGGATGGGCTCTTCCTTCCAGATGGTC +
Preference number: 5 (lower is better)
Translates to: CCLRDAHVPQSYCPK*QWAVQGMGSSFQMV
Trigger: GACCATCTGGAAGGAAGAGCCCATCCCCTGCACAGCCCACTGGCACTTCGGGCAATAACTCTGTGGCACGTGGGCATCACGTAAGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS GCA 90 bp CTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCACAGAGTTATTaGCCGAAGTGCCAGTGGGCTGTGCAGGGGATGGGCTCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: LLVCCLRDAHVPQSY*PKCQWAVQGMGSSF
Trigger: GAAGGAAGAGCCCATCCCCTGCACAGCCCACTGGCACTTCGGGCAATAACTCTGTGGCACGTGGGCATCACGTAAGCAGCACACTAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS CCA 90 bp TTACGTGATGCCCACGTGCCACAGAGTTATTGCCCGAAGTGCCAGTaGGCTGTGCAGGGGATGGGCTCTTCCTTCCAGATGGTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: LRDAHVPQSYCPKCQ*AVQGMGSSFQMVCS
Trigger: GCTGCAGACCATCTGGAAGGAAGAGCCCATCCCCTGCACAGCCCACTGGCACTTCGGGCAATAACTCTGTGGCACGTGGGCATCACGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CAA 90 bp CTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCAGTACCAGTGATATCTTaGTCTGTGGCCCTCGGCTCA +
Preference number: 5 (lower is better)
Translates to: LCLRLGLLVCCLRDAHVPVPVIS*SVALGS
Trigger: TGAGCCGAGGGCCACAGACAAAGATATCACTGGTAC...TGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS GCA 90 bp ACAGCACCATCTTCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTaGTTACGTGATGCCCACGTGCCACAGAGTTATTGCCCGAAGTGC +
Preference number: 5 (lower is better)
Translates to: TAPSSLCLRLGLLVC*LRDAHVPQSYCPKC
Trigger: GCACTTCGGGCAATAACTCTGTGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGAAGATGGTGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CAA 90 bp CTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCATTCCTTCTCTCTGATTaGATGGGTGGCTGGGGCTTT +
Preference number: 5 (lower is better)
Translates to: LCLRLGLLVCCLRDAHVPFLLSD*MGGWGF
Trigger: AAAGCCCCAGCCACCCATCAAATCAGAGAGAAGGAA...TGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CAA 90 bp TGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCACAGTTCTTCAAGGATCCGTaGAAAGACTTGGGTTCCTGG +
Preference number: 5 (lower is better)
Translates to: CLRLGLLVCCLRDAHVPQFFKDP*KDLGSW
Trigger: CCAGGAACCCAAGTCTTTCAACGGATCCTTGAAGAA...CTGTGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CAA 90 bp TCTTCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGCTAGCCAGAGACCTTaGCTTGTAGGCTTCGTGGGT +
Preference number: 5 (lower is better)
Translates to: SSLCLRLGLLVCCLRDAHASQRP*LVGFVG
Trigger: ACCCACGAAGCCTACAAGCAAAGGTCTCTGGCTAGC...GTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS GCA 90 bp ATGACAGCACCATCTTCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTaGTGCTTACGTGATGCCCACGTGCCACAGAGTTATTGCCCGAAG +
Preference number: 5 (lower is better)
Translates to: MTAPSSLCLRLGLLV*CLRDAHVPQSYCPK
Trigger: CTTCGGGCAATAACTCTGTGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGAAGATGGTGCTGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CAA 90 bp CTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCATTCTTCAAGGATCCGTaGAAAGACTTGGGTTCCTGG +
Preference number: 5 (lower is better)
Translates to: LCLRLGLLVCCLRDAHVPFFKDP*KDLGSW
Trigger: CCAGGAACCCAAGTCTTTCAACGGATCCTTGAAGAA...TGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CAA 90 bp TCTTCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTACCAGTGATATCTTaGTCTGTGGCCCTCGGCTCA +
Preference number: 5 (lower is better)
Translates to: SSLCLRLGLLVCCLRDAHVPVIS*SVALGS
Trigger: TGAGCCGAGGGCCACAGACAAAGATATCACTGGTAC...GTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS GCA 90 bp CTTTCTTACCCAAGATGCCTCCTGGGGTTCATTCACTTGAGCCCCTaGTACAGCCCAGGGAGAATTTCAGGGCCTGGAGGCACAGCAAAG +
Preference number: 5 (lower is better)
Translates to: LSYPRCLLGFIHLSP*YSPGRISGPGGTAK
Trigger: CTTTGCTGTGCCTCCAGGCCCTGAAATTCTCCCTGGGCTGTAGCAGGGGCTCAAGTGAATGAACCCCAGGAGGCATCTTGGGTAAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606474.1
CDS-3UTR CAA 90 bp TCTTCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGCTCACCACTCCCTTTaGTATTCCTTGGCCCAGTTT +
Preference number: 5 (lower is better)
Translates to: SSLCLRLGLLVCCLRDAHAHHSL*YSLAQF
Trigger: AAACTGGGCCAAGGAATACAAAAGGGAGTGGTGAGC...GTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338130.7
CDS-3UTR CAA 90 bp TCTTCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACTTCCTTCTCTCTGATTaGATGGGTGGCTGGGGCTTT +
Preference number: 5 (lower is better)
Translates to: SSLCLRLGLLVCCLRDAHFLLSD*MGGWGF
Trigger: AAAGCCCCAGCCACCCATCAAATCAGAGAGAAGGAA...GTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CAA 90 bp CTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGCCATATCGAGAATCTCCATaGACTCCTGTCTTCGTGTAC +
Preference number: 5 (lower is better)
Translates to: LCLRLGLLVCCLRDAHVPYRESP*TPVFVY
Trigger: GTACACGAAGACAGGAGTCAATGGAGATTCTCGATA...TGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS TCA 90 bp ATGTGCCATGCTGGAGTGGCCACAGGAAGTATCGAGAATCTCCATTaGCTCCTGTCTTCGTGTACATCTCGGCCGTGCCTCCCGTGGTTA +
Preference number: 5 (lower is better)
Translates to: MCHAGVATGSIENLH*LLSSCTSRPCLPWL
Trigger: TAACCACGGGAGGCACGGCCGAGATGTACACGAAGACAGGAGTCAATGGAGATTCTCGATACTTCCTGTGGCCACTCCAGCATGGCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CAA 90 bp TCTTCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACTTCTTCAAGGATCCGTaGAAAGACTTGGGTTCCTGG +
Preference number: 5 (lower is better)
Translates to: SSLCLRLGLLVCCLRDAHFFKDP*KDLGSW
Trigger: CCAGGAACCCAAGTCTTTCAACGGATCCTTGAAGAA...GTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CAA 90 bp TCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACGTGTATCGAGAATCTCCATaGACTCCTGTCTTCGTGTAC +
Preference number: 5 (lower is better)
Translates to: SLCLRLGLLVCCLRDAHVYRESP*TPVFVY
Trigger: GTACACGAAGACAGGAGTCAATGGAGATTCTCGATA...CACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CAA 90 bp GTTGTAATTTTATTTCATGACAGCACCATCTTCTCTTTGCCTGCGCCTGGGCCTCGTGCCACAGAGTTATaGCCCGAAGTGCCAGTGGGC +
Preference number: 5 (lower is better)
Translates to: VVILFHDSTIFSLPAPGPRATEL*PEVPVG
Trigger: GCCCACTGGCACTTCGGGCAATAACTCTGTGGCACG...AGGCCCAGGCGCAGGCAAAGAGAAGATGGTGCTGTCATGAAATAAAATTACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS TCA 90 bp TCCTTGGCCCAGTTTACATGTTTACATCATATGGCTGGTGGCATGTaGGTTTGTGACTTCTGTCTCCATCCCCCTTCCGACCAGCGCACT +
Preference number: 5 (lower is better)
Translates to: SLAQFTCLHHMAGGM*VCDFCLHPPSDQRT
Trigger: AGTGCGCTGGTCGGAAGGGGGATGGAGACAGAAGTCACAAACTCACATGCCACCAGCCATATGATGTAAACATGTAAACTGGGCCAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338130.7
CDS-3UTR CAA 90 bp TCTTCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTGATGCCCACTCCCTTTTGTATTCCTaGGCCCAGTTTACATGTTTA +
Preference number: 5 (lower is better)
Translates to: SSLCLRLGLLVCCLRDAHSLLYS*AQFTCL
Trigger: TAAACATGTAAACTGGGCCAAGGAATACAAAAGGGA...GTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338130.7
CDS-3UTR CAA 90 bp GTTGTAATTTTATTTCATGACAGCACCATCTTCTCTTTGCCTGCGCCTGGGCCTGCTAGCCAGAGACCTTaGCTTGTAGGCTTCGTGGGT +
Preference number: 5 (lower is better)
Translates to: VVILFHDSTIFSLPAPGPASQRP*LVGFVG
Trigger: ACCCACGAAGCCTACAAGCAAAGGTCTCTGGCTAGC...AGGCCCAGGCGCAGGCAAAGAGAAGATGGTGCTGTCATGAAATAAAATTACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CAA 90 bp AGTGATATCTTTGTCTGTGGCCCTCGGCTCAAGGTTCATGGCATACAAATCAGAGGCAGGGCCCCACTTTaGAGGAACCTAAATTCTGCC +
Preference number: 5 (lower is better)
Translates to: SDIFVCGPRLKVHGIQIRGRAPL*RNLNSA
Trigger: GGCAGAATTTAGGTTCCTCAAAAGTGGGGCCCTGCC...TCTGATTTGTATGCCATGAACCTTGAGCCGAGGGCCACAGACAAAGATATCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606474.1
CDS TCA 90 bp TACTTTCTTACCTGCCATAGCGTAAGAAGGTGGATTCCTTCTCTCTaGTTTGATGGGTGGCTGGGGCTTTCCTGCGTAGTCTCTCTTCAG +
Preference number: 5 (lower is better)
Translates to: YFLTCHSVRRWIPSL*FDGWLGLSCVVSLQ
Trigger: CTGAAGAGAGACTACGCAGGAAAGCCCCAGCCACCCATCAAATCAGAGAGAAGGAATCCACCTTCTTACGCTATGGCAGGTAAGAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
ENST00000380472.7
ENST00000397717.7
ENST00000426637.5
CDS TCA 90 bp GAACCTAAATTCTGCCATAGCGTAAGAAGGTGGATTCCTTCTCTCTaGTTTGATGGGTGGCTGGGGCTTTCCTGCGTAGTCTCTCTTCAG +
Preference number: 5 (lower is better)
Translates to: EPKFCHSVRRWIPSL*FDGWLGLSCVVSLQ
Trigger: CTGAAGAGAGACTACGCAGGAAAGCCCCAGCCACCCATCAAATCAGAGAGAAGGAATCCACCTTCTTACGCTATGGCAGAATTTAGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606474.1
CDS-3UTR CAA 90 bp GTTGTAATTTTATTTCATGACAGCACCATCTTCTCTTTGCCTGCGCCTGGGCCTGTACCAGTGATATCTTaGTCTGTGGCCCTCGGCTCA +
Preference number: 5 (lower is better)
Translates to: VVILFHDSTIFSLPAPGPVPVIS*SVALGS
Trigger: TGAGCCGAGGGCCACAGACAAAGATATCACTGGTAC...AGGCCCAGGCGCAGGCAAAGAGAAGATGGTGCTGTCATGAAATAAAATTACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CAA 90 bp GTTGTAATTTTATTTCATGACAGCACCATCTTCTCTTTGCCTGCGCCTGGGCCTTTCTTCAAGGATCCGTaGAAAGACTTGGGTTCCTGG +
Preference number: 5 (lower is better)
Translates to: VVILFHDSTIFSLPAPGPFFKDP*KDLGSW
Trigger: CCAGGAACCCAAGTCTTTCAACGGATCCTTGAAGAA...AGGCCCAGGCGCAGGCAAAGAGAAGATGGTGCTGTCATGAAATAAAATTACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS-3UTR CAA 90 bp AGTGATATCTTTGTCTGTGGCCCTCGGCTCAAGGTTCATGGCATACAAATCAGATTCTTCAAGGATCCGTaGAAAGACTTGGGTTCCTGG +
Preference number: 5 (lower is better)
Translates to: SDIFVCGPRLKVHGIQIRFFKDP*KDLGSW
Trigger: CCAGGAACCCAAGTCTTTCAACGGATCCTTGAAGAA...TCTGATTTGTATGCCATGAACCTTGAGCCGAGGGCCACAGACAAAGATATCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606474.1
CDS TCA 90 bp CCCTTTCTTTCTTCTTCGGATGCAATTTCAGGAGCAAAGCTGATCTaGGGGGCAAGGACTTTAAATCCACAGAAGTGTAATGTGCCATGC +
Preference number: 5 (lower is better)
Translates to: PFLSSSDAISGAKLI*GARTLNPQKCNVPC
Trigger: GCATGGCACATTACACTTCTGTGGATTTAAAGTCCTTGCCCCTCAGATCAGCTTTGCTCCTGAAATTGCATCCGAAGAAGAAAGAAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS CCA 90 bp ACTCCCTTTTGTATTCCTTGGCCCAGTTTACATGTTTACATCATATaGCTGGTGGCATGTGAGTTTGTGACTTCTGTCTCCATCCCCCTT +
Preference number: 5 (lower is better)
Translates to: TPFCIPWPSLHVYII*LVACEFVTSVSIPL
Trigger: AAGGGGGATGGAGACAGAAGTCACAAACTCACATGCCACCAGCCATATGATGTAAACATGTAAACTGGGCCAAGGAATACAAAAGGGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338130.7
CDS-3UTR CAA 90 bp GTTGTAATTTTATTTCATGACAGCACCATCTTCTCTTTGCCTGCGCCTGGGCCTTATCGAGAATCTCCATaGACTCCTGTCTTCGTGTAC +
Preference number: 5 (lower is better)
Translates to: VVILFHDSTIFSLPAPGPYRESP*TPVFVY
Trigger: GTACACGAAGACAGGAGTCAATGGAGATTCTCGATA...AGGCCCAGGCGCAGGCAAAGAGAAGATGGTGCTGTCATGAAATAAAATTACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS GCA 90 bp CTTACAAGAATGAACCTAAAGCTTTGTAAATGTTGCCAGTGTTTCTaGAGACTGGGGGAACACCTTATCCTGATTCCCAAAGTGATTGCC +
Preference number: 5 (lower is better)
Translates to: LTRMNLKLCKCCQCF*RLGEHLILIPKVIA
Trigger: GGCAATCACTTTGGGAATCAGGATAAGGTGTTCCCCCAGTCTGCAGAAACACTGGCAACATTTACAAAGCTTTAGGTTCATTCTTGTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338130.7
CDS GCA 90 bp CTGATTCCCAAAGTGATTGCCCGAAATCATGTTGTTTGTATGAAATaGTTCATTTTCACTCCTCTAGACAGGGCATCCATTCTTCAGTGT +
Preference number: 5 (lower is better)
Translates to: LIPKVIARNHVVCMK*FIFTPLDRASILQC
Trigger: ACACTGAAGAATGGATGCCCTGTCTAGAGGAGTGAAAATGAAGCATTTCATACAAACAACATGATTTCGGGCAATCACTTTGGGAATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338130.7
CDS TCA 72 bp GCGCCAGGTTCCGGCCGCACTGGACCGCGCACTCGCTaGCGCCTGGAGGGCGGGAGCGCTGCGACTGCGCCC +
Preference number: 6 (lower is better)
Translates to: APGSGRTGPRTR*RLEGGSAATAP
Trigger: GGGCGCAGTCGCAGCGCTCCCGCCCTCCAGGCGTCAGCGAGTGCGCGGTCCAGTGCGGCCGGAACCTGGCGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380455.11
ENST00000397717.7
CDS GCA 72 bp ACCGCGCACTCGCTGACGCCTGGAGGGCGGGAGCGCTaGGACTGCGCCCCCGGGGACCACGGACCGGTGCCA +
Preference number: 6 (lower is better)
Translates to: TAHSLTPGGRER*DCAPGDHGPVP
Trigger: TGGCACCGGTCCGTGGTCCCCGGGGGCGCAGTCGCAGCGCTCCCGCCCTCCAGGCGTCAGCGAGTGCGCGGT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380455.11
ENST00000397717.7
CDS GCA 72 bp TGGGACCCGCGTCTCCCCAAGGACCGCTCTAGGAGTTaGGCCAGGTTCCGGCCGCACTGGACCGCGCACTCG +
Preference number: 6 (lower is better)
Translates to: WDPRLPKDRSRS*ARFRPHWTAHS
Trigger: CGAGTGCGCGGTCCAGTGCGGCCGGAACCTGGCGCAACTCCTAGAGCGGTCCTTGGGGAGACGCGGGTCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338130.7
ENST00000380455.11
ENST00000397717.7
CDS CCA 72 bp AGTGGGCTGTGCAGGGGATGGGCTCTTCCTTCCAGATaGTCTGCAGCCTCTGGGACCACGCAGCCACCATCC +
Preference number: 6 (lower is better)
Translates to: SGLCRGWALPSR*SAASGTTQPPS
Trigger: GGATGGTGGCTGCGTGGTCCCAGAGGCTGCAGACCATCTGGAAGGAAGAGCCCATCCCCTGCACAGCCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS CCA 72 bp GAGAGCCAAGCACGATCCTATGTACAGAATGGTCCCTaGCCCGGGCGCGACGACCCACAGGGCCATATGGCC +
Preference number: 6 (lower is better)
Translates to: ESQARSYVQNGP*PGRDDPQGHMA
Trigger: GGCCATATGGCCCTGTGGGTCGTCGCGCCCGGGCCAGGGACCATTCTGTACATAGGATCGTGCTTGGCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380430.6
CDS GCA 72 bp GCTGTGCAGGGGATGGGCTCTTCCTTCCAGATGGTCTaGAGCCTCTGGGACCACGCAGCCACCATCCCCTTT +
Preference number: 6 (lower is better)
Translates to: AVQGMGSSFQMV*SLWDHAATIPF
Trigger: AAAGGGGATGGTGGCTGCGTGGTCCCAGAGGCTGCAGACCATCTGGAAGGAAGAGCCCATCCCCTGCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS CCA 72 bp GAGCCCCTGCTACAGCCCAGGGAGAATTTCAGGGCCTaGAGGCACAGCAAAGACAGGATAGGCAGGGCCCCA +
Preference number: 6 (lower is better)
Translates to: EPLLQPRENFRA*RHSKDRIGRAP
Trigger: TGGGGCCCTGCCTATCCTGTCTTTGCTGTGCCTCCAGGCCCTGAAATTCTCCCTGGGCTGTAGCAGGGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606474.1
CDS GCA 72 bp CGTGATGCCCACGTGCCACAGAGTTATTGCCCGAAGTaGCAGTGGGCTGTGCAGGGGATGGGCTCTTCCTTC +
Preference number: 6 (lower is better)
Translates to: RDAHVPQSYCPK*QWAVQGMGSSF
Trigger: GAAGGAAGAGCCCATCCCCTGCACAGCCCACTGGCACTTCGGGCAATAACTCTGTGGCACGTGGGCATCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS GCA 72 bp TGCTGCTTACGTGATGCCCACGTGCCACAGAGTTATTaGCCGAAGTGCCAGTGGGCTGTGCAGGGGATGGGC +
Preference number: 6 (lower is better)
Translates to: CCLRDAHVPQSY*PKCQWAVQGMG
Trigger: GCCCATCCCCTGCACAGCCCACTGGCACTTCGGGCAATAACTCTGTGGCACGTGGGCATCACGTAAGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS CCA 72 bp GCCCACGTGCCACAGAGTTATTGCCCGAAGTGCCAGTaGGCTGTGCAGGGGATGGGCTCTTCCTTCCAGATG +
Preference number: 6 (lower is better)
Translates to: AHVPQSYCPKCQ*AVQGMGSSFQM
Trigger: CATCTGGAAGGAAGAGCCCATCCCCTGCACAGCCCACTGGCACTTCGGGCAATAACTCTGTGGCACGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS CCA 72 bp ATTCCACCAGACGATTCGACACCGGGACCCTGCGTGTaGGCGCGTTCCGTGAGAGCCAAGCACGATCCTATG +
Preference number: 6 (lower is better)
Translates to: IPPDDSTPGPCV*ARSVRAKHDPM
Trigger: CATAGGATCGTGCTTGGCTCTCACGGAACGCGCCCACACGCAGGGTCCCGGTGTCGAATCGTCTGGTGGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380430.6
CDS TCA 72 bp TTGCCTGCGCCTGGGCCTCCTAGTGTGCTGCTTACGTaGTGCCCACGTGCCACAGAGTTATTGCCCGAAGTG +
Preference number: 6 (lower is better)
Translates to: LPAPGPPSVLLT*CPRATELLPEV
Trigger: CACTTCGGGCAATAACTCTGTGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS TCA 72 bp ATTCGACACCGGGACCCTGCGTGTGGGCGCGTTCCGTaGGAGCCAAGCACGATCCTATGTACAGAATGGTCC +
Preference number: 6 (lower is better)
Translates to: IRHRDPACGRVP*EPSTILCTEWS
Trigger: GGACCATTCTGTACATAGGATCGTGCTTGGCTCTCACGGAACGCGCCCACACGCAGGGTCCCGGTGTCGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380430.6
CDS GCA 72 bp CCAAGATGCCTCCTGGGGTTCATTCACTTGAGCCCCTaGTACAGCCCAGGGAGAATTTCAGGGCCTGGAGGC +
Preference number: 6 (lower is better)
Translates to: PRCLLGFIHLSP*YSPGRISGPGG
Trigger: GCCTCCAGGCCCTGAAATTCTCCCTGGGCTGTAGCAGGGGCTCAAGTGAATGAACCCCAGGAGGCATCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606474.1
CDS CCA 72 bp CTCCTGTCTTCGTGTACATCTCGGCCGTGCCTCCCGTaGTTACGGAAAGGAGCGCTAGTTTACCCTGGAGCA +
Preference number: 6 (lower is better)
Translates to: LLSSCTSRPCLP*LRKGALVYPGA
Trigger: TGCTCCAGGGTAAACTAGCGCTCCTTTCCGTAACCACGGGAGGCACGGCCGAGATGTACACGAAGACAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380455.11
CDS GCA 72 bp TCTTCTCTTTGCCTGCGCCTGGGCCTCCTAGTGTGCTaGTTACGTGATGCCCACGTGCCACAGAGTTATTGC +
Preference number: 6 (lower is better)
Translates to: SSLCLRLGLLVC*LRDAHVPQSYC
Trigger: GCAATAACTCTGTGGCACGTGGGCATCACGTAAGCAGCACACTAGGAGGCCCAGGCGCAGGCAAAGAGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS TCA 72 bp GCTGGAGTGGCCACAGGAAGTATCGAGAATCTCCATTaGCTCCTGTCTTCGTGTACATCTCGGCCGTGCCTC +
Preference number: 6 (lower is better)
Translates to: AGVATGSIENLH*LLSSCTSRPCL
Trigger: GAGGCACGGCCGAGATGTACACGAAGACAGGAGTCAATGGAGATTCTCGATACTTCCTGTGGCCACTCCAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS CCA 72 bp GCACAGCACCCTATCCATCCAGCCCTTCAGGATGGCTaGCACGCTGAACCAGTACAGCGGGAACTGAAATAT +
Preference number: 6 (lower is better)
Translates to: AQHPIHPALQDG*HAEPVQRELKY
Trigger: ATATTTCAGTTCCCGCTGTACTGGTTCAGCGTGCCAGCCATCCTGAAGGGCTGGATGGATAGGGTGCTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380455.11
ENST00000380472.7
ENST00000397717.7
CDS CAA 90 bp AATGTGCCATGCTGGAGTGGCCACAGGAAGTATCGAGAATCTCCATaGACTCCTGTCTTCGTGTACATCTCGGCCGTGCCTCCCGTGGTT +
Preference number: 6 (lower is better)
Translates to: NVPCWSGHRKYRESP*TPVFVYISAVPPVV
Trigger: AACCACGGGAGGCACGGCCGAGATGTACACGAAGACAGGAGTCAATGGAGATTCTCGATACTTCCTGTGGCCACTCCAGCATGGCACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS TCA 72 bp CCCTATCCATCCAGCCCTTCAGGATGGCTGGCACGCTaGACCAGTACAGCGGGAACTGAAATATCACTAGGT +
Preference number: 6 (lower is better)
Translates to: PYPSSPSGWLAR*TSTAGTEISLG
Trigger: ACCTAGTGATATTTCAGTTCCCGCTGTACTGGTTCAGCGTGCCAGCCATCCTGAAGGGCTGGATGGATAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380455.11
ENST00000380472.7
ENST00000397717.7
CDS CCA 72 bp CTCCTGTCTTCGTGTACATCTCGGCCGTGCCTCCCGTaGTTACGGAAAGGAGCGCTAGTTTACCCTGAAATA +
Preference number: 6 (lower is better)
Translates to: LLSSCTSRPCLP*LRKGALVYPEI
Trigger: TATTTCAGGGTAAACTAGCGCTCCTTTCCGTAACCACGGGAGGCACGGCCGAGATGTACACGAAGACAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380441.5
ENST00000380454.8
CDS CAA 72 bp TGCTGGAGTGGCCACAGGAAGTATCGAGAATCTCCATaGACTCCTGTCTTCGTGTACATCTCGGCCGTGCCT +
Preference number: 6 (lower is better)
Translates to: CWSGHRKYRESP*TPVFVYISAVP
Trigger: AGGCACGGCCGAGATGTACACGAAGACAGGAGTCAATGGAGATTCTCGATACTTCCTGTGGCCACTCCAGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
CDS TCA 72 bp ACCTGCCATAGCGTAAGAAGGTGGATTCCTTCTCTCTaGTTTGATGGGTGGCTGGGGCTTTCCTGCGTAGTC +
Preference number: 6 (lower is better)
Translates to: TCHSVRRWIPSL*FDGWLGLSCVV
Trigger: GACTACGCAGGAAAGCCCCAGCCACCCATCAAATCAGAGAGAAGGAATCCACCTTCTTACGCTATGGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
ENST00000380472.7
ENST00000397717.7
ENST00000426637.5
CDS CAA 90 bp GCTGGGGCTTTCCTGCGTAGTCTCTCTTCAGCGAGTCCAGCAATCTaGGGCCCGCTGATTCCTACTTGTAATATGACTATGATACCAGCA +
Preference number: 6 (lower is better)
Translates to: AGAFLRSLSSASPAI*GPLIPTCNMTMIPA
Trigger: TGCTGGTATCATAGTCATATTACAAGTAGGAATCAGCGGGCCCAAGATTGCTGGACTCGCTGAAGAGAGACTACGCAGGAAAGCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380430.6
CDS TCA 72 bp ATGTTTACATCATATGGCTGGTGGCATGTGAGTTTGTaGCTTCTGTCTCCATCCCCCTTCCGACCAGCGCAC +
Preference number: 6 (lower is better)
Translates to: MFTSYGWWHVSL*LLSPSPFRPAH
Trigger: GTGCGCTGGTCGGAAGGGGGATGGAGACAGAAGTCACAAACTCACATGCCACCAGCCATATGATGTAAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338130.7
CDS TCA 72 bp TTCTGCCATAGCGTAAGAAGGTGGATTCCTTCTCTCTaGTTTGATGGGTGGCTGGGGCTTTCCTGCGTAGTC +
Preference number: 6 (lower is better)
Translates to: FCHSVRRWIPSL*FDGWLGLSCVV
Trigger: GACTACGCAGGAAAGCCCCAGCCACCCATCAAATCAGAGAGAAGGAATCCACCTTCTTACGCTATGGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606474.1
CDS GCA 72 bp TCTTCCAATTCCATAGCCATTGAATACAGCCTGCACTaGTTGACACACTCCCTTTCGGTTTCGTGCATTGGC +
Preference number: 6 (lower is better)
Translates to: SSNSIAIEYSLH*LTHSLSVSCIG
Trigger: GCCAATGCACGAAACCGAAAGGGAGTGTGTCAAGCAGTGCAGGCTGTATTCAATGGCTATGGAATTGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426637.5
CDS CAA 72 bp TTCCTGCGTAGTCTCTCTTCAGCGAGTCCAGCAATCTaGGGCCCGCTGATTCCTACTTGTAATATGACTATG +
Preference number: 6 (lower is better)
Translates to: FLRSLSSASPAI*GPLIPTCNMTM
Trigger: CATAGTCATATTACAAGTAGGAATCAGCGGGCCCAAGATTGCTGGACTCGCTGAAGAGAGACTACGCAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380430.6
CDS CAA 90 bp CCGAACCTTTTTCTGCTCATCAGTGATGTCGCTAGCCAGAGACCTTaGCTTGTAGGCTTCGTGGGTTTCCACTCCATAATTGAAAACCTC +
Preference number: 6 (lower is better)
Translates to: PNLFLLISDVASQRP*LVGFVGFHSIIENL
Trigger: GAGGTTTTCAATTATGGAGTGGAAACCCACGAAGCCTACAAGCAAAGGTCTCTGGCTAGCGACATCACTGATGAGCAGAAAAAGGTTCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
ENST00000380472.7
ENST00000397717.7
CDS TCA 72 bp CAGTTTACATGTTTACATCATATGGCTGGTGGCATGTaGGTTTGTGACTTCTGTCTCCATCCCCCTTCCGAC +
Preference number: 6 (lower is better)
Translates to: QFTCLHHMAGGM*VCDFCLHPPSD
Trigger: GTCGGAAGGGGGATGGAGACAGAAGTCACAAACTCACATGCCACCAGCCATATGATGTAAACATGTAAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338130.7
CDS CAA 72 bp TCAGTGTCCCCAGCTCACCACTCCCTTTTGTATTCCTaGGCCCAGTTTACATGTTTACATCATATGGCTGGT +
Preference number: 6 (lower is better)
Translates to: SVSPAHHSLLYS*AQFTCLHHMAG
Trigger: ACCAGCCATATGATGTAAACATGTAAACTGGGCCAAGGAATACAAAAGGGAGTGGTGAGCTGGGGACACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338130.7
CDS CAA 72 bp TTTCTGCTCATCAGTGATGTCGCTAGCCAGAGACCTTaGCTTGTAGGCTTCGTGGGTTTCCACTCCATAATT +
Preference number: 6 (lower is better)
Translates to: FLLISDVASQRP*LVGFVGFHSII
Trigger: AATTATGGAGTGGAAACCCACGAAGCCTACAAGCAAAGGTCTCTGGCTAGCGACATCACTGATGAGCAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338130.7
ENST00000380430.6
ENST00000380441.5
ENST00000380454.8
ENST00000380455.11
ENST00000380472.7
ENST00000397717.7
CDS GCA 72 bp ATGAACCTAAAGCTTTGTAAATGTTGCCAGTGTTTCTaGAGACTGGGGGAACACCTTATCCTGATTCCCAAA +
Preference number: 6 (lower is better)
Translates to: MNLKLCKCCQCF*RLGEHLILIPK
Trigger: TTTGGGAATCAGGATAAGGTGTTCCCCCAGTCTGCAGAAACACTGGCAACATTTACAAAGCTTTAGGTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338130.7
CDS CAA 90 bp ACACCTTATCCTGATTCCCAAAGTGATTGCCCGAAATCATGTTGTTaGTATGAAATGCTTCATTTTCACTCCTCTAGACAGGGCATCCAT +
Preference number: 6 (lower is better)
Translates to: TPYPDSQSDCPKSCC*YEMLHFHSSRQGIH
Trigger: ATGGATGCCCTGTCTAGAGGAGTGAAAATGAAGCATTTCATACAAACAACATGATTTCGGGCAATCACTTTGGGAATCAGGATAAGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338130.7
CDS CAA 72 bp CCTGATTCCCAAAGTGATTGCCCGAAATCATGTTGTTaGTATGAAATGCTTCATTTTCACTCCTCTAGACAG +
Preference number: 6 (lower is better)
Translates to: PDSQSDCPKSCC*YEMLHFHSSRQ
Trigger: CTGTCTAGAGGAGTGAAAATGAAGCATTTCATACAAACAACATGATTTCGGGCAATCACTTTGGGAATCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338130.7
CDS GCA 72 bp AAAGTGATTGCCCGAAATCATGTTGTTTGTATGAAATaGTTCATTTTCACTCCTCTAGACAGGGCATCCATT +
Preference number: 6 (lower is better)
Translates to: KVIARNHVVCMK*FIFTPLDRASI
Trigger: AATGGATGCCCTGTCTAGAGGAGTGAAAATGAAGCATTTCATACAAACAACATGATTTCGGGCAATCACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338130.7