Pregenerated sensors for NQO1-DT (Homo sapiens)

Ensembl gene IDs: ENSG00000262136

Ensembl transcript IDs: ENST00000575838.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	AGCACCGGAGCGCCTGCCTTGAGGAGCAGGGGTGGTGCAGTGGCATaGACCCAGGGAAGTGTGTTGTATGGGCCCCCAAGTGCAGAATCT	+
Preference number: 5 (lower is better) Translates to: STGAPALRSRGGAVA*TQGSVLYGPPSAES Trigger: AGATTCTGCACTTGGGGGCCCATACAACACACTTCCCTGGGTGCATGCCACTGCACCACCCCTGCTCCTCAAGGCAGGCGCTCCGGTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000575838.1
CDS GCA 90 bp	CAGGGAAGTGTGTTGTATGGGCCCCCAAGTGCAGAATCTGAATCTTaGAAAGGAAGAAACAAATTCGTCTCCACGGAGCATGTCTCCCCA	+
Preference number: 5 (lower is better) Translates to: QGSVLYGPPSAESES*KGRNKFVSTEHVSP Trigger: TGGGGAGACATGCTCCGTGGAGACGAATTTGTTTCTTCCTTTGCAAGATTCAGATTCTGCACTTGGGGGCCCATACAACACACTTCCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000575838.1
CDS GCA 72 bp	GCGCCTGCCTTGAGGAGCAGGGGTGGTGCAGTGGCATaGACCCAGGGAAGTGTGTTGTATGGGCCCCCAAGT	+
Preference number: 6 (lower is better) Translates to: APALRSRGGAVA*TQGSVLYGPPS Trigger: ACTTGGGGGCCCATACAACACACTTCCCTGGGTGCATGCCACTGCACCACCCCTGCTCCTCAAGGCAGGCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000575838.1
CDS GCA 72 bp	GAGCACCGGAGCGCCTGCCTTGAGGAGCAGGGGTGGTaGAGTGGCATGCACCCAGGGAAGTGTGTTGTATGG	+
Preference number: 6 (lower is better) Translates to: EHRSACLEEQGW*SGMHPGKCVVW Trigger: CCATACAACACACTTCCCTGGGTGCATGCCACTGCACCACCCCTGCTCCTCAAGGCAGGCGCTCCGGTGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000575838.1
CDS CCA 72 bp	TGTGAGCACCGGAGCGCCTGCCTTGAGGAGCAGGGGTaGTGCAGTGGCATGCACCCAGGGAAGTGTGTTGTA	+
Preference number: 6 (lower is better) Translates to: CEHRSACLEEQG*CSGMHPGKCVV Trigger: TACAACACACTTCCCTGGGTGCATGCCACTGCACCACCCCTGCTCCTCAAGGCAGGCGCTCCGGTGCTCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000575838.1
CDS CAA 72 bp	AGGGGTGGTGCAGTGGCATGCACCCAGGGAAGTGTGTaGTATGGGCCCCCAAGTGCAGAATCTGAATCTTGC	+
Preference number: 6 (lower is better) Translates to: RGGAVACTQGSV*YGPPSAESESC Trigger: GCAAGATTCAGATTCTGCACTTGGGGGCCCATACAACACACTTCCCTGGGTGCATGCCACTGCACCACCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000575838.1
CDS CAA 90 bp	TTGAGGAGCAGGGGTGGTGCAGTGGCATGCACCCAGGGAAGTGTGTaGTATGGGCCCCCAAGTGCAGAATCTGAATCTTGCAAAGGAAGA	+
Preference number: 6 (lower is better) Translates to: LRSRGGAVACTQGSV*YGPPSAESESCKGR Trigger: TCTTCCTTTGCAAGATTCAGATTCTGCACTTGGGGGCCCATACAACACACTTCCCTGGGTGCATGCCACTGCACCACCCCTGCTCCTCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000575838.1
CDS GCA 72 bp	GTGTTGTATGGGCCCCCAAGTGCAGAATCTGAATCTTaGAAAGGAAGAAACAAATTCGTCTCCACGGAGCAT	+
Preference number: 6 (lower is better) Translates to: VLYGPPSAESES*KGRNKFVSTEH Trigger: ATGCTCCGTGGAGACGAATTTGTTTCTTCCTTTGCAAGATTCAGATTCTGCACTTGGGGGCCCATACAACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000575838.1

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