Pregenerated sensors for NPW (Homo sapiens)
Ensembl gene IDs: ENSG00000183971Ensembl transcript IDs: ENST00000566435.4, ENST00000567649.1
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGGATTTTATTGACCGGACGGCAGGCGGGGTCTATGAGCGGCTCCTaGAAGCGCGCGGCCACTCCTCCTGGGTCAGGCGCGGAGGCGCCA | + |
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Preference number: 1 (lower is better) Translates to: RILLTGRQAGSMSGS*KRAATPPGSGAEAP Trigger: TGGCGCCTCCGCGCCTGACCCAGGAGGAGTGGCCGCGCGCTTCCAGGAGCCGCTCATAGACCCCGCCTGCCGTCCGGTCAATAAAATCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| 3UTR CCA 72 bp | TTGACCGGACGGCAGGCGGGGTCTATGAGCGGCTCCTaGAAGCGCGCGGCCACTCCTCCTGGGTCAGGCGCG | + |
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Preference number: 3 (lower is better) Translates to: LTGRQAGSMSGS*KRAATPPGSGA Trigger: CGCGCCTGACCCAGGAGGAGTGGCCGCGCGCTTCCAGGAGCCGCTCATAGACCCCGCCTGCCGTCCGGTCAA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS-3UTR TCA 90 bp | AGCGGCTCCTGGAAGCGCGCGGCCACTCCTCCTGGGTCAGGCGCGGAGGCGCCAAGCGACGCAGCCCCATaGGCAGGCCAGCGGCGCGGC | + |
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Preference number: 4 (lower is better) Translates to: SGSWKRAATPPGSGAEAPSDAAP*AGQRRG Trigger: GCCGCGCCGCTGGCCTGCTCATGGGGCTGCGTCGCT...TGGCGCCTCCGCGCCTGACCCAGGAGGAGTGGCCGCGCGCTTCCAGGAGCCGCT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS-3UTR TCA 90 bp | ATGAGCGGCTCCTGGAAGCGCGCGGCCACTCCTCCTGGGTCAGGCGCGGAGGCGGGCAGGCGGGGTCTATaGGCGGCTCCTGGAAGCGCG | + |
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Preference number: 4 (lower is better) Translates to: MSGSWKRAATPPGSGAEAGRRGL*AAPGSA Trigger: CGCGCTTCCAGGAGCCGCTCATAGACCCCGCCTGCC...CGCCTCCGCGCCTGACCCAGGAGGAGTGGCCGCGCGCTTCCAGGAGCCGCTCAT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS-3UTR CCA 90 bp | CCTGGAAGCGCGCGGCCACTCCTCCTGGGTCAGGCGCGGAGGCGCCACGGGCGGTCTATGAGCGGCTCCTaGAAGCGCGCGGCCACTCCT | + |
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Preference number: 4 (lower is better) Translates to: PGSARPLLLGQARRRHGRSMSGS*KRAATP Trigger: AGGAGTGGCCGCGCGCTTCCAGGAGCCGCTCATAGA...CCGCCCGTGGCGCCTCCGCGCCTGACCCAGGAGGAGTGGCCGCGCGCTTCCAGG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS-3UTR GCA 90 bp | ACGGCAGGCGGGGTCTATGAGCGGCTCCTGGAAGCGCGCGGCCACTCCTCCTGGCAGGCCAAGGCGGTTTaGTGCGGGGTCCACCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: TAGGVYERLLEARGHSSWQAKAV*CGVHRW Trigger: CCAGCGGTGGACCCCGCAGCAAACCGCCTTGGCCTG...CCAGGAGGAGTGGCCGCGCGCTTCCAGGAGCCGCTCATAGACCCCGCCTGCCGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS-3UTR GCA 90 bp | ACCGGACGGCAGGCGGGGTCTATGAGCGGCTCCTGGAAGCGCGCGGCCACTCCTCGGGGACTCGCCACGTaGTTGTACCACGCGCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: TGRQAGSMSGSWKRAATPRGLAT*LYHAPE Trigger: CTCCGGCGCGTGGTACAAGCACGTGGCGAGTCCCCG...AGGAGTGGCCGCGCGCTTCCAGGAGCCGCTCATAGACCCCGCCTGCCGTCCGGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS-3UTR GCA 90 bp | TTGACCGGACGGCAGGCGGGGTCTATGAGCGGCTCCTGGAAGCGCGCGGCCACTAGGAGCCTCGCGGGCTaGGGGTTCGGGGGAGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: LTGRQAGSMSGSWKRAATRSLAG*GFGGEG Trigger: ACCCTCTCCCCCGAACCCGCAGCCCGCGAGGCTCCT...AGTGGCCGCGCGCTTCCAGGAGCCGCTCATAGACCCCGCCTGCCGTCCGGTCAA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS-3UTR CCA 90 bp | ATTGACCGGACGGCAGGCGGGGTCTATGAGCGGCTCCTGGAAGCGCGCGGCCACTGCGGGGTCCACCGCTaGGCGGGAGACGTCTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: IDRTAGGVYERLLEARGHCGVHR*AGDVSP Trigger: CGGAGAGACGTCTCCCGCCCAGCGGTGGACCCCGCA...GTGGCCGCGCGCTTCCAGGAGCCGCTCATAGACCCCGCCTGCCGTCCGGTCAAT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS-3UTR GCA 90 bp | TTATTGACCGGACGGCAGGCGGGGTCTATGAGCGGCTCCTGGAAGCGCGCGGCCGCCAAGGCGGTTTGCTaGGGGGTCCACCGCTGGGCG | + |
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Preference number: 4 (lower is better) Translates to: LLTGRQAGSMSGSWKRAAAKAVC*GVHRWA Trigger: CGCCCAGCGGTGGACCCCGCAGCAAACCGCCTTGGC...GGCCGCGCGCTTCCAGGAGCCGCTCATAGACCCCGCCTGCCGTCCGGTCAATAA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS-3UTR CCA 90 bp | TTGACCGGACGGCAGGCGGGGTCTATGAGCGGCTCCTGGAAGCGCGCGGCCACTACGAACCGGCTCGGCTaGGTTTGGGCGCGCAGTGGA | + |
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Preference number: 4 (lower is better) Translates to: LTGRQAGSMSGSWKRAATTNRLG*VWARSG Trigger: TCCACTGCGCGCCCAAACCCAGCCGAGCCGGTTCGT...AGTGGCCGCGCGCTTCCAGGAGCCGCTCATAGACCCCGCCTGCCGTCCGGTCAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS-3UTR TCA 90 bp | GCATGCGGGGGCGCAGGAGTCAGGCGGATTTTATTGACCGGACGGCAGGCGGGGGCGCCACAGATAGGGTaGGCGACGCAGCCCCATGAG | + |
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Preference number: 4 (lower is better) Translates to: ACGGAGVRRILLTGRQAGAPQIG*ATQPHE Trigger: CTCATGGGGCTGCGTCGCTCACCCTATCTGTGGCGC...CCCCGCCTGCCGTCCGGTCAATAAAATCCGCCTGACTCCTGCGCCCCCGCATGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS-3UTR GCA 90 bp | GATTTTATTGACCGGACGGCAGGCGGGGTCTATGAGCGGCTCCTGGAAGCGCGCACGGACGGGGATCCCTaGCTGGGAGCTCCTGCGTCG | + |
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Preference number: 4 (lower is better) Translates to: DFIDRTAGGVYERLLEARTDGDP*LGAPAS Trigger: CGACGCAGGAGCTCCCAGGCAGGGATCCCCGTCCGT...GCGCGCTTCCAGGAGCCGCTCATAGACCCCGCCTGCCGTCCGGTCAATAAAATC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS-3UTR CCA 90 bp | GCGGATTTTATTGACCGGACGGCAGGCGGGGTCTATGAGCGGCTCCTGGAAGCGGGCGCGCAGTGGAGTTaGGACGCCCAGGTACCGGAG | + |
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Preference number: 4 (lower is better) Translates to: ADFIDRTAGGVYERLLEAGAQWS*DAQVPE Trigger: CTCCGGTACCTGGGCGTCCCAACTCCACTGCGCGCC...CGCTTCCAGGAGCCGCTCATAGACCCCGCCTGCCGTCCGGTCAATAAAATCCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS-3UTR CCA 90 bp | AGGCGGATTTTATTGACCGGACGGCAGGCGGGGTCTATGAGCGGCTCCTGGAAGACGGGGATCCCTGCCTaGGAGCTCCTGCGTCGCGTC | + |
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Preference number: 4 (lower is better) Translates to: RRILLTGRQAGSMSGSWKTGIPA*ELLRRV Trigger: GACGCGACGCAGGAGCTCCCAGGCAGGGATCCCCGT...CTTCCAGGAGCCGCTCATAGACCCCGCCTGCCGTCCGGTCAATAAAATCCGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS-3UTR CCA 90 bp | CGCATGCGGGGGCGCAGGAGTCAGGCGGATTTTATTGACCGGACGGCAGGCGGGTCTCTCCGAAGTCTCTaGCCAGCTCCGCTGAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: RMRGRRSQADFIDRTAGGSLRSL*PAPLKS Trigger: GGACTTCAGCGGAGCTGGCCAGAGACTTCGGAGAGA...CCCGCCTGCCGTCCGGTCAATAAAATCCGCCTGACTCCTGCGCCCCCGCATGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS-3UTR CCA 90 bp | AGTCAGGCGGATTTTATTGACCGGACGGCAGGCGGGGTCTATGAGCGGCTCCTGCGGCTCGGCTGGGTTTaGGCGCGCAGTGGAGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: SQADFIDRTAGGVYERLLRLGWV*ARSGVG Trigger: CCCAACTCCACTGCGCGCCCAAACCCAGCCGAGCCG...CAGGAGCCGCTCATAGACCCCGCCTGCCGTCCGGTCAATAAAATCCGCCTGACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS-3UTR TCA 90 bp | GATTTTATTGACCGGACGGCAGGCGGGGTCTATGAGCGGCTCCTGGAAGCGCGCTCTGGCCAGCTCCGCTaGAGTCCAGGGACTCCGGTT | + |
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Preference number: 4 (lower is better) Translates to: DFIDRTAGGVYERLLEARSGQLR*SPGTPV Trigger: AACCGGAGTCCCTGGACTTCAGCGGAGCTGGCCAGA...GCGCGCTTCCAGGAGCCGCTCATAGACCCCGCCTGCCGTCCGGTCAATAAAATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS-3UTR CCA 90 bp | GTCAGGCGGATTTTATTGACCGGACGGCAGGCGGGGTCTATGAGCGGCTCCTGGGGTTTGGGCGCGCAGTaGAGTTGGGACGCCCAGGTA | + |
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Preference number: 4 (lower is better) Translates to: VRRILLTGRQAGSMSGSWGLGAQ*SWDAQV Trigger: TACCTGGGCGTCCCAACTCCACTGCGCGCCCAAACC...CCAGGAGCCGCTCATAGACCCCGCCTGCCGTCCGGTCAATAAAATCCGCCTGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS-3UTR TCA 90 bp | ATTTTATTGACCGGACGGCAGGCGGGGTCTATGAGCGGCTCCTGGAAGCGCGCGTCAGGCGGATTTTATTaGCCGGACGGCAGGCGGGGT | + |
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Preference number: 4 (lower is better) Translates to: ILLTGRQAGSMSGSWKRASGGFY*PDGRRG Trigger: ACCCCGCCTGCCGTCCGGTCAATAAAATCCGCCTGA...CGCGCGCTTCCAGGAGCCGCTCATAGACCCCGCCTGCCGTCCGGTCAATAAAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS CCA 90 bp | CGCGTCGACGGCCGCCCGGCGGGGCGGGCCACGAACCGGCTCGGCTaGGTTTGGGCGCGCAGTGGAGTTGGGACGCCCAGGTACCGGAGC | + |
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Preference number: 5 (lower is better) Translates to: RVDGRPAGRATNRLG*VWARSGVGTPRYRS Trigger: GCTCCGGTACCTGGGCGTCCCAACTCCACTGCGCGCCCAAACCCAGCCGAGCCGGTTCGTGGCCCGCCCCGCCGGGCGGCCGTCGACGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS CCA 90 bp | GACGGCCGCCCGGCGGGGCGGGCCACGAACCGGCTCGGCTGGGTTTaGGCGCGCAGTGGAGTTGGGACGCCCAGGTACCGGAGCGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: DGRPAGRATNRLGWV*ARSGVGTPRYRSAG Trigger: TCCTGCGCTCCGGTACCTGGGCGTCCCAACTCCACTGCGCGCCCAAACCCAGCCGAGCCGGTTCGTGGCCCGCCCCGCCGGGCGGCCGTC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS TCA 90 bp | CGCGCAGCGCGCGGCGCCACAGATAGGGTGAGCGACGCAGCCCCATaGGCAGGCCAGCGGCGCGGCCCACCGTGTGGTAGCGGGGACTCG | + |
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Preference number: 5 (lower is better) Translates to: RAARGATDRVSDAAP*AGQRRGPPCGSGDS Trigger: CGAGTCCCCGCTACCACACGGTGGGCCGCGCCGCTGGCCTGCTCATGGGGCTGCGTCGCTCACCCTATCTGTGGCGCCGCGCGCTGCGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS-3UTR CAA 90 bp | ATGAGCGGCTCCTGGAAGCGCGCGGCCACTCCTCCTGGGTCAGGCGCGGAGGCGGGACTCGCCACGTGCTaGTACCACGCGCCGGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: MSGSWKRAATPPGSGAEAGLATC*YHAPEG Trigger: GCCCTCCGGCGCGTGGTACAAGCACGTGGCGAGTCC...CGCCTCCGCGCCTGACCCAGGAGGAGTGGCCGCGCGCTTCCAGGAGCCGCTCAT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS-3UTR CAA 90 bp | GCAGGCGGGGTCTATGAGCGGCTCCTGGAAGCGCGCGGCCACTCCTCCTGGGTCCCGGCTCGGCTGGGTTaGGGCGCGCAGTGGAGTTGG | + |
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Preference number: 5 (lower is better) Translates to: AGGVYERLLEARGHSSWVPARLG*GAQWSW Trigger: CCAACTCCACTGCGCGCCCAAACCCAGCCGAGCCGG...GACCCAGGAGGAGTGGCCGCGCGCTTCCAGGAGCCGCTCATAGACCCCGCCTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS-3UTR CAA 90 bp | GTCTATGAGCGGCTCCTGGAAGCGCGCGGCCACTCCTCCTGGGTCAGGCGCGGAGCAGGCCAAGGCGGTTaGCTGCGGGGTCCACCGCTG | + |
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Preference number: 5 (lower is better) Translates to: VYERLLEARGHSSWVRRGAGQGG*LRGPPL Trigger: CAGCGGTGGACCCCGCAGCAAACCGCCTTGGCCTGC...TCCGCGCCTGACCCAGGAGGAGTGGCCGCGCGCTTCCAGGAGCCGCTCATAGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS GCA 90 bp | TCAGAACGGTCCGGGGGCCAGGCAGGGCAGGCCAAGGCGGTTTGCTaGGGGGTCCACCGCTGGGCGGGAGACGTCTCTCCGAAGTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: SERSGGQAGQAKAVC*GVHRWAGDVSPKSL Trigger: CAGAGACTTCGGAGAGACGTCTCCCGCCCAGCGGTGGACCCCGCAGCAAACCGCCTTGGCCTGCCCTGCCTGGCCCCCGGACCGTTCTGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS TCA 90 bp | TTTCATCTGACAACGCCAGTTCGTGGAGCCCGGCGAGTGTTGACGTaGCACGCGTGGCCCAGAGGAGCCCGGGGCTGGCCGCGTGGCCGC | + |
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Preference number: 5 (lower is better) Translates to: FHLTTPVRGARRVLT*HAWPRGARGWPRGR Trigger: GCGGCCACGCGGCCAGCCCCGGGCTCCTCTGGGCCACGCGTGTCACGTCAACACTCGCCGGGCTCCACGAACTGGCGTTGTCAGATGAAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567649.1 |
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| CDS-3UTR CAA 90 bp | TTGACCGGACGGCAGGCGGGGTCTATGAGCGGCTCCTGGAAGCGCGCGGCCACTGTCAGGCGGATTTTATaGACCGGACGGCAGGCGGGG | + |
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Preference number: 5 (lower is better) Translates to: LTGRQAGSMSGSWKRAATVRRIL*TGRQAG Trigger: CCCCGCCTGCCGTCCGGTCAATAAAATCCGCCTGAC...AGTGGCCGCGCGCTTCCAGGAGCCGCTCATAGACCCCGCCTGCCGTCCGGTCAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS-3UTR CAA 90 bp | AGGCGGATTTTATTGACCGGACGGCAGGCGGGGTCTATGAGCGGCTCCTGGAAGGGGCGCGCAGTGGAGTaGGGACGCCCAGGTACCGGA | + |
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Preference number: 5 (lower is better) Translates to: RRILLTGRQAGSMSGSWKGRAVE*GRPGTG Trigger: TCCGGTACCTGGGCGTCCCAACTCCACTGCGCGCCC...CTTCCAGGAGCCGCTCATAGACCCCGCCTGCCGTCCGGTCAATAAAATCCGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS CCA 90 bp | GATGCAAACCAGTTGTGCCGTGTTTCATCTGACAACGCCAGTTCGTaGAGCCCGGCGAGTGTTGACGTGACACGCGTGGCCCAGAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: DANQLCRVSSDNASS*SPASVDVTRVAQRS Trigger: GCTCCTCTGGGCCACGCGTGTCACGTCAACACTCGCCGGGCTCCACGAACTGGCGTTGTCAGATGAAACACGGCACAACTGGTTTGCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567649.1 |
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| CDS TCA 90 bp | GAACCCACGAGGGCAGCAGGAGAGGAGCCTCGCGGGACTAAGACATaGCCCCTTGTTCATCTGAGATGCAAACCAGTTGTGCCGTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: EPTRAAGEEPRGTKT*PLVHLRCKPVVPCF Trigger: GAAACACGGCACAACTGGTTTGCATCTCAGATGAACAAGGGGTCATGTCTTAGTCCCGCGAGGCTCCTCTCCTGCTGCCCTCGTGGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567649.1 |
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| CDS TCA 72 bp | GGCGGCCGCGCGCAGCGCGCGGCGCCACAGATAGGGTaGGCGACGCAGCCCCATGAGCAGGCCAGCGGCGCG | + |
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Preference number: 6 (lower is better) Translates to: GGRAQRAAPQIG*ATQPHEQASGA Trigger: CGCGCCGCTGGCCTGCTCATGGGGCTGCGTCGCTCACCCTATCTGTGGCGCCGCGCGCTGCGCGCGGCCGCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS CCA 72 bp | GGCCGCCCGGCGGGGCGGGCCACGAACCGGCTCGGCTaGGTTTGGGCGCGCAGTGGAGTTGGGACGCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: GRPAGRATNRLG*VWARSGVGTPR Trigger: CCTGGGCGTCCCAACTCCACTGCGCGCCCAAACCCAGCCGAGCCGGTTCGTGGCCCGCCCCGCCGGGCGGCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS CAA 90 bp | CGACGGCCGCCCGGCGGGGCGGGCCACGAACCGGCTCGGCTGGGTTaGGGCGCGCAGTGGAGTTGGGACGCCCAGGTACCGGAGCGCAGG | + |
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Preference number: 6 (lower is better) Translates to: RRPPGGAGHEPARLG*GAQWSWDAQVPERR Trigger: CCTGCGCTCCGGTACCTGGGCGTCCCAACTCCACTGCGCGCCCAAACCCAGCCGAGCCGGTTCGTGGCCCGCCCCGCCGGGCGGCCGTCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS CCA 72 bp | CCGGCGGGGCGGGCCACGAACCGGCTCGGCTGGGTTTaGGCGCGCAGTGGAGTTGGGACGCCCAGGTACCGG | + |
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Preference number: 6 (lower is better) Translates to: PAGRATNRLGWV*ARSGVGTPRYR Trigger: CCGGTACCTGGGCGTCCCAACTCCACTGCGCGCCCAAACCCAGCCGAGCCGGTTCGTGGCCCGCCCCGCCGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS CAA 72 bp | CCCGGCGGGGCGGGCCACGAACCGGCTCGGCTGGGTTaGGGCGCGCAGTGGAGTTGGGACGCCCAGGTACCG | + |
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Preference number: 6 (lower is better) Translates to: PGGAGHEPARLG*GAQWSWDAQVP Trigger: CGGTACCTGGGCGTCCCAACTCCACTGCGCGCCCAAACCCAGCCGAGCCGGTTCGTGGCCCGCCCCGCCGGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS GCA 72 bp | TCCGGGGGCCAGGCAGGGCAGGCCAAGGCGGTTTGCTaGGGGGTCCACCGCTGGGCGGGAGACGTCTCTCCG | + |
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Preference number: 6 (lower is better) Translates to: SGGQAGQAKAVC*GVHRWAGDVSP Trigger: CGGAGAGACGTCTCCCGCCCAGCGGTGGACCCCGCAGCAAACCGCCTTGGCCTGCCCTGCCTGGCCCCCGGA 75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS CCA 72 bp | GGCCACGAACCGGCTCGGCTGGGTTTGGGCGCGCAGTaGAGTTGGGACGCCCAGGTACCGGAGCGCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: GHEPARLGLGAQ*SWDAQVPERRR Trigger: CCTCCTGCGCTCCGGTACCTGGGCGTCCCAACTCCACTGCGCGCCCAAACCCAGCCGAGCCGGTTCGTGGCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS TCA 72 bp | ACAACGCCAGTTCGTGGAGCCCGGCGAGTGTTGACGTaGCACGCGTGGCCCAGAGGAGCCCGGGGCTGGCCG | + |
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Preference number: 6 (lower is better) Translates to: TTPVRGARRVLT*HAWPRGARGWP Trigger: CGGCCAGCCCCGGGCTCCTCTGGGCCACGCGTGTCACGTCAACACTCGCCGGGCTCCACGAACTGGCGTTGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567649.1 |
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| CDS CCA 72 bp | GGGCAGGCCAAGGCGGTTTGCTGCGGGGTCCACCGCTaGGCGGGAGACGTCTCTCCGAAGTCTCTGGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: GQAKAVCCGVHR*AGDVSPKSLAS Trigger: GCTGGCCAGAGACTTCGGAGAGACGTCTCCCGCCCAGCGGTGGACCCCGCAGCAAACCGCCTTGGCCTGCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566435.4 |
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| CDS TCA 72 bp | GGGAGACGTCTCTCCGAAGTCTCTGGCCAGCTCCGCTaGAGTCCAGGGACTCCGGTTCCAGCGCAGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: GRRLSEVSGQLR*SPGTPVPAQAL Trigger: CAGAGCCTGCGCTGGAACCGGAGTCCCTGGACTTCAGCGGAGCTGGCCAGAGACTTCGGAGAGACGTCTCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566435.4 ENST00000567649.1 |
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| CDS CCA 72 bp | CAGTTGTGCCGTGTTTCATCTGACAACGCCAGTTCGTaGAGCCCGGCGAGTGTTGACGTGACACGCGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: QLCRVSSDNASS*SPASVDVTRVA Trigger: GGCCACGCGTGTCACGTCAACACTCGCCGGGCTCCACGAACTGGCGTTGTCAGATGAAACACGGCACAACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567649.1 |
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