Pregenerated sensors for NPVF (Homo sapiens)
Ensembl gene IDs: ENSG00000105954Ensembl transcript IDs: ENST00000222674.2
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | CACGATAGAAAGGGTGTACAGAAACACGTTTGTAAGTaGTTTTTAATCCTTGTTCACTTATTTGTCAACCAT | + |
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Preference number: 3 (lower is better) Translates to: HDRKGVQKHVCK*FLILVHLFVNH Trigger: ATGGTTGACAAATAAGTGAACAAGGATTAAAAATCACTTACAAACGTGTTTCTGTACACCCTTTCTATCGTG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS-3UTR CCA 90 bp | CTCTTCCGTGTGGTCTTCGCTATAGAGCCATTTGTAGATTACAGGCCACAGCTTATCTCAGAGGCAGGTTaGCTGTTGCTCCAGCACTTC | + |
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Preference number: 4 (lower is better) Translates to: LFRVVFAIEPFVDYRPQLISEAG*LLLQHF Trigger: GAAGTGCTGGAGCAACAGCCAACCTGCCTCTGAGAT...AAGCTGTGGCCTGTAATCTACAAATGGCTCTATAGCGAAGACCACACGGAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS-3UTR CCA 90 bp | CTCTTCCGTGTGGTCTTCGCTATAGAGCCATTTGTAGATTACAGGCCACAGCTTGGATTCTGGATTTCTTaGTGCTGGCAGGTCATGGAG | + |
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Preference number: 4 (lower is better) Translates to: LFRVVFAIEPFVDYRPQLGFWIS*CWQVME Trigger: CTCCATGACCTGCCAGCACCAAGAAATCCAGAATCC...AAGCTGTGGCCTGTAATCTACAAATGGCTCTATAGCGAAGACCACACGGAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS-3UTR TCA 90 bp | CTCTTCCGTGTGGTCTTCGCTATAGAGCCATTTGTAGATTACAGGCCACAGCTTGAATGCATGGATCCTTaGCACAAATCACTCAGCATC | + |
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Preference number: 4 (lower is better) Translates to: LFRVVFAIEPFVDYRPQLECMDP*HKSLSI Trigger: GATGCTGAGTGATTTGTGTCAAGGATCCATGCATTC...AAGCTGTGGCCTGTAATCTACAAATGGCTCTATAGCGAAGACCACACGGAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS-3UTR CCA 90 bp | CTCTTCCGTGTGGTCTTCGCTATAGAGCCATTTGTAGATTACAGGCCACAGCTTATCTCAATGGCAAGTTaGCGAAGGAGTGTGGCATTT | + |
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Preference number: 4 (lower is better) Translates to: LFRVVFAIEPFVDYRPQLISMAS*RRSVAF Trigger: AAATGCCACACTCCTTCGCCAACTTGCCATTGAGAT...AAGCTGTGGCCTGTAATCTACAAATGGCTCTATAGCGAAGACCACACGGAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS-3UTR CCA 90 bp | GATGAAGTGTATGTAGCTACTCTTCCGTGTGGTCTTCGCTATAGAGCCATTTGTGTTCTCCCAAACCTTTaGGGCAGGTTAGGAACACGT | + |
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Preference number: 4 (lower is better) Translates to: DEVYVATLPCGLRYRAICVLPNL*GRLGTR Trigger: ACGTGTTCCTAACCTGCCCCAAAGGTTTGGGAGAAC...ACAAATGGCTCTATAGCGAAGACCACACGGAAGAGTAGCTACATACACTTCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS-3UTR CCA 90 bp | CTCTTCCGTGTGGTCTTCGCTATAGAGCCATTTGTAGATTACAGGCCACAGCTTGGTGCTGGCAGGTCATaGAGTAAAATAAGTCATTGG | + |
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Preference number: 4 (lower is better) Translates to: LFRVVFAIEPFVDYRPQLGAGRS*SKISHW Trigger: CCAATGACTTATTTTACTCCATGACCTGCCAGCACC...AAGCTGTGGCCTGTAATCTACAAATGGCTCTATAGCGAAGACCACACGGAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS-3UTR TCA 90 bp | CTCTTCCGTGTGGTCTTCGCTATAGAGCCATTTGTAGATTACAGGCCACAGCTTAGTGTGGCATTTTATTaGCTGCAGGTGTACTCATCT | + |
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Preference number: 4 (lower is better) Translates to: LFRVVFAIEPFVDYRPQLSVAFY*LQVYSS Trigger: AGATGAGTACACCTGCAGTCAATAAAATGCCACACT...AAGCTGTGGCCTGTAATCTACAAATGGCTCTATAGCGAAGACCACACGGAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS-3UTR TCA 90 bp | CTCTTCCGTGTGGTCTTCGCTATAGAGCCATTTGTAGATTACAGGCCACAGCTTCTCCTTGACTGTTTTTaGTCGGGATTCTGGATTTCT | + |
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Preference number: 4 (lower is better) Translates to: LFRVVFAIEPFVDYRPQLLLDCF*SGFWIS Trigger: AGAAATCCAGAATCCCGATCAAAAACAGTCAAGGAG...AAGCTGTGGCCTGTAATCTACAAATGGCTCTATAGCGAAGACCACACGGAAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS-3UTR GCA 90 bp | GTGTATGTAGCTACTCTTCCGTGTGGTCTTCGCTATAGAGCCATTTGTAGATTAAGGCAGGTTGGCTGTTaGTCCAGCACTTCTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: VYVATLPCGLRYRAICRLRQVGC*SSTSFF Trigger: GAAGAAAGAAGTGCTGGAGCAACAGCCAACCTGCCT...TAATCTACAAATGGCTCTATAGCGAAGACCACACGGAAGAGTAGCTACATACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS-3UTR CCA 90 bp | GATGAAGTGTATGTAGCTACTCTTCCGTGTGGTCTTCGCTATAGAGCCATTTGTGTTGGCGAAGGAGTGTaGCATTTTATTGACTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: DEVYVATLPCGLRYRAICVGEGV*HFIDCR Trigger: CCTGCAGTCAATAAAATGCCACACTCCTTCGCCAAC...ACAAATGGCTCTATAGCGAAGACCACACGGAAGAGTAGCTACATACACTTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS-3UTR CCA 90 bp | GTGTATGTAGCTACTCTTCCGTGTGGTCTTCGCTATAGAGCCATTTGTAGATTACCTCCCAAATCTCAATaGCAAGTTGGCGAAGGAGTG | + |
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Preference number: 4 (lower is better) Translates to: VYVATLPCGLRYRAICRLPPKSQ*QVGEGV Trigger: CACTCCTTCGCCAACTTGCCATTGAGATTTGGGAGG...TAATCTACAAATGGCTCTATAGCGAAGACCACACGGAAGAGTAGCTACATACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS-3UTR TCA 90 bp | GATGAAGTGTATGTAGCTACTCTTCCGTGTGGTCTTCGCTATAGAGCCATTTGTGCACTTCTTTCTTCTTaGACGTTCCTCCCAAATCTC | + |
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Preference number: 4 (lower is better) Translates to: DEVYVATLPCGLRYRAICALLSS*TFLPNL Trigger: GAGATTTGGGAGGAACGTTCAAGAAGAAAGAAGTGC...ACAAATGGCTCTATAGCGAAGACCACACGGAAGAGTAGCTACATACACTTCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS-3UTR CCA 90 bp | GTGTATGTAGCTACTCTTCCGTGTGGTCTTCGCTATAGAGCCATTTGTAGATTAGCTTCTTTCCCCTTTTaGGTATCCTCTAGGCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: VYVATLPCGLRYRAICRLASFPF*VSSRLR Trigger: TCTGAGCCTAGAGGATACCCAAAAGGGGAAAGAAGC...TAATCTACAAATGGCTCTATAGCGAAGACCACACGGAAGAGTAGCTACATACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS-3UTR GCA 90 bp | GTGTATGTAGCTACTCTTCCGTGTGGTCTTCGCTATAGAGCCATTTGTAGATTAAATCACTCAGCATCCTaGAGACACTTTTGGCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: VYVATLPCGLRYRAICRLNHSAS*RHFWLL Trigger: CAACAGCCAAAAGTGTCTGCAGGATGCTGAGTGATT...TAATCTACAAATGGCTCTATAGCGAAGACCACACGGAAGAGTAGCTACATACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS-3UTR CCA 90 bp | GTGTATGTAGCTACTCTTCCGTGTGGTCTTCGCTATAGAGCCATTTGTAGATTATCCTGCAGACACTTTTaGCTGTTGTTGTTCTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: VYVATLPCGLRYRAICRLSCRHF*LLLFSQ Trigger: TTGGGAGAACAACAACAGCCAAAAGTGTCTGCAGGA...TAATCTACAAATGGCTCTATAGCGAAGACCACACGGAAGAGTAGCTACATACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS-3UTR CCA 90 bp | GTGTATGTAGCTACTCTTCCGTGTGGTCTTCGCTATAGAGCCATTTGTAGATTACACATGGTGAATGCATaGATCCTTGACACAAATCAC | + |
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Preference number: 4 (lower is better) Translates to: VYVATLPCGLRYRAICRLHMVNA*ILDTNH Trigger: GTGATTTGTGTCAAGGATCCATGCATTCACCATGTG...TAATCTACAAATGGCTCTATAGCGAAGACCACACGGAAGAGTAGCTACATACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS-3UTR TCA 90 bp | GATGAAGTGTATGTAGCTACTCTTCCGTGTGGTCTTCGCTATAGAGCCATTTGTCATCATCTATTTTCTTaGATAGCAGTCTCCTTGACT | + |
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Preference number: 4 (lower is better) Translates to: DEVYVATLPCGLRYRAICHHLFS*IAVSLT Trigger: AGTCAAGGAGACTGCTATTCAAGAAAATAGATGATG...ACAAATGGCTCTATAGCGAAGACCACACGGAAGAGTAGCTACATACACTTCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS-3UTR CCA 90 bp | GATGAAGTGTATGTAGCTACTCTTCCGTGTGGTCTTCGCTATAGAGCCATTTGTAGTAAAATAAGTCATTaGCACATGGTGAATGCATGG | + |
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Preference number: 4 (lower is better) Translates to: DEVYVATLPCGLRYRAICSKISH*HMVNAW Trigger: CCATGCATTCACCATGTGCCAATGACTTATTTTACT...ACAAATGGCTCTATAGCGAAGACCACACGGAAGAGTAGCTACATACACTTCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS-3UTR TCA 90 bp | TCAAGATACTATTATAGCTGTACTGACAAGGAAAAATTGCCGTTGATGATCCATGTCATTGGCACATGGTaGATGCATGGATCCTTGACA | + |
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Preference number: 4 (lower is better) Translates to: SRYYYSCTDKEKLPLMIHVIGTW*MHGSLT Trigger: TGTCAAGGATCCATGCATTCACCATGTGCCAATGAC...ATGGATCATCAACGGCAATTTTTCCTTGTCAGTACAGCTATAATAGTATCTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS CCA 90 bp | TCACGAGGCTCACCTCCATATTTCTTCCAGATCTCAGAGGCAGGTTaGCTGTTGCTCCAGCACTTCTTTCTTCTTGAACGTTCCTCCCAA | + |
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Preference number: 5 (lower is better) Translates to: SRGSPPYFFQISEAG*LLLQHFFLLERSSQ Trigger: TTGGGAGGAACGTTCAAGAAGAAAGAAGTGCTGGAGCAACAGCCAACCTGCCTCTGAGATCTGGAAGAAATATGGAGGTGAGCCTCGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS CCA 90 bp | AGCATCCTGCAGACACTTTTGGCTGTTGTTGTTCTCCCAAACCTTTaGGGCAGGTTAGGAACACGTCTCACGAGGCTCACCTCCATATTT | + |
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Preference number: 5 (lower is better) Translates to: SILQTLLAVVVLPNL*GRLGTRLTRLTSIF Trigger: AAATATGGAGGTGAGCCTCGTGAGACGTGTTCCTAACCTGCCCCAAAGGTTTGGGAGAACAACAACAGCCAAAAGTGTCTGCAGGATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS GCA 90 bp | GCTCACCTCCATATTTCTTCCAGATCTCAGAGGCAGGTTGGCTGTTaGTCCAGCACTTCTTTCTTCTTGAACGTTCCTCCCAAATCTCAA | + |
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Preference number: 5 (lower is better) Translates to: AHLHISSRSQRQVGC*SSTSFFLNVPPKSQ Trigger: TTGAGATTTGGGAGGAACGTTCAAGAAGAAAGAAGTGCTGGAGCAACAGCCAACCTGCCTCTGAGATCTGGAAGAAATATGGAGGTGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS-3UTR CAA 90 bp | GATGAAGTGTATGTAGCTACTCTTCCGTGTGGTCTTCGCTATAGAGCCATTTGTGAGGCAGGTTGGCTGTaGCTCCAGCACTTCTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: DEVYVATLPCGLRYRAICEAGWL*LQHFFL Trigger: AAGAAAGAAGTGCTGGAGCAACAGCCAACCTGCCTC...ACAAATGGCTCTATAGCGAAGACCACACGGAAGAGTAGCTACATACACTTCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS-3UTR CAA 90 bp | GATGAAGTGTATGTAGCTACTCTTCCGTGTGGTCTTCGCTATAGAGCCATTTGTGGGATTCTGGATTTCTaGGTGCTGGCAGGTCATGGA | + |
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Preference number: 5 (lower is better) Translates to: DEVYVATLPCGLRYRAICGILDF*VLAGHG Trigger: TCCATGACCTGCCAGCACCAAGAAATCCAGAATCCC...ACAAATGGCTCTATAGCGAAGACCACACGGAAGAGTAGCTACATACACTTCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS CCA 90 bp | TGCTCCAGCACTTCTTTCTTCTTGAACGTTCCTCCCAAATCTCAATaGCAAGTTGGCGAAGGAGTGTGGCATTTTATTGACTGCAGGTGT | + |
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Preference number: 5 (lower is better) Translates to: CSSTSFFLNVPPKSQ*QVGEGVWHFIDCRC Trigger: ACACCTGCAGTCAATAAAATGCCACACTCCTTCGCCAACTTGCCATTGAGATTTGGGAGGAACGTTCAAGAAGAAAGAAGTGCTGGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS-3UTR CAA 90 bp | GTGTATGTAGCTACTCTTCCGTGTGGTCTTCGCTATAGAGCCATTTGTAGATTATGTTCTCCCAAACCTTaGGGGCAGGTTAGGAACACG | + |
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Preference number: 5 (lower is better) Translates to: VYVATLPCGLRYRAICRLCSPKP*GQVRNT Trigger: CGTGTTCCTAACCTGCCCCAAAGGTTTGGGAGAACA...TAATCTACAAATGGCTCTATAGCGAAGACCACACGGAAGAGTAGCTACATACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS-3UTR CAA 90 bp | GATGAAGTGTATGTAGCTACTCTTCCGTGTGGTCTTCGCTATAGAGCCATTTGTCACTTTTGGCTGTTGTaGTTCTCCCAAACCTTTGGG | + |
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Preference number: 5 (lower is better) Translates to: DEVYVATLPCGLRYRAICHFWLL*FSQTFG Trigger: CCCAAAGGTTTGGGAGAACAACAACAGCCAAAAGTG...ACAAATGGCTCTATAGCGAAGACCACACGGAAGAGTAGCTACATACACTTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS-3UTR CAA 90 bp | CTCTTCCGTGTGGTCTTCGCTATAGAGCCATTTGTAGATTACAGGCCACAGCTTGCATCATCTATTTTCTaGAATAGCAGTCTCCTTGAC | + |
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Preference number: 5 (lower is better) Translates to: LFRVVFAIEPFVDYRPQLASSIF*NSSLLD Trigger: GTCAAGGAGACTGCTATTCAAGAAAATAGATGATGC...AAGCTGTGGCCTGTAATCTACAAATGGCTCTATAGCGAAGACCACACGGAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS-3UTR CAA 90 bp | GTGTATGTAGCTACTCTTCCGTGTGGTCTTCGCTATAGAGCCATTTGTAGATTAGAGTGTGGCATTTTATaGACTGCAGGTGTACTCATC | + |
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Preference number: 5 (lower is better) Translates to: VYVATLPCGLRYRAICRLECGIL*TAGVLI Trigger: GATGAGTACACCTGCAGTCAATAAAATGCCACACTC...TAATCTACAAATGGCTCTATAGCGAAGACCACACGGAAGAGTAGCTACATACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS-3UTR CAA 90 bp | GATGAAGTGTATGTAGCTACTCTTCCGTGTGGTCTTCGCTATAGAGCCATTTGTAGCACTTCTTTCTTCTaGAACGTTCCTCCCAAATCT | + |
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Preference number: 5 (lower is better) Translates to: DEVYVATLPCGLRYRAICSTSFF*NVPPKS Trigger: AGATTTGGGAGGAACGTTCAAGAAGAAAGAAGTGCT...ACAAATGGCTCTATAGCGAAGACCACACGGAAGAGTAGCTACATACACTTCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS-3UTR CAA 90 bp | GATGAAGTGTATGTAGCTACTCTTCCGTGTGGTCTTCGCTATAGAGCCATTTGTACTGACAAGGAAAAATaGCCGTTGATGATCCATAGC | + |
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Preference number: 5 (lower is better) Translates to: DEVYVATLPCGLRYRAICTDKEK*PLMIHS Trigger: GCTATGGATCATCAACGGCAATTTTTCCTTGTCAGT...ACAAATGGCTCTATAGCGAAGACCACACGGAAGAGTAGCTACATACACTTCATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS CCA 90 bp | TTGAACGTTCCTCCCAAATCTCAATGGCAAGTTGGCGAAGGAGTGTaGCATTTTATTGACTGCAGGTGTACTCATCTTAATAACATTTTT | + |
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Preference number: 5 (lower is better) Translates to: LNVPPKSQWQVGEGV*HFIDCRCTHLNNIF Trigger: AAAAATGTTATTAAGATGAGTACACCTGCAGTCAATAAAATGCCACACTCCTTCGCCAACTTGCCATTGAGATTTGGGAGGAACGTTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS-3UTR CAA 90 bp | TCAAGATACTATTATAGCTGTACTGACAAGGAAAAATTGCCGTTGATGATCCATAATCTCAATGGCAAGTaGGCGAAGGAGTGTGGCATT | + |
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Preference number: 5 (lower is better) Translates to: SRYYYSCTDKEKLPLMIHNLNGK*AKECGI Trigger: AATGCCACACTCCTTCGCCAACTTGCCATTGAGATT...ATGGATCATCAACGGCAATTTTTCCTTGTCAGTACAGCTATAATAGTATCTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS-3UTR CAA 90 bp | TCAAGATACTATTATAGCTGTACTGACAAGGAAAAATTGCCGTTGATGATCCATATCCTGCAGACACTTTaGGCTGTTGTTGTTCTCCCA | + |
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Preference number: 5 (lower is better) Translates to: SRYYYSCTDKEKLPLMIHILQTL*AVVVLP Trigger: TGGGAGAACAACAACAGCCAAAAGTGTCTGCAGGAT...ATGGATCATCAACGGCAATTTTTCCTTGTCAGTACAGCTATAATAGTATCTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS-3UTR CAA 90 bp | TCAAGATACTATTATAGCTGTACTGACAAGGAAAAATTGCCGTTGATGATCCATAGACACTTTTGGCTGTaGTTGTTCTCCCAAACCTTT | + |
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Preference number: 5 (lower is better) Translates to: SRYYYSCTDKEKLPLMIHRHFWL*LFSQTF Trigger: AAAGGTTTGGGAGAACAACAACAGCCAAAAGTGTCT...ATGGATCATCAACGGCAATTTTTCCTTGTCAGTACAGCTATAATAGTATCTTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS CAA 90 bp | CAGCATCCTGCAGACACTTTTGGCTGTTGTTGTTCTCCCAAACCTTaGGGGCAGGTTAGGAACACGTCTCACGAGGCTCACCTCCATATT | + |
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Preference number: 6 (lower is better) Translates to: QHPADTFGCCCSPKP*GQVRNTSHEAHLHI Trigger: AATATGGAGGTGAGCCTCGTGAGACGTGTTCCTAACCTGCCCCAAAGGTTTGGGAGAACAACAACAGCCAAAAGTGTCTGCAGGATGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS CAA 90 bp | AGATCTCAGAGGCAGGTTGGCTGTTGCTCCAGCACTTCTTTCTTCTaGAACGTTCCTCCCAAATCTCAATGGCAAGTTGGCGAAGGAGTG | + |
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Preference number: 6 (lower is better) Translates to: RSQRQVGCCSSTSFF*NVPPKSQWQVGEGV Trigger: CACTCCTTCGCCAACTTGCCATTGAGATTTGGGAGGAACGTTCAAGAAGAAAGAAGTGCTGGAGCAACAGCCAACCTGCCTCTGAGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS CAA 90 bp | GGCTCACCTCCATATTTCTTCCAGATCTCAGAGGCAGGTTGGCTGTaGCTCCAGCACTTCTTTCTTCTTGAACGTTCCTCCCAAATCTCA | + |
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Preference number: 6 (lower is better) Translates to: GSPPYFFQISEAGWL*LQHFFLLERSSQIS Trigger: TGAGATTTGGGAGGAACGTTCAAGAAGAAAGAAGTGCTGGAGCAACAGCCAACCTGCCTCTGAGATCTGGAAGAAATATGGAGGTGAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS CAA 72 bp | CCATATTTCTTCCAGATCTCAGAGGCAGGTTGGCTGTaGCTCCAGCACTTCTTTCTTCTTGAACGTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: PYFFQISEAGWL*LQHFFLLERSS Trigger: GGAGGAACGTTCAAGAAGAAAGAAGTGCTGGAGCAACAGCCAACCTGCCTCTGAGATCTGGAAGAAATATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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| CDS CCA 72 bp | ACTTCTTTCTTCTTGAACGTTCCTCCCAAATCTCAATaGCAAGTTGGCGAAGGAGTGTGGCATTTTATTGAC | + |
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Preference number: 6 (lower is better) Translates to: TSFFLNVPPKSQ*QVGEGVWHFID Trigger: GTCAATAAAATGCCACACTCCTTCGCCAACTTGCCATTGAGATTTGGGAGGAACGTTCAAGAAGAAAGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222674.2 |
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