RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NPTXR (Homo sapiens)

Ensembl gene IDs: ENSG00000221890

Ensembl transcript IDs: ENST00000333039.4

Found 384 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGCAGGCTCCCACTGTTCACTTGAGACGCTCCTCCCCACTCAGGTaGGGACAGGGGACACACTCGCAGGGCAGGGCATTCTGGAGGTGT +
Preference number: 1 (lower is better)
Translates to: GQAPTVHLRRSSPLR*GQGTHSQGRAFWRC
Trigger: ACACCTCCAGAATGCCCTGCCCTGCGAGTGTGTCCCCTGTCCCCACCTGAGTGGGGAGGAGCGTCTCAAGTGAACAGTGGGAGCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 90 bp GCTGAATGCAGTCAGAAGGCTGGGCTCAAGTCTCCCGTGTCCAGCTaGGTGGCCTTGAGGGTCGCTCCCCTCCCCGGGCTTCAGCTTCCT +
Preference number: 1 (lower is better)
Translates to: AECSQKAGLKSPVSS*VALRVAPLPGLQLP
Trigger: AGGAAGCTGAAGCCCGGGGAGGGGAGCGACCCTCAAGGCCACCCAGCTGGACACGGGAGACTTGAGCCCAGCCTTCTGACTGCATTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR GCA 90 bp GACTCAGTGCTGGGGAGAGGCTGCTGCGTCCTAGAGAGGGCTGAATaGAGTCAGAAGGCTGGGCTCAAGTCTCCCGTGTCCAGCTGGGTG +
Preference number: 1 (lower is better)
Translates to: DSVLGRGCCVLERAE*SQKAGLKSPVSSWV
Trigger: CACCCAGCTGGACACGGGAGACTTGAGCCCAGCCTTCTGACTGCATTCAGCCCTCTCTAGGACGCAGCAGCCTCTCCCCAGCACTGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 90 bp TGGCCCACCCCCTGCCTCTGTTCCTTCACTTCAAGCCCTGTGGGCTaGGAAAGGGGTCGGAACACGTCTGGAGCAATGGTGCCCAGATGG +
Preference number: 1 (lower is better)
Translates to: WPTPCLCSFTSSPVG*ERGRNTSGAMVPRW
Trigger: CCATCTGGGCACCATTGCTCCAGACGTGTTCCGACCCCTTTCCCAGCCCACAGGGCTTGAAGTGAAGGAACAGAGGCAGGGGGTGGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR GCA 90 bp GAGTCTCTGCTGACCCTAACCCATGACTGGCTGCATCCCATCCACTaGCGAGTCCTGGGATCTACCCCTGCGAAGCCCAGGGTCACCAGA +
Preference number: 1 (lower is better)
Translates to: ESLLTLTHDWLHPIH*RVLGSTPAKPRVTR
Trigger: TCTGGTGACCCTGGGCTTCGCAGGGGTAGATCCCAGGACTCGGCAGTGGATGGGATGCAGCCAGTCATGGGTTAGGGTCAGCAGAGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 90 bp TCACTATGGGTGAGCACAAGGGGTGACTGCAGCCCTTTGGCCTCCTaGGGTCTTTGTCCCCTTCCCTCCAGGCTGGAGCTGGGAAAGGAA +
Preference number: 1 (lower is better)
Translates to: SLWVSTRGDCSPLAS*GLCPLPSRLELGKE
Trigger: TTCCTTTCCCAGCTCCAGCCTGGAGGGAAGGGGACAAAGACCCCAGGAGGCCAAAGGGCTGCAGTCACCCCTTGTGCTCACCCATAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 90 bp GGCTGGGAAAGGGGTCGGAACACGTCTGGAGCAATGGTGCCCAGATaGCACTCTACACAGGTGAGTGGGAACTCAGCCCCTGGACGTAAC +
Preference number: 1 (lower is better)
Translates to: GWERGRNTSGAMVPR*HSTQVSGNSAPGRN
Trigger: GTTACGTCCAGGGGCTGAGTTCCCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGACCCCTTTCCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR TCA 90 bp GCATGGAGGGAGAGCGATGACTATACCAGTGGCCATCACTATGGGTaGGCACAAGGGGTGACTGCAGCCCTTTGGCCTCCTGGGGTCTTT +
Preference number: 1 (lower is better)
Translates to: AWRESDDYTSGHHYG*AQGVTAALWPPGVF
Trigger: AAAGACCCCAGGAGGCCAAAGGGCTGCAGTCACCCCTTGTGCTCACCCATAGTGATGGCCACTGGTATAGTCATCGCTCTCCCTCCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR GCA 90 bp GCCCTGAGCTCTAGTCCTGGCTCTGCCCCATGCTCTGTGATCCTGTaGAGGTCACGTGTCCTCCCTGAACTCTTCCCCATTTCTCACAAG +
Preference number: 1 (lower is better)
Translates to: ALSSSPGSAPCSVIL*RSRVLPELFPISHK
Trigger: CTTGTGAGAAATGGGGAAGAGTTCAGGGAGGACACGTGACCTGCACAGGATCACAGAGCATGGGGCAGAGCCAGGACTAGAGCTCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 90 bp CACTCAGTGCAGTGCCAGATGGCAGGACAAACACGGGCTCCATCGTaGTTATCAGCCAGGAGCAGCTCAGGATGTGACTGGGCCATGTCT +
Preference number: 1 (lower is better)
Translates to: HSVQCQMAGQTRAPS*LSARSSSGCDWAMS
Trigger: AGACATGGCCCAGTCACATCCTGAGCTGCTCCTGGCTGATAACCACGATGGAGCCCGTGTTTGTCCTGCCATCTGGCACTGCACTGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 90 bp AGATCAACAGGACGGTGCCTGTGCCACACTCAGTGCAGTGCCAGATaGCAGGACAAACACGGGCTCCATCGTGGTTATCAGCCAGGAGCA +
Preference number: 1 (lower is better)
Translates to: RSTGRCLCHTQCSAR*QDKHGLHRGYQPGA
Trigger: TGCTCCTGGCTGATAACCACGATGGAGCCCGTGTTTGTCCTGCCATCTGGCACTGCACTGAGTGTGGCACAGGCACCGTCCTGTTGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 90 bp CTTCACTTCAAGCCCTGTGGGCTGGGAAAGGGGTCGGAACACGTCTaGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGGAA +
Preference number: 1 (lower is better)
Translates to: LHFKPCGLGKGSEHV*SNGAQMALYTGEWE
Trigger: TTCCCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGACCCCTTTCCCAGCCCACAGGGCTTGAAGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 90 bp GGGGCACCACATGCCACAAGATGGGAAGATCTGGCAGATAACAGCTaGGAAGCAACTGGTGCAGGGCTTGGCCCCAAGCAAGAGTTGGAG +
Preference number: 1 (lower is better)
Translates to: GAPHATRWEDLADNS*EATGAGLGPKQELE
Trigger: CTCCAACTCTTGCTTGGGGCCAAGCCCTGCACCAGTTGCTTCCCAGCTGTTATCTGCCAGATCTTCCCATCTTGTGGCATGTGGTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR TCA 90 bp CCACCTGGAATCACAGAGAAGCTCACACCCAATCTGGAGAGCAAATaGCCAAAGCGAGGGCCTCAGCTCACGAATGAGGAAGGCCAGGCC +
Preference number: 1 (lower is better)
Translates to: PPGITEKLTPNLESK*PKRGPQLTNEEGQA
Trigger: GGCCTGGCCTTCCTCATTCGTGAGCTGAGGCCCTCGCTTTGGTCATTTGCTCTCCAGATTGGGTGTGAGCTTCTCTGTGATTCCAGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR GCA 90 bp TGTTGTGAGATCAACAGGACGGTGCCTGTGCCACACTCAGTGCAGTaGCAGATGGCAGGACAAACACGGGCTCCATCGTGGTTATCAGCC +
Preference number: 1 (lower is better)
Translates to: CCEINRTVPVPHSVQ*QMAGQTRAPSWLSA
Trigger: GGCTGATAACCACGATGGAGCCCGTGTTTGTCCTGCCATCTGGCACTGCACTGAGTGTGGCACAGGCACCGTCCTGTTGATCTCACAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR TCA 90 bp GTCTTTGGCTGTTACCGTGGCAACCTAGGTCTCAGCAGGTCTGGCTaGAGCCCGCCATTGCCTTTTCTTCCAGTGGGATTGTACTGGAGG +
Preference number: 1 (lower is better)
Translates to: VFGCYRGNLGLSRSG*SPPLPFLPVGLYWR
Trigger: CCTCCAGTACAATCCCACTGGAAGAAAAGGCAATGGCGGGCTTCAGCCAGACCTGCTGAGACCTAGGTTGCCACGGTAACAGCCAAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR TCA 90 bp GGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTaGGTGGGAACTCAGCCCCTGGACGTAACCCCCTTTGGTTTGAAA +
Preference number: 1 (lower is better)
Translates to: GTRLEQWCPDGTLHR*VGTQPLDVTPFGLK
Trigger: TTTCAAACCAAAGGGGGTTACGTCCAGGGGCTGAGTTCCCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 90 bp CCCTGCGAAGCCCAGGGTCACCAGAGCTTTCCCCACATATCCACCTaGAATCACAGAGAAGCTCACACCCAATCTGGAGAGCAAATGACC +
Preference number: 1 (lower is better)
Translates to: PCEAQGHQSFPHIST*NHREAHTQSGEQMT
Trigger: GGTCATTTGCTCTCCAGATTGGGTGTGAGCTTCTCTGTGATTCCAGGTGGATATGTGGGGAAAGCTCTGGTGACCCTGGGCTTCGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 90 bp CGGGACCCAAACAGTGGTGCTGGGGAAATTTGTTCCTGTTCCCTTTaGAAGGCTGAGTGGGTGATGCAGCACAGGAACAAGGCTTGGACG +
Preference number: 1 (lower is better)
Translates to: RDPNSGAGEICSCSL*KAEWVMQHRNKAWT
Trigger: CGTCCAAGCCTTGTTCCTGTGCTGCATCACCCACTCAGCCTTCCAAAGGGAACAGGAACAAATTTCCCCAGCACCACTGTTTGGGTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 90 bp CAGGATGTGACTGGGCCATGTCTGACTCCTCTTTCCCTGTCTGCTTaGATGTGCTCAGGGGCAGCAGAAGATAGGAAAAGCGGGACCCAA +
Preference number: 1 (lower is better)
Translates to: QDVTGPCLTPLSLSA*MCSGAAEDRKSGTQ
Trigger: TTGGGTCCCGCTTTTCCTATCTTCTGCTGCCCCTGAGCACATCCAAGCAGACAGGGAAAGAGGAGTCAGACATGGCCCAGTCACATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR GCA 90 bp TCAGGGAGTGGAGATAGGGAACAAAAAGGCAGGCAAAAGGTACAGTaGCCACTTGAGCCAGGGAGCATGCAGCTGCTCAGACACCTGGTA +
Preference number: 1 (lower is better)
Translates to: SGSGDREQKGRQKVQ*PLEPGSMQLLRHLV
Trigger: TACCAGGTGTCTGAGCAGCTGCATGCTCCCTGGCTCAAGTGGGCACTGTACCTTTTGCCTGCCTTTTTGTTCCCTATCTCCACTCCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR GCA 90 bp AACTGTGTTGTGAGATCAACAGGACGGTGCCTGTGCCACACTCAGTaGAGTGCCAGATGGCAGGACAAACACGGGCTCCATCGTGGTTAT +
Preference number: 1 (lower is better)
Translates to: NCVVRSTGRCLCHTQ*SARWQDKHGLHRGY
Trigger: ATAACCACGATGGAGCCCGTGTTTGTCCTGCCATCTGGCACTGCACTGAGTGTGGCACAGGCACCGTCCTGTTGATCTCACAACACAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR TCA 90 bp GGAAAGCATCTGACCTCGCGGATGTCTACCTGCTTAGGTGTAGACTaGACTCAAAGGTCTTCAGGGGCAGGCAACATGGAGGGGGAAGAA +
Preference number: 1 (lower is better)
Translates to: GKHLTSRMSTCLGVD*TQRSSGAGNMEGEE
Trigger: TTCTTCCCCCTCCATGTTGCCTGCCCCTGAAGACCTTTGAGTTCAGTCTACACCTAAGCAGGTAGACATCCGCGAGGTCAGATGCTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 90 bp TCCCCACATATCCACCTGGAATCACAGAGAAGCTCACACCCAATCTaGAGAGCAAATGACCAAAGCGAGGGCCTCAGCTCACGAATGAGG +
Preference number: 1 (lower is better)
Translates to: SPHIHLESQRSSHPI*RANDQSEGLSSRMR
Trigger: CCTCATTCGTGAGCTGAGGCCCTCGCTTTGGTCATTTGCTCTCCAGATTGGGTGTGAGCTTCTCTGTGATTCCAGGTGGATATGTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 90 bp GGGGCTGGGCAATCTATTTATGTTCTCGAAATGGAAAGCAGGATCTaGGCGCGGGAGGCAATGCAACTTGGAGTAGCTTCCATGGCACTG +
Preference number: 1 (lower is better)
Translates to: GAGQSIYVLEMESRI*AREAMQLGVASMAL
Trigger: CAGTGCCATGGAAGCTACTCCAAGTTGCATTGCCTCCCGCGCCCAGATCCTGCTTTCCATTTCGAGAACATAAATAGATTGCCCAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR TCA 90 bp GTGCTGGGGAAATTTGTTCCTGTTCCCTTTGGAAGGCTGAGTGGGTaGTGCAGCACAGGAACAAGGCTTGGACGTCAGAGGTCTCATCTT +
Preference number: 1 (lower is better)
Translates to: VLGKFVPVPFGRLSG*CSTGTRLGRQRSHL
Trigger: AAGATGAGACCTCTGACGTCCAAGCCTTGTTCCTGTGCTGCATCACCCACTCAGCCTTCCAAAGGGAACAGGAACAAATTTCCCCAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR TCA 90 bp AAACAGTGGTGCTGGGGAAATTTGTTCCTGTTCCCTTTGGAAGGCTaGGTGGGTGATGCAGCACAGGAACAAGGCTTGGACGTCAGAGGT +
Preference number: 1 (lower is better)
Translates to: KQWCWGNLFLFPLEG*VGDAAQEQGLDVRG
Trigger: ACCTCTGACGTCCAAGCCTTGTTCCTGTGCTGCATCACCCACTCAGCCTTCCAAAGGGAACAGGAACAAATTTCCCCAGCACCACTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR TCA 90 bp ACCCCCTTTGGTTTGAAATCTGGGCTCCATCACTTGCTAGCTGATTaGCACCAGGCAGATGACATCACCTCTCTGTGCCCCAGTTTCCTC +
Preference number: 1 (lower is better)
Translates to: TPFGLKSGLHHLLAD*HQADDITSLCPSFL
Trigger: GAGGAAACTGGGGCACAGAGAGGTGATGTCATCTGCCTGGTGTCAATCAGCTAGCAAGTGATGGAGCCCAGATTTCAAACCAAAGGGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 90 bp AGCCCGCCATTGCCTTTTCTTCCAGTGGGATTGTACTGGAGGGGCTaGGCAATCTATTTATGTTCTCGAAATGGAAAGCAGGATCTGGGC +
Preference number: 1 (lower is better)
Translates to: SPPLPFLPVGLYWRG*AIYLCSRNGKQDLG
Trigger: GCCCAGATCCTGCTTTCCATTTCGAGAACATAAATAGATTGCCCAGCCCCTCCAGTACAATCCCACTGGAAGAAAAGGCAATGGCGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 90 bp AAGATGTTTGGGTGTTGCATAAAGGAAGATGTTCAGGTGTCATGTTaGAAAGCATCTGACCTCGCGGATGTCTACCTGCTTAGGTGTAGA +
Preference number: 1 (lower is better)
Translates to: KMFGCCIKEDVQVSC*KASDLADVYLLRCR
Trigger: TCTACACCTAAGCAGGTAGACATCCGCGAGGTCAGATGCTTTCCAACATGACACCTGAACATCTTCCTTTATGCAACACCCAAACATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR TCA 90 bp AATAACAGAAACACATCAAGCTTGGCGTCACTGAAATTGAAGTTCTaGATTCTGCCGTCACCCCAGCAACAGTGCCAGTATGATGAGACA +
Preference number: 1 (lower is better)
Translates to: NNRNTSSLASLKLKF*ILPSPQQQCQYDET
Trigger: TGTCTCATCATACTGGCACTGTTGCTGGGGTGACGGCAGAATTCAGAACTTCAATTTCAGTGACGCCAAGCTTGATGTGTTTCTGTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR TCA 90 bp GTGACTAGCAGGGGAGGGACACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGGGTGAGCACAAGGGGTaGCTGCAGCCCTTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: VTSRGGTPQLSILPKRPGGEHKG*LQPFGL
Trigger: GAGGCCAAAGGGCTGCAGTCACCCCTTGTGCTCACC...CCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGTGTCCCTCCCCTGCTAGTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CCA 90 bp AGCAGGGGAGGGACACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGATCATAACTGGGCCTGTTGCATaGGGGACAAGGGGGCGGGCG +
Preference number: 2 (lower is better)
Translates to: SRGGTPQLSILPKRPGIITGPVA*GTRGRA
Trigger: CGCCCGCCCCCTTGTCCCCCATGCAACAGGCCCAGT...TATGATCCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGTGTCCCTCCCCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR TCA 90 bp TCTACAGCCTGTTGTGGCCCTGAAGGGGAAGCCACTGGGCCTGTTGCATGGGGGAGTGCGTGGGCAGGCTaGGGAGGGAATATGACCCCC +
Preference number: 2 (lower is better)
Translates to: STACCGPEGEATGPVAWGSAWAG*GGNMTP
Trigger: GGGGGTCATATTCCCTCCTCAGCCTGCCCACGCACT...CCCCCATGCAACAGGCCCAGTGGCTTCCCCTTCAGGGCCACAACAGGCTGTAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR TCA 90 bp ACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGATCATAACCTCCTCCCCGCAAGCCTGTTGTGGCCCTaGAGGGGAAGCCACTGGGCC +
Preference number: 2 (lower is better)
Translates to: TSALHSAEAPRDHNLLPASLLWP*RGSHWA
Trigger: GGCCCAGTGGCTTCCCCTTCAGGGCCACAACAGGCT...TGCGGGGAGGAGGTTATGATCCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR TCA 90 bp GTGACTAGCAGGGGAGGGACACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGGGGAGTCAGATGCCCTaGGCTCTAGTCCTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: VTSRGGTPQLSILPKRPGGSQMP*ALVLAL
Trigger: CAGAGCCAGGACTAGAGCTCAGGGCATCTGACTCCC...CCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGTGTCCCTCCCCTGCTAGTCAC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CCA 90 bp CAGAGGTGGGGTCTCCTGGGCCATGAGGCCTCTACCTTAGGGCTGCTCCCAGCCGGGCTGGGCCAGGCATaGAACCAACATTCAAACCGC +
Preference number: 2 (lower is better)
Translates to: QRWGLLGHEASTLGLLPAGLGQA*NQHSNR
Trigger: GCGGTTTGAATGTTGGTTCCATGCCTGGCCCAGCCC...GGCTGGGAGCAGCCCTAAGGTAGAGGCCTCATGGCCCAGGAGACCCCACCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR GCA 90 bp AGGGGTCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGCCACTGGGCCTGTTaGATGGGGGACAAGGGGGCG +
Preference number: 2 (lower is better)
Translates to: RGRNTSGAMVPRWHSTQVSHWAC*MGDKGA
Trigger: CGCCCCCTTGTCCCCCATGCAACAGGCCCAGTGGCT...CACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGACCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CCA 90 bp ACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGATCATAACCTCCTCCCCGCACTCAAGTCCCCAAAGTaGCAGGCAAGGGAGGGGCCC +
Preference number: 2 (lower is better)
Translates to: TSALHSAEAPRDHNLLPALKSPK*QAREGP
Trigger: GGGCCCCTCCCTTGCCTGCCACTTTGGGGACTTGAG...TGCGGGGAGGAGGTTATGATCCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CCA 90 bp TCTACAGCCTGTTGTGGCCCTGAAGGGGAAGCCACTGGGCCTGTTGCATGGGGGCAGTGCAGTGCCAGGTaGGCAGGCTCCCACTGTTCA +
Preference number: 2 (lower is better)
Translates to: STACCGPEGEATGPVAWGQCSAR*AGSHCS
Trigger: TGAACAGTGGGAGCCTGCCCACCTGGCACTGCACTG...CCCCCATGCAACAGGCCCAGTGGCTTCCCCTTCAGGGCCACAACAGGCTGTAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CCA 90 bp GTGACTAGCAGGGGAGGGACACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGCCTCCAGGCTGGAGCTaGGAAAGGAATGTCCTGGAG +
Preference number: 2 (lower is better)
Translates to: VTSRGGTPQLSILPKRPGPPGWS*ERNVLE
Trigger: CTCCAGGACATTCCTTTCCCAGCTCCAGCCTGGAGG...CCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGTGTCCCTCCCCTGCTAGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR TCA 90 bp CCCACCCCCTGCCTCTGTTCCTTCACTTCAAGCCCTGTGGGCTGGGAAAGGGGTGGTGCCAGGCTGGGTTaGTCCAAAGGGAGCTGGTTT +
Preference number: 2 (lower is better)
Translates to: PTPCLCSFTSSPVGWERGGARLG*SKGSWF
Trigger: AAACCAGCTCCCTTTGGATCAACCCAGCCTGGCACC...ACCCCTTTCCCAGCCCACAGGGCTTGAAGTGAAGGAACAGAGGCAGGGGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR GCA 90 bp CCCACCCCCTGCCTCTGTTCCTTCACTTCAAGCCCTGTGGGCTGGGAAAGGGGTCTGCATCCCATCCACTaGCGAGTCCTGGGATCTACC +
Preference number: 2 (lower is better)
Translates to: PTPCLCSFTSSPVGWERGLHPIH*RVLGST
Trigger: GGTAGATCCCAGGACTCGGCAGTGGATGGGATGCAG...ACCCCTTTCCCAGCCCACAGGGCTTGAAGTGAAGGAACAGAGGCAGGGGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CCA 90 bp AGGGGTCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGTCCTCCCCACTCAGGTaGGGACAGGGGACACACTCG +
Preference number: 2 (lower is better)
Translates to: RGRNTSGAMVPRWHSTQVSSPLR*GQGTHS
Trigger: CGAGTGTGTCCCCTGTCCCCACCTGAGTGGGGAGGA...CACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR TCA 90 bp ACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGGAACTCAGCTCCCAGCCCAGGCTaGAGCGGTCCAAGTCCTGTC +
Preference number: 2 (lower is better)
Translates to: TSGAMVPRWHSTQVSGNSAPSPG*SGPSPV
Trigger: GACAGGACTTGGACCGCTTCAGCCTGGGCTGGGAGC...TGAGTTCCCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR TCA 90 bp ACTGGTGCAGGGCTTGGCCCCAAGCAAGAGTTGGAGAAGCAGCAATTTCCCTCCGGGTCTCCTGGGCCATaGGGCCTCTACCTTAGGGCT +
Preference number: 2 (lower is better)
Translates to: TGAGLGPKQELEKQQFPSGSPGP*GLYLRA
Trigger: AGCCCTAAGGTAGAGGCCTCATGGCCCAGGAGACCC...GGAGGGAAATTGCTGCTTCTCCAACTCTTGCTTGGGGCCAAGCCCTGCACCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR TCA 90 bp CCCACCCCCTGCCTCTGTTCCTTCACTTCAAGCCCTGTGGGCTGGGAAAGGGGTGTGTGTGGGCTCAAGTaGCCATGCAAGTGCTGTCAC +
Preference number: 2 (lower is better)
Translates to: PTPCLCSFTSSPVGWERGVCGLK*PCKCCH
Trigger: GTGACAGCACTTGCATGGTCACTTGAGCCCACACAC...ACCCCTTTCCCAGCCCACAGGGCTTGAAGTGAAGGAACAGAGGCAGGGGGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR GCA 90 bp ACTGGTGCAGGGCTTGGCCCCAAGCAAGAGTTGGAGAAGCAGCAATTTCCCTCCCCTGGGATCTACCCCTaGGAAGCCCAGGGTCACCAG +
Preference number: 2 (lower is better)
Translates to: TGAGLGPKQELEKQQFPSPGIYP*EAQGHQ
Trigger: CTGGTGACCCTGGGCTTCGCAGGGGTAGATCCCAGG...GGAGGGAAATTGCTGCTTCTCCAACTCTTGCTTGGGGCCAAGCCCTGCACCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CCA 90 bp AGCAGGGGAGGGACACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGATCATAACAGGTGAGGGGAAATaGGAGGCACAGCCAGGAGTG +
Preference number: 2 (lower is better)
Translates to: SRGGTPQLSILPKRPGIITGEGK*EAQPGV
Trigger: CACTCCTGGCTGTGCCTCCCATTTCCCCTCACCTGT...TATGATCCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGTGTCCCTCCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CCA 90 bp AGGGGTCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGCCCTTGACTGGCAGCTaGTGGAAAGAGGGAGGAGGG +
Preference number: 2 (lower is better)
Translates to: RGRNTSGAMVPRWHSTQVPLTGS*WKEGGG
Trigger: CCCTCCTCCCTCTTTCCACCAGCTGCCAGTCAAGGG...CACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CCA 90 bp ACTGGTGCAGGGCTTGGCCCCAAGCAAGAGTTGGAGAAGCAGCAATTTCCCTCCTGGCTCTGCCAGAGGTaGGGTCTCCTGGGCCATGAG +
Preference number: 2 (lower is better)
Translates to: TGAGLGPKQELEKQQFPSWLCQR*GLLGHE
Trigger: CTCATGGCCCAGGAGACCCCACCTCTGGCAGAGCCA...GGAGGGAAATTGCTGCTTCTCCAACTCTTGCTTGGGGCCAAGCCCTGCACCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR TCA 90 bp CCCACCCCCTGCCTCTGTTCCTTCACTTCAAGCCCTGTGGGCTGGGAAAGGGGTAAGCCATCAGCCCTTTaGGACACTCTCAGACAGGCA +
Preference number: 2 (lower is better)
Translates to: PTPCLCSFTSSPVGWERGKPSAL*DTLRQA
Trigger: TGCCTGTCTGAGAGTGTCTCAAAGGGCTGATGGCTT...ACCCCTTTCCCAGCCCACAGGGCTTGAAGTGAAGGAACAGAGGCAGGGGGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CCA 90 bp TGGTGGGGGCACCACATGCCACAAGATGGGAAGATCTGGCAGATAACAGCTGGGAGACTGAGGTGGGGCTaGGCCAGGCATGGAACCAAC +
Preference number: 2 (lower is better)
Translates to: WWGHHMPQDGKIWQITAGRLRWG*ARHGTN
Trigger: GTTGGTTCCATGCCTGGCCCAGCCCCACCTCAGTCT...CCCAGCTGTTATCTGCCAGATCTTCCCATCTTGTGGCATGTGGTGCCCCCACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CCA 90 bp AGGGGTCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGGGGAAAGGAATGTCCTaGAGACTGAGGTGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: RGRNTSGAMVPRWHSTQVGKGMS*RLRWGW
Trigger: CCAGCCCCACCTCAGTCTCCAGGACATTCCTTTCCC...CACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CAA 90 bp TTAGGGCTGCTCCCAGCCCAGGCTGAAGCGGTCCAAGTCCTGTCCTaGGCATGGAGGGAGAGCGATGACTATACCAGTGGCCATCACTAT +
Preference number: 2 (lower is better)
Translates to: LGLLPAQAEAVQVLS*AWRESDDYTSGHHY
Trigger: ATAGTGATGGCCACTGGTATAGTCATCGCTCTCCCTCCATGCCAAGGACAGGACTTGGACCGCTTCAGCCTGGGCTGGGAGCAGCCCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR TCA 90 bp ACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGATCATAACCTCCTCCCCGCACTGACTTCGAACTCCTaGCCTCAAGTGATCTGCCTG +
Preference number: 2 (lower is better)
Translates to: TSALHSAEAPRDHNLLPALTSNS*PQVICL
Trigger: CAGGCAGATCACTTGAGGTCAGGAGTTCGAAGTCAG...TGCGGGGAGGAGGTTATGATCCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR TCA 90 bp TCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGGGAAGGCTGAGTGGGTaGTGCAGCACAGGAACAAGG +
Preference number: 2 (lower is better)
Translates to: SEHVWSNGAQMALYTGEWGRLSG*CSTGTR
Trigger: CCTTGTTCCTGTGCTGCATCACCCACTCAGCCTTCC...CCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR TCA 90 bp AGATCAACAGGACGGTGCCTGTGCCACACTCAGTGCAGTGCCAGATGGCAGGACTTCCCTTTGGAAGGCTaGGTGGGTGATGCAGCACAG +
Preference number: 2 (lower is better)
Translates to: RSTGRCLCHTQCSARWQDFPLEG*VGDAAQ
Trigger: CTGTGCTGCATCACCCACTCAGCCTTCCAAAGGGAA...GTCCTGCCATCTGGCACTGCACTGAGTGTGGCACAGGCACCGTCCTGTTGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR TCA 90 bp AGGGGTCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGTTGACACCAGGCAGATaGCATCACCTCTCTGTGCCC +
Preference number: 2 (lower is better)
Translates to: RGRNTSGAMVPRWHSTQVLTPGR*HHLSVP
Trigger: GGGCACAGAGAGGTGATGTCATCTGCCTGGTGTCAA...CACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR GCA 90 bp ACTGGTGCAGGGCTTGGCCCCAAGCAAGAGTTGGAGAAGCAGCAATTTCCCTCCAAGAGACAACTCCAGTaGAGTGCCAGGTGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: TGAGLGPKQELEKQQFPSKRQLQ*SARWAG
Trigger: GCCTGCCCACCTGGCACTGCACTGGAGTTGTCTCTT...GGAGGGAAATTGCTGCTTCTCCAACTCTTGCTTGGGGCCAAGCCCTGCACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR GCA 90 bp CCCACCCCCTGCCTCTGTTCCTTCACTTCAAGCCCTGTGGGCTGGGAAAGGGGTTCTCACCCAGTGCTCTaGTCACTGCTTCATGCTTCT +
Preference number: 2 (lower is better)
Translates to: PTPCLCSFTSSPVGWERGSHPVL*SLLHAS
Trigger: AGAAGCATGAAGCAGTGAGCAGAGCACTGGGTGAGA...ACCCCTTTCCCAGCCCACAGGGCTTGAAGTGAAGGAACAGAGGCAGGGGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR GCA 90 bp AGGGGTCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGCCGGCCTGCAGCTCTTaGATCATGTCTCAGGCTAAG +
Preference number: 2 (lower is better)
Translates to: RGRNTSGAMVPRWHSTQVPACSS*IMSQAK
Trigger: CTTAGCCTGAGACATGATGCAAGAGCTGCAGGCCGG...CACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CCA 90 bp ATGTGCTCAGGGGCAGCAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGCCCACTGCCCTTGACTaGCAGCTGGTGGAAAGAGGG +
Preference number: 2 (lower is better)
Translates to: MCSGAAEDRKSGTQTVVLPTALD*QLVERG
Trigger: CCCTCTTTCCACCAGCTGCCAGTCAAGGGCAGTGGG...CAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTGCTGCCCCTGAGCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CCA 90 bp ATGTGCTCAGGGGCAGCAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGAGGTCTCAGCAGGTCTaGCTGAAGCCCGCCATTGCC +
Preference number: 2 (lower is better)
Translates to: MCSGAAEDRKSGTQTVVLRSQQV*LKPAIA
Trigger: GGCAATGGCGGGCTTCAGCCAGACCTGCTGAGACCT...CAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTGCTGCCCCTGAGCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CCA 90 bp TCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGACACGGGCTCCATCGTaGTTATCAGCCAGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: SEHVWSNGAQMALYTGEWTRAPS*LSARSS
Trigger: GCTGCTCCTGGCTGATAACCACGATGGAGCCCGTGT...CCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR TCA 90 bp ACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGGAACTCACTCCCACTGTTCACTTaGGACGCTCCTCCCCACTCA +
Preference number: 2 (lower is better)
Translates to: TSGAMVPRWHSTQVSGNSLPLFT*DAPPHS
Trigger: TGAGTGGGGAGGAGCGTCTCAAGTGAACAGTGGGAG...TGAGTTCCCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR TCA 90 bp CCCACCCCCTGCCTCTGTTCCTTCACTTCAAGCCCTGTGGGCTGGGAAAGGGGTTGCTTAGGTGTAGACTaGACTCAAAGGTCTTCAGGG +
Preference number: 2 (lower is better)
Translates to: PTPCLCSFTSSPVGWERGCLGVD*TQRSSG
Trigger: CCCTGAAGACCTTTGAGTTCAGTCTACACCTAAGCA...ACCCCTTTCCCAGCCCACAGGGCTTGAAGTGAAGGAACAGAGGCAGGGGGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR GCA 90 bp TCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGCTCCCTCTCACCCAGTaGTCTGCTCACTGCTTCATG +
Preference number: 2 (lower is better)
Translates to: SEHVWSNGAQMALYTGEWLPLTQ*SAHCFM
Trigger: CATGAAGCAGTGAGCAGAGCACTGGGTGAGAGGGAG...CCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR GCA 90 bp TCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGTCAGACAGGCAAGGGTaGCAGGCTGGGTTGATCCAA +
Preference number: 2 (lower is better)
Translates to: SEHVWSNGAQMALYTGEWSDRQG*QAGLIQ
Trigger: TTGGATCAACCCAGCCTGGCACCCTTGCCTGTCTGA...CCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CCA 90 bp TGGTGGGGGCACCACATGCCACAAGATGGGAAGATCTGGCAGATAACAGCTGGGTCCAAGTCCTGTCCTTaGCATGGAGGGAGAGCGATG +
Preference number: 2 (lower is better)
Translates to: WWGHHMPQDGKIWQITAGSKSCP*HGGRAM
Trigger: CATCGCTCTCCCTCCATGCCAAGGACAGGACTTGGA...CCCAGCTGTTATCTGCCAGATCTTCCCATCTTGTGGCATGTGGTGCCCCCACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CCA 90 bp ATGTGCTCAGGGGCAGCAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGGCAAGGGTGCCAGGCTaGGTTGATCCAAAGGGAGCT +
Preference number: 2 (lower is better)
Translates to: MCSGAAEDRKSGTQTVVLARVPG*VDPKGA
Trigger: AGCTCCCTTTGGATCAACCCAGCCTGGCACCCTTGC...CAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTGCTGCCCCTGAGCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CCA 90 bp ACTGGTGCAGGGCTTGGCCCCAAGCAAGAGTTGGAGAAGCAGCAATTTCCCTCCCTTTCCCTGTCTGCTTaGATGTGCTCAGGGGCAGCA +
Preference number: 2 (lower is better)
Translates to: TGAGLGPKQELEKQQFPSLSLSA*MCSGAA
Trigger: TGCTGCCCCTGAGCACATCCAAGCAGACAGGGAAAG...GGAGGGAAATTGCTGCTTCTCCAACTCTTGCTTGGGGCCAAGCCCTGCACCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR TCA 90 bp TGGTGGGGGCACCACATGCCACAAGATGGGAAGATCTGGCAGATAACAGCTGGGATGGAGGGAGAGCGATaGCTATACCAGTGGCCATCA +
Preference number: 2 (lower is better)
Translates to: WWGHHMPQDGKIWQITAGMEGER*LYQWPS
Trigger: TGATGGCCACTGGTATAGTCATCGCTCTCCCTCCAT...CCCAGCTGTTATCTGCCAGATCTTCCCATCTTGTGGCATGTGGTGCCCCCACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR TCA 90 bp ACTGGTGCAGGGCTTGGCCCCAAGCAAGAGTTGGAGAAGCAGCAATTTCCCTCCAATCTGGAGAGCAAATaGCCAAAGCGAGGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: TGAGLGPKQELEKQQFPSNLESK*PKRGPQ
Trigger: CTGAGGCCCTCGCTTTGGTCATTTGCTCTCCAGATT...GGAGGGAAATTGCTGCTTCTCCAACTCTTGCTTGGGGCCAAGCCCTGCACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR GCA 90 bp ATGTGCTCAGGGGCAGCAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGTCTGAGCTTCTTCCTTaGTGCCCCAGGACCATGCAC +
Preference number: 2 (lower is better)
Translates to: MCSGAAEDRKSGTQTVVLSELLP*CPRTMH
Trigger: GTGCATGGTCCTGGGGCAGCAAGGAAGAAGCTCAGA...CAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTGCTGCCCCTGAGCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CCA 90 bp AGCAGGGGAGGGACACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGATCATAAGCTCACACCCAATCTaGAGAGCAAATGACCAAAGC +
Preference number: 2 (lower is better)
Translates to: SRGGTPQLSILPKRPGIISSHPI*RANDQS
Trigger: GCTTTGGTCATTTGCTCTCCAGATTGGGTGTGAGCT...TATGATCCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGTGTCCCTCCCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CCA 90 bp AGGGGTCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGCTGTGGTGCCAGATaGGGTGGCTTTTCTCATCTT +
Preference number: 2 (lower is better)
Translates to: RGRNTSGAMVPRWHSTQVSCGAR*GGFSHL
Trigger: AAGATGAGAAAAGCCACCCCATCTGGCACCACAGCT...CACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CCA 90 bp ATGTGCTCAGGGGCAGCAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGAGCAAGATGCAGCTGTaGTGCCAGATGGGGTGGCTT +
Preference number: 2 (lower is better)
Translates to: MCSGAAEDRKSGTQTVVLSKMQL*CQMGWL
Trigger: AAGCCACCCCATCTGGCACCACAGCTGCATCTTGCT...CAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTGCTGCCCCTGAGCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CCA 90 bp AGATCAACAGGACGGTGCCTGTGCCACACTCAGTGCAGTGCCAGATGGCAGGACGTTCAGGTGTCATGTTaGAAAGCATCTGACCTCGCG +
Preference number: 2 (lower is better)
Translates to: RSTGRCLCHTQCSARWQDVQVSC*KASDLA
Trigger: CGCGAGGTCAGATGCTTTCCAACATGACACCTGAAC...GTCCTGCCATCTGGCACTGCACTGAGTGTGGCACAGGCACCGTCCTGTTGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CCA 90 bp ACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGGAACTCAATGGAAAGCAGGATCTaGGCGCGGGAGGCAATGCAA +
Preference number: 2 (lower is better)
Translates to: TSGAMVPRWHSTQVSGNSMESRI*AREAMQ
Trigger: TTGCATTGCCTCCCGCGCCCAGATCCTGCTTTCCAT...TGAGTTCCCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CCA 90 bp ACTGGTGCAGGGCTTGGCCCCAAGCAAGAGTTGGAGAAGCAGCAATTTCCCTCCCCAGTGGGATTGTACTaGAGGGGCTGGGCAATCTAT +
Preference number: 2 (lower is better)
Translates to: TGAGLGPKQELEKQQFPSPVGLY*RGWAIY
Trigger: ATAGATTGCCCAGCCCCTCCAGTACAATCCCACTGG...GGAGGGAAATTGCTGCTTCTCCAACTCTTGCTTGGGGCCAAGCCCTGCACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CCA 90 bp ACTGGTGCAGGGCTTGGCCCCAAGCAAGAGTTGGAGAAGCAGCAATTTCCCTCCGCGGGACCCAAACAGTaGTGCTGGGGAAATTTGTTC +
Preference number: 2 (lower is better)
Translates to: TGAGLGPKQELEKQQFPSAGPKQ*CWGNLF
Trigger: GAACAAATTTCCCCAGCACCACTGTTTGGGTCCCGC...GGAGGGAAATTGCTGCTTCTCCAACTCTTGCTTGGGGCCAAGCCCTGCACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR GCA 90 bp TCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGTTCTCACAAGCAAGATaGAGCTGTGGTGCCAGATGG +
Preference number: 2 (lower is better)
Translates to: SEHVWSNGAQMALYTGEWFSQAR*SCGARW
Trigger: CCATCTGGCACCACAGCTGCATCTTGCTTGTGAGAA...CCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR GCA 90 bp TCTGACCTCGCGGATGTCTACCTGCTTAGGTGTAGACTGAACTCAAAGGTCTTCCCTGGCTCTGCCCCATaGTCTGTGATCCTGTGCAGG +
Preference number: 2 (lower is better)
Translates to: SDLADVYLLRCRLNSKVFPGSAP*SVILCR
Trigger: CCTGCACAGGATCACAGAGCATGGGGCAGAGCCAGG...GAAGACCTTTGAGTTCAGTCTACACCTAAGCAGGTAGACATCCGCGAGGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR GCA 90 bp TGGTGGGGGCACCACATGCCACAAGATGGGAAGATCTGGCAGATAACAGCTGGGGGACCCAAACAGTGGTaGTGGGGAAATTTGTTCCTG +
Preference number: 2 (lower is better)
Translates to: WWGHHMPQDGKIWQITAGGPKQW*WGNLFL
Trigger: CAGGAACAAATTTCCCCAGCACCACTGTTTGGGTCC...CCCAGCTGTTATCTGCCAGATCTTCCCATCTTGTGGCATGTGGTGCCCCCACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CCA 90 bp CAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGGGGAAATTTGTTCCTGAGAGGTGGGGTCTCCTaGGCCATGAGGCCTCTACCT +
Preference number: 2 (lower is better)
Translates to: QKIGKAGPKQWCWGNLFLRGGVS*AMRPLP
Trigger: AGGTAGAGGCCTCATGGCCCAGGAGACCCCACCTCT...CAGGAACAAATTTCCCCAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CCA 90 bp TCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGCCCCACATATCCACCTaGAATCACAGAGAAGCTCAC +
Preference number: 2 (lower is better)
Translates to: SEHVWSNGAQMALYTGEWPHIST*NHREAH
Trigger: GTGAGCTTCTCTGTGATTCCAGGTGGATATGTGGGG...CCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CCA 90 bp CAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGGGGAAATTTGTTCCTGTCCACTGCCGAGTCCTaGGATCTACCCCTGCGAAGC +
Preference number: 2 (lower is better)
Translates to: QKIGKAGPKQWCWGNLFLSTAES*DLPLRS
Trigger: GCTTCGCAGGGGTAGATCCCAGGACTCGGCAGTGGA...CAGGAACAAATTTCCCCAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR TCA 90 bp CAGCAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGGGGAAATTTGTTCGGCCATCACTATGGGTaGGCACAAGGGGTGACTGCA +
Preference number: 2 (lower is better)
Translates to: QQKIGKAGPKQWCWGNLFGHHYG*AQGVTA
Trigger: TGCAGTCACCCCTTGTGCTCACCCATAGTGATGGCC...GAACAAATTTCCCCAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR TCA 90 bp CAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGGGGAAATTTGTTCCTGGCTGACCCTAACCCATaGCTGGCTGCATCCCATCCA +
Preference number: 2 (lower is better)
Translates to: QKIGKAGPKQWCWGNLFLADPNP*LAASHP
Trigger: TGGATGGGATGCAGCCAGTCATGGGTTAGGGTCAGC...CAGGAACAAATTTCCCCAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR TCA 90 bp TCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGCAGCTCTTAAGATTCTaGCACTCTCTTGGGGAAGCT +
Preference number: 2 (lower is better)
Translates to: SEHVWSNGAQMALYTGEWQLLRF*HSLGEA
Trigger: AGCTTCCCCAAGAGAGTGTCAGAATCTTAAGAGCTG...CCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR TCA 90 bp CAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGGGGAAATTTGTTCCTGGAGGGGGAAGAACACTaGAGAGGGAGTCAGATGCCC +
Preference number: 2 (lower is better)
Translates to: QKIGKAGPKQWCWGNLFLEGEEH*RGSQMP
Trigger: GGGCATCTGACTCCCTCTTCAGTGTTCTTCCCCCTC...CAGGAACAAATTTCCCCAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR TCA 90 bp ACTGGTGCAGGGCTTGGCCCCAAGCAAGAGTTGGAGAAGCAGCAATTTCCCTCCCTGAAATTGAAGTTCTaGATTCTGCCGTCACCCCAG +
Preference number: 2 (lower is better)
Translates to: TGAGLGPKQELEKQQFPSLKLKF*ILPSPQ
Trigger: CTGGGGTGACGGCAGAATTCAGAACTTCAATTTCAG...GGAGGGAAATTGCTGCTTCTCCAACTCTTGCTTGGGGCCAAGCCCTGCACCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR GCA 90 bp TCTGACCTCGCGGATGTCTACCTGCTTAGGTGTAGACTGAACTCAAAGGTCTTCTTGCCCAGGCTGGAGTaGAATGGCGTGATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: SDLADVYLLRCRLNSKVFLPRLE*NGVISA
Trigger: AGCCGAGATCACGCCATTGCACTCCAGCCTGGGCAA...GAAGACCTTTGAGTTCAGTCTACACCTAAGCAGGTAGACATCCGCGAGGTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR GCA 90 bp CAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGGGGAAATTTGTTCCTGCTCAGCTCTCCATTCTaGCGAAGCGCCCAGGGATCA +
Preference number: 2 (lower is better)
Translates to: QKIGKAGPKQWCWGNLFLLSSPF*RSAQGS
Trigger: TGATCCCTGGGCGCTTCGGCAGAATGGAGAGCTGAG...CAGGAACAAATTTCCCCAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CCA 90 bp ACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGGAACTCATGTTCCTGTTCCCTTTaGAAGGCTGAGTGGGTGATG +
Preference number: 2 (lower is better)
Translates to: TSGAMVPRWHSTQVSGNSCSCSL*KAEWVM
Trigger: CATCACCCACTCAGCCTTCCAAAGGGAACAGGAACA...TGAGTTCCCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR TCA 90 bp CAGCAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGGGGAAATTTGTTCGTCACGTGTCCTCCCTaGACTCTTCCCCATTTCTCA +
Preference number: 2 (lower is better)
Translates to: QQKIGKAGPKQWCWGNLFVTCPP*TLPHFS
Trigger: TGAGAAATGGGGAAGAGTTCAGGGAGGACACGTGAC...GAACAAATTTCCCCAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR GCA 90 bp CACACACACACACGCACACACACGCACACATGTTGCAGCTCATGTCAATTTATGTGCTCTGTGATCCTGTaGAGGTCACGTGTCCTCCCT +
Preference number: 2 (lower is better)
Translates to: HTHTRTHTHTCCSSCQFMCSVIL*RSRVLP
Trigger: AGGGAGGACACGTGACCTGCACAGGATCACAGAGCA...CATAAATTGACATGAGCTGCAACATGTGTGCGTGTGTGTGCGTGTGTGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CCA 90 bp TTTCCCCACATATCCACCTGGAATCACAGAGAAGCTCACACCCAATCTGGAGAGGGCATTCTGGAGGTGTaGGTACAGGTGAGGGGAAAT +
Preference number: 2 (lower is better)
Translates to: FPHISTWNHREAHTQSGEGILEV*VQVRGN
Trigger: ATTTCCCCTCACCTGTACCCACACCTCCAGAATGCC...CTCTCCAGATTGGGTGTGAGCTTCTCTGTGATTCCAGGTGGATATGTGGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CCA 90 bp CACATATCCACCTGGAATCACAGAGAAGCTCACACCCAATCTGGAGAGCAAATGCAGTGGCCATCACTATaGGTGAGCACAAGGGGTGAC +
Preference number: 2 (lower is better)
Translates to: HISTWNHREAHTQSGEQMQWPSL*VSTRGD
Trigger: GTCACCCCTTGTGCTCACCCATAGTGATGGCCACTG...CATTTGCTCTCCAGATTGGGTGTGAGCTTCTCTGTGATTCCAGGTGGATATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CCA 90 bp CAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGGGGAAATTTGTTCCTGCTTTGGCTGTTACCGTaGCAACCTAGGTCTCAGCAG +
Preference number: 2 (lower is better)
Translates to: QKIGKAGPKQWCWGNLFLLWLLP*QPRSQQ
Trigger: CTGCTGAGACCTAGGTTGCCACGGTAACAGCCAAAG...CAGGAACAAATTTCCCCAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR TCA 90 bp CAGCAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGGGGAAATTTGTTCGGTAAGTCTAACCTCTaGTGTCCTCGTCATCCCCTT +
Preference number: 2 (lower is better)
Translates to: QQKIGKAGPKQWCWGNLFGKSNL*CPRHPL
Trigger: AAGGGGATGACGAGGACATCAGAGGTTAGACTTACC...GAACAAATTTCCCCAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR GCA 90 bp CAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGGGGAAATTTGTTCCTGTCACCCCAGCAACAGTaGCAGTATGATGAGACACTT +
Preference number: 2 (lower is better)
Translates to: QKIGKAGPKQWCWGNLFLSPQQQ*QYDETL
Trigger: AAGTGTCTCATCATACTGGCACTGTTGCTGGGGTGA...CAGGAACAAATTTCCCCAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CAA 90 bp ACACACACATACACACACACACACACGCACACACACGCACACATGTaGCAGCTCATGTCAATTTATGTACAAAACAGGGAGAGGAGAAAG +
Preference number: 2 (lower is better)
Translates to: THTYTHTHTHTHAHM*QLMSIYVQNRERRK
Trigger: CTTTCTCCTCTCCCTGTTTTGTACATAAATTGACATGAGCTGCAACATGTGTGCGTGTGTGTGCGTGTGTGTGTGTGTGTATGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CAA 90 bp CAGAGGTGGGGTCTCCTGGGCCATGAGGCCTCTACCTTAGGGCTGCTCCCAGCCGGTGACTGCAGCCCTTaGGCCTCCTGGGGTCTTTGT +
Preference number: 3 (lower is better)
Translates to: QRWGLLGHEASTLGLLPAGDCSP*ASWGLC
Trigger: ACAAAGACCCCAGGAGGCCAAAGGGCTGCAGTCACC...GGCTGGGAGCAGCCCTAAGGTAGAGGCCTCATGGCCCAGGAGACCCCACCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 72 bp CCCACTGTTCACTTGAGACGCTCCTCCCCACTCAGGTaGGGACAGGGGACACACTCGCAGGGCAGGGCATTC +
Preference number: 3 (lower is better)
Translates to: PTVHLRRSSPLR*GQGTHSQGRAF
Trigger: GAATGCCCTGCCCTGCGAGTGTGTCCCCTGTCCCCACCTGAGTGGGGAGGAGCGTCTCAAGTGAACAGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 72 bp GTGAGCACAAGGGGTGACTGCAGCCCTTTGGCCTCCTaGGGTCTTTGTCCCCTTCCCTCCAGGCTGGAGCTG +
Preference number: 3 (lower is better)
Translates to: VSTRGDCSPLAS*GLCPLPSRLEL
Trigger: CAGCTCCAGCCTGGAGGGAAGGGGACAAAGACCCCAGGAGGCCAAAGGGCTGCAGTCACCCCTTGTGCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 72 bp CCCATGACTGGCTGCATCCCATCCACTGCCGAGTCCTaGGATCTACCCCTGCGAAGCCCAGGGTCACCAGAG +
Preference number: 3 (lower is better)
Translates to: PMTGCIPSTAES*DLPLRSPGSPE
Trigger: CTCTGGTGACCCTGGGCTTCGCAGGGGTAGATCCCAGGACTCGGCAGTGGATGGGATGCAGCCAGTCATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CAA 90 bp AGCAGGGGAGGGACACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGATCATAAAGCCACTGGGCCTGTaGCATGGGGGACAAGGGGGC +
Preference number: 3 (lower is better)
Translates to: SRGGTPQLSILPKRPGIIKPLGL*HGGQGG
Trigger: GCCCCCTTGTCCCCCATGCAACAGGCCCAGTGGCTT...TATGATCCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGTGTCCCTCCCCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CAA 90 bp ACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGATCATAACCTCCTCCCCGCAGGCCTCCTGGGGTCTTaGTCCCCTTCCCTCCAGGCT +
Preference number: 3 (lower is better)
Translates to: TSALHSAEAPRDHNLLPAGLLGS*SPSLQA
Trigger: AGCCTGGAGGGAAGGGGACAAAGACCCCAGGAGGCC...TGCGGGGAGGAGGTTATGATCCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR TCA 72 bp GCCAGGGAGCATGCAGCTGCTCAGACACCTGGTAGGTaGCTAGCAGGGGAGGGACACCTCAGCTCTCCATTC +
Preference number: 3 (lower is better)
Translates to: AREHAAAQTPGR*LAGEGHLSSPF
Trigger: GAATGGAGAGCTGAGGTGTCCCTCCCCTGCTAGTCACCTACCAGGTGTCTGAGCAGCTGCATGCTCCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 72 bp TCCCAGCCCAGGCTGAAGCGGTCCAAGTCCTGTCCTTaGCATGGAGGGAGAGCGATGACTATACCAGTGGCC +
Preference number: 3 (lower is better)
Translates to: SQPRLKRSKSCP*HGGRAMTIPVA
Trigger: GGCCACTGGTATAGTCATCGCTCTCCCTCCATGCCAAGGACAGGACTTGGACCGCTTCAGCCTGGGCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 72 bp CCACCCCCTGCCTCTGTTCCTTCACTTCAAGCCCTGTaGGCTGGGAAAGGGGTCGGAACACGTCTGGAGCAA +
Preference number: 3 (lower is better)
Translates to: PPPASVPSLQAL*AGKGVGTRLEQ
Trigger: TTGCTCCAGACGTGTTCCGACCCCTTTCCCAGCCCACAGGGCTTGAAGTGAAGGAACAGAGGCAGGGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CAA 90 bp AGGGGTCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGGCTCCCACTGTTCACTaGAGACGCTCCTCCCCACTC +
Preference number: 3 (lower is better)
Translates to: RGRNTSGAMVPRWHSTQVAPTVH*RRSSPL
Trigger: GAGTGGGGAGGAGCGTCTCAAGTGAACAGTGGGAGC...CACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR GCA 72 bp ATCAACAGGACGGTGCCTGTGCCACACTCAGTGCAGTaGCAGATGGCAGGACAAACACGGGCTCCATCGTGG +
Preference number: 3 (lower is better)
Translates to: INRTVPVPHSVQ*QMAGQTRAPSW
Trigger: CCACGATGGAGCCCGTGTTTGTCCTGCCATCTGGCACTGCACTGAGTGTGGCACAGGCACCGTCCTGTTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 72 bp GCCCAGGCTGAAGCGGTCCAAGTCCTGTCCTTGGCATaGAGGGAGAGCGATGACTATACCAGTGGCCATCAC +
Preference number: 3 (lower is better)
Translates to: AQAEAVQVLSLA*RESDDYTSGHH
Trigger: GTGATGGCCACTGGTATAGTCATCGCTCTCCCTCCATGCCAAGGACAGGACTTGGACCGCTTCAGCCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 72 bp GGACGGTGCCTGTGCCACACTCAGTGCAGTGCCAGATaGCAGGACAAACACGGGCTCCATCGTGGTTATCAG +
Preference number: 3 (lower is better)
Translates to: GRCLCHTQCSAR*QDKHGLHRGYQ
Trigger: CTGATAACCACGATGGAGCCCGTGTTTGTCCTGCCATCTGGCACTGCACTGAGTGTGGCACAGGCACCGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 72 bp AGGGGTCGGAACACGTCTGGAGCAATGGTGCCCAGATaGCACTCTACACAGGTGAGTGGGAACTCAGCCCCT +
Preference number: 3 (lower is better)
Translates to: RGRNTSGAMVPR*HSTQVSGNSAP
Trigger: AGGGGCTGAGTTCCCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 72 bp AAGCCCTGTGGGCTGGGAAAGGGGTCGGAACACGTCTaGAGCAATGGTGCCCAGATGGCACTCTACACAGGT +
Preference number: 3 (lower is better)
Translates to: KPCGLGKGSEHV*SNGAQMALYTG
Trigger: ACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGACCCCTTTCCCAGCCCACAGGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 72 bp CCCTGCCTCTGTTCCTTCACTTCAAGCCCTGTGGGCTaGGAAAGGGGTCGGAACACGTCTGGAGCAATGGTG +
Preference number: 3 (lower is better)
Translates to: PCLCSFTSSPVG*ERGRNTSGAMV
Trigger: CACCATTGCTCCAGACGTGTTCCGACCCCTTTCCCAGCCCACAGGGCTTGAAGTGAAGGAACAGAGGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CAA 90 bp TCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGGGGTGCCAGGCTGGGTaGATCCAAAGGGAGCTGGTT +
Preference number: 3 (lower is better)
Translates to: SEHVWSNGAQMALYTGEWGCQAG*IQRELV
Trigger: AACCAGCTCCCTTTGGATCAACCCAGCCTGGCACCC...CCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CAA 90 bp GTGACTAGCAGGGGAGGGACACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGGATTCTGACACTCTCTaGGGGAAGCTGGTGATGACT +
Preference number: 3 (lower is better)
Translates to: VTSRGGTPQLSILPKRPGDSDTL*GKLVMT
Trigger: AGTCATCACCAGCTTCCCCAAGAGAGTGTCAGAATC...CCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGTGTCCCTCCCCTGCTAGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CAA 90 bp ACTGGTGCAGGGCTTGGCCCCAAGCAAGAGTTGGAGAAGCAGCAATTTCCCTCCGTCCAAGTCCTGTCCTaGGCATGGAGGGAGAGCGAT +
Preference number: 3 (lower is better)
Translates to: TGAGLGPKQELEKQQFPSVQVLS*AWRESD
Trigger: ATCGCTCTCCCTCCATGCCAAGGACAGGACTTGGAC...GGAGGGAAATTGCTGCTTCTCCAACTCTTGCTTGGGGCCAAGCCCTGCACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CAA 90 bp CACACACACACACGCACACACACGCACACATGTTGCAGCTCATGTCAATTTATGTCCAGCTGGGTGGCCTaGAGGGTCGCTCCCCTCCCC +
Preference number: 3 (lower is better)
Translates to: HTHTRTHTHTCCSSCQFMSSWVA*RVAPLP
Trigger: GGGGAGGGGAGCGACCCTCAAGGCCACCCAGCTGGA...CATAAATTGACATGAGCTGCAACATGTGTGCGTGTGTGTGCGTGTGTGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR TCA 72 bp CTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTaGGTGGGAACTCAGCCCCTGGACGTAACCCCCTTT +
Preference number: 3 (lower is better)
Translates to: LEQWCPDGTLHR*VGTQPLDVTPF
Trigger: AAAGGGGGTTACGTCCAGGGGCTGAGTTCCCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 72 bp CAGTGCCAGATGGCAGGACAAACACGGGCTCCATCGTaGTTATCAGCCAGGAGCAGCTCAGGATGTGACTGG +
Preference number: 3 (lower is better)
Translates to: QCQMAGQTRAPS*LSARSSSGCDW
Trigger: CCAGTCACATCCTGAGCTGCTCCTGGCTGATAACCACGATGGAGCCCGTGTTTGTCCTGCCATCTGGCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 72 bp TGGTGGGGGCACCACATGCCACAAGATGGGAAGATCTaGCAGATAACAGCTGGGAAGCAACTGGTGCAGGGC +
Preference number: 3 (lower is better)
Translates to: WWGHHMPQDGKI*QITAGKQLVQG
Trigger: GCCCTGCACCAGTTGCTTCCCAGCTGTTATCTGCCAGATCTTCCCATCTTGTGGCATGTGGTGCCCCCACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR TCA 72 bp GAGAGCGATGACTATACCAGTGGCCATCACTATGGGTaGGCACAAGGGGTGACTGCAGCCCTTTGGCCTCCT +
Preference number: 3 (lower is better)
Translates to: ESDDYTSGHHYG*AQGVTAALWPP
Trigger: AGGAGGCCAAAGGGCTGCAGTCACCCCTTGTGCTCACCCATAGTGATGGCCACTGGTATAGTCATCGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR TCA 72 bp GGTCCAAGTCCTGTCCTTGGCATGGAGGGAGAGCGATaGCTATACCAGTGGCCATCACTATGGGTGAGCACA +
Preference number: 3 (lower is better)
Translates to: GPSPVLGMEGER*LYQWPSLWVST
Trigger: TGTGCTCACCCATAGTGATGGCCACTGGTATAGTCATCGCTCTCCCTCCATGCCAAGGACAGGACTTGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR TCA 72 bp GGAACAAAAAGGCAGGCAAAAGGTACAGTGCCCACTTaGGCCAGGGAGCATGCAGCTGCTCAGACACCTGGT +
Preference number: 3 (lower is better)
Translates to: GTKRQAKGTVPT*AREHAAAQTPG
Trigger: ACCAGGTGTCTGAGCAGCTGCATGCTCCCTGGCTCAAGTGGGCACTGTACCTTTTGCCTGCCTTTTTGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR TCA 72 bp TGTTACCGTGGCAACCTAGGTCTCAGCAGGTCTGGCTaGAGCCCGCCATTGCCTTTTCTTCCAGTGGGATTG +
Preference number: 3 (lower is better)
Translates to: CYRGNLGLSRSG*SPPLPFLPVGL
Trigger: CAATCCCACTGGAAGAAAAGGCAATGGCGGGCTTCAGCCAGACCTGCTGAGACCTAGGTTGCCACGGTAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 72 bp CATGCCACAAGATGGGAAGATCTGGCAGATAACAGCTaGGAAGCAACTGGTGCAGGGCTTGGCCCCAAGCAA +
Preference number: 3 (lower is better)
Translates to: HATRWEDLADNS*EATGAGLGPKQ
Trigger: TTGCTTGGGGCCAAGCCCTGCACCAGTTGCTTCCCAGCTGTTATCTGCCAGATCTTCCCATCTTGTGGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR TCA 72 bp GCTGGTGGAAAGAGGGAGGAGGGTAAGTCTAACCTCTaGTGTCCTCGTCATCCCCTTCTACAGCCTGTTGTG +
Preference number: 3 (lower is better)
Translates to: AGGKREEGKSNL*CPRHPLLQPVV
Trigger: CACAACAGGCTGTAGAAGGGGATGACGAGGACATCAGAGGTTAGACTTACCCTCCTCCCTCTTTCCACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR TCA 72 bp CTGACCTCGCGGATGTCTACCTGCTTAGGTGTAGACTaGACTCAAAGGTCTTCAGGGGCAGGCAACATGGAG +
Preference number: 3 (lower is better)
Translates to: LTSRMSTCLGVD*TQRSSGAGNME
Trigger: CTCCATGTTGCCTGCCCCTGAAGACCTTTGAGTTCAGTCTACACCTAAGCAGGTAGACATCCGCGAGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR TCA 72 bp TGCTGGGGAAATTTGTTCCTGTTCCCTTTGGAAGGCTaGGTGGGTGATGCAGCACAGGAACAAGGCTTGGAC +
Preference number: 3 (lower is better)
Translates to: CWGNLFLFPLEG*VGDAAQEQGLD
Trigger: GTCCAAGCCTTGTTCCTGTGCTGCATCACCCACTCAGCCTTCCAAAGGGAACAGGAACAAATTTCCCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR TCA 72 bp GGTTTGAAATCTGGGCTCCATCACTTGCTAGCTGATTaGCACCAGGCAGATGACATCACCTCTCTGTGCCCC +
Preference number: 3 (lower is better)
Translates to: GLKSGLHHLLAD*HQADDITSLCP
Trigger: GGGGCACAGAGAGGTGATGTCATCTGCCTGGTGTCAATCAGCTAGCAAGTGATGGAGCCCAGATTTCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 72 bp ATCCACCTGGAATCACAGAGAAGCTCACACCCAATCTaGAGAGCAAATGACCAAAGCGAGGGCCTCAGCTCA +
Preference number: 3 (lower is better)
Translates to: IHLESQRSSHPI*RANDQSEGLSS
Trigger: TGAGCTGAGGCCCTCGCTTTGGTCATTTGCTCTCCAGATTGGGTGTGAGCTTCTCTGTGATTCCAGGTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CAA 90 bp CAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGGGGAAATTTGTTCCTGGACCCAGCACTTGGGTaGATGTCTTTGGCTGTTACC +
Preference number: 3 (lower is better)
Translates to: QKIGKAGPKQWCWGNLFLDPALG*MSLAVT
Trigger: GGTAACAGCCAAAGACATCAACCCAAGTGCTGGGTC...CAGGAACAAATTTCCCCAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CAA 90 bp CACACACACACACGCACACACACGCACACATGTTGCAGCTCATGTCAATTTATGGCACAGGAACAAGGCTaGGACGTCAGAGGTCTCATC +
Preference number: 3 (lower is better)
Translates to: HTHTRTHTHTCCSSCQFMAQEQG*DVRGLI
Trigger: GATGAGACCTCTGACGTCCAAGCCTTGTTCCTGTGC...CATAAATTGACATGAGCTGCAACATGTGTGCGTGTGTGTGCGTGTGTGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR TCA 72 bp ATCACAGAGAAGCTCACACCCAATCTGGAGAGCAAATaGCCAAAGCGAGGGCCTCAGCTCACGAATGAGGAA +
Preference number: 3 (lower is better)
Translates to: ITEKLTPNLESK*PKRGPQLTNEE
Trigger: TTCCTCATTCGTGAGCTGAGGCCCTCGCTTTGGTCATTTGCTCTCCAGATTGGGTGTGAGCTTCTCTGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR GCA 72 bp CAGCAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTaGTGGGGAAATTTGTTCCTGTTCCCTTTGGAAGGC +
Preference number: 3 (lower is better)
Translates to: QQKIGKAGPKQW*WGNLFLFPLEG
Trigger: GCCTTCCAAAGGGAACAGGAACAAATTTCCCCAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 72 bp AACAGTGGTGCTGGGGAAATTTGTTCCTGTTCCCTTTaGAAGGCTGAGTGGGTGATGCAGCACAGGAACAAG +
Preference number: 3 (lower is better)
Translates to: NSGAGEICSCSL*KAEWVMQHRNK
Trigger: CTTGTTCCTGTGCTGCATCACCCACTCAGCCTTCCAAAGGGAACAGGAACAAATTTCCCCAGCACCACTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 72 bp GGGCAGCAGAAGATAGGAAAAGCGGGACCCAAACAGTaGTGCTGGGGAAATTTGTTCCTGTTCCCTTTGGAA +
Preference number: 3 (lower is better)
Translates to: GQQKIGKAGPKQ*CWGNLFLFPLE
Trigger: TTCCAAAGGGAACAGGAACAAATTTCCCCAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTGCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CAA 90 bp ACTGGTGCAGGGCTTGGCCCCAAGCAAGAGTTGGAGAAGCAGCAATTTCCCTCCCAAGATGTTTGGGTGTaGCATAAAGGAAGATGTTCA +
Preference number: 3 (lower is better)
Translates to: TGAGLGPKQELEKQQFPSQDVWV*HKGRCS
Trigger: TGAACATCTTCCTTTATGCAACACCCAAACATCTTG...GGAGGGAAATTGCTGCTTCTCCAACTCTTGCTTGGGGCCAAGCCCTGCACCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR-3UTR CAA 90 bp ACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGGAACTCAAGAAACACATCAAGCTaGGCGTCACTGAAATTGAAG +
Preference number: 3 (lower is better)
Translates to: TSGAMVPRWHSTQVSGNSRNTSS*ASLKLK
Trigger: CTTCAATTTCAGTGACGCCAAGCTTGATGTGTTTCT...TGAGTTCCCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 72 bp AGCCCGCCATTGCCTTTTCTTCCAGTGGGATTGTACTaGAGGGGCTGGGCAATCTATTTATGTTCTCGAAAT +
Preference number: 3 (lower is better)
Translates to: SPPLPFLPVGLY*RGWAIYLCSRN
Trigger: ATTTCGAGAACATAAATAGATTGCCCAGCCCCTCCAGTACAATCCCACTGGAAGAAAAGGCAATGGCGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CCA 72 bp TTGCCTTTTCTTCCAGTGGGATTGTACTGGAGGGGCTaGGCAATCTATTTATGTTCTCGAAATGGAAAGCAG +
Preference number: 3 (lower is better)
Translates to: LPFLPVGLYWRG*AIYLCSRNGKQ
Trigger: CTGCTTTCCATTTCGAGAACATAAATAGATTGCCCAGCCCCTCCAGTACAATCCCACTGGAAGAAAAGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp CAGAGGTGGGGTCTCCTGGGCCATGAGGCCTCTACCTTAGGGCTGCTCCCAGCCTGCTGCAGCGCCGTCTaGCGCAGCTGCTCGGCCGTG +
Preference number: 4 (lower is better)
Translates to: QRWGLLGHEASTLGLLPACCSAV*RSCSAV
Trigger: CACGGCCGAGCAGCTGCGCCAGACGGCGCTGCAGCA...GGCTGGGAGCAGCCCTAAGGTAGAGGCCTCATGGCCCAGGAGACCCCACCTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp CAGAGGTGGGGTCTCCTGGGCCATGAGGCCTCTACCTTAGGGCTGCTCCCAGCCTCACCAAGGGGACCCTaGCCCTGGGGCTGGCCCACC +
Preference number: 4 (lower is better)
Translates to: QRWGLLGHEASTLGLLPASPRGP*PWGWPT
Trigger: GGTGGGCCAGCCCCAGGGCCAGGGTCCCCTTGGTGA...GGCTGGGAGCAGCCCTAAGGTAGAGGCCTCATGGCCCAGGAGACCCCACCTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp GTGACTAGCAGGGGAGGGACACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGGCCGTCTGGCGCAGCTaGTCGGCCGTGCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VTSRGGTPQLSILPKRPGAVWRS*SAVLCS
Trigger: GCTGCAGAGCACGGCCGAGCAGCTGCGCCAGACGGC...CCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGTGTCCCTCCCCTGCTAGTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp CAGAGGTGGGGTCTCCTGGGCCATGAGGCCTCTACCTTAGGGCTGCTCCCAGCCACTGGGCCTGTTGCATaGGGGACAAGGGGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: QRWGLLGHEASTLGLLPATGPVA*GTRGRA
Trigger: CGCCCGCCCCCTTGTCCCCCATGCAACAGGCCCAGT...GGCTGGGAGCAGCCCTAAGGTAGAGGCCTCATGGCCCAGGAGACCCCACCTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp CCCACCCCCTGCCTCTGTTCCTTCACTTCAAGCCCTGTGGGCTGGGAAAGGGGTATGCGCGCCTCCTGCTaGAGCGCCGTCTGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: PTPCLCSFTSSPVGWERGMRASC*SAVWRS
Trigger: GCTGCGCCAGACGGCGCTGCAGCAGGAGGCGCGCAT...ACCCCTTTCCCAGCCCACAGGGCTTGAAGTGAAGGAACAGAGGCAGGGGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp GTGACTAGCAGGGGAGGGACACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGAGTAGGAGAAGGGGGTaGCCTGGCCGGTGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: VTSRGGTPQLSILPKRPGSRRRG*PGRCRW
Trigger: CCAGCGGCACCGGCCAGGGCACCCCCTTCTCCTACT...CCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGTGTCCCTCCCCTGCTAGTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp CAGAGGTGGGGTCTCCTGGGCCATGAGGCCTCTACCTTAGGGCTGCTCCCAGCCGCAAGGGAGGGGCCCTaGATGAGGTGGCCCCTCATG +
Preference number: 4 (lower is better)
Translates to: QRWGLLGHEASTLGLLPAAREGP*MRWPLM
Trigger: CATGAGGGGCCACCTCATCCAGGGCCCCTCCCTTGC...GGCTGGGAGCAGCCCTAAGGTAGAGGCCTCATGGCCCAGGAGACCCCACCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp AGATCAACAGGACGGTGCCTGTGCCACACTCAGTGCAGTGCCAGATGGCAGGACGGGTGCCCTGGCCGGTaGCGCTGGACCTGGACCGCA +
Preference number: 4 (lower is better)
Translates to: RSTGRCLCHTQCSARWQDGCPGR*RWTWTA
Trigger: TGCGGTCCAGGTCCAGCGGCACCGGCCAGGGCACCC...GTCCTGCCATCTGGCACTGCACTGAGTGTGGCACAGGCACCGTCCTGTTGATCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp CTCCAGTGCAGTGCCAGGTGGGCAGGCTCCCACTGTTCACTTGAGACGCTCCTCGGGCCCTGGATGAGGTaGCCCCTCATGCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: LQCSARWAGSHCSLETLLGPWMR*PLMPWP
Trigger: GGGCCAAGGCATGAGGGGCCACCTCATCCAGGGCCC...GAGGAGCGTCTCAAGTGAACAGTGGGAGCCTGCCCACCTGGCACTGCACTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp AGCAGGGGAGGGACACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGATCATAGGGAGGGGCCCTGGATaGGGTGGCCCCTCATGCCTT +
Preference number: 4 (lower is better)
Translates to: SRGGTPQLSILPKRPGIIGRGPG*GGPSCL
Trigger: AAGGCATGAGGGGCCACCTCATCCAGGGCCCCTCCC...TATGATCCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGTGTCCCTCCCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp CAGAGGTGGGGTCTCCTGGGCCATGAGGCCTCTACCTTAGGGCTGCTCCCAGCCGGGAGTCAGATGCCCTaGGCTCTAGTCCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: QRWGLLGHEASTLGLLPAGSQMP*ALVLAL
Trigger: CAGAGCCAGGACTAGAGCTCAGGGCATCTGACTCCC...GGCTGGGAGCAGCCCTAAGGTAGAGGCCTCATGGCCCAGGAGACCCCACCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp ACTGGTGCAGGGCTTGGCCCCAAGCAAGAGTTGGAGAAGCAGCAATTTCCCTCCCGGATGCGCGCCTCCTaGTGCAGCGCCGTCTGGCGC +
Preference number: 4 (lower is better)
Translates to: TGAGLGPKQELEKQQFPSRMRAS*CSAVWR
Trigger: GCGCCAGACGGCGCTGCAGCAGGAGGCGCGCATCCG...GGAGGGAAATTGCTGCTTCTCCAACTCTTGCTTGGGGCCAAGCCCTGCACCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp TGGTGGGGGCACCACATGCCACAAGATGGGAAGATCTGGCAGATAACAGCTGGGGCTCCAGGCGGTCGATaGGGTCCCGCAGGGCGCGCA +
Preference number: 4 (lower is better)
Translates to: WWGHHMPQDGKIWQITAGAPGGR*GPAGRA
Trigger: TGCGCGCCCTGCGGGACCGCATCGACCGCCTGGAGC...CCCAGCTGTTATCTGCCAGATCTTCCCATCTTGTGGCATGTGGTGCCCCCACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp CAGAGGTGGGGTCTCCTGGGCCATGAGGCCTCTACCTTAGGGCTGCTCCCAGCCTCCTTTTCCACTTCCTaGCTCTGCCGGCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QRWGLLGHEASTLGLLPASFSTS*LCRRLL
Trigger: CAGCAGCCGCCGGCAGAGGCAGGAAGTGGAAAAGGA...GGCTGGGAGCAGCCCTAAGGTAGAGGCCTCATGGCCCAGGAGACCCCACCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp CAGAGGTGGGGTCTCCTGGGCCATGAGGCCTCTACCTTAGGGCTGCTCCCAGCCCGACAAAGGCCTGGGTaGCATCAAACCGGCCACCCA +
Preference number: 4 (lower is better)
Translates to: QRWGLLGHEASTLGLLPARQRPG*HQTGHP
Trigger: TGGGTGGCCGGTTTGATGCCACCCAGGCCTTTGTCG...GGCTGGGAGCAGCCCTAAGGTAGAGGCCTCATGGCCCAGGAGACCCCACCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp GTGACTAGCAGGGGAGGGACACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGTCCTCCCCACTCAGGTaGGGACAGGGGACACACTCG +
Preference number: 4 (lower is better)
Translates to: VTSRGGTPQLSILPKRPGSSPLR*GQGTHS
Trigger: CGAGTGTGTCCCCTGTCCCCACCTGAGTGGGGAGGA...CCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGTGTCCCTCCCCTGCTAGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp CTCCAGTGCAGTGCCAGGTGGGCAGGCTCCCACTGTTCACTTGAGACGCTCCTCTGGAGGACTGTAGGCTaGGGACCCGTGCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LQCSARWAGSHCSLETLLWRTVG*GPVLQL
Trigger: GAGCTGGAGCACGGGTCCTCAGCCTACAGTCCTCCA...GAGGAGCGTCTCAAGTGAACAGTGGGAGCCTGCCCACCTGGCACTGCACTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp CCCACCCCCTGCCTCTGTTCCTTCACTTCAAGCCCTGTGGGCTGGGAAAGGGGTTTCCCTCCCCTTCCCTaGCCAGGACTCGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: PTPCLCSFTSSPVGWERGFPPLP*PGLGRC
Trigger: GCATCTCCCGAGTCCTGGGCAGGGAAGGGGAGGGAA...ACCCCTTTCCCAGCCCACAGGGCTTGAAGTGAAGGAACAGAGGCAGGGGGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp CAGAGGTGGGGTCTCCTGGGCCATGAGGCCTCTACCTTAGGGCTGCTCCCAGCCGTGACTGCAGCCCTTTaGCCTCCTGGGGTCTTTGTC +
Preference number: 4 (lower is better)
Translates to: QRWGLLGHEASTLGLLPAVTAAL*PPGVFV
Trigger: GACAAAGACCCCAGGAGGCCAAAGGGCTGCAGTCAC...GGCTGGGAGCAGCCCTAAGGTAGAGGCCTCATGGCCCAGGAGACCCCACCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp TCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGTGGGGCTGGGGCAGCTaGGAGGTTCACACGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SEHVWSNGAQMALYTGEWWGWGS*EVHTGW
Trigger: CCAGCCCGTGTGAACCTCTCAGCTGCCCCAGCCCCA...CCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp TGGTGGGGGCACCACATGCCACAAGATGGGAAGATCTGGCAGATAACAGCTGGGGGCGGCTGCTGTGGCTaGGGGCCACACGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: WWGHHMPQDGKIWQITAGGGCCG*GPHAPS
Trigger: AGAAGGAGCGTGTGGCCCTCAGCCACAGCAGCCGCC...CCCAGCTGTTATCTGCCAGATCTTCCCATCTTGTGGCATGTGGTGCCCCCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp ACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGGAACTCACAGCCTGGGCCCATGTaGGCCCCTTCCCCACCCAGG +
Preference number: 4 (lower is better)
Translates to: TSGAMVPRWHSTQVSGNSQPGPM*APSPPR
Trigger: CCTGGGTGGGGAAGGGGCTCACATGGGCCCAGGCTG...TGAGTTCCCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp CCCACCCCCTGCCTCTGTTCCTTCACTTCAAGCCCTGTGGGCTGGGAAAGGGGTCCTTGGCCCTCCCCTTaGAGACATCGAAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PTPCLCSFTSSPVGWERGPWPSP*RHRRQP
Trigger: AGGCTGCCTTCGATGTCTGCAAGGGGAGGGCCAAGG...ACCCCTTTCCCAGCCCACAGGGCTTGAAGTGAAGGAACAGAGGCAGGGGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp ACTGGTGCAGGGCTTGGCCCCAAGCAAGAGTTGGAGAAGCAGCAATTTCCCTCCCGGTGCCGCTGGACCTaGACCGCAGCCACATGCAGG +
Preference number: 4 (lower is better)
Translates to: TGAGLGPKQELEKQQFPSRCRWT*TAATCR
Trigger: CCTGCATGTGGCTGCGGTCCAGGTCCAGCGGCACCG...GGAGGGAAATTGCTGCTTCTCCAACTCTTGCTTGGGGCCAAGCCCTGCACCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp TGGTGGGGGCACCACATGCCACAAGATGGGAAGATCTGGCAGATAACAGCTGGGGCCCAGGACCTGGGCTaGTGTCAGGGCGTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: WWGHHMPQDGKIWQITAGAQDLG*CQGVVP
Trigger: TGGGACCACGCCCTGACACCAGCCCAGGTCCTGGGC...CCCAGCTGTTATCTGCCAGATCTTCCCATCTTGTGGCATGTGGTGCCCCCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp AGGGGTCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGGCAATGCCCAGGACCTaGGCTGGTGTCAGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: RGRNTSGAMVPRWHSTQVAMPRT*AGVRAW
Trigger: CCACGCCCTGACACCAGCCCAGGTCCTGGGCATTGC...CACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp AGCAGGGGAGGGACACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGATCATACTCAAGTCCCCAAAGTaGCAGGCAAGGGAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: SRGGTPQLSILPKRPGIILKSPK*QAREGP
Trigger: GGGCCCCTCCCTTGCCTGCCACTTTGGGGACTTGAG...TATGATCCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGTGTCCCTCCCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp CTCCAGTGCAGTGCCAGGTGGGCAGGCTCCCACTGTTCACTTGAGACGCTCCTCTCAAGCCCTGTGGGCTaGGAAAGGGGTCGGAACACG +
Preference number: 4 (lower is better)
Translates to: LQCSARWAGSHCSLETLLSSPVG*ERGRNT
Trigger: CGTGTTCCGACCCCTTTCCCAGCCCACAGGGCTTGA...GAGGAGCGTCTCAAGTGAACAGTGGGAGCCTGCCCACCTGGCACTGCACTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp AGGGGTCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGGGGTCTCCTGGGCCATaGGGCCTCTACCTTAGGGCT +
Preference number: 4 (lower is better)
Translates to: RGRNTSGAMVPRWHSTQVGSPGP*GLYLRA
Trigger: AGCCCTAAGGTAGAGGCCTCATGGCCCAGGAGACCC...CACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp TCTACAGCCTGTTGTGGCCCTGAAGGGGAAGCCACTGGGCCTGTTGCATGGGGGGAGCTAAAGAAGGGCTaGAGCTCTGGCCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: STACCGPEGEATGPVAWGELKKG*SSGPWW
Trigger: CCACCATGGGCCAGAGCTTCAGCCCTTCTTTAGCTC...CCCCCATGCAACAGGCCCAGTGGCTTCCCCTTCAGGGCCACAACAGGCTGTAGA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp TGGTGGGGGCACCACATGCCACAAGATGGGAAGATCTGGCAGATAACAGCTGGGAGCCACTGGGCCTGTTaGATGGGGGACAAGGGGGCG +
Preference number: 4 (lower is better)
Translates to: WWGHHMPQDGKIWQITAGSHWAC*MGDKGA
Trigger: CGCCCCCTTGTCCCCCATGCAACAGGCCCAGTGGCT...CCCAGCTGTTATCTGCCAGATCTTCCCATCTTGTGGCATGTGGTGCCCCCACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp TCTACAGCCTGTTGTGGCCCTGAAGGGGAAGCCACTGGGCCTGTTGCATGGGGGCTGCATCCCATCCACTaGCGAGTCCTGGGATCTACC +
Preference number: 4 (lower is better)
Translates to: STACCGPEGEATGPVAWGLHPIH*RVLGST
Trigger: GGTAGATCCCAGGACTCGGCAGTGGATGGGATGCAG...CCCCCATGCAACAGGCCCAGTGGCTTCCCCTTCAGGGCCACAACAGGCTGTAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp CCCACCCCCTGCCTCTGTTCCTTCACTTCAAGCCCTGTGGGCTGGGAAAGGGGTTTGAGCCAGGGAGCATaGAGCTGCTCAGACACCTGG +
Preference number: 4 (lower is better)
Translates to: PTPCLCSFTSSPVGWERGLSQGA*SCSDTW
Trigger: CCAGGTGTCTGAGCAGCTGCATGCTCCCTGGCTCAA...ACCCCTTTCCCAGCCCACAGGGCTTGAAGTGAAGGAACAGAGGCAGGGGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp CAGAGGTGGGGTCTCCTGGGCCATGAGGCCTCTACCTTAGGGCTGCTCCCAGCCCTGTCTGCTTGGATGTaGTCAGGGGCAGCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: QRWGLLGHEASTLGLLPALSAWM*SGAAED
Trigger: ATCTTCTGCTGCCCCTGAGCACATCCAAGCAGACAG...GGCTGGGAGCAGCCCTAAGGTAGAGGCCTCATGGCCCAGGAGACCCCACCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp AGCAGGGGAGGGACACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGATCATACTGGGGAGAGGCTGCTaGGTCCTAGAGAGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: SRGGTPQLSILPKRPGIILGRGC*VLERAE
Trigger: TTCAGCCCTCTCTAGGACGCAGCAGCCTCTCCCCAG...TATGATCCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGTGTCCCTCCCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp CCCACCCCCTGCCTCTGTTCCTTCACTTCAAGCCCTGTGGGCTGGGAAAGGGGTGGGTCGGAACACGTCTaGAGCAATGGTGCCCAGATG +
Preference number: 4 (lower is better)
Translates to: PTPCLCSFTSSPVGWERGGSEHV*SNGAQM
Trigger: CATCTGGGCACCATTGCTCCAGACGTGTTCCGACCC...ACCCCTTTCCCAGCCCACAGGGCTTGAAGTGAAGGAACAGAGGCAGGGGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CAA 72 bp CTCCCAGCCCAGGCTGAAGCGGTCCAAGTCCTGTCCTaGGCATGGAGGGAGAGCGATGACTATACCAGTGGC +
Preference number: 4 (lower is better)
Translates to: LPAQAEAVQVLS*AWRESDDYTSG
Trigger: GCCACTGGTATAGTCATCGCTCTCCCTCCATGCCAAGGACAGGACTTGGACCGCTTCAGCCTGGGCTGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp TCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGGCCACATGCAGGCGGTaGATGCGTAGAGCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: SEHVWSNGAQMALYTGEWATCRR*MRRARA
Trigger: TGCCCGAGCTCTACGCATTCACCGCCTGCATGTGGC...CCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp ACTGGTGCAGGGCTTGGCCCCAAGCAAGAGTTGGAGAAGCAGCAATTTCCCTCCAGTGCGTGGGCAGGCTaGGGAGGGAATATGACCCCC +
Preference number: 4 (lower is better)
Translates to: TGAGLGPKQELEKQQFPSSAWAG*GGNMTP
Trigger: GGGGGTCATATTCCCTCCTCAGCCTGCCCACGCACT...GGAGGGAAATTGCTGCTTCTCCAACTCTTGCTTGGGGCCAAGCCCTGCACCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp AGGGGTCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGGGTACAGTGCCCACTTaGGCCAGGGAGCATGCAGCT +
Preference number: 4 (lower is better)
Translates to: RGRNTSGAMVPRWHSTQVGTVPT*AREHAA
Trigger: AGCTGCATGCTCCCTGGCTCAAGTGGGCACTGTACC...CACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp ACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGATCATAACCTCCTCCCCGCAGGAAGGCTGAGTGGGTaGTGCAGCACAGGAACAAGG +
Preference number: 4 (lower is better)
Translates to: TSALHSAEAPRDHNLLPAGRLSG*CSTGTR
Trigger: CCTTGTTCCTGTGCTGCATCACCCACTCAGCCTTCC...TGCGGGGAGGAGGTTATGATCCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp AGGGGTCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGGGCACTCTACACAGGTaGGTGGGAACTCAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: RGRNTSGAMVPRWHSTQVGTLHR*VGTQPL
Trigger: CAGGGGCTGAGTTCCCACTCACCTGTGTAGAGTGCC...CACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp CTCCAGTGCAGTGCCAGGTGGGCAGGCTCCCACTGTTCACTTGAGACGCTCCTCTCAGCCACACGACCCTaGAGGACGTCCAACTCCTTT +
Preference number: 4 (lower is better)
Translates to: LQCSARWAGSHCSLETLLSATRP*RTSNSF
Trigger: AAAGGAGTTGGACGTCCTGCAGGGTCGTGTGGCTGA...GAGGAGCGTCTCAAGTGAACAGTGGGAGCCTGCCCACCTGGCACTGCACTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp CCCACCCCCTGCCTCTGTTCCTTCACTTCAAGCCCTGTGGGCTGGGAAAGGGGTTCTGAGCTTCTTCCTTaGTGCCCCAGGACCATGCAC +
Preference number: 4 (lower is better)
Translates to: PTPCLCSFTSSPVGWERGSELLP*CPRTMH
Trigger: GTGCATGGTCCTGGGGCAGCAAGGAAGAAGCTCAGA...ACCCCTTTCCCAGCCCACAGGGCTTGAAGTGAAGGAACAGAGGCAGGGGGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp AGGGGTCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGCCTGGCTCTGCCCCATaGTCTGTGATCCTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: RGRNTSGAMVPRWHSTQVPGSAP*SVILCR
Trigger: CCTGCACAGGATCACAGAGCATGGGGCAGAGCCAGG...CACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp GTGACTAGCAGGGGAGGGACACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGTTCCTGGGGTGGGGATaGCAAGATGTTTGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: VTSRGGTPQLSILPKRPGFLGWG*QDVWVL
Trigger: CAACACCCAAACATCTTGGCATCCCCACCCCAGGAA...CCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGTGTCCCTCCCCTGCTAGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp TCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGGAGGTTCACACGGGCTaGAAGCTCCTGCTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: SEHVWSNGAQMALYTGEWEVHTG*KLLLQA
Trigger: CGCCTGGAGCAGGAGCTTCCAGCCCGTGTGAACCTC...CCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp AGGGGTCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGCCAGCTGGTCCATCTTaGAGTGTAGGCCGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: RGRNTSGAMVPRWHSTQVPAGPS*SVGRWA
Trigger: TGCCCACCGGCCTACACTCCAAGATGGACCAGCTGG...CACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp ACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGATCATAACCTCCTCCCCGCAAGCTCCATGGGCTCATaGCCCGCCTCTAGCAGTACA +
Preference number: 4 (lower is better)
Translates to: TSALHSAEAPRDHNLLPASSMGS*PASSST
Trigger: TGTACTGCTAGAGGCGGGCCATGAGCCCATGGAGCT...TGCGGGGAGGAGGTTATGATCCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp AGATCAACAGGACGGTGCCTGTGCCACACTCAGTGCAGTGCCAGATGGCAGGACAGGCTCAGGGGCAGCTaGGCCACCTTGTCGTTGATC +
Preference number: 4 (lower is better)
Translates to: RSTGRCLCHTQCSARWQDRLRGS*ATLSLI
Trigger: GATCAACGACAAGGTGGCCCAGCTGCCCCTGAGCCT...GTCCTGCCATCTGGCACTGCACTGAGTGTGGCACAGGCACCGTCCTGTTGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp CTCCAGTGCAGTGCCAGGTGGGCAGGCTCCCACTGTTCACTTGAGACGCTCCTCCAGGCGATGCAGATGTaGTGCCAGCCATTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: LQCSARWAGSHCSLETLLQAMQM*CQPLSF
Trigger: GAAGGACAATGGCTGGCACCACATCTGCATCGCCTG...GAGGAGCGTCTCAAGTGAACAGTGGGAGCCTGCCCACCTGGCACTGCACTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp GTGACTAGCAGGGGAGGGACACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGATAGGCCATCCCTTGTaGTCCAGGCGATGCAGATGT +
Preference number: 4 (lower is better)
Translates to: VTSRGGTPQLSILPKRPGIGHPL*SRRCRC
Trigger: ACATCTGCATCGCCTGGACCACAAGGGATGGCCTAT...CCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGTGTCCCTCCCCTGCTAGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp AGATCAACAGGACGGTGCCTGTGCCACACTCAGTGCAGTGCCAGATGGCAGGACCCCACTGCCCTTGACTaGCAGCTGGTGGAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: RSTGRCLCHTQCSARWQDPTALD*QLVERG
Trigger: CCCTCTTTCCACCAGCTGCCAGTCAAGGGCAGTGGG...GTCCTGCCATCTGGCACTGCACTGAGTGTGGCACAGGCACCGTCCTGTTGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp AGATCAACAGGACGGTGCCTGTGCCACACTCAGTGCAGTGCCAGATGGCAGGACAGAGGTGGGGTCTCCTaGGCCATGAGGCCTCTACCT +
Preference number: 4 (lower is better)
Translates to: RSTGRCLCHTQCSARWQDRGGVS*AMRPLP
Trigger: AGGTAGAGGCCTCATGGCCCAGGAGACCCCACCTCT...GTCCTGCCATCTGGCACTGCACTGAGTGTGGCACAGGCACCGTCCTGTTGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp CAGAGGTGGGGTCTCCTGGGCCATGAGGCCTCTACCTTAGGGCTGCTCCCAGCCCCCCACATATCCACCTaGAATCACAGAGAAGCTCAC +
Preference number: 4 (lower is better)
Translates to: QRWGLLGHEASTLGLLPAPHIST*NHREAH
Trigger: GTGAGCTTCTCTGTGATTCCAGGTGGATATGTGGGG...GGCTGGGAGCAGCCCTAAGGTAGAGGCCTCATGGCCCAGGAGACCCCACCTCTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp CAGCAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGGGGAAATTTGTTCTGCACAGGAAGCGGCTaGACAGGGGCCCGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: QQKIGKAGPKQWCWGNLFCTGSG*TGARAA
Trigger: TGCCGCCCGGGCCCCTGTTCAGCCGCTTCCTGTGCA...GAACAAATTTCCCCAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp ACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGGAACTCAGGATCCCATGAGGCTTaGTGGGGTGCCAGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: TSGAMVPRWHSTQVSGNSGSHEA*WGARQP
Trigger: TGGCTGCCTGGCACCCCATCAAGCCTCATGGGATCC...TGAGTTCCCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp AGATCAACAGGACGGTGCCTGTGCCACACTCAGTGCAGTGCCAGATGGCAGGACGAGGGGGAAGAACACTaGAGAGGGAGTCAGATGCCC +
Preference number: 4 (lower is better)
Translates to: RSTGRCLCHTQCSARWQDEGEEH*RGSQMP
Trigger: GGGCATCTGACTCCCTCTTCAGTGTTCTTCCCCCTC...GTCCTGCCATCTGGCACTGCACTGAGTGTGGCACAGGCACCGTCCTGTTGATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp TCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGCAGACACCTGGTAGGTaGCTAGCAGGGGAGGGACAC +
Preference number: 4 (lower is better)
Translates to: SEHVWSNGAQMALYTGEWQTPGR*LAGEGH
Trigger: GTGTCCCTCCCCTGCTAGTCACCTACCAGGTGTCTG...CCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp CAGAGGTGGGGTCTCCTGGGCCATGAGGCCTCTACCTTAGGGCTGCTCCCAGCCTCCTCATCTGTAAAATaGGGGCTTTGGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: QRWGLLGHEASTLGLLPASSSVK*GLWPLL
Trigger: GAGAAGAGGCCAAAGCCCTCATTTTACAGATGAGGA...GGCTGGGAGCAGCCCTAAGGTAGAGGCCTCATGGCCCAGGAGACCCCACCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp ATGTGCTCAGGGGCAGCAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGTGCTCGGCCGTGCTCTaGAGCAGCAGCAGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: MCSGAAEDRKSGTQTVVLCSAVL*SSSSSS
Trigger: CGAAGAGCTGCTGCTGCTGCAGAGCACGGCCGAGCA...CAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTGCTGCCCCTGAGCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp AGCAGGGGAGGGACACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGATCATAGCGATGCAGATGTGGTaGCAGCCATTGTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SRGGTPQLSILPKRPGIIAMQMW*QPLSFR
Trigger: CCTGAAGGACAATGGCTGGCACCACATCTGCATCGC...TATGATCCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGTGTCCCTCCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp AGATCAACAGGACGGTGCCTGTGCCACACTCAGTGCAGTGCCAGATGGCAGGACCCACCCAGGGTATCCTaGTCCTGGCCCAAGATAAGG +
Preference number: 4 (lower is better)
Translates to: RSTGRCLCHTQCSARWQDPPRVS*SWPKIR
Trigger: CCTTATCTTGGGCCAGGAGCAGGATACCCTGGGTGG...GTCCTGCCATCTGGCACTGCACTGAGTGTGGCACAGGCACCGTCCTGTTGATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp TCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGCCAGCAGTGGCGCAGTaGAGTTGGCAATGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SEHVWSNGAQMALYTGEWPAVAQ*SWQCPG
Trigger: TCCTGGGCATTGCCAACTGCACTGCGCCACTGCTGG...CCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp GTGACTAGCAGGGGAGGGACACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGTGCATGAGGTTAGTCTaGCTTGAACCTTGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: VTSRGGTPQLSILPKRPGCMRLV*LEPCPG
Trigger: TCCAGGGCAAGGTTCAAGGCAGACTAACCTCATGCA...CCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGTGTCCCTCCCCTGCTAGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp CCCACCCCCTGCCTCTGTTCCTTCACTTCAAGCCCTGTGGGCTGGGAAAGGGGTAAGATGCAGCTGTGGTaGCAGATGGGGTGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: PTPCLCSFTSSPVGWERGKMQLW*QMGWLF
Trigger: GAAAAGCCACCCCATCTGGCACCACAGCTGCATCTT...ACCCCTTTCCCAGCCCACAGGGCTTGAAGTGAAGGAACAGAGGCAGGGGGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp ATGTGCTCAGGGGCAGCAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGTGGAGTGTAGGCCGGTaGGCACAGCAGAGACTGGGG +
Preference number: 4 (lower is better)
Translates to: MCSGAAEDRKSGTQTVVLWSVGR*AQQRLG
Trigger: CCCCAGTCTCTGCTGTGCCCACCGGCCTACACTCCA...CAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTGCTGCCCCTGAGCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp CAGCAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGGGGAAATTTGTTCTGCCGGCGGCTGCTGTaGCTGAGGGCCACACGCTCC +
Preference number: 4 (lower is better)
Translates to: QQKIGKAGPKQWCWGNLFCRRLL*LRATRS
Trigger: GGAGCGTGTGGCCCTCAGCCACAGCAGCCGCCGGCA...GAACAAATTTCCCCAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp CAGCAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGGGGAAATTTGTTCCCTGGCCGGTGCCGCTaGACCTGGACCGCAGCCACA +
Preference number: 4 (lower is better)
Translates to: QQKIGKAGPKQWCWGNLFPGRCR*TWTAAT
Trigger: TGTGGCTGCGGTCCAGGTCCAGCGGCACCGGCCAGG...GAACAAATTTCCCCAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp CAGAGGTGGGGTCTCCTGGGCCATGAGGCCTCTACCTTAGGGCTGCTCCCAGCCTCCCACAGGTTAAACTaGGCAATGTCACCGACAAAG +
Preference number: 4 (lower is better)
Translates to: QRWGLLGHEASTLGLLPASHRLN*AMSPTK
Trigger: CTTTGTCGGTGACATTGCCCAGTTTAACCTGTGGGA...GGCTGGGAGCAGCCCTAAGGTAGAGGCCTCATGGCCCAGGAGACCCCACCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp AGGGGTCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGGCTGGTGTCAGGGCGTaGTCCCACAGGTTAAACTGG +
Preference number: 4 (lower is better)
Translates to: RGRNTSGAMVPRWHSTQVAGVRA*SHRLNW
Trigger: CCAGTTTAACCTGTGGGACCACGCCCTGACACCAGC...CACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp AGGGGTCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGGGGCTGGGCCAGGCATaGAACCAACATTCAAACCGC +
Preference number: 4 (lower is better)
Translates to: RGRNTSGAMVPRWHSTQVGLGQA*NQHSNR
Trigger: GCGGTTTGAATGTTGGTTCCATGCCTGGCCCAGCCC...CACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp ACTGGTGCAGGGCTTGGCCCCAAGCAAGAGTTGGAGAAGCAGCAATTTCCCTCCAGACTGAGGTGGGGCTaGGCCAGGCATGGAACCAAC +
Preference number: 4 (lower is better)
Translates to: TGAGLGPKQELEKQQFPSRLRWG*ARHGTN
Trigger: GTTGGTTCCATGCCTGGCCCAGCCCCACCTCAGTCT...GGAGGGAAATTGCTGCTTCTCCAACTCTTGCTTGGGGCCAAGCCCTGCACCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp ACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGATCATAACCTCCTCCCCGCATCCAAGTCCTGTCCTTaGCATGGAGGGAGAGCGATG +
Preference number: 4 (lower is better)
Translates to: TSALHSAEAPRDHNLLPASKSCP*HGGRAM
Trigger: CATCGCTCTCCCTCCATGCCAAGGACAGGACTTGGA...TGCGGGGAGGAGGTTATGATCCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp ACTGGTGCAGGGCTTGGCCCCAAGCAAGAGTTGGAGAAGCAGCAATTTCCCTCCTCCACTGCCGAGTCCTaGGATCTACCCCTGCGAAGC +
Preference number: 4 (lower is better)
Translates to: TGAGLGPKQELEKQQFPSSTAES*DLPLRS
Trigger: GCTTCGCAGGGGTAGATCCCAGGACTCGGCAGTGGA...GGAGGGAAATTGCTGCTTCTCCAACTCTTGCTTGGGGCCAAGCCCTGCACCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp TCTACAGCCTGTTGTGGCCCTGAAGGGGAAGCCACTGGGCCTGTTGCATGGGGGGCAATGGTGCCCAGATaGCACTCTACACAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: STACCGPEGEATGPVAWGAMVPR*HSTQVS
Trigger: ACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGC...CCCCCATGCAACAGGCCCAGTGGCTTCCCCTTCAGGGCCACAACAGGCTGTAGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp CTCCAGTGCAGTGCCAGGTGGGCAGGCTCCCACTGTTCACTTGAGACGCTCCTCACACGTCTGGAGCAATaGTGCCCAGATGGCACTCTA +
Preference number: 4 (lower is better)
Translates to: LQCSARWAGSHCSLETLLTRLEQ*CPDGTL
Trigger: TAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGT...GAGGAGCGTCTCAAGTGAACAGTGGGAGCCTGCCCACCTGGCACTGCACTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp AGATCAACAGGACGGTGCCTGTGCCACACTCAGTGCAGTGCCAGATGGCAGGACTCACTTCAAGCCCTGTaGGCTGGGAAAGGGGTCGGA +
Preference number: 4 (lower is better)
Translates to: RSTGRCLCHTQCSARWQDSLQAL*AGKGVG
Trigger: TCCGACCCCTTTCCCAGCCCACAGGGCTTGAAGTGA...GTCCTGCCATCTGGCACTGCACTGAGTGTGGCACAGGCACCGTCCTGTTGATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp TGGTGGGGGCACCACATGCCACAAGATGGGAAGATCTGGCAGATAACAGCTGGGGGTGGGGGTCTGGGGTaGCAGGCAGCTGGAATAAAG +
Preference number: 4 (lower is better)
Translates to: WWGHHMPQDGKIWQITAGGGGLG*QAAGIK
Trigger: CTTTATTCCAGCTGCCTGCCACCCCAGACCCCCACC...CCCAGCTGTTATCTGCCAGATCTTCCCATCTTGTGGCATGTGGTGCCCCCACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp CCCACCCCCTGCCTCTGTTCCTTCACTTCAAGCCCTGTGGGCTGGGAAAGGGGTGGTAAGTCTAACCTCTaGTGTCCTCGTCATCCCCTT +
Preference number: 4 (lower is better)
Translates to: PTPCLCSFTSSPVGWERGGKSNL*CPRHPL
Trigger: AAGGGGATGACGAGGACATCAGAGGTTAGACTTACC...ACCCCTTTCCCAGCCCACAGGGCTTGAAGTGAAGGAACAGAGGCAGGGGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp AGCAGGGGAGGGACACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGATCATAAATCTGGAGAGCAAATaGCCAAAGCGAGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SRGGTPQLSILPKRPGIINLESK*PKRGPQ
Trigger: CTGAGGCCCTCGCTTTGGTCATTTGCTCTCCAGATT...TATGATCCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGTGTCCCTCCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp AGCAGGGGAGGGACACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGATCATAAAGCCATCAGCCCTTTaGGACACTCTCAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: SRGGTPQLSILPKRPGIIKPSAL*DTLRQA
Trigger: TGCCTGTCTGAGAGTGTCTCAAAGGGCTGATGGCTT...TATGATCCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGTGTCCCTCCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp ACTGGTGCAGGGCTTGGCCCCAAGCAAGAGTTGGAGAAGCAGCAATTTCCCTCCCGTCCTAGAGAGGGCTaGATGCAGTCAGAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: TGAGLGPKQELEKQQFPSRPREG*MQSEGW
Trigger: CCAGCCTTCTGACTGCATTCAGCCCTCTCTAGGACG...GGAGGGAAATTGCTGCTTCTCCAACTCTTGCTTGGGGCCAAGCCCTGCACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp ACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGGAACTCACATGCAGGCGGTGAATaGGTAGAGCTCGGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: TSGAMVPRWHSTQVSGNSHAGGE*VELGQS
Trigger: GCTCTGCCCGAGCTCTACGCATTCACCGCCTGCATG...TGAGTTCCCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp ACTGGTGCAGGGCTTGGCCCCAAGCAAGAGTTGGAGAAGCAGCAATTTCCCTCCGAAGGCAGCCTTTGTTaGACCCCCAAAGGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: TGAGLGPKQELEKQQFPSEGSLC*TPKGLH
Trigger: GTGGAGGCCTTTGGGGGTGCAACAAAGGCTGCCTTC...GGAGGGAAATTGCTGCTTCTCCAACTCTTGCTTGGGGCCAAGCCCTGCACCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp TCTACAGCCTGTTGTGGCCCTGAAGGGGAAGCCACTGGGCCTGTTGCATGGGGGTCTCACCCAGTGCTCTaGTCACTGCTTCATGCTTCT +
Preference number: 4 (lower is better)
Translates to: STACCGPEGEATGPVAWGSHPVL*SLLHAS
Trigger: AGAAGCATGAAGCAGTGAGCAGAGCACTGGGTGAGA...CCCCCATGCAACAGGCCCAGTGGCTTCCCCTTCAGGGCCACAACAGGCTGTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp AGGGGTCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGTCAGACAGGCAAGGGTaGCAGGCTGGGTTGATCCAA +
Preference number: 4 (lower is better)
Translates to: RGRNTSGAMVPRWHSTQVSDRQG*QAGLIQ
Trigger: TTGGATCAACCCAGCCTGGCACCCTTGCCTGTCTGA...CACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp TGGTGGGGGCACCACATGCCACAAGATGGGAAGATCTGGCAGATAACAGCTGGGCTCAGCTCTCCATTCTaGCGAAGCGCCCAGGGATCA +
Preference number: 4 (lower is better)
Translates to: WWGHHMPQDGKIWQITAGLSSPF*RSAQGS
Trigger: TGATCCCTGGGCGCTTCGGCAGAATGGAGAGCTGAG...CCCAGCTGTTATCTGCCAGATCTTCCCATCTTGTGGCATGTGGTGCCCCCACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp TGGTGGGGGCACCACATGCCACAAGATGGGAAGATCTGGCAGATAACAGCTGGGCTGTGCCACACTCAGTaGAGTGCCAGATGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: WWGHHMPQDGKIWQITAGLCHTQ*SARWQD
Trigger: GTCCTGCCATCTGGCACTGCACTGAGTGTGGCACAG...CCCAGCTGTTATCTGCCAGATCTTCCCATCTTGTGGCATGTGGTGCCCCCACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp ATGTGCTCAGGGGCAGCAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGCTGGGAAGCAACTGGTaGAGGGCTTGGCCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: MCSGAAEDRKSGTQTVVLLGSNW*RAWPQA
Trigger: TGCTTGGGGCCAAGCCCTGCACCAGTTGCTTCCCAG...CAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTGCTGCCCCTGAGCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp CACACACACACACGCACACACACGCACACATGTTGCAGCTCATGTCAATTTATGGAGAAGGGGGTGCCCTaGCCGGTGCCGCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: HTHTRTHTHTCCSSCQFMEKGVP*PVPLDL
Trigger: CAGGTCCAGCGGCACCGGCCAGGGCACCCCCTTCTC...CATAAATTGACATGAGCTGCAACATGTGTGCGTGTGTGTGCGTGTGTGTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp AGGGGTCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGCTTTCCCTGTCTGCTTaGATGTGCTCAGGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: RGRNTSGAMVPRWHSTQVLSLSA*MCSGAA
Trigger: TGCTGCCCCTGAGCACATCCAAGCAGACAGGGAAAG...CACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp CTCCAGTGCAGTGCCAGGTGGGCAGGCTCCCACTGTTCACTTGAGACGCTCCTCGCCCCAAGCAAGAGTTaGAGAAGCAGCAATTTCCCT +
Preference number: 4 (lower is better)
Translates to: LQCSARWAGSHCSLETLLAPSKS*RSSNFP
Trigger: AGGGAAATTGCTGCTTCTCCAACTCTTGCTTGGGGC...GAGGAGCGTCTCAAGTGAACAGTGGGAGCCTGCCCACCTGGCACTGCACTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp TTTCCCCACATATCCACCTGGAATCACAGAGAAGCTCACACCCAATCTGGAGAGGCTCCCAGCCCAGGCTaGAGCGGTCCAAGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: FPHISTWNHREAHTQSGEAPSPG*SGPSPV
Trigger: GACAGGACTTGGACCGCTTCAGCCTGGGCTGGGAGC...CTCTCCAGATTGGGTGTGAGCTTCTCTGTGATTCCAGGTGGATATGTGGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp TGGTGGGGGCACCACATGCCACAAGATGGGAAGATCTGGCAGATAACAGCTGGGTTCCCTTTGGAAGGCTaGGTGGGTGATGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: WWGHHMPQDGKIWQITAGFPLEG*VGDAAQ
Trigger: CTGTGCTGCATCACCCACTCAGCCTTCCAAAGGGAA...CCCAGCTGTTATCTGCCAGATCTTCCCATCTTGTGGCATGTGGTGCCCCCACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp CAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGGGGAAATTTGTTCCTGACCTGGGCCAGCAGCTaGCCCTCCAGCTGGTCCATC +
Preference number: 4 (lower is better)
Translates to: QKIGKAGPKQWCWGNLFLTWASS*PSSWSI
Trigger: GATGGACCAGCTGGAGGGGCAGCTGCTGGCCCAGGT...CAGGAACAAATTTCCCCAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp TCTGACCTCGCGGATGTCTACCTGCTTAGGTGTAGACTGAACTCAAAGGTCTTCTCCACTTCCTGCCTCTaGCGGCGGCTGCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SDLADVYLLRCRLNSKVFSTSCL*RRLLWL
Trigger: CAGCCACAGCAGCCGCCGGCAGAGGCAGGAAGTGGA...GAAGACCTTTGAGTTCAGTCTACACCTAAGCAGGTAGACATCCGCGAGGTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp TCTGACCTCGCGGATGTCTACCTGCTTAGGTGTAGACTGAACTCAAAGGTCTTCCCCAGGGAAGGACGTTaGCCAGCAGTGGCGCAGTGC +
Preference number: 4 (lower is better)
Translates to: SDLADVYLLRCRLNSKVFPREGR*PAVAQC
Trigger: GCACTGCGCCACTGCTGGGCAACGTCCTTCCCTGGG...GAAGACCTTTGAGTTCAGTCTACACCTAAGCAGGTAGACATCCGCGAGGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp ATGTGCTCAGGGGCAGCAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGAAGAGACAACTCCAGTaGAGTGCCAGGTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: MCSGAAEDRKSGTQTVVLKRQLQ*SARWAG
Trigger: GCCTGCCCACCTGGCACTGCACTGGAGTTGTCTCTT...CAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTGCTGCCCCTGAGCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp TCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGCCGGCCTGCAGCTCTTaGATCATGTCTCAGGCTAAG +
Preference number: 4 (lower is better)
Translates to: SEHVWSNGAQMALYTGEWPACSS*IMSQAK
Trigger: CTTAGCCTGAGACATGATGCAAGAGCTGCAGGCCGG...CCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp AGATCAACAGGACGGTGCCTGTGCCACACTCAGTGCAGTGCCAGATGGCAGGACGACATCACCTCTCTGTaGCCCAGTTTCCTCACCTGT +
Preference number: 4 (lower is better)
Translates to: RSTGRCLCHTQCSARWQDDITSL*PSFLTC
Trigger: ACAGGTGAGGAAACTGGGGCACAGAGAGGTGATGTC...GTCCTGCCATCTGGCACTGCACTGAGTGTGGCACAGGCACCGTCCTGTTGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp CACACACACACACGCACACACACGCACACATGTTGCAGCTCATGTCAATTTATGTCACGGATGGTGTCCTaGTCGGCGCGGATGCGCGCC +
Preference number: 4 (lower is better)
Translates to: HTHTRTHTHTCCSSCQFMSRMVS*SARMRA
Trigger: GGCGCGCATCCGCGCCGACCAGGACACCATCCGTGA...CATAAATTGACATGAGCTGCAACATGTGTGCGTGTGTGTGCGTGTGTGTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp ATGTGCTCAGGGGCAGCAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGGACGTTGCCCAGCAGTaGCGCAGTGCAGTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: MCSGAAEDRKSGTQTVVLDVAQQ*RSAVGN
Trigger: ATTGCCAACTGCACTGCGCCACTGCTGGGCAACGTC...CAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTGCTGCCCCTGAGCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp ACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGGAACTCAACAGGTGAGGGGAAATaGGAGGCACAGCCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: TSGAMVPRWHSTQVSGNSTGEGK*EAQPGV
Trigger: CACTCCTGGCTGTGCCTCCCATTTCCCCTCACCTGT...TGAGTTCCCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp AGATCAACAGGACGGTGCCTGTGCCACACTCAGTGCAGTGCCAGATGGCAGGACGGCATTCTGGAGGTGTaGGTACAGGTGAGGGGAAAT +
Preference number: 4 (lower is better)
Translates to: RSTGRCLCHTQCSARWQDGILEV*VQVRGN
Trigger: ATTTCCCCTCACCTGTACCCACACCTCCAGAATGCC...GTCCTGCCATCTGGCACTGCACTGAGTGTGGCACAGGCACCGTCCTGTTGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp ACTGGTGCAGGGCTTGGCCCCAAGCAAGAGTTGGAGAAGCAGCAATTTCCCTCCATGGAAAGCAGGATCTaGGCGCGGGAGGCAATGCAA +
Preference number: 4 (lower is better)
Translates to: TGAGLGPKQELEKQQFPSMESRI*AREAMQ
Trigger: TTGCATTGCCTCCCGCGCCCAGATCCTGCTTTCCAT...GGAGGGAAATTGCTGCTTCTCCAACTCTTGCTTGGGGCCAAGCCCTGCACCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp AGGGGTCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGCCAGTGGGATTGTACTaGAGGGGCTGGGCAATCTAT +
Preference number: 4 (lower is better)
Translates to: RGRNTSGAMVPRWHSTQVPVGLY*RGWAIY
Trigger: ATAGATTGCCCAGCCCCTCCAGTACAATCCCACTGG...CACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp ACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGATCATAACCTCCTCCCCGCATGTTCCTGTTCCCTTTaGAAGGCTGAGTGGGTGATG +
Preference number: 4 (lower is better)
Translates to: TSALHSAEAPRDHNLLPACSCSL*KAEWVM
Trigger: CATCACCCACTCAGCCTTCCAAAGGGAACAGGAACA...TGCGGGGAGGAGGTTATGATCCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp TCTACAGCCTGTTGTGGCCCTGAAGGGGAAGCCACTGGGCCTGTTGCATGGGGGCCCAAACAGTGGTGCTaGGGAAATTTGTTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: STACCGPEGEATGPVAWGPKQWC*GNLFLF
Trigger: GAACAGGAACAAATTTCCCCAGCACCACTGTTTGGG...CCCCCATGCAACAGGCCCAGTGGCTTCCCCTTCAGGGCCACAACAGGCTGTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp ATGTGCTCAGGGGCAGCAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGACACGGGCTCCATCGTaGTTATCAGCCAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: MCSGAAEDRKSGTQTVVLTRAPS*LSARSS
Trigger: GCTGCTCCTGGCTGATAACCACGATGGAGCCCGTGT...CAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTGCTGCCCCTGAGCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp AGCAGGGGAGGGACACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGATCATAGGACGTAACCCCCTTTaGTTTGAAATCTGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SRGGTPQLSILPKRPGIIGRNPL*FEIWAP
Trigger: TGGAGCCCAGATTTCAAACCAAAGGGGGTTACGTCC...TATGATCCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGTGTCCCTCCCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp CACACACACACACGCACACACACGCACACATGTTGCAGCTCATGTCAATTTATGAGCCTGTTGTGGCCCTaGAGGGGAAGCCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: HTHTRTHTHTCCSSCQFMSLLWP*RGSHWA
Trigger: GGCCCAGTGGCTTCCCCTTCAGGGCCACAACAGGCT...CATAAATTGACATGAGCTGCAACATGTGTGCGTGTGTGTGCGTGTGTGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp AGATCAACAGGACGGTGCCTGTGCCACACTCAGTGCAGTGCCAGATGGCAGGACATGTTGGAAAGCATCTaGCCTCGCGGATGTCTACCT +
Preference number: 4 (lower is better)
Translates to: RSTGRCLCHTQCSARWQDMLESI*PRGCLP
Trigger: AGGTAGACATCCGCGAGGTCAGATGCTTTCCAACAT...GTCCTGCCATCTGGCACTGCACTGAGTGTGGCACAGGCACCGTCCTGTTGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp ATGTGCTCAGGGGCAGCAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGGTGTGTGGGCTCAAGTaGCCATGCAAGTGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: MCSGAAEDRKSGTQTVVLVCGLK*PCKCCH
Trigger: GTGACAGCACTTGCATGGTCACTTGAGCCCACACAC...CAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTGCTGCCCCTGAGCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp AGCAGGGGAGGGACACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGATCATACAGTGTCAGACAACTTaGCATGCTCACTCACACTCA +
Preference number: 4 (lower is better)
Translates to: SRGGTPQLSILPKRPGIIQCQTT*HAHSHS
Trigger: TGAGTGTGAGTGAGCATGTCAAGTTGTCTGACACTG...TATGATCCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGTGTCCCTCCCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp ATGTGCTCAGGGGCAGCAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGCTCCCTCTCACCCAGTaGTCTGCTCACTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: MCSGAAEDRKSGTQTVVLLPLTQ*SAHCFM
Trigger: CATGAAGCAGTGAGCAGAGCACTGGGTGAGAGGGAG...CAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTGCTGCCCCTGAGCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp CAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGGGGAAATTTGTTCCTGCCTGGGATCTACCCCTaGGAAGCCCAGGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: QKIGKAGPKQWCWGNLFLPGIYP*EAQGHQ
Trigger: CTGGTGACCCTGGGCTTCGCAGGGGTAGATCCCAGG...CAGGAACAAATTTCCCCAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp AGGGGTCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGTTCTCACAAGCAAGATaGAGCTGTGGTGCCAGATGG +
Preference number: 4 (lower is better)
Translates to: RGRNTSGAMVPRWHSTQVFSQAR*SCGARW
Trigger: CCATCTGGCACCACAGCTGCATCTTGCTTGTGAGAA...CACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp ACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGGAACTCATACTCAGGCCAAGGGTaGTGGGACACACAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: TSGAMVPRWHSTQVSGNSYSGQG*WDTQRR
Trigger: CCTCCTTTGTGTGTCCCAGCACCCTTGGCCTGAGTA...TGAGTTCCCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp CAGCAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGGGGAAATTTGTTCGTGGCGCAGTGCAGTTaGCAATGCCCAGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: QQKIGKAGPKQWCWGNLFVAQCS*QCPGPG
Trigger: CCCAGGTCCTGGGCATTGCCAACTGCACTGCGCCAC...GAACAAATTTCCCCAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp TTTCCCCACATATCCACCTGGAATCACAGAGAAGCTCACACCCAATCTGGAGAGTGGCTCTGCCAGAGGTaGGGTCTCCTGGGCCATGAG +
Preference number: 4 (lower is better)
Translates to: FPHISTWNHREAHTQSGEWLCQR*GLLGHE
Trigger: CTCATGGCCCAGGAGACCCCACCTCTGGCAGAGCCA...CTCTCCAGATTGGGTGTGAGCTTCTCTGTGATTCCAGGTGGATATGTGGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp TCTACAGCCTGTTGTGGCCCTGAAGGGGAAGCCACTGGGCCTGTTGCATGGGGGTGGTGCCAGATGGGGTaGCTTTTCTCATCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: STACCGPEGEATGPVAWGWCQMG*LFSSLR
Trigger: TCTTAAAGATGAGAAAAGCCACCCCATCTGGCACCA...CCCCCATGCAACAGGCCCAGTGGCTTCCCCTTCAGGGCCACAACAGGCTGTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp TGGTGGGGGCACCACATGCCACAAGATGGGAAGATCTGGCAGATAACAGCTGGGCTTTGGCTGTTACCGTaGCAACCTAGGTCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: WWGHHMPQDGKIWQITAGLWLLP*QPRSQQ
Trigger: CTGCTGAGACCTAGGTTGCCACGGTAACAGCCAAAG...CCCAGCTGTTATCTGCCAGATCTTCCCATCTTGTGGCATGTGGTGCCCCCACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp TCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGCTTTGGAAGGCTGAGTaGGTGATGCAGCACAGGAAC +
Preference number: 4 (lower is better)
Translates to: SEHVWSNGAQMALYTGEWLWKAE*VMQHRN
Trigger: GTTCCTGTGCTGCATCACCCACTCAGCCTTCCAAAG...CCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp ACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGGAACTCATGGTGGCAAGGGGATTaGTCCCCTTGGGATGTTGGT +
Preference number: 4 (lower is better)
Translates to: TSGAMVPRWHSTQVSGNSWWQGD*SPWDVG
Trigger: ACCAACATCCCAAGGGGACCAATCCCCTTGCCACCA...TGAGTTCCCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp ACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGATCATAACCTCCTCCCCGCATCCTGTCCAAATCTGTaGTCCCAGGTGATGCAAAGT +
Preference number: 4 (lower is better)
Translates to: TSALHSAEAPRDHNLLPASCPNL*SQVMQS
Trigger: ACTTTGCATCACCTGGGACCACAGATTTGGACAGGA...TGCGGGGAGGAGGTTATGATCCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp CACATATCCACCTGGAATCACAGAGAAGCTCACACCCAATCTGGAGAGCAAATGGGTGAGCACAAGGGGTaGCTGCAGCCCTTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: HISTWNHREAHTQSGEQMGEHKG*LQPFGL
Trigger: GAGGCCAAAGGGCTGCAGTCACCCCTTGTGCTCACC...CATTTGCTCTCCAGATTGGGTGTGAGCTTCTCTGTGATTCCAGGTGGATATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp CAGCAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGGGGAAATTTGTTCCTTCTCCCCACCCTCTaGGCTTCTTCCTTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QQKIGKAGPKQWCWGNLFLLPTL*ASSLLP
Trigger: GGGCAGCAAGGAAGAAGCTCAGAGGGTGGGGAGAAG...GAACAAATTTCCCCAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp ACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGGAACTCACTGACTTCGAACTCCTaGCCTCAAGTGATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: TSGAMVPRWHSTQVSGNSLTSNS*PQVICL
Trigger: CAGGCAGATCACTTGAGGTCAGGAGTTCGAAGTCAG...TGAGTTCCCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp AGCAGGGGAGGGACACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGATCATATTTTTGGCTCTCCTGTaGACTCTAGCTGAGCTAAAG +
Preference number: 4 (lower is better)
Translates to: SRGGTPQLSILPKRPGIIFLALL*TLAELK
Trigger: CTTTAGCTCAGCTAGAGTTCACAGGAGAGCCAAAAA...TATGATCCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGTGTCCCTCCCCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp TTTCCCCACATATCCACCTGGAATCACAGAGAAGCTCACACCCAATCTGGAGAGGGCTGGCCCACCCCCTaGCTCTGTTCCTTCACTTCA +
Preference number: 4 (lower is better)
Translates to: FPHISTWNHREAHTQSGEGWPTP*LCSFTS
Trigger: TGAAGTGAAGGAACAGAGGCAGGGGGTGGGCCAGCC...CTCTCCAGATTGGGTGTGAGCTTCTCTGTGATTCCAGGTGGATATGTGGGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp TCTGACCTCGCGGATGTCTACCTGCTTAGGTGTAGACTGAACTCAAAGGTCTTCCAGTGCAGTGCCAGGTaGGCAGGCTCCCACTGTTCA +
Preference number: 4 (lower is better)
Translates to: SDLADVYLLRCRLNSKVFQCSAR*AGSHCS
Trigger: TGAACAGTGGGAGCCTGCCCACCTGGCACTGCACTG...GAAGACCTTTGAGTTCAGTCTACACCTAAGCAGGTAGACATCCGCGAGGTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp AGATCAACAGGACGGTGCCTGTGCCACACTCAGTGCAGTGCCAGATGGCAGGACAGCTCACACCCAATCTaGAGAGCAAATGACCAAAGC +
Preference number: 4 (lower is better)
Translates to: RSTGRCLCHTQCSARWQDSSHPI*RANDQS
Trigger: GCTTTGGTCATTTGCTCTCCAGATTGGGTGTGAGCT...GTCCTGCCATCTGGCACTGCACTGAGTGTGGCACAGGCACCGTCCTGTTGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp TTTCCCCACATATCCACCTGGAATCACAGAGAAGCTCACACCCAATCTGGAGAGAGGTCTCAGCAGGTCTaGCTGAAGCCCGCCATTGCC +
Preference number: 4 (lower is better)
Translates to: FPHISTWNHREAHTQSGERSQQV*LKPAIA
Trigger: GGCAATGGCGGGCTTCAGCCAGACCTGCTGAGACCT...CTCTCCAGATTGGGTGTGAGCTTCTCTGTGATTCCAGGTGGATATGTGGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp CAGCAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGGGGAAATTTGTTCCACTCACACTCAGCCTaGGCCCATGTGAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: QQKIGKAGPKQWCWGNLFHSHSA*AHVSPF
Trigger: GAAGGGGCTCACATGGGCCCAGGCTGAGTGTGAGTG...GAACAAATTTCCCCAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CAA 72 bp TGGCAGATAACAGCTGGGAAGCAACTGGTGCAGGGCTaGGCCCCAAGCAAGAGTTGGAGAAGCAGCAATTTC +
Preference number: 4 (lower is better)
Translates to: WQITAGKQLVQG*APSKSWRSSNF
Trigger: GAAATTGCTGCTTCTCCAACTCTTGCTTGGGGCCAAGCCCTGCACCAGTTGCTTCCCAGCTGTTATCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp TGGTGGGGGCACCACATGCCACAAGATGGGAAGATCTGGCAGATAACAGCTGGGTGCTTAGGTGTAGACTaGACTCAAAGGTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: WWGHHMPQDGKIWQITAGCLGVD*TQRSSG
Trigger: CCCTGAAGACCTTTGAGTTCAGTCTACACCTAAGCA...CCCAGCTGTTATCTGCCAGATCTTCCCATCTTGTGGCATGTGGTGCCCCCACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp TTTCCCCACATATCCACCTGGAATCACAGAGAAGCTCACACCCAATCTGGAGAGCTCAGCAGGTCTGGCTaGAGCCCGCCATTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: FPHISTWNHREAHTQSGELSRSG*SPPLPF
Trigger: AAAAGGCAATGGCGGGCTTCAGCCAGACCTGCTGAG...CTCTCCAGATTGGGTGTGAGCTTCTCTGTGATTCCAGGTGGATATGTGGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp GTGACTAGCAGGGGAGGGACACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGAAGATGTTTGGGTGTTaGATAAAGGAAGATGTTCAG +
Preference number: 4 (lower is better)
Translates to: VTSRGGTPQLSILPKRPGKMFGC*IKEDVQ
Trigger: CTGAACATCTTCCTTTATGCAACACCCAAACATCTT...CCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGTGTCCCTCCCCTGCTAGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp TGGTGGGGGCACCACATGCCACAAGATGGGAAGATCTGGCAGATAACAGCTGGGCCAGGACTCGGGAGATaGTCAGCTTCCTTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: WWGHHMPQDGKIWQITAGPGLGR*SASFSF
Trigger: AAAAGAAAAGGAAGCTGAGCATCTCCCGAGTCCTGG...CCCAGCTGTTATCTGCCAGATCTTCCCATCTTGTGGCATGTGGTGCCCCCACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp TCTGACCTCGCGGATGTCTACCTGCTTAGGTGTAGACTGAACTCAAAGGTCTTCGCAGTACAATCTCGTTaGCCTGCCCGGGCACTGAGT +
Preference number: 4 (lower is better)
Translates to: SDLADVYLLRCRLNSKVFAVQSR*PARALS
Trigger: ACTCAGTGCCCGGGCAGGCCAACGAGATTGTACTGC...GAAGACCTTTGAGTTCAGTCTACACCTAAGCAGGTAGACATCCGCGAGGTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp CACATATCCACCTGGAATCACAGAGAAGCTCACACCCAATCTGGAGAGCAAATGCCCTTGACTGGCAGCTaGTGGAAAGAGGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: HISTWNHREAHTQSGEQMPLTGS*WKEGGG
Trigger: CCCTCCTCCCTCTTTCCACCAGCTGCCAGTCAAGGG...CATTTGCTCTCCAGATTGGGTGTGAGCTTCTCTGTGATTCCAGGTGGATATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp TCTGACCTCGCGGATGTCTACCTGCTTAGGTGTAGACTGAACTCAAAGGTCTTCCCTCCAGGCTGGAGCTaGGAAAGGAATGTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SDLADVYLLRCRLNSKVFPPGWS*ERNVLE
Trigger: CTCCAGGACATTCCTTTCCCAGCTCCAGCCTGGAGG...GAAGACCTTTGAGTTCAGTCTACACCTAAGCAGGTAGACATCCGCGAGGTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp ATGTGCTCAGGGGCAGCAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGAGCTGTGGTGCCAGATaGGGTGGCTTTTCTCATCTT +
Preference number: 4 (lower is better)
Translates to: MCSGAAEDRKSGTQTVVLSCGAR*GGFSHL
Trigger: AAGATGAGAAAAGCCACCCCATCTGGCACCACAGCT...CAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTGCTGCCCCTGAGCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp ACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGGAACTCAGTTCAGGTGTCATGTTaGAAAGCATCTGACCTCGCG +
Preference number: 4 (lower is better)
Translates to: TSGAMVPRWHSTQVSGNSVQVSC*KASDLA
Trigger: CGCGAGGTCAGATGCTTTCCAACATGACACCTGAAC...TGAGTTCCCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp TGGTGGGGGCACCACATGCCACAAGATGGGAAGATCTGGCAGATAACAGCTGGGCCACATGCCACAAGATaGGAAGATCTGGCAGATAAC +
Preference number: 4 (lower is better)
Translates to: WWGHHMPQDGKIWQITAGPHATR*EDLADN
Trigger: GTTATCTGCCAGATCTTCCCATCTTGTGGCATGTGG...CCCAGCTGTTATCTGCCAGATCTTCCCATCTTGTGGCATGTGGTGCCCCCACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp CACATATCCACCTGGAATCACAGAGAAGCTCACACCCAATCTGGAGAGCAAATGGTCCCCTTGGGATGTTaGTGGGGGCACCACATGCCA +
Preference number: 4 (lower is better)
Translates to: HISTWNHREAHTQSGEQMVPLGC*WGHHMP
Trigger: TGGCATGTGGTGCCCCCACCAACATCCCAAGGGGAC...CATTTGCTCTCCAGATTGGGTGTGAGCTTCTCTGTGATTCCAGGTGGATATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp CACATATCCACCTGGAATCACAGAGAAGCTCACACCCAATCTGGAGAGCAAATGGCTGACCCTAACCCATaGCTGGCTGCATCCCATCCA +
Preference number: 4 (lower is better)
Translates to: HISTWNHREAHTQSGEQMADPNP*LAASHP
Trigger: TGGATGGGATGCAGCCAGTCATGGGTTAGGGTCAGC...CATTTGCTCTCCAGATTGGGTGTGAGCTTCTCTGTGATTCCAGGTGGATATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp AGCAGGGGAGGGACACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGATCATAAAGGTAACAAAACCATaGCACAGATCACACACACAT +
Preference number: 4 (lower is better)
Translates to: SRGGTPQLSILPKRPGIIKVTKP*HRSHTH
Trigger: ATGTGTGTGTGATCTGTGTCATGGTTTTGTTACCTT...TATGATCCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGTGTCCCTCCCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp ACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGGAACTCATCACCCCAGCAACAGTaGCAGTATGATGAGACACTT +
Preference number: 4 (lower is better)
Translates to: TSGAMVPRWHSTQVSGNSSPQQQ*QYDETL
Trigger: AAGTGTCTCATCATACTGGCACTGTTGCTGGGGTGA...TGAGTTCCCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp CAGCAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGGGGAAATTTGTTCCGTCTGGAGCAATGGTaGCCAGATGGCACTCTACAC +
Preference number: 4 (lower is better)
Translates to: QQKIGKAGPKQWCWGNLFRLEQW*PDGTLH
Trigger: GTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACG...GAACAAATTTCCCCAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp TTTCCCCACATATCCACCTGGAATCACAGAGAAGCTCACACCCAATCTGGAGAGGGTGGGGGCACCACATaGCACAAGATGGGAAGATCT +
Preference number: 4 (lower is better)
Translates to: FPHISTWNHREAHTQSGEGGGTT*HKMGRS
Trigger: AGATCTTCCCATCTTGTGGCATGTGGTGCCCCCACC...CTCTCCAGATTGGGTGTGAGCTTCTCTGTGATTCCAGGTGGATATGTGGGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp CACATATCCACCTGGAATCACAGAGAAGCTCACACCCAATCTGGAGAGCAAATGAGCTGCCCCTCCAGCTaGTCCATCTTGGAGTGTAGG +
Preference number: 4 (lower is better)
Translates to: HISTWNHREAHTQSGEQMSCPSS*SILECR
Trigger: CCTACACTCCAAGATGGACCAGCTGGAGGGGCAGCT...CATTTGCTCTCCAGATTGGGTGTGAGCTTCTCTGTGATTCCAGGTGGATATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp CACACACACACACGCACACACACGCACACATGTTGCAGCTCATGTCAATTTATGGGGAAAGGAATGTCCTaGAGACTGAGGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: HTHTRTHTHTCCSSCQFMGKGMS*RLRWGW
Trigger: CCAGCCCCACCTCAGTCTCCAGGACATTCCTTTCCC...CATAAATTGACATGAGCTGCAACATGTGTGCGTGTGTGTGCGTGTGTGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp CAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGGGGAAATTTGTTCCTGCAGTGGCCATCACTATaGGTGAGCACAAGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: QKIGKAGPKQWCWGNLFLQWPSL*VSTRGD
Trigger: GTCACCCCTTGTGCTCACCCATAGTGATGGCCACTG...CAGGAACAAATTTCCCCAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp TCTGACCTCGCGGATGTCTACCTGCTTAGGTGTAGACTGAACTCAAAGGTCTTCCAGGGGCAGGCAACATaGAGGGGGAAGAACACTGAA +
Preference number: 4 (lower is better)
Translates to: SDLADVYLLRCRLNSKVFQGQAT*RGKNTE
Trigger: TTCAGTGTTCTTCCCCCTCCATGTTGCCTGCCCCTG...GAAGACCTTTGAGTTCAGTCTACACCTAAGCAGGTAGACATCCGCGAGGTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp TCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGTTTATGTTCTCGAAATaGAAAGCAGGATCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: SEHVWSNGAQMALYTGEWFMFSK*KAGSGR
Trigger: GCGCCCAGATCCTGCTTTCCATTTCGAGAACATAAA...CCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp CACATATCCACCTGGAATCACAGAGAAGCTCACACCCAATCTGGAGAGCAAATGCCCTTGGGATGTTGGTaGGGGCACCACATGCCACAA +
Preference number: 4 (lower is better)
Translates to: HISTWNHREAHTQSGEQMPLGCW*GHHMPQ
Trigger: TTGTGGCATGTGGTGCCCCCACCAACATCCCAAGGG...CATTTGCTCTCCAGATTGGGTGTGAGCTTCTCTGTGATTCCAGGTGGATATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp TCTGACCTCGCGGATGTCTACCTGCTTAGGTGTAGACTGAACTCAAAGGTCTTCAAGATAAGGATCCCATaGGGCTTGATGGGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: SDLADVYLLRCRLNSKVFKIRIP*GLMGCQ
Trigger: CTGGCACCCCATCAAGCCTCATGGGATCCTTATCTT...GAAGACCTTTGAGTTCAGTCTACACCTAAGCAGGTAGACATCCGCGAGGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp TCTGACCTCGCGGATGTCTACCTGCTTAGGTGTAGACTGAACTCAAAGGTCTTCATGGAGGGAGAGCGATaGCTATACCAGTGGCCATCA +
Preference number: 4 (lower is better)
Translates to: SDLADVYLLRCRLNSKVFMEGER*LYQWPS
Trigger: TGATGGCCACTGGTATAGTCATCGCTCTCCCTCCAT...GAAGACCTTTGAGTTCAGTCTACACCTAAGCAGGTAGACATCCGCGAGGTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp TCTGACCTCGCGGATGTCTACCTGCTTAGGTGTAGACTGAACTCAAAGGTCTTCGTCACGTGTCCTCCCTaGACTCTTCCCCATTTCTCA +
Preference number: 4 (lower is better)
Translates to: SDLADVYLLRCRLNSKVFVTCPP*TLPHFS
Trigger: TGAGAAATGGGGAAGAGTTCAGGGAGGACACGTGAC...GAAGACCTTTGAGTTCAGTCTACACCTAAGCAGGTAGACATCCGCGAGGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp CACATATCCACCTGGAATCACAGAGAAGCTCACACCCAATCTGGAGAGCAAATGTGCTCTGTGATCCTGTaGAGGTCACGTGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: HISTWNHREAHTQSGEQMCSVIL*RSRVLP
Trigger: AGGGAGGACACGTGACCTGCACAGGATCACAGAGCA...CATTTGCTCTCCAGATTGGGTGTGAGCTTCTCTGTGATTCCAGGTGGATATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp TCTGACCTCGCGGATGTCTACCTGCTTAGGTGTAGACTGAACTCAAAGGTCTTCGCGGGACCCAAACAGTaGTGCTGGGGAAATTTGTTC +
Preference number: 4 (lower is better)
Translates to: SDLADVYLLRCRLNSKVFAGPKQ*CWGNLF
Trigger: GAACAAATTTCCCCAGCACCACTGTTTGGGTCCCGC...GAAGACCTTTGAGTTCAGTCTACACCTAAGCAGGTAGACATCCGCGAGGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CAA 72 bp TCAGTAGGGTGCACTAATGTCACAGTGTCAGACAACTaGACATGCTCACTCACACTCAGCCTGGGCCCATGT +
Preference number: 4 (lower is better)
Translates to: SVGCTNVTVSDN*TCSLTLSLGPC
Trigger: ACATGGGCCCAGGCTGAGTGTGAGTGAGCATGTCAAGTTGTCTGACACTGTGACATTAGTGCACCCTACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp CACACACACACACGCACACACACGCACACATGTTGCAGCTCATGTCAATTTATGGCTGAAGCCCGCCATTaGCTTTTCTTCCAGTGGGAT +
Preference number: 4 (lower is better)
Translates to: HTHTRTHTHTCCSSCQFMAEARH*LFFQWD
Trigger: ATCCCACTGGAAGAAAAGGCAATGGCGGGCTTCAGC...CATAAATTGACATGAGCTGCAACATGTGTGCGTGTGTGTGCGTGTGTGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp TCTGACCTCGCGGATGTCTACCTGCTTAGGTGTAGACTGAACTCAAAGGTCTTCGGACCCAAACAGTGGTaGTGGGGAAATTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: SDLADVYLLRCRLNSKVFGPKQW*WGNLFL
Trigger: CAGGAACAAATTTCCCCAGCACCACTGTTTGGGTCC...GAAGACCTTTGAGTTCAGTCTACACCTAAGCAGGTAGACATCCGCGAGGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp CACACACACACACGCACACACACGCACACATGTTGCAGCTCATGTCAATTTATGCCACACTCAGTGCAGTaGCAGATGGCAGGACAAACA +
Preference number: 4 (lower is better)
Translates to: HTHTRTHTHTCCSSCQFMPHSVQ*QMAGQT
Trigger: TGTTTGTCCTGCCATCTGGCACTGCACTGAGTGTGG...CATAAATTGACATGAGCTGCAACATGTGTGCGTGTGTGTGCGTGTGTGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp CACACACACACACGCACACACACGCACACATGTTGCAGCTCATGTCAATTTATGAGCTCAGGATGTGACTaGGCCATGTCTGACTCCTCT +
Preference number: 4 (lower is better)
Translates to: HTHTRTHTHTCCSSCQFMSSGCD*AMSDSS
Trigger: AGAGGAGTCAGACATGGCCCAGTCACATCCTGAGCT...CATAAATTGACATGAGCTGCAACATGTGTGCGTGTGTGTGCGTGTGTGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp TTTCCCCACATATCCACCTGGAATCACAGAGAAGCTCACACCCAATCTGGAGAGCAGCTCTTAAGATTCTaGCACTCTCTTGGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: FPHISTWNHREAHTQSGEQLLRF*HSLGEA
Trigger: AGCTTCCCCAAGAGAGTGTCAGAATCTTAAGAGCTG...CTCTCCAGATTGGGTGTGAGCTTCTCTGTGATTCCAGGTGGATATGTGGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp TCTGACCTCGCGGATGTCTACCTGCTTAGGTGTAGACTGAACTCAAAGGTCTTCCTGAAATTGAAGTTCTaGATTCTGCCGTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: SDLADVYLLRCRLNSKVFLKLKF*ILPSPQ
Trigger: CTGGGGTGACGGCAGAATTCAGAACTTCAATTTCAG...GAAGACCTTTGAGTTCAGTCTACACCTAAGCAGGTAGACATCCGCGAGGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp CACATATCCACCTGGAATCACAGAGAAGCTCACACCCAATCTGGAGAGCAAATGGGGTTGTCAGTAGGGTaGACTAATGTCACAGTGTCA +
Preference number: 4 (lower is better)
Translates to: HISTWNHREAHTQSGEQMGLSVG*TNVTVS
Trigger: TGACACTGTGACATTAGTGCACCCTACTGACAACCC...CATTTGCTCTCCAGATTGGGTGTGAGCTTCTCTGTGATTCCAGGTGGATATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp CACACACACACACGCACACACACGCACACATGTTGCAGCTCATGTCAATTTATGCAAGATGGGAAGATCTaGCAGATAACAGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: HTHTRTHTHTCCSSCQFMQDGKI*QITAGK
Trigger: CTTCCCAGCTGTTATCTGCCAGATCTTCCCATCTTG...CATAAATTGACATGAGCTGCAACATGTGTGCGTGTGTGTGCGTGTGTGTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR TCA 90 bp CAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGGGGAAATTTGTTCCTGGTCTCATCTTCACTGTaGCAAAGCATAAAGGACTTG +
Preference number: 4 (lower is better)
Translates to: QKIGKAGPKQWCWGNLFLVSSSL*QSIKDL
Trigger: CAAGTCCTTTATGCTTTGTCACAGTGAAGATGAGAC...CAGGAACAAATTTCCCCAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp TTTCCCCACATATCCACCTGGAATCACAGAGAAGCTCACACCCAATCTGGAGAGGGATGCCAAGATGTTTaGGTGTTGCATAAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: FPHISTWNHREAHTQSGEGCQDV*VLHKGR
Trigger: TCTTCCTTTATGCAACACCCAAACATCTTGGCATCC...CTCTCCAGATTGGGTGTGAGCTTCTCTGTGATTCCAGGTGGATATGTGGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp TCTGACCTCGCGGATGTCTACCTGCTTAGGTGTAGACTGAACTCAAAGGTCTTCTTGTACTGGAGGGGCTaGGCAATCTATTTATGTTCT +
Preference number: 4 (lower is better)
Translates to: SDLADVYLLRCRLNSKVFLYWRG*AIYLCS
Trigger: AGAACATAAATAGATTGCCCAGCCCCTCCAGTACAA...GAAGACCTTTGAGTTCAGTCTACACCTAAGCAGGTAGACATCCGCGAGGTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CCA 90 bp CACATATCCACCTGGAATCACAGAGAAGCTCACACCCAATCTGGAGAGCAAATGCTTTGGTTTGAAATCTaGGCTCCATCACTTGCTAGC +
Preference number: 4 (lower is better)
Translates to: HISTWNHREAHTQSGEQMLWFEI*APSLAS
Trigger: GCTAGCAAGTGATGGAGCCCAGATTTCAAACCAAAG...CATTTGCTCTCCAGATTGGGTGTGAGCTTCTCTGTGATTCCAGGTGGATATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR GCA 90 bp CACATATCCACCTGGAATCACAGAGAAGCTCACACCCAATCTGGAGAGCAAATGCACACGCACACATGTTaGAGCTCATGTCAATTTATG +
Preference number: 4 (lower is better)
Translates to: HISTWNHREAHTQSGEQMHTHTC*SSCQFM
Trigger: CATAAATTGACATGAGCTGCAACATGTGTGCGTGTG...CATTTGCTCTCCAGATTGGGTGTGAGCTTCTCTGTGATTCCAGGTGGATATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
3UTR CAA 72 bp TACACACACACACACACGCACACACACGCACACATGTaGCAGCTCATGTCAATTTATGTACAAAACAGGGAG +
Preference number: 4 (lower is better)
Translates to: YTHTHTHTHAHM*QLMSIYVQNRE
Trigger: CTCCCTGTTTTGTACATAAATTGACATGAGCTGCAACATGTGTGCGTGTGTGTGCGTGTGTGTGTGTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS GCA 90 bp GCCTCCTGCTGCAGCGCCGTCTGGCGCAGCTGCTCGGCCGTGCTCTaGAGCAGCAGCAGCTCTTCGCGCTCGCCCGGCGCAGCGCCCGCC +
Preference number: 5 (lower is better)
Translates to: ASCCSAVWRSCSAVL*SSSSSSRSPGAAPA
Trigger: GGCGGGCGCTGCGCCGGGCGAGCGCGAAGAGCTGCTGCTGCTGCAGAGCACGGCCGAGCAGCTGCGCCAGACGGCGCTGCAGCAGGAGGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS GCA 90 bp TGCGCGCCTCCTGCTGCAGCGCCGTCTGGCGCAGCTGCTCGGCCGTaGTCTGCAGCAGCAGCAGCTCTTCGCGCTCGCCCGGCGCAGCGC +
Preference number: 5 (lower is better)
Translates to: CAPPAAAPSGAAARP*SAAAAALRARPAQR
Trigger: GCGCTGCGCCGGGCGAGCGCGAAGAGCTGCTGCTGCTGCAGAGCACGGCCGAGCAGCTGCGCCAGACGGCGCTGCAGCAGGAGGCGCGCA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS TCA 90 bp CGATGCGGTCCCGCAGGGCGCGCACGGCGTCCTCCAGCTCCAGAATaGGCGCAGGCGAGTCCCAGGGCCCGTCGGCCATGGTGTCGCGGC +
Preference number: 5 (lower is better)
Translates to: RCGPAGRARRPPAPE*AQASPRARRPWCRG
Trigger: GCCGCGACACCATGGCCGACGGGCCCTGGGACTCGCCTGCGCTCATTCTGGAGCTGGAGGACGCCGTGCGCGCCCTGCGGGACCGCATCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS GCA 90 bp AGCTCACGGATGGTGTCCTGGTCGGCGCGGATGCGCGCCTCCTGCTaGAGCGCCGTCTGGCGCAGCTGCTCGGCCGTGCTCTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SSRMVSWSARMRASC*SAVWRSCSAVLCSS
Trigger: GCTGCTGCAGAGCACGGCCGAGCAGCTGCGCCAGACGGCGCTGCAGCAGGAGGCGCGCATCCGCGCCGACCAGGACACCATCCGTGAGCT
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS GCA 90 bp GTGAGCTCACGGATGGTGTCCTGGTCGGCGCGGATGCGCGCCTCCTaGTGCAGCGCCGTCTGGCGCAGCTGCTCGGCCGTGCTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: VSSRMVSWSARMRAS*CSAVWRSCSAVLCS
Trigger: GCTGCAGAGCACGGCCGAGCAGCTGCGCCAGACGGCGCTGCAGCAGGAGGCGCGCATCCGCGCCGACCAGGACACCATCCGTGAGCTCAC
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp TCTACAGCCTGTTGTGGCCCTGAAGGGGAAGCCACTGGGCCTGTTGCATGGGGGTCCAGCTGGGTGGCCTaGAGGGTCGCTCCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: STACCGPEGEATGPVAWGSSWVA*RVAPLP
Trigger: GGGGAGGGGAGCGACCCTCAAGGCCACCCAGCTGGA...CCCCCATGCAACAGGCCCAGTGGCTTCCCCTTCAGGGCCACAACAGGCTGTAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS GCA 90 bp TCAGCCACACGACCCTGCAGGACGTCCAACTCCTTTTCCACTTCCTaGCTCTGCCGGCGGCTGCTGTGGCTGAGGGCCACACGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: SATRPCRTSNSFSTS*LCRRLLWLRATRSF
Trigger: GAAGGAGCGTGTGGCCCTCAGCCACAGCAGCCGCCGGCAGAGGCAGGAAGTGGAAAAGGAGTTGGACGTCCTGCAGGGTCGTGTGGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS CCA 90 bp TGTCTTCCCAGGGAAGGACGTTGCCCAGCAGTGGCGCAGTGCAGTTaGCAATGCCCAGGACCTGGGCTGGTGTCAGGGCGTGGTCCCACA +
Preference number: 5 (lower is better)
Translates to: CLPREGRCPAVAQCS*QCPGPGLVSGRGPT
Trigger: TGTGGGACCACGCCCTGACACCAGCCCAGGTCCTGGGCATTGCCAACTGCACTGCGCCACTGCTGGGCAACGTCCTTCCCTGGGAAGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp TCTACAGCCTGTTGTGGCCCTGAAGGGGAAGCCACTGGGCCTGTTGCATGGGGGTCCCAGGGAAGGACGTaGCCCAGCAGTGGCGCAGTG +
Preference number: 5 (lower is better)
Translates to: STACCGPEGEATGPVAWGSQGRT*PSSGAV
Trigger: CACTGCGCCACTGCTGGGCAACGTCCTTCCCTGGGA...CCCCCATGCAACAGGCCCAGTGGCTTCCCCTTCAGGGCCACAACAGGCTGTAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp TCTACAGCCTGTTGTGGCCCTGAAGGGGAAGCCACTGGGCCTGTTGCATGGGGGGGCCTCCTGGGGTCTTaGTCCCCTTCCCTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: STACCGPEGEATGPVAWGGLLGS*SPSLQA
Trigger: AGCCTGGAGGGAAGGGGACAAAGACCCCAGGAGGCC...CCCCCATGCAACAGGCCCAGTGGCTTCCCCTTCAGGGCCACAACAGGCTGTAGA
64% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp CAGAGGTGGGGTCTCCTGGGCCATGAGGCCTCTACCTTAGGGCTGCTCCCAGCCCAACTGGTGCAGGGCTaGGCCCCAAGCAAGAGTTGG +
Preference number: 5 (lower is better)
Translates to: QRWGLLGHEASTLGLLPAQLVQG*APSKSW
Trigger: CCAACTCTTGCTTGGGGCCAAGCCCTGCACCAGTTG...GGCTGGGAGCAGCCCTAAGGTAGAGGCCTCATGGCCCAGGAGACCCCACCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS GCA 90 bp CCAACTTGTCTTCCCAGGGAAGGACGTTGCCCAGCAGTGGCGCAGTaGAGTTGGCAATGCCCAGGACCTGGGCTGGTGTCAGGGCGTGGT +
Preference number: 5 (lower is better)
Translates to: PTCLPREGRCPAVAQ*SWQCPGPGLVSGRG
Trigger: ACCACGCCCTGACACCAGCCCAGGTCCTGGGCATTGCCAACTGCACTGCGCCACTGCTGGGCAACGTCCTTCCCTGGGAAGACAAGTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS CCA 90 bp GGCCTCCACCAACTTGTCTTCCCAGGGAAGGACGTTGCCCAGCAGTaGCGCAGTGCAGTTGGCAATGCCCAGGACCTGGGCTGGTGTCAG +
Preference number: 5 (lower is better)
Translates to: GLHQLVFPGKDVAQQ*RSAVGNAQDLGWCQ
Trigger: CTGACACCAGCCCAGGTCCTGGGCATTGCCAACTGCACTGCGCCACTGCTGGGCAACGTCCTTCCCTGGGAAGACAAGTTGGTGGAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp ACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGGAACTCAGAGGCGACCGAAGCATaGTCGGCGCCGCCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: TSGAMVPRWHSTQVSGNSEATEA*SAPPGS
Trigger: GCTGCCCGGCGGCGCCGACAATGCTTCGGTCGCCTC...TGAGTTCCCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp GTGACTAGCAGGGGAGGGACACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGGCTCCCACTGTTCACTaGAGACGCTCCTCCCCACTC +
Preference number: 5 (lower is better)
Translates to: VTSRGGTPQLSILPKRPGAPTVH*RRSSPL
Trigger: GAGTGGGGAGGAGCGTCTCAAGTGAACAGTGGGAGC...CCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGTGTCCCTCCCCTGCTAGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp ACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGATCATAACCTCCTCCCCGCAAAGCCACTGGGCCTGTaGCATGGGGGACAAGGGGGC +
Preference number: 5 (lower is better)
Translates to: TSALHSAEAPRDHNLLPAKPLGL*HGGQGG
Trigger: GCCCCCTTGTCCCCCATGCAACAGGCCCAGTGGCTT...TGCGGGGAGGAGGTTATGATCCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp CTCCAGTGCAGTGCCAGGTGGGCAGGCTCCCACTGTTCACTTGAGACGCTCCTCGGGTGCCAGGCTGGGTaGATCCAAAGGGAGCTGGTT +
Preference number: 5 (lower is better)
Translates to: LQCSARWAGSHCSLETLLGCQAG*IQRELV
Trigger: AACCAGCTCCCTTTGGATCAACCCAGCCTGGCACCC...GAGGAGCGTCTCAAGTGAACAGTGGGAGCCTGCCCACCTGGCACTGCACTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp CAGAGGTGGGGTCTCCTGGGCCATGAGGCCTCTACCTTAGGGCTGCTCCCAGCCGCACAGGAACAAGGCTaGGACGTCAGAGGTCTCATC +
Preference number: 5 (lower is better)
Translates to: QRWGLLGHEASTLGLLPAAQEQG*DVRGLI
Trigger: GATGAGACCTCTGACGTCCAAGCCTTGTTCCTGTGC...GGCTGGGAGCAGCCCTAAGGTAGAGGCCTCATGGCCCAGGAGACCCCACCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS CCA 90 bp GCAGTGCAGTTGGCAATGCCCAGGACCTGGGCTGGTGTCAGGGCGTaGTCCCACAGGTTAAACTGGGCAATGTCACCGACAAAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: AVQLAMPRTWAGVRA*SHRLNWAMSPTKAW
Trigger: CCAGGCCTTTGTCGGTGACATTGCCCAGTTTAACCTGTGGGACCACGCCCTGACACCAGCCCAGGTCCTGGGCATTGCCAACTGCACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp TCTACAGCCTGTTGTGGCCCTGAAGGGGAAGCCACTGGGCCTGTTGCATGGGGGGTCCAAGTCCTGTCCTaGGCATGGAGGGAGAGCGAT +
Preference number: 5 (lower is better)
Translates to: STACCGPEGEATGPVAWGVQVLS*AWRESD
Trigger: ATCGCTCTCCCTCCATGCCAAGGACAGGACTTGGAC...CCCCCATGCAACAGGCCCAGTGGCTTCCCCTTCAGGGCCACAACAGGCTGTAGA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp AGGGGTCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGCAGTACAATCTCGTaGGCCTGCCCGGGCACTGAG +
Preference number: 5 (lower is better)
Translates to: RGRNTSGAMVPRWHSTQVSSTIS*ACPGTE
Trigger: CTCAGTGCCCGGGCAGGCCAACGAGATTGTACTGCT...CACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp TGGTGGGGGCACCACATGCCACAAGATGGGAAGATCTGGCAGATAACAGCTGGGGGCAGCTGGGCCACCTaGTCGTTGATCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: WWGHHMPQDGKIWQITAGGSWAT*SLISSS
Trigger: GGAGCTGCTGATCAACGACAAGGTGGCCCAGCTGCC...CCCAGCTGTTATCTGCCAGATCTTCCCATCTTGTGGCATGTGGTGCCCCCACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp CAGAGGTGGGGTCTCCTGGGCCATGAGGCCTCTACCTTAGGGCTGCTCCCAGCCGATTCTGACACTCTCTaGGGGAAGCTGGTGATGACT +
Preference number: 5 (lower is better)
Translates to: QRWGLLGHEASTLGLLPADSDTL*GKLVMT
Trigger: AGTCATCACCAGCTTCCCCAAGAGAGTGTCAGAATC...GGCTGGGAGCAGCCCTAAGGTAGAGGCCTCATGGCCCAGGAGACCCCACCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp ATGTGCTCAGGGGCAGCAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGGGTCCCCTTGGGATGTaGGTGGGGGCACCACATGCC +
Preference number: 5 (lower is better)
Translates to: MCSGAAEDRKSGTQTVVLGPLGM*VGAPHA
Trigger: GGCATGTGGTGCCCCCACCAACATCCCAAGGGGACC...CAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTGCTGCCCCTGAGCACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS GCA 90 bp TCATGCCTTGGCCCTCCCCTTGCAGACATCGAAGGCAGCCTTTGTTaGACCCCCAAAGGCCTCCACCAACTTGTCTTCCCAGGGAAGGAC +
Preference number: 5 (lower is better)
Translates to: SCLGPPLADIEGSLC*TPKGLHQLVFPGKD
Trigger: GTCCTTCCCTGGGAAGACAAGTTGGTGGAGGCCTTTGGGGGTGCAACAAAGGCTGCCTTCGATGTCTGCAAGGGGAGGGCCAAGGCATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp CTCCAGTGCAGTGCCAGGTGGGCAGGCTCCCACTGTTCACTTGAGACGCTCCTCATGGGGATGCTGATCTaGAAGGCATCTGGAGGACTG +
Preference number: 5 (lower is better)
Translates to: LQCSARWAGSHCSLETLLMGMLI*KASGGL
Trigger: CAGTCCTCCAGATGCCTTCAAGATCAGCATCCCCAT...GAGGAGCGTCTCAAGTGAACAGTGGGAGCCTGCCCACCTGGCACTGCACTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp AGATCAACAGGACGGTGCCTGTGCCACACTCAGTGCAGTGCCAGATGGCAGGACACCATAGGCCATCCCTaGTGGTCCAGGCGATGCAGA +
Preference number: 5 (lower is better)
Translates to: RSTGRCLCHTQCSARWQDTIGHP*WSRRCR
Trigger: TCTGCATCGCCTGGACCACAAGGGATGGCCTATGGT...GTCCTGCCATCTGGCACTGCACTGAGTGTGGCACAGGCACCGTCCTGTTGATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp TGGTGGGGGCACCACATGCCACAAGATGGGAAGATCTGGCAGATAACAGCTGGGTCTTTCCCTGTCTGCTaGGATGTGCTCAGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: WWGHHMPQDGKIWQITAGSFPVC*DVLRGS
Trigger: GCTGCCCCTGAGCACATCCAAGCAGACAGGGAAAGA...CCCAGCTGTTATCTGCCAGATCTTCCCATCTTGTGGCATGTGGTGCCCCCACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp AGATCAACAGGACGGTGCCTGTGCCACACTCAGTGCAGTGCCAGATGGCAGGACAAGGCTGGGGAGGGGTaGTCAGTAGGGTGCACTAAT +
Preference number: 5 (lower is better)
Translates to: RSTGRCLCHTQCSARWQDKAGEG*SVGCTN
Trigger: ATTAGTGCACCCTACTGACAACCCCTCCCCAGCCTT...GTCCTGCCATCTGGCACTGCACTGAGTGTGGCACAGGCACCGTCCTGTTGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp ACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGGAACTCATGGGGTTTCACCACGTaGGCCAGGCTGACTTCGAAC +
Preference number: 5 (lower is better)
Translates to: TSGAMVPRWHSTQVSGNSWGFTT*ARLTSN
Trigger: GTTCGAAGTCAGCCTGGCCAACGTGGTGAAACCCCA...TGAGTTCCCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp ACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGATCATAACCTCCTCCCCGCATGTAAAATGAGGGCTTaGGCCTCTTCTCAGAGCCCT +
Preference number: 5 (lower is better)
Translates to: TSALHSAEAPRDHNLLPACKMRA*ASSQSP
Trigger: AGGGCTCTGAGAAGAGGCCAAAGCCCTCATTTTACA...TGCGGGGAGGAGGTTATGATCCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp CACACACACACACGCACACACACGCACACATGTTGCAGCTCATGTCAATTTATGGCCTTGGCCCTCCCCTaGCAGACATCGAAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: HTHTRTHTHTCCSSCQFMALALP*QTSKAA
Trigger: GGCTGCCTTCGATGTCTGCAAGGGGAGGGCCAAGGC...CATAAATTGACATGAGCTGCAACATGTGTGCGTGTGTGTGCGTGTGTGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp ATGTGCTCAGGGGCAGCAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGTTTCTTCCAGTGGGATaGTACTGGAGGGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: MCSGAAEDRKSGTQTVVLFLPVG*YWRGWA
Trigger: TGCCCAGCCCCTCCAGTACAATCCCACTGGAAGAAA...CAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTGCTGCCCCTGAGCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp ACTGGTGCAGGGCTTGGCCCCAAGCAAGAGTTGGAGAAGCAGCAATTTCCCTCCGACCCAGCACTTGGGTaGATGTCTTTGGCTGTTACC +
Preference number: 5 (lower is better)
Translates to: TGAGLGPKQELEKQQFPSDPALG*MSLAVT
Trigger: GGTAACAGCCAAAGACATCAACCCAAGTGCTGGGTC...GGAGGGAAATTGCTGCTTCTCCAACTCTTGCTTGGGGCCAAGCCCTGCACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp AGGGGTCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGCAAAGCATAAAGGACTaGGGGTTGAGCGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: RGRNTSGAMVPRWHSTQVQSIKD*GLSVCV
Trigger: CACACACACGCTCAACCCCAAGTCCTTTATGCTTTG...CACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp ACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGATCATAACCTCCTCCCCGCATGGTGCTGGGGAAATTaGTTCCTGTTCCCTTTGGAA +
Preference number: 5 (lower is better)
Translates to: TSALHSAEAPRDHNLLPAWCWGN*FLFPLE
Trigger: TTCCAAAGGGAACAGGAACAAATTTCCCCAGCACCA...TGCGGGGAGGAGGTTATGATCCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp CACATATCCACCTGGAATCACAGAGAAGCTCACACCCAATCTGGAGAGCAAATGTCCAGCTGGTCCATCTaGGAGTGTAGGCCGGTGGGC +
Preference number: 5 (lower is better)
Translates to: HISTWNHREAHTQSGEQMSSWSI*ECRPVG
Trigger: GCCCACCGGCCTACACTCCAAGATGGACCAGCTGGA...CATTTGCTCTCCAGATTGGGTGTGAGCTTCTCTGTGATTCCAGGTGGATATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp CAGCAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGGGGAAATTTGTTCAAGGCCTCCACCAACTaGTCTTCCCAGGGAAGGACG +
Preference number: 5 (lower is better)
Translates to: QQKIGKAGPKQWCWGNLFKASTN*SSQGRT
Trigger: CGTCCTTCCCTGGGAAGACAAGTTGGTGGAGGCCTT...GAACAAATTTCCCCAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp CACACACACACACGCACACACACGCACACATGTTGCAGCTCATGTCAATTTATGGTGGTGGCAAGGGGATaGGTCCCCTTGGGATGTTGG +
Preference number: 5 (lower is better)
Translates to: HTHTRTHTHTCCSSCQFMVVARG*VPLGCW
Trigger: CCAACATCCCAAGGGGACCAATCCCCTTGCCACCAC...CATAAATTGACATGAGCTGCAACATGTGTGCGTGTGTGTGCGTGTGTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp ACCTCAGCTCTCCATTCTGCCGAAGCGCCCAGGGATCATAACCTCCTCCCCGCACAAGATGTTTGGGTGTaGCATAAAGGAAGATGTTCA +
Preference number: 5 (lower is better)
Translates to: TSALHSAEAPRDHNLLPAQDVWV*HKGRCS
Trigger: TGAACATCTTCCTTTATGCAACACCCAAACATCTTG...TGCGGGGAGGAGGTTATGATCCCTGGGCGCTTCGGCAGAATGGAGAGCTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp AGATCAACAGGACGGTGCCTGTGCCACACTCAGTGCAGTGCCAGATGGCAGGACAGAAACACATCAAGCTaGGCGTCACTGAAATTGAAG +
Preference number: 5 (lower is better)
Translates to: RSTGRCLCHTQCSARWQDRNTSS*ASLKLK
Trigger: CTTCAATTTCAGTGACGCCAAGCTTGATGTGTTTCT...GTCCTGCCATCTGGCACTGCACTGAGTGTGGCACAGGCACCGTCCTGTTGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp ACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGGAACTCAACAGTGTCAGACAACTaGACATGCTCACTCACACTC +
Preference number: 5 (lower is better)
Translates to: TSGAMVPRWHSTQVSGNSTVSDN*TCSLTL
Trigger: GAGTGTGAGTGAGCATGTCAAGTTGTCTGACACTGT...TGAGTTCCCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp CAGAAGATAGGAAAAGCGGGACCCAAACAGTGGTGCTGGGGAAATTTGTTCCTGCTTGGGTTGATGTCTTaGGCTGTTACCGTGGCAACC +
Preference number: 5 (lower is better)
Translates to: QKIGKAGPKQWCWGNLFLLGLMS*AVTVAT
Trigger: GGTTGCCACGGTAACAGCCAAAGACATCAACCCAAG...CAGGAACAAATTTCCCCAGCACCACTGTTTGGGTCCCGCTTTTCCTATCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS-3UTR CAA 90 bp TCGGAACACGTCTGGAGCAATGGTGCCCAGATGGCACTCTACACAGGTGAGTGGACACACGCACACATGTaGCAGCTCATGTCAATTTAT +
Preference number: 5 (lower is better)
Translates to: SEHVWSNGAQMALYTGEWTHAHM*QLMSIY
Trigger: ATAAATTGACATGAGCTGCAACATGTGTGCGTGTGT...CCACTCACCTGTGTAGAGTGCCATCTGGGCACCATTGCTCCAGACGTGTTCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS TCA 72 bp GGCAGGCAGCAGCCAGCGGCGTGCACAGGAAGCGGCTaGACAGGGGCCCGGGCGGCAGCGGGTGCGCGCTGG +
Preference number: 6 (lower is better)
Translates to: GRQQPAACTGSG*TGARAAAGARW
Trigger: CCAGCGCGCACCCGCTGCCGCCCGGGCCCCTGTTCAGCCGCTTCCTGTGCACGCCGCTGGCTGCTGCCTGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS GCA 72 bp CGGATGGTGTCCTGGTCGGCGCGGATGCGCGCCTCCTaGTGCAGCGCCGTCTGGCGCAGCTGCTCGGCCGTG +
Preference number: 6 (lower is better)
Translates to: RMVSWSARMRAS*CSAVWRSCSAV
Trigger: CACGGCCGAGCAGCTGCGCCAGACGGCGCTGCAGCAGGAGGCGCGCATCCGCGCCGACCAGGACACCATCCG
75% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS CCA 72 bp TCGGCGCGGATGCGCGCCTCCTGCTGCAGCGCCGTCTaGCGCAGCTGCTCGGCCGTGCTCTGCAGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: SARMRASCCSAV*RSCSAVLCSSS
Trigger: GCTGCTGCTGCAGAGCACGGCCGAGCAGCTGCGCCAGACGGCGCTGCAGCAGGAGGCGCGCATCCGCGCCGA
75% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS GCA 72 bp ATGGTGTCCTGGTCGGCGCGGATGCGCGCCTCCTGCTaGAGCGCCGTCTGGCGCAGCTGCTCGGCCGTGCTC +
Preference number: 6 (lower is better)
Translates to: MVSWSARMRASC*SAVWRSCSAVL
Trigger: GAGCACGGCCGAGCAGCTGCGCCAGACGGCGCTGCAGCAGGAGGCGCGCATCCGCGCCGACCAGGACACCAT
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS TCA 72 bp TTTCCACTTCCTGCCTCTGCCGGCGGCTGCTGTGGCTaGGGGCCACACGCTCCTTCTCCAGTGCCAGCACCT +
Preference number: 6 (lower is better)
Translates to: FPLPASAGGCCG*GPHAPSPVPAP
Trigger: AGGTGCTGGCACTGGAGAAGGAGCGTGTGGCCCTCAGCCACAGCAGCCGCCGGCAGAGGCAGGAAGTGGAAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS CCA 72 bp AGGGAAGGACGTTGCCCAGCAGTGGCGCAGTGCAGTTaGCAATGCCCAGGACCTGGGCTGGTGTCAGGGCGT +
Preference number: 6 (lower is better)
Translates to: REGRCPAVAQCS*QCPGPGLVSGR
Trigger: ACGCCCTGACACCAGCCCAGGTCCTGGGCATTGCCAACTGCACTGCGCCACTGCTGGGCAACGTCCTTCCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS GCA 72 bp CTTCCCAGGGAAGGACGTTGCCCAGCAGTGGCGCAGTaGAGTTGGCAATGCCCAGGACCTGGGCTGGTGTCA +
Preference number: 6 (lower is better)
Translates to: LPREGRCPAVAQ*SWQCPGPGLVS
Trigger: TGACACCAGCCCAGGTCCTGGGCATTGCCAACTGCACTGCGCCACTGCTGGGCAACGTCCTTCCCTGGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS CCA 72 bp TGGCGCAGTGCAGTTGGCAATGCCCAGGACCTGGGCTaGTGTCAGGGCGTGGTCCCACAGGTTAAACTGGGC +
Preference number: 6 (lower is better)
Translates to: WRSAVGNAQDLG*CQGVVPQVKLG
Trigger: GCCCAGTTTAACCTGTGGGACCACGCCCTGACACCAGCCCAGGTCCTGGGCATTGCCAACTGCACTGCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS GCA 72 bp GCTGAGGACCCGTGCTCCAGCTCAGCCACACGACCCTaGAGGACGTCCAACTCCTTTTCCACTTCCTGCCTC +
Preference number: 6 (lower is better)
Translates to: AEDPCSSSATRP*RTSNSFSTSCL
Trigger: GAGGCAGGAAGTGGAAAAGGAGTTGGACGTCCTGCAGGGTCGTGTGGCTGAGCTGGAGCACGGGTCCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS CCA 72 bp CAACTTGTCTTCCCAGGGAAGGACGTTGCCCAGCAGTaGCGCAGTGCAGTTGGCAATGCCCAGGACCTGGGC +
Preference number: 6 (lower is better)
Translates to: QLVFPGKDVAQQ*RSAVGNAQDLG
Trigger: GCCCAGGTCCTGGGCATTGCCAACTGCACTGCGCCACTGCTGGGCAACGTCCTTCCCTGGGAAGACAAGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS CCA 72 bp CATAGGCCATCCCTTGTGGTCCAGGCGATGCAGATGTaGTGCCAGCCATTGTCCTTCAGGCTCAGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: HRPSLVVQAMQM*CQPLSFRLRGS
Trigger: GCTGCCCCTGAGCCTGAAGGACAATGGCTGGCACCACATCTGCATCGCCTGGACCACAAGGGATGGCCTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS CAA 72 bp AAGGCCTCCACCAACTTGTCTTCCCAGGGAAGGACGTaGCCCAGCAGTGGCGCAGTGCAGTTGGCAATGCCC +
Preference number: 6 (lower is better)
Translates to: KASTNLSSQGRT*PSSGAVQLAMP
Trigger: GGGCATTGCCAACTGCACTGCGCCACTGCTGGGCAACGTCCTTCCCTGGGAAGACAAGTTGGTGGAGGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS CAA 72 bp GCAGCCTTTGTTGCACCCCCAAAGGCCTCCACCAACTaGTCTTCCCAGGGAAGGACGTTGCCCAGCAGTGGC +
Preference number: 6 (lower is better)
Translates to: AAFVAPPKASTN*SSQGRTLPSSG
Trigger: GCCACTGCTGGGCAACGTCCTTCCCTGGGAAGACAAGTTGGTGGAGGCCTTTGGGGGTGCAACAAAGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS GCA 72 bp GGCCCTCCCCTTGCAGACATCGAAGGCAGCCTTTGTTaGACCCCCAAAGGCCTCCACCAACTTGTCTTCCCA +
Preference number: 6 (lower is better)
Translates to: GPPLADIEGSLC*TPKGLHQLVFP
Trigger: TGGGAAGACAAGTTGGTGGAGGCCTTTGGGGGTGCAACAAAGGCTGCCTTCGATGTCTGCAAGGGGAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333039.4
CDS CCA 72 bp TTGGCAATGCCCAGGACCTGGGCTGGTGTCAGGGCGTaGTCCCACAGGTTAAACTGGGCAATGTCACCGACA +
Preference number: 6 (lower is better)
Translates to: LAMPRTWAGVRA*SHRLNWAMSPT
Trigger: TGTCGGTGACATTGCCCAGTTTAACCTGTGGGACCACGCCCTGACACCAGCCCAGGTCCTGGGCATTGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333039.4